BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038172
(323 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296081197|emb|CBI18223.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 612 bits (1579), Expect = e-173, Method: Compositional matrix adjust.
Identities = 289/307 (94%), Positives = 303/307 (98%)
Query: 17 QRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI 76
+RRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI
Sbjct: 57 RRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI 116
Query: 77 VRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRR 136
VR+VEKPGSKLHKKETCEAVTI+ETPPM++VGVV YVKTPRGLRSLNTVWAQHLSEEV+R
Sbjct: 117 VREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKR 176
Query: 137 RFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQ 196
RFYKNWCKSKKKAFTKYSKQYET+EGKKSIQAQLEK+KKYASV+RVLAHTQIRKMKGLKQ
Sbjct: 177 RFYKNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQ 236
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
KKAHLMEIQVNGGTIA+KVDYAYGFFEKQ+PVDA+FQKDEMIDIIGVTKGKGYEGVVTRW
Sbjct: 237 KKAHLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRW 296
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK QESH
Sbjct: 297 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESH 356
Query: 317 TGITEFD 323
T +TEFD
Sbjct: 357 TALTEFD 363
>gi|225460636|ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
Length = 397
Score = 612 bits (1577), Expect = e-173, Method: Compositional matrix adjust.
Identities = 289/307 (94%), Positives = 303/307 (98%)
Query: 17 QRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI 76
+RRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI
Sbjct: 5 RRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI 64
Query: 77 VRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRR 136
VR+VEKPGSKLHKKETCEAVTI+ETPPM++VGVV YVKTPRGLRSLNTVWAQHLSEEV+R
Sbjct: 65 VREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKR 124
Query: 137 RFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQ 196
RFYKNWCKSKKKAFTKYSKQYET+EGKKSIQAQLEK+KKYASV+RVLAHTQIRKMKGLKQ
Sbjct: 125 RFYKNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQ 184
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
KKAHLMEIQVNGGTIA+KVDYAYGFFEKQ+PVDA+FQKDEMIDIIGVTKGKGYEGVVTRW
Sbjct: 185 KKAHLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRW 244
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK QESH
Sbjct: 245 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESH 304
Query: 317 TGITEFD 323
T +TEFD
Sbjct: 305 TALTEFD 311
>gi|313586459|gb|ADR71240.1| 60S ribosomal protein L3B [Hevea brasiliensis]
Length = 389
Score = 605 bits (1560), Expect = e-171, Method: Compositional matrix adjust.
Identities = 285/303 (94%), Positives = 300/303 (99%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPPM++VGVVGYVKTPRGLR+LNTVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSKQYETD+GKKSIQAQLEKIKKYA VVRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDDGKKSIQAQLEKIKKYAHVVRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVD+AYGFFEKQIP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK GQESHT IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHTAIT 300
Query: 321 EFD 323
++D
Sbjct: 301 DYD 303
>gi|147833564|emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera]
Length = 389
Score = 605 bits (1560), Expect = e-171, Method: Compositional matrix adjust.
Identities = 286/303 (94%), Positives = 299/303 (98%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPPM++VGVV YVKTPRGLRSLNTVWAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSKQYET+EGKKSIQAQLEK+KKYASV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVDYAYGFFEKQ+PVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK QESHT +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|313586457|gb|ADR71239.1| 60S ribosomal protein L3A [Hevea brasiliensis]
Length = 389
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 285/303 (94%), Positives = 300/303 (99%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPPM++VGVVGYVKTPRGLR+LNTVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSKQYETD+GKKSIQAQLEKIKKYA VVRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDDGKKSIQAQLEKIKKYAHVVRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVD+AYGFFEKQIP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK GQESHT IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHTAIT 300
Query: 321 EFD 323
++D
Sbjct: 301 DYD 303
>gi|255566636|ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3, putative [Ricinus communis]
Length = 389
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 281/303 (92%), Positives = 300/303 (99%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+R RGKVKAFPKDDP+KPC+LTAFLGYKAGMTHI+R+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRQRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIMREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPPM++VGVVGYVKTPRGLRSLNTVWAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYS+Q ET+EGKKSIQAQLEK+KKYA+V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSRQLETEEGKKSIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVD+AYGFFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGKGGQESHT IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKGGQESHTAIT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|82623411|gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]
Length = 389
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 281/303 (92%), Positives = 297/303 (98%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPPM++VGVVGYVKTPRGLR LNTVWAQHLSE+++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAF KYSK+YETDEGKK IQAQLEK+KKYA V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KVD+AYGFFEKQ+PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK GQESHT +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTAVT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|350539715|ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum]
gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum lycopersicum]
Length = 389
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 281/303 (92%), Positives = 297/303 (98%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPPM++VGVVGYVKTPRGLR LNTVWAQHLSE+++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAF KYSK+YETDEGKK IQAQLEK+KKYA V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KVD+AYGFFEKQ+PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK GQESHT +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTALT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|224066623|ref|XP_002302168.1| predicted protein [Populus trichocarpa]
gi|118483469|gb|ABK93633.1| unknown [Populus trichocarpa]
gi|222843894|gb|EEE81441.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 277/303 (91%), Positives = 298/303 (98%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDP+KPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPNKPCKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPPM++VGVVGY+KTP GLR+LNTVWAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYLKTPSGLRTLNTVWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKK+AF KYSKQYETDEGKKSIQ+QLEK+KKYA+V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKRAFNKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVD+AYGFFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGK GQE HT IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKTGQECHTAIT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|37625023|gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
Length = 389
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 279/303 (92%), Positives = 295/303 (97%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPPM++VGVVGYVKTPRGLR LNTVWAQHLSEE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAF KYSK+YE+DEGKK IQ QLEK+KKYA V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVD+AYGFFEKQ+PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYKLGK GQESH +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKLGKAGQESHAAVT 300
Query: 321 EFD 323
+FD
Sbjct: 301 DFD 303
>gi|224082478|ref|XP_002306708.1| predicted protein [Populus trichocarpa]
gi|118481111|gb|ABK92509.1| unknown [Populus trichocarpa]
gi|222856157|gb|EEE93704.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 274/303 (90%), Positives = 299/303 (98%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDP+KPC+LT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPTKPCKLTSFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPPM++VGVVGY+KTP GLR+LNTVWAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYLKTPSGLRTLNTVWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAF KYSKQYETDEGKKSIQ+QLEK+KKYA+V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVD+AYGFFEKQ+P+DAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YK+GK GQE+HT IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKVGQETHTAIT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|449441226|ref|XP_004138383.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
gi|449499176|ref|XP_004160742.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
Length = 389
Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust.
Identities = 280/303 (92%), Positives = 295/303 (97%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDD +KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIETPPM++VGVVGYVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAF KYSKQYETDEGKK+IQ +LEK+KKYASV+RVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KVDYAYGFFEKQ+PV+AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK GQESHT IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|356576067|ref|XP_003556156.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
Length = 389
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 276/303 (91%), Positives = 296/303 (97%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSK +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIETPPM++VGVVGYVKTPRGLR+LNTVWAQHLSEE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSKQYET+EGKK+I+AQLEK+KKYA+VVRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTIA+KVD+AY FFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKVYKLGK G ESH+ +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|356535772|ref|XP_003536417.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
Length = 389
Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust.
Identities = 275/303 (90%), Positives = 296/303 (97%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSK +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIETPPM++VGVVGYVKTPRGLR+LNTVWAQHLSEE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSKQYET+EGKK+I+AQLEK+KKYA+VVRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGG+IA+KVD+AY FFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGSIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKVYKLGK G ESH+ +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|255642195|gb|ACU21362.1| unknown [Glycine max]
Length = 389
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/303 (90%), Positives = 295/303 (97%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSK +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIETPPM++VGVVGYVKTPRGLR+LNTVWAQHLSEE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSKQYET+EGKK+I+AQLEK+KKYA+VVRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTIA+KVD+AY F EKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYSFLEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKVYKLGK G ESH+ +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|359486157|ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis vinifera]
gi|297739519|emb|CBI29701.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 277/303 (91%), Positives = 297/303 (98%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+ PCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTNPCRLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPPM+VVGVVGY+KTPRGLRSLNTVWAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSK+YE+++GKK IQAQLEK+KKY +V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG +A+KVDYAYGFFEKQIP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK GQESH+ +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|125535904|gb|EAY82392.1| hypothetical protein OsI_37606 [Oryza sativa Indica Group]
Length = 733
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 269/307 (87%), Positives = 294/307 (95%)
Query: 17 QRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI 76
+RR+MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FPKDD SKPC LT+F+GYKAGMTHI
Sbjct: 341 RRRKMSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHI 400
Query: 77 VRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRR 136
VR+VEKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLRSLN+VWAQHLSEEVRR
Sbjct: 401 VREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRR 460
Query: 137 RFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQ 196
RFYKNWCKSKKKAFTKY+ +Y++D GKK IQ QLEK+KKYAS+VRV+AHTQIRKMKGLKQ
Sbjct: 461 RFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQ 520
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
KKAHLMEIQ+NGGTIA+KVDY Y FFEK+IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW
Sbjct: 521 KKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 580
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
GVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQESH
Sbjct: 581 GVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESH 640
Query: 317 TGITEFD 323
TEFD
Sbjct: 641 AACTEFD 647
>gi|147865994|emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]
Length = 389
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 277/303 (91%), Positives = 297/303 (98%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFL RKRAARHRGKVKAFPKDDP+KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLXRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPPM+VVGVVGY+KTPRGLRSLNTVWAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSK+YE+++GKK IQAQLEK+KKY +V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG +A+KVDYAYGFFEKQIP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK GQESH+ +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|37625025|gb|AAQ96336.1| ribosomal protein L3B [Nicotiana tabacum]
Length = 409
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/323 (84%), Positives = 291/323 (90%), Gaps = 20/323 (6%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDD +KPCRLTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDTTKPCRLTAFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIETPPM+VVGVVGYVKTPRGLR L+TVWAQHLSEE++RRFYK
Sbjct: 61 EKPGSKLHKKETCELVTIIETPPMIVVGVVGYVKTPRGLRCLSTVWAQHLSEEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETD--------------------EGKKSIQAQLEKIKKYASVV 180
NWC SKKKAF KYSK+YETD +GKK I AQLEK+KKY V+
Sbjct: 121 NWCMSKKKAFAKYSKKYETDNWCMSKKKAFAKYSKKYETDDGKKDINAQLEKMKKYCCVI 180
Query: 181 RVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDI 240
RVLAHTQIRKMKGLKQKKAHLMEIQVNGG +++KVDYAYGFFEKQIPVDA+FQKDEMIDI
Sbjct: 181 RVLAHTQIRKMKGLKQKKAHLMEIQVNGGDVSQKVDYAYGFFEKQIPVDAIFQKDEMIDI 240
Query: 241 IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE 300
IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE
Sbjct: 241 IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTE 300
Query: 301 MNKKVYKLGKGGQESHTGITEFD 323
+NKKVY+LGK GQESH+ ITEFD
Sbjct: 301 LNKKVYRLGKAGQESHSAITEFD 323
>gi|115487526|ref|NP_001066250.1| Os12g0167900 [Oryza sativa Japonica Group]
gi|548770|sp|P35684.2|RL3_ORYSJ RecName: Full=60S ribosomal protein L3
gi|303853|dbj|BAA02155.1| ribosomal protein L3 [Oryza sativa Japonica Group]
gi|77553113|gb|ABA95909.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa
Japonica Group]
gi|113648757|dbj|BAF29269.1| Os12g0167900 [Oryza sativa Japonica Group]
gi|125578626|gb|EAZ19772.1| hypothetical protein OsJ_35352 [Oryza sativa Japonica Group]
gi|146141390|tpg|DAA01059.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica
cultivar-group)]
gi|146141404|tpg|DAA01151.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica
cultivar-group)]
gi|215686363|dbj|BAG87624.1| unnamed protein product [Oryza sativa Japonica Group]
gi|403081497|gb|AFR23065.1| hypothetical protein [Oryza sativa]
Length = 389
Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust.
Identities = 267/303 (88%), Positives = 290/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FPKDD SKPC LT+F+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLRSLN+VWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y++D GKK IQ QLEK+KKYAS+VRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTIA+KVDY Y FFEK+IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQESH T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|414587228|tpg|DAA37799.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
Length = 307
Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust.
Identities = 267/303 (88%), Positives = 289/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +YE D GKK IQ QLEK+KKYASV+RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVDY Y FFEK++PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|194693910|gb|ACF81039.1| unknown [Zea mays]
gi|194702010|gb|ACF85089.1| unknown [Zea mays]
gi|195606812|gb|ACG25236.1| 60S ribosomal protein L3 [Zea mays]
gi|195619674|gb|ACG31667.1| 60S ribosomal protein L3 [Zea mays]
gi|195626206|gb|ACG34933.1| 60S ribosomal protein L3 [Zea mays]
gi|195641988|gb|ACG40462.1| 60S ribosomal protein L3 [Zea mays]
gi|414587226|tpg|DAA37797.1| TPA: 60S ribosomal protein L3 isoform 1 [Zea mays]
gi|414587227|tpg|DAA37798.1| TPA: 60S ribosomal protein L3 isoform 2 [Zea mays]
gi|414587235|tpg|DAA37806.1| TPA: 60S ribosomal protein L3 isoform 1 [Zea mays]
gi|414587236|tpg|DAA37807.1| TPA: 60S ribosomal protein L3 isoform 2 [Zea mays]
gi|414588487|tpg|DAA39058.1| TPA: 60S ribosomal protein L3 isoform 1 [Zea mays]
gi|414588488|tpg|DAA39059.1| TPA: 60S ribosomal protein L3 isoform 2 [Zea mays]
gi|414588489|tpg|DAA39060.1| TPA: 60S ribosomal protein L3 isoform 3 [Zea mays]
gi|414588495|tpg|DAA39066.1| TPA: 60S ribosomal protein L3 [Zea mays]
Length = 389
Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust.
Identities = 267/303 (88%), Positives = 289/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +YE D GKK IQ QLEK+KKYASV+RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVDY Y FFEK++PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|116783991|gb|ABK23172.1| unknown [Picea sitchensis]
Length = 389
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 261/303 (86%), Positives = 291/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVT+IETPPM++VGVVGY+KTPRGLR+LN VWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTLIETPPMVIVGVVGYIKTPRGLRTLNAVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW ++KKKAFTKY+K+Y+++EGKK IQ +LEK+KKYA+V+RVLAHTQI+KMKGLKQ KAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKEIQTELEKMKKYATVIRVLAHTQIKKMKGLKQNKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+ +KVDYAY FFEKQ+P+DA+FQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVPQKVDYAYNFFEKQVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK QESH +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKKDQESHNAMT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|115484365|ref|NP_001065844.1| Os11g0168200 [Oryza sativa Japonica Group]
gi|62701923|gb|AAX92996.1| ribosomal protein L3, putative [Oryza sativa Japonica Group]
gi|62734368|gb|AAX96477.1| ribosomal protein L3, putative [Oryza sativa Japonica Group]
gi|77548788|gb|ABA91585.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa
Japonica Group]
gi|113644548|dbj|BAF27689.1| Os11g0168200 [Oryza sativa Japonica Group]
gi|125533541|gb|EAY80089.1| hypothetical protein OsI_35258 [Oryza sativa Indica Group]
gi|125576343|gb|EAZ17565.1| hypothetical protein OsJ_33102 [Oryza sativa Japonica Group]
gi|146141406|tpg|DAA01152.1| TPA_inf: ribosomal protein L3B [Oryza sativa (japonica
cultivar-group)]
gi|146141408|tpg|DAA01150.1| TPA_inf: ribosomal protein L3B [Oryza sativa]
gi|215706975|dbj|BAG93435.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715327|dbj|BAG95078.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 389
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/303 (88%), Positives = 289/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FPKDD +KPC LT+F+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP++VVG+V YVKTPRGLRSLN+VWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y++D GKK IQ QLEK+KKYASVVRV+ HTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTIA+KVDY Y FFEK+IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQESH T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|212721340|ref|NP_001131208.1| uncharacterized protein LOC100192516 [Zea mays]
gi|194690876|gb|ACF79522.1| unknown [Zea mays]
gi|414866108|tpg|DAA44665.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
gi|414866109|tpg|DAA44666.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
Length = 389
Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust.
Identities = 266/303 (87%), Positives = 288/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FP+DD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDAKKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +YE D GKK IQ QLEK+KKYASV+RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVDY Y FFEK++PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|357157422|ref|XP_003577793.1| PREDICTED: 60S ribosomal protein L3-like [Brachypodium distachyon]
Length = 389
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/303 (87%), Positives = 288/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR +RHRGKVKAFP+DDP K C LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDPQKKCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPP+++VG+V YVKTPRGLR+LN+VWAQHLSE+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y++D GKK IQ QLEK+KKYASVVRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYASVVRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVDY Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|326497903|dbj|BAJ94814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/303 (87%), Positives = 288/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR +RHRGKVK+FPKDD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSE+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y++D GKK IQ QLEK+KKYA++VRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVDY Y FFEK++PV+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQESH T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|356544202|ref|XP_003540543.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
Length = 389
Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/303 (89%), Positives = 296/303 (97%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKD+PS+PCRLTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCRLTAFVGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP++VVGVVGYVKTPRGLR+LNT+WAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSK+YET+EGKK I++QLEK+KKYA+V+RVLAHTQIRK+KGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+ +KVDYAY FFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YK+ K QESH+ IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKADQESHSAIT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|33526886|gb|AAQ21397.1| ribosomal protein L3 [Triticum aestivum]
gi|33526907|gb|AAQ21398.1| ribosomal protein L3 [Triticum aestivum]
gi|34105766|gb|AAQ62074.1| ribosomal protein L3 [Triticum aestivum]
gi|118152391|gb|ABK63939.1| ribosomal protein L3-A2-I [Triticum aestivum]
gi|118152394|gb|ABK63941.1| ribosomal protein L3-A2 [Triticum aestivum]
gi|146141398|tpg|DAA01147.1| TPA_inf: ribosomal protein L3A-2 [Triticum aestivum]
Length = 389
Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust.
Identities = 261/303 (86%), Positives = 288/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR +RHRGKVK+FPKDD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSE+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y++D GKK IQ QLEK+KKYA++VRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDSGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTIA+KVDY Y FFEK++PV+AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK GQESH T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|118152392|gb|ABK63940.1| ribosomal protein L3-A2-II [Triticum aestivum]
Length = 401
Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust.
Identities = 261/303 (86%), Positives = 288/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR +RHRGKVK+FPKDD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSE+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y++D GKK IQ QLEK+KKYA++VRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDSGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTIA+KVDY Y FFEK++PV+AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK GQESH T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|357443613|ref|XP_003592084.1| L3 Ribosomal protein [Medicago truncatula]
gi|355481132|gb|AES62335.1| L3 Ribosomal protein [Medicago truncatula]
Length = 455
Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/307 (88%), Positives = 298/307 (97%)
Query: 17 QRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI 76
++++MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KP +LTAFLGYKAGMTHI
Sbjct: 63 RKKKMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHI 122
Query: 77 VRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRR 136
VR+VEKPGSKLHKKETCE VTIIETPPM+VVGVVGYVKTPRGLR+LNTVW QHLSEE++R
Sbjct: 123 VREVEKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKR 182
Query: 137 RFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQ 196
RFYKNWCKSKKKAF+KYSKQYE+DEGKK+IQ QLEK+KKYA+V+RVLAHTQIRKMKGLKQ
Sbjct: 183 RFYKNWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQ 242
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
KKAH+MEIQVNGGTIA+KVD+AY FFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRW
Sbjct: 243 KKAHIMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 302
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGK G+E+H
Sbjct: 303 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETH 362
Query: 317 TGITEFD 323
TEFD
Sbjct: 363 DAQTEFD 369
>gi|255570998|ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus communis]
gi|223534230|gb|EEF35945.1| 60S ribosomal protein L3, putative [Ricinus communis]
Length = 389
Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/303 (90%), Positives = 292/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+R RGKVKAFPKDDP KPCRLTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRQRGKVKAFPKDDPKKPCRLTAFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPPM+VVGVVGYVKTPRGLRSLNTVWAQHLSE+V+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLNTVWAQHLSEDVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSK++E++EGKK Q QLEK+KKY +V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKFESEEGKKDTQVQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG +A+KVD+AY FFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK G ESH+ IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGHESHSAIT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|315113296|pdb|3IZR|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|33526877|gb|AAQ21396.1| ribosomal protein L3 [Triticum aestivum]
gi|33526922|gb|AAQ21399.1| ribosomal protein L3 [Triticum aestivum]
gi|34105776|gb|AAQ62079.1| ribosomal protein L3 [Triticum aestivum]
gi|118152406|gb|ABK63947.1| ribosomal protein L3-A1 [Triticum aestivum]
gi|146141402|tpg|DAA01149.1| TPA_inf: ribosomal protein L3A-1 [Triticum aestivum]
Length = 389
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 262/303 (86%), Positives = 288/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR +RHRGKVK+FPKDD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSE+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y++D GKK IQ QLEK+KKYA++VRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVDY Y FFEK++PV+AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK GQESH T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|34105768|gb|AAQ62075.1| ribosomal protein L3 [Triticum aestivum]
gi|34105770|gb|AAQ62076.1| ribosomal protein L3 [Triticum aestivum]
gi|34105774|gb|AAQ62078.1| ribosomal protein L3 [Triticum aestivum]
gi|118152389|gb|ABK63938.1| ribosomal protein L3-B3 [Triticum aestivum]
gi|118152400|gb|ABK63944.1| ribosomal protein L3-B1 [Triticum aestivum]
gi|146141392|tpg|DAA01144.1| TPA_inf: ribosomal protein L3B-3 [Triticum aestivum]
gi|146141396|tpg|DAA01146.1| TPA_inf: ribosomal protein L3B-1 [Triticum aestivum]
Length = 389
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 262/303 (86%), Positives = 288/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR +RHRGKVKAFP+DD SK C LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPP+++VG+V YVKTPRGLR+LN+VWAQHLSE+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y++D GKK IQ QLEK+KKYA+VVRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTIA+KVDY Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|118152396|gb|ABK63942.1| ribosomal protein L3-A3 [Triticum aestivum]
gi|118152398|gb|ABK63943.1| ribosomal protein L3-A3 [Triticum aestivum]
gi|146141400|tpg|DAA01148.1| TPA_inf: ribosomal protein L3A-3 [Triticum aestivum]
Length = 389
Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust.
Identities = 261/303 (86%), Positives = 286/303 (94%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR +RHRGKVKAFPKDD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTP GLR+LN+VWAQHLSE+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPCGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y+ D GKK IQ QLEK+KKYA++VRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDCDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTIA+KVDY Y FFEK++PV+AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK GQESH T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|6688812|emb|CAB65281.1| L3 Ribosomal protein [Medicago sativa subsp. x varia]
Length = 388
Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/303 (89%), Positives = 294/303 (97%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KP +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIETPPM+VVGVVGYVKTPRGLR+LNTVW QHLSEE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAF+KYSKQYE+DEGKK+IQ QLEK+KKYA+V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTIA+KVD+AY FFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYNFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGK G+E+H T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|255641019|gb|ACU20789.1| unknown [Glycine max]
Length = 323
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/303 (89%), Positives = 295/303 (97%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKD+PS+PCRLT F+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCRLTTFVGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP++VVGVVGYVKTPRGLR+LNT+WAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSK+YET+EGKK I++QLEK+KKYA+V+RVLAHTQIRK+KGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+ +KVDYAY FFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NK++YK+ K QESH+ IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKRIYKVAKADQESHSAIT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|118152402|gb|ABK63945.1| ribosomal protein L3-B2 [Triticum aestivum]
gi|118152404|gb|ABK63946.1| ribosomal protein L3-B2 [Triticum aestivum]
gi|146141394|tpg|DAA01145.1| TPA_inf: ribosomal protein L3B-2 [Triticum aestivum]
Length = 389
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 260/303 (85%), Positives = 287/303 (94%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR +RHRGKVKAFP+DD SK C LTAFLGYK+GMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKSGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPP+++VG+V YVKTPRGLR+LN+VWAQHLSE+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y++D GKK I QLEK+KKYA+VVRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIHMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTIA+KVDY Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYSFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|224120106|ref|XP_002331138.1| predicted protein [Populus trichocarpa]
gi|222872866|gb|EEF09997.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/303 (88%), Positives = 291/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGK K+FPKDDP+KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKAKSFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPPM+VVGVVGYV TP GLRSL+TVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVNTPGGLRSLSTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY K+YE+++GKK IQAQLEK+KKY +V+RVL HTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLVHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG +A+KVD+AY FFEKQIP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGK GQESH +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKCGQESHCAVT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|118484565|gb|ABK94156.1| unknown [Populus trichocarpa]
Length = 389
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/303 (88%), Positives = 292/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGK K+FPKDDP+KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKAKSFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPPM+VVGVVGYV TP GLRSL+TVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVNTPGGLRSLSTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY K+YE+++GKK IQAQLEK+KKY +V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG +A+KVD+AY FFEKQIP+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE++KK+YKLGK GQESH +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELSKKIYKLGKCGQESHCAVT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|356531559|ref|XP_003534345.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
Length = 389
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/303 (88%), Positives = 293/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKD+PS+PC LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCGLTAFVGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP++VVGVVGYVKTPRGLR+LNTVWAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSK+YET+EGKK I++QLEK+KKYA+V+RVLAHTQIRK+KGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+ +KVDYAY FFEKQIPVDAVF KDEMIDI+GVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFHKDEMIDIVGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YK+ K ESH+ IT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKADHESHSAIT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|110740330|dbj|BAF02060.1| hypothetical protein [Arabidopsis thaliana]
Length = 555
Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/314 (85%), Positives = 298/314 (94%)
Query: 10 ESVAAAAQRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGY 69
E+V +RRRMSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GY
Sbjct: 156 EAVGTRRRRRRMSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGY 215
Query: 70 KAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQH 129
KAGMTHIVR+VEKPGSKLHKKETCEAVTIIETP M+VVGVV YVKTPRGLRSLNTVWAQH
Sbjct: 216 KAGMTHIVREVEKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQH 275
Query: 130 LSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIR 189
LSEEVRRRFYKNW KSKKKAFT Y+KQY++++GKK IQAQLEK+KKYA+V+RVLAHTQIR
Sbjct: 276 LSEEVRRRFYKNWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIR 335
Query: 190 KMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGY 249
KMKGLKQKKAH+MEIQ+NGGTIA+KVD+AY FFEKQIP++AVFQKDEMIDIIGVTKGKGY
Sbjct: 336 KMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGY 395
Query: 250 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y+LG
Sbjct: 396 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLG 455
Query: 310 KGGQESHTGITEFD 323
K G E+HT +TE+D
Sbjct: 456 KVGTEAHTAMTEYD 469
>gi|297837293|ref|XP_002886528.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata]
gi|297332369|gb|EFH62787.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata]
Length = 390
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/303 (89%), Positives = 292/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPPM+VVGVVGYVKTPRGLRSL+TVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLSTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYSK++ETDEGKK IQ+QLEK+KKY +V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTKYSKKHETDEGKKDIQSQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG IA+KVDYA FEKQ+PVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY++GK GQE+H+ +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|312283375|dbj|BAJ34553.1| unnamed protein product [Thellungiella halophila]
Length = 389
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/303 (87%), Positives = 291/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETP M+VVGVV YVKTPRGLRSLNTVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT Y+KQYE+++GKKSI AQLEK+KKY +V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYESEDGKKSIHAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTIA+KVD+AY FFEKQIP+D+VFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIDSVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y+LGK GQE+HT +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGQETHTAMT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|297846744|ref|XP_002891253.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp.
lyrata]
gi|297337095|gb|EFH67512.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/303 (88%), Positives = 291/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETP M+VVGVV YVKTPRGLRSLNTVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT Y+KQYET+EGKK IQAQLEK+KKYA+V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYETEEGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTIA+KVD+AY FFEKQIP++AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y+LGK G E+H+ +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHSAMT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|449435140|ref|XP_004135353.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
gi|449503293|ref|XP_004161930.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
Length = 388
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/303 (86%), Positives = 290/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD SKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDSSKPCRLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIE PPM+VVGVVGY++TPRGLRS TVWAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIRTPRGLRSFKTVWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWC SKKKAFTKYSK+YET++GKK IQ+QL+ ++K+++V+RVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLDSLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG + +KVDYAY FEKQ+PVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK GQ+SH+ +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|15220533|ref|NP_176352.1| 60S ribosomal protein L3-2 [Arabidopsis thaliana]
gi|21542436|sp|P22738.4|RL32_ARATH RecName: Full=60S ribosomal protein L3-2
gi|4585874|gb|AAD25547.1|AC005850_4 60s ribosomal protein L3 [Arabidopsis thaliana]
gi|28392966|gb|AAO41918.1| putative ribosomal protein [Arabidopsis thaliana]
gi|28973595|gb|AAO64122.1| putative ribosomal protein [Arabidopsis thaliana]
gi|332195738|gb|AEE33859.1| 60S ribosomal protein L3-2 [Arabidopsis thaliana]
Length = 390
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/303 (88%), Positives = 292/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPPM+VVGVVGYVKTPRGLRSL TVWAQHLSEE+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT+YSK++ET+EGKK IQ+QLEK+KKY SV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG IA+KVDYA FEKQ+PVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY++GK GQE+H+ +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|166858|gb|AAA66160.1| ribosomal protein [Arabidopsis thaliana]
Length = 389
Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/303 (87%), Positives = 291/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETP M+VVGVV YVKTPRGLRSLNTVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT Y+KQY++++GKK IQAQLEK+KKYA+V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKVKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTIA+KVD+AY FFEKQIP++AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y+LGK G E+HT +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|806279|gb|AAA66161.1| ribosomal protein [Arabidopsis thaliana]
Length = 390
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/303 (88%), Positives = 292/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPPM+VVGVVGYVKTPRGLRSL TVWAQHLSEE+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT+YSK++ET+EGKK IQ+QLEK+KKY SV+RVLAHTQIRKMKG+KQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGVKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG IA+KVDYA FEKQ+PVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY++GK GQE+H+ +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|15218306|ref|NP_175009.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|42571751|ref|NP_973966.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|79319275|ref|NP_001031146.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|334183068|ref|NP_001185148.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|334183070|ref|NP_001185149.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|334183072|ref|NP_001185150.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|334183074|ref|NP_001185151.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|334183076|ref|NP_001185152.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|27735225|sp|P17094.5|RL31_ARATH RecName: Full=60S ribosomal protein L3-1; AltName: Full=Protein
EMBRYO DEFECTIVE 2207
gi|11935191|gb|AAG42011.1|AF327421_1 putative ribosomal protein [Arabidopsis thaliana]
gi|13487800|gb|AAK27726.1|AF361101_1 putative ribosomal protein [Arabidopsis thaliana]
gi|13605657|gb|AAK32822.1|AF361809_1 At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|3617741|gb|AAC36018.1| L3 cytoplasmic ribosomal protein [Arabidopsis thaliana]
gi|14517418|gb|AAK62599.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|15450559|gb|AAK96457.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|15982761|gb|AAL09721.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|332193830|gb|AEE31951.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193831|gb|AEE31952.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193832|gb|AEE31953.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193834|gb|AEE31955.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193835|gb|AEE31956.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193836|gb|AEE31957.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193837|gb|AEE31958.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193838|gb|AEE31959.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
Length = 389
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/303 (87%), Positives = 291/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETP M+VVGVV YVKTPRGLRSLNTVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT Y+KQY++++GKK IQAQLEK+KKYA+V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTIA+KVD+AY FFEKQIP++AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y+LGK G E+HT +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|116791630|gb|ABK26048.1| unknown [Picea sitchensis]
gi|224285374|gb|ACN40410.1| unknown [Picea sitchensis]
Length = 389
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 262/303 (86%), Positives = 292/303 (96%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DD SKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDQSKPCKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVT+IETPPM++VGVV Y+KTPRGLR+LNTVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTLIETPPMVIVGVVAYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW ++KKKAFTKY+K+Y+++EGKK IQ +LEK+KKYA+V+RVLAHTQI+KMKGLKQKKAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKDIQTELEKMKKYATVIRVLAHTQIKKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+A+KVDYAY FFEKQ+P+DA+FQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVAQKVDYAYNFFEKQVPIDALFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK QESH +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKADQESHKAMT 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|242077200|ref|XP_002448536.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor]
gi|241939719|gb|EES12864.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor]
Length = 389
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/303 (87%), Positives = 290/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FP+DDP KPC LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFVGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y++D GKK IQ QLEK+KKYASV+RV+AHTQI+KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYASVIRVIAHTQIKKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVDY Y FFEK++PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQESH T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQESHDAST 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|23397228|gb|AAN31896.1| putative ribosomal protein [Arabidopsis thaliana]
Length = 389
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/303 (87%), Positives = 290/303 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETP M+VVGVV YVKTPRGLRSLNTVWAQH SEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHFSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT Y+KQY++++GKK IQAQLEK+KKYA+V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTIA+KVD+AY FFEKQIP++AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y+LGK G E+HT +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>gi|34105772|gb|AAQ62077.1| ribosomal protein L3 [Triticum aestivum]
Length = 384
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/303 (84%), Positives = 283/303 (93%), Gaps = 5/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR +RHRGKVKAFP+DD SK C LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E LHKKETCEAVTI+ETPP+++VG+V YVKTPRGLR+LN+VWAQHLSE+VRRRFYK
Sbjct: 61 E-----LHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 115
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +Y++D GKK IQ QLEK+KKYA+VVRV+AHTQIRKMKGLKQKKAH
Sbjct: 116 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 175
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTIA+KVDY Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 176 LMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 235
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H T
Sbjct: 236 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 295
Query: 321 EFD 323
EFD
Sbjct: 296 EFD 298
>gi|37909690|gb|AAP23996.1| ribosomal protein L3B [Oryza sativa Indica Group]
Length = 345
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/292 (87%), Positives = 278/292 (95%)
Query: 32 GSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 91
GSLGFLPRKR++RHRGKVK+FPKDD +KPC LT+F+GYKAGMTHIVR+VEKPGSKLHKKE
Sbjct: 1 GSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREVEKPGSKLHKKE 60
Query: 92 TCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFT 151
TCEAVTIIETPP++VVG+V YVKTPRGLRSLN+VWAQHLSEEVRRRFYKNWCKSKKKAFT
Sbjct: 61 TCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCKSKKKAFT 120
Query: 152 KYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTI 211
KY+ +Y++D GKK IQ QLEK+KKYASVVRV+ HTQIRKMKGLKQKKAHLMEIQ+NGGTI
Sbjct: 121 KYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAHLMEIQINGGTI 180
Query: 212 AEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 271
A+KVDY Y FFEK+IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK
Sbjct: 181 ADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 240
Query: 272 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
VACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQESH TEFD
Sbjct: 241 VACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFD 292
>gi|302788822|ref|XP_002976180.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii]
gi|300156456|gb|EFJ23085.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii]
Length = 389
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 251/303 (82%), Positives = 285/303 (94%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDP+K LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAQRHRGKVKSFPRDDPTKKPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VGVV Y+KTPRGLRSLNTVWAQHLS++++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLIIVGVVAYIKTPRGLRSLNTVWAQHLSDDLKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N+ KSKKKAFTKY+K+Y+TDEGKK I+ +LE++KKY SV+RVLAHT++R +KG+KQKKAH
Sbjct: 121 NFYKSKKKAFTKYAKKYDTDEGKKGIEHELERMKKYGSVIRVLAHTKVRNLKGIKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT AEKVD+AY FFEK +P+D+VF+KDEMID+IGVTKG GYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTTAEKVDFAYNFFEKAVPIDSVFRKDEMIDVIGVTKGHGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK GQESH T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKQGQESHKAST 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|302769558|ref|XP_002968198.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii]
gi|300163842|gb|EFJ30452.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii]
Length = 389
Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/303 (82%), Positives = 285/303 (94%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDP+K LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAQRHRGKVKSFPRDDPTKKPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VGVV Y+KTPRGLRSLNTVWAQHLS++++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLIIVGVVAYIKTPRGLRSLNTVWAQHLSDDLKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N+ KSKKKAFTKY+K+Y+TDEGKK I+ +LE++KKY SV+RVLAHT++R +KG+KQKKAH
Sbjct: 121 NFYKSKKKAFTKYAKKYDTDEGKKGIEHELERMKKYGSVIRVLAHTKVRNLKGIKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT AEKVD+AY FFEK +P+D+VF+KDEMID+IGVTKG GYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTTAEKVDFAYNFFEKAVPIDSVFRKDEMIDVIGVTKGHGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK GQ+SH T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKQGQDSHKAST 300
Query: 321 EFD 323
EFD
Sbjct: 301 EFD 303
>gi|168060915|ref|XP_001782438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666109|gb|EDQ52773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/304 (82%), Positives = 282/304 (92%), Gaps = 1/304 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+R RGKVK FPKDDP K LT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRSRGKVKTFPKDDPVKKPHLTSFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPP++VVG+V Y+KTPRGLRSLNTVWAQHLS+EV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPIIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAF+KYSK+YE++EGK+ +Q++LE++KKYASV+RVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKRDLQSELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGGTIAEKVD+ Y FEK +PVDAVF KDEMIDIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 LAEIQVNGGTIAEKVDFGYNLFEKPVPVDAVFNKDEMIDIIGVTRGHGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG-QESHTGI 319
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK +ES +
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKSADKESFSAS 300
Query: 320 TEFD 323
TEFD
Sbjct: 301 TEFD 304
>gi|168040500|ref|XP_001772732.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168040502|ref|XP_001772733.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675957|gb|EDQ62446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675958|gb|EDQ62447.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/304 (81%), Positives = 282/304 (92%), Gaps = 1/304 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAAR RGKVK FPKD SK LT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDVASKEPHLTSFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPPM+VVG+V Y+KTPRGLRSLNTVWAQHLS+EV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAF+KYSK+YE++EGKK ++++LE++KKYASV+RVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG+IA KVD+ Y FEK++PVD+VF+KDEMIDIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 LAEIQVNGGSIAAKVDFGYKLFEKEVPVDSVFRKDEMIDIIGVTRGHGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK-GGQESHTGI 319
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK ++S +
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKVADKQSFSAS 300
Query: 320 TEFD 323
TEFD
Sbjct: 301 TEFD 304
>gi|168026163|ref|XP_001765602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683240|gb|EDQ69652.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/304 (81%), Positives = 279/304 (91%), Gaps = 1/304 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAAR RGKVK FPKDD SK LT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDDASKAPHLTSFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTI+ETPPM+VVG+V Y+KTPRGLRSLNTVWAQHLS+EV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAF+ YSK+YE++EGKK ++++LE++KKYASV+RVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWSKSKKKAFSNYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG IAEKVD+ + FEK + VDAVF+KDEMIDIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 LAEIQVNGGNIAEKVDFGFKLFEKWVSVDAVFRKDEMIDIIGVTRGHGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHTGI 319
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK ++S
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKAEDKQSFGAS 300
Query: 320 TEFD 323
TEFD
Sbjct: 301 TEFD 304
>gi|357155087|ref|XP_003577004.1| PREDICTED: cytochrome P450 89A2-like [Brachypodium distachyon]
Length = 836
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 244/283 (86%), Positives = 267/283 (94%)
Query: 41 RAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIE 100
R +RHRGKVKAFP+DD K C LTAFLGYKAGMTHIVR+VEKPGSKLHKKETCEAVTIIE
Sbjct: 468 RCSRHRGKVKAFPRDDQQKSCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIE 527
Query: 101 TPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETD 160
TPP+++VG+V YVKTPRGLR+LN+VWAQHLSE+VRRRFYKNWCKSKKKAFTKY+ +Y+TD
Sbjct: 528 TPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDTD 587
Query: 161 EGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYG 220
GKK IQ QLEK+KKYASVVRV+AHTQIRKMKGLKQKKAHLMEIQ+NGGTIA+KVDY Y
Sbjct: 588 AGKKEIQLQLEKMKKYASVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYK 647
Query: 221 FFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 280
FFEK++PV+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP
Sbjct: 648 FFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 707
Query: 281 ARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
ARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H TEFD
Sbjct: 708 ARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFD 750
>gi|414587224|tpg|DAA37795.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
Length = 429
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/285 (84%), Positives = 265/285 (92%)
Query: 39 RKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTI 98
R ++ RG ++FP+DDP KPC LTAFLGYKAGMTHIVR+VEKPGSKLHKKETCEAVTI
Sbjct: 59 RTVSSSTRGTAQSFPRDDPKKPCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTI 118
Query: 99 IETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYE 158
IETPP+++VG+V YVKTPRGLR+LN+VWAQHLSEEVRRRFYKNWCKSKKKAFTKY+ +YE
Sbjct: 119 IETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYE 178
Query: 159 TDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYA 218
D GKK IQ QLEK+KKYASV+RV+AHTQIRKMKGLKQKKAHLMEIQVNGGTIA+KVDY
Sbjct: 179 NDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYG 238
Query: 219 YGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 278
Y FFEK++PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW
Sbjct: 239 YKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 298
Query: 279 HPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
HPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H TEFD
Sbjct: 299 HPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDASTEFD 343
>gi|297795267|ref|XP_002865518.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp.
lyrata]
gi|297311353|gb|EFH41777.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp.
lyrata]
Length = 375
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/303 (82%), Positives = 275/303 (90%), Gaps = 14/303 (4%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETP M+VVGVV YVKT RGLRSLNTVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTLRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT Y+KQYE+D+G+K IQAQLEK+KKY +++RVLAHTQIRKMKGL QKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYESDDGRKGIQAQLEKMKKYGTIIRVLAHTQIRKMKGLTQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTI IP+DAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTI--------------IPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 226
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLR+VACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y+LGK G E+H+ +T
Sbjct: 227 LPRKTHRGLREVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTETHSAMT 286
Query: 321 EFD 323
E+D
Sbjct: 287 EYD 289
>gi|358346097|ref|XP_003637108.1| hypothetical protein MTR_072s1001, partial [Medicago truncatula]
gi|355503043|gb|AES84246.1| hypothetical protein MTR_072s1001, partial [Medicago truncatula]
Length = 349
Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/274 (89%), Positives = 266/274 (97%)
Query: 50 KAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGV 109
KAFPKDDP+KPCRLTAF+GYK+GMTHIVR+VEKPGSKLHKKETCEAVTIIETPP++VVGV
Sbjct: 1 KAFPKDDPTKPCRLTAFVGYKSGMTHIVREVEKPGSKLHKKETCEAVTIIETPPIVVVGV 60
Query: 110 VGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQ 169
VGYVKTPRGLR+LNTVWAQHLSE+V+RRFYKNW KSKKKAFTKY+K+YETDEGKK IQ Q
Sbjct: 61 VGYVKTPRGLRTLNTVWAQHLSEDVKRRFYKNWAKSKKKAFTKYTKKYETDEGKKDIQTQ 120
Query: 170 LEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVD 229
LEK+KKYA+V+RVLAHTQ+RK+KGLKQKKAHLMEIQVNGGT+ +KVDYAY FFEKQIPVD
Sbjct: 121 LEKLKKYATVIRVLAHTQVRKLKGLKQKKAHLMEIQVNGGTVNQKVDYAYNFFEKQIPVD 180
Query: 230 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 289
AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR
Sbjct: 181 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 240
Query: 290 AGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
AGQNGYHHRTE+NKK+YK+GK QESHT ITEFD
Sbjct: 241 AGQNGYHHRTELNKKIYKVGKQDQESHTAITEFD 274
>gi|148807241|gb|ABR13330.1| putative 60S ribosomal protein L3 [Prunus dulcis]
Length = 284
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/277 (89%), Positives = 265/277 (95%)
Query: 17 QRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI 76
+RR+MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPC+LTAFLGYKAGMTHI
Sbjct: 3 KRRKMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHI 62
Query: 77 VRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRR 136
V DVEKPGSKLHKKETCEAVTIIE PPM+VVGVVGYVKTPRGLRSLNTVWAQHLSEEV+R
Sbjct: 63 VGDVEKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYVKTPRGLRSLNTVWAQHLSEEVKR 122
Query: 137 RFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQ 196
RFYKNWCKSKKKAF KYSK YE++EGKKSI++Q EK+ KYA+V+RVLAHTQIRKMKGLKQ
Sbjct: 123 RFYKNWCKSKKKAFAKYSKNYESEEGKKSIESQFEKLIKYATVIRVLAHTQIRKMKGLKQ 182
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
KKAHLMEIQVNGGTIA+KV++A FFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRW
Sbjct: 183 KKAHLMEIQVNGGTIAQKVEFAKSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 242
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 293
GVTRLPRKTHRGLRKVACIGAWHPAR S TVARAG
Sbjct: 243 GVTRLPRKTHRGLRKVACIGAWHPARFSXTVARAGHE 279
>gi|388502726|gb|AFK39429.1| unknown [Lotus japonicus]
Length = 350
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/303 (78%), Positives = 257/303 (84%), Gaps = 39/303 (12%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDPSK +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIETPPM++VGVVGYVKTPRG+R+LNTVWAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAF+KYSKQ+E++EGKK++QAQLEKIKKYA+VVRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
IIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 ---------------------------------------IIGVTKGKGYEGVVTRWGVTR 201
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+Y+LG G ESH+ IT
Sbjct: 202 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYRLGMAGDESHSAIT 261
Query: 321 EFD 323
EFD
Sbjct: 262 EFD 264
>gi|159489312|ref|XP_001702641.1| ribosomal protein L3, component of cytosolic 80S ribosome and 60S
large subunit [Chlamydomonas reinhardtii]
gi|158280663|gb|EDP06420.1| ribosomal protein L3 [Chlamydomonas reinhardtii]
Length = 386
Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/303 (76%), Positives = 263/303 (86%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPR GSLGF PRKR R +GKVK+FP+DD SKP LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRSGSLGFSPRKRCRRGKGKVKSFPRDDASKPVHLTAFMGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIE PPM+VVG VGYVKTPRGLRSLNTVWA+HLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIECPPMVVVGAVGYVKTPRGLRSLNTVWAEHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+Y +GKK+I+A+L +KK+ V+RVLAHTQ++K+ G KKAH
Sbjct: 121 NWYKSKKKAFTKYAKKY--SDGKKAIEAELAALKKHCCVIRVLAHTQVKKL-GFGVKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+QVNGGT+A+KVD+AY FEKQ+ VDAVFQ +EMID I +TKG G +GVV RWGVTR
Sbjct: 178 LMEVQVNGGTVAQKVDFAYSMFEKQVSVDAVFQPNEMIDTIAITKGHGVQGVVQRWGVTR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ G+HHRTE+NKKVYK+GK G SH T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFHHRTEINKKVYKIGKKGDASHLATT 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|284073154|gb|ADB77816.1| 60S ribosomal protein L3 [Chlamydomonas reinhardtii]
gi|284073156|gb|ADB77817.1| 60S ribosomal protein L3 [Cladophora coelothrix]
Length = 384
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/303 (76%), Positives = 263/303 (86%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPR GSLGF PRKR R +GKVK+FP+DD SKP LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRSGSLGFSPRKRCRRGKGKVKSFPRDDASKPVHLTAFMGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIE PPM+VVG VGYVKTPRGLRSLNTVWA+HLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIECPPMVVVGAVGYVKTPRGLRSLNTVWAEHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+Y +GKK+I+A+L +KK+ V+RVLAHTQ++K+ G KKAH
Sbjct: 121 NWYKSKKKAFTKYAKKY--SDGKKAIEAELAALKKHCCVIRVLAHTQVKKL-GFGVKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+QVNGGT+A+KVD+AY FEKQ+ VDAVFQ +EMID I +TKG G +GVV RWGVTR
Sbjct: 178 LMEVQVNGGTVAQKVDFAYSMFEKQVSVDAVFQPNEMIDTIAITKGHGVQGVVQRWGVTR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ G+HHRTE+NKKVYK+GK G SH T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFHHRTEINKKVYKIGKKGDASHLATT 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|414587230|tpg|DAA37801.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
gi|414866107|tpg|DAA44664.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
Length = 352
Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/303 (77%), Positives = 254/303 (83%), Gaps = 37/303 (12%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR++RHRGK
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGK-------------------------------- 28
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+LHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSEEVRRRFYK
Sbjct: 29 -----ELHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 83
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKY+ +YE D GKK IQ QLEK+KKYASV+RV+AHTQIRKMKGLKQKKAH
Sbjct: 84 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 143
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KVDY Y FFEK++PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 144 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 203
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H T
Sbjct: 204 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 263
Query: 321 EFD 323
EFD
Sbjct: 264 EFD 266
>gi|303273052|ref|XP_003055887.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461971|gb|EEH59263.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 387
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/303 (74%), Positives = 262/303 (86%), Gaps = 2/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPR G LGFLP+KR+ R RGK K FP+DDP+ P LTAFLG+KAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRLGHLGFLPKKRSQRARGKCKKFPRDDPTSPPHLTAFLGFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKET EAVTI+ETP M+VVGVVGYVKTP+GLR+LNTVWA+HLS E++RRFYK
Sbjct: 61 DKPGSKLHKKETLEAVTIVETPAMIVVGVVGYVKTPQGLRALNTVWAEHLSVEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSK+KAFTKY K+Y G +I +L+ +KK A VVRV+AHTQ+RK+K LKQKKAH
Sbjct: 121 NWYKSKRKAFTKYEKKYANGSG--AIDQELDALKKNADVVRVIAHTQVRKVKNLKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGG++A+KVD+AY FFEK +PVDAVF KDEMID I VTKGKG+EGVVTRWGVTR
Sbjct: 179 MMEIQVNGGSVADKVDFAYKFFEKAVPVDAVFAKDEMIDCISVTKGKGFEGVVTRWGVTR 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKV CIGAWHPARV +TVAR GQ+GYHHRTE+NKK+Y++GK G SH T
Sbjct: 239 LPRKTHRGLRKVGCIGAWHPARVGYTVARPGQHGYHHRTEINKKIYRVGKEGDSSHKAST 298
Query: 321 EFD 323
+ D
Sbjct: 299 DHD 301
>gi|145340549|ref|XP_001415385.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S
large subunit [Ostreococcus lucimarinus CCE9901]
gi|144575608|gb|ABO93677.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S
large subunit [Ostreococcus lucimarinus CCE9901]
Length = 386
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/303 (73%), Positives = 262/303 (86%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPR+G+LGFLP+KR+ R RGKVK+FPKDD SKP LTAF+G+KAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRYGNLGFLPKKRSKRSRGKVKSFPKDDASKPPHLTAFMGFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK+HKKETCE+VTIIE P ++VVG+VGYV+TP+GLR TVWA+HL++EVRRRFYK
Sbjct: 61 DKPGSKMHKKETCESVTIIECPELIVVGLVGYVRTPKGLRGKKTVWAEHLNDEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K Y SI L+++KK V+RV+AHTQ+RK+ GLKQKKAH
Sbjct: 121 NWFKSKKKAFTKYTKNYTNG----SIDKDLDELKKSCDVIRVIAHTQVRKVSGLKQKKAH 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGG +A KVD+ Y FEK +PVD VFQ+DEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 177 IMEIQVNGGDVAAKVDFGYALFEKAVPVDTVFQQDEMIDLIGVTKGKGYEGVVTRWGVTR 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKV CIGAWHP+RVS+TVARAGQ+GYHHRTE+NKKVYK+GK GQ+S T
Sbjct: 237 LPRKTHRGLRKVGCIGAWHPSRVSYTVARAGQHGYHHRTEINKKVYKIGKAGQDSFGAST 296
Query: 321 EFD 323
D
Sbjct: 297 FHD 299
>gi|255636886|gb|ACU18776.1| unknown [Glycine max]
Length = 257
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/257 (90%), Positives = 252/257 (98%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKD+PS+PC LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCGLTAFVGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP++VVGVVGYVKTPRGLR+LNTVWAQHLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWCKSKKKAFTKYSK+YET+EGKK I++QLEK+KKYA+V+RVLAHTQIRK+KGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+ +KVDYAY FFEKQIPVDAVF KDEMIDI+GVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFHKDEMIDIVGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGA 277
LPRKTHRGLRKVACIGA
Sbjct: 241 LPRKTHRGLRKVACIGA 257
>gi|414587234|tpg|DAA37805.1| TPA: hypothetical protein ZEAMMB73_880497 [Zea mays]
gi|414588490|tpg|DAA39061.1| TPA: hypothetical protein ZEAMMB73_842297 [Zea mays]
gi|414866106|tpg|DAA44663.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
Length = 337
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/251 (88%), Positives = 239/251 (95%)
Query: 73 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSE 132
MTHIVR+VEKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSE
Sbjct: 1 MTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSE 60
Query: 133 EVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMK 192
EVRRRFYKNWCKSKKKAFTKY+ +YE D GKK IQ QLEK+KKYASV+RV+AHTQIRKMK
Sbjct: 61 EVRRRFYKNWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMK 120
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
GLKQKKAHLMEIQVNGGTIA+KVDY Y FFEK++PVDAVFQKDEMIDIIGVTKGKGYEGV
Sbjct: 121 GLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGV 180
Query: 253 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG 312
VTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK G
Sbjct: 181 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAG 240
Query: 313 QESHTGITEFD 323
QE+H TEFD
Sbjct: 241 QETHDASTEFD 251
>gi|328852642|gb|EGG01786.1| hypothetical protein MELLADRAFT_45021 [Melampsora larici-populina
98AG31]
Length = 388
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/304 (73%), Positives = 267/304 (87%), Gaps = 5/304 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+EHPRHGS GFLPRKRAARHRGKVK+FP+DD +KP LTA LGYKAGMTHIVR++
Sbjct: 1 MSHRKWEHPRHGSTGFLPRKRAARHRGKVKSFPRDDKTKPVHLTAMLGYKAGMTHIVREL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSK+HK+E EAVTIIETPPM++VGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 ERPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQY-ETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
NW +SKKKAFTKY+K++ E+ G SI +LE+I+KY +VVRVLAHTQIRK GLKQKKA
Sbjct: 121 NWYRSKKKAFTKYAKKHAESSTG--SIARELERIRKYCTVVRVLAHTQIRKT-GLKQKKA 177
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
HLMEIQVNGG++A+KVD+A FEK V ++F++DE ID+I VTKGKG+EGV RWG
Sbjct: 178 HLMEIQVNGGSVADKVDFAKSHFEKTFDVSSIFEQDENIDVIAVTKGKGFEGVTHRWGTK 237
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
+LPRKTH+GLRKVACIGAWHP++V FTVARAGQNGYHHRTE+NKKV+++GKGG E++
Sbjct: 238 KLPRKTHKGLRKVACIGAWHPSKVMFTVARAGQNGYHHRTELNKKVFRVGKGGDEAN-AT 296
Query: 320 TEFD 323
TEFD
Sbjct: 297 TEFD 300
>gi|390601087|gb|EIN10481.1| 60S ribosomal protein L3 [Punctularia strigosozonata HHB-11173 SS5]
Length = 388
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/303 (71%), Positives = 265/303 (87%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAVMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVTI+ETPPM+VVGVVGYV+TPRGLR+L TVWA HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTIVETPPMIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K+ D G KS+Q +LE+I+KY +VVRVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKAAEDNG-KSVQRELERIRKYCTVVRVLAHTQIRKT-GLAQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KVD+A+G FEK I V++VF++DE++D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVDFAHGLFEKPIEVNSVFEQDEVVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G G E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRVGSGSDEGNAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 ESD 300
>gi|331233068|ref|XP_003329195.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309308185|gb|EFP84776.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 388
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/304 (72%), Positives = 266/304 (87%), Gaps = 5/304 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+EHPRHGS GFLPRKRAARHRGKVK+FP DD +KP LTA LGYKAGMTHI+RD+
Sbjct: 1 MSHRKWEHPRHGSTGFLPRKRAARHRGKVKSFPVDDKTKPVHLTAMLGYKAGMTHILRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVTI+ETPPM++VGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTIVETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQY-ETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
NW +SKKKAFTKY+K++ E+ G SI +LE+I+KY +VVRVLAHTQIRK GLKQKKA
Sbjct: 121 NWYRSKKKAFTKYAKKHAESSTG--SIARELERIRKYCTVVRVLAHTQIRKT-GLKQKKA 177
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
HLMEIQVNGG++A+KVD+A FEK V +VF+++E ID+I VTKGKGYEGV RWG
Sbjct: 178 HLMEIQVNGGSVADKVDFAKSHFEKTFDVSSVFEQNENIDVIAVTKGKGYEGVTHRWGCK 237
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
+LPRKTH+GLRKVACIGAWHP++V FTVARAGQ+GYHHRTE+NKKV+++GKGG E++
Sbjct: 238 KLPRKTHKGLRKVACIGAWHPSKVMFTVARAGQDGYHHRTELNKKVFRVGKGGDEAN-AT 296
Query: 320 TEFD 323
TEFD
Sbjct: 297 TEFD 300
>gi|395328899|gb|EJF61289.1| 60S ribosomal protein L3 [Dichomitus squalens LYAD-421 SS1]
Length = 388
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 264/303 (87%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVKAFPKDDP KP LTA LGYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAILGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSK+HK+E EAVTI+ETPP++VVGVVGYV+TPRGLR+L TVWA HLS+E++RRFYK
Sbjct: 61 ERPGSKMHKREVVEAVTIVETPPLIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ D G KSI +LE+I+KY +VVRVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHAED-GGKSIARELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++ +KV++A+G FEK + V +VF++DE++D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSVVDKVEFAHGLFEKPVEVSSVFEQDEVVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G+ G++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGR-GEDDGNAST 297
Query: 321 EFD 323
E D
Sbjct: 298 EHD 300
>gi|323455903|gb|EGB11771.1| hypothetical protein AURANDRAFT_36266 [Aureococcus anophagefferens]
Length = 393
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/305 (71%), Positives = 263/305 (86%), Gaps = 4/305 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHG+LGFLP+KR H G+V++FPKDD SKPC LTAF+ YKAGMTH+VRDV
Sbjct: 1 MSHRKFEAPRHGNLGFLPKKRTRHHHGRVRSFPKDDASKPCHLTAFMAYKAGMTHVVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HKKE EAVT++E PPM+VVG+VGYV+TPRGLRSL TVWA LSEEV+RRFYK
Sbjct: 61 DRPGSKVHKKEIVEAVTVLEAPPMVVVGLVGYVETPRGLRSLATVWAAFLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYE-TDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
NW KSK+KA TKY+ +Y +D G+K + +LE+IKKY SVVRV+AHTQ++K+K L+QKKA
Sbjct: 121 NWYKSKRKAMTKYAAKYSASDGGEKDVDRELERIKKYCSVVRVIAHTQVKKLK-LRQKKA 179
Query: 200 HLMEIQVNGGT-IAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
H+MEIQVNGG +A KVDYA G FE+++PVD VF +EMID++G T+G G EGVVTRWGV
Sbjct: 180 HVMEIQVNGGADVAAKVDYAKGLFEQEVPVDTVFNANEMIDVLGATRGHGTEGVVTRWGV 239
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
TRLPRKTHRGLRKVACIGAWHP+RVSFTVAR+GQNGYHHRTEMNKK+Y++GK G ++ +
Sbjct: 240 TRLPRKTHRGLRKVACIGAWHPSRVSFTVARSGQNGYHHRTEMNKKIYRIGKSG-DAKSA 298
Query: 319 ITEFD 323
TE D
Sbjct: 299 STEAD 303
>gi|384248786|gb|EIE22269.1| ribosomal protein L3 component of cytosolic 80S ribosome and 60S
large subunit [Coccomyxa subellipsoidea C-169]
Length = 390
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/303 (74%), Positives = 267/303 (88%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLP+KR R +GK+K+FP+DDPSKPC LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPKKRCRRGKGKIKSFPRDDPSKPCHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKET EAVTIIETPPM+VVGVVGYV T GLRSLNTVWA+HLS EV+R+FYK
Sbjct: 61 EKPGSKLHKKETAEAVTIIETPPMIVVGVVGYVITATGLRSLNTVWAEHLSNEVKRKFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW K+KKKAF +Y+K+Y +GKK+I+ +L ++KK SV+RVLAHTQI K+ G QKKAH
Sbjct: 121 NWFKAKKKAFHRYAKKY--TDGKKTIEEELNQLKKNCSVIRVLAHTQITKI-GYGQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ EIQ+NGG+I +KVD+AY FEK + VD++FQ +EMID I +TKG+G EGVVTRWGVTR
Sbjct: 178 MSEIQINGGSIEDKVDFAYQLFEKPVTVDSIFQANEMIDTIAITKGRGTEGVVTRWGVTR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQ+G+HHRTEMNKKVYK+GK G+ESH T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPARVSWTVARAGQHGFHHRTEMNKKVYKIGKKGEESHKATT 297
Query: 321 EFD 323
E+D
Sbjct: 298 EYD 300
>gi|225563388|gb|EEH11667.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus G186AR]
Length = 552
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/322 (68%), Positives = 266/322 (82%), Gaps = 9/322 (2%)
Query: 2 SLPALEHNESVAAAAQRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPC 61
SLP + N + R +MSHRKFE PRHGSL FLPRKR+ARHRGKVK+FPKDDP KP
Sbjct: 148 SLPPRQTNHN------RVKMSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPV 201
Query: 62 RLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRS 121
LTA +GYKAGMT VRD+E+PG+K+HKKE EAVTI+ETPPM+ VGVVGY++TPRGLRS
Sbjct: 202 HLTAAMGYKAGMTTTVRDLERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRS 261
Query: 122 LNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVR 181
L TVWA+HLS+EV+RRFYKNW KSKKKAFTKY+K + ++G S+ +LE+IKKY +VVR
Sbjct: 262 LTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYAKNHSENKG-ASVARELERIKKYCTVVR 320
Query: 182 VLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 241
+LAHTQIRK LKQKKAHLME+QVNGG++A+KVD+A+G FEK I +D +F+KDEMID+I
Sbjct: 321 LLAHTQIRKTP-LKQKKAHLMEVQVNGGSVADKVDFAHGLFEKPIEIDTIFEKDEMIDVI 379
Query: 242 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 301
VTKG G+ GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT
Sbjct: 380 AVTKGHGFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSC 439
Query: 302 NKKVYKLGKGGQESHTGITEFD 323
N K+Y++GKG E + TEFD
Sbjct: 440 NHKIYRIGKGSDEGNAS-TEFD 460
>gi|343424921|emb|CBQ68459.1| probable RPL3-60s ribosomal protein l3 [Sporisorium reilianum SRZ2]
Length = 391
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/303 (71%), Positives = 260/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP KP LTA +GYKAGMTHIVRD+
Sbjct: 1 MSHCKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAMIGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HKKE EAVT+IETPPM+ VGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKMHKKEIVEAVTVIETPPMVAVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ G SI +LE+IKKY +VVRVLAHTQ+RK GLKQKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSESNG-ASISRELERIKKYCTVVRVLAHTQVRKT-GLKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGG++AEKVD+A FEK V +VF+++E+ID+I VTKG GYEGV RWG +
Sbjct: 179 LMEVQINGGSVAEKVDFAKEHFEKTFDVKSVFEQNEIIDVIAVTKGHGYEGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRK+ACIGAWHPA V FTVAR+GQ+GYHHRTE+ KK+Y++ G ++ +G T
Sbjct: 239 LPRKTHRGLRKIACIGAWHPANVMFTVARSGQDGYHHRTEIGKKIYRIANGDDKT-SGST 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|240275987|gb|EER39500.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H143]
gi|325093348|gb|EGC46658.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H88]
Length = 439
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/322 (68%), Positives = 266/322 (82%), Gaps = 9/322 (2%)
Query: 2 SLPALEHNESVAAAAQRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPC 61
SLP + N + R +MSHRKFE PRHGSL FLPRKR+ARHRGKVK+FPKDDP KP
Sbjct: 35 SLPPRQTNHN------RVKMSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPV 88
Query: 62 RLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRS 121
LTA +GYKAGMT VRD+E+PG+K+HKKE EAVTI+ETPPM+ VGVVGY++TPRGLRS
Sbjct: 89 HLTAAMGYKAGMTTTVRDLERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRS 148
Query: 122 LNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVR 181
L TVWA+HLS+EV+RRFYKNW KSKKKAFTKY+K + ++G S+ +LE+IKKY +VVR
Sbjct: 149 LTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYAKNHSENKG-ASVARELERIKKYCTVVR 207
Query: 182 VLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 241
+LAHTQIRK LKQKKAHLME+QVNGG++A+KVD+A+G FEK I +D +F+KDEMID+I
Sbjct: 208 LLAHTQIRKTP-LKQKKAHLMEVQVNGGSVADKVDFAHGLFEKPIEIDTIFEKDEMIDVI 266
Query: 242 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 301
VTKG G+ GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT
Sbjct: 267 AVTKGHGFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSC 326
Query: 302 NKKVYKLGKGGQESHTGITEFD 323
N K+Y++GKG E + TEFD
Sbjct: 327 NHKIYRIGKGSDEGNAS-TEFD 347
>gi|169861488|ref|XP_001837378.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
gi|116501399|gb|EAU84294.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
Length = 388
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 259/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVKAFPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVTIIETPPM+ VG+VGYV+TPRGLR+L TVWA HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTIIETPPMIAVGLVGYVETPRGLRTLTTVWANHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K+ ++G KS+Q +LE+I+KY SVVRVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKK-NAEDGGKSVQRELERIRKYCSVVRVLAHTQIRKT-GLAQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG++A+KVD+ Y FEK I V +VF++DE +D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQINGGSVADKVDFGYKLFEKPIEVSSVFEQDENVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V F+VARAGQNGYHHRTE+NKK+Y++G G + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSNVMFSVARAGQNGYHHRTEINKKIYRIGLGSDDGNAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 ESD 300
>gi|388855824|emb|CCF50608.1| probable RPL3-60s ribosomal protein l3 [Ustilago hordei]
Length = 391
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 261/303 (86%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP KP LTA +GYKAGMTHIVRD+
Sbjct: 1 MSHCKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAMIGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HKKE EAVT++ETPPM+ VGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKMHKKEIVEAVTVVETPPMVAVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFTKY+K++ + G SI +LE+IKKY +VVR+LAHTQ+RK GLKQKKAH
Sbjct: 121 NWYRSKKKAFTKYAKKHSENNG-ASISRELERIKKYCTVVRLLAHTQVRKT-GLKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGG++A+KVD+A FEK V +VF+++E++D+I VTKG GYEGV RWG +
Sbjct: 179 LMEVQINGGSVADKVDFAKEHFEKTFDVKSVFEQNEIVDVIAVTKGHGYEGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRK+ACIGAWHPA V FTVAR+GQ+GYHHRTE+ KK+Y++ G ++ +G T
Sbjct: 239 LPRKTHRGLRKIACIGAWHPANVMFTVARSGQDGYHHRTEIGKKIYRIANGDDKT-SGST 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|327349122|gb|EGE77979.1| hypothetical protein BDDG_00916 [Ajellomyces dermatitidis ATCC
18188]
Length = 392
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKR+ARHRGKVK+FPKDDP KP LTA +GYKAGMT VRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTTVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAVTI+ETPPM+ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K + + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKNHSENSG-ASISRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+QVNGG++A+KVD+A+G FEK I +D+VF+KDEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEVQVNGGSVADKVDFAHGLFEKPIEIDSVFEKDEMIDVIAVTKGHGFNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEGNAS-T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|295674007|ref|XP_002797549.1| 60S ribosomal protein L3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280199|gb|EEH35765.1| 60S ribosomal protein L3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286840|gb|EEH42353.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb18]
Length = 392
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 259/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKR+ARHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PG+K+HKKE EAVTI+ETPPM+ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 ERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K + + G S+ +LE+IKKY +VVR+LAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKNHSENTG-ASVSRELERIKKYCTVVRLLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+QVNGG+IA+KVD+A+G FEK I +D+VF++DEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEVQVNGGSIADKVDFAHGLFEKPIQIDSVFEQDEMIDVIAVTKGHGFNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEGNAS-T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|149240189|ref|XP_001525970.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450093|gb|EDK44349.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 389
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/303 (71%), Positives = 262/303 (86%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPP+++VGVVGYV+TPRGLRSL TVWA+HLSEE++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPLVIVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y +D K I+ +L +IKKYASVVRVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYASDA--KQIETELARIKKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I++KVD+A FEK++ VD+VF+++EMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSISDKVDWAKEHFEKEVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++GKGG ES+ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGGDESN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|326911917|ref|XP_003202302.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo]
Length = 403
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 211/293 (72%), Positives = 258/293 (88%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM++VG+VGYV+TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ DEGKK ++ +KKY V+RV+AHTQ+R + L+QKK+H
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEKVD+A E+Q+PV +VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G Q
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQ 292
>gi|255071333|ref|XP_002507748.1| ribosomal protein L3 [Micromonas sp. RCC299]
gi|226523023|gb|ACO69006.1| ribosomal protein L3 [Micromonas sp. RCC299]
Length = 385
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/303 (74%), Positives = 263/303 (86%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPR G LGFLP+KR+ R RGK K FP+DD SK LTAF+G+KAGMTH+VRDV
Sbjct: 1 MSHRKFEHPRLGHLGFLPKKRSQRARGKCKKFPRDDASKEPHLTAFMGFKAGMTHVVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKET EAVTI+ETP M+VVGVVGYVKTP+GLR+LNTVWA+HL++E+RRRFYK
Sbjct: 61 DKPGSKLHKKETLEAVTIVETPAMVVVGVVGYVKTPQGLRALNTVWAEHLNDEIRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+Y +IQ +L+ ++K A VVRV+AHTQ+RK+K LKQKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKYTNG----TIQQELDNLRKNADVVRVIAHTQVRKVKNLKQKKAH 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGG A KVD+AY FFEK IPVDAVF KDEMID I V+KGKG+EGVVTRWGVTR
Sbjct: 177 VMEIQVNGGDAAAKVDFAYKFFEKAIPVDAVFNKDEMIDCISVSKGKGFEGVVTRWGVTR 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKV CIGAWHPARV+FTVAR GQ+GYHHRTE+NKK+Y++GK G++SH T
Sbjct: 237 LPRKTHRGLRKVGCIGAWHPARVAFTVARPGQHGYHHRTEINKKIYRVGKEGEDSHKATT 296
Query: 321 EFD 323
E D
Sbjct: 297 EHD 299
>gi|357443615|ref|XP_003592085.1| L3 Ribosomal protein [Medicago truncatula]
gi|355481133|gb|AES62336.1| L3 Ribosomal protein [Medicago truncatula]
Length = 337
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/251 (88%), Positives = 243/251 (96%)
Query: 73 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSE 132
MTHIVR+VEKPGSKLHKKETCE VTIIETPPM+VVGVVGYVKTPRGLR+LNTVW QHLSE
Sbjct: 1 MTHIVREVEKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSE 60
Query: 133 EVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMK 192
E++RRFYKNWCKSKKKAF+KYSKQYE+DEGKK+IQ QLEK+KKYA+V+RVLAHTQIRKMK
Sbjct: 61 EIKRRFYKNWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMK 120
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
GLKQKKAH+MEIQVNGGTIA+KVD+AY FFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGV
Sbjct: 121 GLKQKKAHIMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGV 180
Query: 253 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG 312
VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGK G
Sbjct: 181 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVG 240
Query: 313 QESHTGITEFD 323
+E+H TEFD
Sbjct: 241 EETHDAQTEFD 251
>gi|58260576|ref|XP_567698.1| large subunit ribosomal protein L3 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134117057|ref|XP_772755.1| 60S ribosomal protein L3 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|50255373|gb|EAL18108.1| hypothetical protein CNBK1290 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229779|gb|AAW46181.1| large subunit ribosomal protein L3, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 390
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 256/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLP+KRAARHRG+ KAFPKDDP KP LTA +GYKAGMTHIVRD+
Sbjct: 1 MSHRKYEEPRHGSLAFLPKKRAARHRGRCKAFPKDDPKKPVHLTAVMGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT+IETPPM+VVG VGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMVVVGAVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ + G S+ +LE+IKKY +VVRVLAHTQI K GL+QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSENSG-ASVARELERIKKYCTVVRVLAHTQISKT-GLQQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+A FEK + V +VF++DE IDIIGVTKG GYEGV RWG TR
Sbjct: 179 LMEIQVNGGSVADKVDFARSHFEKTVDVGSVFEQDECIDIIGVTKGHGYEGVTARWGTTR 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP+ V F+VARAGQ GYH RT MN K+Y++ G S +G T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSNVMFSVARAGQRGYHSRTSMNHKIYRIANGASGS-SGST 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|321263851|ref|XP_003196643.1| large subunit ribosomal protein L3 [Cryptococcus gattii WM276]
gi|317463120|gb|ADV24856.1| Large subunit ribosomal protein L3, putative [Cryptococcus gattii
WM276]
Length = 390
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 256/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLP+KRAARHRG+ KAFPKDDP KP LTA +GYKAGMTHIVRD+
Sbjct: 1 MSHRKYEEPRHGSLAFLPKKRAARHRGRCKAFPKDDPKKPVHLTAVMGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT+IETPPM+VVG VGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMVVVGAVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ + G S+ +LE+IKKY +VVRVLAHTQI K GL+QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSENSG-ASVARELERIKKYCTVVRVLAHTQISKT-GLQQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+A FEK + V +VF++DE IDIIGVTKG GYEGV RWG TR
Sbjct: 179 LMEIQVNGGSVADKVDFARSHFEKTVEVGSVFEQDECIDIIGVTKGHGYEGVTARWGTTR 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP+ V F+VARAGQ GYH RT MN K+Y++ G S +G T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSNVMFSVARAGQRGYHSRTSMNHKIYRIANGASGS-SGST 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|57525400|ref|NP_001006241.1| 60S ribosomal protein L3 [Gallus gallus]
gi|53132964|emb|CAG31951.1| hypothetical protein RCJMB04_14e22 [Gallus gallus]
Length = 403
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/293 (71%), Positives = 258/293 (88%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM++VG+VGYV+TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +EGKK ++ +KKY V+RV+AHTQ+R + L+QKK+H
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEKVD+A E+Q+PV +VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G Q
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQ 292
>gi|119190755|ref|XP_001245984.1| 60S ribosomal protein L3 [Coccidioides immitis RS]
gi|303315241|ref|XP_003067628.1| 60S ribosomal protein L3 [Coccidioides posadasii C735 delta SOWgp]
gi|240107298|gb|EER25483.1| 60S ribosomal protein L3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035569|gb|EFW17510.1| 60S ribosomal protein L3 [Coccidioides posadasii str. Silveira]
gi|392868822|gb|EAS34621.2| 60S ribosomal protein L3 [Coccidioides immitis RS]
Length = 392
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 260/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLPRKR+ARHRGKVK+FPKDDP KP LTA +GYKAGMT VRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTTVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAVTIIETPPM+ VG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPMIAVGIVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K Y ++G S+ +LE+IKKY +VVR+LAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKSYSENKG-ASVTRELERIKKYCTVVRLLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++ EKVD+A+G FEK I +D+VF++DEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVPEKVDFAHGLFEKPIEIDSVFEQDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N K+Y++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKIYRIGKGSDEGNAS-T 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|407929355|gb|EKG22187.1| Ribosomal protein L3 [Macrophomina phaseolina MS6]
Length = 392
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 259/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+KLHKKE EA T+IETPPM+ +GVVGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPMIAIGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+KQ+ ++ G KSI +LE+IKKY +VVRVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKQH-SENGGKSITRELERIKKYCTVVRVLAHTQISKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+QVNGG++AEKVD+A G FEK I V ++F++DEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEVQVNGGSVAEKVDFAQGLFEKPIEVSSIFEQDEMIDVIAVTKGHGFNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK G+++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGK-GEDAGNAST 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|396472938|ref|XP_003839232.1| similar to 60S ribosomal protein L3 [Leptosphaeria maculans JN3]
gi|312215801|emb|CBX95753.1| similar to 60S ribosomal protein L3 [Leptosphaeria maculans JN3]
Length = 392
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGM+ IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMSTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+KLHKKE EAVTIIETPPM+ VG+VGY++TPRGLRSL TVWA+HLS+EV+RRFY+
Sbjct: 61 DRPGAKLHKKEIVEAVTIIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI A+LE++KKY +V+RVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-ASITAELERMKKYCTVIRVLAHTQISKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV YA+G FEK I + ++F+ +EMID+I VTKGKGY GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVSYAHGLFEKPIEISSIFEANEMIDVIAVTKGKGYNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N K+Y++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQMGYHHRTSVNHKIYRIGKGEDEGNAS-T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|346972435|gb|EGY15887.1| 60S ribosomal protein L3 [Verticillium dahliae VdLs.17]
Length = 391
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 257/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAV+II+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EVRRRFY+
Sbjct: 61 DRPGAKAHKKEVVEAVSIIDTPPMVVVGIVGYIETPRGLRSLTTVWAEHLSDEVRRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ G SI ++E+IKKY SVVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITREIERIKKYCSVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+ YG FEK++ VD +F++DEMID+I VTKGKG+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFGYGLFEKEVSVDTIFEQDEMIDVIAVTKGKGFNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++ K G E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIAKAGAED-SAST 297
Query: 321 EFD 323
E D
Sbjct: 298 ELD 300
>gi|405123316|gb|AFR98081.1| large subunit ribosomal protein L3 [Cryptococcus neoformans var.
grubii H99]
Length = 390
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 255/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLPRKRAARHRG+ KAFPKDDP KP LTA +GYKAGMTHIVRD+
Sbjct: 1 MSHRKYEEPRHGSLAFLPRKRAARHRGRCKAFPKDDPKKPVHLTAVMGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT+IETPPM+VVG VGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMVVVGAVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ + G S+ + E+IKKY +VVRVLAHTQI K GL+QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSENSG-ASVAREFERIKKYCTVVRVLAHTQISKT-GLQQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+A FEK + V +VF++DE IDIIGV+KG GYEGV RWG TR
Sbjct: 179 LMEIQVNGGSVADKVDFARSHFEKTVDVGSVFEQDECIDIIGVSKGHGYEGVTARWGTTR 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP+ V F+VARAGQ GYH RT MN K+Y++ G S +G T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSNVMFSVARAGQRGYHSRTSMNHKIYRIANGASGS-SGST 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|170111497|ref|XP_001886952.1| 60S ribosomal protein L3 [Laccaria bicolor S238N-H82]
gi|164637995|gb|EDR02275.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 388
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/303 (69%), Positives = 260/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAVMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT+IETPPM+VVG+VGYV+TPRGLR+L TVWA HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMIVVGLVGYVETPRGLRTLTTVWASHLSDEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ D G KS+ +LE+I+KY +VVRVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHAED-GGKSVARELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG+IA+KV++ FEK + V VF++DE +D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQLNGGSIADKVEFGQALFEKPVEVSTVFEQDECVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G G E++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGTDEANAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 ESD 300
>gi|302833677|ref|XP_002948402.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
carteri f. nagariensis]
gi|300266622|gb|EFJ50809.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
carteri f. nagariensis]
Length = 386
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/303 (77%), Positives = 267/303 (88%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPR GSLGF PRKR R RGKVK+FP+DD SKP LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRSGSLGFSPRKRCRRGRGKVKSFPRDDASKPVHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIE PPM+VVGVVGYVKTPRGLRSLNTVWA+HLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIECPPMVVVGVVGYVKTPRGLRSLNTVWAEHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+Y +GKK+I+A+L +KK+ SV+RVLAHTQ++K+ G QKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKY--SDGKKAIEAELASLKKHCSVIRVLAHTQVKKL-GFGQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+EIQVNGGT+A+KVD+AY FEKQ+ VDAVFQ +EMID I +TKG G +GVV RWGVTR
Sbjct: 178 LIEIQVNGGTVAQKVDFAYAMFEKQVSVDAVFQPNEMIDTIAITKGHGVQGVVQRWGVTR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ G+HHRTE+NKKVYK+GK G+ SH T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFHHRTEINKKVYKIGKKGEASHLATT 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|302412909|ref|XP_003004287.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102]
gi|261356863|gb|EEY19291.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102]
Length = 391
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAV+II+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EVRRRFY+
Sbjct: 61 DRPGAKAHKKEVVEAVSIIDTPPMVVVGLVGYIETPRGLRSLATVWAEHLSDEVRRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ G SI ++E+IKKY SVVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITREIERIKKYCSVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+ YG FEK++ VD++F++DEMID+I VTKGKG+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFGYGLFEKEVSVDSIFEQDEMIDVIAVTKGKGFNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++ K G E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIAKAGAED-SAST 297
Query: 321 EFD 323
E D
Sbjct: 298 ELD 300
>gi|336373266|gb|EGO01604.1| hypothetical protein SERLA73DRAFT_132009 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386114|gb|EGO27260.1| 60S ribosomal protein L3 [Serpula lacrymans var. lacrymans S7.9]
Length = 388
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 261/303 (86%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVK+FP+DDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPRDDPKKPVHLTATMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVTI+ETPP++VVGVVGYV+TPRGLR+L TVWA HLS+EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTIVETPPLIVVGVVGYVETPRGLRTLTTVWASHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ D G KS +LE+I+KY +VVRVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHAEDNG-KSTARELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++++ FEK + V +VF++DE ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFSHNLFEKPVEVTSVFEQDENIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G G + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGAGTDDGNAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 ESD 300
>gi|308323287|gb|ADO28780.1| 60S ribosomal protein l3 [Ictalurus punctatus]
Length = 403
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 209/291 (71%), Positives = 255/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDP+KP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPTKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPMMVVG+VGYV+TPRGLRS TV+A+H+S+E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMMVVGIVGYVETPRGLRSFKTVFAEHISDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYSK+++ DEGKK ++ +KKY V+R++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYSKKWQDDEGKKQLEKDFSSMKKYCKVIRIIAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTI+EKVD+A E+ +P++ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEIQLNGGTISEKVDWAREKLEQAVPINNVFSQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEVNKKIYKIGQG 290
>gi|443731990|gb|ELU16883.1| hypothetical protein CAPTEDRAFT_21042 [Capitella teleta]
Length = 414
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/309 (69%), Positives = 260/309 (84%), Gaps = 7/309 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVKAFPKDDPSKP LT+FL YKAGMTH+VR+V
Sbjct: 11 MSHRKFSAPRHGSLGFLPRKRSTRHRGKVKAFPKDDPSKPVHLTSFLAYKAGMTHVVREV 70
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HKKE +AVTI+E PPM+ +GV+GY++TPRGLR+L TVWA+HLSEE RRRFYK
Sbjct: 71 DRPGSKAHKKEVVDAVTILEAPPMIAIGVIGYIETPRGLRALKTVWAEHLSEECRRRFYK 130
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFTK SK+++ + GKK I+ L K+KKY SV+RV+AHTQ++ +K +QKKAH
Sbjct: 131 NWYRSKKKAFTKASKKWQDEVGKKEIEKDLAKMKKYCSVIRVIAHTQMKLLKK-RQKKAH 189
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGT+A+KVD+A FEKQIPVD+VF DEMID IGVTKG G++GV +RW +
Sbjct: 190 IMEIQVNGGTVAQKVDWAREHFEKQIPVDSVFAPDEMIDCIGVTKGHGFKGVTSRWHTKK 249
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES----- 315
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+Y++GKG
Sbjct: 250 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYRMGKGVHTENGKLI 309
Query: 316 -HTGITEFD 323
+ G TE+D
Sbjct: 310 KNNGSTEYD 318
>gi|224095133|ref|XP_002198398.1| PREDICTED: 60S ribosomal protein L3-like [Taeniopygia guttata]
Length = 403
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/293 (71%), Positives = 257/293 (87%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTIIETPPM++VG+VGYV+TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIIETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKK+H
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEKVD+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVDWAREKLEQQVPVATVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G Q
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQ 292
>gi|402217655|gb|EJT97735.1| 60S ribosomal protein L3 [Dacryopinax sp. DJM-731 SS1]
Length = 395
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 259/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG+LGFLPRKRAARHRGKVK+FPKDDP K LTA + YKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGNLGFLPRKRAARHRGKVKSFPKDDPKKKPHLTAAMAYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVTI+ETPPM+VVGVVGYV+TPRGLRSL TVWA HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTILETPPMIVVGVVGYVETPRGLRSLTTVWASHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT+Y+K++ + G KSI +LE+I+KY +VVRVLAHTQ+ K GL+QKKAH
Sbjct: 121 NWYKSKKKAFTRYAKKH-AENGGKSIARELERIRKYCTVVRVLAHTQLSKT-GLRQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++ EKVD+A G FEK + + +F++DE +D+I VTKG G+EGV RWG R
Sbjct: 179 LMEIQVNGGSVGEKVDFAKGLFEKPVEISTIFEQDECVDVIAVTKGHGFEGVTHRWGTKR 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G G ES+ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGADESNAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EAD 300
>gi|395819741|ref|XP_003783238.1| PREDICTED: 60S ribosomal protein L3 [Otolemur garnettii]
Length = 403
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/291 (71%), Positives = 257/291 (88%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D+GKK ++ +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|452819751|gb|EME26804.1| 60S ribosomal protein L3 isoform 2 [Galdieria sulphuraria]
gi|452819752|gb|EME26805.1| 60S ribosomal protein L3 isoform 1 [Galdieria sulphuraria]
Length = 388
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/304 (74%), Positives = 261/304 (85%), Gaps = 5/304 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKRA R RG++KAFPKDD SKPC LT FL YKAGMTH+VRDV
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRARRQRGRIKAFPKDDSSKPCHLTGFLSYKAGMTHVVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EAVTI+E PPM+VVG+VGY++TPRGLRSL TVWA+HLS+E +RRFYK
Sbjct: 61 DKPGSKLHKKEVVEAVTILEAPPMVVVGIVGYIETPRGLRSLKTVWAEHLSDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSK-QYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
NW KSKKKAFTKY+K +YE +G ++I+ LEK+KKY SV+RVL HTQ+RK+ + QKKA
Sbjct: 121 NWYKSKKKAFTKYAKVKYE--QGGEAIKRDLEKMKKYCSVIRVLVHTQMRKL-NIGQKKA 177
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+ EIQVNGGT+AEKVD+A G FEK + VD VF KDEMID IGVTKGKG+EGV+ RWGVT
Sbjct: 178 HIAEIQVNGGTVAEKVDFATGLFEKTVSVDQVFSKDEMIDAIGVTKGKGFEGVIHRWGVT 237
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
RLPRKTHRGLRKVACIGAWHPAR+ F+V RAGQNGYHHRT+MN K+Y++ KG +G
Sbjct: 238 RLPRKTHRGLRKVACIGAWHPARIQFSVPRAGQNGYHHRTQMNLKIYRIAKGNNLK-SGS 296
Query: 320 TEFD 323
TEFD
Sbjct: 297 TEFD 300
>gi|38454246|ref|NP_942048.1| 60S ribosomal protein L3 [Rattus norvegicus]
gi|132958|sp|P21531.3|RL3_RAT RecName: Full=60S ribosomal protein L3; AltName: Full=L4
gi|57698|emb|CAA44095.1| ribosomal protein L3 [Rattus rattus]
gi|37231753|gb|AAH58494.1| Ribosomal protein L3 [Rattus norvegicus]
gi|149065896|gb|EDM15769.1| ribosomal protein L3, isoform CRA_b [Rattus norvegicus]
Length = 403
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/291 (71%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|119481241|ref|XP_001260649.1| 60S ribosomal protein L3 [Neosartorya fischeri NRRL 181]
gi|119408803|gb|EAW18752.1| transcriptional corepressor Cyc8, putative [Neosartorya fischeri
NRRL 181]
Length = 392
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAVTIIETPP++ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEESG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+A FEK I +D++F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N KV+++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEGNAS-T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|121715726|ref|XP_001275472.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
gi|119403629|gb|EAW14046.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
Length = 392
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 257/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAVTIIETPP++ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+KQ+ + G S+ +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKQHAEESG-ASVTRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG +A+KVD+A FEK I +D++F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGAVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N KV+++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGTDEGNAS-T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|4506649|ref|NP_000958.1| 60S ribosomal protein L3 isoform a [Homo sapiens]
gi|302148475|ref|NP_001180483.1| ribosomal protein L3 [Macaca mulatta]
gi|397502001|ref|XP_003821661.1| PREDICTED: 60S ribosomal protein L3 isoform 1 [Pan paniscus]
gi|402884272|ref|XP_003905611.1| PREDICTED: 60S ribosomal protein L3 [Papio anubis]
gi|426394514|ref|XP_004063540.1| PREDICTED: 60S ribosomal protein L3 isoform 1 [Gorilla gorilla
gorilla]
gi|730565|sp|P39023.2|RL3_HUMAN RecName: Full=60S ribosomal protein L3; AltName: Full=HIV-1 TAR
RNA-binding protein B; Short=TARBP-B
gi|313659|emb|CAA51839.1| ribosomal protein L3 [Homo sapiens]
gi|12803201|gb|AAH02408.1| Ribosomal protein L3 [Homo sapiens]
gi|13623709|gb|AAH06483.1| Ribosomal protein L3, isoform a [Homo sapiens]
gi|14124954|gb|AAH08003.1| Ribosomal protein L3 [Homo sapiens]
gi|15082461|gb|AAH12146.1| Ribosomal protein L3 [Homo sapiens]
gi|15215372|gb|AAH12786.1| Ribosomal protein L3 [Homo sapiens]
gi|15489128|gb|AAH13674.1| Ribosomal protein L3 [Homo sapiens]
gi|15559314|gb|AAH14017.1| Ribosomal protein L3 [Homo sapiens]
gi|15929157|gb|AAH15032.1| Ribosomal protein L3, isoform a [Homo sapiens]
gi|16041773|gb|AAH15767.1| Ribosomal protein L3 [Homo sapiens]
gi|21104408|dbj|BAB93474.1| ribosomal protein L3 [Homo sapiens]
gi|39794638|gb|AAH63662.1| Ribosomal protein L3 [Homo sapiens]
gi|47678663|emb|CAG30452.1| RPL3 [Homo sapiens]
gi|56972440|gb|AAH88373.1| Ribosomal protein L3 [Homo sapiens]
gi|78395076|gb|AAI07712.1| Ribosomal protein L3 [Homo sapiens]
gi|90075246|dbj|BAE87303.1| unnamed protein product [Macaca fascicularis]
gi|90076620|dbj|BAE87990.1| unnamed protein product [Macaca fascicularis]
gi|90076640|dbj|BAE88000.1| unnamed protein product [Macaca fascicularis]
gi|109451472|emb|CAK54597.1| RPL3 [synthetic construct]
gi|109452068|emb|CAK54896.1| RPL3 [synthetic construct]
gi|119580714|gb|EAW60310.1| ribosomal protein L3, isoform CRA_a [Homo sapiens]
gi|189055072|dbj|BAG38056.1| unnamed protein product [Homo sapiens]
gi|261859736|dbj|BAI46390.1| ribosomal protein L3 [synthetic construct]
Length = 403
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/291 (71%), Positives = 257/291 (88%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|348569536|ref|XP_003470554.1| PREDICTED: 60S ribosomal protein L3-like [Cavia porcellus]
Length = 403
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/291 (72%), Positives = 254/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLRS TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRSFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GKK + +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDMGKKQLDKDFSSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+QIPV VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWAREKLEQQIPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|343959926|dbj|BAK63820.1| 60S ribosomal protein L3 [Pan troglodytes]
Length = 403
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/291 (71%), Positives = 257/291 (88%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|354494770|ref|XP_003509508.1| PREDICTED: 60S ribosomal protein L3-like [Cricetulus griseus]
gi|344245574|gb|EGW01678.1| 60S ribosomal protein L3 [Cricetulus griseus]
Length = 403
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/291 (71%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDMGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|60654345|gb|AAX29863.1| ribosomal protein L3 [synthetic construct]
Length = 404
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/291 (71%), Positives = 257/291 (88%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|449271919|gb|EMC82093.1| 60S ribosomal protein L3 [Columba livia]
Length = 409
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/292 (71%), Positives = 255/292 (87%), Gaps = 1/292 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 8 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 67
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTIIETPPM++VG+VGYVKTP GLRS T++A+H+S+E +RRFYKN
Sbjct: 68 RPGSKVNKKEVVEAVTIIETPPMVIVGIVGYVKTPHGLRSFKTIFAEHISDECKRRFYKN 127
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY K+++ +EGKK ++ +KKY V+RV+AHTQ+R + L+QKK+HL
Sbjct: 128 WHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLP-LRQKKSHL 186
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEKVD+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 187 MEIQVNGGTVAEKVDWAREKLEQQVPVSTVFAQDEMIDVIGVTKGKGYKGVTSRWHTKKL 246
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G Q
Sbjct: 247 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQ 298
>gi|169774881|ref|XP_001821908.1| 60S ribosomal protein L3 [Aspergillus oryzae RIB40]
gi|238496503|ref|XP_002379487.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357]
gi|83769771|dbj|BAE59906.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694367|gb|EED50711.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357]
gi|391868765|gb|EIT77974.1| 60S ribosomal protein [Aspergillus oryzae 3.042]
Length = 392
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 259/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAVT+IETPP++ +GVVGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKMHKKEVVEAVTVIETPPLVAIGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+KQ+ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKQHAEESG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+A FEK I +D++F+KDE+ID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKTIEIDSIFEKDEVIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N KVY++GKG E++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVYRIGKGSDEANAS-T 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|367054940|ref|XP_003657848.1| 60S ribosomal protein L3 [Thielavia terrestris NRRL 8126]
gi|347005114|gb|AEO71512.1| hypothetical protein THITE_2123969 [Thielavia terrestris NRRL 8126]
Length = 392
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 256/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAVTII+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKAHKKEIVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG++A+KVD+ YG FEK + +D +F+KDEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVDFGYGLFEKPVSIDTIFEKDEMIDVIAVTKGHGFVGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKG + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EVD 300
>gi|291389862|ref|XP_002711434.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 403
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/291 (72%), Positives = 254/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GK+ + +KKY V+RVLAHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDAGKRQLDKDFSSMKKYCQVIRVLAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|14250148|gb|AAH08492.1| Ribosomal protein L3 [Homo sapiens]
Length = 403
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/291 (71%), Positives = 257/291 (88%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|296236921|ref|XP_002763538.1| PREDICTED: 60S ribosomal protein L3 isoform 1 [Callithrix jacchus]
Length = 403
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/291 (71%), Positives = 257/291 (88%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT++EK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVSEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|393246426|gb|EJD53935.1| 60S ribosomal protein L3 [Auricularia delicata TFB-10046 SS5]
Length = 388
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/303 (72%), Positives = 269/303 (88%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVK+FP+DDP KP LTAF+GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPRDDPKKPVHLTAFMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSK+HKKE EAVTI+ETPP++VVGVVGYV+TPRGLR+L TVWA HLS+E++RRFYK
Sbjct: 61 ERPGSKMHKKEIVEAVTIVETPPLVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K+ ++G KS+ +LE+I+KYA+VVRVLAHTQIRK GLKQKKAH
Sbjct: 121 NWYRSKKKAFTRYAKK-SAEDGGKSVSRELERIRKYATVVRVLAHTQIRKT-GLKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++A+G FEK + ++AVF++DE+IDII VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAHGLFEKTVDINAVFEQDEVIDIIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++GKG ++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTEINKKIYRIGKGDDAANAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EAD 300
>gi|126339540|ref|XP_001366844.1| PREDICTED: 60S ribosomal protein L3-like [Monodelphis domestica]
Length = 476
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 207/293 (70%), Positives = 256/293 (87%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 74 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 133
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM++VG+VGYV+TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 134 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 193
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D+GKK ++ +KKY V+RV+AHTQ+R + L+QKK+H
Sbjct: 194 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKSH 252
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG ++EK+D+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 253 LMEIQVNGGNVSEKLDWAREKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 312
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G Q
Sbjct: 313 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQ 365
>gi|444723833|gb|ELW64463.1| 60S ribosomal protein L3, partial [Tupaia chinensis]
Length = 402
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/290 (71%), Positives = 256/290 (88%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ T++A+H+S+E +RRFYKN
Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 120
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY K+++ D+GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHL
Sbjct: 121 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 179
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 180 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 239
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 289
>gi|71001672|ref|XP_755517.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293]
gi|83305621|sp|Q8NKF4.2|RL3_ASPFU RecName: Full=60S ribosomal protein L3; AltName: Allergen=Asp f 23
gi|66853155|gb|EAL93479.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293]
gi|159129584|gb|EDP54698.1| 60S ribosomal protein L3 [Aspergillus fumigatus A1163]
Length = 392
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAVTIIETPP++ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+A FEK I +D++F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N KV+++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEGNAS-T 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|52741|emb|CAA68370.1| J1 protein [Mus musculus]
gi|226725|prf||1604248A J1 protein
Length = 403
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/291 (71%), Positives = 255/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+FTVARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|356461025|ref|NP_001239088.1| 60S ribosomal protein L3 [Canis lupus familiaris]
Length = 403
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/291 (71%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D+GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|452988462|gb|EME88217.1| hypothetical protein MYCFIDRAFT_209740 [Pseudocercospora fijiensis
CIRAD86]
Length = 392
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 259/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGM+ IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDPKKPVHLTAAMGYKAGMSTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+KLHKKE EAVT+IETPPMMV+G+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEAVTVIETPPMMVIGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G K+I LE+IKKY +VVRVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSEESG-KNITRDLERIKKYCTVVRVLAHTQISKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++ +G FEK + +D++F++DEMID I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFGHGLFEKPVEIDSIFEQDEMIDCIAVTKGHGFQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGSDDGN-ATT 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|154301761|ref|XP_001551292.1| 60S ribosomal protein L3 [Botryotinia fuckeliana B05.10]
gi|347828492|emb|CCD44189.1| similar to 60S ribosomal protein l3 [Botryotinia fuckeliana]
Length = 392
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDD +KP LTA LGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRASRHRGKVKSFPKDDKTKPVHLTATLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKTHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-SSITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++AEKVD+A G FEK + + ++F++DEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVAEKVDFASGLFEKPVEISSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT N KVY++G+ G + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSCNHKVYRIGR-GDDPNNAAT 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|327239268|gb|AEA39501.1| ribosomal protein L3 [Ailuropoda melanoleuca]
gi|327239370|gb|AEA39552.1| ribosomal protein L3 [Ailuropoda melanoleuca]
Length = 403
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/291 (71%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D+GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQG 290
>gi|119580719|gb|EAW60315.1| ribosomal protein L3, isoform CRA_f [Homo sapiens]
Length = 430
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/290 (71%), Positives = 256/290 (88%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 29 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 88
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYKN
Sbjct: 89 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 148
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHL
Sbjct: 149 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 207
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 208 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 267
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 268 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 317
>gi|301757551|ref|XP_002914602.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca]
Length = 403
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/291 (71%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D+GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQG 290
>gi|403282966|ref|XP_003932901.1| PREDICTED: 60S ribosomal protein L3 [Saimiri boliviensis
boliviensis]
Length = 403
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 257/291 (88%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GK+ ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKRQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT++EK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVSEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|395753420|ref|XP_002831202.2| PREDICTED: 60S ribosomal protein L3 [Pongo abelii]
Length = 418
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 208/290 (71%), Positives = 256/290 (88%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 17 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 76
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYKN
Sbjct: 77 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 136
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHL
Sbjct: 137 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 195
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 196 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 255
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 256 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 305
>gi|453089521|gb|EMF17561.1| 60S ribosomal protein L3 [Mycosphaerella populorum SO2202]
Length = 392
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRAARHRGKVK+FPKDDP + C LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKQKCHLTATMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+KLHKKE EA T+IETPP++VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPIIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G KSI LE+IKKY +VVRVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEESG-KSITRDLERIKKYCTVVRVLAHTQISKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++ +G FEK + +D+VF++DEMID I VTKG GY+GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFGHGLFEKPVEIDSVFEQDEMIDCIAVTKGHGYQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGSDDGN-ATT 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|74185347|dbj|BAE30149.1| unnamed protein product [Mus musculus]
Length = 403
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/291 (71%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GKK ++ + +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFKSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|255308899|ref|NP_038790.2| 60S ribosomal protein L3 [Mus musculus]
gi|341942150|sp|P27659.3|RL3_MOUSE RecName: Full=60S ribosomal protein L3; AltName: Full=J1 protein
gi|16307136|gb|AAH09655.1| Ribosomal protein L3 [Mus musculus]
gi|26354122|dbj|BAC40691.1| unnamed protein product [Mus musculus]
gi|53237049|gb|AAH83134.1| Ribosomal protein L3 [Mus musculus]
gi|62825867|gb|AAH94059.1| Ribosomal protein L3 [Mus musculus]
gi|74138821|dbj|BAE27217.1| unnamed protein product [Mus musculus]
gi|74139413|dbj|BAE40848.1| unnamed protein product [Mus musculus]
gi|74141867|dbj|BAE41003.1| unnamed protein product [Mus musculus]
gi|74142025|dbj|BAE41075.1| unnamed protein product [Mus musculus]
gi|74146286|dbj|BAE28917.1| unnamed protein product [Mus musculus]
gi|74151280|dbj|BAE38773.1| unnamed protein product [Mus musculus]
gi|74184852|dbj|BAE39049.1| unnamed protein product [Mus musculus]
gi|74190533|dbj|BAE25922.1| unnamed protein product [Mus musculus]
gi|74195956|dbj|BAE30536.1| unnamed protein product [Mus musculus]
gi|74198689|dbj|BAE39818.1| unnamed protein product [Mus musculus]
gi|74201222|dbj|BAE26078.1| unnamed protein product [Mus musculus]
gi|74204394|dbj|BAE39950.1| unnamed protein product [Mus musculus]
gi|74207543|dbj|BAE40022.1| unnamed protein product [Mus musculus]
gi|74207577|dbj|BAE40037.1| unnamed protein product [Mus musculus]
gi|74207702|dbj|BAE40095.1| unnamed protein product [Mus musculus]
gi|74207706|dbj|BAE40097.1| unnamed protein product [Mus musculus]
gi|74212023|dbj|BAE40178.1| unnamed protein product [Mus musculus]
gi|74220011|dbj|BAE40585.1| unnamed protein product [Mus musculus]
gi|74221090|dbj|BAE42051.1| unnamed protein product [Mus musculus]
gi|148672669|gb|EDL04616.1| mCG11520, isoform CRA_b [Mus musculus]
gi|187956900|gb|AAI58040.1| Ribosomal protein L3 [Mus musculus]
Length = 403
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/291 (71%), Positives = 255/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|74181618|dbj|BAE30074.1| unnamed protein product [Mus musculus]
Length = 403
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/291 (71%), Positives = 255/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|74191638|dbj|BAE30390.1| unnamed protein product [Mus musculus]
gi|74198856|dbj|BAE30653.1| unnamed protein product [Mus musculus]
Length = 403
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/291 (71%), Positives = 255/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|412994087|emb|CCO14598.1| 60S ribosomal protein L3 [Bathycoccus prasinos]
Length = 413
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/296 (70%), Positives = 254/296 (85%), Gaps = 4/296 (1%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 87
+PR G LGFLP+KR+ R RGKVK+FPKDD SKP TAF+G+KAGMTHIVRDV+KPGSKL
Sbjct: 36 NPRLGHLGFLPKKRSQRSRGKVKSFPKDDASKPPHFTAFMGFKAGMTHIVRDVDKPGSKL 95
Query: 88 HKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKK 147
HKKETCEAVTI+E P M+VVG+VGY +TP+GLR + TVWA+HLS+E++RRFYKNW KSKK
Sbjct: 96 HKKETCEAVTIVECPQMIVVGLVGYRRTPQGLRGVKTVWAEHLSDEIKRRFYKNWFKSKK 155
Query: 148 KAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVN 207
KAF KY+K+Y SI+ LE +KK VVRV+AHTQ+RK+K LKQKKAH+MEIQ+N
Sbjct: 156 KAFQKYAKKYSNG----SIEQDLEALKKSCDVVRVIAHTQVRKVKNLKQKKAHMMEIQIN 211
Query: 208 GGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 267
GG++A+KVD+ + FFEK +PVDAVFQ+DEMID+I VTKGKG+EGV+TRWGVTRLPRKTHR
Sbjct: 212 GGSVADKVDFGFKFFEKAVPVDAVFQQDEMIDVIAVTKGKGFEGVITRWGVTRLPRKTHR 271
Query: 268 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
GLRKVACIG+WHPARV+++VAR GQ+GYHHRTE+NKK+YK+GK + S T+ D
Sbjct: 272 GLRKVACIGSWHPARVAYSVARPGQHGYHHRTEINKKIYKIGKADEASFGANTDHD 327
>gi|156065829|ref|XP_001598836.1| 60S ribosomal protein L3 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154691784|gb|EDN91522.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 392
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDD +KP LTA LGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRASRHRGKVKSFPKDDKTKPVHLTATLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKTHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-SSITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++AEKVD+A G FEK + + ++F++DEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVAEKVDFASGLFEKPVEIGSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT N KVY++G+ G + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSCNHKVYRIGR-GDDPNNAAT 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|344228878|gb|EGV60764.1| 60S ribosomal protein L3 [Candida tenuis ATCC 10573]
Length = 388
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 255/303 (84%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKRAARH+GK+K+FPKD+ SKP LTAFLGYKAGMT +VRD+
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRAARHQGKIKSFPKDNKSKPVSLTAFLGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPP+++VGVVGYV+TPRGLRSL TVWA+HLSEE+RRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPLVIVGVVGYVETPRGLRSLTTVWAEHLSEEIRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D SI+ +L +I KYASVVRVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYAKDPA--SIERELARINKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG++A+KV +A FEK + VD+VF+ EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVADKVAWAQEHFEKTVSVDSVFEDGEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++GK G ES +G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKAGDES-SGAT 296
Query: 321 EFD 323
+D
Sbjct: 297 SYD 299
>gi|358055153|dbj|GAA98922.1| hypothetical protein E5Q_05610 [Mixia osmundae IAM 14324]
Length = 387
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/303 (73%), Positives = 264/303 (87%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVKAFPKDDP KP LTAF+GYKAGMTHIVR++
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAFMGYKAGMTHIVREL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSK+HKKE EAVTIIETPP+ VVGVVGYV+TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 ERPGSKMHKKEIVEAVTIIETPPVNVVGVVGYVETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFTKY+K++ EG S+ ++E+IKKY +VVRVLAHTQIRK GLKQKKAH
Sbjct: 121 NWYRSKKKAFTKYAKKHA--EGGASVSREMERIKKYCTVVRVLAHTQIRKT-GLKQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG+IA+KVD+A FEK I V AVF++D+ IDIIGVTKGKG+EGV RWG +
Sbjct: 178 LMEIQINGGSIADKVDFAKSHFEKPIEVSAVFEQDQNIDIIGVTKGKGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE NKK+Y++G G + + T
Sbjct: 238 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTEKNKKIYRIGSGADDKNAS-T 296
Query: 321 EFD 323
E+D
Sbjct: 297 EYD 299
>gi|449300493|gb|EMC96505.1| hypothetical protein BAUCODRAFT_24265 [Baudoinia compniacensis UAMH
10762]
Length = 392
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 256/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRAARHRGKVK+FPKDDP K LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKAVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EA T+IETPPM+VVG+VGY++TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGAKNHKKEIVEACTVIETPPMIVVGLVGYIETPRGLRSLKTVWAEHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ DE K+I LE+IKKY +VVRVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKH-ADESGKNITQDLERIKKYCTVVRVLAHTQISKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++++KVDYA+G FEK + +D VF++DEMID I VTKG GY+GV +RWG +
Sbjct: 179 LMEIQVNGGSLSDKVDYAHGLFEKPVEIDNVFEQDEMIDCIAVTKGHGYQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRVGKGSDEGNAS-T 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|425765902|gb|EKV04543.1| Transcriptional corepressor Cyc8, putative [Penicillium digitatum
PHI26]
gi|425779237|gb|EKV17313.1| Transcriptional corepressor Cyc8, putative [Penicillium digitatum
Pd1]
Length = 1267
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/307 (68%), Positives = 257/307 (83%), Gaps = 3/307 (0%)
Query: 17 QRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI 76
R +MSHRKFE PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT +
Sbjct: 872 NRVKMSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTASMGYKAGMTTV 931
Query: 77 VRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRR 136
VRD+++PG+K+HKKE EAVT+IETPP++ VGVVGY++TPRGLRSL TVWA+HLS+EV+R
Sbjct: 932 VRDLDRPGAKMHKKEIVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKR 991
Query: 137 RFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQ 196
RFYKNW KSKKKAFTKY+K + G SI +LE+I+KY +VVRVLAHTQIR+ +KQ
Sbjct: 992 RFYKNWYKSKKKAFTKYAKSHAESSG-ASITRELERIQKYCTVVRVLAHTQIRQTP-IKQ 1049
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
KKAHLMEIQVNGG++++KV++A FEK I +D++F+KDEMID+I VTKG G+ GV +RW
Sbjct: 1050 KKAHLMEIQVNGGSVSDKVEFARNLFEKTIDIDSIFEKDEMIDVIAVTKGHGFSGVTSRW 1109
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
G T+LPRKTH+GLRKVACIGAWHP V +TVARAGQ+GYHHRT N K++++GKG E +
Sbjct: 1110 GTTKLPRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSCNHKIFRIGKGSDEGN 1169
Query: 317 TGITEFD 323
TEFD
Sbjct: 1170 AS-TEFD 1175
>gi|119580717|gb|EAW60313.1| ribosomal protein L3, isoform CRA_d [Homo sapiens]
Length = 429
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/290 (71%), Positives = 256/290 (88%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 28 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 87
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYKN
Sbjct: 88 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 147
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHL
Sbjct: 148 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 206
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 207 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 266
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 267 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 316
>gi|395541568|ref|XP_003772714.1| PREDICTED: 60S ribosomal protein L3-like [Sarcophilus harrisii]
Length = 428
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/292 (70%), Positives = 256/292 (87%), Gaps = 1/292 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDP+KP LTAFLGYKAGMTHIVR+V+
Sbjct: 27 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPTKPIHLTAFLGYKAGMTHIVREVD 86
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPPM++VG+VGYV+TPRGLRS T++A+H+S+E +RRFYKN
Sbjct: 87 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYKN 146
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY K+++ D+GKK ++ +KKY V+RV+AHTQ+R + L+QKK+HL
Sbjct: 147 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKSHL 205
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGG+++EK+D+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 206 MEIQVNGGSVSEKLDWAREKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 265
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G Q
Sbjct: 266 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQ 317
>gi|346227212|ref|NP_001230992.1| ribosomal protein L3 [Sus scrofa]
Length = 403
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/291 (70%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM++VG+VGYV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|281351162|gb|EFB26746.1| hypothetical protein PANDA_002530 [Ailuropoda melanoleuca]
Length = 403
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/290 (71%), Positives = 255/290 (87%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V+
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ T++A+H+S+E +RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 121
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY K+++ D+GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHL
Sbjct: 122 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 180
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQG 290
>gi|116204627|ref|XP_001228124.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51]
gi|88176325|gb|EAQ83793.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51]
Length = 392
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 256/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAVTII+TPPMMVVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMMVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG++A+KV++ +G FEK + VD++F+KDEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVEFGHGLFEKPVSVDSIFEKDEMIDVIAVTKGHGFSGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADD-SAAT 297
Query: 321 EFD 323
E D
Sbjct: 298 EID 300
>gi|212536953|ref|XP_002148632.1| 60S ribosomal protein L3 [Talaromyces marneffei ATCC 18224]
gi|210068374|gb|EEA22465.1| 60S ribosomal protein L3 [Talaromyces marneffei ATCC 18224]
Length = 392
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/303 (68%), Positives = 259/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAVT+IETPP++ VGVVGY++TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGAKMHKKEVVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT+Y+K++ T+ S+ +LE+IKKY +VVR+LAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTRYTKKH-TESSAASVTRELERIKKYCTVVRILAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++A+G FEK I +D +F+++E+ID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAHGLFEKTIDIDTIFEQNEVIDVIAVTKGHGFNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGSDEGNAS-T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|332028947|gb|EGI68965.1| 60S ribosomal protein L3 [Acromyrmex echinatior]
Length = 484
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 255/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 71 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 130
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGY++TP GLR+L TVWA+HLSE+ RRRFYK
Sbjct: 131 DRPGSKVNKKEIVEAVTILETPPMIVVGLVGYIETPHGLRALATVWAEHLSEDCRRRFYK 190
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK+++ D G+KSI+A L+KIKKY SVVR++AHTQ++ ++ +QKKAH
Sbjct: 191 NWYKSKKKAFTKASKKWQDDLGRKSIEADLKKIKKYCSVVRIIAHTQMKLLRQ-RQKKAH 249
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTI +KV +A EK +P+ +VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 250 IMEIQLNGGTIEDKVQWAREHLEKPVPISSVFASDEMIDVIGVTKGKGYKGVTSRWHTKK 309
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 310 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 360
>gi|149743311|ref|XP_001501957.1| PREDICTED: 60S ribosomal protein L3 [Equus caballus]
Length = 403
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/291 (70%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++G+K ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGRKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|74186276|dbj|BAE42921.1| unnamed protein product [Mus musculus]
Length = 403
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 254/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGM HIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMIHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|332858660|ref|XP_001150138.2| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Pan
troglodytes]
Length = 395
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+ V+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIHVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+A+K+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAKKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|21215170|gb|AAM43909.1|AF464911_1 large subunit ribosomal protein L3 [Aspergillus fumigatus]
Length = 392
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 257/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLPRKRAARHRGKVK+FPK DP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKYDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAVTIIETPP++ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+A FEK I +D++F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N KV+++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEGNAS-T 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|6537320|gb|AAF15600.1|AF198447_1 60S ribosomal protein L3 [Emericella nidulans]
gi|259479602|tpe|CBF69975.1| TPA: 60S ribosomal protein L3 [Source:UniProtKB/TrEMBL;Acc:Q9UV31]
[Aspergillus nidulans FGSC A4]
Length = 392
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/303 (69%), Positives = 256/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRG+VK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGRVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EA T+IETPP++ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAATVIETPPLIAVGVVGYIETPRGLRSLATVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSEENG-ASITRDLERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++AEKVD+A FEK I +D +F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVAEKVDFARNLFEKPIEIDTIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N KV+++GKG E++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEANAS-T 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|402589180|gb|EJW83112.1| 50S ribosomal protein L3 [Wuchereria bancrofti]
Length = 396
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/306 (68%), Positives = 259/306 (84%), Gaps = 4/306 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+G+KAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPSKPIHLTAFMGFKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVT++ETPPM++VGVVGY+ TPRG R TVWA+HLSE+ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAF K++K+++ ++G KSIQA L K+KKY S++RV+AHTQ++ MK ++KKAH
Sbjct: 121 NWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVIAHTQMKVMKH-REKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI EKVD+AY FEKQ+PVD+VF +DEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTIPEKVDWAYEHFEKQVPVDSVFAQDEMIDTIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHT 317
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y++ K +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRIAKSCLTEEGRRN 299
Query: 318 GITEFD 323
G T++D
Sbjct: 300 GGTDYD 305
>gi|319079393|ref|NP_001187033.1| ribosomal protein L3 [Ictalurus punctatus]
gi|15293867|gb|AAK95126.1|AF401554_1 ribosomal protein L3 [Ictalurus punctatus]
Length = 402
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/291 (71%), Positives = 254/291 (87%), Gaps = 2/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKRAA RGKVK+FPKDDP+KP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRAA-SRGKVKSFPKDDPTKPVHLTAFLGYKAGMTHIVREV 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPMMVVG+VGYV+TPRGLRS TV+A+H+S+E RRRFYK
Sbjct: 60 DRPGSKVNKKEVVEAVTIVETPPMMVVGIVGYVETPRGLRSFKTVFAEHISDECRRRFYK 119
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYSK+++ DEGKK ++ +KKY V+R++AHTQ+R + L+QKK+H
Sbjct: 120 NWYKSKKKAFTKYSKKWQDDEGKKQLEKDFSSMKKYCKVIRIIAHTQMRLLP-LRQKKSH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTI+EKVD+A E+ +P++ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 179 LMEIQLNGGTISEKVDWAREKLEQAVPINNVFSQDEMIDVIGVTKGHGYKGVTSRWHTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 239 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEVNKKIYKIGQG 289
>gi|74185237|dbj|BAE30097.1| unnamed protein product [Mus musculus]
Length = 403
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 254/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTK KGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKDKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|367035414|ref|XP_003666989.1| hypothetical protein MYCTH_2312253 [Myceliophthora thermophila ATCC
42464]
gi|347014262|gb|AEO61744.1| hypothetical protein MYCTH_2312253 [Myceliophthora thermophila ATCC
42464]
Length = 391
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 256/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAVTII+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMVVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G +I +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-AAITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGT+AEKVD+ +G FEK + +D +F+KDE+ID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGTVAEKVDFGHGLFEKPVSIDTIFEKDEIIDVIAVTKGHGFTGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKG + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-T 297
Query: 321 EFD 323
+ D
Sbjct: 298 DVD 300
>gi|452001707|gb|EMD94166.1| hypothetical protein COCHEDRAFT_1130499 [Cochliobolus
heterostrophus C5]
Length = 392
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+KLHKKE EA T+IETPPM+ VG+VGY++TPRGLRSL TVWA+HLS+EV+RRFY+
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G +SI +LE+IKKY +VVRVLAHTQI K L+QKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-QSITRELERIKKYCTVVRVLAHTQISKTP-LQQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KV++ +G FEK I + +VF+ +EMID+I VTKGKG+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFGHGLFEKPIEITSVFEDNEMIDVIAVTKGKGFNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT +N K+Y++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSVNHKIYRIGKGDDEGNAS-T 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|170578047|ref|XP_001894243.1| 60S ribosomal protein L3 [Brugia malayi]
gi|158599245|gb|EDP36917.1| 60S ribosomal protein L3, putative [Brugia malayi]
Length = 430
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/306 (68%), Positives = 259/306 (84%), Gaps = 4/306 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+G+KAGMTHIVR+V
Sbjct: 35 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPSKPIHLTAFMGFKAGMTHIVREV 94
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVT++ETPPM++VGVVGY+ TPRG R TVWA+HLSE+ RRRFYK
Sbjct: 95 DKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 154
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAF K++K+++ ++G KSIQA L K+KKY S++RV+AHTQ++ MK ++KKAH
Sbjct: 155 NWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVIAHTQMKVMKH-REKKAH 213
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGT+ EKVD+AY FEKQ+PVD+VF +DEMID IGVTKGKG++GV +RW +
Sbjct: 214 IMEIQVNGGTVPEKVDWAYEHFEKQVPVDSVFAQDEMIDTIGVTKGKGFKGVTSRWHTKK 273
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHT 317
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y++ K +
Sbjct: 274 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRIAKSCLTEEGRRN 333
Query: 318 GITEFD 323
G T++D
Sbjct: 334 GGTDYD 339
>gi|451849886|gb|EMD63189.1| hypothetical protein COCSADRAFT_120340 [Cochliobolus sativus
ND90Pr]
Length = 392
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+KLHKKE EA T+IETPPM+ VG+VGY++TPRGLRSL TVWA+HLS+EV+RRFY+
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G +SI +LE+IKKY +VVRVLAHTQI K L+QKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-QSITRELERIKKYCTVVRVLAHTQISKTP-LQQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KV++ +G FEK I + +VF+ +EMID+I VTKGKG+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFGHGLFEKPIEITSVFEDNEMIDVIAVTKGKGFNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT +N K+Y++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSVNHKIYRIGKGDDEGNAS-T 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|146417684|ref|XP_001484810.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260]
gi|146390283|gb|EDK38441.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260]
Length = 389
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 256/303 (84%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKRAA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPP+++VGVVGYV+TPRGLRSL TVWA+HLSEE++RRFYK
Sbjct: 61 DRPGSKMHKREIVEAATVVDTPPLVIVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D + I+ +L +I KYASVVRVLAHTQ++K L QKKAH
Sbjct: 121 NWFKSKKKAFTKYSAKYAQDGAQ--IEKELARITKYASVVRVLAHTQVKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG+IA+KV +A FEK + VD+VF+++EMID+I VT+G G+EGV RWG +
Sbjct: 178 LAEIQVNGGSIADKVQWAKEHFEKTVTVDSVFEQNEMIDVIAVTRGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++G G ES+ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGSGADESN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|440635244|gb|ELR05163.1| hypothetical protein GMDG_07204 [Geomyces destructans 20631-21]
Length = 606
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/303 (69%), Positives = 256/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTATMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAVT+IETPPM+VVG+VGY++TPRGLRSL TVWA+HLS++++RRFYK
Sbjct: 61 DRPGAKSHKKEVVEAVTVIETPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDDLKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSEASG-SSITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGG++AEKV++A G FEK + V ++F++DEMID+I VTKGKG+ GV +RWG +
Sbjct: 179 LMEVQINGGSVAEKVEFASGLFEKPVEVASIFEQDEMIDVIAVTKGKGFSGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N KVY++G G E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKVYRVGSGTDEGNAS-T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|297296032|ref|XP_001082799.2| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta]
Length = 403
Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRF K
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFCK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+EIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LVEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|301093682|ref|XP_002997686.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4]
gi|262109935|gb|EEY67987.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4]
Length = 389
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 260/303 (85%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRKFE PRHG LGFLP+KR HRG+V+ FP+DD SK LTAF+G+KAGMTHIVR+V
Sbjct: 1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGFKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HKKE E V+I+ETPPM+V+GVVGY++TPRGLR+L TV+A+HLSEEV+RRFYK
Sbjct: 61 DRPGSKVHKKEIVEPVSIVETPPMVVIGVVGYLETPRGLRTLTTVFAEHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSK+KAFTKY+K+Y+T I+ +L +IKKY VVRVLAHTQ+RK+K L+QKKAH
Sbjct: 121 NWYKSKRKAFTKYAKKYQTAPA--DIENELNRIKKYCQVVRVLAHTQVRKVK-LRQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+E+QVNGG++A+KVD+A FEKQ+PV AVF KDEMID+IGVTKG G EGV+TRWGVTR
Sbjct: 178 LLEVQVNGGSVADKVDFAKSLFEKQVPVTAVFAKDEMIDVIGVTKGHGVEGVITRWGVTR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP+RV FTV RAGQ+GYHHRTE+NKK+Y++G G + + +T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPSRVRFTVPRAGQHGYHHRTEINKKIYRVGAAGDKK-SCMT 296
Query: 321 EFD 323
E D
Sbjct: 297 EQD 299
>gi|148235098|ref|NP_001091345.1| uncharacterized protein LOC100037184 [Xenopus laevis]
gi|125858902|gb|AAI29593.1| LOC100037184 protein [Xenopus laevis]
Length = 405
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/295 (75%), Positives = 257/295 (87%), Gaps = 4/295 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR RHRGKVK+FP+DD SKPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRTRRHRGKVKSFPRDDASKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSK-LHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
+PGSK LH KE EAVTIIETPPM+VVGVVGYV TPRGLR+L TVWAQ+LSEE +RRFY
Sbjct: 61 IRPGSKALHNKEIVEAVTIIETPPMVVVGVVGYVATPRGLRALTTVWAQNLSEECKRRFY 120
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLK---Q 196
K W KSKKKAFTKY+K+YETD GKK I +LE+IKKY SVVRV+AHTQ+ KM+G + Q
Sbjct: 121 KTWYKSKKKAFTKYAKKYETDAGKKEIDHELERIKKYCSVVRVIAHTQMSKMRGARADRQ 180
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
+KAH+ME+QVNGG++A+KVD+A G FE+Q+PV +VF ++E +DII VTKGKG+EGV RW
Sbjct: 181 RKAHIMEVQVNGGSVADKVDFARGLFEQQVPVKSVFGQNENVDIIAVTKGKGFEGVTFRW 240
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
GV +L RKTHRGLRKVACIGAWHPARV FTV RAGQNGYHHRTE+NKK+Y++G G
Sbjct: 241 GVKKLQRKTHRGLRKVACIGAWHPARVGFTVPRAGQNGYHHRTELNKKIYRIGDG 295
>gi|145232153|ref|XP_001399531.1| 60S ribosomal protein L3 [Aspergillus niger CBS 513.88]
gi|134056442|emb|CAL00609.1| unnamed protein product [Aspergillus niger]
Length = 392
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 256/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EA T+IETPP++ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKMHKKEVVEAATVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVRVLAHTQ+RK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQVRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+A FEK I +D++F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP V +TVARAGQ GYHHRT N KV+++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPNHVQWTVARAGQMGYHHRTSCNHKVFRVGKGSDEGNAS-T 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|344296357|ref|XP_003419875.1| PREDICTED: 60S ribosomal protein L3-like [Loxodonta africana]
Length = 566
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/290 (71%), Positives = 254/290 (87%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V+
Sbjct: 165 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDTSKPVHLTAFLGYKAGMTHIVREVD 224
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYKN
Sbjct: 225 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 284
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY K+++ D+GKK ++ +K+Y V+RV+AHTQ+R + L+QKKAHL
Sbjct: 285 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFSSMKRYCQVIRVIAHTQMRLLP-LRQKKAHL 343
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEKVD+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 344 MEIQVNGGTVAEKVDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 403
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 404 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQG 453
>gi|315051194|ref|XP_003174971.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893]
gi|311340286|gb|EFQ99488.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893]
Length = 412
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/307 (68%), Positives = 257/307 (83%), Gaps = 5/307 (1%)
Query: 17 QRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI 76
QR +MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT I
Sbjct: 19 QRVKMSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTI 78
Query: 77 VRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRR 136
VRD+E+PG+K+H+KE EAVTI+ETPPM+ VG+VGY++TPRGLRSL TVWA+HLS+EV+R
Sbjct: 79 VRDLERPGAKMHRKEIVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWAEHLSDEVKR 138
Query: 137 RFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQ 196
RFYKNW KSKKKAFT+Y+K T S +LE+IK Y +VVR+LAHTQIRK LKQ
Sbjct: 139 RFYKNWYKSKKKAFTRYAK---THADAASTTRELERIKNYCTVVRLLAHTQIRKTP-LKQ 194
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
KKAHLME+QVNGG++AEKV++A+G FEK I VD+VF+KDE++D+I VTKG G+ GV +RW
Sbjct: 195 KKAHLMEVQVNGGSVAEKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRW 254
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
G +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y++GK E +
Sbjct: 255 GTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEGN 314
Query: 317 TGITEFD 323
T+FD
Sbjct: 315 AS-TDFD 320
>gi|398411379|ref|XP_003857029.1| 60S ribosomal protein L3 [Zymoseptoria tritici IPO323]
gi|339476914|gb|EGP92005.1| hypothetical protein MYCGRDRAFT_102848 [Zymoseptoria tritici
IPO323]
Length = 392
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 257/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRAARHRGKVK+FPKDDP + LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKQKTHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+KLHKKE EA T+IETPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEAATVIETPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ +EG KSI LE+IKKY +VVRVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKH-AEEGGKSITRDLERIKKYCTVVRVLAHTQISKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++ G FEK + +D++F+++EMID I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFGQGLFEKPVEIDSIFEQNEMIDCIAVTKGHGFSGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V ++VARAGQ+GYHHRT +N KVY++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWSVARAGQDGYHHRTSVNHKVYRIGKGNDEGN-ATT 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|71019525|ref|XP_759993.1| hypothetical protein UM03846.1 [Ustilago maydis 521]
gi|46099519|gb|EAK84752.1| hypothetical protein UM03846.1 [Ustilago maydis 521]
Length = 474
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/315 (67%), Positives = 257/315 (81%), Gaps = 20/315 (6%)
Query: 26 FEHPRHGSLGFLPRKRAARHRGKVKA-----------------FPKDDPSKPCRLTAFLG 68
FEHPRHGSLGFLPRKRAARHRGKVKA FPKDDP KP LTA +G
Sbjct: 72 FEHPRHGSLGFLPRKRAARHRGKVKASLTLSSIYRASMYQSHSFPKDDPKKPVHLTAMIG 131
Query: 69 YKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQ 128
YKAGMTHIVRD+++PGSK+HKKE EAVT+IETPPM+ VGVVGYV+TPRGLRSL TVWA+
Sbjct: 132 YKAGMTHIVRDLDRPGSKMHKKEIVEAVTVIETPPMVAVGVVGYVETPRGLRSLTTVWAE 191
Query: 129 HLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQI 188
HLS+EV+RRFYKNW +SKKKAFT+Y+K++ + G SI +LE+IKKY +VVRVLAHTQ+
Sbjct: 192 HLSDEVKRRFYKNWYRSKKKAFTRYAKKHSENNGA-SISRELERIKKYCTVVRVLAHTQV 250
Query: 189 RKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKG 248
RK GLKQKKAHLME+Q+NGG++AEKVD+A FEK V +VF+++E+ID+I VTKG G
Sbjct: 251 RKT-GLKQKKAHLMEVQINGGSVAEKVDFAKEHFEKTFDVKSVFEQNEIIDVIAVTKGHG 309
Query: 249 YEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
YEGV RWG +LPRKTHRGLRK+ACIGAWHPA V FTVAR+GQ+GYHHRTE+ KK+Y++
Sbjct: 310 YEGVTARWGTKKLPRKTHRGLRKIACIGAWHPANVMFTVARSGQDGYHHRTEIGKKIYRI 369
Query: 309 GKGGQESHTGITEFD 323
G++ +G T+FD
Sbjct: 370 S-NGEDKTSGSTDFD 383
>gi|260946767|ref|XP_002617681.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720]
gi|238849535|gb|EEQ38999.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720]
Length = 388
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 254/303 (83%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKR+A HRG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEQPRHGSLGFLPRKRSASHRGQVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPPM++VGVVGYV+TPRGLRSL TVWA+HLSEEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVIVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y + + I +L +I KYASVVRVL HTQ++K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYA--QNGEEINRELARITKYASVVRVLVHTQVKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I +KV++A FEK + VD+VF+KDEMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSIEDKVNWAKEHFEKTVSVDSVFEKDEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++G G E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGSGADEAN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|225706512|gb|ACO09102.1| 60S ribosomal protein L3 [Osmerus mordax]
Length = 403
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/291 (70%), Positives = 253/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGYV+TPRGLRS T++A+H+S+E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVETPRGLRSFKTIFAEHVSDECKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ DEGKK ++ +KKY VVR+LAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRILAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGG+IA+KVD+A E+ +P+ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSIADKVDWAREKLEQAVPIANVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|255946257|ref|XP_002563896.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588631|emb|CAP86747.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 392
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 255/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTASMGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAVT+IETPP++ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K + G SI +LE+I+KY +VVRVLAHTQIR+ +KQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKSHAESSG-ASITRELERIQKYCTVVRVLAHTQIRQTP-IKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+A FEK I +D++F+KDEMID+I VTKG G+ GV +RWG T+
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKTIDIDSIFEKDEMIDVIAVTKGHGFSGVTSRWGTTK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP V +TVARAGQ+GYHHRT N KV+++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSCNHKVFRIGKGTDEGNAS-T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|340522512|gb|EGR52745.1| hypothetical protein TRIREDRAFT_73765 [Trichoderma reesei QM6a]
Length = 391
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 255/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAV+II+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVR+LAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSDNSG-ASINRELERIKKYCTVVRILAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+A FEK + VD +F++DE+ID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFAKDLFEKPVSVDTIFEQDEVIDVIAVTKGHGFSGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQEGYHHRTSVNHKVYRIGKGDAED-SAST 297
Query: 321 EFD 323
+ D
Sbjct: 298 DVD 300
>gi|327304004|ref|XP_003236694.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
gi|326462036|gb|EGD87489.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
Length = 459
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/307 (68%), Positives = 256/307 (83%), Gaps = 5/307 (1%)
Query: 17 QRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI 76
QR +MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT I
Sbjct: 66 QRVKMSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTI 125
Query: 77 VRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRR 136
VRD+E+PG+K+H+KE EAVTI+ETPPM+ VG+VGY++TPRGLRSL TVWA HLS+EV+R
Sbjct: 126 VRDLERPGAKMHRKEIVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKR 185
Query: 137 RFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQ 196
RFYKNW KSKKKAFT+Y+K T + +LE+IK Y +VVR+LAHTQIRK LKQ
Sbjct: 186 RFYKNWYKSKKKAFTRYAK---THADASTTTRELERIKNYCTVVRLLAHTQIRKTP-LKQ 241
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
KKAHLMEIQVNGG+IA+KV++A+G FEK I VD+VF+KDE++D+I VTKG G+ GV +RW
Sbjct: 242 KKAHLMEIQVNGGSIADKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRW 301
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
G +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y++GK E +
Sbjct: 302 GTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEGN 361
Query: 317 TGITEFD 323
T+FD
Sbjct: 362 AS-TDFD 367
>gi|27807287|ref|NP_777140.1| 60S ribosomal protein L3 [Bos taurus]
gi|730564|sp|P39872.2|RL3_BOVIN RecName: Full=60S ribosomal protein L3
gi|187609300|pdb|2ZKR|BB Chain b, Structure Of A Mammalian Ribosomal 60s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|450499|emb|CAA82654.1| ribosomal protein L3 [Bos taurus]
gi|59858389|gb|AAX09029.1| ribosomal protein L3 [Bos taurus]
gi|74267942|gb|AAI02254.1| Ribosomal protein L3 [Bos taurus]
gi|296486985|tpg|DAA29098.1| TPA: 60S ribosomal protein L3 [Bos taurus]
gi|1092507|prf||2024221A ribosomal protein L3
Length = 403
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 254/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM++VG+VGYV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+QVNGGT+AEK+D+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|7159574|emb|CAB76199.1| ribosomal protein L3 [Bos taurus]
Length = 403
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 254/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM++VG+VGYV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+QVNGGT+AEK+D+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|348687785|gb|EGZ27599.1| hypothetical protein PHYSODRAFT_284116 [Phytophthora sojae]
Length = 389
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/303 (69%), Positives = 259/303 (85%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRKFE PRHG LGFLP+KR HRG+V+ FP+DD SK LTAF+GYKAGMTHI+R+V
Sbjct: 1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGYKAGMTHIMREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HKKE E V+I+ETPPM+V+GVVGY++TPRGLR+L TV+A+HLSEEV+RRFYK
Sbjct: 61 DRPGSKVHKKEIVEPVSIVETPPMVVIGVVGYLETPRGLRTLTTVFAEHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSK+KAFTKY+K+Y+T I+ +L +IKKY VVRVLAHTQ+RK+K L+QKKAH
Sbjct: 121 NWYKSKRKAFTKYAKKYQTAPA--DIENELNRIKKYCQVVRVLAHTQVRKVK-LRQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+E+QVNGG++ +KVD+A FEKQ+PV AVF KDEMID+IGVTKG G EGV+TRWGVTR
Sbjct: 178 LLEVQVNGGSVGDKVDFAKSLFEKQVPVTAVFAKDEMIDVIGVTKGHGIEGVITRWGVTR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP+RV FTV RAGQ+GYHHRTE+NKK+Y++G G + + +T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPSRVRFTVPRAGQHGYHHRTEINKKIYRIGAAGDKK-SCMT 296
Query: 321 EFD 323
E D
Sbjct: 297 EQD 299
>gi|406864005|gb|EKD17051.1| 60S ribosomal protein L3 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 392
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 256/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKTHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFTKY+K++ G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYRSKKKAFTKYAKKHSESSG-SSITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KV++ +G FEK + + ++F++DEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFGHGLFEKPVEISSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP V +TVARAGQ+GYHHRT N KVY++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPCHVQWTVARAGQDGYHHRTSCNHKVYRIGKGDDEGN-ATT 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|432867474|ref|XP_004071207.1| PREDICTED: 60S ribosomal protein L3-like [Oryzias latipes]
Length = 403
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 252/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGK K+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKCKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGV GYV TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVTGYVSTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +EGKK ++ +KKY V+RV+AHTQ+R + LKQKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LKQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGGTI++KVD+A E+ +PV+ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGTISDKVDWAREKLEQAVPVNTVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|426225796|ref|XP_004007048.1| PREDICTED: 60S ribosomal protein L3 [Ovis aries]
Length = 403
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 254/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM++VG+VGYV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDVDGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+QVNGGT+AEK+D+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|348510237|ref|XP_003442652.1| PREDICTED: 60S ribosomal protein L3 [Oreochromis niloticus]
Length = 403
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/291 (71%), Positives = 251/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGYV TPRGLRS TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVNTPRGLRSFKTVFAEHMSDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +EGKK ++ +KKY V+RV+ HTQ+R M L+QKKAH
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFAAMKKYCQVIRVICHTQMR-MLPLRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+QVNGGTI++KVD+A E+ + V+ VF +DEMIDIIGVTKG GY+GV +RW +
Sbjct: 180 LMEVQVNGGTISDKVDWAREKLEQAVLVNNVFTQDEMIDIIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|389638328|ref|XP_003716797.1| 60S ribosomal protein L3 [Magnaporthe oryzae 70-15]
gi|351642616|gb|EHA50478.1| 60S ribosomal protein L3 [Magnaporthe oryzae 70-15]
gi|440474629|gb|ELQ43359.1| 60S ribosomal protein L3 [Magnaporthe oryzae Y34]
gi|440480504|gb|ELQ61164.1| 60S ribosomal protein L3 [Magnaporthe oryzae P131]
Length = 392
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 257/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAV+II+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ ++ S+ +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKH-SESKASSVTRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KV++ +G FEK + +D +F+++EMIDII VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFGHGLFEKPVSIDTIFEQNEMIDIIAVTKGHGFNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDAEDNAA-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EID 300
>gi|242810586|ref|XP_002485611.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
gi|218716236|gb|EED15658.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
Length = 398
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/303 (68%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
+SHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 7 VSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTIVRDL 66
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAVT+IETPP++ VGVVGY++TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 67 DRPGAKMHKKEVVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 126
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT+Y+K++ T+ S+ +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 127 NWYKSKKKAFTRYAKKH-TESSAASVTRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 184
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KVD+A+G FEK I +D +F+++E+ID+I VTKG G+ GV +RWG +
Sbjct: 185 LMEIQVNGGSVADKVDFAHGLFEKTIDIDTIFEQNEVIDVIAVTKGHGFNGVTSRWGTKK 244
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP V +TVARAGQ GYHHRT +N K+Y++GKG E + T
Sbjct: 245 LPRKTHKGLRKVACIGAWHPNHVQWTVARAGQMGYHHRTSVNHKIYRIGKGSDEGNAS-T 303
Query: 321 EFD 323
E+D
Sbjct: 304 EYD 306
>gi|341038755|gb|EGS23747.1| 60S ribosomal protein L3-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 392
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 254/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLPRKRAARHRG+VK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGRVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAVTII+ PPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVTIIDCPPMVVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+Y + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKYAENNG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG++A+KV++ FEK + +D +F+KDEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVEFGRSLFEKPVTIDTIFEKDEMIDVIAVTKGHGFVGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKG E++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDDEANAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 ETD 300
>gi|452846836|gb|EME48768.1| hypothetical protein DOTSEDRAFT_67718 [Dothistroma septosporum
NZE10]
Length = 392
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 258/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDD + LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDQKQKPHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+KLHKKE EAVT+IETPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEAVTVIETPPMVVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ +EG K+I LE+IKKY +VVRVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKH-AEEGGKNITRDLERIKKYCTVVRVLAHTQIHKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++ +G FEK + +D+VF++DEMID I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFGHGLFEKPVEIDSVFEQDEMIDCIAVTKGHGFQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRVGKGSDERN-ATT 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|75076108|sp|Q4R5Q0.3|RL3_MACFA RecName: Full=60S ribosomal protein L3
gi|67970465|dbj|BAE01575.1| unnamed protein product [Macaca fascicularis]
Length = 403
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 255/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE AVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|296237103|ref|XP_002763611.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Callithrix
jacchus]
Length = 403
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 255/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLP+KR +RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPQKRNSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT++EK+D+A E+Q+PV+ VF +DEMID+IGV+K KGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVSEKLDWARKRLEQQVPVNQVFGQDEMIDVIGVSKRKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|414588491|tpg|DAA39062.1| TPA: hypothetical protein ZEAMMB73_842297 [Zea mays]
Length = 347
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/239 (87%), Positives = 227/239 (94%)
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
++LHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSEEVRRRFYKNWCK
Sbjct: 23 TELHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWCK 82
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
SKKKAFTKY+ +YE D GKK IQ QLEK+KKYASV+RV+AHTQIRKMKGLKQKKAHLMEI
Sbjct: 83 SKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAHLMEI 142
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
QVNGGTIA+KVDY Y FFEK++PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 143 QVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 202
Query: 265 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
THRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H TEFD
Sbjct: 203 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDASTEFD 261
>gi|361126129|gb|EHK98144.1| putative 60S ribosomal protein L3 [Glarea lozoyensis 74030]
Length = 391
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 254/303 (83%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA LGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTATLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGAKSHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+Y + GK I + +I KY SVVRVLAHTQIR+ LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKYAS--GKNEIDREFARIAKYCSVVRVLAHTQIRQTP-LKQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++ +KV +A G FEK + + ++F++DEMID+I VTKG G+ GV +RWG +
Sbjct: 178 LMEIQVNGGSVEDKVSFAKGLFEKPVEISSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N K+Y++GKG E + T
Sbjct: 238 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKIYRVGKGTDEGN-ATT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|61654614|gb|AAX48833.1| L3 [Suberites domuncula]
Length = 399
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/303 (66%), Positives = 254/303 (83%), Gaps = 1/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSL FLPRKR RHRGKVK FPKDD +KPC LTAF+GYKAGMTHI+R++
Sbjct: 1 MSHRKFSAPRHGSLAFLPRKRCKRHRGKVKTFPKDDAAKPCHLTAFMGYKAGMTHILREM 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PGSK HK E EAVTIIETPP+M+VGVVGY++TPRGLR + T++AQHL++E RRRFYK
Sbjct: 61 NRPGSKSHKHEVVEAVTIIETPPIMIVGVVGYIETPRGLRPIKTIFAQHLNDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAF+K S +++ + G+KSIQA +K+KKY V+RV+ HTQ++ + G++QKKAH
Sbjct: 121 NWSNSKKKAFSKASGRWKDEAGQKSIQADFDKLKKYCKVIRVICHTQVQLLNGVRQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGG+I++KVD+A EK IP+ +F KDEMID+IGVTKGKG++GV +RW +
Sbjct: 181 IMEIQVNGGSISDKVDWAKEHMEKAIPIKDIFNKDEMIDVIGVTKGKGFKGVTSRWHCKK 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+RVSF+VARAGQ GYHHRTE+NKK+Y++G +++ T
Sbjct: 241 LPRKTHKGLRKVACIGAWHPSRVSFSVARAGQKGYHHRTEINKKIYRIG-DKEDNANAAT 299
Query: 321 EFD 323
EFD
Sbjct: 300 EFD 302
>gi|189204215|ref|XP_001938443.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985542|gb|EDU51030.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 392
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 254/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+KLHKKE EA T+IETPPM+ VG+VGY++TPRGLRSL TVWA+HLS+EV+RRFY+
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ G +SI +LE++KKY +V+RVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESNG-QSITRELERMKKYCTVIRVLAHTQISKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG+IA+KV++ +G FEK I + ++F+ +EMID+I VTKG GY GV +RWG +
Sbjct: 179 LMEIQINGGSIADKVEHGHGLFEKPIEISSIFEANEMIDVIAVTKGHGYNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N K+Y++GK E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQMGYHHRTSVNHKIYRIGKADDEGNAS-T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|62083393|gb|AAX62421.1| ribosomal protein L3 [Lysiphlebus testaceipes]
gi|62083395|gb|AAX62422.1| ribosomal protein L3 variant 1 [Lysiphlebus testaceipes]
Length = 412
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/291 (70%), Positives = 253/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPMM+VG VGY++TP GLR+L TVWA+HLSE+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILETPPMMIVGCVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK+++ D G+KSI+ L+KIKKY VVRV+AHTQ++ ++ +QKKA+
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIEKDLKKIKKYCKVVRVIAHTQMKLLR-QRQKKAN 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+IA+KV++A EK IPV VF +DEMID+IGVTKGKG +GV +RW +
Sbjct: 180 IMEIQLNGGSIADKVEWAREHLEKPIPVSNVFAQDEMIDVIGVTKGKGTKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|171689180|ref|XP_001909530.1| hypothetical protein [Podospora anserina S mat+]
gi|170944552|emb|CAP70663.1| unnamed protein product [Podospora anserina S mat+]
Length = 392
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 255/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDM 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K +KKE EAVTII+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKANKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG++A+KV++ +G FEK + +D +F+KDEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVEFGHGLFEKPVSIDTIFEKDEMIDVIAVTKGHGFSGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADDNAA-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EID 300
>gi|336263974|ref|XP_003346766.1| 60S ribosomal protein L3 [Sordaria macrospora k-hell]
gi|380091473|emb|CCC10969.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 392
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 255/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDM 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAVTII+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K++ + G +I +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYVKKHSDNNG-AAITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG+IA+KV++ +G FEK + +D++F+KDE+ID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSIADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK G E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKAGAED-SAAT 297
Query: 321 EFD 323
E D
Sbjct: 298 EVD 300
>gi|154426164|gb|AAI51556.1| Ribosomal protein L3 [Bos taurus]
Length = 403
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/291 (70%), Positives = 253/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIV +V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVMEV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM++VG+VGYV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+QVNGGT+AEK+D+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|449549702|gb|EMD40667.1| hypothetical protein CERSUDRAFT_80320 [Ceriporiopsis subvermispora
B]
Length = 388
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/303 (71%), Positives = 264/303 (87%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVKAFPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAVMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT+IETPPM+VVGVVGYV+TPRGLR+L TVWA HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ D G KSI +LE+I+KY +VVRVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHAED-GGKSIARELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++A+G FEK V +VF++DE+ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAHGLFEKPAEVGSVFEQDEVIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G G E++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRVGSGSDEANAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EHD 300
>gi|322705242|gb|EFY96829.1| 60S ribosomal protein L3 [Metarhizium anisopliae ARSEF 23]
Length = 391
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 252/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K +KKE EAVT+++TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKANKKEVVEAVTVVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG++A+KV + FEK + +D +F++DEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVSFGQDLFEKPVSIDTIFEQDEMIDVIAVTKGHGFNGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDAED-SAST 297
Query: 321 EFD 323
E D
Sbjct: 298 EID 300
>gi|330907574|ref|XP_003295853.1| 60S ribosomal protein L3 [Pyrenophora teres f. teres 0-1]
gi|311332456|gb|EFQ96051.1| hypothetical protein PTT_03505 [Pyrenophora teres f. teres 0-1]
Length = 392
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 254/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+KLHKKE EA T+IETPPM+ VG+VGY++TPRGLRSL TVWA+HLS+EV+RRFY+
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G +SI +LE++KKY +V+RVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSEENG-QSITRELERMKKYCTVIRVLAHTQISKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG+IA+KV + +G FEK I + ++F+ +EMID+I VTKG GY GV +RWG +
Sbjct: 179 LMEIQINGGSIADKVAHGHGLFEKPIEISSIFEANEMIDVIAVTKGHGYNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N K+Y++GK E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQMGYHHRTSVNHKIYRIGKADDEGNAS-T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|291223744|ref|XP_002731867.1| PREDICTED: ribosomal protein L3-like [Saccoglossus kowalevskii]
Length = 404
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/291 (71%), Positives = 247/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVKAFPKDD SKPC LTAF+GYKAGMTHIVR V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKAFPKDDQSKPCHLTAFVGYKAGMTHIVRQV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTIIETPP+MVVGVVGY+ TPRG R+L T+WA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTIIETPPLMVVGVVGYIDTPRGQRTLKTIWAEHLNEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW ++KKKAFTK SK++ D GK++I+ +KKY V+R+LAHTQ+R M +QKKAH
Sbjct: 121 NWYRAKKKAFTKASKKWGDDGGKQAIEKDFNAMKKYCKVIRILAHTQMRLM-NQRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
++EIQ+NGGTIAEKVD+A E QIPV VF +DEMID+IGVTKGKG++GV +RWG +
Sbjct: 180 IIEIQINGGTIAEKVDWAREKLESQIPVTQVFVQDEMIDVIGVTKGKGFKGVTSRWGTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV + VARAGQ GYHHRTE+NKKVY++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYGVARAGQKGYHHRTELNKKVYRIGAG 290
>gi|322695627|gb|EFY87432.1| 60S ribosomal protein L3 [Metarhizium acridum CQMa 102]
Length = 391
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 252/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K +KKE EAVT+++TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKANKKEVVEAVTVVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG++A+KV + FEK + +D +F++DEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVSFGQDLFEKPVSIDTIFEQDEMIDVIAVTKGHGFNGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDAED-SAST 297
Query: 321 EFD 323
E D
Sbjct: 298 EVD 300
>gi|310794485|gb|EFQ29946.1| ribosomal protein L3 [Glomerella graminicola M1.001]
Length = 391
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 253/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K +KKE EAV+II+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+E+RRRFYK
Sbjct: 61 DRPGAKANKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+KQ+ G SI +LE+IKKY +VVRVLAHTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYAKQHSEASG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LTQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++ EKVD+ YG FEK + +D++F+++EMID+I VT G GY GV +RWG +
Sbjct: 179 LMEIQVNGGSVPEKVDFGYGLFEKPVTIDSIFEQNEMIDVIAVTTGHGYNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADDNAS-T 297
Query: 321 EFD 323
+ D
Sbjct: 298 DVD 300
>gi|164424622|ref|XP_963317.2| 60S ribosomal protein L3 [Neurospora crassa OR74A]
gi|30580497|sp|P59671.1|RL3_NEUCR RecName: Full=60S ribosomal protein L3
gi|28881190|emb|CAD70371.1| probable 60s ribosomal protein l3 (rpl3) [Neurospora crassa]
gi|157070591|gb|EAA34081.2| 60S ribosomal protein L3 [Neurospora crassa OR74A]
gi|336468587|gb|EGO56750.1| hypothetical protein NEUTE1DRAFT_95379 [Neurospora tetrasperma FGSC
2508]
gi|350289142|gb|EGZ70367.1| putative 60s ribosomal protein l3 [Neurospora tetrasperma FGSC
2509]
Length = 392
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/303 (68%), Positives = 255/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAVTII+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K++ + G +I +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYVKKHSDNNG-AAITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG++A+KV++ +G FEK + +D++F+KDE+ID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKGDAED-SAAT 297
Query: 321 EFD 323
E D
Sbjct: 298 EVD 300
>gi|403418102|emb|CCM04802.1| predicted protein [Fibroporia radiculosa]
Length = 939
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 263/303 (86%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVKAFPKDD KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDSKKPVHLTAIMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVTIIETPP++VVGVVGYV+TPRGLR+L TVWA HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTIIETPPLVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ D G KSI +LE+I+KY +VVRVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHAED-GGKSIARELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++A+G FEK + V VF++DE++D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAHGLFEKPVEVGTVFEQDEVVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G G E++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGDDEANAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EHD 300
>gi|358386834|gb|EHK24429.1| hypothetical protein TRIVIDRAFT_79029 [Trichoderma virens Gv29-8]
Length = 391
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/303 (68%), Positives = 255/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K +KKE EAV+II+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKANKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVR+LAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSDNSG-ASINRELERIKKYCTVVRILAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++AEKVD+ FEK + +D++F++DE+ID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQVNGGSVAEKVDFGKDLFEKPVSIDSIFEQDEVIDVIAVTKGHGFSGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQEGYHHRTSVNHKVYRIGKGDADDNAS-T 297
Query: 321 EFD 323
+ D
Sbjct: 298 DID 300
>gi|330805639|ref|XP_003290787.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
gi|325079065|gb|EGC32684.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
Length = 399
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/308 (68%), Positives = 257/308 (83%), Gaps = 6/308 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHG+LGF PRKRA+RH+GKVK+FPKDD ++ LTAF+GYKAGMTHIVRD+
Sbjct: 1 MSHRKFEAPRHGNLGFRPRKRASRHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSK+HKKE EAVTI+E PPM +VG+VGY++T +GL++ TVWAQHLS+ RRR YK
Sbjct: 61 EKPGSKMHKKEVVEAVTILECPPMYIVGLVGYIETAQGLKTYKTVWAQHLSDNFRRRLYK 120
Query: 141 NWCKSK-KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
NW KSK KKAFTKY KQYET+EGKK+I+A L+ IKK SVVRV+AHTQI K++ L QKKA
Sbjct: 121 NWYKSKSKKAFTKYVKQYETEEGKKAIEASLQAIKKRCSVVRVIAHTQINKLR-LTQKKA 179
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H++EIQVNGG+I EKV++A FEK + V VF ++EMID+IGVTKGKG+ GV+ RWGV
Sbjct: 180 HVLEIQVNGGSIVEKVNFAVANFEKTVSVSGVFSENEMIDVIGVTKGKGFNGVIKRWGVR 239
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG----GQES 315
+LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKK+Y++G+ G++
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPVEGKQI 299
Query: 316 HTGITEFD 323
TG TEFD
Sbjct: 300 STGKTEFD 307
>gi|337580|gb|AAA60291.1| ribosomal protein L3, partial [Homo sapiens]
Length = 398
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/286 (71%), Positives = 252/286 (88%), Gaps = 1/286 (0%)
Query: 26 FEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 85
F PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGS
Sbjct: 1 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 60
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKS 145
K++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYKNW KS
Sbjct: 61 KVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKS 120
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
KKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHLMEIQ
Sbjct: 121 KKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQ 179
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
VNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKT
Sbjct: 180 VNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKT 239
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
HRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 HRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 285
>gi|66802278|ref|XP_629921.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4]
gi|464637|sp|P34113.2|RL3_DICDI RecName: Full=60S ribosomal protein L3
gi|167816|gb|AAA99508.1| ribosomal protein [Dictyostelium discoideum]
gi|60463269|gb|EAL61461.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4]
Length = 398
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/308 (69%), Positives = 257/308 (83%), Gaps = 6/308 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHG+LGF PRKRAARH+GKVK+FPKDD ++ LTAF+GYKAGMTH+VRD+
Sbjct: 1 MSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSK+HKKE EAVTIIE PPM +VG+VGYV+T +GL++ TVWAQHLS+ RRR YK
Sbjct: 61 EKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYK 120
Query: 141 NWCKSK-KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
NW KSK KKAFTKY KQYET+EGKKSI+A L+ IKK SVVRV+AHTQ+ K+K L QKKA
Sbjct: 121 NWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLK-LTQKKA 179
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H++EIQVNGG+I EKV++A FEK + V VF ++E+ID+IGVTKGKG+ GV+ RWGV
Sbjct: 180 HVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVR 239
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG----GQES 315
+LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKK+Y++G+ G++
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQI 299
Query: 316 HTGITEFD 323
TG TEFD
Sbjct: 300 STGKTEFD 307
>gi|340368475|ref|XP_003382777.1| PREDICTED: 60S ribosomal protein L3-like [Amphimedon queenslandica]
Length = 402
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 200/298 (67%), Positives = 253/298 (84%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKPC LTA++GYKAGMTH VR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPCHLTAYMGYKAGMTHTVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PGSK HK E EAVTIIETPPM+ VGVVGY++TPRGLR L T++AQH++E+ +RRFYK
Sbjct: 61 NRPGSKSHKNEVVEAVTIIETPPMVCVGVVGYIETPRGLRQLKTIFAQHITEDCKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKK A+TK +K++ + GK++I+ EK+KKY ++RVL HTQ+ K+K LKQKK+H
Sbjct: 121 NWYRSKKTAYTKAAKRWADEAGKEAIKQDFEKMKKYCKIIRVLCHTQLSKIKSLKQKKSH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIA+KV++A EK+IPV VF+++E++D+IGVTKGKG++GV +RW +
Sbjct: 181 LMEIQVNGGTIADKVEWAKEHLEKEIPVSDVFEQNEVLDVIGVTKGKGFKGVTSRWHTKK 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
LPRKTH+GLRKVACIGAWHP+RV ++VARAGQ GYHHRTEMNKK+Y++G +E++ G
Sbjct: 241 LPRKTHKGLRKVACIGAWHPSRVQYSVARAGQKGYHHRTEMNKKIYRIGSATEENNGG 298
>gi|392568120|gb|EIW61294.1| 60S ribosomal protein L3 [Trametes versicolor FP-101664 SS1]
Length = 388
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 264/303 (87%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVKAFPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT++ETPPM+VVGVVGYV+TPRGLR+L TVWA HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVVETPPMIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ D G KSI +LE+I+KY +VVRVLAHTQIRK GL QK+AH
Sbjct: 121 NWYRSKKKAFTRYAKKHAED-GGKSIARELERIRKYCTVVRVLAHTQIRKT-GLTQKRAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++A G FEK + V +VF++DE+ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFANGLFEKPVEVSSVFEQDEVIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G G +++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGEDDANAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EHD 300
>gi|346319212|gb|EGX88814.1| 60S ribosomal protein L3 [Cordyceps militaris CM01]
Length = 475
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/304 (68%), Positives = 254/304 (83%), Gaps = 3/304 (0%)
Query: 20 RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD 79
+MSHRK E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD
Sbjct: 83 KMSHRKHEEPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRD 142
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
++PG+K +KKE EAVTI++TPPM+VVG+VGY++TPRGLRSLNTVWA+HLS+E++RRFY
Sbjct: 143 SDRPGAKSNKKEVVEAVTIVDTPPMIVVGLVGYIETPRGLRSLNTVWAEHLSDELKRRFY 202
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
KNW KSKKKAFTKY+K++ G SI +LE++KKY +V+R+LAHTQIRK LKQKKA
Sbjct: 203 KNWYKSKKKAFTKYAKKHSEASG-ASIARELERMKKYCTVIRILAHTQIRKTP-LKQKKA 260
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
HLMEIQVNGG+IA+KVD+ FEK + +D++F++DEMID+I VTKG G+ GV RWG
Sbjct: 261 HLMEIQVNGGSIADKVDFGKNLFEKPVSIDSIFEQDEMIDVIAVTKGHGFTGVTKRWGTK 320
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
+LPRKTH+GLRKVACIGAWHP V +TVARAGQ+GYHHRT +N KVY++GK G E +
Sbjct: 321 KLPRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSVNHKVYRIGKAGAED-SAS 379
Query: 320 TEFD 323
TE D
Sbjct: 380 TEMD 383
>gi|402076640|gb|EJT72063.1| 60S ribosomal protein L3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 392
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/303 (67%), Positives = 256/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K HKKE EAV+II+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGAKSHKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ +G SI ++E+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESKG-ASITREIERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG++A+KV++ +G FEK + +D +F+++E+ID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQINGGSVADKVEFGHGLFEKPVSIDTIFEQNEVIDVIAVTKGHGFNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GK E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKADAED-SAAT 297
Query: 321 EFD 323
E D
Sbjct: 298 ELD 300
>gi|380012028|ref|XP_003690092.1| PREDICTED: 60S ribosomal protein L3-like [Apis florea]
Length = 415
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 250/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGY++TP GLR+L TVWA+HLSE+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK+++ D G+KSI+ +KI KY VVR++AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIENDFKKIVKYCKVVRIIAHTQMKLLR-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTI +KV +A EK +PV VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIEQKVQWAREHLEKPVPVSNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|345565030|gb|EGX47986.1| hypothetical protein AOL_s00081g313 [Arthrobotrys oligospora ATCC
24927]
Length = 390
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 254/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRG+ KAFPKD+ KP LTA LGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGRCKAFPKDNAKKPVHLTAALGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAVT+IETPPM+ VGVVGY++TPRGLRSL TVWA HLS+E+RRRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTVIETPPMIAVGVVGYIETPRGLRSLTTVWAAHLSDEIRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ G +I+ LE+IKKY +VVR++AHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSETNG-SAIERDLERIKKYCTVVRLIAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+IAEKVD+A FEK I + ++F+KDE+IDIIGVTKG G+ GV +RWG +
Sbjct: 179 MMEIQINGGSIAEKVDFAKNLFEKPIEIPSIFEKDEVIDIIGVTKGHGFNGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N K+Y++G G ++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQYGYHHRTSVNHKIYRVGLGSDPNNAS-T 297
Query: 321 EFD 323
E+D
Sbjct: 298 EYD 300
>gi|359745329|gb|AEV57601.1| 60S ribosomal protein L3 [Muraenesox cinereus]
Length = 403
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/291 (69%), Positives = 252/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FP+DD +KP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPRDDATKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGYV+TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ DEGKK ++ +KKY VVR++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFAAMKKYCQVVRIIAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGG+IA+KVD+A E+ +P+ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSIADKVDWAREKLEQAVPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|66566113|ref|XP_624821.1| PREDICTED: 60S ribosomal protein L3 [Apis mellifera]
Length = 415
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 250/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGY++TP GLR+L TVWA+HLSE+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK+++ D G+KSI+ +KI KY VVR++AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIENDFKKIIKYCKVVRIIAHTQMKLLR-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTI +KV +A EK +PV VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIEQKVQWAREHLEKPVPVSNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|392875086|gb|AFM86375.1| 60S ribosomal protein L3 [Callorhinchus milii]
gi|392876078|gb|AFM86871.1| 60S ribosomal protein L3 [Callorhinchus milii]
gi|392881180|gb|AFM89422.1| 60S ribosomal protein L3 [Callorhinchus milii]
Length = 403
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 252/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT+IETPPM++VG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +EGKK ++ +KKY V+RVLAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTIAEK+D+A E+Q+ V+ VF +DEMID+IGVTKG G++GV +RW +
Sbjct: 180 IMEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKVY++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMG 290
>gi|392878726|gb|AFM88195.1| 60S ribosomal protein L3 [Callorhinchus milii]
Length = 403
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 252/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT+IETPPM++VG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +EGKK ++ +KKY V+RVLAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTIAEK+D+A E+Q+ V+ VF +DEMID+IGVTKG G++GV +RW +
Sbjct: 180 IMEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKVY++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMG 290
>gi|410903147|ref|XP_003965055.1| PREDICTED: 60S ribosomal protein L3-like [Takifugu rubripes]
Length = 403
Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust.
Identities = 200/291 (68%), Positives = 250/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGK K+FPKDDPSKP +TAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPSKPVHMTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+V+GVVGYV TP GLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVIGVVGYVNTPSGLRSFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ DEGKK ++ +KKY V+RV+ HTQ+R + ++QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFNLMKKYCQVIRVITHTQMRLLP-IRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGGTI++KVD+A E+ IP++ VF +DEMID+IG+TKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGTISDKVDWAREKLEQSIPINTVFTQDEMIDVIGITKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|255725262|ref|XP_002547560.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404]
gi|240135451|gb|EER35005.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404]
Length = 389
Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/303 (72%), Positives = 261/303 (86%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPPM+VVGVVGYV+TPRGLRSL TVWA+HLSEEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y TD K I+ +L +IKKYASVVRVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYATDA--KQIETELARIKKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG++++KVD+A FEK++ VD+VF++DEMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVSDKVDWAREHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEAN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|387914664|gb|AFK10941.1| 60S ribosomal protein L3 [Callorhinchus milii]
Length = 403
Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/291 (70%), Positives = 252/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT+IETPPM++VG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +EGKK ++ +KKY V+RVLAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTIAEK+D+A E+Q+ V+ VF +DEM+D+IGVTKG G++GV +RW +
Sbjct: 180 IMEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMVDVIGVTKGHGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKVY++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMG 290
>gi|402854487|ref|XP_003891900.1| PREDICTED: 60S ribosomal protein L3-like [Papio anubis]
Length = 403
Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/291 (70%), Positives = 253/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHI+R+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIMREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+ V+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIHVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVN GT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNRGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGL KVACIGAWHPA V+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLHKVACIGAWHPAHVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|392879502|gb|AFM88583.1| 60S ribosomal protein L3 [Callorhinchus milii]
Length = 403
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 252/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT+IETPPM++VG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +EGKK ++ +KKY V+RVLAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCLVIRVLAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTIAEK+D+A E+Q+ V+ VF +DEMID+IGVTKG G++GV +RW +
Sbjct: 180 IMEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKVY++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMG 290
>gi|312088746|ref|XP_003145979.1| 60S ribosomal protein L3 [Loa loa]
gi|307758859|gb|EFO18093.1| 60S ribosomal protein L3 [Loa loa]
Length = 386
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/306 (67%), Positives = 253/306 (82%), Gaps = 14/306 (4%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+G+KAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPSKPIHLTAFMGFKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVT++ETPPM++VGVVGY+ TPRG R TVWA+HLSE+ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAF K++K+++ ++G KSIQA L K+KKY S++RV+AHTQ AH
Sbjct: 121 NWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVIAHTQ-----------AH 169
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI EKVD+AY FEKQ+PVD++F +DEMID+IGVTKGKG++GV +RW +
Sbjct: 170 IMEIQVNGGTIPEKVDWAYEHFEKQVPVDSIFAQDEMIDVIGVTKGKGFKGVTSRWHTKK 229
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHT 317
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y++GK +
Sbjct: 230 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRIGKSCLTEEGKKN 289
Query: 318 GITEFD 323
G T++D
Sbjct: 290 GGTDYD 295
>gi|440903024|gb|ELR53738.1| 60S ribosomal protein L3, partial [Bos grunniens mutus]
Length = 402
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/290 (70%), Positives = 252/290 (86%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V+
Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 60
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPPM++VG+VGYV+TPRGLR+ T++A+H+S+E +RRFYKN
Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 120
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY K+++ +GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHL
Sbjct: 121 WHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 179
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
ME+QVNGGT+AEK+D+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 180 MEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 239
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTHRGLRKVACIGAWHPA V+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 PRKTHRGLRKVACIGAWHPAWVAFSVARAGQKGYHHRTEINKKIYKIGQG 289
>gi|241952212|ref|XP_002418828.1| 60S ribosomal protein L3 [Candida dubliniensis CD36]
gi|223642167|emb|CAX44134.1| ribosomal protein, large subunit, putative [Candida dubliniensis
CD36]
Length = 389
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/303 (72%), Positives = 261/303 (86%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPPM+VVGVVGYV+TPRGLRSL TVWA+HLSEEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y TD K ++ +L +IKKYASVVRVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYATDA--KQVETELARIKKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG++++KVD+A FEK++ VD+VF++DEMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEAN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|47217938|emb|CAG02221.1| unnamed protein product [Tetraodon nigroviridis]
Length = 402
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/290 (69%), Positives = 249/290 (85%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR+ RHRGK K+FPKDDPSKP +TAFLGYKAGMTHIVR+V+
Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPSKPVHMTAFLGYKAGMTHIVREVD 60
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPPM+V+GVVGYV TP GLRS T++A+H+S+E +RRFYKN
Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMIVIGVVGYVNTPSGLRSFKTIFAEHISDECKRRFYKN 120
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY K+++ DEGKK ++ +KKY V+RV+ HTQ+R + ++QKK+HL
Sbjct: 121 WYKSKKKAFTKYCKKWQDDEGKKQLEKDFALMKKYCQVIRVITHTQMRLLP-IRQKKSHL 179
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
ME+Q+NGGTIA+KVD+A E+ IPV+ VF +DEMID+IGVTKG GY+GV +RW +L
Sbjct: 180 MEVQLNGGTIADKVDWAREKLEQSIPVNTVFAQDEMIDVIGVTKGHGYKGVTSRWHTKKL 239
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 289
>gi|340724650|ref|XP_003400694.1| PREDICTED: 60S ribosomal protein L3-like [Bombus terrestris]
Length = 414
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/291 (70%), Positives = 250/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFVGYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+E PPM+VVGVVGY++TP GLR+L TVWA+HLSE+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILEAPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK+++ D G+KSI++ KI KY VVR++AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIESDFAKIIKYCKVVRIVAHTQMKLLR-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTI +KV +A EK +PV+ VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIEDKVQWAREHLEKPVPVNNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|342319576|gb|EGU11523.1| 60S ribosomal protein L3 [Rhodotorula glutinis ATCC 204091]
Length = 439
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/320 (67%), Positives = 265/320 (82%), Gaps = 2/320 (0%)
Query: 4 PALEHNESVAAAAQRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRL 63
P L S+ ++ RMSHRK+EHPR GSLGFLPRKRAARHRGK K+FPKDD P L
Sbjct: 33 PRLLTYASLLCSSSSVRMSHRKYEHPRCGSLGFLPRKRAARHRGKAKSFPKDDAKAPVHL 92
Query: 64 TAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLN 123
TAFLGYKAGMTH+VRD+++PGSK+HKKE EAVT+IETPPM+VVGVVGYV+TPRGLRSL
Sbjct: 93 TAFLGYKAGMTHVVRDLDRPGSKMHKKEVVEAVTVIETPPMVVVGVVGYVETPRGLRSLT 152
Query: 124 TVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVL 183
TVWA+HLS+EV+RRFYKNW +SKKKAFTKY+K++ S+ +LE+I KY +VVRVL
Sbjct: 153 TVWAEHLSDEVKRRFYKNWYRSKKKAFTKYAKKHAEQGSASSVARELERITKYCTVVRVL 212
Query: 184 AHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGV 243
AHTQIRK GL QKKAHLMEIQVNGG++A+KV++A FEK + V ++F++DE ID+IGV
Sbjct: 213 AHTQIRKT-GLAQKKAHLMEIQVNGGSVADKVEFAKSHFEKTVDVSSIFEQDENIDVIGV 271
Query: 244 TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNK 303
T+G G+EGV RWG +LPRKTH+GLRKVACIGAWHP++V ++VARAGQ+GYHHRTE+NK
Sbjct: 272 TQGHGFEGVTHRWGTKKLPRKTHKGLRKVACIGAWHPSKVMYSVARAGQDGYHHRTELNK 331
Query: 304 KVYKLGKGGQESHTGITEFD 323
KVY++GK E + TEFD
Sbjct: 332 KVYRIGKADDEG-SASTEFD 350
>gi|119580720|gb|EAW60316.1| ribosomal protein L3, isoform CRA_g [Homo sapiens]
Length = 286
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/284 (72%), Positives = 250/284 (88%), Gaps = 1/284 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK 304
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKK 283
>gi|383848395|ref|XP_003699836.1| PREDICTED: 60S ribosomal protein L3-like [Megachile rotundata]
Length = 432
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/291 (69%), Positives = 251/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
+SHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 18 ISHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFVGYKAGMTHVVREA 77
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGY++TP GLR+L TVWA+HLSE+ RRRFYK
Sbjct: 78 DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 137
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK+++ D G+KSI++ +KI KY VVR++AHTQ++ ++ +QKKAH
Sbjct: 138 NWYKSKKKAFTKASKKWQDDLGRKSIESDFKKIIKYCKVVRIIAHTQMKLLRQ-RQKKAH 196
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTI +KV +A EK +P+ VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 197 IMEIQLNGGTIEQKVQWAREHLEKPVPISNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 256
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 257 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 307
>gi|358399714|gb|EHK49051.1| hypothetical protein TRIATDRAFT_297774 [Trichoderma atroviride IMI
206040]
Length = 391
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/303 (68%), Positives = 255/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTATMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K +KKE EAV+II+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKANKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G +I +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSDNSG-STITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG++AEKVD+ FEK + +D++F++DE+ID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQINGGSVAEKVDFGKDLFEKPVSIDSIFEQDEVIDVIAVTKGHGFSGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQEGYHHRTSVNHKVYRIGKGDAED-SAST 297
Query: 321 EFD 323
E D
Sbjct: 298 ETD 300
>gi|345480304|ref|XP_001600115.2| PREDICTED: 60S ribosomal protein L3-like [Nasonia vitripennis]
Length = 426
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/297 (70%), Positives = 252/297 (84%), Gaps = 4/297 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPTKPVHLTAFIGYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGY++TP GLR+L TVWA+HLSE+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK+++ D G+ SI+ +KI KY VVRV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRASIEKDFKKIVKYCKVVRVIAHTQMKLLRQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI +KV +A EK IPV+ VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGTIEDKVKWAREHLEKSIPVNNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHT 317
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++ GQE HT
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI---GQEIHT 293
>gi|68491020|ref|XP_710682.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|68491039|ref|XP_710673.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|46431906|gb|EAK91425.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|46431916|gb|EAK91434.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|238883805|gb|EEQ47443.1| 60S ribosomal protein L3 [Candida albicans WO-1]
Length = 389
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/303 (72%), Positives = 261/303 (86%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPPM+VVGVVGYV+TPRGLRSL TVWA+HLSEEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y TD K ++ +L +IKKYASVVRVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYATDA--KQVETELARIKKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG++++KVD+A FEK++ VD+VF++DEMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEAN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|392881234|gb|AFM89449.1| 60S ribosomal protein L3 [Callorhinchus milii]
Length = 403
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/291 (70%), Positives = 251/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR RHRGKVK FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKGFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT+IETPPM++VG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +EGKK ++ +KKY V+RVLAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTIAEK+D+A E+Q+ V+ VF +DEMID+IGVTKG G++GV +RW +
Sbjct: 180 IMEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NK+VY++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKRVYRVGMG 290
>gi|189240524|ref|XP_971875.2| PREDICTED: similar to ribosomal protein L3e [Tribolium castaneum]
gi|270011378|gb|EFA07826.1| hypothetical protein TcasGA2_TC005395 [Tribolium castaneum]
Length = 409
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/291 (70%), Positives = 247/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPMM+VGVVGY++TP GLR+L T+WA+HLSE+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTILETPPMMIVGVVGYIETPHGLRALATIWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK++ D GKKSI+ +KI KY VVRV+AHTQ+ K+ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWNDDLGKKSIERDFKKIIKYCKVVRVIAHTQM-KLLNQRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG++ +KV +A EK IPV VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGSVVDKVQWAREHLEKPIPVAQVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAG 290
>gi|409049883|gb|EKM59360.1| hypothetical protein PHACADRAFT_205564 [Phanerochaete carnosa
HHB-10118-sp]
Length = 403
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/304 (70%), Positives = 263/304 (86%), Gaps = 3/304 (0%)
Query: 20 RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD 79
+MSHRK+E PRHGSLGFLPRKRAARHRGKVKAFPKDD KP LTA +GYKAGMTH+VRD
Sbjct: 15 KMSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDIKKPVHLTAVMGYKAGMTHVVRD 74
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
+++PGSK+HK+E EAVT+IETPPM+VVGVVGYV+TPRGLR+L TVWA HLS+E++RRFY
Sbjct: 75 LDRPGSKMHKREVVEAVTVIETPPMVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFY 134
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
KNW +SKKKAFT+Y+K+ D G KS+ +LE+I+KY +VVRVLAHTQIRK GL QKKA
Sbjct: 135 KNWYRSKKKAFTRYAKKVSED-GGKSVTRELERIRKYCTVVRVLAHTQIRKT-GLSQKKA 192
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
HLMEIQVNGG+IA+KV++A+G FEK PV +VF++DE++D+I VTKG G+EGV RWG
Sbjct: 193 HLMEIQVNGGSIADKVEFAHGLFEKPFPVTSVFEQDEVVDVIAVTKGHGFEGVTHRWGTK 252
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
+LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G G++
Sbjct: 253 KLPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIG-SGEDVANAS 311
Query: 320 TEFD 323
TE D
Sbjct: 312 TESD 315
>gi|342874075|gb|EGU76148.1| hypothetical protein FOXB_13320 [Fusarium oxysporum Fo5176]
Length = 391
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/303 (67%), Positives = 254/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K +KKE EAVTI++TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGAKANKKEIVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV + FEK + + ++F++DEMID++ VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVSFGQELFEKPVDISSIFEQDEMIDVVAVTKGHGFEGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKG + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQRGYHHRTSVNHKIYRIGKGDADDNAA-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EID 300
>gi|302915465|ref|XP_003051543.1| 60S ribosomal protein L3 [Nectria haematococca mpVI 77-13-4]
gi|256732482|gb|EEU45830.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 391
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/303 (68%), Positives = 253/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K +KKE EAVTI++TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKANKKEIVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY ++VRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTIVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KV + FEK + + ++F++DEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQVNGGSVADKVAFGQELFEKPVDISSIFEQDEMIDVIAVTKGHGFNGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKG E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDAEDNAA-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EID 300
>gi|350424727|ref|XP_003493892.1| PREDICTED: 60S ribosomal protein L3-like [Bombus impatiens]
Length = 414
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/291 (69%), Positives = 249/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFVGYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+E PPM+VVGVVGY++TP GLR+L TVWA+HLSE+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILEAPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK+++ D G+KSI++ KI KY VVR++AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIESDFAKIIKYCKVVRIIAHTQMKLLR-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTI +KV +A E +PV+ VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIVDKVQWAREHLENPVPVNNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|308798657|ref|XP_003074108.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
ribosomal p (ISS) [Ostreococcus tauri]
gi|116000280|emb|CAL49960.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
ribosomal p (ISS), partial [Ostreococcus tauri]
Length = 421
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/322 (67%), Positives = 264/322 (81%), Gaps = 6/322 (1%)
Query: 2 SLPALEHNESVAAAAQRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPC 61
S A + + A+ R R SH PR+G+LGFLP+KR+ R RGKVK+FPKDD SKP
Sbjct: 19 SFLATRVRQCLTASLNRYRPSHH--TDPRYGNLGFLPKKRSQRSRGKVKSFPKDDASKPP 76
Query: 62 RLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRS 121
LTAF+G+KAGMTH+VRDVEKPGSK+HKKE C+AVTIIE P ++VVG+VGYV+TP+GLR
Sbjct: 77 HLTAFMGFKAGMTHVVRDVEKPGSKMHKKEQCDAVTIIECPELVVVGLVGYVRTPKGLRG 136
Query: 122 LNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVR 181
TVWA+HL++E+RRRFYKNW KSKKKAFTKY+K Y SI+ LE++KK V+R
Sbjct: 137 KKTVWAEHLNDEIRRRFYKNWFKSKKKAFTKYAKNYTNG----SIEKDLEELKKSCDVIR 192
Query: 182 VLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 241
V+AHTQ+RK+KGLKQKKAH+MEIQVNGG A KVD+ + FEK +PVD+VFQ+DEMID+I
Sbjct: 193 VIAHTQVRKVKGLKQKKAHIMEIQVNGGDAAAKVDFGFALFEKTVPVDSVFQQDEMIDLI 252
Query: 242 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 301
GVTKGKG++GVVTRWGVT+LPRKTHRGLRKV CIGAWHP+RVS+TVARAGQ GYHHRTE+
Sbjct: 253 GVTKGKGFQGVVTRWGVTKLPRKTHRGLRKVGCIGAWHPSRVSYTVARAGQMGYHHRTEL 312
Query: 302 NKKVYKLGKGGQESHTGITEFD 323
NKKVYK+GK G + T+FD
Sbjct: 313 NKKVYKIGKAGTANFGANTDFD 334
>gi|324517742|gb|ADY46908.1| 60S ribosomal protein L3, partial [Ascaris suum]
Length = 402
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/306 (67%), Positives = 257/306 (83%), Gaps = 4/306 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+G+KAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSRRHRGKVKAFPKDDPTKPIHLTAFIGFKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVTI+ETPPM++VG+VGY+ TPRG R TVWA+HLSE+ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAF K++K+++ ++G+KSI++ L K+KKY S +RV+AHTQ++ MK ++KKAH
Sbjct: 121 NWHTSKKKAFQKHAKKWQDEDGRKSIESDLNKMKKYCSKIRVIAHTQMKVMKH-REKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGT+ EKVD+A EKQ+ VD+VF +DEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTVPEKVDWAKEHLEKQVAVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHT 317
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y+LGK +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKRN 299
Query: 318 GITEFD 323
G TE+D
Sbjct: 300 GGTEYD 305
>gi|431900074|gb|ELK08009.1| 60S ribosomal protein L3 [Pteropus alecto]
Length = 533
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/282 (71%), Positives = 250/282 (88%), Gaps = 1/282 (0%)
Query: 30 RHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 89
+HGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++K
Sbjct: 28 KHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNK 87
Query: 90 KETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKA 149
KE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ T++A+H+S+E +RRFYKNW KSKKKA
Sbjct: 88 KEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKA 147
Query: 150 FTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 209
FTKY K+++ D+GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHLMEIQVNGG
Sbjct: 148 FTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGG 206
Query: 210 TIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 269
T+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGL
Sbjct: 207 TVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGL 266
Query: 270 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
RKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 267 RKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 308
>gi|242219392|ref|XP_002475476.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R]
gi|220725335|gb|EED79327.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R]
Length = 388
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 263/303 (86%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVKAFPKDD KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDAQKPVHLTAIMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAV+IIETPPM+VVGVVGYV+TPRGLR+L TVWA HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVSIIETPPMVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ D G KSI +LE+I+KY +VVRVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHAED-GGKSIGRELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KV++A+G FEK + V VF++DE++D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFAHGLFEKPVEVSTVFEQDEVVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G G+++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIG-SGEDTGNAST 297
Query: 321 EFD 323
E D
Sbjct: 298 EHD 300
>gi|70909601|emb|CAJ17226.1| ribosomal protein L3e [Scarabaeus laticollis]
Length = 410
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/291 (70%), Positives = 251/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFP+DDPSKP LTAF+GYKAGMTH++R+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPEDDPSKPVHLTAFIGYKAGMTHVLREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM++VGVVGY++TP GLR+L TVWA+HLSE+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTILETPPMVIVGVVGYIETPHGLRALATVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK+++ + GKKSI+ L+KI KY VVRV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDELGKKSIERDLKKIVKYCKVVRVIAHTQMKLLKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTI +KV +A EK IPV+ VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIDDKVKWAREHLEKPIPVNNVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAG 290
>gi|400594267|gb|EJP62123.1| 60S ribosomal protein L3 [Beauveria bassiana ARSEF 2860]
Length = 392
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/303 (68%), Positives = 252/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD
Sbjct: 1 MSHRKHEEPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDS 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K +KKE EAVTI++TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGAKSNKKEVVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ G SI +LE++KKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASIARELERMKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+I++KVD+ FEK + VD++F++DEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQVNGGSISDKVDFGKELFEKPVSVDSIFEQDEMIDVIAVTKGHGFTGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP V +TVARAGQ+GYHHRT +N KVY++GK G E + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSVNHKVYRIGKAGAED-SAST 297
Query: 321 EFD 323
+ D
Sbjct: 298 DMD 300
>gi|351699299|gb|EHB02218.1| 60S ribosomal protein L3 [Heterocephalus glaber]
Length = 419
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/282 (72%), Positives = 247/282 (87%), Gaps = 1/282 (0%)
Query: 30 RHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 89
RHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++K
Sbjct: 26 RHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREVDRPGSKVNK 85
Query: 90 KETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKA 149
KE EAVTI+ETPPM+VVG+VGYV+TPRGLRS TV+A+H+S+E +RRFYKNW KSKKKA
Sbjct: 86 KEVVEAVTIVETPPMVVVGIVGYVETPRGLRSFKTVFAEHISDECKRRFYKNWHKSKKKA 145
Query: 150 FTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 209
FTKY K+++ D GKK + +KKY V+R++AHTQ+R + L+QKKAHLMEIQVNGG
Sbjct: 146 FTKYCKKWQDDMGKKQLDKDFSSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGG 204
Query: 210 TIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 269
T+AEK+D+A E+QIPV VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGL
Sbjct: 205 TVAEKLDWARERLEQQIPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGL 264
Query: 270 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
RKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 265 RKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 306
>gi|389744357|gb|EIM85540.1| 60S ribosomal protein L3 [Stereum hirsutum FP-91666 SS1]
Length = 388
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 263/303 (86%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT++ETPP++VVGVVGYV+TPRGLR+L TVWA HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVVETPPLIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ D G KSI +LE+I+KY +VVRVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHAEDNG-KSITRELERIRKYCTVVRVLAHTQIRKT-GLAQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++ +KV++A+G FEK + V +VF++DE+ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSVTDKVEFAHGLFEKPVEVGSVFEQDEVIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G G + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGLGTDDGNAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 ESD 300
>gi|392593174|gb|EIW82500.1| hypothetical protein CONPUDRAFT_81978 [Coniophora puteana
RWD-64-598 SS2]
Length = 388
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 263/303 (86%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAV+I+ETPPMMVVGVVGYV+TPRGLR+L TVWA HLS+EV+RRFYK
Sbjct: 61 DRPGSKMHKREIVEAVSIVETPPMMVVGVVGYVETPRGLRTLTTVWANHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ D G KS +LE+I+KY +VVRVL+HTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHAED-GGKSTARELERIRKYCTVVRVLSHTQIRKT-GLSQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++A G FEK V+++F++DE+ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAQGLFEKPFDVNSIFEQDEVIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++G G E++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGTDEANAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 ESD 300
>gi|225684621|gb|EEH22905.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb03]
Length = 384
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/292 (70%), Positives = 249/292 (85%), Gaps = 3/292 (1%)
Query: 32 GSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 91
GSL FLPRKR+ARHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+E+PG+K+HKKE
Sbjct: 4 GSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTVVRDLERPGAKMHKKE 63
Query: 92 TCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFT 151
EAVTI+ETPPM+ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYKNW KSKKKAFT
Sbjct: 64 IVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFT 123
Query: 152 KYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTI 211
KY+K + + G S+ +LE+IKKY +VVR+LAHTQIRK LKQKKAHLME+QVNGG+I
Sbjct: 124 KYAKNHSENTG-ASVSRELERIKKYCTVVRLLAHTQIRKTP-LKQKKAHLMEVQVNGGSI 181
Query: 212 AEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 271
A+KVD+A+G FEK I +D+VF++DEMID+I VTKG G+ GV +RWG +LPRKTH+GLRK
Sbjct: 182 ADKVDFAHGLFEKPIQIDSVFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLPRKTHKGLRK 241
Query: 272 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
VACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y++GKG E + TEFD
Sbjct: 242 VACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEGNAS-TEFD 292
>gi|326509435|dbj|BAJ91634.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 263/303 (86%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PR GSLGFLPRKRAARHRGKVK+FPKDDPSKP LTA +GYKAGM+H+VRD+
Sbjct: 1 MSHRKFEEPRSGSLGFLPRKRAARHRGKVKSFPKDDPSKPVHLTALMGYKAGMSHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT+IETPPM+VVGVVGYV+TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFTKY+K++ + G SI ++E+I+KY +VVRVLAHTQIRK GLKQKKAH
Sbjct: 121 NWYRSKKKAFTKYAKKHSENNG-SSIAREIERIRKYCTVVRVLAHTQIRKT-GLKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+K+++A FEK + V ++F+++++ID+IGVT G G EGV RWGVTR
Sbjct: 179 LMEIQVNGGSVADKLEFAKSHFEKTVDVRSIFEQNQVIDVIGVTSGHGTEGVTHRWGVTR 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP+ V ++V RAGQNGYHHRTE NKK+Y++G G + +G T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSNVMYSVPRAGQNGYHHRTEKNKKIYRIGT-GSDVKSGST 297
Query: 321 EFD 323
E+D
Sbjct: 298 EYD 300
>gi|315115447|gb|ADT80696.1| ribosomal protein L3 [Euphydryas aurinia]
Length = 412
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/291 (70%), Positives = 251/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTIIETPPM+ VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPYGLRALLTVWAEHMSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW K KKKAFTK SK+++ + G+KSI+ +K+ +Y SV+R++AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKSSKKWQDELGRKSIEKDFKKMIRYCSVIRIIAHTQMKLLK-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+ +KV +A EK IP+D+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVDDKVKWAREHLEKPIPIDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y+LG+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRLGQG 290
>gi|213403598|ref|XP_002172571.1| 60S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
gi|213406091|ref|XP_002173817.1| 60S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
gi|212000618|gb|EEB06278.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
gi|212001864|gb|EEB07524.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
Length = 388
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/303 (71%), Positives = 260/303 (85%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFE PRHGSLGFLPRKRAAR RGKVK+FPKDD SKP LTAFLGYKAGMTHIVRD+
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRAARARGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT++ETPPM+VVGVVGYV+TPRGLRSL TVWA+HLSEE++RRFYK
Sbjct: 61 DRPGSKMHKREILEAVTVLETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+Y E +SI +LE+IKKY SVVRVLAHTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKYA--ETTQSITRELERIKKYCSVVRVLAHTQIRKTP-LTQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG++A+KV++A FEK + V +VF+++E++D+IG+TKGKG EGV TRWG R
Sbjct: 178 LMEIQINGGSVADKVEWAREHFEKTVDVKSVFEQNEIVDVIGITKGKGVEGVTTRWGTKR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP+ V +TVARAG NGY HRT++N K+Y++G G ++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPSNVGWTVARAGNNGYMHRTQLNSKIYRIG-SGDDAKNGAT 296
Query: 321 EFD 323
+FD
Sbjct: 297 DFD 299
>gi|354548076|emb|CCE44812.1| hypothetical protein CPAR2_406150 [Candida parapsilosis]
Length = 389
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 260/303 (85%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLSEE+RRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEIRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y +D K I+ +L +IKKYASVVRVLAHTQ++K L KKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYASDA--KQIETELARIKKYASVVRVLAHTQVKKTP-LASKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I++KVD+A FEK++ VD+VF++DEMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSISDKVDWAKEHFEKEVSVDSVFEQDEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++GKG ES+ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDESN-GST 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|156359547|ref|XP_001624829.1| predicted protein [Nematostella vectensis]
gi|156211631|gb|EDO32729.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/292 (70%), Positives = 245/292 (83%), Gaps = 2/292 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR RHRGKVK+FPKDD + P LTAF+G+KAGMTHI+R+V
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRCKRHRGKVKSFPKDDNTLPPHLTAFIGFKAGMTHILREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKL+KKE EAVTIIETPPMMVVGVVGY++TPRG+R L T+WA+HLSEE +RRFYK
Sbjct: 61 EKPGSKLNKKEKVEAVTIIETPPMMVVGVVGYIETPRGMRVLKTIWAEHLSEECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NWC SKKKAFTK SK++ D+GKKSI+ +KKY V+RV+ HTQ + +K ++QKKAH
Sbjct: 121 NWCNSKKKAFTKASKRWADDDGKKSIEEDFNTMKKYCKVIRVICHTQQKLLK-MRQKKAH 179
Query: 201 LMEIQVNGG-TIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
+MEIQVNGG +AEKVD+ E PV VF DEMID+IGVTKG G++GV RWG
Sbjct: 180 IMEIQVNGGKDVAEKVDWCRERLENPAPVRKVFSPDEMIDVIGVTKGHGFKGVTYRWGTK 239
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+LPRKTH+GLRKVACIGAWHPARVSF+VARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPARVSFSVARAGQAGYHHRTELNKKIYRIGQG 291
>gi|112982798|ref|NP_001037126.1| ribosomal protein L3 [Bombyx mori]
gi|54609193|gb|AAV34812.1| ribosomal protein L3 [Bombyx mori]
Length = 413
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 251/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTIIETPPM+ VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW K KKKAFTK SK+++ + G+KSI+ +K+ +Y SVVRV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLK-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTI +KV +A EK IPVD+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|409079895|gb|EKM80256.1| hypothetical protein AGABI1DRAFT_84723 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198339|gb|EKV48265.1| hypothetical protein AGABI2DRAFT_135382 [Agaricus bisporus var.
bisporus H97]
Length = 388
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/303 (69%), Positives = 264/303 (87%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKR+ARHRGKVK+FPKDDP KP LTA++GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRSARHRGKVKSFPKDDPKKPVHLTAYMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSK+HK+E EAVTI+ETPPMMVVGVVGYV+TPRGLR+L TVWA HLS+E++RRFYK
Sbjct: 61 ERPGSKMHKREIVEAVTIVETPPMMVVGVVGYVETPRGLRTLTTVWANHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ D G KSI +LE+I+KY +VVRVLAHTQIRK L QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHAED-GGKSIGRELERIRKYCTVVRVLAHTQIRKTP-LSQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV++A+G FEK + + +F++DE++D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAHGLFEKPVEISTIFEQDEVVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK++++G G +++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIFRVGSGADDANAS-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EAD 300
>gi|440798172|gb|ELR19240.1| ribosomal protein L3, putative [Acanthamoeba castellanii str. Neff]
Length = 398
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/309 (66%), Positives = 248/309 (80%), Gaps = 8/309 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF PRKRAARHRGK K FPKDD SK LTAFL YKAGMTH+VRD+
Sbjct: 1 MSHRKFSAPRHGSLGFTPRKRAARHRGKCKTFPKDDASKKPHLTAFLAYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGS++HK+E EAVTI+E PPM+VVG+VGY+ TP G+R+L TVWAQHLS E RRFYK
Sbjct: 61 DKPGSRMHKREVVEAVTILEAPPMVVVGIVGYIDTPSGMRTLTTVWAQHLSAECLRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFTKY K ++ + ++ ++KKY +VVRV+AHTQ+RK+ +QKKAH
Sbjct: 121 NWYRSKKKAFTKYQKALAANKA-RVFDREVARLKKYCTVVRVIAHTQVRKL-NQRQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGG+IA+KVD+A EK +PVD VF E++D IGVTKGKGYEGV TRWGVTR
Sbjct: 179 IMEIQVNGGSIADKVDFAVSLLEKPVPVDNVFGDSELVDTIGVTKGKGYEGVTTRWGVTR 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES----- 315
LPRKTHRGLRKVACIGAWHPA V ++V RAGQNGYHHRTE+NKK+Y++GKG ++
Sbjct: 239 LPRKTHRGLRKVACIGAWHPAAVQWSVPRAGQNGYHHRTELNKKIYRIGKGVRQEGGKIV 298
Query: 316 -HTGITEFD 323
+ TEFD
Sbjct: 299 HNNASTEFD 307
>gi|448523008|ref|XP_003868833.1| Rpl3 ribosomal protein, large subunit [Candida orthopsilosis Co
90-125]
gi|380353173|emb|CCG25929.1| Rpl3 ribosomal protein, large subunit [Candida orthopsilosis]
Length = 389
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 260/303 (85%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLSEE+RRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEIRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y +D K I+ +L +IKKYASVVRVLAHTQ++K L KKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYASDA--KQIETELARIKKYASVVRVLAHTQVKKTP-LASKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I++KVD+A FEK++ VD+VF++DEMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSISDKVDWAKEHFEKEVSVDSVFEQDEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEAN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|355769998|gb|EHH62843.1| hypothetical protein EGM_19535, partial [Macaca fascicularis]
Length = 403
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/290 (70%), Positives = 251/290 (86%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRK + RHRGKVK+F KDDPSKP LTAFLGYKAGM HIVR+V+
Sbjct: 2 SHRKFSAPRHGSLGFLPRKLSIRHRGKVKSFHKDDPSKPVHLTAFLGYKAGMAHIVREVD 61
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 121
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTK+ K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHL
Sbjct: 122 WHKSKKKAFTKHCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 180
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHH TE+NKK+YK+G+G
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHCTEINKKIYKIGQG 290
>gi|408399768|gb|EKJ78861.1| hypothetical protein FPSE_01004 [Fusarium pseudograminearum CS3096]
Length = 391
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/303 (67%), Positives = 252/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDHKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K +KKE EAVTI++TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGAKANKKEIVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG+IA+KV + FEK + V ++F++DEMID++ VTKG G+ GV RWG +
Sbjct: 179 LMEIQVNGGSIADKVSFGQELFEKPVDVSSIFEQDEMIDVVAVTKGHGFNGVTARWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKG + + T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-T 297
Query: 321 EFD 323
E D
Sbjct: 298 EID 300
>gi|392580132|gb|EIW73259.1| hypothetical protein TREMEDRAFT_37246 [Tremella mesenterica DSM
1558]
Length = 390
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/303 (66%), Positives = 257/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PR GSL FLP+KRAARHRG+VK+FPKDDP KP LTA LGYKAGMTH+VRD+
Sbjct: 1 MSHRKYEEPRSGSLAFLPKKRAARHRGRVKSFPKDDPKKPVHLTAMLGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT+IETPP+++VGVVGY++TPRGLRSL TVWA+HLS+E++RRFY+
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPIVIVGVVGYIETPRGLRSLTTVWAEHLSDELKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT+Y+K++ + G +S+ +LE+IKKY +VVRVLAHTQ+ K GL QKK+H
Sbjct: 121 NWYKSKKKAFTRYAKKHSENNG-QSVARELERIKKYCTVVRVLAHTQLSKT-GLVQKKSH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG++A+KV++A FEK++ V+++F+KDE+ID+I VTKG G GV+ RWGVT+
Sbjct: 179 LAEIQVNGGSVADKVEFARSHFEKEVAVESIFEKDEVIDVIAVTKGHGVSGVIARWGVTK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRG RKVACIGAWHP++V F+VARAGQ GYH+R N K+Y++G G + G T
Sbjct: 239 LPRKTHRGARKVACIGAWHPSKVMFSVARAGQRGYHNRRAQNLKIYRVG-AGNDPKNGST 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>gi|18253047|gb|AAL62468.1| ribosomal protein L3 [Spodoptera frugiperda]
Length = 413
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/291 (70%), Positives = 250/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDD SKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDASKPVHLTAFIGYKAGMTHVVREP 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTIIETPPM+ VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW K KKKAFTK SK+++ + G+KSI+ +K+ +Y SVVRV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLK-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI +KV +A EK IPVD+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|1350745|sp|P49149.2|RL3_TOXCA RecName: Full=60S ribosomal protein L3
gi|596082|gb|AAA92285.1| ribosomal protein L3 [Toxocara canis]
Length = 402
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/306 (66%), Positives = 255/306 (83%), Gaps = 4/306 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+ +KAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVTI E PPM++VG+VGY+ TPRG R TVWA+HLSE+ R RFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRGRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAF K++K+++ ++G+KSI+A L K+KKY S +RV+AHTQ++ MK ++KKAH
Sbjct: 121 NWHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKYCSKIRVIAHTQMKVMKH-REKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKVD+A EKQ+PVD+VF +DEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQINGGTVAEKVDWAREHLEKQVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHT 317
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y+LGK +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKN 299
Query: 318 GITEFD 323
G T++D
Sbjct: 300 GGTDYD 305
>gi|328773128|gb|EGF83165.1| hypothetical protein BATDEDRAFT_29178 [Batrachochytrium
dendrobatidis JAM81]
Length = 390
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 262/303 (86%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHGSLGFLPRKRA RHRGK K+FP+DD KP LTAFLGYKAGMTHIVRD+
Sbjct: 1 MSHCKFEHPRHGSLGFLPRKRARRHRGKCKSFPRDDAKKPVHLTAFLGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EAV++IE PPM+VVGVVGYV+TPRGLRSL TVWA+HLSEEVRRRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVSVIEAPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSK+KAFTKY+K+Y T+ K I++QL++I+KY VVRV+ HTQI+K++ L KKAH
Sbjct: 121 NWYKSKRKAFTKYAKKY-TEADAKPIESQLQRIQKYCQVVRVICHTQIQKVR-LGTKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG++A+KV +A FEK + + ++F++DEMIDIIG+TKG G+EGVV RWGV +
Sbjct: 179 VMEIQLNGGSVADKVAWAKDHFEKTVELSSIFEQDEMIDIIGITKGHGFEGVVARWGVKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+RV F V RAGQ+GYHHRTEMNKKVY++GK G + ++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSRVQFAVPRAGQDGYHHRTEMNKKVYRVGKAG-DKNSAST 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|384497998|gb|EIE88489.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
Length = 387
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/303 (67%), Positives = 252/303 (83%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGF PRKR HRG+VKA+PKDD KP LTAF+GYKAGMTHIVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFGPRKRTRSHRGRVKAYPKDDAKKPVHLTAFMGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSK+HKKE EAVT+IE P M++VGVVGYV+TPRGLRSL TVWA+HLSEE +RRFYK
Sbjct: 61 ERPGSKMHKKEIVEAVTVIEAPAMVIVGVVGYVETPRGLRSLTTVWAEHLSEEAKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFTKY+++Y EG K + +LE+IKKY SVVRV+AHTQI K K L Q+KAH
Sbjct: 121 NWYRSKKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHTQISKAK-LHQRKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG++ +KVD+A FEK++ V ++F++DEMIDII TKG G+EGV RWG +
Sbjct: 178 IMEIQLNGGSVEQKVDFAREHFEKEVTVGSIFEQDEMIDIIATTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKK+Y++ G ++ +G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIYRIATGA-DAKSGTT 296
Query: 321 EFD 323
E+D
Sbjct: 297 EYD 299
>gi|403218316|emb|CCK72807.1| hypothetical protein KNAG_0L01880 [Kazachstania naganishii CBS
8797]
Length = 387
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/303 (68%), Positives = 253/303 (83%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHG LGFLPRKRAA RG+VK+FPKDD SK LT+FLGYKAGM+ IVRD+
Sbjct: 1 MSHRKFEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKAVALTSFLGYKAGMSTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TP ++VVG+VGYV+TPRGLRSL TVWA+HLS+E++R+FYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPAIVVVGLVGYVETPRGLRSLTTVWAEHLSDEIKRKFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D +I+ +L +IKKYA+VVRVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSTKYAQD--GTAIERELARIKKYATVVRVLVHTQIRKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ EIQ+NGG+I++KVD+A FEK + VD+VF+ +EMID++ VTKG G+EGV RWG TR
Sbjct: 178 MAEIQLNGGSISDKVDWAREHFEKTVSVDSVFENNEMIDVVAVTKGHGFEGVTHRWGTTR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V ++VARAGQNGYHHRT +N K+Y++GKG ES+ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQNGYHHRTSINHKIYRVGKGEDESN-GST 296
Query: 321 EFD 323
FD
Sbjct: 297 SFD 299
>gi|332372868|gb|AEE61576.1| unknown [Dendroctonus ponderosae]
Length = 411
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/291 (69%), Positives = 248/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAFLGYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSKRHRGKVKAFPKDDPSKPVHLTAFLGYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGV+GY++TP GLRSL TVWA+HL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTILETPPMIVVGVIGYIETPHGLRSLCTVWAEHLAEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSK+KAF+ + ++ GKK+I+ Q KI KY S VRV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKSKRKAFSSNATKWHDALGKKAIEKQFNKIIKYCSAVRVIAHTQMKLLK-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTIA+KV +A EK IPV+ VF +DE+ID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQINGGTIADKVAWAKEHLEKPIPVNQVFGQDEVIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAG 290
>gi|388583632|gb|EIM23933.1| 60S ribosomal protein L3 [Wallemia sebi CBS 633.66]
Length = 391
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/305 (66%), Positives = 252/305 (82%), Gaps = 5/305 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAAR--HRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR 78
MSHRK+E PRHGSLGFLPRKR RGK K+FPKDD KP LT +GYKAGMTH+VR
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRCTNVGARGKCKSFPKDDAKKPVHLTGLIGYKAGMTHVVR 60
Query: 79 DVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF 138
D+++PGSK+HK+E E VTI+ETPPM VVGVVGYV+TPRGLRSL TVWA+HLS+E++RRF
Sbjct: 61 DLDRPGSKMHKREVVEPVTIVETPPMAVVGVVGYVETPRGLRSLTTVWAEHLSDELKRRF 120
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
YKNW +SKKKAFTKY+K++ + G SI ++E+IKKY VVRVLAHTQ+ K LKQKK
Sbjct: 121 YKNWYRSKKKAFTKYAKKHSENSGA-SITREIERIKKYCQVVRVLAHTQVSKT-SLKQKK 178
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AHLMEIQVNGG++++KVD+A FEK + +VF++DE+ID IG+TKG+GYEGV RW V
Sbjct: 179 AHLMEIQVNGGSVSDKVDFAKSHFEKTVSASSVFEQDEVIDAIGITKGRGYEGVTKRWNV 238
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
TRLPRKTH+GLRKVACIGAWHP+ V F+VAR+GQ+G+HHRTE+NKKVY++G ++ +
Sbjct: 239 TRLPRKTHKGLRKVACIGAWHPSNVMFSVARSGQDGFHHRTELNKKVYRIG-SAEDKNNA 297
Query: 319 ITEFD 323
TEFD
Sbjct: 298 STEFD 302
>gi|296812079|ref|XP_002846377.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480]
gi|238841633|gb|EEQ31295.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480]
Length = 458
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/304 (68%), Positives = 251/304 (82%), Gaps = 8/304 (2%)
Query: 23 HRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEK 82
HRK+E PRHGSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+E+
Sbjct: 68 HRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLER 127
Query: 83 PGSKLHKKETCEAVTIIETPP---MMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
PG+K+H+KE EAVTI+ETPP M+ VG+VGY++TPRGLRSL TVWA HLS+EV+RRFY
Sbjct: 128 PGAKMHRKEVVEAVTIVETPPREQMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFY 187
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
KNW KSKKKAFT+Y+K T + +LE+IK Y +VVR+LAHTQIRK LKQKKA
Sbjct: 188 KNWYKSKKKAFTRYAK---THADAAATTRELERIKNYCTVVRLLAHTQIRKTP-LKQKKA 243
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
HLME+QVNGG+IAEKV++A+G FEK I VD VF+KDE++D+I VTKG G+ GV +RWG
Sbjct: 244 HLMEVQVNGGSIAEKVEFAHGLFEKPIDVDTVFEKDEVVDVIAVTKGHGFSGVTSRWGTK 303
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
+LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y++GK G E +
Sbjct: 304 KLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKAGDEGNAS- 362
Query: 320 TEFD 323
T+FD
Sbjct: 363 TDFD 366
>gi|327272509|ref|XP_003221027.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis]
Length = 403
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/293 (71%), Positives = 256/293 (87%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM++VG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVETPRGLRTFRTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R M L+QKK+H
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFNSMKKYCQVIRVIAHTQMR-MLPLRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEKVD+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVDWARAKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G Q
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQ 292
>gi|430813862|emb|CCJ28827.1| unnamed protein product [Pneumocystis jirovecii]
Length = 402
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 257/303 (84%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP LTAF+GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRASRHRGKVKSFPKDDPKKPIHLTAFMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+ LHKKE EAVT+IETPP++VVGVVGYV+TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGTILHKKEIVEAVTVIETPPLVVVGVVGYVETPRGLRSLTTVWAEHLSDEMKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT+YSK+Y E K I +LE+IKKY +VVR++ HTQIRK+ QKKAH
Sbjct: 121 NWYKSKKKAFTRYSKKYS--ETSKPIARELERIKKYCTVVRIIVHTQIRKIP-FGQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NG T+ +KVD+A FEK + V +VF++DEMID+IGVTKGKGYEGV TRWG R
Sbjct: 178 VMEIQLNGETVDKKVDWARDHFEKTVDVKSVFEQDEMIDVIGVTKGKGYEGVTTRWGTRR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N K+Y++G G + T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKIYRIG-SGDDPRNAST 296
Query: 321 EFD 323
+FD
Sbjct: 297 DFD 299
>gi|302307578|ref|NP_984302.2| 60S ribosomal protein L3 [Ashbya gossypii ATCC 10895]
gi|442570009|sp|Q759R7.2|RL3_ASHGO RecName: Full=60S ribosomal protein L3
gi|299789066|gb|AAS52126.2| ADR206Wp [Ashbya gossypii ATCC 10895]
gi|374107517|gb|AEY96425.1| FADR206Wp [Ashbya gossypii FDAG1]
Length = 387
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 256/303 (84%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA RG+VKAFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAV++++TPPM+VVGVVGY++TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D +I+ +L +IKKYASVVRVLAHTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--AIERELARIKKYASVVRVLAHTQVRKTP-LVQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+++EKVD+A FEK + VD+VF+++EMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KVY++GKGG E + T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGNAA-T 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|19115692|ref|NP_594780.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-]
gi|548771|sp|P36584.2|RL3B_SCHPO RecName: Full=60S ribosomal protein L3-B
gi|5059|emb|CAA40901.1| ribosomal protein L3 [Schizosaccharomyces pombe]
gi|13810236|emb|CAC37425.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe]
Length = 388
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/303 (71%), Positives = 255/303 (84%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFE PRHGSLGFLPRKRA+R RGKVKAFPKDD SKP LTAFLGYKAGMTHIVRD+
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVTIIETPPM+VVGVVGYV+TPRGLRSL TVWA+HLSEEV+RRFYK
Sbjct: 61 DRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+Y E +SI +LE+IKKY SVVRVLAHTQIRK L QKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KV++A FEK + + + F+++EMID+IGVT+GKG EG RWG R
Sbjct: 178 LMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N K+Y++G G ++ T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNAST 296
Query: 321 EFD 323
+FD
Sbjct: 297 DFD 299
>gi|268306352|gb|ACY95297.1| ribosomal protein L3 [Manduca sexta]
Length = 414
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/291 (69%), Positives = 250/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFP+DD SKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPRDDASKPVHLTAFIGYKAGMTHVVREP 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTIIETPPM+ VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW K KKKAFTK SK+++ + G+KSI+ +K+ +Y SVVR++AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRIIAHTQMKLLK-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI +KV +A EK IP+D+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|109100340|ref|XP_001106805.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Macaca mulatta]
Length = 403
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/291 (69%), Positives = 248/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR +RH GKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRRSRHHGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+E PPM+VVG+ GYV+TPRGLR+ TV+A+H+ +E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVEMPPMVVVGIAGYVETPRGLRTFKTVFAEHMGDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSTKKYGQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV + W +
Sbjct: 180 LTEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSHWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|342356437|gb|AEL28877.1| ribosomal protein L3 [Heliconius melpomene cythera]
Length = 412
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/291 (69%), Positives = 249/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDD SKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREP 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT+IETPPM+ VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTVIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW K KKKAFTK SK+++ + G+KSI+ +K+ +Y SVVRV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKSSKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLK-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGG I +KV +A EK IPVD+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGNIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|19114383|ref|NP_593471.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-]
gi|730556|sp|P40372.2|RL3A_SCHPO RecName: Full=60S ribosomal protein L3-A
gi|508856|gb|AAA19655.1| ribosomal protein L3 [Schizosaccharomyces pombe]
gi|2370475|emb|CAB11503.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe]
Length = 388
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/303 (71%), Positives = 255/303 (84%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFE PRHGSLGFLPRKRA+R RGKVKAFPKDD SKP LTAFLGYKAGMTHIVRD+
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT+IETPPM+VVGVVGYV+TPRGLRSL TVWA+HLSEEV+RRFYK
Sbjct: 61 DRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+Y E +SI +LE+IKKY SVVRVLAHTQIRK L QKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KV++A FEK + + + F+++EMID+IGVT+GKG EG RWG R
Sbjct: 178 LMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N K+Y++G G ++ T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNAST 296
Query: 321 EFD 323
+FD
Sbjct: 297 DFD 299
>gi|357017575|gb|AET50816.1| hypothetical protein [Eimeria tenella]
Length = 388
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/304 (68%), Positives = 251/304 (82%), Gaps = 7/304 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGF PRKR RHRGKVKAFPKDDPSKP LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSKLHKKE EAVTI+E+PPM+ VG+VGY++TP+GLR+L+TVWA HLSEE RRRFYK
Sbjct: 61 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKM-KGLKQKKA 199
NW KSKKKAFT+YSK+Y + +QA+++ IK++ +V+R + HTQ K GL +KA
Sbjct: 121 NWYKSKKKAFTRYSKKYAENN---KMQAEIDSIKQHCAVIRAICHTQPSKTPTGL--RKA 175
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+MEIQVNGGT+A+KVD+ FE +P+ AVF++DEM+D+IGVTKG G +GVV+R+GVT
Sbjct: 176 HIMEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVT 235
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
RLPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTEMNKKVY++G G + G
Sbjct: 236 RLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIG-SGSDPRNGS 294
Query: 320 TEFD 323
T+ D
Sbjct: 295 TDAD 298
>gi|318087096|gb|ADV40140.1| putative ribosomal protein L3 isoform A [Latrodectus hesperus]
Length = 303
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 197/291 (67%), Positives = 250/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF+P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSMGFVPKKRSKRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE E VTI+ETPPM++VGVVGY++TP+GLR+L TVWA+HLSE+ +RRFYK
Sbjct: 61 DKPGSKVNKKEVVEPVTILETPPMVIVGVVGYIETPKGLRALKTVWAEHLSEDCKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYSK++ + G+ +I +K+ KY V+RV+AHTQ++ M+ +QKKAH
Sbjct: 121 NWYKSKKKAFTKYSKKWAEEAGRVAINKDFKKMAKYCKVIRVIAHTQMKLMRK-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG I++K+ +A EK +P+ VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGNISQKIKWARDHLEKPVPLSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGQG 290
>gi|410965571|ref|XP_003989320.1| PREDICTED: 60S ribosomal protein L3 [Felis catus]
Length = 403
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/291 (71%), Positives = 256/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGYV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D+GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|344302517|gb|EGW32791.1| 60S ribosomal protein L3 [Spathaspora passalidarum NRRL Y-27907]
Length = 389
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 257/303 (84%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRASNQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPPM+VVGVVGYV+TPRGLRSL TVWA+HLSEEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D K ++ +L +IKKYASVVRVLAHTQI+K L QKKAH
Sbjct: 121 NWFKSKKKAFTKYSTKYAGDA--KQVETELARIKKYASVVRVLAHTQIKKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG++++KVD+A FEK++ V +VF+++EMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVSDKVDWAREHFEKEVSVSSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++G G ES+ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGSGADESN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|308490853|ref|XP_003107618.1| CRE-RPL-3 protein [Caenorhabditis remanei]
gi|308250487|gb|EFO94439.1| CRE-RPL-3 protein [Caenorhabditis remanei]
Length = 401
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/306 (66%), Positives = 251/306 (82%), Gaps = 4/306 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAV+IIETPPM++ GV GY+ TP+G R+L T+WA+HLSEE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+++ ++GKK I+A K+KKY S +RV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+EIQVNGGTI +KVD+A EKQI VD VF +DEMID IGVTKG G++GV +RW +
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHT 317
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N K+YK+GK + +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYKIGKSALTEEGKNN 299
Query: 318 GITEFD 323
G TEFD
Sbjct: 300 GSTEFD 305
>gi|237834163|ref|XP_002366379.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49]
gi|211964043|gb|EEA99238.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49]
gi|221486606|gb|EEE24867.1| 60S ribosomal protein L3, putative [Toxoplasma gondii GT1]
gi|221508362|gb|EEE33949.1| 60S ribosomal protein L3, putative [Toxoplasma gondii VEG]
Length = 389
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/303 (68%), Positives = 246/303 (81%), Gaps = 5/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR++
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHVVREL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EAVT+++TPPM+ VGVVGY++TPRGLR+L TVWA HLS+E +RRFYK
Sbjct: 61 DKPGSKLHKKEIVEAVTVVDTPPMVCVGVVGYIETPRGLRALVTVWAGHLSDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSK+KAFTKY+K+Y + ++A+L ++K Y SV+R + HTQ K + KKAH
Sbjct: 121 NWYKSKRKAFTKYAKRYGDNN---KMEAELTRMKNYCSVIRAICHTQPSKTP-IGSKKAH 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGG+IAEKVD+ FE +PV AVF + EMID+IGVTKG G +GVV+RWGVTR
Sbjct: 177 VMEIQVNGGSIAEKVDFCTKMFETAVPVKAVFTEGEMIDVIGVTKGHGVKGVVSRWGVTR 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRK+ACIGAWHPARV F V R GQ GY HRTEMNKKVY++G G + T
Sbjct: 237 LPRKTHRGLRKIACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRVGNGA-DPRNATT 295
Query: 321 EFD 323
E D
Sbjct: 296 ESD 298
>gi|402244317|emb|CBW52776.1| 40S ribosomal protein L3 [Polytomella sp. Pringsheim 198.80]
Length = 384
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/303 (71%), Positives = 254/303 (83%), Gaps = 5/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPR GSLGF PRKR R RGKVK+FP+DD +KP LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRCGSLGFSPRKRCRRGRGKVKSFPRDDSAKPAHLTAFIGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIE P M+VVGVVGY+KT RGLRSLN VWAQHLS++++R+FYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIECPAMVVVGVVGYIKTTRGLRSLNAVWAQHLSDDLKRKFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKK AF Y+K+Y +GKK I+A+L ++KK+ SV+RVLAHTQ+RK+ QKK
Sbjct: 121 NWYKSKKAAFKNYAKKY---DGKK-IEAELAQLKKHCSVIRVLAHTQVRKLH-WGQKKPQ 175
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+EIQVNGG+I++KVD+ Y FEK++ VDAVFQ +E ID I +TKG G +GVV RWGVTR
Sbjct: 176 LIEIQVNGGSISDKVDFGYKLFEKEVTVDAVFQTNEQIDTIAITKGHGVQGVVQRWGVTR 235
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ G+ HRTEMNKK+YK+GK SH+ T
Sbjct: 236 LPRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFFHRTEMNKKIYKIGKKDTASHSAST 295
Query: 321 EFD 323
+FD
Sbjct: 296 DFD 298
>gi|115725235|ref|XP_791350.2| PREDICTED: 60S ribosomal protein L3-like [Strongylocentrotus
purpuratus]
Length = 404
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/291 (69%), Positives = 247/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGK KAFPKDD SKP LT FLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKAFPKDDKSKPVHLTCFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAV+I+ETPPM++VG+VGY++TP GLR+L TVWA+HLS+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVSILETPPMIIVGLVGYIETPSGLRALKTVWAEHLSDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFTK SK++ + GKK I+ L +KKY +V+RV+AHTQ++ M +QKKAH
Sbjct: 121 NWYRSKKKAFTKSSKKWADEMGKKEIEKDLNIMKKYCTVIRVIAHTQMKLM-NQRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +K+++A EK IPV VF +DE+IDIIGVTKG G++GV +RWG +
Sbjct: 180 VMEIQLNGGSIGDKIEWARERLEKNIPVSEVFGQDELIDIIGVTKGHGFKGVTSRWGTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV + VARAGQ GYHHRTE+NKKVY++GKG
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYGVARAGQKGYHHRTEINKKVYRVGKG 290
>gi|225711234|gb|ACO11463.1| 60S ribosomal protein L3 [Caligus rogercresseyi]
Length = 408
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/309 (65%), Positives = 253/309 (81%), Gaps = 7/309 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGK KAFPKDDPSKP LT FLGYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKAKAFPKDDPSKPVHLTCFLGYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSKL+KKE EAVT++ETPPM+ +GVVGY++TPRGLR+L TVWA+H+ EE +RRFYK
Sbjct: 61 DRPGSKLNKKEIVEAVTVVETPPMVAIGVVGYIETPRGLRALKTVWAEHIGEEAKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK K++E D GKK I+ L++I KY+SVVR++ HTQ +K+ +QKKAH
Sbjct: 121 NWSKSKKKAFTKACKKWEDDLGKKEIEVDLKQIAKYSSVVRLICHTQ-QKLLKRRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV++A FEK+IP+ +VF KDEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSILDKVNFAREHFEKEIPIRSVFTKDEMIDTIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI- 319
LPRKTH+GLRKVACIGAWHP+R+ FTVARAGQ GYHHRTE+NKK+Y + +G + I
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRIQFTVARAGQKGYHHRTEINKKIYDIRRGFHTENGKIV 299
Query: 320 -----TEFD 323
TE+D
Sbjct: 300 KNNASTEYD 308
>gi|402876884|ref|XP_003902181.1| PREDICTED: 60S ribosomal protein L3-like, partial [Papio anubis]
Length = 279
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/280 (71%), Positives = 245/280 (87%), Gaps = 1/280 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE 300
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYH RTE
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHLRTE 279
>gi|121543847|gb|ABM55588.1| putative ribosomal protein L3 [Maconellicoccus hirsutus]
Length = 406
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 246/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KRA RHRG+VK+FPKDDPSKP LT FLGYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRARRHRGRVKSFPKDDPSKPVHLTTFLGYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTIIETPPM++VGVVGY++TP GL++L+TVWA+HLSE+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEPVTIIETPPMVIVGVVGYIETPHGLKALSTVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW K+KK+AFTK SK+++ G+K+I +L KI KY VVRV+AHTQ++ +K +QKK+H
Sbjct: 121 NWYKAKKRAFTKASKKWQDPLGRKAIDKELAKISKYCKVVRVIAHTQMKLLK-FRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGT+ EKV +A FEK +PV VF +DEMID I VTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGTVPEKVQWAKAHFEKAVPVSHVFAQDEMIDCIAVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|268564071|ref|XP_002647082.1| C. briggsae CBR-RPL-3 protein [Caenorhabditis briggsae]
gi|60393717|sp|Q9NBK4.2|RL3_CAEBR RecName: Full=60S ribosomal protein L3
Length = 401
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/306 (65%), Positives = 251/306 (82%), Gaps = 4/306 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAV+IIETPPM++ GV GY+ TP+G R+L T+WA+HLSEE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+++ ++GKK I+A K+KKY S +RV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+EIQ+NGGTI +KVD+A EKQI VD VF +DEMID IGVTKG G++GV +RW +
Sbjct: 180 LVEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHT 317
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N K+Y++GK + +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNN 299
Query: 318 GITEFD 323
G TEFD
Sbjct: 300 GSTEFD 305
>gi|84095076|dbj|BAE66653.1| ribosomal protein L3 [Papilio xuthus]
Length = 412
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/291 (69%), Positives = 249/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ R RGKVKAFPKDDP+KP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRSRGKVKAFPKDDPNKPVHLTAFIGYKAGMTHVVREP 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTIIETPPM+ VG VGY++TP GLR+L TVWA+H+SE+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGAVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW K KKKAFTK SK+++ + G+KSI+ +K+ +Y SV+RV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGQKSIEKDFKKMIRYCSVIRVIAHTQMKLLK-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTI +KV +A EK IPVD+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|387018308|gb|AFJ51272.1| 60S ribosomal protein L3-like [Crotalus adamanteus]
Length = 403
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/293 (70%), Positives = 257/293 (87%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKD+PS+P LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDNPSQPIHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ GSK++KKE EAVT++ETPPM++VG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRVGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +EGKK ++ +KKY V+RV+AHTQ+R M L+QKK+H
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVIAHTQMR-MLPLRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEKV++A G E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVEWARGKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G Q
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQ 292
>gi|187607061|ref|NP_001120075.1| ribosomal protein L3 [Xenopus (Silurana) tropicalis]
gi|165970448|gb|AAI58280.1| LOC100145083 protein [Xenopus (Silurana) tropicalis]
gi|165971389|gb|AAI58514.1| LOC100145083 protein [Xenopus (Silurana) tropicalis]
Length = 403
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 254/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSKRHRGKVKSFPKDDQSKPIHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM++VG+VGYV+TPRGLRSL T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRSLKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ DEGKK ++ +KKY V+RV+AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEKVD+A E+Q+ + VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVDWAREKLEQQVAITGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|401409462|ref|XP_003884179.1| 60S ribosomal protein L3, related [Neospora caninum Liverpool]
gi|325118597|emb|CBZ54148.1| 60S ribosomal protein L3, related [Neospora caninum Liverpool]
Length = 398
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/303 (67%), Positives = 246/303 (81%), Gaps = 5/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR++
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHVVREL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EAVT+++TPPM+ VGVVGY++TPRGLR+L TVWA HLS+E +RRFYK
Sbjct: 61 DKPGSKLHKKEIVEAVTVVDTPPMVCVGVVGYIETPRGLRALVTVWAGHLSDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSK+KAFTKY+K+Y + ++A+L ++K Y SV+R + HTQ K + KKAH
Sbjct: 121 NWYKSKRKAFTKYAKRYGDNN---KMEAELTRMKNYCSVIRAICHTQPSKTP-IGSKKAH 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGG++AEKVD+ FE +PV AVF + EM+D+IGVTKG G +GVV+RWGVTR
Sbjct: 177 VMEIQVNGGSVAEKVDFCTKMFETAVPVKAVFTEGEMLDVIGVTKGHGVKGVVSRWGVTR 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRK+ACIGAWHPARV F V R GQ GY HRTEMNKKVY++G G + T
Sbjct: 237 LPRKTHRGLRKIACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRVGNGA-DPRNATT 295
Query: 321 EFD 323
E D
Sbjct: 296 ESD 298
>gi|389611151|dbj|BAM19187.1| ribosomal protein L3 [Papilio polytes]
Length = 412
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/291 (69%), Positives = 249/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ R RGKVKAFPKDD +KP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRSRGKVKAFPKDDQNKPVHLTAFIGYKAGMTHVVREP 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTIIETPPM+ VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW K KKKAFTK SK+++ + G+KSI+ +K+ +Y SV+RV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGQKSIEKDFKKMIRYCSVIRVIAHTQMKLLK-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI +KV +A EK IPVD+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGTIEDKVKWAREHLEKPIPVDSVFTQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|341889604|gb|EGT45539.1| CBN-RPL-3 protein [Caenorhabditis brenneri]
Length = 401
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/306 (65%), Positives = 251/306 (82%), Gaps = 4/306 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVTI+ETPPM++ GV GY+ TP+G R+L T+WA+HLSEE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+++ ++GKK I++ K+KKY S +RV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIESDFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+EIQVNGGTI +KVD+A EKQI VD VF +DEMID IGVT+G G++GV +RW +
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTRGHGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHT 317
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N K+Y++GK + +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNN 299
Query: 318 GITEFD 323
G TEFD
Sbjct: 300 GSTEFD 305
>gi|307107912|gb|EFN56153.1| hypothetical protein CHLNCDRAFT_35097 [Chlorella variabilis]
Length = 386
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/303 (72%), Positives = 260/303 (85%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLP+KR R +GKVK+FPKDD +KP LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEAPRHGSLGFLPKKRCKRGKGKVKSFPKDDQTKPPHLTAFMGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKE EAVTIIETPPM+VVG+VGYVKT RG+RSLNTVWA+HLSEEV+RRFYK
Sbjct: 61 EKPGSKLHKKEAAEAVTIIETPPMVVVGIVGYVKTTRGMRSLNTVWAEHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTKY K+Y +GKK ++A++ ++KK+ V+RVLAHTQIRK+ + QKKAH
Sbjct: 121 SWYKSKKKAFTKYVKKYA--DGKKEVEAEVAELKKHCCVIRVLAHTQIRKVP-VGQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A KVD+AYG EK + V+ VF + EM+D I +TKG G EGVVTRWGV+R
Sbjct: 178 LMEIQVNGGSVAAKVDFAYGLLEKAVSVNTVFNQSEMVDAIAITKGHGTEGVVTRWGVSR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARV +TVAR+G G++HRTEMNKKVY++G G+ESH T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPARVGWTVARSGAMGFNHRTEMNKKVYRIGVKGEESHAATT 297
Query: 321 EFD 323
E D
Sbjct: 298 EHD 300
>gi|67540064|ref|XP_663806.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4]
gi|40738798|gb|EAA57988.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4]
Length = 447
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/292 (69%), Positives = 246/292 (84%), Gaps = 3/292 (1%)
Query: 32 GSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 91
GSL +LPRKRAARHRG+VK+FPKDDP KP LTA +GYKAGMT +VRD+++PG+K+HKKE
Sbjct: 67 GSLAYLPRKRAARHRGRVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDLDRPGAKMHKKE 126
Query: 92 TCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFT 151
EA T+IETPP++ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYKNW KSKKKAFT
Sbjct: 127 IVEAATVIETPPLIAVGVVGYIETPRGLRSLATVWAEHLSDEVKRRFYKNWYKSKKKAFT 186
Query: 152 KYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTI 211
KY+K++ + G SI LE+IKKY +VVRVLAHTQIRK LKQKKAHLMEIQVNGG++
Sbjct: 187 KYAKKHSEENG-ASITRDLERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQVNGGSV 244
Query: 212 AEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 271
AEKVD+A FEK I +D +F+KDEMID+I VTKG G++GV +RWG +LPRKTH+GLRK
Sbjct: 245 AEKVDFARNLFEKPIEIDTIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRK 304
Query: 272 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
VACIGAWHP+ V +TVARAGQ GYHHRT N KV+++GKG E++ T+FD
Sbjct: 305 VACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEANAS-TDFD 355
>gi|198435984|ref|XP_002132034.1| PREDICTED: similar to ribosomal protein L3 [Ciona intestinalis]
Length = 411
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 196/291 (67%), Positives = 246/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVKAFP+DDPSKPC LTAF+ YKAGMTH+VR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKAFPRDDPSKPCHLTAFISYKAGMTHVVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE +AVTI+E PPM+VVGV+GY++TPRGLR+L T++A+HLS+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVDAVTILEAPPMIVVGVIGYIETPRGLRTLKTLFAEHLSDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KKKAFTK ++++ +EGK+ I ++KKY V+RV+AHTQ+ K+ + QKK+H
Sbjct: 121 NWYACKKKAFTKSCRKWQDEEGKRQIDRDFNQMKKYCKVIRVIAHTQM-KLLPITQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI EKVDYA EK +PV +F KDEMIDIIGV KG G +GV +RW +
Sbjct: 180 IMEIQVNGGTIPEKVDYARDLLEKPVPVSNIFAKDEMIDIIGVNKGHGEKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV+++VAR+GQ GYHHRTE+NKK+Y+LG G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAYSVARSGQKGYHHRTEVNKKIYRLGAG 290
>gi|71984538|ref|NP_001021254.1| Protein RPL-3, isoform a [Caenorhabditis elegans]
gi|1710557|sp|P50880.1|RL3_CAEEL RecName: Full=60S ribosomal protein L3
gi|1181129|emb|CAA93269.1| ribosomal protein L3 [Caenorhabditis elegans]
gi|1181131|emb|CAA93268.1| ribosomal protein L3 [Caenorhabditis elegans]
gi|3875827|emb|CAA90183.1| Protein RPL-3, isoform a [Caenorhabditis elegans]
Length = 401
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/306 (65%), Positives = 251/306 (82%), Gaps = 4/306 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVTI+ETPPM++ GV GYV TP+G R+L T+WA+HLSEE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+++ ++GKK I+A K+KKY S +RV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+EIQVNGGTI +KVD+A EKQ+ VD VF +DEMID IGVT+G G++GV +RW +
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHT 317
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N K+Y++GK + +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNN 299
Query: 318 GITEFD 323
G TEFD
Sbjct: 300 GSTEFD 305
>gi|302697183|ref|XP_003038270.1| 60S ribosomal protein L3 [Schizophyllum commune H4-8]
gi|300111967|gb|EFJ03368.1| hypothetical protein SCHCODRAFT_80517 [Schizophyllum commune H4-8]
Length = 421
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/313 (67%), Positives = 263/313 (84%), Gaps = 3/313 (0%)
Query: 11 SVAAAAQRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYK 70
V A A + ++E PRHGSLGFLPRKRAARHRGKVK+FPKDDP KP LTAF+GYK
Sbjct: 24 DVLAIAADVKTPQDEYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAFMGYK 83
Query: 71 AGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHL 130
AGMTH+VRD+++PGSK+HK+E EAVTI+ETPP+MVVGVVGYV+TPRGLR+L TVWA HL
Sbjct: 84 AGMTHVVRDLDRPGSKMHKREVVEAVTIVETPPVMVVGVVGYVETPRGLRALTTVWASHL 143
Query: 131 SEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRK 190
S+EVRRRFYKNW +SKKKAFT+Y+K+ ++G K I +LE+I+KY +VVRVLAHTQIRK
Sbjct: 144 SDEVRRRFYKNWYRSKKKAFTRYAKKASENDG-KLISRELERIRKYCTVVRVLAHTQIRK 202
Query: 191 MKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYE 250
GL QKKAHLMEIQVNGG++A+KV++A+G FEK + + +VF++DE +DII VTKG G+E
Sbjct: 203 T-GLSQKKAHLMEIQVNGGSVADKVEFAHGLFEKPVEIGSVFEQDECVDIIAVTKGHGFE 261
Query: 251 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
GV RWG +LPRKTH+GLRKVACIGAWHP++V ++VARAGQNGYHHRTE+NKK+Y++G
Sbjct: 262 GVTHRWGTKKLPRKTHKGLRKVACIGAWHPSKVMYSVARAGQNGYHHRTEINKKIYRVGL 321
Query: 311 GGQESHTGITEFD 323
G + + TE D
Sbjct: 322 GSDDGNAS-TEHD 333
>gi|126136060|ref|XP_001384554.1| 60S ribosomal protein L3 [Scheffersomyces stipitis CBS 6054]
gi|126091752|gb|ABN66525.1| 60S large subunit ribosomal protein L3.e [Scheffersomyces stipitis
CBS 6054]
Length = 389
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/303 (70%), Positives = 257/303 (84%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA+H+G+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKHQGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPPM+VVGVVGYV+TPRGLRSL TVWA+HLSE+VRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEDVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D + ++ +L +IKKYASVVRVL HTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAQ--VERELARIKKYASVVRVLVHTQIKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG+IA+KVD+A FEK + V +VF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQVNGGSIADKVDFAKEHFEKTVSVSSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++G G ES +G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGTEGDES-SGAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|321458193|gb|EFX69265.1| hypothetical protein DAPPUDRAFT_301006 [Daphnia pulex]
Length = 416
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 197/291 (67%), Positives = 246/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR HRG+VK+FP DDP KP LTAFL YKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRCRSHRGRVKSFPHDDPKKPIHLTAFLAYKAGMTHIVREC 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVTI+ETPPM++VG+VGYV TP+GLR+L TVWA+H+ E+ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTILETPPMVIVGIVGYVATPKGLRALKTVWAEHIGEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK+++ D GKK I+ +L +K+Y V+RV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGKKVIEKELRAMKRYCKVIRVIAHTQMKLLRQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGT+ +KVD+A EK IP+ ++F +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 MMEIQVNGGTVRQKVDWARQHLEKTIPITSLFAQDEMIDVIGVTKGKGFKGVTSRWHTRK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTEMNKK+Y++GKG
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEMNKKIYRIGKG 290
>gi|148223643|ref|NP_001088030.1| ribosomal protein L3-like [Xenopus laevis]
gi|52221158|gb|AAH82692.1| LOC494722 protein [Xenopus laevis]
Length = 407
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 196/291 (67%), Positives = 248/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +PKDDPSKP LTAFLGYKAGMTH +R++
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPKDDPSKPVHLTAFLGYKAGMTHTLREI 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTIIETPP++VVG+VGYV+TPRGLRSL T++A+H+S+E +RRFY+
Sbjct: 61 HRPGLKISKREEVEAVTIIETPPLVVVGIVGYVETPRGLRSLKTIFAEHISDECKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKK+FTKY K+++ +EGKK ++ +KKY V+RV+ HTQ+ K+ L+QKKAH
Sbjct: 121 NWYKSKKKSFTKYCKKWQDEEGKKQLEKDFSAMKKYCKVIRVIIHTQM-KLLPLRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKVD+A+ EKQ+P++ VF +DEMID+IGVTKGKG GV +RW +
Sbjct: 180 VMEIQLNGGTVAEKVDWAHEKLEKQVPINTVFCQDEMIDVIGVTKGKGVRGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV++T+ARAGQ GYHHRTE+NKK+Y++GKG
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAYTIARAGQKGYHHRTEINKKIYRIGKG 290
>gi|148228673|ref|NP_001080341.1| ribosomal protein L3 [Xenopus laevis]
gi|27769202|gb|AAH42242.1| Rpl3-prov protein [Xenopus laevis]
Length = 403
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/291 (71%), Positives = 254/291 (87%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM++VG+VGYV+TPRGLRSL T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRSLKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEDGKKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGTIAEKVD+A E+Q+ + VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTIAEKVDWAREKLEQQVVIGGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|405959119|gb|EKC25184.1| 60S ribosomal protein L3, partial [Crassostrea gigas]
Length = 484
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 197/310 (63%), Positives = 255/310 (82%), Gaps = 7/310 (2%)
Query: 20 RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD 79
R SHRKF PRHGS FLP+KR+ RHRGK K+FPKDD SKPC LTAFLGYKAGMTHIVR+
Sbjct: 83 RQSHRKFSAPRHGSKAFLPKKRSRRHRGKCKSFPKDDKSKPCHLTAFLGYKAGMTHIVRE 142
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
V++PGSK +KKE EAVTI+ETPPMM+VGVVGY++TP+GLR+ T++A+HLSE+ RRRFY
Sbjct: 143 VDRPGSKSNKKEIVEAVTILETPPMMIVGVVGYIETPKGLRAFKTIFAEHLSEDCRRRFY 202
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
KNW ++KKKA+TKYSK+++ ++GKK I+ K+KKY V+RV+AHTQ++ +K +QKKA
Sbjct: 203 KNWYRAKKKAYTKYSKKWQDEDGKKEIERDFAKMKKYCKVIRVIAHTQMKLLKK-RQKKA 261
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+ME+QVNGGT+ +KVD+A EK +P++ VF +DE ID IGVT+G+G++GV +RW
Sbjct: 262 HIMEVQVNGGTVNQKVDWAREKLEKAVPIEQVFAQDENIDCIGVTRGRGFKGVTSRWHCK 321
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE----- 314
+LPRKTH+GLRKVACIGAWHP+RV F+VARAGQ GYHHRTE+NKK+Y++GKG
Sbjct: 322 KLPRKTHKGLRKVACIGAWHPSRVQFSVARAGQKGYHHRTEINKKIYRIGKGIHTKDGKV 381
Query: 315 -SHTGITEFD 323
+ G T++D
Sbjct: 382 IKNNGATDYD 391
>gi|325184995|emb|CCA19486.1| 60S ribosomal protein L3 putative [Albugo laibachii Nc14]
Length = 388
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/293 (68%), Positives = 245/293 (83%), Gaps = 4/293 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRKFE PRHG LGFLP+KR H+G+++ FP+DD +K LTAFL +KAGMTHI+R+V
Sbjct: 1 MGHRKFEAPRHGHLGFLPKKRTKHHQGRIRKFPRDDCNKAPHLTAFLAHKAGMTHIMREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PGSKLHKKE EAV+I+ETPPM++VGVVGY++TPRGLRSL TVWA+HLSEEV+RRFYK
Sbjct: 61 NQPGSKLHKKEIVEAVSILETPPMVIVGVVGYLETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSK+KAFTKY+K+Y I+ +L +IKKY VVRVLAH Q +K+ L+ KKAH
Sbjct: 121 NWYKSKRKAFTKYAKKYANSS---DIERELNRIKKYCQVVRVLAHDQPKKLH-LRIKKAH 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG++ +KVD+A FEKQ+PV AVF +DE+IDI G TKG G EGVVTRWGVTR
Sbjct: 177 IMEIQINGGSVPDKVDFAKSLFEKQVPVSAVFTQDELIDICGATKGHGIEGVVTRWGVTR 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTHRGLRKVACIGAWHP+RVS+TV RAGQ+GYHHRTE+NKK+Y++G G
Sbjct: 237 LPRKTHRGLRKVACIGAWHPSRVSYTVPRAGQHGYHHRTEINKKIYRIGAAGD 289
>gi|321477553|gb|EFX88511.1| hypothetical protein DAPPUDRAFT_206128 [Daphnia pulex]
Length = 412
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 197/291 (67%), Positives = 246/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR HRG+VK+FP DDP KP LTAFL YKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRCRSHRGRVKSFPHDDPKKPIHLTAFLAYKAGMTHIVREC 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVTI+ETPPM++VG+VGYV TP+GLR+L TVWA+H+ E+ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTILETPPMVIVGIVGYVATPKGLRALKTVWAEHIGEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK+++ D GKK I+ +L +K+Y V+RV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGKKVIEKELRAMKRYCKVIRVIAHTQMKLLRQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI +KVD+A EK IP+ ++F +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 MMEIQVNGGTIRQKVDWARQHLEKTIPITSLFAQDEMIDVIGVTKGKGFKGVTSRWHTRK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTEMNKK+Y++GKG
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQYTVARAGQKGYHHRTEMNKKIYRIGKG 290
>gi|115383888|ref|XP_001208491.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624]
gi|114196183|gb|EAU37883.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624]
Length = 395
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/292 (69%), Positives = 247/292 (84%), Gaps = 3/292 (1%)
Query: 32 GSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 91
GSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+++PG+K+HKKE
Sbjct: 15 GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDLDRPGAKMHKKE 74
Query: 92 TCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFT 151
EAVTI+ETPP++ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYKNW KSKKKAFT
Sbjct: 75 IVEAVTIVETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFT 134
Query: 152 KYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTI 211
KY+K++ DE +I +LE+IKKY +VVRVLAHTQ+RK LKQKKAHLMEIQVNGG++
Sbjct: 135 KYAKKH-ADENGSAITRELERIKKYCTVVRVLAHTQVRKTP-LKQKKAHLMEIQVNGGSV 192
Query: 212 AEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 271
A+KVD+A FEK I +D++F+KDEMID+I VTKG G++GV +RWG +LPRKTH+GLRK
Sbjct: 193 ADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRK 252
Query: 272 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
VACIGAWHP V +TVARAGQ GYHHRT N KV+++GKG E + T+FD
Sbjct: 253 VACIGAWHPNHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEGNAS-TDFD 303
>gi|347964|gb|AAA91344.1| TARBP-b, partial [Homo sapiens]
Length = 277
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/278 (71%), Positives = 242/278 (87%), Gaps = 1/278 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR +RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRTSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR 298
LPRKTHRGLRKVACIGAWHP RV+F+VARAGQ GYHHR
Sbjct: 240 LPRKTHRGLRKVACIGAWHPVRVAFSVARAGQKGYHHR 277
>gi|426354155|ref|XP_004044533.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Gorilla gorilla
gorilla]
Length = 403
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 247/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDP KP LTAFLGYKAGMTHI+R+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPYKPVHLTAFLGYKAGMTHIMREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++P SK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S E +RRFYK
Sbjct: 61 DRPASKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISNECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++ KK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDVKKQLEEDFSSMKKYCHVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+ E+Q+ V+ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWVRERLEQQVNVNQVFGQDEMIDVIGVTKGNGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LP KTHRGLRKVACIGAWHPARV+F+VARAGQ G HRTE+NKK+YK+G+G
Sbjct: 240 LPLKTHRGLRKVACIGAWHPARVAFSVARAGQKGNRHRTEINKKIYKIGQG 290
>gi|71896067|ref|NP_001025612.1| ribosomal protein L3-like [Xenopus (Silurana) tropicalis]
gi|60688143|gb|AAH91070.1| MGC108366 protein [Xenopus (Silurana) tropicalis]
Length = 407
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 197/291 (67%), Positives = 249/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +PKDDPSKP LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+ G K+ K+E EAVTIIETPP++VVG+VGYV+TPRGLRSL T++A+H+S+E +RRFY+
Sbjct: 61 HRTGLKISKREEVEAVTIIETPPLVVVGIVGYVETPRGLRSLKTIFAEHISDECKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKK+FTKYSK+++ +EGKK ++ +KKY V+RV+ HTQ+ K+ L+QKKAH
Sbjct: 121 NWYKSKKKSFTKYSKKWQDEEGKKQLEKDFSAMKKYCKVIRVIVHTQM-KLLPLRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+A+KVD+A+ EKQ+PV++VF +DEMID+IGVTKGKG GV +RW +
Sbjct: 180 VMEIQLNGGTVADKVDWAHEKLEKQVPVNSVFGQDEMIDVIGVTKGKGVRGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV++T+ARAGQ GYHHRTE+NKK+Y++GKG
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAYTIARAGQKGYHHRTEINKKIYRIGKG 290
>gi|294867277|ref|XP_002765039.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239864919|gb|EEQ97756.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 385
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/295 (68%), Positives = 240/295 (81%), Gaps = 9/295 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR H+GKVK+FPKDD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKSFPKDDQSKPCHLTAFMGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLH+KE EAVT++E PPM+ VG VGYV+TP GLR+L TVWA+HLS+EVRRRFYK
Sbjct: 61 DKPGSKLHRKEVVEAVTVLEAPPMVCVGFVGYVETPNGLRALTTVWAKHLSDEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAF+KY +K A++++ KKY VVR + HTQ+ K+K L QKKAH
Sbjct: 121 NWYHSKKKAFSKYQ--------EKDHDAEVQRCKKYCQVVRAIMHTQVSKVK-LTQKKAH 171
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
++E+QVNGG++++KVD+ FEK++P+ +VF KDEM+DIIGVTKG G V TRWGVTR
Sbjct: 172 IVEVQVNGGSVSDKVDFCQSLFEKEVPISSVFDKDEMVDIIGVTKGHGNTSVTTRWGVTR 231
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES 315
L RKTHRGLRKVACIGAWHPARV F V RAGQ GYHHR E+NKK+Y++GK +E
Sbjct: 232 LARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYHHRVEINKKIYRIGKALRED 286
>gi|233957366|gb|ACQ91223.1| ribosomal protein L3 [Penaeus monodon]
Length = 406
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 244/291 (83%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR RHR +VK FPKDD SKP LTAFLGYKAGMTHIVR
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRCRRHRPRVKTFPKDDKSKPVHLTAFLGYKAGMTHIVRVA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK+++KE EAVTIIETPPM+ VGVVGY++TPRGLR L T+WA+HLSEE +RRFYK
Sbjct: 61 DKPGSKINRKEVLEAVTIIETPPMVCVGVVGYIQTPRGLRVLKTIWAEHLSEECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFT +++++ GKK I+ ++ K+KKY + +R++AHTQ+R ++ K KKAH
Sbjct: 121 NWHKSKKKAFTNAAQKWQDSLGKKMIKREIAKMKKYCTHIRIIAHTQVRILRK-KFKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT++EKVD+A FEKQIP+D+VF +DEMID+IGVTKGKG +GV +RWG +
Sbjct: 180 IMEIQLNGGTVSEKVDWAVNHFEKQIPIDSVFAQDEMIDVIGVTKGKGMKGVTSRWGTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP RV FTVARAGQ GYHHRTE KK+Y++GKG
Sbjct: 240 LPRKTHKGLRKVACIGAWHPTRVQFTVARAGQKGYHHRTERTKKIYRIGKG 290
>gi|50411414|ref|XP_457044.1| 60S ribosomal protein L3 [Debaryomyces hansenii CBS767]
gi|74659529|sp|Q6BXM5.1|RL3_DEBHA RecName: Full=60S ribosomal protein L3
gi|49652709|emb|CAG85030.1| DEHA2B01804p [Debaryomyces hansenii CBS767]
Length = 389
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 255/303 (84%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKR+A RG+VK+FPKD SKP LTAFLGYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLSEEVRRRFYK
Sbjct: 61 DRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D + ++ +L +IKKYASVVRVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAQ--VERELARIKKYASVVRVLAHTQIKKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG++++KVD+A FEK + VD+VF+KDEM+D+ VTKG G+EGV RWG +
Sbjct: 178 LAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N KVY++G G ES +G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDES-SGAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|294954638|ref|XP_002788244.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239903507|gb|EER20040.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 385
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/295 (68%), Positives = 240/295 (81%), Gaps = 9/295 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR H+GKVK+FPKDD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKSFPKDDQSKPCHLTAFMGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLH+KE EAVT++E PPM+ VG VGYV+TP GLR+L TVWA+HLS+EVRRRFYK
Sbjct: 61 DKPGSKLHRKEVVEAVTVLEAPPMVCVGFVGYVETPNGLRALTTVWAKHLSDEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAF+KY +K A++++ KKY VVR + HTQ+ K+K L QKKAH
Sbjct: 121 NWYHSKKKAFSKYQ--------EKDHDAEVQRCKKYCQVVRAIMHTQVSKVK-LTQKKAH 171
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
++E+QVNGG++++KVD+ FEK++P+ +VF KDEM+DIIGVTKG G V TRWGVTR
Sbjct: 172 IVEVQVNGGSVSDKVDFCQSLFEKEVPISSVFDKDEMVDIIGVTKGHGNTSVTTRWGVTR 231
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES 315
L RKTHRGLRKVACIGAWHPARV F V RAGQ GYHHR E+NKK+Y++GK +E
Sbjct: 232 LARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYHHRVEINKKIYRIGKALRED 286
>gi|225718854|gb|ACO15273.1| 60S ribosomal protein L3 [Caligus clemensi]
Length = 410
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/291 (68%), Positives = 245/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+K + RHRGK KAFPKDDPSKP LT FLGYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKCSKRHRGKAKAFPKDDPSKPVHLTCFLGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPP++ +GVVGY++TPRGLR+L TVWA+H+ EE +RRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIVETPPLVPIGVVGYIETPRGLRALKTVWAEHIGEEAKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK K++E D GKK I L++I KYASVVR++ HTQ + +K +QKKAH
Sbjct: 121 NWSKSKKKAFTKACKKWEDDLGKKEIDNDLKQISKYASVVRLICHTQQKLLK-RRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV++A FEK+IPV +VF KDEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSILDKVNFAREHFEKEIPVRSVFSKDEMIDTIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+R+ +TVARAGQ GYHHRTE+NKK+Y + +G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRIQYTVARAGQKGYHHRTEINKKIYDIRRG 290
>gi|213510850|ref|NP_001135078.1| 60S ribosomal protein L3 [Salmo salar]
gi|209731890|gb|ACI66814.1| 60S ribosomal protein L3 [Salmo salar]
gi|209738508|gb|ACI70123.1| 60S ribosomal protein L3 [Salmo salar]
gi|209738636|gb|ACI70187.1| 60S ribosomal protein L3 [Salmo salar]
gi|223646872|gb|ACN10194.1| 60S ribosomal protein L3 [Salmo salar]
gi|223672733|gb|ACN12548.1| 60S ribosomal protein L3 [Salmo salar]
Length = 403
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/291 (70%), Positives = 253/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGYV+TPRGLRS T++A+H+S+E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ DEGKK ++ +KKY VVR++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGG+I++KVD+A E+ IP+ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHP+RV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPSRVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|264667433|gb|ACY71302.1| ribosomal protein L3 [Chrysomela tremula]
Length = 414
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/291 (71%), Positives = 247/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+ YKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFISYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSKL+KKE EAVTI+E PPM+VVGVVGY++TP GLR+L TVWA+HLSE+ RRRFYK
Sbjct: 61 DRPGSKLNKKEIVEAVTILEAPPMVVVGVVGYIETPHGLRALATVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK++ D GKKSI+ +KI KY VVRV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWSDDLGKKSIEKDFKKIIKYCKVVRVIAHTQMKLLKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+IA+KV +A FEK IPV VF +DEMID IGVTKG GY+GV +RW +
Sbjct: 180 IMEIQLNGGSIADKVAWARAHFEKPIPVSEVFAQDEMIDCIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAG 290
>gi|209732474|gb|ACI67106.1| 60S ribosomal protein L3 [Salmo salar]
Length = 403
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/291 (70%), Positives = 253/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGYV+TPRGLRS T++A+H+S+E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ DEGKK ++ +KKY VVR++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGG+I++KVD+A E+ IP+ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHP+RV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPSRVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|309268181|ref|XP_001475783.2| PREDICTED: 60S ribosomal protein L3-like [Mus musculus]
Length = 403
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/291 (68%), Positives = 245/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KF PRHGSLGFLPRKR++RH GKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHGKFSAPRHGSLGFLPRKRSSRHPGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGS+++KKE EAVTI+E PPM+VVG+VGYV+ PRGLR+ TV+A+H+S E +RRFYK
Sbjct: 61 DRPGSEVNKKEVVEAVTIVENPPMVVVGIVGYVENPRGLRTFKTVFAEHISNECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AHTQ+ + L QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMHLLP-LCQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
MEI VNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 FMEIPVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYH+RTE+NKK+YK+ +G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHYRTEINKKIYKICQG 290
>gi|193580256|ref|XP_001951042.1| PREDICTED: 60S ribosomal protein L3-like [Acyrthosiphon pisum]
Length = 408
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 244/291 (83%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KRA RHRG+VK+FPKDDPSKP LTAF+ YKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRARRHRGRVKSFPKDDPSKPIHLTAFIAYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSKL+KKE E VTI+E PPM++VGVVGYV+TP GL+ L TV+A+HLSE+ RRRFYK
Sbjct: 61 DRPGSKLNKKEIVEPVTILEAPPMIIVGVVGYVETPYGLKPLKTVFAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAF KYS++++ + GK+ I L KI KY+ V+RV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKSKKKAFVKYSRKWQDENGKRQIAKDLGKIAKYSKVIRVVAHTQMKLLKK-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGT+AEKV +A FEK +PV VF DEMID IGVTKG+GY+GV +RW +
Sbjct: 180 IMEIQVNGGTVAEKVQWAKEHFEKPVPVSHVFAPDEMIDCIGVTKGRGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGLG 290
>gi|50549253|ref|XP_502097.1| 60S ribosomal protein L3 [Yarrowia lipolytica]
gi|49647964|emb|CAG82417.1| YALI0C21560p [Yarrowia lipolytica CLIB122]
Length = 387
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 251/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKR + RGK K+FPKDD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEQPRHGHLGFLPRKRCTKSRGKAKSFPKDDKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ GSK+ K+E EA T+++TPPM+VVGVVGYV TPRGLRSL TVWA+HLSEEVRRRFYK
Sbjct: 61 DRRGSKMDKREIVEAATVVDTPPMVVVGVVGYVATPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKK AFTKY+KQYE D + +Q +LE+IKKY +VVRVLAHTQ K+ LKQKKAH
Sbjct: 121 NWYKSKKTAFTKYAKQYEGDAAQ--VQKELERIKKYCTVVRVLAHTQP-KLTPLKQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG++A+KV++A FEK + +D VF++DEMID I +TKGKGYEG RWG +
Sbjct: 178 LAEIQINGGSVADKVEWAQQHFEKTVTIDTVFEQDEMIDAIAITKGKGYEGTTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVAR+GQ+GYHHRT N KVY++GKGG ES+ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQYTVARSGQDGYHHRTSANHKVYRVGKGGDESN-GST 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|302658162|ref|XP_003020788.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517]
gi|291184652|gb|EFE40170.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517]
Length = 565
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/292 (68%), Positives = 243/292 (83%), Gaps = 5/292 (1%)
Query: 32 GSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 91
GSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+E+PG+K+H+KE
Sbjct: 33 GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLERPGAKMHRKE 92
Query: 92 TCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFT 151
EAVTI+ETPPM+ VG+VGY++TPRGLRSL TVWA HLS+EV+RRFYKNW KSKKKAFT
Sbjct: 93 IVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFYKNWYKSKKKAFT 152
Query: 152 KYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTI 211
+Y+K T + +LE+IK Y +VVR+LAHTQIRK LKQKKAHLMEIQVNGG+I
Sbjct: 153 RYAK---THADAATTTRELERIKNYCTVVRLLAHTQIRKTP-LKQKKAHLMEIQVNGGSI 208
Query: 212 AEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 271
A+KV++A+G FEK I VD+VF+KDE++D+I VTKG G+ GV +RWG +LPRKTH+GLRK
Sbjct: 209 ADKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLPRKTHKGLRK 268
Query: 272 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
VACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y++GK E + TEFD
Sbjct: 269 VACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNAS-TEFD 319
>gi|358365675|dbj|GAA82297.1| 60S ribosomal protein L3 [Aspergillus kawachii IFO 4308]
Length = 389
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/291 (68%), Positives = 245/291 (84%), Gaps = 3/291 (1%)
Query: 33 SLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKET 92
SL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+++PG+K+HKKE
Sbjct: 10 SLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTVVRDLDRPGAKMHKKEV 69
Query: 93 CEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTK 152
EA T+IETPP++ VGVVGY++TPRGLRSL TVWA+HLS+EV+RRFYKNW KSKKKAFTK
Sbjct: 70 VEAATVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTK 129
Query: 153 YSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIA 212
Y+K++ + G SI +LE+IKKY +VVRVLAHTQ+RK LKQKKAHLMEIQVNGG++A
Sbjct: 130 YAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQVRKTP-LKQKKAHLMEIQVNGGSVA 187
Query: 213 EKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 272
+KVD+A FEK I +D++F+KDEMID+I VTKG G++GV +RWG +LPRKTH+GLRKV
Sbjct: 188 DKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKV 247
Query: 273 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
ACIGAWHP V +TVARAGQ GYHHRT N KV+++GKG E + T+FD
Sbjct: 248 ACIGAWHPNHVQWTVARAGQMGYHHRTSCNHKVFRVGKGSDEGNAS-TDFD 297
>gi|311334502|emb|CBN08632.1| small nucleolar RNA, C/D box 43 [Microcosmus squamiger]
Length = 404
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/291 (65%), Positives = 248/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR HRG+V++FP+DD +KPC LTAFL YKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRHHRGRVRSFPRDDKTKPCHLTAFLAYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPP++VVGV+GY++TPRGLR+LNT++A+HLS+E +RRFYK
Sbjct: 61 DRPGSKMNKKEVVEAVTILETPPIIVVGVIGYIQTPRGLRTLNTIFAEHLSDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +KKKAF+K +++ ++GK+ I K+KKY +V+RV+AH+Q+ K+ ++QKKAH
Sbjct: 121 NWYSAKKKAFSKACHKWQDEDGKQQIDQDFAKMKKYCTVIRVIAHSQM-KLLPVRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG+IA+KV+YA EK + V +F +DEMIDIIGVTKG GY+GV +RW +
Sbjct: 180 LMEIQINGGSIADKVEYARNLLEKPVKVADLFGQDEMIDIIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV+F+VAR+GQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARSGQKGYHHRTEINKKIYRVGVG 290
>gi|22203712|gb|AAM94270.1| ribosomal protein L3 [Azumapecten farreri]
Length = 396
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/292 (68%), Positives = 244/292 (83%), Gaps = 1/292 (0%)
Query: 20 RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD 79
R SHRKF PRHGS GFLP+KRA+RHRGKVKAFP DD SKP LTAF+GYKAGM+HIVRD
Sbjct: 1 RGSHRKFSAPRHGSKGFLPKKRASRHRGKVKAFPTDDKSKPVHLTAFIGYKAGMSHIVRD 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
V++PGSK +KKE EAVTIIETPPM++VG+VGY++TP GLRS T++A+HL+E+ RRRFY
Sbjct: 61 VDRPGSKSNKKEIVEAVTIIETPPMVIVGLVGYIETPNGLRSFKTIFAEHLNEDCRRRFY 120
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
KNW KKKAFTKY+K++ + GKK I+ +K+KKY V+RV+AHTQ + MK +QKKA
Sbjct: 121 KNWYNCKKKAFTKYAKKWTDESGKKEIERDFQKMKKYCKVIRVIAHTQTKLMKK-RQKKA 179
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+MEIQVNGGTIA+KVD+A E +PV +VF DE IDIIGVTKGKG +GV +RW
Sbjct: 180 HIMEIQVNGGTIAQKVDWAREKMESSVPVGSVFAMDENIDIIGVTKGKGVKGVTSRWHTK 239
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+N+K+Y++G+G
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINEKIYRMGEG 291
>gi|302502186|ref|XP_003013084.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371]
gi|291176646|gb|EFE32444.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371]
Length = 557
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/292 (68%), Positives = 243/292 (83%), Gaps = 5/292 (1%)
Query: 32 GSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 91
GSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+E+PG+K+H+KE
Sbjct: 33 GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLERPGAKMHRKE 92
Query: 92 TCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFT 151
EAVTI+ETPPM+ VG+VGY++TPRGLRSL TVWA HLS+EV+RRFYKNW KSKKKAFT
Sbjct: 93 IVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFYKNWYKSKKKAFT 152
Query: 152 KYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTI 211
+Y+K T S +LE+IK Y +VVR+LAHTQIRK LKQKKAHLMEIQVNGG+I
Sbjct: 153 RYAK---THADAASTTRELERIKNYCTVVRLLAHTQIRKTP-LKQKKAHLMEIQVNGGSI 208
Query: 212 AEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 271
A+KV++A+G FEK I VD+VF+KDE++D+I VTKG G+ GV +RWG +LPRKTH+GLRK
Sbjct: 209 ADKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLPRKTHKGLRK 268
Query: 272 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
VACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y++GK E + T+FD
Sbjct: 269 VACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNAS-TDFD 319
>gi|209734892|gb|ACI68315.1| 60S ribosomal protein L3 [Salmo salar]
gi|209738572|gb|ACI70155.1| 60S ribosomal protein L3 [Salmo salar]
Length = 403
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/291 (69%), Positives = 252/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGFLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGYV+TPRGLRS T++A+H+S+E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ DEGKK ++ +KKY VVR++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGG+I++KVD+A E+ IP+ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHP+RV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPSRVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|380474654|emb|CCF45659.1| 60S ribosomal protein L3 [Colletotrichum higginsianum]
Length = 391
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/292 (68%), Positives = 244/292 (83%), Gaps = 3/292 (1%)
Query: 32 GSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 91
GSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+++PG+K +KKE
Sbjct: 12 GSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKANKKE 71
Query: 92 TCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFT 151
EAV+II+TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+E+RRRFYKNW KSKKKAFT
Sbjct: 72 VVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIRRRFYKNWYKSKKKAFT 131
Query: 152 KYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTI 211
KY+KQ+ G SI ++E+IKKY +VVRVLAHTQIRK L QKKAHLMEIQVNGG+I
Sbjct: 132 KYAKQHSESSG-ASITREIERIKKYCTVVRVLAHTQIRKTP-LTQKKAHLMEIQVNGGSI 189
Query: 212 AEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 271
A+KVD+ YG FEK + +D++F+++EMID+I VT G GY GV +RWG +LPRKTH+GLRK
Sbjct: 190 ADKVDFGYGLFEKPVTIDSIFEQNEMIDVIAVTTGHGYNGVTSRWGTKKLPRKTHKGLRK 249
Query: 272 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
VACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GKG + + T+ D
Sbjct: 250 VACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADDNAS-TDVD 300
>gi|196000674|ref|XP_002110205.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588329|gb|EDV28371.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 399
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/295 (67%), Positives = 245/295 (83%), Gaps = 1/295 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR +HRGKVK+FPKDD +KPC LTAF+ YKAGMTH++R+ +
Sbjct: 8 SHRKFSAPRHGSLGFLPRKRTKKHRGKVKSFPKDDATKPCHLTAFMAYKAGMTHVLREPD 67
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPPM+VVGVVGY++TPRGLR+ TVWA+HL+EE +RRFYKN
Sbjct: 68 RPGSKMNKKEVVEAVTILETPPMVVVGVVGYIETPRGLRTYKTVWAEHLNEECKRRFYKN 127
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W +SKKKAFTK K+Y G ++I+ EK+KKY V+RV+AHTQIR + L+QKK+H+
Sbjct: 128 WYRSKKKAFTKSCKRYGDANGVQTIERDFEKMKKYCKVIRVIAHTQIR-LVALRQKKSHV 186
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGG I EKVDYA EK++P D VF +DEMIDIIG TKGKG+ GV RWG +L
Sbjct: 187 MEIQVNGGNIVEKVDYARALLEKEVPADTVFSQDEMIDIIGATKGKGFRGVTFRWGTKKL 246
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
PRKTH+GLRKVACIG+WHP+RV F++ARAGQ GYHHRTE+NKK+Y++G G E +
Sbjct: 247 PRKTHKGLRKVACIGSWHPSRVGFSIARAGQTGYHHRTEVNKKIYRIGSGKDEKN 301
>gi|307204449|gb|EFN83156.1| 60S ribosomal protein L3 [Harpegnathos saltator]
Length = 402
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 195/278 (70%), Positives = 244/278 (87%), Gaps = 1/278 (0%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTHIVR+ ++ GSK++KKE
Sbjct: 1 MGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHIVREADRQGSKINKKEIV 60
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
EAVTI+ETPPM+VVG+VGY++TP GLR+L+TVWA+HLSE+ RRRFYKNW KSKKKAFTK
Sbjct: 61 EAVTILETPPMIVVGIVGYIETPHGLRALSTVWAEHLSEDCRRRFYKNWYKSKKKAFTKA 120
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
SK+++ D G+KSI+A L+KIKKY SVVR++ HTQ++ ++ +QKKAH+ME+Q+NGGTI +
Sbjct: 121 SKKWQDDIGRKSIEADLKKIKKYCSVVRIITHTQMKLLRQ-RQKKAHIMEVQLNGGTIED 179
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
KV +A EK +PV +VF +DEMID+IGVTKGKGY+GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KVQWAREHLEKPVPVSSVFARDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
CIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 277
>gi|300121321|emb|CBK21701.2| unnamed protein product [Blastocystis hominis]
gi|300123206|emb|CBK24479.2| unnamed protein product [Blastocystis hominis]
gi|300176312|emb|CBK23623.2| unnamed protein product [Blastocystis hominis]
gi|300176758|emb|CBK25327.2| unnamed protein product [Blastocystis hominis]
Length = 387
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/303 (66%), Positives = 247/303 (81%), Gaps = 2/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG +GFLPRKR +RG V++FPKD + LTAF+GYKAGMTHIVR +
Sbjct: 1 MSHRKYECPRHGHMGFLPRKRCTHNRGHVRSFPKDKADQKPHLTAFMGYKAGMTHIVRVL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVTI+ETPPM+VVG+VGYV+TPRGLR+L TV+A+HL + +RRFYK
Sbjct: 61 DRPGSKAHKQEIVEAVTILETPPMVVVGIVGYVETPRGLRTLTTVFAEHLDDSCKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAFTKY+ + TDEGK++++ +L+KI Y VVRVLAHTQI+K+K + QKKAH
Sbjct: 121 NWYNSKKKAFTKYAARMATDEGKEAMEQKLKKIVDYCQVVRVLAHTQIQKLK-IGQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG + EKV +A EK++ V VF+ EMID IGVTKGKG+EGV TRWG TR
Sbjct: 180 LMEIQVNGGNMEEKVAFAKSLLEKEVKVSDVFEPSEMIDTIGVTKGKGFEGVTTRWGTTR 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP+RV FTV RAGQNGYHHRT++NKK+Y++G G ++ + T
Sbjct: 240 LPRKTHRGLRKVACIGAWHPSRVHFTVPRAGQNGYHHRTDVNKKIYRIGAAG-DAKSAST 298
Query: 321 EFD 323
E D
Sbjct: 299 EAD 301
>gi|448083090|ref|XP_004195305.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
gi|359376727|emb|CCE87309.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
Length = 389
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/303 (70%), Positives = 254/303 (83%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVSLTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLSEEV+RRFYK
Sbjct: 61 DRPGSKVHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D + ++ +L +IKKYASVVRVL HTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDATQ--VERELARIKKYASVVRVLVHTQIKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG+I++KVD+A FEK + VD+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V ++V RAGQNGYHHRT +N KVY++G G ES+ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWSVPRAGQNGYHHRTSINHKVYRVGSGEDESN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|40882439|gb|AAR96131.1| RH62603p [Drosophila melanogaster]
Length = 465
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/295 (67%), Positives = 243/295 (82%), Gaps = 1/295 (0%)
Query: 17 QRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHI 76
+R MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHI
Sbjct: 8 KRTDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHI 67
Query: 77 VRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRR 136
VR+ ++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RR
Sbjct: 68 VREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRR 127
Query: 137 RFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQ 196
RFYKNW KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +Q
Sbjct: 128 RFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQ 186
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
KKAH+MEIQ+NGG+I +KV +A EK I V VF +DEMID +GVTKGKG++GV +RW
Sbjct: 187 KKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRW 246
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 247 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 301
>gi|326475993|gb|EGE00003.1| 60S ribosomal protein L3 [Trichophyton tonsurans CBS 112818]
gi|326485021|gb|EGE09031.1| 60S ribosomal protein L3 [Trichophyton equinum CBS 127.97]
Length = 410
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/292 (67%), Positives = 243/292 (83%), Gaps = 5/292 (1%)
Query: 32 GSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 91
GSL +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+E+PG+K+H+KE
Sbjct: 32 GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLERPGAKMHRKE 91
Query: 92 TCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFT 151
EAVTI+ETPPM+ VG+VGY++TPRGLRSL TVWA HLS+EV+RRFYKNW KSKKKAFT
Sbjct: 92 IVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFYKNWYKSKKKAFT 151
Query: 152 KYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTI 211
+Y+K T + +LE+IK Y +VVR+LAHTQIRK LKQKKAHLMEIQVNGG++
Sbjct: 152 RYAK---THADAATTTRELERIKNYCTVVRLLAHTQIRKTP-LKQKKAHLMEIQVNGGSV 207
Query: 212 AEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 271
A+KV++A+G FEK I VD+VF+KDE++D+I VTKG G+ GV +RWG +LPRKTH+GLRK
Sbjct: 208 ADKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLPRKTHKGLRK 267
Query: 272 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
VACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y++GK E + T+FD
Sbjct: 268 VACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNAS-TDFD 318
>gi|197632293|gb|ACH70870.1| ribosomal protein L3 [Salmo salar]
Length = 403
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/291 (69%), Positives = 252/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGYV+TPRGLRS T++A+H+S+E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ DEGKK ++ +KKY VVR++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLP-LRQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGG+I++KVD+A E+ IP+ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWH +RV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHLSRVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|194743868|ref|XP_001954422.1| GF16740 [Drosophila ananassae]
gi|190627459|gb|EDV42983.1| GF16740 [Drosophila ananassae]
Length = 415
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 242/291 (83%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD KP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDAKKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV++A EK IPV VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 VMEIQLNGGSIEDKVNWARQHLEKPIPVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|164605513|dbj|BAF98579.1| ribosomal protein L3 [Solea senegalensis]
Length = 403
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/291 (70%), Positives = 251/291 (86%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGK K+FPKDDP+KP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPNKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPMMVVGVVGYV TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMMVVGVVGYVNTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D+GKK ++ +KKY +VRV+ HTQ+R + LKQK+AH
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDDGKKQLEKDFAAMKKYCQIVRVICHTQMRLLP-LKQKRAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGGTI++KVD+A E+ +P++ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGTISDKVDWAREKLEQAVPINTVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>gi|406701331|gb|EKD04480.1| large subunit ribosomal protein L3 [Trichosporon asahii var. asahii
CBS 8904]
Length = 388
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/303 (67%), Positives = 257/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PR GSL FLPRKRAA+HRG +K+FPKDDP KP LTA LGYKAGMTH+VRD+
Sbjct: 1 MSHRKYEEPRSGSLAFLPRKRAAKHRGHIKSFPKDDPKKPVHLTAMLGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT++ETPPM++VGVVGYV+TPRGLR+L TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVVETPPMVIVGVVGYVETPRGLRALTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ + G S+ +LE+IKKYA+VVRVLAHTQ+ + GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSENNG-ASVARELERIKKYATVVRVLAHTQLSQT-GLAQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG+IA+KV++A FEK V +VF+++E ID+I VTKG GY GV++RWGVT+
Sbjct: 179 LSEIQVNGGSIADKVEFAKANFEKTFDVKSVFEQNECIDVIAVTKGHGYSGVISRWGVTK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP++V F+VAR+GQ+GYH RT +N K+Y++ G E +G T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSKVMFSVARSGQDGYHRRTTINHKIYRIDNGTNEG-SGST 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|401882459|gb|EJT46717.1| large subunit ribosomal protein L3 [Trichosporon asahii var. asahii
CBS 2479]
Length = 381
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/303 (67%), Positives = 257/303 (84%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PR GSL FLPRKRAA+HRG +K+FPKDDP KP LTA LGYKAGMTH+VRD+
Sbjct: 1 MSHRKYEEPRSGSLAFLPRKRAAKHRGHIKSFPKDDPKKPVHLTAMLGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT++ETPPM++VGVVGYV+TPRGLR+L TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVVETPPMVIVGVVGYVETPRGLRALTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K++ + G S+ +LE+IKKYA+VVRVLAHTQ+ + GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSENNG-ASVARELERIKKYATVVRVLAHTQLSQT-GLAQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG+IA+KV++A FEK V +VF+++E ID+I VTKG GY GV++RWGVT+
Sbjct: 179 LSEIQVNGGSIADKVEFAKANFEKTFDVKSVFEQNECIDVIAVTKGHGYSGVISRWGVTK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP++V F+VAR+GQ+GYH RT +N K+Y++ G E +G T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSKVMFSVARSGQDGYHRRTTINHKIYRIDNGTNEG-SGST 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|332859844|ref|XP_525601.3| PREDICTED: 60S ribosomal protein L3, partial [Pan troglodytes]
Length = 386
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/274 (70%), Positives = 242/274 (88%), Gaps = 1/274 (0%)
Query: 38 PRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVT 97
PRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVT
Sbjct: 1 PRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVT 60
Query: 98 IIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQY 157
I+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYKNW KSKKKAFTKY K++
Sbjct: 61 IVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKW 120
Query: 158 ETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDY 217
+ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHLMEIQVNGGT+AEK+D+
Sbjct: 121 QDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDW 179
Query: 218 AYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA 277
A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGA
Sbjct: 180 ARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGA 239
Query: 278 WHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
WHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 WHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 273
>gi|391335187|ref|XP_003741977.1| PREDICTED: 60S ribosomal protein L3-like [Metaseiulus occidentalis]
Length = 412
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/309 (64%), Positives = 251/309 (81%), Gaps = 7/309 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS GFLPRKR ARHRGKVK+FPKDD +KP LTAFLGYK+GMTHIVR+V
Sbjct: 1 MSHRKFHAPRHGSTGFLPRKRCARHRGKVKSFPKDDKTKPVHLTAFLGYKSGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVT+IETPP++++GVVGY++TPRGLR+L T++A+H+S++ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTVIETPPIVIIGVVGYIETPRGLRALKTIFAEHVSDDARRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAFT+ + ++ EG K I+ +KI+KY +VVRV+ HTQ+ +K +QKKAH
Sbjct: 121 NWYNSKKKAFTRSALKWRQPEGLKMIERDFKKIQKYCTVVRVIVHTQMSMLK-RRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+IA+K+ +A EK +P+ VF +DEMIDIIGVTKG G +GV +RW +
Sbjct: 180 IMEIQLNGGSIADKIKFAREHMEKAVPIKNVFAQDEMIDIIGVTKGHGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE------ 314
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGDGFHTVDGKLV 299
Query: 315 SHTGITEFD 323
S+ G TE+D
Sbjct: 300 SNNGSTEYD 308
>gi|195157752|ref|XP_002019760.1| GL12566 [Drosophila persimilis]
gi|194116351|gb|EDW38394.1| GL12566 [Drosophila persimilis]
Length = 415
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKTSKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV +A EK I V VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|307169360|gb|EFN62081.1| 60S ribosomal protein L3 [Camponotus floridanus]
Length = 402
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/278 (70%), Positives = 242/278 (87%), Gaps = 1/278 (0%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+GF P+KR+ RHRGKVKAFPKDD +KP LTAF+GYKAGMTH+VR+ ++PGSK++KKE
Sbjct: 1 MGFYPKKRSQRHRGKVKAFPKDDSNKPVHLTAFIGYKAGMTHVVREADRPGSKVNKKEIV 60
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
EAVTI+ETPPM+VVG+VGY++TP GLR+L TVWA+HLSE+ RRRFYKNW KSKKKAFTK
Sbjct: 61 EAVTILETPPMIVVGLVGYIETPHGLRALATVWAEHLSEDCRRRFYKNWYKSKKKAFTKA 120
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
SK+++ D G+KSI+A L+KIKKY SVVR++AHTQ++ ++ +QKKAH+MEIQ+NGGTI +
Sbjct: 121 SKKWQDDLGRKSIEADLKKIKKYCSVVRIIAHTQMKLLRQ-RQKKAHIMEIQLNGGTIED 179
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
KV +A EK +PV VF DEMID+IGVTKGKGY+GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KVQWAREHLEKPVPVSNVFASDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
CIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 277
>gi|254693009|gb|ACT79354.1| LP14077p [Drosophila melanogaster]
Length = 418
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 3 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 62
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 63 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 122
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 123 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAH 181
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV +A EK I V VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 182 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 241
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 242 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 292
>gi|17737907|ref|NP_524316.1| ribosomal protein L3, isoform A [Drosophila melanogaster]
gi|442618558|ref|NP_731548.2| ribosomal protein L3, isoform H [Drosophila melanogaster]
gi|195571809|ref|XP_002103895.1| GD18739 [Drosophila simulans]
gi|3122718|sp|O16797.3|RL3_DROME RecName: Full=60S ribosomal protein L3
gi|2384754|gb|AAC26144.1| ribosomal protein L3 [Drosophila melanogaster]
gi|23170971|gb|AAF54610.2| ribosomal protein L3, isoform A [Drosophila melanogaster]
gi|194199822|gb|EDX13398.1| GD18739 [Drosophila simulans]
gi|440217317|gb|AAN13496.2| ribosomal protein L3, isoform H [Drosophila melanogaster]
Length = 416
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV +A EK I V VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|198455295|ref|XP_001359937.2| GA18487 [Drosophila pseudoobscura pseudoobscura]
gi|198133184|gb|EAL29089.2| GA18487 [Drosophila pseudoobscura pseudoobscura]
Length = 412
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKTSKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV +A EK I V VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|194902102|ref|XP_001980590.1| GG17978 [Drosophila erecta]
gi|190652293|gb|EDV49548.1| GG17978 [Drosophila erecta]
Length = 416
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV +A EK I V VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|195499987|ref|XP_002097183.1| GE26079 [Drosophila yakuba]
gi|194183284|gb|EDW96895.1| GE26079 [Drosophila yakuba]
Length = 416
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV +A EK I V VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|195329914|ref|XP_002031655.1| GM23925 [Drosophila sechellia]
gi|194120598|gb|EDW42641.1| GM23925 [Drosophila sechellia]
Length = 611
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV +A EK I V VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|393215986|gb|EJD01477.1| 60S ribosomal protein L3 [Fomitiporia mediterranea MF3/22]
Length = 388
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/296 (71%), Positives = 263/296 (88%), Gaps = 2/296 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++K+E EAVT++ETPPMMVVGVVGYV+TPRGLR+L TVWA HLS+E++RRFYK
Sbjct: 61 DRPGSKMNKREVVEAVTVVETPPMMVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFT+Y+K+ D G KS+ +LE+I+KY +VVRVLAHTQIR+ GLKQKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKAAED-GGKSVARELERIRKYCTVVRVLAHTQIRQT-GLKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KV++A+G FEK + V ++F++DE+ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFAHGLFEKPVDVSSIFEQDEVIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKK+Y++GKG E++
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRVGKGDDENN 294
>gi|60688481|gb|AAH91460.1| Ribosomal protein L3 [Danio rerio]
gi|182889202|gb|AAI64784.1| Rpl3 protein [Danio rerio]
Length = 403
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/291 (69%), Positives = 248/291 (85%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVGVVGYV TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVVETPPMIVVGVVGYVMTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +EGKK ++ +KKY ++R++AHTQ+R + +QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKRWQDEEGKKQLEKDFSSMKKYCQIIRIIAHTQMRLLPH-RQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTI++KVD+A E+ IP+ VF +DEMID+IGVTKG G +GV +RW +
Sbjct: 180 LMEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVG 290
>gi|221116204|ref|XP_002167181.1| PREDICTED: 60S ribosomal protein L3-like [Hydra magnipapillata]
Length = 403
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/291 (66%), Positives = 239/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHG+LGFLPRKR+ + ++K FPKDD +KPC LT F+G+KAGMTHIVR+V
Sbjct: 1 MSHRKFEAPRHGNLGFLPRKRSKKQLARMKTFPKDDETKPCHLTGFIGFKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ GSK+HKKE EAVTI+ETPP+++VG+VGYV+TPRGLR L TVWA+HLS+E +RRFYK
Sbjct: 61 DRVGSKVHKKEVVEAVTILETPPIVIVGIVGYVETPRGLRQLTTVWAEHLSDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSK KAFTK SK++ + GKKSI+ LEK+ KY V+RVL HTQ R + GLKQKKAH
Sbjct: 121 NWYKSKHKAFTKSSKKWTDENGKKSIERDLEKMIKYCKVIRVLVHTQQR-LVGLKQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG I +KV++A EK I V VF +DEMID IG+TKG G++GV RWG +
Sbjct: 180 IMEIQINGGKIVDKVNWAKNHLEKTISVSNVFGQDEMIDAIGITKGHGFKGVTYRWGTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVAC+GAWHPAR+ FTV RAGQ GYHHR E NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACVGAWHPARIGFTVPRAGQCGYHHRVERNKKIYRIGRG 290
>gi|242017396|ref|XP_002429175.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis]
gi|212514053|gb|EEB16437.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis]
Length = 407
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/291 (67%), Positives = 242/291 (83%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFP+DD SKP LTAFLGYKAGMTH++R+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPRDDRSKPVHLTAFLGYKAGMTHVLREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTIIETPPM++VG VGY++TP GLR+L TVWA+HLSE+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTIIETPPMIIVGAVGYIQTPHGLRALVTVWAEHLSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +S++KAFTK SK+++ + G KSI +KI KY VRV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYRSEQKAFTKASKKWQDELGVKSIDKSFKKIIKYCRCVRVIAHTQMKLLKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG +A+KV + EK +PV VF DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGNMAQKVKWIKEHLEKPVPVSQVFAPDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEMNKKIYRIGQG 290
>gi|281204054|gb|EFA78250.1| 60S ribosomal protein L3 [Polysphondylium pallidum PN500]
Length = 399
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/308 (66%), Positives = 245/308 (79%), Gaps = 8/308 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKRAARH+GK+K+FPKDD +KP LTAF+GYKAGMTHIVRD+
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRAARHQGKIKSFPKDDRTKPVHLTAFMGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSK+HKKE EAVTI+E PPM +VG+VGY++T +GLR TVWAQHLS E RRRFYK
Sbjct: 61 EKPGSKMHKKEVVEAVTILECPPMYIVGLVGYLETAQGLRPYKTVWAQHLSNEFRRRFYK 120
Query: 141 NWCKSKKK-AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
W KS FTKY+K+YE D KKSI + IK+ +V+R +AHTQ+ K+ L QKKA
Sbjct: 121 QWYKSANHLVFTKYTKKYEND--KKSIDGAIAAIKRKCTVIRAIAHTQVHKL-NLGQKKA 177
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
++EIQVNGG+IA+KV++ FEK + V++VF ++EMIDIIGVTKGKG+ GV+ RWGV
Sbjct: 178 EVVEIQVNGGSIADKVNWVVENFEKTVTVESVFAENEMIDIIGVTKGKGFNGVIKRWGVR 237
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG----GQES 315
+LPRKTH+GLRKVACIGAWHP+RVS V RAGQ GYHHR E NKK+Y++GK G
Sbjct: 238 KLPRKTHKGLRKVACIGAWHPSRVSTAVPRAGQLGYHHRVETNKKIYRIGKAQPATGTSI 297
Query: 316 HTGITEFD 323
TG TEFD
Sbjct: 298 PTGATEFD 305
>gi|148232513|ref|NP_001087574.1| MGC84749 protein [Xenopus laevis]
gi|51261715|gb|AAH80121.1| MGC84749 protein [Xenopus laevis]
Length = 420
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/293 (67%), Positives = 240/293 (81%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ R RGK KAFPKD S P LTAFLGYKAGMTH+VR+V
Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSRRIRGKCKAFPKDRRSLPPHLTAFLGYKAGMTHVVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E E VTI+E PPM++VG+VGY T RGLR+ TVWA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVHKREIVEPVTILECPPMVIVGMVGYAPTARGLRTFKTVWAEHLTEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WCKSK+KAFTK SK++ + G K I L KIKKY +VVR +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKRKAFTKASKKWADEAGLKEINRDLRKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGT+A+KVD+ FEKQIPV VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTVAQKVDWIRQHFEKQIPVMNVFAQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTH+GLRKVACIG+WHPARV TVARAGQ GY HRTE+NKK+Y++G G Q
Sbjct: 240 LPRKTHKGLRKVACIGSWHPARVGSTVARAGQKGYFHRTELNKKIYRIGLGLQ 292
>gi|367010196|ref|XP_003679599.1| 60S ribosomal protein L3 [Torulaspora delbrueckii]
gi|359747257|emb|CCE90388.1| hypothetical protein TDEL_0B02590 [Torulaspora delbrueckii]
Length = 387
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 253/303 (83%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAV++++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVSVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D ++ +L +IKKYA+VVRVLAHTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYAQDGA--LVERELARIKKYATVVRVLAHTQVRKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FEK + VD+VF+++EMID++ VTKG G+EGV RWG R
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KVY++GKG ES+ T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGEDESNAS-T 296
Query: 321 EFD 323
FD
Sbjct: 297 NFD 299
>gi|291410164|ref|XP_002721356.1| PREDICTED: ribosomal protein L3-like isoform 1 [Oryctolagus
cuniculus]
Length = 400
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/291 (67%), Positives = 245/291 (84%), Gaps = 4/291 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRK +++HRGKV PKDDPSKP LTAFLGYKAG+THIV++V
Sbjct: 1 MSHRKFSVPRHGSLGFLPRKCSSQHRGKV---PKDDPSKPVHLTAFLGYKAGLTHIVQEV 57
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGS+++KKE EAVTI+ETPPM+V+G+VGYV+TPRGLR+ ++A+H+S++ +RRFYK
Sbjct: 58 DRPGSEVNKKEVVEAVTIVETPPMVVMGIVGYVETPRGLRTFKMMFAEHISDKCKRRFYK 117
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D GK+ + +KKY V+RVLAHTQ+R + L QKKAH
Sbjct: 118 NWHKSKKKAFTKYCKKWQDDAGKRQLDKDFSSMKKYCQVIRVLAHTQMRLLP-LWQKKAH 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV VF +DEMID+IGVTKGKGY+ V +RW +
Sbjct: 177 LMEIQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKAVTSRWHTKK 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LP KTHRGLRKVACIGAWHPARV+F+VA AGQ GYHHRTE+NKK+YK+G+G
Sbjct: 237 LPHKTHRGLRKVACIGAWHPARVAFSVAWAGQKGYHHRTEINKKIYKIGQG 287
>gi|209875731|ref|XP_002139308.1| 60S ribosomal protein L3 [Cryptosporidium muris RN66]
gi|209554914|gb|EEA04959.1| 60S ribosomal protein L3, putative [Cryptosporidium muris RN66]
Length = 390
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/291 (66%), Positives = 244/291 (83%), Gaps = 4/291 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PR GSLGFLPRKR +R+RGKVKAFPKDD ++P LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFERPRSGSLGFLPRKRCSRNRGKVKAFPKDDHTQPPHLTAFMGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKL+KKE EAVTIIETPPM+ VG VGY++TPRGL++L TV+A +LSEE +RRFY+
Sbjct: 61 DKPGSKLNKKEVVEAVTIIETPPMICVGFVGYIETPRGLKALTTVFAGYLSEECKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N+ KSK+KAFTKY+K Y ++ ++ ++ + K+Y +V+R L HTQ+ K GL +KKA
Sbjct: 121 NYYKSKRKAFTKYAKNYVENQ---RMEVEIARCKQYCTVIRALCHTQVSKT-GLNKKKAD 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+ EKVD+ FE+QIP+ ++F ++EMID+IG++KGKGY+GV++RWGVT+
Sbjct: 177 LMEIQVNGGTVTEKVDFCVRCFEQQIPISSIFSENEMIDVIGISKGKGYKGVISRWGVTK 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKT RG+RKV+CIGAWHPARV F V RAGQ GY RTEMNKK+Y++G G
Sbjct: 237 LPRKTRRGVRKVSCIGAWHPARVQFQVPRAGQKGYGQRTEMNKKIYRIGHG 287
>gi|429329033|gb|AFZ80792.1| 60S ribosomal protein L3, putative [Babesia equi]
Length = 388
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/291 (67%), Positives = 241/291 (82%), Gaps = 5/291 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PR GSLGFLPRKR HRGKV++FPKDDPS P TAF+GYKAGMTH+V +V
Sbjct: 1 MSHRKFERPRSGSLGFLPRKRCKMHRGKVRSFPKDDPSLPPHFTAFMGYKAGMTHVVTEV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSKLHKKE EAVTI+ETPPM+VVG+VGY++TP+GL+ L TVWA HLS+E RRRFYK
Sbjct: 61 DRPGSKLHKKEVVEAVTIVETPPMVVVGLVGYIETPKGLKVLTTVWAAHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+++ EGK + ++ +IK YA+VVR + HTQ K+ + +KAH
Sbjct: 121 NWYKSKKKAFTKYTKKFQ--EGK--VDKEISRIKNYATVVRAICHTQPSKL-SISLRKAH 175
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+QVNGG+IA+KVD+ G FEK IPV +VF ++EM+D +GVTKG G +GVV+R+GVTR
Sbjct: 176 IMEVQVNGGSIADKVDFVTGLFEKPIPVSSVFSENEMLDTVGVTKGHGTKGVVSRYGVTR 235
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKK+Y++G G
Sbjct: 236 LPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIGLG 286
>gi|358443182|gb|AEU11837.1| control protein HCTL036 [Heliconius melpomene]
Length = 392
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/281 (69%), Positives = 241/281 (85%), Gaps = 1/281 (0%)
Query: 31 HGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKK 90
HGS+GF P+KR+ RHRGKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KK
Sbjct: 1 HGSMGFYPKKRSRRHRGKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 60
Query: 91 ETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAF 150
E EAVT+IETPPM+ VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYKNW K KKKAF
Sbjct: 61 EIVEAVTVIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAF 120
Query: 151 TKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGT 210
TK SK+++ + G+KSI+ +K+ +Y SVVRV+AHTQ++ +K +QKKAH+MEIQVNGG
Sbjct: 121 TKSSKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLK-QRQKKAHIMEIQVNGGN 179
Query: 211 IAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 270
I +KV +A EK IPVD+VF +DEMID IGVTKGKGY+GV +RW +LPRKTH+GLR
Sbjct: 180 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLR 239
Query: 271 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
KVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 KVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 280
>gi|195453495|ref|XP_002073813.1| GK14309 [Drosophila willistoni]
gi|194169898|gb|EDW84799.1| GK14309 [Drosophila willistoni]
Length = 414
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/291 (67%), Positives = 239/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSCRHRGKVKAFPKDDASKPVHLTCFVGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV + EK I V VF +DEM+D +GVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSIEDKVKWVREHLEKPIQVSNVFGQDEMVDCVGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|365989292|ref|XP_003671476.1| ribosomal protein L3 [Naumovozyma dairenensis CBS 421]
gi|343770249|emb|CCD26233.1| hypothetical protein NDAI_0H00590 [Naumovozyma dairenensis CBS 421]
Length = 387
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/303 (69%), Positives = 250/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHG LGFLPRKRA RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKFEQPRHGHLGFLPRKRAVSIRGRVKSFPKDDQSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAV++++TP ++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVSVVDTPALVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D + I+ +L +I KYASVVRVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAE--IERELARISKYASVVRVLVHTQIRKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+IAEKV +A FEK + VD+VF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSIAEKVQWAREHFEKTVSVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAGQ GYHHRT +N KVY++GKG ES+ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQRGYHHRTSINHKVYRVGKGEDESN-GST 296
Query: 321 EFD 323
FD
Sbjct: 297 SFD 299
>gi|298705189|emb|CBJ28620.1| Ribosomal protein L3 [Ectocarpus siliculosus]
Length = 423
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/309 (67%), Positives = 260/309 (84%), Gaps = 4/309 (1%)
Query: 15 AAQRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMT 74
A RR MSHRKFE PR+GSLGFLP+KR +HRG +++FPKDD +K LTAF+ YKAGMT
Sbjct: 28 AHTRRTMSHRKFEAPRNGSLGFLPKKRTKKHRGHIRSFPKDDAAKEPHLTAFMAYKAGMT 87
Query: 75 HIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEV 134
HI R+V++PGSK+HKKE EAVTI+ETPP++VVGVVGYV+TP+GLR+L TVWA HLS+E
Sbjct: 88 HIAREVDRPGSKVHKKEVVEAVTILETPPIVVVGVVGYVETPKGLRTLTTVWAGHLSDEC 147
Query: 135 RRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGL 194
+RRFYK+W SKKKAFT+Y+K++ + + I A+L +IK+YA VVRV+AHTQ+ +K L
Sbjct: 148 KRRFYKHWYTSKKKAFTRYAKKFA--DAPQEIDAELGRIKQYAQVVRVIAHTQVGLVK-L 204
Query: 195 KQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVT 254
+QKKAH+ EIQVNGG +A KVD+A G FE+++PVDAVF KDE ID++G +KG G EGVVT
Sbjct: 205 RQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVT 264
Query: 255 RWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
RWGVTRLPRKTHRGLRKVACIGAWHPARVSF+VARAGQ+GYHHRTE+NKK+Y++GK G
Sbjct: 265 RWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDV 324
Query: 315 SHTGITEFD 323
+ + TE D
Sbjct: 325 A-SASTEAD 332
>gi|358443194|gb|AEU11843.1| control protein HCTL036 [Heliconius erato]
Length = 392
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/281 (69%), Positives = 241/281 (85%), Gaps = 1/281 (0%)
Query: 31 HGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKK 90
HGS+GF P+KR+ RHRGKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KK
Sbjct: 1 HGSMGFYPKKRSRRHRGKVKAFPKDDASKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 60
Query: 91 ETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAF 150
E EAVT+IETPPM+ VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYKNW K KKKAF
Sbjct: 61 EIVEAVTVIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAF 120
Query: 151 TKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGT 210
TK SK+++ + G+KSI+ +K+ +Y SV+RV+AHTQ++ +K +QKKAH+MEIQVNGG
Sbjct: 121 TKSSKKWQDELGRKSIEKDFKKMIRYCSVIRVIAHTQMKLLK-QRQKKAHIMEIQVNGGN 179
Query: 211 IAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 270
I +KV +A EK IPVD+VF +DEMID IGVTKGKGY+GV +RW +LPRKTH+GLR
Sbjct: 180 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLR 239
Query: 271 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
KVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 KVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 280
>gi|363894901|gb|AEW42982.1| putative 60S ribosomal protein L3 [Haliotis diversicolor]
Length = 400
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/291 (65%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS GFLP+KR+ R RGKVK+FPKDD SKP LT FL YKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSKGFLPKKRSRRQRGKVKSFPKDDKSKPVHLTTFLTYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK +KKE EAVTI+E PPM++ GV GY++TP GLR+L T+WA+HLSEE RRRFYK
Sbjct: 61 DRPGSKTNKKEVVEAVTILEAPPMVIAGVTGYIETPHGLRTLKTIWAEHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFTK +K+++ + G K I K+KKY +++RV+AHTQ + ++ +QKKAH
Sbjct: 121 NWSRSKKKAFTKSNKKWQDEAGMKEIDRDFAKLKKYCTIIRVIAHTQTKLLRK-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGG+IA+KVD+A EK +PV +VF++DE+ID+IGVTKG+G +GV +RW +
Sbjct: 180 LMEIQLNGGSIADKVDWAREHLEKPVPVSSVFEQDEVIDVIGVTKGRGVKGVTSRWHCKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE NKK+Y+LG G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQYTVARAGQKGYHHRTERNKKIYRLGAG 290
>gi|428179797|gb|EKX48666.1| large subunit ribosomal protein L3e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 401
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/310 (67%), Positives = 253/310 (81%), Gaps = 10/310 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGF PRKR A HRG+V+ FP+DD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFERPRHGSLGFCPRKRCAHHRGRVRKFPRDDASKPCHLTAFMGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK HKKE+ EAVTI+E PP++VVG+VGYVKTPRGLRSL TVWA+HLS+E RRR YK
Sbjct: 61 DKPGSKQHKKESVEAVTILEAPPIVVVGIVGYVKTPRGLRSLTTVWAKHLSDEFRRRMYK 120
Query: 141 NWCKSK-KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
NW KSK KKAFTKY+K E E K+ ++E+IKKY VVRV+AHTQ+ K+ + QKKA
Sbjct: 121 NWYKSKSKKAFTKYTK--EESERSKNSDKEIERIKKYCQVVRVIAHTQLSKV-NIGQKKA 177
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+MEIQVNGGT +KVD+A FE+Q+PV +VF ++EMID+IGVTKG GY+GVV+RW VT
Sbjct: 178 HVMEIQVNGGTTKDKVDFATKLFEQQVPVKSVFSQNEMIDVIGVTKGHGYKGVVSRWHVT 237
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK------GGQ 313
+LPRKTHRGLRKV C+G+WHP+ V ++VARAGQ GY HRTE+NKK+Y++G+ G
Sbjct: 238 KLPRKTHRGLRKVGCVGSWHPSAVGWSVARAGQKGYFHRTELNKKIYRIGEAARKADGSI 297
Query: 314 ESHTGITEFD 323
E TEFD
Sbjct: 298 EHKNATTEFD 307
>gi|367005320|ref|XP_003687392.1| 60S ribosomal protein L3 [Tetrapisispora phaffii CBS 4417]
gi|357525696|emb|CCE64958.1| hypothetical protein TPHA_0J01360 [Tetrapisispora phaffii CBS 4417]
Length = 387
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/303 (69%), Positives = 252/303 (83%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA RGKV+AFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGKVRAFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TP ++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPEIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y EG I+ +L +IKKYASVVRVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKY-AQEG-AGIERELARIKKYASVVRVLVHTQVRKTP-LVQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FEK + VD+VF+++EMID++ VTKG G+EGV RWG R
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIG WHPA V ++VARAGQNGYHHRT +N K+Y++GK G E+ + T
Sbjct: 238 LPRKTHRGLRKVACIGPWHPAHVMWSVARAGQNGYHHRTSINHKIYRVGKAGDEA-SAAT 296
Query: 321 EFD 323
FD
Sbjct: 297 NFD 299
>gi|48597014|ref|NP_001001590.1| 60S ribosomal protein L3 [Danio rerio]
gi|45504885|gb|AAS66967.1| ribosomal protein L3 [Danio rerio]
Length = 403
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/291 (69%), Positives = 247/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF P HGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPLHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVGVVGYV TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVVETPPMIVVGVVGYVMTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +EGKK ++ +KKY ++R++AHTQ+R + +QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKRWQDEEGKKQLEKDFSSMKKYCQIIRIIAHTQMRLLPH-RQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTI++KVD+A E+ IP+ VF +DEMID+IGVTKG G +GV +RW +
Sbjct: 180 LMEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVG 290
>gi|226475914|emb|CAX72047.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/293 (67%), Positives = 240/293 (81%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E E VTI+E PPM++VG+VGY T RGLR+ TVWA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTARGLRTFKTVWAEHLTEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WCKSKKKAFTK S+++ + G I L+KIKKY +VVR +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI++KVD+ FEKQIPV VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKK+Y++G G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQ 292
>gi|384491983|gb|EIE83179.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
Length = 387
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/303 (67%), Positives = 252/303 (83%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGF PRKR HRG+VKA+PKDD KP LTAF+GYKAGMTHIVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFGPRKRTRSHRGRVKAYPKDDAKKPVHLTAFMGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSK+HKKE EAVT+IE P M+VVGVVGYV+TPRGLRSL TVWA+HLSEE +RRFYK
Sbjct: 61 ERPGSKMHKKEIVEAVTVIEAPAMVVVGVVGYVETPRGLRSLTTVWAEHLSEEAKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +SKKKAFTKY+++Y EG K + +LE+IKKY SVVRV+AHTQI K K L Q+KAH
Sbjct: 121 NWYRSKKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHTQISKAK-LHQRKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG++ +KVD+A FEK++ V ++F++DEMIDII TKG G+EGV RWG +
Sbjct: 178 IMEIQLNGGSVEQKVDWAREHFEKEVTVGSIFEQDEMIDIIATTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKK+Y++ G ++ +G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIYRIATGA-DAKSGTT 296
Query: 321 EFD 323
E+D
Sbjct: 297 EYD 299
>gi|328876376|gb|EGG24739.1| 60S ribosomal protein L3 [Dictyostelium fasciculatum]
Length = 455
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/308 (65%), Positives = 247/308 (80%), Gaps = 7/308 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRK+A R G VK+FPKDD SKP LTAF+GYKAGMTHIVRD+
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKKANRLLGHVKSFPKDDRSKPVHLTAFIGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EK GSK+HKKE EAVTIIETPPM+VVG+VGY +T +GLR+ TVWAQHLS E RR FYK
Sbjct: 61 EKLGSKMHKKEIVEAVTIIETPPMVVVGLVGYTETLKGLRAYKTVWAQHLSNEFRRHFYK 120
Query: 141 NWCKSKKK-AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
+WCKSK K AFTKYSK++E EG I +E IK+ +++RV+AH+Q K+ L QKKA
Sbjct: 121 SWCKSKNKLAFTKYSKKFE--EGTIKISNAVEAIKRKCAIIRVIAHSQPAKVAALHQKKA 178
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H++EIQ+NGG+IA+K+ +A FEK I +++VF ++EM+D+I VTKGKG++GVV RWGV
Sbjct: 179 HMLEIQLNGGSIADKLKWAVDMFEKTISIESVFAENEMLDVISVTKGKGFQGVVKRWGVK 238
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG----GQES 315
+LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ G+ HR E NKK+Y++GK G +
Sbjct: 239 KLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQMGFFHRVETNKKIYRIGKAQPTTGPKI 298
Query: 316 HTGITEFD 323
TG TEFD
Sbjct: 299 PTGATEFD 306
>gi|323650150|gb|ADX97161.1| 60S ribosomal protein l3 [Perca flavescens]
Length = 276
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/277 (68%), Positives = 236/277 (85%), Gaps = 1/277 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGK K+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGYV+TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVETPRGLRSFKTIFAEHVSDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D+GKK ++ +KKY V+R++AHTQ+R + L QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDDGKKQLEKDFASMKKYCQVIRIIAHTQMRLLP-LAQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+Q+NGG I++KVD+A E+ +P++ VF +DEMID+IG+TKG Y+GV +RW +
Sbjct: 180 LMEVQLNGGNISDKVDWAREKLEQAVPINTVFTQDEMIDVIGITKGHRYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHH 297
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHH
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHH 276
>gi|421975946|gb|AFX73005.1| ribosomal protein L3 [Spirometra erinaceieuropaei]
Length = 420
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/293 (66%), Positives = 243/293 (82%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KF PRHGSLGF P+KR+ R RGK KAFPKD S P LTAF+G+KAGMTH+VRDV
Sbjct: 1 MSHGKFSAPRHGSLGFTPKKRSRRIRGKCKAFPKDRRSAPPHLTAFMGFKAGMTHVVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HKKE E VTI+E PPM++VG+VGY++T +GLR+ T+WA+HLSEE RRRFYK
Sbjct: 61 DRPGSKVHKKEIVEPVTILECPPMVIVGIVGYIQTAKGLRTFKTIWAEHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
++CKSK+KAFTK SK++ + G +I L+K+KKY +V+RV+ HTQ+R MK +QKKAH
Sbjct: 121 DFCKSKRKAFTKASKKWADEAGLAAINRDLKKMKKYCTVIRVIVHTQMRLMKH-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGT+++KVD+A EKQIPV VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTVSQKVDWARSHLEKQIPVANVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTEMNKK+Y++G G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTEMNKKIYRIGLGIQ 292
>gi|50311593|ref|XP_455822.1| 60S ribosomal protein L3 [Kluyveromyces lactis NRRL Y-1140]
gi|74660266|sp|Q6CJR7.1|RL3_KLULA RecName: Full=60S ribosomal protein L3
gi|49644958|emb|CAG98530.1| KLLA0F16511p [Kluyveromyces lactis]
Length = 387
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/303 (67%), Positives = 252/303 (83%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA RG+VK+FPKDD +KP LT+FLGYKAGM+ IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y E + +L +IKKYASVVRVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYA--ENGAQVDRELARIKKYASVVRVLVHTQVRKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG++++KVD+A FEK + VD+VF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KVY++GKG E++ T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAA-T 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|320583084|gb|EFW97300.1| 60S ribosomal protein L3 [Ogataea parapolymorpha DL-1]
Length = 389
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/303 (68%), Positives = 251/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKRA + RG+ KAFPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKFEQPRHGSLGFLPRKRAVKQRGRCKAFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TP ++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKMHKREIVEAATVVDTPELVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKK+AFTKYS++Y + I+ +L +IKKY SVVRVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKRAFTKYSEKYANSAAE--IEKELARIKKYCSVVRVLVHTQIRKTP-LTQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG++++KVD+A FEK + VD+VF+++EMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRG RKVACIGAWHP+ V +TVARAGQ GYHHRT +N KVY++GK G E+ +G T
Sbjct: 238 LPRKTHRGTRKVACIGAWHPSHVMWTVARAGQRGYHHRTSINHKVYRIGKAGDEA-SGAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|254579294|ref|XP_002495633.1| 60S ribosomal protein L3 [Zygosaccharomyces rouxii]
gi|238938523|emb|CAR26700.1| ZYRO0B16082p [Zygosaccharomyces rouxii]
Length = 388
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/303 (67%), Positives = 251/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+ PRHGSLGFLPRKR A RG+VK+FPKDD +KP LT+FLGYKAGM+ IVRD+
Sbjct: 1 MSHRKYSAPRHGSLGFLPRKRCASPRGRVKSFPKDDKTKPVGLTSFLGYKAGMSTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAV++++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+E++RRFY+
Sbjct: 61 DRPGSKFHKREVVEAVSVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D + I+ +L +I KYA+VVRVLAHTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDAAQ--IERELARINKYATVVRVLAHTQIRKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGGT A+KV +A FEK + VD+VF+++EMID+ VTKG GYEGV RWG TR
Sbjct: 178 LAEIQINGGTTADKVAWAKEHFEKTVSVDSVFEQNEMIDVAAVTKGHGYEGVTHRWGTTR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP V ++VARAGQNG+HHRT +N K+Y++GKG E++ T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPNHVMWSVARAGQNGFHHRTSINHKIYRVGKGDDEANAA-T 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|29841161|gb|AAP06174.1| SJCHGC06297 protein [Schistosoma japonicum]
gi|226475918|emb|CAX72049.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226475924|emb|CAX72052.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226475926|emb|CAX72053.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226475928|emb|CAX72054.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480226|emb|CAX78777.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480228|emb|CAX78778.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480236|emb|CAX78782.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480238|emb|CAX78783.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480240|emb|CAX78784.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480242|emb|CAX78785.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480244|emb|CAX78786.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/293 (67%), Positives = 240/293 (81%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E E VTI+E PPM++VG+VGY T +GLR+ TVWA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WCKSKKKAFTK S+++ + G I L+KIKKY +VVR +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI++KVD+ FEKQIPV VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKK+Y++G G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQ 292
>gi|320166087|gb|EFW42986.1| ribosomal protein L3 isoform b [Capsaspora owczarzaki ATCC 30864]
Length = 416
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/304 (66%), Positives = 253/304 (83%), Gaps = 2/304 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
+HRKF PRHGSLGF PRKR+A HRG+VK+FP+DD SKPC LTAFLGYKAGMTH+VR+V+
Sbjct: 21 AHRKFSAPRHGSLGFAPRKRSATHRGRVKSFPRDDASKPCHLTAFLGYKAGMTHVVREVD 80
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+ GSKL+KKE EAVTI+E PP++VVG VGYV TPRGLR+L TVWA+HLSEEVRRRFYKN
Sbjct: 81 RMGSKLNKKEIVEAVTIVEAPPVVVVGAVGYVATPRGLRALTTVWAEHLSEEVRRRFYKN 140
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W + KKKAFTKY+K+Y T+EGKKSI+ + ++IKKY SVVR+L HTQ +K+ QKKAH+
Sbjct: 141 WYQCKKKAFTKYAKKYSTEEGKKSIEKEFDRIKKYCSVVRLLVHTQTKKLNLGGQKKAHI 200
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGG++A+K+ YA FEK+I + VF ++EM+D+IGVT+GKG+ GV R+G RL
Sbjct: 201 MEIQVNGGSVADKLKYARSHFEKEISLKDVFSENEMVDVIGVTRGKGFTGVTYRFGTRRL 260
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES--HTGI 319
PRK+H+GLRKVACIGAWHPA V+ +VARAGQ GYHHRTE+NKK+Y++G G +
Sbjct: 261 PRKSHKGLRKVACIGAWHPANVNRSVARAGQKGYHHRTELNKKIYRVGAGASSGAKNNAS 320
Query: 320 TEFD 323
TE+D
Sbjct: 321 TEYD 324
>gi|289743297|gb|ADD20396.1| ribosomal protein L3 [Glossina morsitans morsitans]
Length = 413
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/291 (67%), Positives = 239/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ RHRGKVKAFPKDD SKP LT F+GYKAGM+HIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSRRHRGKVKAFPKDDASKPVHLTCFIGYKAGMSHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KS+KKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSQKKAFTKASKKWGDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV + EK + V VF +DEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSIEDKVKWVREHLEKPVAVSNVFGQDEMIDCIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|46123823|ref|XP_386465.1| RL3_NEUCR 60S ribosomal protein L3 [Gibberella zeae PH-1]
Length = 378
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/290 (66%), Positives = 241/290 (83%), Gaps = 3/290 (1%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+ +LPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+++PG+K +KKE
Sbjct: 1 MAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDLDRPGAKANKKEIV 60
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
EAVTI++TPPM+VVG+VGY++TPRGLRSL TVWA+HLS+E++RRFYKNW KSKKKAFTKY
Sbjct: 61 EAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIKRRFYKNWYKSKKKAFTKY 120
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
+K++ + G SI +LE+IKKY +VVRVLAHTQIRK LKQKKAHLMEIQVNGG+IA+
Sbjct: 121 AKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQVNGGSIAD 178
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
KV + FEK + V ++F++DEMID++ VTKG G+ GV RWG +LPRKTH+GLRKVA
Sbjct: 179 KVSFGQELFEKPVDVSSIFEQDEMIDVVAVTKGHGFNGVTARWGTKKLPRKTHKGLRKVA 238
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
CIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKG + + TE D
Sbjct: 239 CIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-TEID 287
>gi|94468802|gb|ABF18250.1| ribosomal protein L3 [Aedes aegypti]
Length = 415
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/291 (66%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F PRKRA+RH+G++KAFPKDDP+KP LTAFL YKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFAPRKRASRHQGRIKAFPKDDPAKPVHLTAFLAYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPP++VVG VGY++TP G R+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTILETPPIVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAFTK SK++ D GKKSI+ +K+ +Y +RV+AH+QIR +K QKKAH
Sbjct: 121 NWHASKKKAFTKASKKWTDDLGKKSIEDNFKKMIRYCKFIRVIAHSQIRLIKQ-GQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
++EIQ+NGGTI +KV++ EK +PV VF++DEMID + VTKGKG++GV +RW +
Sbjct: 180 IIEIQLNGGTIEDKVNWVKEHLEKPVPVADVFRQDEMIDCVAVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|323510289|dbj|BAJ78038.1| cgd5_1580 [Cryptosporidium parvum]
Length = 388
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/291 (64%), Positives = 243/291 (83%), Gaps = 4/291 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PR GSLGFLPRKR +R+RGKVKAFPKDD ++P LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFERPRSGSLGFLPRKRCSRNRGKVKAFPKDDSNQPPHLTAFMGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKL+KKE EAVTI+ETPPM+ VG VGY++TP GLR+L TV+A +LSEE +RRFYK
Sbjct: 61 DKPGSKLNKKEVVEAVTIVETPPMICVGFVGYIETPNGLRALTTVFAGYLSEECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N+ +SK+KAFTKY++ Y ++ ++A++ + K+Y +V+R L HTQ+ K GL +KKA
Sbjct: 121 NYYRSKRKAFTKYARNYAENQ---RMEAEIARCKQYCTVIRALCHTQVSKT-GLNKKKAD 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGT+++K+D+ FE+ IPV +F ++EMIDIIG++KGKGY+GV++RWGVT+
Sbjct: 177 IMEIQVNGGTVSDKIDFCVRCFEQPIPVSTIFNENEMIDIIGISKGKGYKGVISRWGVTK 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKT RG+RKV+CIGAWHPARV F V RAGQ GY RTE NKK+Y++G+G
Sbjct: 237 LPRKTRRGVRKVSCIGAWHPARVQFQVPRAGQKGYGQRTETNKKIYRIGRG 287
>gi|254572870|ref|XP_002493544.1| 60S ribosomal protein L3 [Komagataella pastoris GS115]
gi|238033343|emb|CAY71365.1| Protein component of the large (60S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328354631|emb|CCA41028.1| 60S ribosomal protein L3 [Komagataella pastoris CBS 7435]
Length = 388
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/303 (67%), Positives = 251/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLP+KRA+ R + KAFPKDD SKP LTAF+GYKAGM+ IVRD+
Sbjct: 1 MSHRKFEAPRHGSLGFLPKKRASSPRARCKAFPKDDKSKPVALTAFMGYKAGMSTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAV+I++TPP++VVGVVGYV+T GL+SL TVWA+HLS++VRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAVSIVDTPPLVVVGVVGYVETTSGLKSLTTVWAEHLSDDVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKK AF+KYS +Y D SI+ +L +IKKYASVVRVL HTQIRK L QK+AH
Sbjct: 121 NWYKSKKVAFSKYSAKYANDPA--SIETELARIKKYASVVRVLVHTQIRKTP-LNQKRAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FE+ I VD VF+++E ID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSISEKVDWARDHFEQTIAVDTVFEQNENIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N K+Y++GKG ES+ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGFHHRTSINHKIYRVGKGDDESN-GST 296
Query: 321 EFD 323
E+D
Sbjct: 297 EYD 299
>gi|226480224|emb|CAX78776.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/293 (66%), Positives = 239/293 (81%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E E VTI+E PPM++VG+VGY T +GLR+ TVWA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WCKSKKKAFTK S+++ + G I L+KIKKY +VVR +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI++KVD+ FEKQIPV VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ Y HRTE+NKK+Y++G G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKSYFHRTELNKKIYRIGMGLQ 292
>gi|226475916|emb|CAX72048.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/293 (66%), Positives = 239/293 (81%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E E VTI+E PPM++VG+VGY T +GLR+ TVWA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WCKSKKKAFTK S+++ + G I L+KIKKY +VVR +AH Q+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHIQMRLMKH-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI++KVD+ FEKQIPV VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKK+Y++G G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQ 292
>gi|195389887|ref|XP_002053605.1| GJ23255 [Drosophila virilis]
gi|194151691|gb|EDW67125.1| GJ23255 [Drosophila virilis]
Length = 415
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/291 (66%), Positives = 237/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ RHRGKVKAFPKDD +KP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSCRHRGKVKAFPKDDATKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+ VG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTILETPPMIAVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KS+KKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR + +QKKAH
Sbjct: 121 NWYKSQKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIR-LINQRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV + EK I V VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSIEDKVKWVREHLEKPIQVRNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|226480222|emb|CAX78775.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/293 (66%), Positives = 239/293 (81%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E E VTI+E PPM++VG+VGY T +GLR+ TVWA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WCKSKKK FTK S+++ + G I L+KIKKY +VVR +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKDFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTI++KVD+ FEKQIPV VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKK+Y++G G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQ 292
>gi|195055484|ref|XP_001994649.1| GH14923 [Drosophila grimshawi]
gi|193892412|gb|EDV91278.1| GH14923 [Drosophila grimshawi]
Length = 417
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/291 (65%), Positives = 238/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ RHRGKVKA+PKDD SKP LT F+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSCRHRGKVKAYPKDDASKPVHLTCFIGYKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+ VG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIAVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KS+KKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 121 NWFKSQKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG++ +KV + EK I V VF +DEM+D +GVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSVEDKVKWVREHLEKPIQVSKVFGQDEMVDCVGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>gi|357623605|gb|EHJ74691.1| ribosomal protein L3 [Danaus plexippus]
Length = 399
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/278 (68%), Positives = 240/278 (86%), Gaps = 1/278 (0%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+GF P+KR+ RHRGKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE
Sbjct: 1 MGFYPKKRSRRHRGKVKAFPKDDASKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 60
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
EAVTIIETPPM+ VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYKNW K KKKAFTK
Sbjct: 61 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKS 120
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
SK+++ + G+KSI+ +K+ +Y SV+RV+AHTQ++ +K +QKKAH+MEIQVNGG+I +
Sbjct: 121 SKKWQDELGRKSIEKDFKKMIRYCSVIRVIAHTQMKLLK-QRQKKAHIMEIQVNGGSIED 179
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
KV++A EK IP+D+VF +DEMID IGVTKGKGY+GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KVNWAREHLEKPIPIDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
CIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G+G
Sbjct: 240 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQG 277
>gi|195107417|ref|XP_001998310.1| GI23698 [Drosophila mojavensis]
gi|193914904|gb|EDW13771.1| GI23698 [Drosophila mojavensis]
Length = 415
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/292 (66%), Positives = 239/292 (81%), Gaps = 2/292 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD +KP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSSRHRGKVKAFPKDDATKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+ VG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTILETPPMIAVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKS-KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
NW KS KKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKA
Sbjct: 121 NWYKSEKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKA 179
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+MEIQ+NGG+I +KV + EK I V VF +DEM+D +GVTKGKG++GV +RW
Sbjct: 180 HIMEIQLNGGSIEDKVKWVREHLEKPIQVSNVFGQDEMVDCVGVTKGKGFKGVTSRWHTK 239
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 291
>gi|385305996|gb|EIF49936.1| 60s ribosomal protein l3 [Dekkera bruxellensis AWRI1499]
Length = 389
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/303 (66%), Positives = 249/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKRA++ RG ++AFPKDD +KP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKFSEPRHGSLGFLPRKRASQQRGHIRAFPKDDKTKPVHLTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PGS +HK+E EA T+++TP ++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 NRPGSNVHKREIVEAATVVDTPELVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKK+AF KYS++Y G I+ +L ++KKY SVVRVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKRAFAKYSEKYAN--GAADIETELARVKKYCSVVRVLVHTQIRKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG++++KVD+A FEK +PVD VF++DE +D+I VT+G GYEGV R+G T+
Sbjct: 178 LAEIQLNGGSVSDKVDWAKEHFEKTVPVDTVFEQDESVDVIAVTRGHGYEGVTHRYGTTK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRG RKVACIG WHP+ V++ VAR+GQNGYHHRT +N KVY++GK G E+ +G T
Sbjct: 238 LPRKTHRGARKVACIGPWHPSHVNWAVARSGQNGYHHRTSVNNKVYRVGKAGDEA-SGST 296
Query: 321 EFD 323
+FD
Sbjct: 297 DFD 299
>gi|170041842|ref|XP_001848658.1| 60S ribosomal protein L3 [Culex quinquefasciatus]
gi|167865417|gb|EDS28800.1| 60S ribosomal protein L3 [Culex quinquefasciatus]
Length = 452
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/292 (64%), Positives = 241/292 (82%), Gaps = 1/292 (0%)
Query: 20 RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD 79
+MSHRKF PRHGS+ F P+KRA+RH+G++KAFPKDDP+KP LTA+L YKAGMTHIVR+
Sbjct: 37 KMSHRKFSAPRHGSMAFYPKKRASRHQGRIKAFPKDDPTKPVHLTAYLAYKAGMTHIVRE 96
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
++PGSK++KKE EAVTI+ETPP+++VG VGY++TP G R+L VWAQHLSEE RRRFY
Sbjct: 97 ADRPGSKINKKEVVEAVTILETPPIVIVGAVGYIETPFGPRALCNVWAQHLSEECRRRFY 156
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
KNW SKKKAFTK SK++ D GKKSI+ +K+ +Y +RV+AH+QIR +K QKKA
Sbjct: 157 KNWHVSKKKAFTKASKKWTDDLGKKSIEDNFKKMIRYCKFIRVIAHSQIRLIKQ-GQKKA 215
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H++EIQ+NGGTI +KV++ EK +PV VF +DEM+D + VTKGKG++GV +RW
Sbjct: 216 HIIEIQLNGGTIEDKVNWVKEHLEKPVPVADVFGQDEMVDCVAVTKGKGFKGVTSRWHTK 275
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 276 KLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGYHHRTEINKKIYRIGAG 327
>gi|114660361|ref|XP_001160309.1| PREDICTED: ribosomal protein L3-like [Pan troglodytes]
Length = 407
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/291 (64%), Positives = 237/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP+MVVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLMVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK++++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRG 290
>gi|313227808|emb|CBY22957.1| unnamed protein product [Oikopleura dioica]
Length = 403
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 185/292 (63%), Positives = 242/292 (82%), Gaps = 2/292 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSL FLP+KR R RG++K+FPKDD SKP LTAF+G+KAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSLKFLPKKRCTRPRGQIKSFPKDDASKPIHLTAFMGFKAGMTHVVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGS ++KKE EAVTI+ETPP+ V+G+ GY++TP G RS+ TVWA H+S+E +RRFY+
Sbjct: 61 EKPGSAINKKEVVEAVTIVETPPLKVIGLTGYIETPDGPRSIKTVWANHISDEAKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W SKKKAFTK SK++E+++GKKSI+ + IKKY+ VR + HTQ++ + L+QKKAH
Sbjct: 121 SWYSSKKKAFTKASKRWESEDGKKSIERDIAMIKKYSKNVRAICHTQMKGL-SLRQKKAH 179
Query: 201 LMEIQVNGGT-IAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
++EIQ+NGG IA+KVD+A FEK++ V+ VF + EMID+IG+TKG+GY GV +RW
Sbjct: 180 IIEIQINGGNGIADKVDWATSNFEKEVSVNTVFSEAEMIDVIGITKGRGYHGVTSRWHTK 239
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+LPRKTH+GLRKVACIGAWHP+RV+F+VAR+GQ GYHHRTE+NKKVY++G G
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPSRVAFSVARSGQKGYHHRTEINKKVYRVGAG 291
>gi|320586035|gb|EFW98714.1| 60S ribosomal protein L3 [Grosmannia clavigera kw1407]
Length = 442
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/285 (67%), Positives = 238/285 (83%), Gaps = 3/285 (1%)
Query: 39 RKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTI 98
RKR+A HRG+VK+FPKDDP KP LTA LGYKAGMT IVRD+++PG+K HKKE EAVTI
Sbjct: 69 RKRSASHRGRVKSFPKDDPKKPVHLTATLGYKAGMTTIVRDLDRPGAKSHKKEVVEAVTI 128
Query: 99 IETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYE 158
++TPPM+VVG+VGY++TPRGLRSL TVWA+HL +E++RRFYKNW KSKKKAFTKY+K++
Sbjct: 129 VDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLGDELKRRFYKNWYKSKKKAFTKYAKKHS 188
Query: 159 TDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYA 218
+G SI ++E+IKKY +VVRVLAHTQIRK LKQKKAHLMEIQ+NGG+ A+KV++
Sbjct: 189 ESKG-VSITREIERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQINGGSTADKVEFG 246
Query: 219 YGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 278
G FEK VD++F++DE+ID+I VTKG G+EGV RWG +LPRKTH+GLRKVACIGAW
Sbjct: 247 QGLFEKPFSVDSIFEQDEVIDVIAVTKGHGFEGVTARWGTKKLPRKTHKGLRKVACIGAW 306
Query: 279 HPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
HPA V +TVARAGQ GYHHRT +N K+Y++GKGG + + T+ D
Sbjct: 307 HPAHVQWTVARAGQRGYHHRTSVNHKIYRIGKGGSDDNAS-TDLD 350
>gi|360044569|emb|CCD82117.1| putative 60s ribosomal protein L3 [Schistosoma mansoni]
Length = 419
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/293 (65%), Positives = 239/293 (81%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E E VTI+E PPM++VG+VGY T +GLR+ TVWA+HL+EE +RRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEEFKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WCKSKK+AF K SK++ + G I+ L+KIKKY +VVR +AHTQ+R MK +QKK+H
Sbjct: 121 DWCKSKKRAFLKSSKKWLCEAGLAQIKRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+QVNGGT+++KVD+ FEKQI V VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEVQVNGGTVSQKVDWIRQHFEKQISVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKK+YK+G G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYKIGMGLQ 292
>gi|256079531|ref|XP_002576040.1| 60S ribosomal protein L3 [Schistosoma mansoni]
Length = 419
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/293 (65%), Positives = 239/293 (81%), Gaps = 1/293 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E E VTI+E PPM++VG+VGY T +GLR+ TVWA+HL+EE +RRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEEFKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WCKSKK+AF K SK++ + G I+ L+KIKKY +VVR +AHTQ+R MK +QKK+H
Sbjct: 121 DWCKSKKRAFLKSSKKWLCEAGLAQIKRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+QVNGGT+++KVD+ FEKQI V VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEVQVNGGTVSQKVDWIRQHFEKQISVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKK+YK+G G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYKIGMGLQ 292
>gi|255717332|ref|XP_002554947.1| 60S ribosomal protein L3 [Lachancea thermotolerans]
gi|238936330|emb|CAR24510.1| KLTH0F17556p [Lachancea thermotolerans CBS 6340]
Length = 388
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/303 (67%), Positives = 249/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA RGKV++FPKDD SK LT+FLGYKAGM+ IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGKVRSFPKDDKSKSVALTSFLGYKAGMSTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPPM+VVGVVGYV+TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D +I+ +L +I KYA+VVRVLAHTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--AIERELARISKYATVVRVLAHTQVRKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+ A+KV +A FEK + VD+VF+++EMID+ VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSTADKVAWAREHFEKTVSVDSVFEQNEMIDVCAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ G+H RT +N KVY++GKGG E + T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGFHTRTSINHKVYRVGKGGDEGNAS-T 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|442753801|gb|JAA69060.1| Putative ribosomal protein [Ixodes ricinus]
Length = 390
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/278 (67%), Positives = 237/278 (85%), Gaps = 1/278 (0%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+GF+P+KR+ R RGKVKAFPKDDP+KP LTAFLG+KAGMTHIVR+V+KPGSK++KKE
Sbjct: 1 MGFVPKKRSKRLRGKVKAFPKDDPTKPIHLTAFLGFKAGMTHIVREVDKPGSKVNKKEVV 60
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
E VTI+E PPMM+VG+VGY++TP+GLR+ TVWA+HLSEE RRRFYKNW KSKKKAFTK
Sbjct: 61 EPVTILEVPPMMIVGLVGYIETPKGLRAFKTVWAEHLSEECRRRFYKNWYKSKKKAFTKS 120
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
SK+++ D GK+ I+ L+K+KKY V+RVLAHTQ++ M+ +QKKAH+MEIQVNGG++
Sbjct: 121 SKKWQEDLGKQEIERDLKKMKKYCKVIRVLAHTQMKLMR-RRQKKAHIMEIQVNGGSVGA 179
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
K+ +A EK + V VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KIKWAREHLEKPVTVSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
CIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 CIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGQG 277
>gi|241859209|ref|XP_002416193.1| ribosomal protein L3, putative [Ixodes scapularis]
gi|215510407|gb|EEC19860.1| ribosomal protein L3, putative [Ixodes scapularis]
Length = 390
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/278 (67%), Positives = 237/278 (85%), Gaps = 1/278 (0%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+GF+P+KR+ R RGKVKAFPKDDP+KP LTAFLG+KAGMTHIVR+V+KPGSK++KKE
Sbjct: 1 MGFVPKKRSKRLRGKVKAFPKDDPTKPIHLTAFLGFKAGMTHIVREVDKPGSKVNKKEVV 60
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
E VTI+E PPMM+VG+VGY++TP+GLR+ TVWA+HLSEE RRRFYKNW KSKKKAFTK
Sbjct: 61 EPVTILEVPPMMIVGLVGYIETPKGLRAFKTVWAEHLSEECRRRFYKNWYKSKKKAFTKS 120
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
SK+++ D GK+ I+ L+K+KKY V+RVLAHTQ++ M+ +QKKAH+MEIQVNGG++
Sbjct: 121 SKKWQEDLGKQEIERDLKKMKKYCKVIRVLAHTQMKLMR-RRQKKAHIMEIQVNGGSVGA 179
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
K+ +A EK + V VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KIKWAREHLEKPVTVSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
CIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 CIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGQG 277
>gi|346469559|gb|AEO34624.1| hypothetical protein [Amblyomma maculatum]
Length = 390
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/278 (67%), Positives = 236/278 (84%), Gaps = 1/278 (0%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+GF+P+KR+ R RGKVKAFPKDDP+KP LTAFLG+KAGMTHIVR+V+KPGSK++KKE
Sbjct: 1 MGFVPKKRSKRIRGKVKAFPKDDPTKPIHLTAFLGFKAGMTHIVREVDKPGSKVNKKEVV 60
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
E VTI+ETPPMM+VGVVGY++TP+GLR+ TVWA+HLSEE RRRFYKNW KSKKKAFTK
Sbjct: 61 EPVTILETPPMMIVGVVGYIETPKGLRAFKTVWAEHLSEECRRRFYKNWYKSKKKAFTKS 120
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
K+++ D G++ I+ +K+KKY V+RVLAHTQ++ M +QKKAH+MEIQVNGGT+
Sbjct: 121 CKRWQEDLGRQEIERDFKKMKKYCKVIRVLAHTQMKLMH-RRQKKAHIMEIQVNGGTVGA 179
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
K+ +A EK +PV VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KIKWAREHLEKPVPVSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
CIGAWHP+RV FTVARAGQ G+HHRTE+NKK+Y++G+G
Sbjct: 240 CIGAWHPSRVQFTVARAGQKGFHHRTEINKKIYRIGQG 277
>gi|260790238|ref|XP_002590150.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae]
gi|229275339|gb|EEN46161.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae]
Length = 404
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/291 (68%), Positives = 244/291 (83%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR R +GKVKAFPKDD SKP LTAF+GYKAGMTH++R+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRAKGKVKAFPKDDASKPPHLTAFMGYKAGMTHVLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+ G+K K+E +AVTIIETPPM+VVGVVGY+ TP+G R+ T++A+HLSEE RRRFYK
Sbjct: 61 ERTGAKSTKREVVDAVTIIETPPMVVVGVVGYIATPKGRRAFRTIFAEHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAFTKY+K+++ D+GKK I+ +++KKY +RV+ HTQ++ + +QKK+H
Sbjct: 121 NWYSSKKKAFTKYAKKWQDDDGKKQIEKDFKQMKKYCINIRVIVHTQMKDLPH-RQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGTIAEKVD+A EKQIPV VF +DEMIDIIG+TKGKG++GV +RWG +
Sbjct: 180 IMEIQVNGGTIAEKVDWAREHLEKQIPVSQVFGQDEMIDIIGITKGKGFKGVTSRWGTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV + VARAGQ GY+HRTE+NKKVY++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYGVARAGQKGYNHRTEINKKVYRVGTG 290
>gi|375332089|gb|AFA52584.1| ribosomal protein L3 superfamily protein [Vaucheria litorea]
Length = 395
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/303 (66%), Positives = 249/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PR GSLGFLP+KR +H GK+++FP DDPSK C LTAF+ YKAGMTHIVR+V
Sbjct: 1 MSHRKFEAPRKGSLGFLPKKRTKKHFGKIRSFPHDDPSKECHLTAFMAYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSKLHKKET E VTI+E PPM+VVGVVGY +TP GL+++ +VWA HLS+E RRR YK
Sbjct: 61 ERPGSKLHKKETVEPVTILECPPMVVVGVVGYKETPNGLKTVVSVWAGHLSDECRRRMYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAFT Y+K++ E + I+ L+KIKK+ VVRV+AHTQ+ +K L+ KKAH
Sbjct: 121 NWHSSKKKAFTAYAKKFA--EKPEEIERDLKKIKKHCQVVRVIAHTQVGLVK-LRVKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGT+ EKVD+A G FE+ +P+ +VF KDE ID++G TKG G +GVV RWGVTR
Sbjct: 178 IMEIQVNGGTVEEKVDFAKGLFERHVPISSVFSKDECIDVLGATKGHGTKGVVARWGVTR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
L RKTHRGLRKVACIG+WHPARV+F+VARAGQ+GYHHRTE+NKK+Y++G+ G E + T
Sbjct: 238 LARKTHRGLRKVACIGSWHPARVAFSVARAGQHGYHHRTEINKKIYRIGQKGDEG-SCTT 296
Query: 321 EFD 323
E D
Sbjct: 297 EAD 299
>gi|339247749|ref|XP_003375508.1| 60S ribosomal protein L3 [Trichinella spiralis]
gi|316971123|gb|EFV54952.1| 60S ribosomal protein L3 [Trichinella spiralis]
Length = 405
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/305 (62%), Positives = 250/305 (81%), Gaps = 9/305 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
+SHRKF PRHG +GFLP+KR+ RHRGKVK+FPKDDP KP LTAF+GYKAGMTHIVR+V
Sbjct: 17 VSHRKFSAPRHGHVGFLPKKRSKRHRGKVKSFPKDDPQKPVHLTAFIGYKAGMTHIVREV 76
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVG--VVGYVKTPRGLRSLNTVWAQHLSEEVRRRF 138
+KPGSK++KK+ EAVT++ETPPM++VG VVGY++TP+GLR+ T+WA+HLS++ +RR+
Sbjct: 77 DKPGSKINKKDVVEAVTVLETPPMVIVGKCVVGYIETPQGLRAFKTIWAEHLSDDCKRRY 136
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
K ++KAFTK SK+++ + G K IQ ++ KY V+RV+AHTQ+ K+ QKK
Sbjct: 137 -----KCERKAFTKASKKWQDEAGVKEIQTDFARMIKYCKVIRVIAHTQM-KLLHHGQKK 190
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+MEIQ+NGGTI EKV++A EKQ+PVD+VF +DEMID IGVTKGKG++GV +RW
Sbjct: 191 AHIMEIQLNGGTIEEKVNWAREHLEKQVPVDSVFARDEMIDCIGVTKGKGFKGVTSRWHT 250
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
+LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE+NKK+Y++GKG + + G
Sbjct: 251 KKLPRKTHKGLRKVACIGAWHPSRVRYTVARAGQKGYHHRTEINKKIYRIGKGADKKN-G 309
Query: 319 ITEFD 323
TE+D
Sbjct: 310 STEYD 314
>gi|384483788|gb|EIE75968.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
Length = 384
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/298 (67%), Positives = 246/298 (82%), Gaps = 4/298 (1%)
Query: 26 FEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 85
+ PRHG LGF PRKR HRG+VKA+PKDD KP LTAF+GYKAGMTHIVRD+E+PGS
Sbjct: 3 MQSPRHGHLGFGPRKRTRSHRGRVKAYPKDDAKKPVHLTAFMGYKAGMTHIVRDLERPGS 62
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKS 145
K+HKKE EAVT+IE P M+VVGVVGYV+TPRGLRSL TVWA+HLSEE +RRFYKNW +S
Sbjct: 63 KMHKKEIVEAVTVIEVPAMVVVGVVGYVETPRGLRSLTTVWAEHLSEEAKRRFYKNWYRS 122
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
KKKAFTKY+++Y EG K + +LE+IKKY SVVRV+AHTQI K K L Q+KAH+MEIQ
Sbjct: 123 KKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHTQISKAK-LHQRKAHIMEIQ 179
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
+NGG++ +KVD+A FEK++ V ++F++DEMIDII TKG G+EGV RWG +LPRKT
Sbjct: 180 LNGGSVEQKVDWAREHFEKEVTVGSIFEQDEMIDIIATTKGHGFEGVTHRWGTKKLPRKT 239
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
HRGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKK+Y++ G ++ +G TE+D
Sbjct: 240 HRGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIYRIATGA-DAKSGTTEYD 296
>gi|258565167|ref|XP_002583328.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704]
gi|237907029|gb|EEP81430.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704]
Length = 383
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/289 (65%), Positives = 237/289 (82%), Gaps = 3/289 (1%)
Query: 35 GFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCE 94
LP + V +FPKDDP KP LTA +GYKAGMT VRD+E+PG+K+HKKE E
Sbjct: 6 ALLPSCHGSAVPDTVASFPKDDPKKPVHLTAAMGYKAGMTTTVRDLERPGAKMHKKEIVE 65
Query: 95 AVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYS 154
AVT++ETPPM+ VGVVGY++TPRGLRSL TVWA+HLS+E++RRFYKNW KSKKKAFTKY+
Sbjct: 66 AVTVVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYKNWYKSKKKAFTKYA 125
Query: 155 KQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEK 214
K Y ++G S+ +LE+IKKY +VVR+LAHTQIRK LKQKKAHLMEIQVNGG+IA+K
Sbjct: 126 KNYSENKGA-SVTRELERIKKYCTVVRLLAHTQIRKTP-LKQKKAHLMEIQVNGGSIADK 183
Query: 215 VDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 274
V++A+G FEK I +D++F++DEMID+I VTKG G++GV +RWG +LPRKTH+GLRKVAC
Sbjct: 184 VEFAHGLFEKPIEIDSIFEQDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVAC 243
Query: 275 IGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
IGAWHP+ V +TVARAGQ+GYHHRT +N K+Y++GKG E + T+FD
Sbjct: 244 IGAWHPSHVQWTVARAGQDGYHHRTSVNHKIYRIGKGSDEGNAS-TDFD 291
>gi|449475910|ref|XP_002187558.2| PREDICTED: 60S ribosomal protein L3-like [Taeniopygia guttata]
Length = 407
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/291 (67%), Positives = 242/291 (83%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVKA+PKDDPSKP LTAFLGYKAGMTH VR+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKAWPKDDPSKPVHLTAFLGYKAGMTHTVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTIIETPPM+VVGVVGY++TP+GLR+ TV+A+H+S+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIIETPPMVVVGVVGYIETPKGLRNFKTVFAEHISDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ + GK+ ++ +KKY V+RV+ HTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEAGKRQLEKDFAAMKKYCKVIRVIMHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKVD+ EKQI V +VF ++EMID+IGVTKG G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVDWVRERLEKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTEINKKIYRIGHG 290
>gi|224004980|ref|XP_002296141.1| RL3, ribosomal protein 3, 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
gi|209586173|gb|ACI64858.1| RL3, ribosomal protein 3, 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
Length = 395
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/297 (65%), Positives = 250/297 (84%), Gaps = 4/297 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKD-DPSKPCRLTAFLGYKAGMTHIVRD 79
MSHRKFE PRHG+LGFLP+KR H G++++FPKD D S P LTAF YKAGMTH+VR
Sbjct: 1 MSHRKFEAPRHGNLGFLPKKRTKHHSGRIRSFPKDNDASAPPHLTAFRAYKAGMTHVVRG 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
V++PG+ +HK+E +AV+I+ETPPM+VVGVVGY++TPRGLR+L TV+A+HLSEE +RR Y
Sbjct: 61 VDRPGAVMHKREVVDAVSILETPPMVVVGVVGYLETPRGLRTLTTVFAEHLSEEFKRRAY 120
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
KNW KSK+KA+TKY+K+Y ++GK I+ +LE+I K+ VVRV+ H+Q++K+ L+ +KA
Sbjct: 121 KNWYKSKRKAYTKYAKKYTENDGK-DIEKELERIAKHCKVVRVITHSQVKKLH-LRIRKA 178
Query: 200 HLMEIQVNGGTIAE-KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
H+ME+Q+NGG A+ KVD+A FEK++ VD+VF KDE+ID++GVTKG GYEGV TRWGV
Sbjct: 179 HIMEVQINGGADAKAKVDFAKSLFEKEVTVDSVFAKDELIDVLGVTKGHGYEGVTTRWGV 238
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES 315
+RLPRKTHRGLRKVACIG+WHPARVS TV RAGQNGYHHRTEMNKK+Y++GK G S
Sbjct: 239 SRLPRKTHRGLRKVACIGSWHPARVSDTVPRAGQNGYHHRTEMNKKIYRIGKKGDNS 295
>gi|448087719|ref|XP_004196395.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
gi|359377817|emb|CCE86200.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
Length = 389
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 254/303 (83%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVSLTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLSEE++RRFYK
Sbjct: 61 DRPGSKVHKREIVEAATVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D + ++ +L +IKKYASVVRVL HTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDATQ--VERELARIKKYASVVRVLVHTQIKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG+I++KVD+A FEK + VD+VF+++EM+D I VTKG+G EGV RWG +
Sbjct: 178 LAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMVDAIAVTKGRGIEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIG+WHPA V ++V RAGQ+GYHHRT +N KVY++G G ES+ G T
Sbjct: 238 LPRKTHRGLRKVACIGSWHPANVQWSVPRAGQDGYHHRTSINHKVYRVGSGEDESN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|219121047|ref|XP_002185755.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582604|gb|ACI65225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 389
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/294 (66%), Positives = 247/294 (84%), Gaps = 2/294 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKFE PRHGSLGFLP+KR H G++++FP+DD ++ LTAF GYKAGMTH+VR V+
Sbjct: 1 SHRKFEAPRHGSLGFLPKKRTKYHSGRIRSFPRDDAAEQPHLTAFRGYKAGMTHVVRGVD 60
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PG+ +HK+E +AV+I+ETPPM+VVGVVGYV+TP GLR+L TV+ +HLSEE +RR YKN
Sbjct: 61 RPGALMHKREVVDAVSIVETPPMVVVGVVGYVETPSGLRTLTTVFTEHLSEEFKRRCYKN 120
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W SKKKA+TKY+ +Y+ D G K I+ +LE+IKK+ SVVRV+AH+Q++K+ L+ KKAH+
Sbjct: 121 WYNSKKKAYTKYALKYQKD-GGKDIENELERIKKFCSVVRVIAHSQVKKL-NLRIKKAHI 178
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGG A KVD+A FEK++ VD++F KDE ID++GVT+G GYEGV TRWGV+RL
Sbjct: 179 MEIQVNGGDTAAKVDFAKNLFEKEVTVDSIFAKDEQIDVLGVTRGHGYEGVTTRWGVSRL 238
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES 315
PRKTHRGLRKVACIG+WHPARVS TV RAGQNGY HRTEMNKKVY++GK G E+
Sbjct: 239 PRKTHRGLRKVACIGSWHPARVSTTVPRAGQNGYFHRTEMNKKVYRVGKKGDEA 292
>gi|443896762|dbj|GAC74105.1| inorganic phosphate transporter [Pseudozyma antarctica T-34]
Length = 525
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/274 (68%), Positives = 232/274 (84%), Gaps = 3/274 (1%)
Query: 50 KAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGV 109
+ FPKDDP KP LTA +GYKAGMTHIVRD+++PGSK+HKKE EAVT+IETPPM+ VGV
Sbjct: 164 RNFPKDDPKKPVHLTAMIGYKAGMTHIVRDLDRPGSKMHKKEIVEAVTVIETPPMVAVGV 223
Query: 110 VGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQ 169
VGYV+TPRGLRSL TVWA+HLS+EV+RRFYKNW +SKKKAFTKY+K++ + G SI +
Sbjct: 224 VGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYRSKKKAFTKYAKKHSENNG-SSISRE 282
Query: 170 LEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVD 229
LE+IKKY +VVRVLAHTQ+RK GLKQKK+HLMEIQ+NGG++A+KVD+A FEK V
Sbjct: 283 LERIKKYCTVVRVLAHTQVRKT-GLKQKKSHLMEIQINGGSVADKVDFAKEHFEKTFDVK 341
Query: 230 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 289
+VF+++E+ID+I VTKG GYEGV RWG +LPRKTHRGLRK+ACIGAWHPA V FTVAR
Sbjct: 342 SVFEQNEIIDVIAVTKGHGYEGVTARWGTKKLPRKTHRGLRKIACIGAWHPANVMFTVAR 401
Query: 290 AGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
+GQ+GYHHRTE+ KK+Y++ G++ +G T+FD
Sbjct: 402 SGQDGYHHRTEIGKKIYRIS-NGEDKTSGSTDFD 434
>gi|156082902|ref|XP_001608935.1| ribosomal protein L3 [Babesia bovis T2Bo]
gi|154796185|gb|EDO05367.1| ribosomal protein L3, putative [Babesia bovis]
Length = 393
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/293 (64%), Positives = 231/293 (78%), Gaps = 5/293 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PR G+LGF P+KR RGK+++FPKDDP+KP TAF+GYKAGMTH+ +
Sbjct: 1 MSHRKFERPRSGNLGFFPKKRCKSQRGKIRSFPKDDPTKPPHFTAFMGYKAGMTHVTHEP 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKK+T EAVTIIETPPM+VVG+VGY++TPRGLR L TVWA HLS+E RRRFYK
Sbjct: 61 DKPGSKLHKKDTVEAVTIIETPPMIVVGLVGYIETPRGLRVLTTVWAGHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + K I +I Y +VVR + HTQ K L KKA
Sbjct: 121 NWYKSKKKAFTKYAKKFAETKMSKDI----SRIVNYCTVVRAICHTQPSKTP-LSMKKAF 175
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
++EIQVNGGT+ EKVDY FE+ +PV+AVF +EM+D++GVTKG G +GV++R+GVTR
Sbjct: 176 IIEIQVNGGTVQEKVDYVTKMFEQPLPVNAVFASNEMVDVLGVTKGHGMKGVISRFGVTR 235
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPRKTHRGLRKVACIG+WHPARV F V R+GQ GY HRTE NKK+Y+LG G
Sbjct: 236 LPRKTHRGLRKVACIGSWHPARVQFQVPRSGQKGYFHRTERNKKIYRLGLGSN 288
>gi|363751473|ref|XP_003645953.1| hypothetical protein Ecym_4055 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889588|gb|AET39136.1| hypothetical protein Ecym_4055 [Eremothecium cymbalariae
DBVPG#7215]
Length = 387
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/303 (68%), Positives = 255/303 (84%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS++++RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDDLKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D +++ +L ++KKYA+V+RVLAHTQIRK L QK+AH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQD--GTAVEKELARMKKYATVIRVLAHTQIRKTP-LAQKRAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FEK + VD+VF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVSVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N K+Y++GKG E + T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKIYRIGKGDDEGNAA-T 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>gi|366992279|ref|XP_003675905.1| hypothetical protein NCAS_0C05510 [Naumovozyma castellii CBS 4309]
gi|342301770|emb|CCC69541.1| hypothetical protein NCAS_0C05510 [Naumovozyma castellii CBS 4309]
Length = 387
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 252/303 (83%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHG LGFLPRKRA RG+VK+FPKDD +KP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGHLGFLPRKRAVSVRGRVKSFPKDDKTKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D + I+ +L +I+KYASVVRVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAE--IEKELARIRKYASVVRVLVHTQVRKTP-LVQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FEK + VDAVF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDAVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAGQ GYHHRT +N KVY++GKG +S+ T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQRGYHHRTSINHKVYRIGKGDDDSNAS-T 296
Query: 321 EFD 323
FD
Sbjct: 297 NFD 299
>gi|18606060|gb|AAH22790.1| Unknown (protein for IMAGE:3538792), partial [Homo sapiens]
Length = 374
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/262 (70%), Positives = 230/262 (87%), Gaps = 1/262 (0%)
Query: 50 KAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGV 109
K+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ETPPM+VVG+
Sbjct: 1 KSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGI 60
Query: 110 VGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQ 169
VGYV+TPRGLR+ TV+A+H+S+E +RRFYKNW KSKKKAFTKY K+++ ++GKK ++
Sbjct: 61 VGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKD 120
Query: 170 LEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVD 229
+KKY V+RV+AHTQ+R + L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+
Sbjct: 121 FSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVN 179
Query: 230 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 289
VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VAR
Sbjct: 180 QVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVAR 239
Query: 290 AGQNGYHHRTEMNKKVYKLGKG 311
AGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 AGQKGYHHRTEINKKIYKIGQG 261
>gi|296424388|ref|XP_002841730.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637978|emb|CAZ85921.1| unnamed protein product [Tuber melanosporum]
Length = 640
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/282 (66%), Positives = 237/282 (84%), Gaps = 4/282 (1%)
Query: 42 AARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIET 101
+A+ RGKVK+FPKDD KP LTA LGYKAGMT IVRD+++PG+K+HKKE EAVT+IET
Sbjct: 272 SAQTRGKVKSFPKDDTKKPVHLTAALGYKAGMTTIVRDLDRPGAKMHKKEVVEAVTVIET 331
Query: 102 PPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDE 161
PPM++VGVVGYV+TPRGLRSL TVWA+HLS++++RRFYKNW KSKKKAFTKY+K++ E
Sbjct: 332 PPMVIVGVVGYVETPRGLRSLTTVWAEHLSDDLKRRFYKNWYKSKKKAFTKYAKRH-AGE 390
Query: 162 GKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGF 221
G K+I +L +IKKY +VVRVLAH+QIRK LKQKK HLMEIQVNGG+I +KVD+A+
Sbjct: 391 G-KAISHELGRIKKYCTVVRVLAHSQIRKTP-LKQKKTHLMEIQVNGGSITDKVDFAFSH 448
Query: 222 FEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 281
FEK++ + ++F++DEMID+I VTKG G+ GV +RWG +LPRKTH+GLRKVACIGAWHP+
Sbjct: 449 FEKEVTISSIFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPS 508
Query: 282 RVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
V +TVARAGQ+GYHHRT +N K+Y++G G E + TEFD
Sbjct: 509 HVQWTVARAGQDGYHHRTSVNHKIYRIGSGTDEGNAS-TEFD 549
>gi|326929147|ref|XP_003210731.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo]
Length = 407
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/291 (65%), Positives = 242/291 (83%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +PKDDPSKP LTAF+GYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPIHLTAFMGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG ++ K+E EAVTIIETPPM+VVGVVGY+ TP+GLR+ TV+A+H+S+E RRRFYK
Sbjct: 61 HRPGLRISKREEVEAVTIIETPPMVVVGVVGYIDTPKGLRNFKTVFAEHISDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+ HTQ+ K+ L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFAAMKKYCKVIRVIMHTQM-KLLPLRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEK+D+ EKQI V +VF ++EMID+IGVTKG G +GV +RW +
Sbjct: 180 VMEIQLNGGTVAEKIDWVRERLEKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHSKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++VARAGQ GYHHRTE+NKK++++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYSVARAGQKGYHHRTELNKKIFRIGRG 290
>gi|399215964|emb|CCF72652.1| unnamed protein product [Babesia microti strain RI]
Length = 416
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/317 (62%), Positives = 239/317 (75%), Gaps = 32/317 (10%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPR GSLGFLPRKR R RGK+++FPKDD SKP L AF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRRGSLGFLPRKRCRRQRGKIRSFPKDDQSKPTHLCAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EAVTIIE PPM+VVG+VGY+++ RGLR L+TVWA HLS+E +RRFYK
Sbjct: 61 DKPGSKLHKKEVVEAVTIIECPPMIVVGLVGYIES-RGLRVLSTVWAGHLSDECKRRFYK 119
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYSK++ T ++++L +IK Y +VVR + HTQ K + +K+H
Sbjct: 120 NWYKSKKKAFTKYSKKFITTR----MESELARIKNYCTVVRAICHTQPSKT-SIGLRKSH 174
Query: 201 LMEIQVNGGTIAEK--------------------------VDYAYGFFEKQIPVDAVFQK 234
+MEIQVNGGT+AEK VD+ FE+ +P+ VF++
Sbjct: 175 IMEIQVNGGTVAEKWQPVRPVVRKTMKLPNHTTYKTKLTQVDFVVSLFEQPVPISTVFEE 234
Query: 235 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNG 294
+EMID I VTKG G +GVV+R+GVTRLPRKTHRGLRKVACIGAWHPARV F VARAGQ G
Sbjct: 235 NEMIDTIAVTKGHGVKGVVSRYGVTRLPRKTHRGLRKVACIGAWHPARVQFQVARAGQKG 294
Query: 295 YHHRTEMNKKVYKLGKG 311
Y HRTE NKK+Y++G G
Sbjct: 295 YFHRTERNKKIYRIGLG 311
>gi|410078898|ref|XP_003957030.1| hypothetical protein KAFR_0D02480 [Kazachstania africana CBS 2517]
gi|372463615|emb|CCF57895.1| hypothetical protein KAFR_0D02480 [Kazachstania africana CBS 2517]
Length = 387
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/303 (67%), Positives = 251/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHG LGFLPRKRA RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGHLGFLPRKRAVSVRGRVKSFPKDDQSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++ P ++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDAPAVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D +I+ +L +++KYA+V+RVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSTKYAQDGA--AIEKELARLRKYATVIRVLVHTQVRKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EK+D+A FEK + VD+VF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKIDWAREHFEKTVSVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N K+Y++GKG E++ T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKIYRIGKGDDEANAS-T 296
Query: 321 EFD 323
FD
Sbjct: 297 SFD 299
>gi|47218047|emb|CAG11452.1| unnamed protein product [Tetraodon nigroviridis]
Length = 388
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 180/290 (62%), Positives = 241/290 (83%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHG GFLP KR+ +HRG+V+++PKDD S+P LTAFLGYKAGMTH +R+V+
Sbjct: 1 SHRKFHAPRHGHTGFLPHKRSKKHRGRVRSWPKDDTSRPVHLTAFLGYKAGMTHTLREVQ 60
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+ G K K+E EAVTIIETPP++V GVVGY++T GLRS T++A+HLS+E +RRFY+N
Sbjct: 61 RVGLKQSKREEVEAVTIIETPPVIVFGVVGYIRTVHGLRSFKTLFAEHLSDECKRRFYRN 120
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKYS++++ G+K + ++E++KKY SV+RV+ HTQ+R + + QKK+H+
Sbjct: 121 WYKSKKKAFTKYSRKWQDQTGRKQLDKEIEQMKKYCSVIRVIVHTQMRLLP-ISQKKSHI 179
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
ME+Q+NGG+I++KVD+A E+ +PV AVF +DEMIDIIGV+KG G++GV +RW +L
Sbjct: 180 MEVQLNGGSISDKVDWAREHLERAVPVSAVFCQDEMIDIIGVSKGHGFKGVTSRWHTKKL 239
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTH+GLRKVACIGAWHPARV +T+ARAGQ GYHHRTE+NKK++++GKG
Sbjct: 240 PRKTHKGLRKVACIGAWHPARVGYTIARAGQKGYHHRTEINKKIFRIGKG 289
>gi|444320033|ref|XP_004180673.1| hypothetical protein TBLA_0E00930 [Tetrapisispora blattae CBS 6284]
gi|387513716|emb|CCH61154.1| hypothetical protein TBLA_0E00930 [Tetrapisispora blattae CBS 6284]
Length = 387
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 251/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA RG+VK+FPKDD SK LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKAVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D SI+ +L +I KYASVVRVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDPA--SIERELARITKYASVVRVLVHTQIRKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L E+Q+NGG+IA+KV +A FEK + VD+VF+++E+ID++ VTKG G+EGV RWG R
Sbjct: 178 LAEVQLNGGSIADKVQWAKEHFEKTVSVDSVFEQNELIDVVAVTKGHGFEGVTHRWGTKR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIG WHPA V ++VARAGQNGYHHRT +N KVY++GK G E+ +G T
Sbjct: 238 LPRKTHRGLRKVACIGPWHPAHVMWSVARAGQNGYHHRTSINHKVYRVGKAGDEA-SGAT 296
Query: 321 EFD 323
FD
Sbjct: 297 NFD 299
>gi|50755665|ref|XP_414843.1| PREDICTED: ribosomal protein L3-like [Gallus gallus]
Length = 407
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/291 (65%), Positives = 240/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KF PRHG LGFLP KR+ RHRGKVK +PKDDPSKP LTAF+GYKAGMTH +R+V
Sbjct: 1 MSHHKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFMGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG ++ K+E EAVTIIETPPM+VVGVVGY+ TP+GLR+ TV+A+H+S+E RRRFYK
Sbjct: 61 HRPGLRISKREEVEAVTIIETPPMVVVGVVGYIDTPKGLRNFKTVFAEHISDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+ HTQ+ K+ L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFAAMKKYCKVIRVIMHTQM-KLLPLRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKVD+ EKQI V +VF ++EMID+IGVTKG G +GV +RW +
Sbjct: 180 VMEIQLNGGTVAEKVDWVRERLEKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHSKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++VARAGQ GYHHRTE+NKK++++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYSVARAGQKGYHHRTELNKKIFRIGHG 290
>gi|365758431|gb|EHN00274.1| Rpl3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 387
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 250/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPP++VVG+VGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGIVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D ++ +L ++KKYASVVRVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GVERELARVKKYASVVRVLVHTQIRKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FEK I VD+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTIAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KVY++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKVYRVGKGDDEAN-GAT 296
Query: 321 EFD 323
FD
Sbjct: 297 SFD 299
>gi|156849033|ref|XP_001647397.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM
70294]
gi|156118083|gb|EDO19539.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM
70294]
Length = 387
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 251/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA RG+VK+FPKDD SK LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKAVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+EVRRRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAF+KYS +Y D +I+ +L +IKKYASVVRVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFSKYSTKYAQDGA--AIERELARIKKYASVVRVLVHTQVRKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FEK + VD+VF+++EMID++ VTKG G+EGV RWG R
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIG WHPA V ++VARAGQ GYHHRT +N KVY++GKG E++ T
Sbjct: 238 LPRKTHRGLRKVACIGPWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGEDEANAA-T 296
Query: 321 EFD 323
FD
Sbjct: 297 SFD 299
>gi|6324637|ref|NP_014706.1| ribosomal 60S subunit protein L3 [Saccharomyces cerevisiae S288c]
gi|2507307|sp|P14126.4|RL3_YEAST RecName: Full=60S ribosomal protein L3; AltName: Full=Maintenance
of killer protein 8; AltName: Full=RP1; AltName:
Full=Trichodermin resistance protein; AltName: Full=YL1
gi|315113528|pdb|3O58|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113573|pdb|3O5H|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|365767253|pdb|3U5E|B Chain B, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome A
gi|365767294|pdb|3U5I|B Chain B, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome B
gi|410562480|pdb|4B6A|B Chain B, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex
With Arx1 And Rei1
gi|1420207|emb|CAA99256.1| TCM1 [Saccharomyces cerevisiae]
gi|2104875|emb|CAA94548.1| YOR29-14 [Saccharomyces cerevisiae]
gi|151945689|gb|EDN63930.1| ribosomal protein L3 [Saccharomyces cerevisiae YJM789]
gi|190407398|gb|EDV10665.1| ribosomal protein L3 [Saccharomyces cerevisiae RM11-1a]
gi|256269309|gb|EEU04617.1| Rpl3p [Saccharomyces cerevisiae JAY291]
gi|259149545|emb|CAY86349.1| Rpl3p [Saccharomyces cerevisiae EC1118]
gi|285814949|tpg|DAA10842.1| TPA: ribosomal 60S subunit protein L3 [Saccharomyces cerevisiae
S288c]
gi|323302848|gb|EGA56652.1| Rpl3p [Saccharomyces cerevisiae FostersB]
gi|323307150|gb|EGA60433.1| Rpl3p [Saccharomyces cerevisiae FostersO]
gi|323331453|gb|EGA72868.1| Rpl3p [Saccharomyces cerevisiae AWRI796]
gi|323335592|gb|EGA76876.1| Rpl3p [Saccharomyces cerevisiae Vin13]
gi|323346509|gb|EGA80796.1| Rpl3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352260|gb|EGA84796.1| Rpl3p [Saccharomyces cerevisiae VL3]
gi|349581226|dbj|GAA26384.1| K7_Rpl3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763295|gb|EHN04825.1| Rpl3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296394|gb|EIW07496.1| Rpl3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 387
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/303 (69%), Positives = 250/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D I+ +L +IKKYASVVRVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FEK + VD+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEAN-GAT 296
Query: 321 EFD 323
FD
Sbjct: 297 SFD 299
>gi|315113303|pdb|3IZS|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
Length = 388
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/303 (69%), Positives = 250/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D I+ +L +IKKYASVVRVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FEK + VD+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEAN-GAT 296
Query: 321 EFD 323
FD
Sbjct: 297 SFD 299
>gi|449269423|gb|EMC80192.1| 60S ribosomal protein L3-like protein, partial [Columba livia]
Length = 407
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/290 (66%), Positives = 240/290 (82%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHG LGFLP KR+ RHRGKVK +PKDDPSKP LTAFLGYKAGMTH VR+V
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFLGYKAGMTHTVREVH 61
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PG KL K+E EAVTIIETPPM+VVGVVGYV+TP+GLR+ TV+A+H+S+E RRRFYKN
Sbjct: 62 RPGLKLSKREEVEAVTIIETPPMVVVGVVGYVETPKGLRNFKTVFAEHISDECRRRFYKN 121
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY K+++ ++GK+ ++ +KKY V+RV+ HTQ+ K+ L+QKKAH+
Sbjct: 122 WHKSKKKAFTKYCKKWQDEDGKRQLEKDFAAMKKYCKVIRVIVHTQM-KLLPLRQKKAHV 180
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQ+NGGT+ EKVD+ EKQ+ V +VF ++EMID+IGVTKG G +GV +RW +L
Sbjct: 181 MEIQLNGGTVPEKVDWVRERLEKQVSVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHTKKL 240
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTELNKKIYRIGHG 290
>gi|443922217|gb|ELU41693.1| 60S ribosomal protein L3 [Rhizoctonia solani AG-1 IA]
Length = 381
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/263 (69%), Positives = 227/263 (86%), Gaps = 2/263 (0%)
Query: 54 KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYV 113
+DDP KP LTA +GYKAGMTHIVRD+++PGSK+HK+E EAV+IIETPP++VVGVVGYV
Sbjct: 27 QDDPKKPVHLTATMGYKAGMTHIVRDLDRPGSKMHKREVVEAVSIIETPPLIVVGVVGYV 86
Query: 114 KTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKI 173
+TPRGLR+L TVWA HLS+EV+RRFYKNW +SKKKAFT+Y+K+ + G KS Q +LE+I
Sbjct: 87 ETPRGLRTLTTVWANHLSDEVKRRFYKNWYRSKKKAFTRYAKK-AAENGGKSTQRELERI 145
Query: 174 KKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQ 233
KKY +VVRVLAHTQIRK GLKQKKAHLMEIQVNGG+IA+KV +A+G FEK + V VF+
Sbjct: 146 KKYCTVVRVLAHTQIRKT-GLKQKKAHLMEIQVNGGSIADKVAFAHGLFEKPVEVSTVFE 204
Query: 234 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 293
+DE++D+I VTKG G+EGV RWG +LPRKTH+GLRKVACIGAWHP++V F+VARAGQ+
Sbjct: 205 QDEVVDVIAVTKGHGFEGVTARWGTKKLPRKTHKGLRKVACIGAWHPSKVMFSVARAGQD 264
Query: 294 GYHHRTEMNKKVYKLGKGGQESH 316
GYHHRTE+NKK+Y++G G ++
Sbjct: 265 GYHHRTELNKKIYRIGLGSDAAN 287
>gi|345317852|ref|XP_001514408.2| PREDICTED: 60S ribosomal protein L3 [Ornithorhynchus anatinus]
Length = 378
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/263 (68%), Positives = 228/263 (86%), Gaps = 1/263 (0%)
Query: 51 AFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVV 110
AF +DDP+KP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ETPPM++VG+V
Sbjct: 6 AFYQDDPTKPIHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIV 65
Query: 111 GYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQL 170
GYV+TPRGLR+ T++A+H+S+E +RRFYKNW KSKKKAFTKY K+++ +EGKK ++
Sbjct: 66 GYVQTPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEEGKKQLEKDF 125
Query: 171 EKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDA 230
+KKY V+RV+AHTQ+R + L+QKK+HLMEIQVNGG+IAEKVD+A E+Q+PV
Sbjct: 126 NSMKKYCQVIRVIAHTQMRVLP-LRQKKSHLMEIQVNGGSIAEKVDWAREKLEQQVPVAT 184
Query: 231 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARA 290
VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARA
Sbjct: 185 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARA 244
Query: 291 GQNGYHHRTEMNKKVYKLGKGGQ 313
GQ GYHHRTE+NKK+YK+G+G Q
Sbjct: 245 GQKGYHHRTEINKKIYKIGQGYQ 267
>gi|50288047|ref|XP_446452.1| 60S ribosomal protein L3 [Candida glabrata CBS 138]
gi|74661344|sp|Q6FTJ2.1|RL3_CANGA RecName: Full=60S ribosomal protein L3
gi|49525760|emb|CAG59379.1| unnamed protein product [Candida glabrata]
Length = 387
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/303 (68%), Positives = 251/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y + + I+ +L +IKKYA+VVRVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQNGAE--IERELARIKKYATVVRVLVHTQVRKTP-LVQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FEK + VD+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y++GKG E + T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGKGDDEGNAA-T 296
Query: 321 EFD 323
FD
Sbjct: 297 NFD 299
>gi|290991133|ref|XP_002678190.1| ribosomal protein L3 [Naegleria gruberi]
gi|284091801|gb|EFC45446.1| ribosomal protein L3 [Naegleria gruberi]
Length = 416
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/306 (63%), Positives = 237/306 (77%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRK+A R RG+VKAFPKDD K LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKKARRERGRVKAFPKDDQKKATHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
KPGSK+HKKE +AVTIIE PPM+VVGVVGY +TP GL+++ TVWA+++S E RR +YK
Sbjct: 61 NKPGSKMHKKEGLDAVTIIEAPPMVVVGVVGYKQTPTGLKAIGTVWAKNISNEFRRVYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WC+SKK+AFTK +K Y ++ LE KK A V+R++AHTQ K+ KKAH
Sbjct: 121 DWCRSKKRAFTKLTKTYLEQAAQEKRTQALESFKKNADVIRIVAHTQPSKVTATNNKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ EIQVNGGT+ EK+ +A EK + VD+VF KDE ID+I V+KGKG +GVV+RWGV R
Sbjct: 181 VAEIQVNGGTVDEKIKFAVANLEKLVSVDSVFAKDEPIDVIAVSKGKGTKGVVSRWGVRR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH---T 317
LPRKTHRGLRKVACIGAWHPARVSF+VARAGQ G+ HR NKK+Y++GK + +
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFSVARAGQKGFFHRVHQNKKIYRIGKSNKTEEGKKS 300
Query: 318 GITEFD 323
+T+FD
Sbjct: 301 AMTDFD 306
>gi|149620465|ref|XP_001511933.1| PREDICTED: 60S ribosomal protein L3-like [Ornithorhynchus anatinus]
Length = 342
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/291 (64%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRG+VK++PKDDP KP LTAFLGYKAGMTH +R+V
Sbjct: 8 MSHRKFSAPRHGHLGFLPHKRSRRHRGRVKSWPKDDPKKPVHLTAFLGYKAGMTHTLREV 67
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPPM+VVGVVGYV TPRGLR+ T++A+HLS+E RRRFYK
Sbjct: 68 HRPGLKVSKREEVEAVTIVETPPMVVVGVVGYVDTPRGLRNFKTIFAEHLSDECRRRFYK 127
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ +GKK ++ +KKY ++RV+ HTQ+ K+ +QKKA
Sbjct: 128 NWHKSKKKAFTKYCKKWQDADGKKRLEKDFASMKKYCKIIRVIVHTQM-KLLAFRQKKAD 186
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+Q+NGG++++KVD+A G EK +PV AVF ++EM+D+I VTKG+G +GV +RW +
Sbjct: 187 VMEVQLNGGSVSDKVDWARGHLEKAVPVQAVFSQNEMVDVIAVTKGRGMKGVTSRWHAKK 246
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKK+Y+LG+G
Sbjct: 247 LPRKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTEINKKIYRLGRG 297
>gi|49258841|pdb|1S1I|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is
In File 1s1h
Length = 386
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/302 (69%), Positives = 249/302 (82%), Gaps = 4/302 (1%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRK+E PRHG LGFLPRKRAA R +VKAFPKDD SKP LT+FLGYKAGMT IVRD++
Sbjct: 1 SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLD 60
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYKN
Sbjct: 61 RPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 120
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKYS +Y D I+ +L +IKKYASVVRVL HTQIRK L QKKAHL
Sbjct: 121 WYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAHL 177
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
EIQ+NGG+I+EKVD+A FEK + VD+VF+++EMID I VTKG G+EGV RWG +L
Sbjct: 178 AEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKL 237
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITE 321
PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GKG E++ G T
Sbjct: 238 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEAN-GATS 296
Query: 322 FD 323
FD
Sbjct: 297 FD 298
>gi|145324164|ref|NP_001077671.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193833|gb|AEE31954.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
Length = 306
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/210 (86%), Positives = 203/210 (96%)
Query: 114 KTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKI 173
KTPRGLRSLNTVWAQHLSEEVRRRFYKNW KSKKKAFT Y+KQY++++GKK IQAQLEK+
Sbjct: 11 KTPRGLRSLNTVWAQHLSEEVRRRFYKNWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKM 70
Query: 174 KKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQ 233
KKYA+V+RVLAHTQIRKMKGLKQKKAH+MEIQ+NGGTIA+KVD+AY FFEKQIP++AVFQ
Sbjct: 71 KKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQ 130
Query: 234 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 293
KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQN
Sbjct: 131 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQN 190
Query: 294 GYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
GYHHRTE+NKK+Y+LGK G E+HT +TE+D
Sbjct: 191 GYHHRTELNKKIYRLGKVGTEAHTAMTEYD 220
>gi|449017686|dbj|BAM81088.1| 60S ribosomal protein L3 [Cyanidioschyzon merolae strain 10D]
Length = 390
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/305 (62%), Positives = 243/305 (79%), Gaps = 8/305 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDD-PSKPCRLTAFLGYKAGMTHIVRD 79
MSHRK+E PRHGSLGFLPR R RHRG+V+++P+D P+ P LTAF KAG TH+VR
Sbjct: 1 MSHRKYEAPRHGSLGFLPRGRTKRHRGRVRSWPRDPGPAVPPHLTAFPVVKAGCTHVVRQ 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
+++PGSK+HKKE E VTI+E PP+++ G+VGY +TPRGLR++ TV+A+HL++EV+RRFY
Sbjct: 61 IDRPGSKVHKKEVAEPVTILEAPPIVICGIVGYSETPRGLRAIRTVFAEHLNDEVKRRFY 120
Query: 140 KNWCKSKKKAFTKYS-KQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
KNW ++KKKAFTKY+ +Y E + L+ I+++ SVVRV+AHTQ RK + L+QKK
Sbjct: 121 KNWYRAKKKAFTKYALAKYSMGEYRND----LDTIRRHCSVVRVIAHTQQRKFR-LRQKK 175
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH++EIQ+NGGTI EKVD+A EK + +D V DEM+D IGVT+GKG+EGVVTR+GV
Sbjct: 176 AHILEIQINGGTIPEKVDFAERLLEKTVSIDDVISNDEMVDTIGVTRGKGFEGVVTRFGV 235
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
RLPRKTHRGLRKVACIGAWHPARV FTV RAGQ GYHHRT+MN KVY++GK G + +
Sbjct: 236 RRLPRKTHRGLRKVACIGAWHPARVQFTVPRAGQRGYHHRTQMNLKVYRIGKKG-DGKSA 294
Query: 319 ITEFD 323
TE+D
Sbjct: 295 TTEYD 299
>gi|347970122|ref|XP_313303.5| AGAP003556-PA [Anopheles gambiae str. PEST]
gi|333468788|gb|EAA08849.5| AGAP003556-PA [Anopheles gambiae str. PEST]
Length = 404
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/278 (66%), Positives = 229/278 (82%), Gaps = 1/278 (0%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+ F P+KRA+RH+G+VKAFPKDD SKP LTAFL YKAGMTHIVR+ ++PGSK++KKE
Sbjct: 1 MAFYPKKRASRHQGRVKAFPKDDASKPVHLTAFLAYKAGMTHIVREADRPGSKINKKEVV 60
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
EAVTI+ETPP++VVG VGY++TP G R+L VWAQHLSEE RRRFYKNW SKKKAFTK
Sbjct: 61 EAVTILETPPLVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYKNWHASKKKAFTKA 120
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
SK++ D GKKSI+ +K+ +Y +RV+AH+QIR +K QKKAH++EIQ+NGG+IA+
Sbjct: 121 SKKWTDDLGKKSIEDTFKKMVRYCKFIRVIAHSQIRLIKQ-GQKKAHIIEIQLNGGSIAD 179
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
KV++ EK IPV VF +DEMID + VTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KVNWVKEHLEKPIPVSQVFSQDEMIDCVAVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
CIGAWHP+RV+FTVARAGQ GYHHRTE+NKK+Y+LG G
Sbjct: 240 CIGAWHPSRVAFTVARAGQKGYHHRTELNKKIYRLGAG 277
>gi|406605586|emb|CCH43019.1| 60S ribosomal protein L3 [Wickerhamomyces ciferrii]
Length = 389
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/303 (67%), Positives = 254/303 (83%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA RG+VK+FP+DD +KP LTA LGYKAGM+ IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAASIRGRVKSFPRDDKTKPVHLTATLGYKAGMSTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+ +Y G++ I+ +L +I KYA+VVRVL HTQ++K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYAAKYANKNGEQ-IERELARITKYATVVRVLVHTQVKKTP-LVQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGG+IA+KV++A FEK + VD+V +++E ID+I VTKG G+EGV RWG TR
Sbjct: 179 LAEIQVNGGSIADKVNWAREHFEKTVSVDSVIEQNENIDVIAVTKGHGFEGVTHRWGTTR 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHP+ V +TVARAGQNGYH RT +N KVY++G+G E++ T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSHVQWTVARAGQNGYHSRTSINHKVYRVGRGDDEANAA-T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|414585655|tpg|DAA36226.1| TPA: hypothetical protein ZEAMMB73_366909 [Zea mays]
Length = 545
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 211/275 (76%), Gaps = 45/275 (16%)
Query: 49 VKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVG 108
VK+FP+DDP KPC LTAFLGYKAGMTHIV V
Sbjct: 230 VKSFPRDDPKKPCHLTAFLGYKAGMTHIV-----------------------------VR 260
Query: 109 VVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQA 168
TPRGLR+LN+VWAQHLSEEVRRRFYKNWCKSKKKAF+KY+ +Y++D GKK IQ
Sbjct: 261 SRSLAPTPRGLRTLNSVWAQHLSEEVRRRFYKNWCKSKKKAFSKYALKYDSDAGKKEIQL 320
Query: 169 QLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPV 228
QLEKI RKMKGLKQKKAHLMEIQVNGGTIA+KVDY Y FFE ++PV
Sbjct: 321 QLEKI---------------RKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFE-EVPV 364
Query: 229 DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVA 288
DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVA
Sbjct: 365 DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVA 424
Query: 289 RAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
RAGQNGYHHRTEMNKKVYK+GK GQESH TEFD
Sbjct: 425 RAGQNGYHHRTEMNKKVYKIGKAGQESHDASTEFD 459
>gi|334333850|ref|XP_001366065.2| PREDICTED: 60S ribosomal protein L3-like [Monodelphis domestica]
Length = 431
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/292 (65%), Positives = 239/292 (81%), Gaps = 1/292 (0%)
Query: 20 RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD 79
R+SHRKF PRHG LGFLP+KR+ RHRGKVK +P+DDPSKP LTAFLGYKAGMTH +R+
Sbjct: 23 RISHRKFSAPRHGHLGFLPQKRSRRHRGKVKTWPRDDPSKPVHLTAFLGYKAGMTHTLRE 82
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
V +PG K+ K+E EAVTI+ETPP++VVG+VGYV TPRGLRS T++A+HLS+E RRRFY
Sbjct: 83 VHRPGLKISKREEVEAVTIVETPPVIVVGIVGYVATPRGLRSFKTIFAEHLSDECRRRFY 142
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
KNW KSKKKAFTK +++ D+GKK +Q +KKY V+RV+ HTQ+ K+ +QKKA
Sbjct: 143 KNWYKSKKKAFTKACQKWRDDDGKKRLQKDFASMKKYCKVIRVIVHTQM-KLLPFRQKKA 201
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+MEIQ+NGGTIAEKV++A EKQ+ V VF + E+ID+I VTKG+G +GV +RW
Sbjct: 202 HIMEIQLNGGTIAEKVEWARARLEKQVSVHTVFSQSEVIDVIAVTKGRGMKGVTSRWHAK 261
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+LPRKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 262 KLPRKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTELNKKIYRIGHG 313
>gi|71032875|ref|XP_766079.1| 60S ribosomal protein L3 [Theileria parva strain Muguga]
gi|68353036|gb|EAN33796.1| 60S ribosomal protein L3, putative [Theileria parva]
Length = 384
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/303 (64%), Positives = 242/303 (79%), Gaps = 6/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PR GSLGFLP+KR+ HR K+++FP DDP+KP LTAF+GYKAGMTH+V +V
Sbjct: 1 MSHRKFERPRSGSLGFLPKKRSRTHRAKIRSFPSDDPAKPPHLTAFVGYKAGMTHVVTEV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSKLHKKE EAVT++ETPPM+ VG+VGYV+TPRGL+ L TVWA HLS+E+RRRFYK
Sbjct: 61 DRPGSKLHKKEVVEAVTVVETPPMVCVGLVGYVETPRGLKVLGTVWAGHLSDELRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ + ++ +L++I+ YA+VVR L HTQ K L +KAH
Sbjct: 121 NWYKSKKKAFTKYAKKF----AETGMEQELKRIRNYATVVRALMHTQPSKT-SLSLRKAH 175
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+E+QVNGGT EKV Y G FEK +PV VF ++EM+D++GVTKG G +GVV+R+GVTR
Sbjct: 176 LLEVQVNGGTTDEKVSYVVGLFEKSVPVSTVFGENEMLDVLGVTKGHGVKGVVSRYGVTR 235
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIG+WHPARV F V R GQ GYH RTE NKK+Y+LG G + G T
Sbjct: 236 LPRKTHRGLRKVACIGSWHPARVQFQVPRHGQKGYHKRTERNKKIYRLGL-GSSARNGST 294
Query: 321 EFD 323
+ D
Sbjct: 295 DSD 297
>gi|284073158|gb|ADB77818.1| 60S ribosomal protein L3 [Entransia fimbriata]
Length = 236
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/236 (77%), Positives = 212/236 (89%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
KFEH RHGSLGFLPRKR+ R RGKVK+FP+DDP+KP LTAF+GYKAGMTHI+RDV+KPG
Sbjct: 1 KFEHARHGSLGFLPRKRSKRIRGKVKSFPRDDPTKPPGLTAFMGYKAGMTHIMRDVDKPG 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
SKLHKKE CEAVTIIE PP++VVG+VGYVKTPRGLRSL TVWAQHLSEEV RRFYKN+ K
Sbjct: 61 SKLHKKEACEAVTIIEAPPIVVVGLVGYVKTPRGLRSLVTVWAQHLSEEVIRRFYKNYAK 120
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
SKKKAFTKY KQY+ EGKK + QLE++KKY V+RVLAHTQ++K+KG++QKKAH+MEI
Sbjct: 121 SKKKAFTKYRKQYDNPEGKKDVDKQLERMKKYCQVIRVLAHTQVKKVKGIRQKKAHIMEI 180
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
QVNGG++AEKVD+ +FEK IP+DAVF KDEM+DIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 QVNGGSVAEKVDFGVKYFEKAIPIDAVFNKDEMVDIIGVTRGHGYEGVVTRWGVTR 236
>gi|1197059|gb|AAA88732.1| ribosomal protein L3 [Saccharomyces cerevisiae]
Length = 387
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/303 (69%), Positives = 249/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y D I+ +L +IKKYASVVRVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FEK + VD+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGA HPA V ++VARAGQ GYH RT +N K+Y++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGACHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEAN-GAT 296
Query: 321 EFD 323
FD
Sbjct: 297 SFD 299
>gi|301769703|ref|XP_002920231.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca]
Length = 444
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/308 (62%), Positives = 244/308 (79%), Gaps = 7/308 (2%)
Query: 4 PALEHNESVAAAAQRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRL 63
P+L + AA MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P L
Sbjct: 27 PSLSDLQGPAA------MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHL 80
Query: 64 TAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLN 123
TAFLGYKAGMTH +R+V +PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS
Sbjct: 81 TAFLGYKAGMTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFK 140
Query: 124 TVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVL 183
T++A+HLS+E RRRFYK+W KSKKKAFTK K++ +GKK +Q L +KKY V+RV+
Sbjct: 141 TIFAEHLSDECRRRFYKDWHKSKKKAFTKACKRWRDADGKKQLQRDLAAMKKYCKVIRVI 200
Query: 184 AHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGV 243
HTQ+ K+ +QKKAH+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I V
Sbjct: 201 VHTQM-KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAV 259
Query: 244 TKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNK 303
TKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NK
Sbjct: 260 TKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNK 319
Query: 304 KVYKLGKG 311
K+Y++G+G
Sbjct: 320 KIYRIGRG 327
>gi|312385734|gb|EFR30160.1| hypothetical protein AND_00422 [Anopheles darlingi]
Length = 405
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/296 (61%), Positives = 236/296 (79%), Gaps = 7/296 (2%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+ F P+KRA+RH+G++KAFPKDDP+KP LTAFL YKAGMTHIVR+ ++PGSK++KKE
Sbjct: 1 MAFYPKKRASRHQGRIKAFPKDDPTKPVHLTAFLAYKAGMTHIVREADRPGSKINKKEVL 60
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
EAVTI+ETPP++VVG VGY++TP G R+L VWAQHLSEE RRRFYKNW +KKKAFTK
Sbjct: 61 EAVTILETPPIVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYKNWHSAKKKAFTKA 120
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
SK++ D GKKSI+ +K+ +Y +RV+AH+QIR +K QKKAH++EIQ+NGG++ +
Sbjct: 121 SKKWTDDLGKKSIEDTFKKMIRYCKFIRVIAHSQIRMVKQ-GQKKAHIIEIQLNGGSVED 179
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
KV++ EK IPV VF +DEMID + VTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KVNWVKEHLEKPIPVSQVFSQDEMIDCVAVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE------SHTGITEFD 323
CIGAWHP+RV+FTVARAGQ GYHHRTE+NKK+Y++G G ++G TE+D
Sbjct: 240 CIGAWHPSRVAFTVARAGQKGYHHRTELNKKIYRIGAGIHSKDGKIVKNSGSTEYD 295
>gi|401623590|gb|EJS41683.1| rpl3p [Saccharomyces arboricola H-6]
Length = 387
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/303 (68%), Positives = 250/303 (82%), Gaps = 4/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA R +VKAFPKDD SK LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDKSKAVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYS +Y EG I+ +L +IKKYASVVRVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKY-AQEG-AGIERELARIKKYASVVRVLVHTQVRKTP-LVQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+++EKVD+A FEK + VD+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSVSEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEAN-GAT 296
Query: 321 EFD 323
FD
Sbjct: 297 NFD 299
>gi|410985373|ref|XP_003998997.1| PREDICTED: 60S ribosomal protein L3-like [Felis catus]
Length = 407
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/291 (64%), Positives = 238/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR++RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSSRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W +SKKKAFTK K++ EGKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHRSKKKAFTKACKRWRDAEGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|145475213|ref|XP_001423629.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145532966|ref|XP_001452233.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390690|emb|CAK56231.1| unnamed protein product [Paramecium tetraurelia]
gi|124419921|emb|CAK84836.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/303 (60%), Positives = 235/303 (77%), Gaps = 5/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHG+LGF PRKR HRG+++AFPKD+ S P LTAF G+KAGMTHI+R V
Sbjct: 1 MSHRKFEAPRHGNLGFTPRKRTKHHRGRIRAFPKDNKSSPVHLTAFAGFKAGMTHILRTV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSKL+ KE EAVTI+ETPP+ VVG+VGY++TPRGLR+L TVW+ ++++ RRFYK
Sbjct: 61 ERPGSKLNGKEVVEAVTIVETPPLAVVGIVGYIETPRGLRALTTVWSTKIAKDTLRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAFT Y+K + K+++ QL++I KY VVRV+ HTQ+ K+ L+QKK H
Sbjct: 121 NWINSKKKAFTNYNK---ANAEPKNLETQLKRIVKYCQVVRVIVHTQMSKL-NLRQKKNH 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ E+QVNGGT +KV+YA G EK++ VD VF+++E ID++GVTKGKG GV+ R+GV
Sbjct: 177 VFEVQVNGGTTEQKVNYAKGLLEKEVKVDQVFKQNEQIDVLGVTKGKGVAGVIKRFGVKH 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
L +KTHRG R+V CIG WHPA V ++VAR GQ GYHHRTEMNKK+Y++G G + +T T
Sbjct: 237 LQKKTHRGWRRVGCIGGWHPANVRYSVARTGQLGYHHRTEMNKKIYRIGAAG-DKNTAST 295
Query: 321 EFD 323
E D
Sbjct: 296 EAD 298
>gi|402907275|ref|XP_003916403.1| PREDICTED: 60S ribosomal protein L3-like [Papio anubis]
Length = 407
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/291 (64%), Positives = 237/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|300797628|ref|NP_001178518.1| 60S ribosomal protein L3-like [Rattus norvegicus]
Length = 407
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/291 (64%), Positives = 238/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK++P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKSWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|78369254|ref|NP_001030578.1| 60S ribosomal protein L3-like [Bos taurus]
gi|88932612|sp|Q3SZ10.3|RL3L_BOVIN RecName: Full=60S ribosomal protein L3-like
gi|74267896|gb|AAI03273.1| Ribosomal protein L3-like [Bos taurus]
gi|296473512|tpg|DAA15627.1| TPA: 60S ribosomal protein L3-like [Bos taurus]
Length = 407
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 238/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+Q+NGGT+AEKV +A EKQ+PV +VF ++E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|348584788|ref|XP_003478154.1| PREDICTED: 60S ribosomal protein L3-like [Cavia porcellus]
Length = 417
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/297 (64%), Positives = 239/297 (80%), Gaps = 1/297 (0%)
Query: 15 AAQRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMT 74
AA R SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMT
Sbjct: 5 AALLPRPSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMT 64
Query: 75 HIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEV 134
H +R+V +PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E
Sbjct: 65 HTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVTTPRGLRSFKTIFAEHLSDEC 124
Query: 135 RRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGL 194
RRRFYK+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+
Sbjct: 125 RRRFYKDWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPF 183
Query: 195 KQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVT 254
+QKKAH+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +
Sbjct: 184 RQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTS 243
Query: 255 RWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 244 RWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 300
>gi|281500833|pdb|3JYW|C Chain C, Structure Of The 60s Proteins For Eukaryotic Ribosome
Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome
At 8.9a Resolution
Length = 362
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/299 (69%), Positives = 246/299 (82%), Gaps = 4/299 (1%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K+E PRHG LGFLPRKRAA R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+++PG
Sbjct: 1 KYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPG 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
SK HK+E EAVT+++TPP++VVGVVGYV+TPRGLRSL TVWA+HLS+EV+RRFYKNW K
Sbjct: 61 SKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYK 120
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
SKKKAFTKYS +Y D I+ +L +IKKYASVVRVL HTQIRK L QKKAHL EI
Sbjct: 121 SKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAHLAEI 177
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
Q+NGG+I+EKVD+A FEK + VD+VF+++EMID I VTKG G+EGV RWG +LPRK
Sbjct: 178 QLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRK 237
Query: 265 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
THRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GKG E++ G T FD
Sbjct: 238 THRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEAN-GATSFD 295
>gi|403220923|dbj|BAM39056.1| ribosomal protein L3 [Theileria orientalis strain Shintoku]
Length = 419
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/326 (58%), Positives = 236/326 (72%), Gaps = 40/326 (12%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PR GSLGFLP+KR+ HR K+++FPKDD S P LTAF GYKAGMTH+V +V
Sbjct: 1 MSHRKFERPRSGSLGFLPKKRSRTHRAKIRSFPKDDVSAPPHLTAFAGYKAGMTHVVTEV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EAVTI+ETPPM+VVG+VGYV+TP+GL+ L TVWA HLS+EVRRRFYK
Sbjct: 61 DKPGSKLHKKEVVEAVTIVETPPMVVVGLVGYVETPKGLKVLGTVWAGHLSDEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW K+K+KAFTKY+K++ + ++ +L +++ YA+VVR L HTQ K L +KAH
Sbjct: 121 NWYKAKRKAFTKYAKRF----AETKMENELSRLRNYATVVRALMHTQPSKT-SLSLRKAH 175
Query: 201 LMEIQVNGGT-----------------------------------IAEKVDYAYGFFEKQ 225
L+E+QVNGGT + +KV++ FEK
Sbjct: 176 LLEVQVNGGTTEDKVRMRIQWATMSIDDSYFPVSGLMLIKHNSCIVDDKVNFVVNLFEKT 235
Query: 226 IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSF 285
+PV AVF ++EM+D++GVTKG G +GVV R+GVTRLPRKTHRGLRKVACIG+WHPARV F
Sbjct: 236 VPVSAVFSENEMLDVVGVTKGHGVKGVVARFGVTRLPRKTHRGLRKVACIGSWHPARVQF 295
Query: 286 TVARAGQNGYHHRTEMNKKVYKLGKG 311
V R GQ GYH RTE NKK+Y+LG G
Sbjct: 296 QVPRHGQMGYHKRTERNKKIYRLGSG 321
>gi|351711301|gb|EHB14220.1| 60S ribosomal protein L3-like protein [Heterocephalus glaber]
Length = 407
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 237/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++++HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFSEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWYKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|189053728|dbj|BAG35980.1| unnamed protein product [Homo sapiens]
Length = 407
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/291 (64%), Positives = 236/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++ VGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVAVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK++++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRG 290
>gi|281341592|gb|EFB17176.1| hypothetical protein PANDA_008982 [Ailuropoda melanoleuca]
Length = 407
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/290 (65%), Positives = 237/290 (81%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREVH 61
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK+
Sbjct: 62 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 121
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTK K++ +GKK +Q L +KKY V+RV+ HTQ+ K+ +QKKAH+
Sbjct: 122 WHKSKKKAFTKACKRWRDADGKKQLQRDLAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 180
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|4826988|ref|NP_005052.1| 60S ribosomal protein L3-like [Homo sapiens]
gi|397472395|ref|XP_003807730.1| PREDICTED: 60S ribosomal protein L3-like [Pan paniscus]
gi|426380751|ref|XP_004057025.1| PREDICTED: 60S ribosomal protein L3-like [Gorilla gorilla gorilla]
gi|2500230|sp|Q92901.3|RL3L_HUMAN RecName: Full=60S ribosomal protein L3-like
gi|1638884|gb|AAC50777.1| ribosomal protein L3-like [Homo sapiens]
gi|30046542|gb|AAH50413.1| Ribosomal protein L3-like [Homo sapiens]
gi|119606005|gb|EAW85599.1| ribosomal protein L3-like [Homo sapiens]
Length = 407
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 237/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK++++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRG 290
>gi|355756447|gb|EHH60055.1| 60S ribosomal protein L3-like protein [Macaca fascicularis]
Length = 425
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 237/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
+SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 11 LSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 70
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 71 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 130
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 131 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 189
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 190 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 249
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 250 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 300
>gi|403273327|ref|XP_003928470.1| PREDICTED: 60S ribosomal protein L3-like [Saimiri boliviensis
boliviensis]
Length = 407
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 237/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GK+ +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKEQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|332240032|ref|XP_003269194.1| PREDICTED: 60S ribosomal protein L3-like [Nomascus leucogenys]
Length = 407
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/291 (64%), Positives = 237/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPVVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|255653009|ref|NP_001157417.1| ribosomal protein L3-like isoform 1 [Mus musculus]
Length = 407
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 237/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK++P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKSWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV + EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|326437430|gb|EGD83000.1| 60S ribosomal protein L3 [Salpingoeca sp. ATCC 50818]
Length = 398
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/298 (63%), Positives = 239/298 (80%), Gaps = 1/298 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLP+KR HRG+V++FP+D+ LTAF+GYKAGMTHIVR++
Sbjct: 1 MSHRKFRAPRHGSLGFLPKKRTKHHRGRVRSFPRDNKEDKPHLTAFIGYKAGMTHIVREM 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ GSK HKKE EAVT++ETPPM+ VG+VGYV+TPRGLR L TV+A ++SE RRFYK
Sbjct: 61 DRTGSKAHKKEVVEAVTVVETPPMVGVGIVGYVETPRGLRQLTTVFAGNMSETCMRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N+ KSKKK F+KY + +T+EGKK+ + QL ++ KY +V+RV+AHT+I + L+QKKAH
Sbjct: 121 NYVKSKKKQFSKYFARLKTEEGKKNFEDQLRRLAKYCTVIRVIAHTKIDVL-NLRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGGT AEKV +A G E+ IPV VF +DE ID++G +KG+G+EGV RWG R
Sbjct: 180 IMEIQVNGGTPAEKVAFAKGLLEQDIPVGTVFVQDENIDVLGASKGRGFEGVTHRWGTKR 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
LPRKTH+GLRKVACIGAWHPA V ++VARAGQNGYHHRTEMNKK+Y +GKG + G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPANVQYSVARAGQNGYHHRTEMNKKIYMVGKGYHKDDKG 297
>gi|440913411|gb|ELR62861.1| 60S ribosomal protein L3-like protein, partial [Bos grunniens
mutus]
Length = 407
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/290 (64%), Positives = 237/290 (81%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 61
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK+
Sbjct: 62 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 121
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH+
Sbjct: 122 WHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 180
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
ME+Q+NGGT+AEKV +A EKQ+PV +VF ++E+ID+I VTKG+G +GV +RW +L
Sbjct: 181 MEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKL 240
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|149751051|ref|XP_001497954.1| PREDICTED: 60S ribosomal protein L3-like [Equus caballus]
Length = 407
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 236/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK +++ GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACRRWRDASGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|340503599|gb|EGR30155.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
Length = 388
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/296 (64%), Positives = 237/296 (80%), Gaps = 5/296 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PR GSLGF PR+R HRG+ +AFP+DD SK LTAF G+KAGMTHI+RDV
Sbjct: 1 MSHRKFEAPRRGSLGFRPRRRTRHHRGRCRAFPRDDASKKSHLTAFTGFKAGMTHILRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSK HKKE EAVT+IE PPM VVG+VGY+ TPRGLR+L TVW + L + +RRFYK
Sbjct: 61 ERPGSKNHKKEVVEAVTVIECPPMTVVGLVGYINTPRGLRALCTVWTKTLDKNTKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAFTK +ET+ +K + +IKKY +VVRV+AHT + K+ +QKK H
Sbjct: 121 NWTNSKKKAFTK----HETNFNQKEQDILINRIKKYCTVVRVIAHTNMNKL-NFRQKKNH 175
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
++EIQVNGGT+A+KV++A G FEK++ VD +FQ++EMID+IGVTKGKG+ GVV R+GV
Sbjct: 176 ILEIQVNGGTVAQKVEFAKGLFEKEVTVDQLFQENEMIDVIGVTKGKGFAGVVKRFGVKH 235
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
L +KTHRG RKV CIGAWHP+R+ FTVARAGQ GYHHRTE+NKKVY++GKG Q+++
Sbjct: 236 LQKKTHRGYRKVGCIGAWHPSRIRFTVARAGQLGYHHRTEINKKVYRVGKGDQKNN 291
>gi|291415728|ref|XP_002724100.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 407
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/291 (63%), Positives = 237/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS TV+A+HLS+E RRRFY+
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTVFAEHLSDECRRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W +SKKKAFTK +++ +GK+ +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHRSKKKAFTKACRRWRDADGKRQLQRDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|354478689|ref|XP_003501547.1| PREDICTED: 60S ribosomal protein L3-like [Cricetulus griseus]
Length = 407
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/291 (64%), Positives = 236/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK++P+DDP +P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKSWPRDDPKQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFY+
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDPSGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQAQLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|14336774|gb|AAK61301.1|AE006640_5 60S ribosomal protein L3 like [Homo sapiens]
Length = 406
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/290 (64%), Positives = 236/290 (81%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK+
Sbjct: 61 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH+
Sbjct: 121 WHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 179
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +L
Sbjct: 180 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 239
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK++++G+G
Sbjct: 240 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRG 289
>gi|431906679|gb|ELK10800.1| 60S ribosomal protein L3-like protein, partial [Pteropus alecto]
Length = 406
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/290 (64%), Positives = 235/290 (81%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK+
Sbjct: 61 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTK K++ GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH+
Sbjct: 121 WHKSKKKAFTKACKRWRDANGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 179
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +L
Sbjct: 180 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 239
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGQG 289
>gi|109127211|ref|XP_001082003.1| PREDICTED: 60S ribosomal protein L3-like [Macaca mulatta]
Length = 407
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/291 (64%), Positives = 236/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+N GT+A+KV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNVGTVADKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|353227573|emb|CCA78076.1| probable RPL3-60s ribosomal protein l3 [Piriformospora indica DSM
11827]
Length = 360
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/270 (68%), Positives = 231/270 (85%), Gaps = 2/270 (0%)
Query: 54 KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYV 113
KDDP KP LTA LGYKAGMTH+VRD+++PGSK+HK+E EAVTIIETPP++VVGVVGYV
Sbjct: 5 KDDPKKPVHLTATLGYKAGMTHVVRDLDRPGSKMHKREVVEAVTIIETPPLVVVGVVGYV 64
Query: 114 KTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKI 173
+TPRGLR+L TVWA HLSEE++RRFYKNW +SKKKAFTKY+K+ G+KS+ +LE+I
Sbjct: 65 ETPRGLRTLTTVWAAHLSEELKRRFYKNWYRSKKKAFTKYAKKMSEAAGQKSMDRELERI 124
Query: 174 KKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQ 233
+KY +VVRVLAHTQIRK GLKQKKAHLMEIQVNGG+I +KV +A G FE+++ V +F+
Sbjct: 125 RKYCTVVRVLAHTQIRKT-GLKQKKAHLMEIQVNGGSIPDKVAFARGLFEQEVAVSTIFE 183
Query: 234 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 293
+DE++D+IGVTKG G+EGV RWG +LPRKTH+GLRKVACIGAWHP++V F+VARAGQN
Sbjct: 184 QDEVVDVIGVTKGHGFEGVTARWGTKKLPRKTHKGLRKVACIGAWHPSKVMFSVARAGQN 243
Query: 294 GYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
GYHHRTE+NKK+Y++G GG + G T+ D
Sbjct: 244 GYHHRTELNKKIYRVGTGG-DCKNGATDAD 272
>gi|441617792|ref|XP_004092915.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3 [Nomascus
leucogenys]
Length = 375
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/263 (66%), Positives = 224/263 (85%), Gaps = 1/263 (0%)
Query: 49 VKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVG 108
+K+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+E PPM+VVG
Sbjct: 1 MKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVEAPPMVVVG 60
Query: 109 VVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQA 168
+VGYV+TPRGLR+ TV+A+H+S+E +RRFYKNW KSKKKAFTKY K+++ ++GKK ++
Sbjct: 61 IVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEK 120
Query: 169 QLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPV 228
+KKY V+RV+AHTQ+R + L+Q+ AHLMEIQVNGGT+AEK+D+A E+Q
Sbjct: 121 DFSSMKKYCQVIRVIAHTQMRLLP-LRQRXAHLMEIQVNGGTVAEKLDWARERLEQQYLX 179
Query: 229 DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVA 288
+ VF +DEMID+IG +GKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VA
Sbjct: 180 EPVFGQDEMIDVIGXDQGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 239
Query: 289 RAGQNGYHHRTEMNKKVYKLGKG 311
RAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 RAGQKGYHHRTEINKKIYKIGQG 262
>gi|344292026|ref|XP_003417729.1| PREDICTED: 60S ribosomal protein L3-like [Loxodonta africana]
Length = 579
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/296 (63%), Positives = 238/296 (80%), Gaps = 1/296 (0%)
Query: 16 AQRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH 75
AQ SHRKF PRHG LGFLP KR++RHRGKVK +P+DDPS+P LTAFLGYKAGMTH
Sbjct: 168 AQPPWSSHRKFSAPRHGHLGFLPHKRSSRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTH 227
Query: 76 IVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVR 135
+R+V +PG K+ K+E EAVTI+ETPP++VVGVVGYV T RGLRS T++A+HLS+E R
Sbjct: 228 TLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATTRGLRSFKTIFAEHLSDECR 287
Query: 136 RRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLK 195
RRFYK+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +
Sbjct: 288 RRFYKDWHKSKKKAFTKACKRWRDPDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFR 346
Query: 196 QKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 255
QKKAH+MEIQ+NGGT+AEKV +A + EKQ+PV +VF + E+ID+I VTKG+G +GV +R
Sbjct: 347 QKKAHIMEIQLNGGTVAEKVAWAQAWLEKQVPVHSVFSQSEIIDVIAVTKGRGIKGVTSR 406
Query: 256 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
W +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y +G+G
Sbjct: 407 WHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYCIGRG 462
>gi|395835745|ref|XP_003790833.1| PREDICTED: 60S ribosomal protein L3-like [Otolemur garnettii]
Length = 407
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/291 (64%), Positives = 235/291 (80%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+D+PS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDNPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKSCKRWRDTSGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+ V +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVSVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYQIGRG 290
>gi|124802670|ref|XP_001347556.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7]
gi|23495138|gb|AAN35469.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7]
Length = 386
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/305 (61%), Positives = 230/305 (75%), Gaps = 10/305 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKDD KP TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EA TIIE PM+VVG+VGY +TP+GLR L+TVWA H+S+E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KS+KKAFT K E K+ L++I+KY +V+R + HTQ K L+ KKAH
Sbjct: 121 NWYKSEKKAFT---KSLNVPEATKN--CLLKRIEKYCTVLRAICHTQPSKTP-LRMKKAH 174
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+Q+NGG++ EK+++ EK +PV VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG----KGGQESH 316
LPRKTHRGLRKVACIGAWHPARV F + R GQ GY HRTE NKK+Y++G K +
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYRIGLKTDKNSASTD 294
Query: 317 TGITE 321
ITE
Sbjct: 295 ADITE 299
>gi|76496472|ref|NP_001029025.1| 60S ribosomal protein L3 isoform b [Homo sapiens]
gi|397502003|ref|XP_003821662.1| PREDICTED: 60S ribosomal protein L3 isoform 2 [Pan paniscus]
gi|426394516|ref|XP_004063541.1| PREDICTED: 60S ribosomal protein L3 isoform 2 [Gorilla gorilla
gorilla]
Length = 354
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/291 (63%), Positives = 220/291 (75%), Gaps = 50/291 (17%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKA H
Sbjct: 121 NWHKSKKKA--------------------------------------------------H 130
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 131 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 190
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 191 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 241
>gi|296236923|ref|XP_002763539.1| PREDICTED: 60S ribosomal protein L3 isoform 2 [Callithrix jacchus]
Length = 354
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/291 (63%), Positives = 220/291 (75%), Gaps = 50/291 (17%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKA H
Sbjct: 121 NWHKSKKKA--------------------------------------------------H 130
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT++EK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 131 LMEIQVNGGTVSEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 190
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 191 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 241
>gi|407850972|gb|EKG05117.1| ribosomal protein L13, putative [Trypanosoma cruzi]
Length = 462
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/307 (58%), Positives = 235/307 (76%), Gaps = 3/307 (0%)
Query: 20 RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD 79
+MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+ LT+F+ +KAGMTHIVRD
Sbjct: 34 QMSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRD 93
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
V++PGSK++KKE E VTI+E PPM+VVG+VGY +TP G +++ TVWA H S E RRRFY
Sbjct: 94 VDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFY 153
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQK 197
KNW +S + AFTK + T EG+ + L+ K A ++RV+AHTQ+RK++ + K
Sbjct: 154 KNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVK 213
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
KAH+ EIQ+NGGTIAEK++ A EK++ +D++FQ+ E D+ VTKG G+ GVV RWG
Sbjct: 214 KAHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAVTKGHGFTGVVKRWG 273
Query: 258 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESH 316
V LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKK+Y+LG+ E +
Sbjct: 274 VACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPN 333
Query: 317 TGITEFD 323
T +D
Sbjct: 334 QATTTYD 340
>gi|71652016|ref|XP_814673.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener]
gi|71652018|ref|XP_814674.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener]
gi|70879667|gb|EAN92822.1| ribosomal protein L3, putative [Trypanosoma cruzi]
gi|70879668|gb|EAN92823.1| ribosomal protein L3, putative [Trypanosoma cruzi]
Length = 428
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/306 (59%), Positives = 234/306 (76%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM+VVG+VGY +TP G +++ TVWA H S E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AFTK + T EG+ + L+ K A ++RV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQ+NGGTIAEK++ A EK++ +D++FQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAVTKGHGFTGVVKRWGV 240
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHT 317
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKK+Y+LG+ E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300
Query: 318 GITEFD 323
T +D
Sbjct: 301 ATTTYD 306
>gi|332825391|ref|XP_001143080.2| PREDICTED: 60S ribosomal protein L3-like [Pan troglodytes]
Length = 718
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/265 (67%), Positives = 223/265 (84%), Gaps = 1/265 (0%)
Query: 47 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMV 106
GK A SKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ETPPM+V
Sbjct: 342 GKCLALRDGVSSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVV 401
Query: 107 VGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSI 166
VG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYKNW KSKKKAFTKY K+++ ++ KK +
Sbjct: 402 VGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDDKKQL 461
Query: 167 QAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQI 226
+ +KKY V+RV+AHTQ+R + L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+
Sbjct: 462 EKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQV 520
Query: 227 PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFT 286
PV+ VF +DEMID+IGVTKGKGY+GV +RW LPRKTH+GLRKVACIGAWHPARV+F+
Sbjct: 521 PVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKNLPRKTHQGLRKVACIGAWHPARVAFS 580
Query: 287 VARAGQNGYHHRTEMNKKVYKLGKG 311
VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 581 VARAGQKGYHHRTEINKKIYKIGQG 605
>gi|261195566|ref|XP_002624187.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
gi|239588059|gb|EEQ70702.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
gi|239610450|gb|EEQ87437.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis ER-3]
Length = 346
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/257 (69%), Positives = 218/257 (84%), Gaps = 3/257 (1%)
Query: 67 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVW 126
+GYKAGMT VRD+++PG+K+HKKE EAVTI+ETPPM+ VGVVGY++TPRGLRSL TVW
Sbjct: 1 MGYKAGMTTTVRDLDRPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVW 60
Query: 127 AQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHT 186
A+HLS+EV+RRFYKNW KSKKKAFTKY+K + + G SI +LE+IKKY +VVRVLAHT
Sbjct: 61 AEHLSDEVKRRFYKNWYKSKKKAFTKYAKNHSENSGA-SISRELERIKKYCTVVRVLAHT 119
Query: 187 QIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKG 246
QIRK LKQKKAHLME+QVNGG++A+KVD+A+G FEK I +D+VF+KDEMID+I VTKG
Sbjct: 120 QIRKTP-LKQKKAHLMEVQVNGGSVADKVDFAHGLFEKPIEIDSVFEKDEMIDVIAVTKG 178
Query: 247 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVY 306
G+ GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y
Sbjct: 179 HGFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIY 238
Query: 307 KLGKGGQESHTGITEFD 323
++GKG E + TEFD
Sbjct: 239 RIGKGSDEGNAS-TEFD 254
>gi|72387810|ref|XP_844329.1| ribosomal protein L3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359480|gb|AAX79917.1| ribosomal protein L3, putative [Trypanosoma brucei]
gi|70800862|gb|AAZ10770.1| ribosomal protein L3, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 480
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 234/306 (76%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKAGMTHIVRDV
Sbjct: 52 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 111
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM+VVG+VGY +TP G +++ TVWA H S E RRRFYK
Sbjct: 112 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 171
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AFTK + T EG+ + L+ +K A ++RV+AHTQ+RK++ + KK
Sbjct: 172 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKK 231
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQ+NGGTIA+K++ A EK++ +D+VFQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 232 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 291
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHT 317
LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKK+Y+LG+ E +
Sbjct: 292 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 351
Query: 318 GITEFD 323
T +D
Sbjct: 352 ATTAYD 357
>gi|261327490|emb|CBH10465.1| ribosomal protein L3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 480
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 234/306 (76%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKAGMTHIVRDV
Sbjct: 52 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 111
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM+VVG+VGY +TP G +++ TVWA H S E RRRFYK
Sbjct: 112 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 171
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AFTK + T EG+ + L+ +K A ++RV+AHTQ+RK++ + KK
Sbjct: 172 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKK 231
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQ+NGGTIA+K++ A EK++ +D+VFQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 232 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 291
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHT 317
LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKK+Y+LG+ E +
Sbjct: 292 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 351
Query: 318 GITEFD 323
T +D
Sbjct: 352 ATTAYD 357
>gi|407411575|gb|EKF33582.1| ribosomal protein L13, putative [Trypanosoma cruzi marinkellei]
Length = 428
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 234/306 (76%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM+VVG+VGY +TP G +++ TVWA H S E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AFTK + T EG+ + L+ K A ++RV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTAEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQ+NGGTIAEK++ A EK++ +D++FQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAVTKGHGFTGVVKRWGV 240
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHT 317
LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKK+Y+LG+ E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300
Query: 318 GITEFD 323
T +D
Sbjct: 301 ATTTYD 306
>gi|389582750|dbj|GAB65487.1| ribosomal protein L3 [Plasmodium cynomolgi strain B]
Length = 386
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/305 (61%), Positives = 226/305 (74%), Gaps = 10/305 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKDD KP TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EA TIIE PM+VVG+VGY +TP+GLR L TVWA H+S+E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIIECAPMVVVGMVGYRETPKGLRVLTTVWANHVSDEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KS KKAFTK K + ++ ++I+KY +V+R + HTQ K L KKAH
Sbjct: 121 NWYKSDKKAFTK-----ALMVPKLTKESLYKRIEKYCTVLRAVCHTQPSKTP-LTMKKAH 174
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG + EK+D+ EK +PV VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEIQINGGGMKEKIDFLKELLEKNLPVSNVFNTNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG----KGGQESH 316
LPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKK+Y++G K +
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIGLKKDKNNASTD 294
Query: 317 TGITE 321
ITE
Sbjct: 295 ADITE 299
>gi|348537834|ref|XP_003456398.1| PREDICTED: 60S ribosomal protein L3-like [Oreochromis niloticus]
Length = 422
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/290 (64%), Positives = 241/290 (83%), Gaps = 1/290 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHG +GFLP KR+ +HRG+V+++PKD+PS P LTAFLGYKAGMTH +R+V
Sbjct: 16 SHRKFHAPRHGHMGFLPCKRSKKHRGRVRSWPKDNPSHPVHLTAFLGYKAGMTHTLREVH 75
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+ G K K+E EAVTIIETPP++VVGVVGY+KT RGLR+L T++A+HLS+E +RRFYKN
Sbjct: 76 RTGLKQSKREEVEAVTIIETPPVIVVGVVGYIKTIRGLRALKTIFAEHLSDECKRRFYKN 135
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W KSKKKAFTKY+K+++ + GKK + +KKY SV+RV+ H+Q+R + L+QKKAH+
Sbjct: 136 WYKSKKKAFTKYAKKWQDETGKKQLDKDFNAMKKYCSVIRVIVHSQMRLLP-LRQKKAHV 194
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
ME+Q+NGGTI++KVD+A E+ +PV AVF +DEMID+IGVTKG G++GV +RW +L
Sbjct: 195 MEVQLNGGTISDKVDWAKEHLEQAVPVSAVFYQDEMIDVIGVTKGHGFKGVTSRWHTKKL 254
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTH+GLRKVACIGAWHPARV FT ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 255 PRKTHKGLRKVACIGAWHPARVGFTEARAGQKGYHHRTEINKKIYRIGRG 304
>gi|72387812|ref|XP_844330.1| ribosomal protein L3, mitochondrial [Trypanosoma brucei TREU927]
gi|449802250|pdb|3ZF7|FF Chain f, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|62359481|gb|AAX79918.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei]
gi|70800863|gb|AAZ10771.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261327491|emb|CBH10466.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei
gambiense DAL972]
Length = 429
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 234/306 (76%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM+VVG+VGY +TP G +++ TVWA H S E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AFTK + T EG+ + L+ +K A ++RV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQ+NGGTIA+K++ A EK++ +D+VFQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 240
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHT 317
LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKK+Y+LG+ E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300
Query: 318 GITEFD 323
T +D
Sbjct: 301 ATTAYD 306
>gi|154282025|ref|XP_001541825.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1]
gi|150412004|gb|EDN07392.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1]
Length = 346
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/257 (68%), Positives = 218/257 (84%), Gaps = 3/257 (1%)
Query: 67 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVW 126
+GYKAGMT VRD+E+PG+K+HKKE EAVTI+ETPPM+ VGVVGY++TPRGLRSL TVW
Sbjct: 1 MGYKAGMTTTVRDLERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVW 60
Query: 127 AQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHT 186
A+HLS+EV+RRFYKNW KSKKKAFTKY+K + ++G S+ +LE+IKKY +VVR+LAHT
Sbjct: 61 AEHLSDEVKRRFYKNWYKSKKKAFTKYAKNHSENKGA-SVARELERIKKYCTVVRLLAHT 119
Query: 187 QIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKG 246
QIRK LKQKKAHLME+QVNGG++A+KVD+A+G FEK I +D +F+KDEMID+I VTKG
Sbjct: 120 QIRKTP-LKQKKAHLMEVQVNGGSVADKVDFAHGLFEKPIEIDTIFEKDEMIDVIAVTKG 178
Query: 247 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVY 306
G+ GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y
Sbjct: 179 HGFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIY 238
Query: 307 KLGKGGQESHTGITEFD 323
++GKG E + TEFD
Sbjct: 239 RIGKGSDEGNAS-TEFD 254
>gi|156081997|ref|XP_001608491.1| ribosomal protein L3 [Plasmodium vivax Sal-1]
gi|148801062|gb|EDL42467.1| ribosomal protein L3, putative [Plasmodium vivax]
Length = 386
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/305 (61%), Positives = 226/305 (74%), Gaps = 10/305 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKDD KP TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EA TIIE PM+VVG+VGY +TP+GLR L TVWA H+S+E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIIECAPMVVVGMVGYRETPKGLRILTTVWANHVSDEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KS KKAFTK K + ++ ++I+KY +V+R + HTQ K L KKAH
Sbjct: 121 NWYKSDKKAFTK-----ALMVPKLTKESLYKRIEKYCTVLRAVCHTQPSKTP-LSMKKAH 174
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG + +K+D+ EK +PV VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEIQINGGGMKDKIDFLKELLEKNLPVSNVFNTNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG----KGGQESH 316
LPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKK+Y++G K +
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIGLKKDKNNASTD 294
Query: 317 TGITE 321
ITE
Sbjct: 295 ADITE 299
>gi|221054097|ref|XP_002261796.1| ribosomal protein L3 [Plasmodium knowlesi strain H]
gi|193808256|emb|CAQ38959.1| ribosomal protein L3, putative [Plasmodium knowlesi strain H]
Length = 386
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/305 (61%), Positives = 226/305 (74%), Gaps = 10/305 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKDD KP TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EA TI+E PM+VVG+VGY +TP+GLR L TVWA H+S+E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLRILTTVWANHVSDEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KS KKAFTK K + ++ ++I+KY +V+R + HTQ K L KKAH
Sbjct: 121 NWYKSDKKAFTK-----ALMVPKLTKESLYKRIEKYCTVLRAVCHTQPSKTP-LSMKKAH 174
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG + +K+D+ EK +PV VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEIQINGGGMKDKIDFLKELMEKNLPVSNVFNTNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG----KGGQESH 316
LPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKK+Y++G K +
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIGLKKDKNNASTD 294
Query: 317 TGITE 321
ITE
Sbjct: 295 ADITE 299
>gi|342180584|emb|CCC90060.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 429
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/306 (58%), Positives = 232/306 (75%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM+VVG VGY +TP G +++ TVWA H S E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGFVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AFTK + T EG+ + L+ K A ++RV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQ+NGGTIA+K++ A EK++ +D+VFQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 240
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHT 317
LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKK+Y+LG+ E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300
Query: 318 GITEFD 323
T +D
Sbjct: 301 ATTSYD 306
>gi|145527660|ref|XP_001449630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417218|emb|CAK82233.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/303 (58%), Positives = 230/303 (75%), Gaps = 5/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHG+LGF PRKR HRG+++AFPKD+ LTAF G+KAGMTHI+R V
Sbjct: 1 MSHRKFEAPRHGNLGFTPRKRTKHHRGRIRAFPKDNTKAQPHLTAFAGFKAGMTHILRTV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+PGSKL+ EAVTI+ETPP++VVG+VGY++TPRGLR+L TVW+ ++++ RRFYK
Sbjct: 61 ERPGSKLNGNVVVEAVTIVETPPLVVVGIVGYIETPRGLRALTTVWSTKIAKDTLRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKKAFT Y+K + K+++ QL++I KY VVRV+ HTQ+ K+ L+QKK H
Sbjct: 121 NWINSKKKAFTNYNK---ANAEPKNLETQLKRIVKYCQVVRVIVHTQMSKL-NLRQKKNH 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ E+QVNGG +KV++A G EK++ VD VF ++E ID++GVTKGKG GV+ R+GV
Sbjct: 177 VFEVQVNGGNTEQKVNFAKGLLEKEVKVDQVFNQNEQIDVLGVTKGKGVAGVIKRFGVKH 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
L +KTHRG R+V CIG WHPA V ++VAR GQ GYHHRTEMNKK+Y++G G + +T T
Sbjct: 237 LQKKTHRGWRRVGCIGGWHPANVRYSVARTGQLGYHHRTEMNKKIYRIGAAG-DKNTAST 295
Query: 321 EFD 323
E D
Sbjct: 296 EAD 298
>gi|291402716|ref|XP_002717715.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 428
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/260 (68%), Positives = 218/260 (83%), Gaps = 1/260 (0%)
Query: 52 FPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVG 111
F DPSKP LTAFLGYKAGMTHIVR+V+ PGSK++KKE EAVTI+ETPPM+VVG+VG
Sbjct: 58 FISLDPSKPVHLTAFLGYKAGMTHIVREVDWPGSKVNKKEVVEAVTIVETPPMVVVGIVG 117
Query: 112 YVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLE 171
YV+TPRGLR+ TV+A+H+S+E +RRFYKNW KSKKKAFTKY K+++ D GK+ +
Sbjct: 118 YVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDAGKRQLDKDFS 177
Query: 172 KIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAV 231
+KKY V+ VLAHTQ+R + L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV V
Sbjct: 178 SMKKYCLVISVLAHTQMRLLP-LQQKKAHLMEIQVNGGTVAEKLDWAQERLEQQVPVSQV 236
Query: 232 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAG 291
F +D+MID+IGVTKGKGY+GV +RW +L RKTHRGLRKVACIGAWHPA V+F+VARAG
Sbjct: 237 FGQDKMIDVIGVTKGKGYKGVTSRWHTKKLLRKTHRGLRKVACIGAWHPAHVAFSVARAG 296
Query: 292 QNGYHHRTEMNKKVYKLGKG 311
Q GYHHRTE+NKK+YK+G+G
Sbjct: 297 QKGYHHRTEINKKIYKIGQG 316
>gi|193787392|dbj|BAG52598.1| unnamed protein product [Homo sapiens]
Length = 354
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/291 (62%), Positives = 218/291 (74%), Gaps = 50/291 (17%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKSSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKA H
Sbjct: 121 NWHKSKKKA--------------------------------------------------H 130
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 131 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 190
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVA IGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 191 LPRKTHRGLRKVARIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 241
>gi|403335216|gb|EJY66782.1| 60S ribosomal protein L3 [Oxytricha trifallax]
Length = 397
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/294 (62%), Positives = 236/294 (80%), Gaps = 3/294 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PR GSL +LPR+R HRG++++FP+DD P LTAF+GYKAGMTH+ R
Sbjct: 1 MSHRKYECPRSGSLAYLPRRRTRHHRGRIRSFPRDDVKAPIHLTAFVGYKAGMTHVARHH 60
Query: 81 EK-PGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
EK G K+ K++ E VT+IETPPM +VG+VGY++TPRGLR+L TVWAQH+ ++V+RRFY
Sbjct: 61 EKREGKKVIKRDIVEPVTVIETPPMKIVGLVGYIETPRGLRALATVWAQHIPDQVKRRFY 120
Query: 140 KNWCKSKKKAFTKYSKQY-ETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
KNWC+SKKKAFTKY++++ E D+ KKSI+ LE+IKKY VVRVL TQ+ K+ +Q+K
Sbjct: 121 KNWCQSKKKAFTKYAQRWQEDDKSKKSIKRDLERIKKYCQVVRVLTSTQLDKL-NFRQRK 179
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AHL+EIQVNGGT+A+KVD+++ FE ++ V +F +EMID IGVTKG G EGV+ R+GV
Sbjct: 180 AHLIEIQVNGGTVAQKVDWSFAKFESEVSVAEIFNDNEMIDTIGVTKGYGTEGVIKRFGV 239
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG 312
TR+PRKTHRGLRKV CIGAWHPA V +TVAR GQ GYH RTE NKK+Y++G G
Sbjct: 240 TRMPRKTHRGLRKVGCIGAWHPAAVKWTVARRGQLGYHSRTEQNKKIYRVGAGA 293
>gi|157874311|ref|XP_001685639.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|157876054|ref|XP_001686391.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|157876056|ref|XP_001686392.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|157876058|ref|XP_001686393.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|157876060|ref|XP_001686394.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|66476128|gb|AAY51372.1| ribosomal protein L3 [Leishmania major]
gi|68128711|emb|CAJ08844.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129465|emb|CAJ08008.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129466|emb|CAJ08009.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129467|emb|CAJ08010.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129468|emb|CAJ08011.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
Length = 419
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/306 (58%), Positives = 232/306 (75%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM++VG+VGY +TP GL+++ TVWA H S E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AF++ + T EGK + L K ASV+RV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQVNGG++A K+ A EK++ VD+VFQ+ E D+ VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHT 317
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKK+Y++G+ E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300
Query: 318 GITEFD 323
T +D
Sbjct: 301 ATTTYD 306
>gi|146097010|ref|XP_001468006.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
gi|134072372|emb|CAM71080.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
Length = 419
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/306 (58%), Positives = 232/306 (75%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM++VG+VGY +TP GL+++ TVWA H S E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AF++ + T EGK + L K ASV+RV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQVNGG++A K+ A EK++ VD+VFQ+ E D+ VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHT 317
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKK+Y++G+ E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300
Query: 318 GITEFD 323
T +D
Sbjct: 301 ATTTYD 306
>gi|146097013|ref|XP_001468007.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
gi|146099403|ref|XP_001468635.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
gi|134072373|emb|CAM71081.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
gi|134073003|emb|CAM71722.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
Length = 419
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/306 (58%), Positives = 231/306 (75%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM++VG+VGY +TP GL+++ TVWA H S E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AF++ + T EGK + L K ASV+RV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQ+NGG +A K+ A EK++ VD+VFQ+ E D+ VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHT 317
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKK+Y++G+ E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300
Query: 318 GITEFD 323
T +D
Sbjct: 301 ATTTYD 306
>gi|410902231|ref|XP_003964598.1| PREDICTED: 60S ribosomal protein L3-like [Takifugu rubripes]
Length = 408
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/291 (62%), Positives = 245/291 (84%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG GFLP KR+ +HRG+V+++PKDD +P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFHAPRHGHTGFLPHKRSKKHRGRVRSWPKDDARRPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ G K K+E EAVTIIETPP++VVGVVGY++T GLRS +V+A+HLS+E +RRFY+
Sbjct: 61 QRVGLKQAKREEVEAVTIIETPPVIVVGVVGYIQTVHGLRSFKSVFAEHLSDECKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKYSK+++ ++GKK ++ + E++KKY SV+RV+ HTQ+R + + QKKAH
Sbjct: 121 NWYKSKKKAFTKYSKKWQDEKGKKQLEKEFEQMKKYCSVIRVIIHTQMRLLP-IGQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+Q+NGG+I++KVD+A E+ +PV +VF +DE IDIIGVTKG+G++GV++RW +
Sbjct: 180 IMEVQLNGGSISDKVDWAKEHLEQAVPVSSVFYQDETIDIIGVTKGRGFKGVMSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV +T+ARAGQ GY+HRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYTIARAGQKGYYHRTEINKKIYRIGRG 290
>gi|401428725|ref|XP_003878845.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401428727|ref|XP_003878846.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495094|emb|CBZ30398.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495095|emb|CBZ30399.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 419
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/306 (57%), Positives = 231/306 (75%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM++VG+VGY +TP GL+++ TVWA H S E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AF++ + T EG+ + L K ASV+RV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGRIAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQ+NGG +A K+ A EK++ VD+VFQ+ E D+ VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHT 317
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKK+Y++G+ E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300
Query: 318 GITEFD 323
T +D
Sbjct: 301 ATTTYD 306
>gi|401427361|ref|XP_003878164.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494411|emb|CBZ29713.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 419
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/306 (57%), Positives = 230/306 (75%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRTRAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM++VG+VGY +TP GL+++ TVWA H S E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AF++ + T EG+ L K ASV+RV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGRVVEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQ+NGG +A K+ A EK++ VD+VFQ+ E D+ VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHT 317
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKK+Y++G+ E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300
Query: 318 GITEFD 323
T +D
Sbjct: 301 ATTTYD 306
>gi|7417236|gb|AAF62506.1| ribosomal protein L3 [Trypanoplasma borreli]
Length = 416
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/306 (57%), Positives = 229/306 (74%), Gaps = 3/306 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ +KAGMTHIVRD+
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRCRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM +VGV GY +T G + + TVWA H+S+E RRR+YK
Sbjct: 61 DRPGSKMNKKEVVEPVTILEAPPMAIVGVTGYRETAVGYKCIGTVWAHHVSQEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AFTK + GK + Q L+ +K A+V+RV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKSFIRSKNGKVAEQRVLKALKDKATVIRVIAHTQLRKLRNHRVGNKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQVNGGTI K+ A EK++ +D++FQ+ E D+ VTKG G+EGVV RWGV
Sbjct: 181 AHIQEIQVNGGTIEAKLKMAKDLLEKEVRIDSIFQQSETCDVCAVTKGHGFEGVVHRWGV 240
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ-ESHT 317
LPRK+HRGLRKVACIGAWHPARV +TVARAGQNGYHHRT +NKK+Y++G+ +
Sbjct: 241 ACLPRKSHRGLRKVACIGAWHPARVMYTVARAGQNGYHHRTHLNKKIYRIGRSSSVDPKQ 300
Query: 318 GITEFD 323
T +D
Sbjct: 301 ATTTYD 306
>gi|378726960|gb|EHY53419.1| 60S ribosomal protein L3 [Exophiala dermatitidis NIH/UT8656]
Length = 346
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/257 (66%), Positives = 219/257 (85%), Gaps = 3/257 (1%)
Query: 67 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVW 126
+GYKAGMT IVRD+++PG+K+HKKE EAVT+IETPPM+VVG+VGY++TPRGLRSL TVW
Sbjct: 1 MGYKAGMTTIVRDLDRPGAKMHKKEIVEAVTVIETPPMIVVGLVGYIETPRGLRSLTTVW 60
Query: 127 AQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHT 186
A+HL +E++RRFYKNW +SKKKAFTKY+K+Y ++ S+ +LE+IKKY +VVRVLAHT
Sbjct: 61 AEHLGDELKRRFYKNWYRSKKKAFTKYAKKYSENKST-SVTRELERIKKYCTVVRVLAHT 119
Query: 187 QIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKG 246
QIR+ LKQKKAHLMEIQ+NGG+IA+KV++ +G FEK + +D +F++DEMID I VTKG
Sbjct: 120 QIRQTP-LKQKKAHLMEIQINGGSIADKVEFGHGLFEKPVEIDTIFEQDEMIDCIAVTKG 178
Query: 247 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVY 306
G++GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N KVY
Sbjct: 179 HGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKVY 238
Query: 307 KLGKGGQESHTGITEFD 323
++GKG E + T+FD
Sbjct: 239 RIGKGNDEKNAA-TDFD 254
>gi|429862403|gb|ELA37055.1| 60s ribosomal protein l3 [Colletotrichum gloeosporioides Nara gc5]
Length = 345
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/257 (67%), Positives = 217/257 (84%), Gaps = 3/257 (1%)
Query: 67 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVW 126
+GYKAGMT IVRD+++PG+K +KKE EAV+II+TPP++VVG+VGY++TPRGLRSL TVW
Sbjct: 1 MGYKAGMTTIVRDLDRPGAKANKKEVVEAVSIIDTPPVIVVGIVGYIETPRGLRSLTTVW 60
Query: 127 AQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHT 186
A+HLS+E+RRRFYKNW KSKKKAFTKY+KQ+ G +I ++E+IKKY +VVRVLAHT
Sbjct: 61 AEHLSDELRRRFYKNWYKSKKKAFTKYAKQHAESSGA-NITREIERIKKYCTVVRVLAHT 119
Query: 187 QIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKG 246
QIRK LKQKKAHLMEIQ+NGG++ EKVD+ YG FEK + V +VF+KDE+ID+I VTKG
Sbjct: 120 QIRKTP-LKQKKAHLMEIQINGGSVPEKVDFGYGLFEKPVEVSSVFEKDEVIDVIAVTKG 178
Query: 247 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVY 306
KG+ GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N KVY
Sbjct: 179 KGFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKVY 238
Query: 307 KLGKGGQESHTGITEFD 323
++GKG + + TE D
Sbjct: 239 RIGKGDADDNAA-TELD 254
>gi|395747312|ref|XP_003778589.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
[Pongo abelii]
Length = 402
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 237/291 (81%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAF+K K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFSKACKRWRDPDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>gi|164659874|ref|XP_001731061.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966]
gi|159104959|gb|EDP43847.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966]
Length = 345
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 179/257 (69%), Positives = 225/257 (87%), Gaps = 3/257 (1%)
Query: 67 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVW 126
+GYKAGMTHIVRD+++PGSK HK+E EA T+IETPPM+VVG+VGYV+TPRGLRSL TVW
Sbjct: 1 MGYKAGMTHIVRDLDRPGSKYHKREIVEATTVIETPPMVVVGMVGYVETPRGLRSLTTVW 60
Query: 127 AQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHT 186
A+HLS+EV+RRFYKNW +SKKKAFTKY+K++ + G+ SI +LE+I+KY SVVRVLAHT
Sbjct: 61 AEHLSDEVKRRFYKNWYRSKKKAFTKYAKKHSENNGQ-SIARELERIRKYCSVVRVLAHT 119
Query: 187 QIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKG 246
Q+R LKQKKAHLMEIQVNGG+++EKVD+A FEK + V+++F +DE++D+IGVTKG
Sbjct: 120 QLRNT-SLKQKKAHLMEIQVNGGSVSEKVDFANNLFEKTVDVNSLFTQDELVDVIGVTKG 178
Query: 247 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVY 306
KGYEGV RWG+T+LPRKTH+GLRKVACIGAWHPA V FTVAR+GQ+GYHHRTE+NKK+Y
Sbjct: 179 KGYEGVTARWGITKLPRKTHKGLRKVACIGAWHPANVMFTVARSGQDGYHHRTELNKKIY 238
Query: 307 KLGKGGQESHTGITEFD 323
++G G ++ +G TEFD
Sbjct: 239 RIGNGADKA-SGATEFD 254
>gi|82596814|ref|XP_726417.1| ribosomal protein L3 [Plasmodium yoelii yoelii 17XNL]
gi|23481819|gb|EAA17982.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii]
Length = 386
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 181/305 (59%), Positives = 224/305 (73%), Gaps = 10/305 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKD+ P TAF+GYK+GM+HIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDNKELPPHFTAFMGYKSGMSHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EA TI+E PM+VVG+VGY +TP+GL+ L VWA H+S+E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLKVLTAVWANHVSDEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KS KKAFTK +T + K +I+KY +++R + HTQ K L+ KKAH
Sbjct: 121 NWYKSDKKAFTKCLNIPDTTKEK-----LYNRIEKYCTILRAVCHTQPSKTP-LRLKKAH 174
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG + +K+++ EK IPV VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEIQINGGHMKDKINFVKELLEKNIPVTNVFNTNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG----KGGQESH 316
LPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKK+Y++G K +
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIGLKKDKNNASTD 294
Query: 317 TGITE 321
ITE
Sbjct: 295 ADITE 299
>gi|444727301|gb|ELW67802.1| 60S ribosomal protein L3-like protein [Tupaia chinensis]
Length = 927
Score = 367 bits (941), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 236/326 (72%), Gaps = 35/326 (10%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHALREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E +AVTI+ETPP++VVGVVGYV TPRGLRS TV+A+H+S+E RRRFYK
Sbjct: 61 HRPGLKISKREEVDAVTIVETPPLVVVGVVGYVATPRGLRSFKTVFAEHISDECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQI------------ 188
+W +SKKKAFTK +++ +G+K +Q ++KY V+RV+ HTQ
Sbjct: 121 DWHRSKKKAFTKACRRWRDCDGRKQLQKDFAAMRKYCRVIRVIVHTQAPACGHVEGDREG 180
Query: 189 -----------------------RKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQ 225
K+ +QKKAH+MEIQ+NGGT+AEKV +A EKQ
Sbjct: 181 PGALAGHVAPQVVVLGLTVLCPQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQ 240
Query: 226 IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSF 285
+PV +VF + E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV
Sbjct: 241 VPVHSVFSQSEVIDVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGC 300
Query: 286 TVARAGQNGYHHRTEMNKKVYKLGKG 311
++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 301 SIARAGQKGYHHRTELNKKIYRIGRG 326
>gi|340053197|emb|CCC47485.1| putative ribosomal protein L3, fragment [Trypanosoma vivax Y486]
Length = 646
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 173/289 (59%), Positives = 222/289 (76%), Gaps = 2/289 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM+VVG+VGY +TP G +++ TVWA H S E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKAIGTVWAHHTSVEFRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AFTK + T EG+ + K A ++RV+AHTQ+RK++ + K+
Sbjct: 121 NWKQSAQLAFTKRKQFARTKEGRLAEGRMFRAFAKKADIIRVVAHTQLRKLRNNRVGVKR 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQ+NGGT+ +K++ A EK+I +D+VFQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTVQQKIELAKSLLEKEIRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 240
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK 307
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKK+Y+
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQ 289
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/241 (53%), Positives = 174/241 (72%), Gaps = 3/241 (1%)
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKS 145
K+++KE E VTI+E PPM+VVG+VGY +TP G +++ TVWA H S E RRRFYKNW +S
Sbjct: 286 KIYQKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKAIGTVWAHHTSVEFRRRFYKNWKQS 345
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKKAHLME 203
+ AFTK + T EG+ + K A ++RV+AHTQ+RK++ + K+AH+ E
Sbjct: 346 AQLAFTKRKQFARTKEGRLAEGRMFRAFAKKADIIRVVAHTQLRKLRNNRVGVKRAHVSE 405
Query: 204 IQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
IQ+NGGT+ +K++ A EK+I +D+VFQ+ E D+ VTKG G+ GVV RWGV LPR
Sbjct: 406 IQINGGTVQQKIELAKSLLEKEIRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGVACLPR 465
Query: 264 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHTGITEF 322
KTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKK+Y++G+ E + T +
Sbjct: 466 KTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQIGRAVSMEPNQATTAY 525
Query: 323 D 323
D
Sbjct: 526 D 526
>gi|118389862|ref|XP_001027976.1| ribosomal protein L3 containing protein [Tetrahymena thermophila]
gi|74894030|sp|O96774.1|RL3_TETTH RecName: Full=Ribosomal protein L3
gi|358440087|pdb|4A17|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 2.
gi|358440133|pdb|4A1A|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 3.
gi|358440179|pdb|4A1C|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 4.
gi|358440225|pdb|4A1E|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 1
gi|3861468|emb|CAA10068.1| ribosomal protein L3 [Tetrahymena thermophila]
gi|89309746|gb|EAS07734.1| ribosomal protein L3 containing protein [Tetrahymena thermophila
SB210]
Length = 391
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/296 (60%), Positives = 231/296 (78%), Gaps = 5/296 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGF PR+R HRG+ ++FPKDDPSK LTAF G+KAGMTHI+R+V
Sbjct: 1 MSHRKFEAPRHGSLGFRPRRRTRHHRGRCRSFPKDDPSKKPHLTAFTGFKAGMTHILREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ GS+ +KKE EAVT+IE PPM +VGVVGY+ TPRGLR+L TVWA+ + ++RFYK
Sbjct: 61 DRSGSRHNKKEVVEAVTVIECPPMTIVGVVGYIDTPRGLRALTTVWAKTIDNNTKKRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW S KKAFT + K ++ +K+ L++I+KY SVVRV+AHT + K+ L+QKK H
Sbjct: 121 NWANSNKKAFTHHEKNFD----QKAQDLLLKRIEKYCSVVRVIAHTNMSKL-NLRQKKNH 175
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
++EIQVNGG +AEKV +A EK++ VD++F ++EM+D++GVTKGKG+ GV+ R+GV
Sbjct: 176 ILEIQVNGGKVAEKVAFAKSLLEKEVKVDSIFAENEMLDVLGVTKGKGFAGVIKRFGVKH 235
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
L +KTHRG RKV CIGAWHP+R+ FTV RAGQ GYHHRTE NKKVY++GKG S+
Sbjct: 236 LQKKTHRGYRKVGCIGAWHPSRIRFTVPRAGQLGYHHRTETNKKVYRVGKGDDASN 291
>gi|109100342|ref|XP_001106678.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta]
Length = 354
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 178/291 (61%), Positives = 212/291 (72%), Gaps = 50/291 (17%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR +RH GKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRRSRHHGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+E PPM+VVG+ GYV+TPRGLR+ TV+A+H+ +E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVEMPPMVVVGIAGYVETPRGLRTFKTVFAEHMGDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKA H
Sbjct: 121 NWHKSKKKA--------------------------------------------------H 130
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV + W +
Sbjct: 131 LTEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSHWHTKK 190
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 191 LPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 241
>gi|213515418|ref|NP_001133147.1| ribosomal protein L3-like [Salmo salar]
gi|197632147|gb|ACH70797.1| ribosomal protein L3-like [Salmo salar]
Length = 409
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 188/291 (64%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG +GFLP KR+ +HRGK +++P+DDPS+P LTAF+GYKAGMTHI+R+V
Sbjct: 1 MSHRKFHAPRHGHMGFLPCKRSKKHRGKPRSWPQDDPSQPVHLTAFMGYKAGMTHILREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+ G K K+E+ EAVTIIETPP+MVVGVVGY+ T RGLRS T++A+HLS+E +RRFYK
Sbjct: 61 HRTGLKQAKRESVEAVTIIETPPVMVVGVVGYIDTVRGLRSFKTIFAEHLSDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTKY+K++ + GKK ++ +KKY + +RVL HTQIR + LK KKAH
Sbjct: 121 SWYKSKKKAFTKYAKKWTDESGKKQLEKDFNNMKKYCTSIRVLIHTQIRLLP-LKAKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+Q+NGGTI+EKVD+ E+ +PV +VF +DEMID+IGVTKG G +GV +RWGV +
Sbjct: 180 IMEVQLNGGTISEKVDWVKEKLEQPVPVSSVFYQDEMIDVIGVTKGHGMKGVTSRWGVKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RV +T+ARAGQ GYHHRTE+NKK+Y++GKG
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVGYTIARAGQKGYHHRTELNKKIYRIGKG 290
>gi|237862632|gb|ACR24941.1| ribosomal protein L3 [Lepidochitona cinerea]
Length = 351
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 181/268 (67%), Positives = 227/268 (84%), Gaps = 1/268 (0%)
Query: 44 RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPP 103
RHRG++KAFPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE E V+++E PP
Sbjct: 1 RHRGQLKAFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEGVSVLEVPP 60
Query: 104 MMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGK 163
++VVGVVGYV TP+GLR+ NT+WA+HL EE RRRFYKNW +SKKKAFTK SK+++ + GK
Sbjct: 61 LVVVGVVGYVATPKGLRTFNTIWAEHLGEECRRRFYKNWARSKKKAFTKASKKWQDETGK 120
Query: 164 KSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFE 223
K I+ L K+KKY +VVRVL HTQ + M +QKKAH++EIQ+NGG+I +K+D+A FE
Sbjct: 121 KEIEKDLSKMKKYCNVVRVLCHTQTKLM-NTRQKKAHIVEIQLNGGSIPDKIDWAKDHFE 179
Query: 224 KQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 283
K +PV VF +DE+IDIIGVTKGKG +GV +RW +LPRKTH+GLRKVACIGAWHP+RV
Sbjct: 180 KTVPVQEVFAQDELIDIIGVTKGKGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 239
Query: 284 SFTVARAGQNGYHHRTEMNKKVYKLGKG 311
++VARAGQ GYHHRTE+NKK+Y+LG G
Sbjct: 240 QYSVARAGQKGYHHRTEINKKIYRLGSG 267
>gi|148697895|gb|EDL29842.1| mCG129893 [Mus musculus]
Length = 358
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 168/246 (68%), Positives = 213/246 (86%), Gaps = 2/246 (0%)
Query: 67 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPP-MMVVGVVGYVKTPRGLRSLNTV 125
LGYKAGMTHIVR+V++PGSK++KKE EAVTI+ETPP M+VVG+VGYV+TP+GLR+ TV
Sbjct: 1 LGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPPMVVVGIVGYVETPQGLRTFKTV 60
Query: 126 WAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAH 185
+A+H+S+E +R FYKNW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AH
Sbjct: 61 FAEHISDECKRHFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAH 120
Query: 186 TQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTK 245
TQ+R + L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTK
Sbjct: 121 TQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTK 179
Query: 246 GKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKV 305
GKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+
Sbjct: 180 GKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKI 239
Query: 306 YKLGKG 311
YK+G+G
Sbjct: 240 YKIGQG 245
>gi|162605876|ref|XP_001713453.1| 60S ribosomal protein L3 [Guillardia theta]
gi|13794385|gb|AAK39762.1|AF083031_119 60S ribosomal protein L3 [Guillardia theta]
Length = 375
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 165/301 (54%), Positives = 228/301 (75%), Gaps = 8/301 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M+HRKFE PRHGSL FLP+KR R GK+K+FPKDD + C LT +GYK+GMTH+ R V
Sbjct: 1 MAHRKFEAPRHGSLQFLPKKRCRRTVGKIKSFPKDDICQSCHLTGSIGYKSGMTHVERLV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+ P SK++K+E +AVTI+ETPP+++VG VGY+KTP+G+RSLNTVW + E ++R +YK
Sbjct: 61 DLPNSKMNKREVIDAVTILETPPILIVGFVGYIKTPKGIRSLNTVWIDEVDESIKRNYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKK+FT Y+K + K E KY S++R + ++I+K+ G K++K+
Sbjct: 121 NWYKSKKKSFTHYNKIVNLKKFK-------ETYFKYCSILRCIISSEIKKI-GFKKRKSK 172
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
++EIQ+NGG K+DY K+I +D +F ++E++DIIG++KGKG++GVV+RWGVT+
Sbjct: 173 ILEIQLNGGKPEHKLDYIEKILGKKITIDQIFSENELVDIIGISKGKGFQGVVSRWGVTK 232
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRG RKVAC+G+WHP+RVSFTVARAGQ+GYHHRT +N K+Y +GK G S+ +T
Sbjct: 233 LPRKTHRGARKVACVGSWHPSRVSFTVARAGQSGYHHRTSLNIKIYAIGKDGFISNHILT 292
Query: 321 E 321
Sbjct: 293 N 293
>gi|119580718|gb|EAW60314.1| ribosomal protein L3, isoform CRA_e [Homo sapiens]
gi|119580723|gb|EAW60319.1| ribosomal protein L3, isoform CRA_e [Homo sapiens]
gi|355563684|gb|EHH20246.1| hypothetical protein EGK_03058 [Macaca mulatta]
gi|390407371|dbj|BAM21009.1| hypothetical protein, partial [Homo sapiens]
Length = 351
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 164/239 (68%), Positives = 209/239 (87%), Gaps = 1/239 (0%)
Query: 73 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSE 132
MTHIVR+V++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+
Sbjct: 1 MTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISD 60
Query: 133 EVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMK 192
E +RRFYKNW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R +
Sbjct: 61 ECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP 120
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV
Sbjct: 121 -LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGV 179
Query: 253 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 180 TSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 238
>gi|426255009|ref|XP_004021160.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like [Ovis
aries]
Length = 491
Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 172/291 (59%), Positives = 220/291 (75%), Gaps = 14/291 (4%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 98 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 157
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ETPP++VV + A HLS+E RRRFYK
Sbjct: 158 HRPGLKISKREEVEAVTIVETPPLVVV-------------GVVGYVAXHLSDECRRRFYK 204
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 205 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 263
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+Q+NGGT+AEKV + EKQ+PV +VF ++E+ID+I VTKG+G +GV +RW +
Sbjct: 264 IMEVQLNGGTVAEKVAWVQARLEKQVPVHSVFSQNEVIDVIAVTKGRGVKGVTSRWHTKK 323
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHH TE+NKK+Y++G+G
Sbjct: 324 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHLTELNKKIYRIGRG 374
>gi|148682756|gb|EDL14703.1| mCG1036344 [Mus musculus]
Length = 360
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/298 (59%), Positives = 229/298 (76%), Gaps = 12/298 (4%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KF P+HG LGFLP KR++ H KVK+FPKDD SKP LT FLGYKAGMTHIV++V
Sbjct: 1 MSHSKFSAPKHGFLGFLPHKRSSWHHRKVKSFPKDDASKPVYLTTFLGYKAGMTHIVQEV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVG-------YVKTPRGLRSLNTVWAQHLSEE 133
++PGSK++KKE EAVTI++ P+ YV++PRGLR+ NTV+A+H+S+E
Sbjct: 61 DRPGSKVNKKEVVEAVTIVD--PLTPPPPPVVVVGVVGYVESPRGLRTFNTVFAEHISDE 118
Query: 134 VRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG 193
+ RFYKNW KSKKKAFTKY K+++ GKK ++ +KKY V+ ++AHTQ+R +
Sbjct: 119 CKWRFYKNWHKSKKKAFTKYYKKWQDGTGKKQLEKDSSSMKKYCQVICIIAHTQMRLLP- 177
Query: 194 LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVV 253
L+QK AHLMEIQV+GGT+A+K+ +A E Q+PV+ VF +DEMI +I VTKGKGY+GV
Sbjct: 178 LRQK-AHLMEIQVSGGTMADKLGWAQERLELQVPVNQVFGQDEMIIVIDVTKGKGYKGVT 236
Query: 254 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+RW +LPRKTH+GLRKVACIGAWHPARV+F+VA+AGQ GYHHR E N K+YK+G+G
Sbjct: 237 SRWHTKKLPRKTHQGLRKVACIGAWHPARVAFSVAQAGQKGYHHRKETN-KIYKIGQG 293
>gi|395757075|ref|XP_002834695.2| PREDICTED: 60S ribosomal protein L3-like, partial [Pongo abelii]
Length = 264
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 163/238 (68%), Positives = 208/238 (87%), Gaps = 1/238 (0%)
Query: 74 THIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEE 133
THIVR+V++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E
Sbjct: 1 THIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDE 60
Query: 134 VRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG 193
+RRFYKNW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R +
Sbjct: 61 CKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP- 119
Query: 194 LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVV 253
L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV
Sbjct: 120 LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVT 179
Query: 254 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 180 SRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 237
>gi|71984544|ref|NP_001021255.1| Protein RPL-3, isoform c [Caenorhabditis elegans]
gi|51011806|emb|CAH10799.1| Protein RPL-3, isoform c [Caenorhabditis elegans]
Length = 353
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 213/306 (69%), Gaps = 52/306 (16%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVTI+ETPPM++ GV GYV TP+G R+L T+WA+HLSEE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+++ ++GKK I+A K+KKY S +RV+AHTQ
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQ------------- 167
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
MID IGVT+G G++GV +RW +
Sbjct: 168 ------------------------------------MIDTIGVTRGHGFKGVTSRWHTKK 191
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHT 317
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N K+Y++GK + +
Sbjct: 192 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNN 251
Query: 318 GITEFD 323
G TEFD
Sbjct: 252 GSTEFD 257
>gi|342180583|emb|CCC90059.1| putative ribosomal protein L3, mitochondrial [Trypanosoma
congolense IL3000]
Length = 428
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 173/307 (56%), Positives = 224/307 (72%), Gaps = 6/307 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGM-THIVRD 79
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKA H R
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAXYDAHCAR- 59
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
+PGSK++KKE E VTI+E PPM+VVG VGY +TP G +++ TVWA H S E RRRFY
Sbjct: 60 -RRPGSKVNKKEVVEPVTILEAPPMVVVGFVGYRQTPVGHKTIGTVWAHHTSVEFRRRFY 118
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQK 197
KNW +S + AFTK + T EG+ + L+ K A ++RV+AHTQ+RK++ + K
Sbjct: 119 KNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVK 178
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
KAH+ EIQ+NGGTIA+K++ A EK++ +D+VFQ+ E D+ VTKG G+ GVV RWG
Sbjct: 179 KAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWG 238
Query: 258 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG-GQESH 316
V LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKK+Y+LG+ E +
Sbjct: 239 VACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPN 298
Query: 317 TGITEFD 323
T +D
Sbjct: 299 QATTSYD 305
>gi|7159730|emb|CAB76201.1| ribosomal protein L3 [Homo sapiens]
Length = 343
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 161/236 (68%), Positives = 206/236 (87%), Gaps = 1/236 (0%)
Query: 76 IVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVR 135
IVR+V++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +
Sbjct: 1 IVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECK 60
Query: 136 RRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLK 195
RRFYKNW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+
Sbjct: 61 RRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LR 119
Query: 196 QKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 255
QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +R
Sbjct: 120 QKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSR 179
Query: 256 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
W +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 180 WHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 235
>gi|8572153|gb|AAF77028.1|AF247847_1 ribosomal protein L3 [Caenorhabditis briggsae]
Length = 246
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 162/247 (65%), Positives = 204/247 (82%), Gaps = 1/247 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAV+IIETPPM++ GV GY+ TP+G R+L T+WA+HLSEE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+++ ++GKK I+A K+KKY S +RV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+EIQ+NGGTI +KVD+A EKQI VD VF +DEMID IGVTKG G++GV +RW +
Sbjct: 180 LVEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKK 239
Query: 261 LPRKTHR 267
LPRKTH+
Sbjct: 240 LPRKTHK 246
>gi|167535326|ref|XP_001749337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772203|gb|EDQ85858.1| predicted protein [Monosiga brevicollis MX1]
Length = 419
Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 180/293 (61%), Positives = 224/293 (76%), Gaps = 1/293 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHG LGFLP+KR HRG++++FPK+ LTAFLGYKAGMTHIVRD++
Sbjct: 21 SHRKFRAPRHGHLGFLPKKRCKHHRGQIRSFPKEQKGDKPHLTAFLGYKAGMTHIVRDLD 80
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+ GS HKKE EAVT++ETPP++VVGVVGY TPRGLR L TVWA H++E RR YK+
Sbjct: 81 RTGSLAHKKEVVEAVTVVETPPIVVVGVVGYTSTPRGLRQLTTVWATHMAEGFIRRCYKH 140
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
+ SKK AF KY + T EG++ L ++ KY SV+RV+ HTQ++K+ L QKKAH+
Sbjct: 141 FAASKKAAFRKYFSKRNTPEGQQQFDDDLARMVKYCSVIRVIVHTQMKKLN-LGQKKAHV 199
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQ+NGG+I EKVD+A EK++P+ VF ++E IDIIGVTKG G+EGV RWG +L
Sbjct: 200 MEIQINGGSIQEKVDFAKSLLEKEVPIKDVFSQNEHIDIIGVTKGHGFEGVTHRWGTKKL 259
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
PRKTH+GLRKVACIGAWHPA V++ V RAGQ GYHHRTEMNKK+Y++G G E
Sbjct: 260 PRKTHKGLRKVACIGAWHPANVTYAVPRAGQRGYHHRTEMNKKIYRIGAGYHE 312
>gi|160331207|ref|XP_001712311.1| rpl3 [Hemiselmis andersenii]
gi|159765758|gb|ABW97986.1| rpl3 [Hemiselmis andersenii]
Length = 388
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 232/306 (75%), Gaps = 5/306 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLP+KR R +GK+K+FPKD+ + PC LTA +G+KAGMTH+VR V
Sbjct: 1 MSHRKYEAPRHGSLGFLPKKRCRRGKGKIKSFPKDNENHPCHLTASIGFKAGMTHVVRTV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWA-QHLSEEVRRRFY 139
+K GSKLH K+ EAVT+IETPP+ +VG VGY+KTP+GLRS TVW+ + EE +R FY
Sbjct: 61 DKFGSKLHGKDVVEAVTVIETPPLQIVGFVGYIKTPKGLRSFRTVWSTNNFPEEFKRNFY 120
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEK--IKKYASVVRVLAHTQIRKMKGLKQK 197
KNW KSK+KAF K K G + Q K IKK+ ++R +A ++I K GLKQK
Sbjct: 121 KNWYKSKRKAFKKKQKTELEYNGFSVFENQKIKFQIKKFCPIIRCIAFSKISKT-GLKQK 179
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
KA ++EIQ+NGG +K+++ +K+I + +F++ E+ID IG+TKGKG++GV+ RWG
Sbjct: 180 KAPVLEIQINGGNTTQKINFVEKISQKEISISDIFRQREIIDTIGITKGKGFQGVIKRWG 239
Query: 258 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHT 317
VT+LPRKTHRG RKVAC+G+WHP+RVSF V RAGQ G+HHRT++N ++Y++GK +S+
Sbjct: 240 VTKLPRKTHRGARKVACVGSWHPSRVSFRVPRAGQTGFHHRTQINLQIYRVGK-ALDSNN 298
Query: 318 GITEFD 323
G TEFD
Sbjct: 299 GSTEFD 304
>gi|78190647|gb|ABB29645.1| ribosomal protein 3 large subunit [Suberites fuscus]
Length = 313
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 160/248 (64%), Positives = 206/248 (83%), Gaps = 1/248 (0%)
Query: 76 IVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVR 135
I+R++ +PGSK HK E EAVTIIETPPMMVVGVVGY++TPRGLR + T++AQHL++E R
Sbjct: 1 ILREMNRPGSKSHKHEVVEAVTIIETPPMMVVGVVGYIETPRGLRPIKTIFAQHLNDECR 60
Query: 136 RRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLK 195
RRFYKNW SKKKAF+K S +++ + G+KSIQA +K+KKY V+RV+ HTQ+ + G++
Sbjct: 61 RRFYKNWFNSKKKAFSKASGRWKDEAGQKSIQADFDKLKKYCKVIRVICHTQVELLNGVR 120
Query: 196 QKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 255
QKKAH+MEIQVNGG+I++KVD+A EK IP+ +F KDEMIDIIGVTKGKG++GV +R
Sbjct: 121 QKKAHIMEIQVNGGSISDKVDWAKEHMEKAIPIKDLFNKDEMIDIIGVTKGKGFKGVTSR 180
Query: 256 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES 315
W +LPRKTH+GLRKVACIGAWHP+RVSF+VARAGQ GYHHRTE+NKK+Y++G +++
Sbjct: 181 WHCKKLPRKTHKGLRKVACIGAWHPSRVSFSVARAGQKGYHHRTEINKKIYRIG-DKEDN 239
Query: 316 HTGITEFD 323
TEFD
Sbjct: 240 ANAATEFD 247
>gi|399949966|gb|AFP65622.1| 60S ribosomal protein L3 [Chroomonas mesostigmatica CCMP1168]
Length = 388
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/306 (57%), Positives = 235/306 (76%), Gaps = 5/306 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLP+KR R +GK+K+FPKD + C LTA LGYKAGMTH+VR V
Sbjct: 1 MSHRKYESPRHGSLGFLPKKRCQRKKGKIKSFPKDSENSICHLTAALGYKAGMTHVVRTV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHL-SEEVRRRFY 139
+K GSKLH K+ EAVTI+ETPP+ ++G +GY+KTPRGLR+ T+W+ + EE RR FY
Sbjct: 61 DKLGSKLHGKDCVEAVTILETPPLEIIGYIGYIKTPRGLRAFRTIWSNSIFPEEFRRNFY 120
Query: 140 KNWCKSKKKAFTKYS--KQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQK 197
KNW KSKKKAF+K + K+ E + + Q + +IKK+ SV+R ++ ++I K GLKQK
Sbjct: 121 KNWYKSKKKAFSKKTNLKKMEFNFIEIENQKKKFQIKKFCSVIRCISFSKISKT-GLKQK 179
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
KA ++EIQVNGG EKVD+ F K+I + +F++ E+ID++G+TKGKG+EGV++RWG
Sbjct: 180 KAKILEIQVNGGNSMEKVDFIEKMFNKEISISDIFKQREIIDVVGITKGKGFEGVISRWG 239
Query: 258 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHT 317
VT+LPRKTHRG RKVAC+G+WHP+R+SF V RAGQNGYHHRT+ N ++YK+GK +
Sbjct: 240 VTKLPRKTHRGARKVACVGSWHPSRISFRVPRAGQNGYHHRTQNNIQIYKVGK-ASDPRN 298
Query: 318 GITEFD 323
T+FD
Sbjct: 299 ASTDFD 304
>gi|291410166|ref|XP_002721357.1| PREDICTED: ribosomal protein L3-like isoform 2 [Oryctolagus
cuniculus]
Length = 351
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 211/291 (72%), Gaps = 53/291 (18%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRK +++HRGKV PKDDPSKP LTAFLGYKAG+THIV++V
Sbjct: 1 MSHRKFSVPRHGSLGFLPRKCSSQHRGKV---PKDDPSKPVHLTAFLGYKAGLTHIVQEV 57
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGS+++KKE EAVTI+ETPPM+V+G+VGYV+TPRGLR+ ++A+H+S++ +RRFYK
Sbjct: 58 DRPGSEVNKKEVVEAVTIVETPPMVVMGIVGYVETPRGLRTFKMMFAEHISDKCKRRFYK 117
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKA H
Sbjct: 118 NWHKSKKKA--------------------------------------------------H 127
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV VF +DEMID+IGVTKGKGY+ V +RW +
Sbjct: 128 LMEIQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKAVTSRWHTKK 187
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LP KTHRGLRKVACIGAWHPARV+F+VA AGQ GYHHRTE+NKK+YK+G+G
Sbjct: 188 LPHKTHRGLRKVACIGAWHPARVAFSVAWAGQKGYHHRTEINKKIYKIGQG 238
>gi|384488486|gb|EIE80666.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
Length = 341
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/257 (67%), Positives = 216/257 (84%), Gaps = 4/257 (1%)
Query: 67 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVW 126
+GYKAGMTHIVRD+E+PGSK+HKKE EAVT+IE P M+VVGVVGYV+TPRGLRSL TVW
Sbjct: 1 MGYKAGMTHIVRDLERPGSKMHKKEIVEAVTVIEAPAMVVVGVVGYVETPRGLRSLTTVW 60
Query: 127 AQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHT 186
A+HLSEE +RRFYKNW +SKKKAFTKY+++Y EG K + +LE+IKKY SVVRV+AHT
Sbjct: 61 AEHLSEEAKRRFYKNWYRSKKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHT 118
Query: 187 QIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKG 246
QI K K L Q+KAH+MEIQ+NGG++ +KVD+A FEK++ V ++F++DEMIDII TKG
Sbjct: 119 QISKAK-LHQRKAHIMEIQLNGGSVEQKVDWAREHFEKEVTVGSIFEQDEMIDIIATTKG 177
Query: 247 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVY 306
G+EGV RWG +LPRKTHRGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKK+Y
Sbjct: 178 HGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIY 237
Query: 307 KLGKGGQESHTGITEFD 323
++ G ++ +G TE+D
Sbjct: 238 RIATGA-DAKSGTTEYD 253
>gi|440292698|gb|ELP85882.1| 60S ribosomal protein L3, putative [Entamoeba invadens IP1]
Length = 402
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/303 (55%), Positives = 221/303 (72%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL F PRKR R R AFPKD + LT FLG+KAGMTH++R+V
Sbjct: 1 MSHRKFEAPRHGSLAFHPRKRVHRLRAATSAFPKDKTTDKPHLTGFLGFKAGMTHVIREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ +KL K E VTIIETPPM+ VG VGY KT +GLR ++ V+A+H+S+E +RR+ K
Sbjct: 61 KRTNTKLPKDGILEPVTIIETPPMVCVGFVGYRKTVKGLRQMSVVFAEHISDEFKRRYSK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KS ++ F +++ Y + K + ++ +K A +R++AHTQ+ + LKQKKA
Sbjct: 121 NWKKSNRRQFAVHTETYNDVKVKAKRERIIKMMKNNADFIRIIAHTQM-ALVPLKQKKAE 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQVNGG+IA+K+D+A G EKQI VD++F KDE IDI+ VTKG G+ GV+ R+GV
Sbjct: 180 VMEIQVNGGSIADKIDFATGLLEKQISVDSIFGKDEPIDIVAVTKGHGFNGVIKRFGVRH 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVAC+GAWHPARV +TVARAGQ G+ RTE+NKK+Y++G G + T
Sbjct: 240 LPRKTHRGLRKVACVGAWHPARVGWTVARAGQMGFFKRTEVNKKIYRIGAGALRNAN--T 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|67472477|ref|XP_652042.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|67473369|ref|XP_652451.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|67475438|ref|XP_653413.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|167386238|ref|XP_001737679.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
gi|167388407|ref|XP_001738553.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
gi|56468865|gb|EAL46673.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56469305|gb|EAL47065.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56470361|gb|EAL48027.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165898153|gb|EDR25097.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
gi|165899449|gb|EDR26038.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
Length = 402
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 220/303 (72%), Gaps = 3/303 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL F PRKR + R V AFPKD+ ++ LT FLG+KAGMTH++R+V
Sbjct: 1 MSHRKFEAPRHGSLAFHPRKRVHKVRATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ +KL K E VTIIETPPM+V G VGY KT GL+ + V+A+H+++E +RR+ K
Sbjct: 61 KRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
W K+ K F ++++Y + K + Q+ IK VVRV+AHTQ+ + LKQKKA
Sbjct: 121 KWYKNTKNQFAVHTEKYNDVKAKSKRERQIRLIKNRCDVVRVIAHTQM-ALVPLKQKKAE 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+IAEKVD+A EKQI V++VF DE ID+ VTKG GY GV+ R+GV
Sbjct: 180 VMEIQINGGSIAEKVDFAVSLLEKQISVNSVFGTDECIDVCSVTKGHGYNGVIKRFGVRH 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVAC+GAWHPARVS+TVARAGQ G+ RTE+NKK+Y+LG G ++ T
Sbjct: 240 LPRKTHRGLRKVACVGAWHPARVSWTVARAGQMGFFKRTEVNKKIYRLGCGDLKN--AKT 297
Query: 321 EFD 323
EFD
Sbjct: 298 EFD 300
>gi|78190599|gb|ABB29621.1| ribosomal protein 3 large subunit [Priapulus caudatus]
Length = 319
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 157/236 (66%), Positives = 204/236 (86%), Gaps = 1/236 (0%)
Query: 76 IVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVR 135
IVR+VEKPGSKL+KKE EAVTIIETPP+++VGV+GY++TPRGLR+L TV+A+HLSE+ R
Sbjct: 1 IVREVEKPGSKLNKKEVVEAVTIIETPPLVIVGVIGYIETPRGLRTLKTVFAEHLSEDCR 60
Query: 136 RRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLK 195
RRFYKNW K+K+KAFTKY+K+++ + GKK I + EK+KKY +V+RV+AHTQ++ ++ +
Sbjct: 61 RRFYKNWYKAKRKAFTKYAKKWQDEVGKKQIDREFEKMKKYCTVIRVVAHTQMKLLRK-R 119
Query: 196 QKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 255
QKKAH+MEIQ+NGGTIAEKV +A EK +P+ +VF DEMID++GVTKG G++GV +R
Sbjct: 120 QKKAHIMEIQLNGGTIAEKVQWACDHLEKAVPISSVFAADEMIDMVGVTKGHGFKGVTSR 179
Query: 256 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
W +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKVY++ +G
Sbjct: 180 WHCKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKVYRIAEG 235
>gi|123445156|ref|XP_001311341.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121893146|gb|EAX98411.1| hypothetical protein TVAG_125550 [Trichomonas vaginalis G3]
Length = 415
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/325 (53%), Positives = 229/325 (70%), Gaps = 26/325 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PR GSLGFLPR R+ RG+V+++PKDD S+ L AF+GYKAGMTH++RDV
Sbjct: 1 MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+P S+LHKKE CE VTI+ETPPM VVG++GY T GL+ + TVWA +++EEV+R +YK
Sbjct: 61 VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTVEGLKPVTTVWASYVNEEVKRNYYK 120
Query: 141 NWCKSK-KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRK--------- 190
NW +SK +KAF+ S ++ +K QLEK++K A+V+RV+AHTQ K
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEKLQKEATVIRVIAHTQSAKTTTRGVDAN 176
Query: 191 -------MKG--LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 241
+KG L QKKAH++EIQ+NGG +A K++YA EK+I V VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236
Query: 242 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 301
GV KG G+EGV+ R+G RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296
Query: 302 NKKVYKLGKG---GQESHTGITEFD 323
NK++Y++G G+ + G T FD
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFD 321
>gi|154422961|ref|XP_001584492.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918739|gb|EAY23506.1| hypothetical protein TVAG_071700 [Trichomonas vaginalis G3]
Length = 415
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/325 (53%), Positives = 229/325 (70%), Gaps = 26/325 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PR GSLGFLPR R+ RG+V+++PKDD S+ L AF+GYKAGMTH++RDV
Sbjct: 1 MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+P S+LHKKE CE VTI+ETPPM VVG++GY T GL+ + TVWA +++EEV+R +YK
Sbjct: 61 VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTIEGLKPVTTVWASYVNEEVKRNYYK 120
Query: 141 NWCKSK-KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRK--------- 190
NW +SK +KAF+ S ++ +K QLE+++K A+V+RV+AHTQ K
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEELQKEATVIRVIAHTQSAKTTTRGVDAN 176
Query: 191 -------MKG--LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 241
+KG L QKKAH++EIQ+NGG +A K++YA EK+I V VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236
Query: 242 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 301
GV KG G+EGV+ R+G RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296
Query: 302 NKKVYKLGKG---GQESHTGITEFD 323
NK++Y++G G+ + G T FD
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFD 321
>gi|123440132|ref|XP_001310830.1| hypothetical protein [Trichomonas vaginalis G3]
gi|123470017|ref|XP_001318217.1| hypothetical protein [Trichomonas vaginalis G3]
gi|154419020|ref|XP_001582527.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121892616|gb|EAX97900.1| hypothetical protein TVAG_059650 [Trichomonas vaginalis G3]
gi|121900970|gb|EAY05994.1| hypothetical protein TVAG_124190 [Trichomonas vaginalis G3]
gi|121916763|gb|EAY21541.1| hypothetical protein TVAG_013060 [Trichomonas vaginalis G3]
Length = 415
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/325 (53%), Positives = 229/325 (70%), Gaps = 26/325 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PR GSLGFLPR R+ RG+V+++PKDD S+ L AF+GYKAGMTH++RDV
Sbjct: 1 MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+P S+LHKKE CE VTI+ETPPM VVG++GY T GL+ + TVWA +++EEV+R +YK
Sbjct: 61 VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTVEGLKPVTTVWASYVNEEVKRNYYK 120
Query: 141 NWCKSK-KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRK--------- 190
NW +SK +KAF+ S ++ +K QLE+++K A+V+RV+AHTQ K
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEELQKEATVIRVIAHTQSAKTTTRGVDAN 176
Query: 191 -------MKG--LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 241
+KG L QKKAH++EIQ+NGG +A K++YA EK+I V VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236
Query: 242 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 301
GV KG G+EGV+ R+G RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296
Query: 302 NKKVYKLGKG---GQESHTGITEFD 323
NK++Y++G G+ + G T FD
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFD 321
>gi|284073162|gb|ADB77820.1| 60S ribosomal protein L3 [Mesostigma viride]
Length = 225
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/228 (70%), Positives = 194/228 (85%), Gaps = 3/228 (1%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
KFEH R GSLGFLP+KRA R RGKVK+FPKDD ++ LTAF+G+KAGMTHI+R+V+KPG
Sbjct: 1 KFEHARCGSLGFLPKKRAKRMRGKVKSFPKDDRTQKPHLTAFMGFKAGMTHILREVDKPG 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
SKLHKKETCEAVTIIE P M+VVGV GY KT GL+++ TVWA+HL++EV+RRFYKNW K
Sbjct: 61 SKLHKKETCEAVTIIEVPAMVVVGVTGYAKTTGGLKTIGTVWAKHLNDEVKRRFYKNWYK 120
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
SKKKAFTKY+K+ E D K +Q LE++KKY+SV+R+LAHTQ+RK+ LKQKKAHLMEI
Sbjct: 121 SKKKAFTKYAKKVEND---KELQESLERLKKYSSVIRILAHTQVRKVPNLKQKKAHLMEI 177
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
QVNGG + KVD+AY FEK + VDA+F ++EMIDIIGVTKGKGY+GV
Sbjct: 178 QVNGGEVPAKVDFAYDLFEKAVNVDAIFAQNEMIDIIGVTKGKGYQGV 225
>gi|78190703|gb|ABB29673.1| ribosomal protein 3 large subunit [Leucosolenia sp. AR-2003]
Length = 319
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 154/236 (65%), Positives = 199/236 (84%), Gaps = 1/236 (0%)
Query: 76 IVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVR 135
IVR+V+KPGS+ HKKE EA TI+ETPPM+ VGVVGY++TPRGLR+ TVWA+HLS+E R
Sbjct: 1 IVREVDKPGSRNHKKEVVEAATILETPPMIAVGVVGYIETPRGLRTFKTVWAEHLSDECR 60
Query: 136 RRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLK 195
RRFYKNWCKSKKKAF++ S+++ +DEGK SI++ K+ KY V+R++A TQI K+ +
Sbjct: 61 RRFYKNWCKSKKKAFSRASQRWTSDEGKASIESDFAKMIKYCKVIRLIARTQI-KLVPIS 119
Query: 196 QKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 255
QKKAHLMEIQ+NGG+IA+K++YA EK + V+ VF +DEMID+IGVT+GKG++GV +R
Sbjct: 120 QKKAHLMEIQINGGSIADKINYARERLEKHMHVNKVFGQDEMIDVIGVTRGKGFKGVTSR 179
Query: 256 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
W +LPRKTH+GLRKVACIGAWHP+RV ++VARAGQ GYHHRTE+NKKVY++G G
Sbjct: 180 WHCKKLPRKTHKGLRKVACIGAWHPSRVQYSVARAGQKGYHHRTEVNKKVYRVGAG 235
>gi|284073164|gb|ADB77821.1| 60S ribosomal protein L3 [Ostreococcus tauri]
Length = 230
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 165/234 (70%), Positives = 201/234 (85%), Gaps = 4/234 (1%)
Query: 27 EHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 86
EH R+G+LGFLP+KR+ R RGKVK+FPKDD SKP LTAF+G+KAGMTH+VRDVEKPGSK
Sbjct: 1 EHARYGNLGFLPKKRSQRSRGKVKSFPKDDASKPPHLTAFMGFKAGMTHVVRDVEKPGSK 60
Query: 87 LHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
+HKKE C+AVTIIE P ++VVG+VGYV+TP+GLR TVWA+HL++E+RRRFYKNW KSK
Sbjct: 61 MHKKEQCDAVTIIECPELVVVGLVGYVRTPKGLRGKKTVWAEHLNDEIRRRFYKNWFKSK 120
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
KKAFTKY+K Y SI+ LE++KK V+RV+AHTQ+RK+KGLKQKKAH+MEIQV
Sbjct: 121 KKAFTKYAKNYTNG----SIEKDLEELKKSCDVIRVIAHTQVRKVKGLKQKKAHIMEIQV 176
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
NGG A KVD+ + FEK +PVD+VFQ+DEMID+IGVTKGKG++GVVTRWGVTR
Sbjct: 177 NGGDAAAKVDFGFALFEKTVPVDSVFQQDEMIDLIGVTKGKGFQGVVTRWGVTR 230
>gi|308160270|gb|EFO62765.1| Ribosomal protein L3 [Giardia lamblia P15]
Length = 379
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/304 (54%), Positives = 212/304 (69%), Gaps = 6/304 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF R G+LG+LPRKR R RG+ KAFP D P LTAFLGYKAG TH++R +
Sbjct: 1 MSHRKFSCCRKGNLGYLPRKRCTRGRGRCKAFPPDVQGAPIHLTAFLGYKAGCTHVMRFI 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+ GS LH ++ + TII+ PPM+ ++GY KTP+GLR++ TVWA H++E RRFY+
Sbjct: 61 DHRGSNLHNRQAIDQATIIDAPPMICTAIIGYAKTPKGLRAVTTVWAAHIAEPAMRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N+ ++K AF+ Y K+ I+ QL ++K++A V+R++AHTQ + LKQKKA
Sbjct: 121 NYFHAEKTAFSTYMKKAADGT---YIKEQLGRLKQHADVIRIVAHTQ-PALTPLKQKKAD 176
Query: 201 LMEIQVNGG-TIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
+MEIQVNGG +AEKVDYAY EK I + VF ID I +T+G+G+EGVVTRWGVT
Sbjct: 177 IMEIQVNGGANVAEKVDYAYALMEKPISIKDVFSVGAQIDTISITRGRGFEGVVTRWGVT 236
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
RLPRKT RG RKVACIGAWHPA V +TVARAGQ GY HRT+ NK+V+ + +
Sbjct: 237 RLPRKTRRGNRKVACIGAWHPANVQYTVARAGQMGYFHRTDTNKQVFMIDT-AENPKCCT 295
Query: 320 TEFD 323
TEFD
Sbjct: 296 TEFD 299
>gi|42565416|gb|AAS20981.1| ribosomal protein L3 [Hyacinthus orientalis]
Length = 263
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/175 (89%), Positives = 168/175 (96%)
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
AFTKYS +YE+D+GKK IQ QL+K+KKYA+V+RVLAHTQ+RKMKGLKQKKAHLMEIQVNG
Sbjct: 4 AFTKYSNKYESDDGKKEIQTQLDKMKKYATVIRVLAHTQLRKMKGLKQKKAHLMEIQVNG 63
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG
Sbjct: 64 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 123
Query: 269 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
LRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y+LGK G ESH +TEFD
Sbjct: 124 LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYRLGKSGDESHQAVTEFD 178
>gi|123495590|ref|XP_001326781.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909700|gb|EAY14558.1| hypothetical protein TVAG_388910 [Trichomonas vaginalis G3]
Length = 415
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/325 (53%), Positives = 228/325 (70%), Gaps = 26/325 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PR GSLGFLPR R+ RG+V+++PKDD S+ L AF+GYKAGMTH++RDV
Sbjct: 1 MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+P S+LHKKE CE VTI+ETPPM VVG++GY T GL+ + TVWA +++EEV+R +YK
Sbjct: 61 VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTVEGLKPVTTVWASYVNEEVKRNYYK 120
Query: 141 NWCKSK-KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRK--------- 190
NW +SK +KAF+ S ++ +K QLE+++K A+V+RV+AHTQ K
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEELQKEATVIRVIAHTQSAKTTTRGVDAN 176
Query: 191 -------MKG--LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 241
+KG L QKKAH++E Q+NGG +A K++YA EK+I V VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIENQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236
Query: 242 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 301
GV KG G+EGV+ R+G RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296
Query: 302 NKKVYKLGKG---GQESHTGITEFD 323
NK++Y++G G+ + G T FD
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFD 321
>gi|426354157|ref|XP_004044534.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Gorilla gorilla
gorilla]
Length = 351
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 155/239 (64%), Positives = 200/239 (83%), Gaps = 1/239 (0%)
Query: 73 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSE 132
MTHI+R+V++P SK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S
Sbjct: 1 MTHIMREVDRPASKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISN 60
Query: 133 EVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMK 192
E +RRFYKNW KSKKKAFTKY K+++ ++ KK ++ +KKY V+RV+AHTQ+R +
Sbjct: 61 ECKRRFYKNWHKSKKKAFTKYCKKWQDEDVKKQLEEDFSSMKKYCHVIRVIAHTQMRLLP 120
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
L+QKKAHLMEIQVNGGT+AEK+D+ E+Q+ V+ VF +DEMID+IGVTKG GY+GV
Sbjct: 121 -LRQKKAHLMEIQVNGGTVAEKLDWVRERLEQQVNVNQVFGQDEMIDVIGVTKGNGYKGV 179
Query: 253 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+RW +LP KTHRGLRKVACIGAWHPARV+F+VARAGQ G HRTE+NKK+YK+G+G
Sbjct: 180 TSRWHTKKLPLKTHRGLRKVACIGAWHPARVAFSVARAGQKGNRHRTEINKKIYKIGQG 238
>gi|159109947|ref|XP_001705236.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803]
gi|157433317|gb|EDO77562.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803]
Length = 379
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 164/304 (53%), Positives = 211/304 (69%), Gaps = 6/304 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF R G+LG+LPRKR R RG+ K FP D P LTAFLGYKAG TH++R +
Sbjct: 1 MSHRKFSCCRKGNLGYLPRKRCTRGRGRCKTFPPDVQGAPIHLTAFLGYKAGCTHVMRFI 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+ GS LH ++ + TII+ PPM+ ++GY KTP+GLR++ TVWA H++E RRFY+
Sbjct: 61 DHRGSNLHNRQAIDQATIIDAPPMICTAIIGYAKTPKGLRAVTTVWAAHIAEPAMRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N+ ++K AF+ Y K+ I+ QL ++K++A V+R++AHTQ + LKQKKA
Sbjct: 121 NYFHAEKTAFSTYMKKAADGT---YIKEQLGRLKQHADVIRIVAHTQ-PALTPLKQKKAD 176
Query: 201 LMEIQVNGG-TIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
+MEIQVNGG +AEKVDYAY EK I + VF ID I +T+G+G+EGVVTRWGVT
Sbjct: 177 IMEIQVNGGANVAEKVDYAYALMEKPISIKDVFSVGAQIDTISITRGRGFEGVVTRWGVT 236
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
RLPRKT RG RKVACIGAWHPA V +TVARAGQ GY HRT+ NK+V+ + +
Sbjct: 237 RLPRKTRRGNRKVACIGAWHPANVQYTVARAGQMGYFHRTDTNKQVFMIDT-AENPRCCT 295
Query: 320 TEFD 323
TEFD
Sbjct: 296 TEFD 299
>gi|253747835|gb|EET02309.1| Ribosomal protein L3 [Giardia intestinalis ATCC 50581]
Length = 379
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 163/304 (53%), Positives = 213/304 (70%), Gaps = 6/304 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF R G+LG+LPRKR R RG+ K FP D P LTAFLGYKAG TH++R +
Sbjct: 1 MSHRKFSCCRKGNLGYLPRKRCTRGRGRCKTFPPDVQGTPIHLTAFLGYKAGCTHVMRFI 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+ GS LH ++ + TII+ PPM+ ++GY KTP+GLR++ TVWA H++E RRFY+
Sbjct: 61 DHRGSNLHNRQAIDQATIIDAPPMICTAIIGYAKTPKGLRAVTTVWAAHIAEPAMRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N+ + K AF+ Y K+ I+ QL ++K++A V+R++AHTQ + LKQKKA
Sbjct: 121 NYFHANKTAFSTYMKKAADGT---YIKEQLGRLKEHADVIRIVAHTQ-PALTPLKQKKAD 176
Query: 201 LMEIQVNGG-TIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
+MEIQVNGG ++AEKVDYAY EK I + VF+ + ID I +T+G+G+EGVVTRWGVT
Sbjct: 177 IMEIQVNGGKSVAEKVDYAYALMEKPISIKDVFEVGKQIDTISITRGRGFEGVVTRWGVT 236
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
RLPRKT RG RKVACIG+WHPA V +TVARAGQ GY HRT+ NK+V+ + +
Sbjct: 237 RLPRKTRRGNRKVACIGSWHPANVQYTVARAGQMGYFHRTDTNKQVFMIDT-AENPRCCT 295
Query: 320 TEFD 323
TEFD
Sbjct: 296 TEFD 299
>gi|188572498|gb|ACD65155.1| putative 60S ribosomal protein RPL3 [Phoronis muelleri]
Length = 223
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/224 (69%), Positives = 191/224 (85%), Gaps = 1/224 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSL FLP+KR+ RHRGK KAFPKDD SKP LTAFLGYKAGM+HIVRDV
Sbjct: 1 MSHRKFSAPRHGSLAFLPKKRSVRHRGKCKAFPKDDSSKPVHLTAFLGYKAGMSHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK +KKE EAVTI+ETPPM+ VGVVGY++TP+GLR+ TVWA+HLSEE RRRFYK
Sbjct: 61 DRPGSKANKKEVVEAVTIVETPPMIAVGVVGYIETPKGLRTFKTVWAEHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ D+GK++I+ L K+KKY VVRV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKYGKKWKDDDGKQAIEKDLNKMKKYCKVVRVIAHTQMKLLKK-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVT 244
+MEIQ+NGGT+A+KVD+A E+++PV +VF DEMID+IGVT
Sbjct: 180 IMEIQLNGGTVAQKVDWAREHLEQKLPVKSVFAXDEMIDVIGVT 223
>gi|324523353|gb|ADY48234.1| 60S ribosomal protein L3, partial [Ascaris suum]
Length = 264
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 157/238 (65%), Positives = 198/238 (83%), Gaps = 2/238 (0%)
Query: 19 RRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR 78
R MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+G+KAGMTHIVR
Sbjct: 2 RTMSHRKFSAPRHGSMGFTPKKRSRRHRGKVKAFPKDDPTKPIHLTAFIGFKAGMTHIVR 61
Query: 79 DVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF 138
+V+KPGSK++KKE EAVTI+ETPPM++VG+VGY+ TPRG R TVWA+HLSE+ RRRF
Sbjct: 62 EVDKPGSKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRRRF 121
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
YKNW SKKKAF K++K+++ ++G+KSI++ L K+KKY S +RV+AHTQ++ MK ++KK
Sbjct: 122 YKNWHTSKKKAFQKHAKKWQDEDGRKSIESDLNKMKKYCSKIRVIAHTQMKVMK-HREKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
AH+MEIQVNGGT+ EKVD+A EKQ+ VD+VF +DEMID IGVTKG Y G +W
Sbjct: 181 AHIMEIQVNGGTVPEKVDWAKEHLEKQVAVDSVFAQDEMIDCIGVTKGT-YHGDPGQW 237
>gi|378756821|gb|EHY66845.1| ribosomal protein L3 [Nematocida sp. 1 ERTm2]
Length = 394
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/303 (55%), Positives = 219/303 (72%), Gaps = 5/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLPRKRA R R ++ ++P+DD ++ LT + YKAGMTH++R
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAERIRPRIPSYPQDDATQKVHLTTYFAYKAGMTHVLRVG 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+ GSKL+KKE + VTI+ETP +V GVVGY KTPRGL ++ TV A+H+ E V+RR+YK
Sbjct: 61 EREGSKLNKKEIIDPVTILETPKCVVFGVVGYKKTPRGLVNVKTVLAEHIDESVKRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+ +SKK A + Y +Y+ ++ IQA I+ A V+RVL H+Q K+K L KKAH
Sbjct: 121 RYYRSKKTALSNYPLKYKNGVIEQEIQA----IRDNADVIRVLIHSQAPKIKILNTKKAH 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME Q+NGGTI EK+D+A FEK+I F ++EMIDIIGVTKGKG+E RWG T
Sbjct: 177 IMESQLNGGTIQEKIDFALAHFEKEISSQDCFSREEMIDIIGVTKGKGFESCTKRWGTTI 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKT++GLRKVACIGAWHP+RV ++V RAGQ G+HHR NK+VY +G GQ + T
Sbjct: 237 LPRKTNKGLRKVACIGAWHPSRVMYSVPRAGQTGFHHRVMQNKRVYLMGD-GQSTDACKT 295
Query: 321 EFD 323
E+D
Sbjct: 296 EYD 298
>gi|429962137|gb|ELA41681.1| hypothetical protein VICG_01314 [Vittaforma corneae ATCC 50505]
Length = 383
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/305 (52%), Positives = 217/305 (71%), Gaps = 13/305 (4%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MS RKF PRHGSL F P++RA+ R +KAFP+DD ++PC LTAFL YKAGMTH++R
Sbjct: 1 MSCRKFRAPRHGSLQFRPKRRASSIRPSIKAFPRDDSTQPCHLTAFLSYKAGMTHVIRSK 60
Query: 81 E-KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEV-RRRF 138
E K +K KE EAVTI+ETPPM++ GVVGY +T GL+ V A+H+SE V RR F
Sbjct: 61 EVKSKTKSQTKELLEAVTILETPPMVIHGVVGYQRTIGGLKRTKVVLAEHMSEGVIRRMF 120
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
K + K + + + D+ +E++KK + V+RVLAH+Q+ K++ + QKK
Sbjct: 121 TKRFVPGMKYTDLRKTVGFSQDD--------IEELKKTSDVIRVLAHSQVYKIRPIHQKK 172
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
AH+ EIQVNGG+I+EKVD+A E++IP+ VF ++E+ID IGVTKGKG++GV+ RWGV
Sbjct: 173 AHIAEIQVNGGSISEKVDFAIERLEREIPISEVFSENELIDTIGVTKGKGFQGVIKRWGV 232
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
LPRKT++G+RKVACIGAWHP+RV ++VARAGQ G+H RT+MN VY +G G
Sbjct: 233 RILPRKTNKGIRKVACIGAWHPSRVMYSVARAGQLGFHRRTQMNLAVYAIGNGNDPV--- 289
Query: 319 ITEFD 323
+T+FD
Sbjct: 290 VTDFD 294
>gi|358339475|dbj|GAA47534.1| 60S ribosomal protein L3 [Clonorchis sinensis]
Length = 276
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 159/278 (57%), Positives = 193/278 (69%), Gaps = 50/278 (17%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+GF P+KR+ R RGK KAFPKD S P LTAFLGYKAGMTHIVR+V++PGSK+HK+E
Sbjct: 1 MGFTPKKRSRRIRGKCKAFPKDRRSLPPHLTAFLGYKAGMTHIVREVDRPGSKVHKREIV 60
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
E VTI+E PPM++VG+VGY T RGLR+ TVWA+HL+EE RRRFYK+WCKSK
Sbjct: 61 EPVTILECPPMVIVGLVGYAPTARGLRTFKTVWAEHLTEECRRRFYKDWCKSK------- 113
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
KKAH+MEIQVNGGT+++
Sbjct: 114 -------------------------------------------KKAHIMEIQVNGGTVSQ 130
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
KVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 131 KVDWIRQHFEKQIPIVNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 190
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
CIG+WHPARV TVARAGQ GY HRTE+NKK+Y++G G
Sbjct: 191 CIGSWHPARVGSTVARAGQKGYFHRTELNKKIYRIGLG 228
>gi|387594270|gb|EIJ89294.1| 60s ribosomal protein l3 [Nematocida parisii ERTm3]
gi|387595016|gb|EIJ92643.1| 60s ribosomal protein l3 [Nematocida parisii ERTm1]
Length = 393
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/303 (54%), Positives = 220/303 (72%), Gaps = 5/303 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL FLPRKRA R R ++ ++P+DD ++ LT + YKAGMTH++R
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAERIRPRIPSYPQDDETQKVHLTTYFAYKAGMTHVLRVG 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
E+ GSKL+K+E + VTI+ETP +V G+VGY KTPRGL ++ TV A+H+ E V+RR+YK
Sbjct: 61 EREGSKLNKREIIDPVTILETPKCVVFGLVGYKKTPRGLVNVKTVLAEHIDESVKRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+ +SKK A + Y +Y+ ++ IQA I+ A V+RVL H+Q K+K L KKAH
Sbjct: 121 RYYRSKKTALSNYPLKYKNGVIEQEIQA----IRDNADVIRVLIHSQAPKIKALNTKKAH 176
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME Q+NGG+I +K+D+A FEK+I F K+EMIDIIGVTKGKG++ RWG T
Sbjct: 177 IMESQLNGGSIQDKIDFALSNFEKEISAPDCFSKEEMIDIIGVTKGKGFQSCTKRWGTTI 236
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKT++GLRKVACIGAWHP+RV ++V RAGQ G+HHR NK+VY +G GQ + + T
Sbjct: 237 LPRKTNKGLRKVACIGAWHPSRVMYSVPRAGQTGFHHRVMQNKRVYLVGD-GQSTDSCKT 295
Query: 321 EFD 323
E+D
Sbjct: 296 EYD 298
>gi|217069808|gb|ACJ83264.1| unknown [Medicago truncatula]
Length = 177
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/177 (90%), Positives = 173/177 (97%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KP +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCE VTIIETPPM+VVGVVGYVKTPRGLR+LNTVW QHLSEE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQK 197
NWCKSKKKAF+KYSKQYE+DEGKK+IQ QLEK+KKYA+V+RVLAHTQIRKMKGLKQK
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQK 177
>gi|226480250|emb|CAX78789.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 228
Score = 313 bits (801), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 151/227 (66%), Positives = 183/227 (80%), Gaps = 1/227 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E E VTI+E PPM++VG+VGY T +GLR+ TVWA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WCKSKKKAFTK S+++ + G I L+KIKKY +VVR +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGK 247
+MEIQVNGGTI++KVD+ FEKQIPV VF +DEMID+IGVTKGK
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGK 226
>gi|124783060|gb|ABN14901.1| ribosomal protein L3, partial [Taenia asiatica]
Length = 224
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/225 (65%), Positives = 185/225 (82%), Gaps = 1/225 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF P+KR+ R RGK KAFPKD S P LTAF+G+KAGMTH+VRDV
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRSRRIRGKCKAFPKDRRSLPPHLTAFMGFKAGMTHVVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HKKE E VTI+E PPM++VG+VGY+ T RGLR+ T+WA+HLSEE RRRFYK
Sbjct: 61 DRPGSKVHKKEIIEPVTILECPPMVIVGIVGYIPTARGLRTFKTIWAEHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
++CKSK+KAFTK SK++ + G +I ++K+KKY SV+RV+AHTQ+R MK +QKKAH
Sbjct: 121 DFCKSKRKAFTKASKKWADEAGLAAINNDIKKMKKYCSVIRVIAHTQMRLMKH-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTK 245
+MEIQVNGGT+A+KVD+A EKQ+PV VF +DEMID+IGVTK
Sbjct: 180 IMEIQVNGGTVAQKVDWAREHLEKQVPVANVFAQDEMIDVIGVTK 224
>gi|145497857|ref|XP_001434917.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402045|emb|CAK67520.1| unnamed protein product [Paramecium tetraurelia]
Length = 341
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 146/251 (58%), Positives = 193/251 (76%), Gaps = 5/251 (1%)
Query: 73 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSE 132
MTHI+R VE+PGSKL+ KE EAVTI+ETPP+ VVG+VGY++TPRGLR+L TVW+ +++
Sbjct: 1 MTHILRTVERPGSKLNGKEVVEAVTIVETPPLAVVGIVGYIETPRGLRALTTVWSTKIAK 60
Query: 133 EVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMK 192
+ RRFYKNW SKKKAFT Y+K + K+++ QL++I KY VVRV+ HTQ+ K+
Sbjct: 61 DTLRRFYKNWINSKKKAFTNYNK---ANAEPKNLETQLKRIVKYCQVVRVIVHTQMSKL- 116
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
L+QKK H+ E+QVNGGT +KV+YA G EK++ VD VF+++E ID++GVTKGKG GV
Sbjct: 117 NLRQKKNHVFEVQVNGGTTEQKVNYAKGLLEKEVKVDQVFKQNEQIDVLGVTKGKGVAGV 176
Query: 253 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG 312
+ R+GV L +KTHRG R+V CIG WHPA V ++VAR GQ GYHHRTEMNKK+Y++G G
Sbjct: 177 IKRFGVKHLQKKTHRGWRRVGCIGGWHPANVRYSVARTGQLGYHHRTEMNKKIYRIGAAG 236
Query: 313 QESHTGITEFD 323
+ +T TE D
Sbjct: 237 -DKNTASTEAD 246
>gi|284073160|gb|ADB77819.1| 60S ribosomal protein L3 [Klebsormidium flaccidum]
Length = 204
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 178/204 (87%), Gaps = 1/204 (0%)
Query: 26 FEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 85
FEH RHGSLGFLP+KRA R RGKVK++ KDDPSK +L AFLGYKAGMTHI+RDV+KPGS
Sbjct: 1 FEHARHGSLGFLPKKRAKRIRGKVKSWAKDDPSKAPQLQAFLGYKAGMTHIMRDVDKPGS 60
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKS 145
KLHKKETCEAVTI+ETPPM++VGVVGY+KTPRGLRSL TVWAQHL E V+RRFYK + +S
Sbjct: 61 KLHKKETCEAVTIVETPPMVIVGVVGYIKTPRGLRSLATVWAQHLDESVKRRFYKRFGQS 120
Query: 146 KKKAFTKYSK-QYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
KKKAFTKY K +Y EGKK + + LE+IKKY SVVRVLAHTQ++ +KG+ QKKAHLME+
Sbjct: 121 KKKAFTKYVKSKYGDGEGKKGVDSDLERIKKYCSVVRVLAHTQVKLIKGIGQKKAHLMEV 180
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPV 228
Q+NGG++A+KVD+A +FEK++ V
Sbjct: 181 QINGGSVADKVDFAVKYFEKKVGV 204
>gi|255098787|gb|ACU00734.1| 60S ribosomal protein L3 [Nosema bombycis]
gi|326573816|gb|ADZ95674.1| 60S ribosomal protein L3 [Nosema bombycis]
Length = 384
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/305 (53%), Positives = 211/305 (69%), Gaps = 14/305 (4%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 79
MS RKF PRHGSL F PRKR+ + ++AFPKD + LTAF+GYKAGMTH+VR
Sbjct: 1 MSCRKFNAPRHGSLAFGPRKRSKTIKPSIRAFPKDVQEEKIHLTAFIGYKAGMTHVVRSK 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRR-F 138
+ + +K KE +AVT+IETPPM++ GV GY T +GL + TV A H+ E VRRR F
Sbjct: 61 IIQTKNKQLSKEIMDAVTLIETPPMVIYGVTGYEVTGKGLNRIATVLAPHIDESVRRREF 120
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
K W + + K+Y ++ +K LE+I+K ASV+R+LAHTQ K+ L KK
Sbjct: 121 GKRW-----EQLSANIKEYNKEKAEKD----LEEIRKRASVIRILAHTQPTKIPALHLKK 171
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
+H+ EIQVNGGTI EKVD+A FEK++ +D VF+ +E +D IGVTKGKG++GVV R+GV
Sbjct: 172 SHISEIQVNGGTINEKVDWALDKFEKEVTIDEVFEVNENLDTIGVTKGKGFQGVVKRFGV 231
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
T PRK+ +G+RKVACIGAWHP+RV TVARAGQ G+H RTE NKKVY +G G +
Sbjct: 232 TIQPRKSRKGIRKVACIGAWHPSRVMTTVARAGQMGFHRRTETNKKVYMIGNGNELIK-- 289
Query: 319 ITEFD 323
TEFD
Sbjct: 290 -TEFD 293
>gi|222424540|dbj|BAH20225.1| AT1G61580 [Arabidopsis thaliana]
Length = 257
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 144/170 (84%), Positives = 161/170 (94%)
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
SK++ET+EGKK IQ+QLEK+KKY SV+RVLAHTQIRKMKGLKQKKAHL EIQ+NGG IA+
Sbjct: 1 SKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLNEIQINGGDIAK 60
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
KVDYA FEKQ+PVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA
Sbjct: 61 KVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 120
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
CIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY++GK GQE+H+ +TE+D
Sbjct: 121 CIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYD 170
>gi|167377647|ref|XP_001734483.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
gi|165904006|gb|EDR29379.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
Length = 381
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 200/278 (71%), Gaps = 3/278 (1%)
Query: 46 RGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMM 105
+ V AFPKD+ ++ LT FLG+KAGMTH++R+V++ +KL K E VTIIETPPM+
Sbjct: 5 KATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREVKRTNTKLPKDGVLEPVTIIETPPMV 64
Query: 106 VVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKS 165
V G VGY KT GL+ + V+A+H+++E +RR+ K W K+ K F ++++Y + K
Sbjct: 65 VAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTKKWYKNTKNQFAVHTEKYNDVKAKSK 124
Query: 166 IQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQ 225
+ Q+ IK VVRV+AHTQ+ + LKQKKA +MEIQ+NGG+IAEKVD+A EKQ
Sbjct: 125 RERQIRLIKNRCDVVRVIAHTQM-ALVPLKQKKAEVMEIQINGGSIAEKVDFAVSLLEKQ 183
Query: 226 IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSF 285
I V++VF DE ID+ VTKG GY GV+ R+GV LPRKTHRGLRKVAC+GAWHPARVS+
Sbjct: 184 ISVNSVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLPRKTHRGLRKVACVGAWHPARVSW 243
Query: 286 TVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
TVARAGQ G+ RTE+NKK+Y+LG G + TEFD
Sbjct: 244 TVARAGQMGFFKRTEVNKKIYRLGCG--DLKNAKTEFD 279
>gi|56541782|emb|CAI30273.1| hypothetical protein [Pongo abelii]
Length = 202
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 141/198 (71%), Positives = 175/198 (88%), Gaps = 1/198 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMR-LLPLRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYA 218
LMEIQVNGGT+AEK+D+A
Sbjct: 180 LMEIQVNGGTVAEKLDWA 197
>gi|358443180|gb|AEU11836.1| control protein HCTL036 [Eueides isabella]
Length = 217
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 47 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMV 106
GKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE EAVT+IETPPM+
Sbjct: 1 GKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60
Query: 107 VGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSI 166
VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYKNW K KKKAFTK SK+++ + G+KSI
Sbjct: 61 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSSKKWQDELGRKSI 120
Query: 167 QAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQI 226
+ +K+ +Y SV+RV+AHTQ++ +K +QKKAH+MEIQVNGG I +KV +A EK I
Sbjct: 121 EKDFKKMIRYCSVIRVIAHTQMKLLKQ-RQKKAHIMEIQVNGGNIEDKVKWAREHLEKPI 179
Query: 227 PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
PVD+VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 180 PVDSVFTQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217
>gi|226475912|emb|CAX72046.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 341
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 176/215 (81%), Gaps = 1/215 (0%)
Query: 99 IETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYE 158
+E PPM++VG+VGY T +GLR+ TVWA+HL+EE RRRFYK+WCKSKKKAFTK S+++
Sbjct: 1 MECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYKDWCKSKKKAFTKASRKWA 60
Query: 159 TDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYA 218
+ G I L+KIKKY +VVR +AHTQ+R MK +QKKAH+MEIQVNGGTI++KVD+
Sbjct: 61 DEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAHIMEIQVNGGTISQKVDWI 119
Query: 219 YGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 278
FEKQIPV VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVACIGAW
Sbjct: 120 RQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 179
Query: 279 HPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
HPARV+ +V RAGQ GY HRTE+NKK+Y++G G Q
Sbjct: 180 HPARVARSVTRAGQKGYFHRTELNKKIYRIGMGLQ 214
>gi|358443186|gb|AEU11839.1| control protein HCTL036 [Heliconius aoede]
Length = 217
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 47 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMV 106
GKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE EAVT+IETPPM+
Sbjct: 1 GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60
Query: 107 VGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSI 166
VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYKNW KSKKKAFTK SK+++ + G+KSI
Sbjct: 61 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKSKKKAFTKSSKKWQDELGRKSI 120
Query: 167 QAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQI 226
+ +K+ +Y SV+RV+AHTQ++ +K +QKKAH+MEIQVNGG I +KV +A EK I
Sbjct: 121 EKDFKKMIRYCSVIRVIAHTQMKLLKQ-RQKKAHIMEIQVNGGNIEDKVKWAREHLEKPI 179
Query: 227 PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
PVD+VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 180 PVDSVFTQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217
>gi|310771890|emb|CBH28886.1| 60S RIBOSOMAL PROTEIN L3 [Anncaliia algerae]
Length = 381
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/303 (50%), Positives = 200/303 (66%), Gaps = 8/303 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MS RKFE PRHGSL F P+KRA + +K+F KDDP P LT F YKAGMTHIVR+
Sbjct: 1 MSCRKFEAPRHGSLAFCPKKRAKSVKQSIKSFEKDDPQSPIHLTGFYVYKAGMTHIVRNK 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
K KE EAVT++E PPM+V G+ GYV T GL+ T+ + H+++ V RRF K
Sbjct: 61 IMKDKKSTVKEILEAVTVLEAPPMVVFGIQGYVNTSEGLKLKTTLISSHVNQSVIRRFLK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N+ S +K +K +E + I I K +RV+ HTQI ++K +K KKAH
Sbjct: 121 NFYTSSRKDMGSITKAITKEETDEKIA-----ILKECDSIRVMMHTQIDRIKQIKTKKAH 175
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ EIQVNGG++A+KV++A EK++ V VF ++++ID+IGVTKGKG+ GV R+G
Sbjct: 176 ISEIQVNGGSVADKVEWAVSMLEKEVKVTDVFGENDLIDVIGVTKGKGFNGVTKRFGTKI 235
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKT++G RKVACIGAWHPA V ++V RAGQ G+H RTE NK VYKLG G Q T
Sbjct: 236 LPRKTNKGKRKVACIGAWHPANVLYSVPRAGQLGFHRRTEYNKMVYKLGNGKQSIK---T 292
Query: 321 EFD 323
E+D
Sbjct: 293 EYD 295
>gi|344248331|gb|EGW04435.1| 60S ribosomal protein L3-like [Cricetulus griseus]
Length = 363
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/239 (61%), Positives = 192/239 (80%), Gaps = 1/239 (0%)
Query: 73 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSE 132
MTH +R+V +PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+
Sbjct: 1 MTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSD 60
Query: 133 EVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMK 192
E RRRFY++W KSKKKAFTK K++ GKK +Q +KKY V+RV+ HTQ+ K+
Sbjct: 61 ECRRRFYRDWHKSKKKAFTKACKRWRDPSGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLL 119
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
+QKKAH+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV
Sbjct: 120 PFRQKKAHIMEIQLNGGTVAEKVAWAQAQLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGV 179
Query: 253 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 180 TSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 238
>gi|358443184|gb|AEU11838.1| control protein HCTL036 [Heliconius hecale]
Length = 217
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 47 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMV 106
GKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE EAVT+IETPPM+
Sbjct: 1 GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60
Query: 107 VGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSI 166
VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYKNW K KKKAFTK SK+++ + G+KSI
Sbjct: 61 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSSKKWQDELGRKSI 120
Query: 167 QAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQI 226
+ +K+ +Y SVVRV+AHTQ++ +K +QKKAH+MEIQVNGG I +KV +A EK I
Sbjct: 121 EKDFKKMIRYCSVVRVIAHTQMKLLKQ-RQKKAHIMEIQVNGGNIEDKVKWAREHLEKPI 179
Query: 227 PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
PVD+VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 180 PVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217
>gi|358443188|gb|AEU11840.1| control protein HCTL036 [Heliconius burneyi]
gi|358443190|gb|AEU11841.1| control protein HCTL036 [Heliconius doris]
gi|358443192|gb|AEU11842.1| control protein HCTL036 [Heliconius xanthocles]
gi|358443196|gb|AEU11844.1| control protein HCTL036 [Heliconius hortense]
gi|358443198|gb|AEU11845.1| control protein HCTL036 [Heliconius hewitsoni]
gi|358443202|gb|AEU11847.1| control protein HCTL036 [Heliconius sara]
gi|358443204|gb|AEU11848.1| control protein HCTL036 [Heliconius demeter]
gi|358443206|gb|AEU11849.1| control protein HCTL036 [Heliconius charithonia]
Length = 217
Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 47 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMV 106
GKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE EAVT+IETPPM+
Sbjct: 1 GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60
Query: 107 VGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSI 166
VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYKNW K KKKAFTK SK+++ + G+KSI
Sbjct: 61 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSSKKWQDELGRKSI 120
Query: 167 QAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQI 226
+ +K+ +Y SV+RV+AHTQ++ +K +QKKAH+MEIQVNGG I +KV +A EK I
Sbjct: 121 EKDFKKMIRYCSVIRVIAHTQMKLLKQ-RQKKAHIMEIQVNGGNIEDKVKWAREHLEKPI 179
Query: 227 PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
PVD+VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 180 PVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217
>gi|358443200|gb|AEU11846.1| control protein HCTL036 [Heliconius ismenius]
Length = 217
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 47 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMV 106
GKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE EAVT+IETPPM+
Sbjct: 1 GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60
Query: 107 VGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSI 166
VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYKNW K KKKAFTK +K+++ + G+KSI
Sbjct: 61 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSNKKWQDELGRKSI 120
Query: 167 QAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQI 226
+ +K+ +Y SVVRV+AHTQ++ +K +QKKAH+MEIQVNGG I +KV +A EK I
Sbjct: 121 EKDFKKMIRYCSVVRVIAHTQMKLLKQ-RQKKAHIMEIQVNGGNIEDKVKWAREHLEKPI 179
Query: 227 PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
PVD+VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 180 PVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217
>gi|327287585|ref|XP_003228509.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis]
Length = 399
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/226 (63%), Positives = 189/226 (83%), Gaps = 1/226 (0%)
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKS 145
++ K+E EAVTIIETPP++VVGVVGY++TPRGLRS T++A+H+S+E RRRFYKNW KS
Sbjct: 58 EVSKREEVEAVTIIETPPLVVVGVVGYIETPRGLRSFRTIFAEHISDECRRRFYKNWHKS 117
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
KKKAFTK+ K+++ + GKK ++ +KKY V+RV+ HTQ+ K+ ++QKKAH+MEIQ
Sbjct: 118 KKKAFTKFCKKWQDETGKKQLEKDFAAMKKYCKVIRVIVHTQM-KLLPMRQKKAHVMEIQ 176
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
+NGGT+AEKVD+A+ EKQI V +VF + EMID+IGVTKG G +GV +RW +LPRKT
Sbjct: 177 LNGGTVAEKVDWAHEKMEKQISVQSVFSQSEMIDVIGVTKGHGMKGVTSRWHTKKLPRKT 236
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
H+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 237 HKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTELNKKIYRIGRG 282
>gi|166952267|gb|ABZ04216.1| ribosomal protein rpl3 [Lineus viridis]
Length = 208
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 138/209 (66%), Positives = 176/209 (84%), Gaps = 1/209 (0%)
Query: 23 HRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEK 82
HRKF PRHGSLGFLP+KR+ RHRGKVKAFPKDD +KPC LTAFLGYKAGMTH+VR+ ++
Sbjct: 1 HRKFSAPRHGSLGFLPKKRSKRHRGKVKAFPKDDRTKPCHLTAFLGYKAGMTHLVREADR 60
Query: 83 PGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNW 142
PGSK++KKE EAVTI+ETPPM+VVG VGYV+TP+GLR+ T++A+HL EE RRRFYKNW
Sbjct: 61 PGSKINKKEIVEAVTIVETPPMIVVGCVGYVETPKGLRTFKTIFAEHLGEECRRRFYKNW 120
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
+SKKKAFTKYSK+++ + GKK+I+ IKKY V+RV+AHTQ++ MK +QKKAH+M
Sbjct: 121 YRSKKKAFTKYSKKWQDEAGKKAIECDFRLIKKYCKVIRVIAHTQMKLMKK-RQKKAHIM 179
Query: 203 EIQVNGGTIAEKVDYAYGFFEKQIPVDAV 231
EIQVNGGT+++KV++ EK+I ++ V
Sbjct: 180 EIQVNGGTVSQKVNFVREHMEKKISINTV 208
>gi|226475930|emb|CAX72055.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 217
Score = 296 bits (759), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 174/218 (79%), Gaps = 1/218 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E E VTI+E PPM++VG+VGY T +GLR+ TVWA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WCKSKKKAFTK S+++ + G I L+KIKKY +VVR +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMI 238
+MEIQVNGGTI++KVD+ FEKQIPV VF +DEMI
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMI 217
>gi|401828521|ref|XP_003887974.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
gi|392998982|gb|AFM98993.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
Length = 383
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/304 (51%), Positives = 203/304 (66%), Gaps = 12/304 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 79
MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPSAGAFPADDSSQPVHLTGFMGYKAGMTHVIRTK 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
+ +K +E +AVTI+E PPM+V G+VGY +T GLR L V A ++S+ V RR +
Sbjct: 61 TQVAKNKQLSREVMDAVTILEAPPMVVYGIVGYERTVTGLRRLPIVLASYVSDGVLRRMF 120
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
N K SK + E +S ++ +IKK A VRVL TQ +K L KKA
Sbjct: 121 GNNYVEKGN-----SKGFCASEDSES---RISEIKKRAECVRVLVQTQPGLIKKLGLKKA 172
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+ EIQVNGG+I+EKVD+A EK++ V VF ++E ID+IGVTKGKG++G V R+GV
Sbjct: 173 HIAEIQVNGGSISEKVDWALNMLEKEVHVGDVFGENENIDVIGVTKGKGFQGTVKRFGVR 232
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
+ PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK+VY +G G S +
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNG---SSSIR 289
Query: 320 TEFD 323
TEFD
Sbjct: 290 TEFD 293
>gi|449330139|gb|AGE96402.1| 60S ribosomal protein l3 [Encephalitozoon cuniculi]
Length = 383
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 203/306 (66%), Gaps = 16/306 (5%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 79
MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+ YKAGMTH+VR
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
+ +K +E +AVT++E PPM+V G+VGY KT GLR L V A ++S+ V RR +
Sbjct: 61 TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120
Query: 140 KNWCKSKKKA--FTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQK 197
N SK+ A F K S ++++E IK+ A VRVL TQ +KGL K
Sbjct: 121 GNRYASKESAGQFCKGS----------VCESRVEMIKERAHCVRVLVQTQPTLIKGLGLK 170
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
KAH+ EIQVNGG+I+EKV++A G EK+I + VF +E ID IGVTKGKG++G V R+G
Sbjct: 171 KAHIAEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFG 230
Query: 258 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHT 317
V + PRK+ +G+RKVACIGAWHP+RV +++ARAGQ G+H RTE NK+VY +G G S
Sbjct: 231 VRKQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNG---SSN 287
Query: 318 GITEFD 323
TEFD
Sbjct: 288 IKTEFD 293
>gi|19173079|ref|NP_597630.1| 60S ribosomal protein L3 [Encephalitozoon cuniculi GB-M1]
gi|85014317|ref|XP_955654.1| 60S ribosomal protein L3 [Encephalitozoon cuniculi GB-M1]
gi|51701710|sp|Q8SQI3.1|RL3_ENCCU RecName: Full=60S ribosomal protein L3
gi|19168746|emb|CAD26265.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
gi|19171348|emb|CAD27073.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
Length = 383
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 203/306 (66%), Gaps = 16/306 (5%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 79
MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+ YKAGMTH+VR
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
+ +K +E +AVT++E PPM+V G+VGY KT GLR L V A ++S+ V RR +
Sbjct: 61 TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120
Query: 140 KNWCKSKKKA--FTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQK 197
N SK+ A F K S ++++E IK+ A VRVL TQ +KGL K
Sbjct: 121 GNRYASKESAGQFCKGS----------VCESRVEMIKERAHCVRVLVQTQPTLIKGLGLK 170
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
KAH+ EIQVNGG+I+EKV++A G EK+I + VF +E ID IGVTKGKG++G V R+G
Sbjct: 171 KAHIAEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFG 230
Query: 258 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHT 317
V + PRK+ +G+RKVACIGAWHP+RV +++ARAGQ G+H RTE NK+VY +G G S
Sbjct: 231 VRKQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNG---SSN 287
Query: 318 GITEFD 323
TEFD
Sbjct: 288 IKTEFD 293
>gi|396082145|gb|AFN83757.1| 60S ribosomal protein L3 [Encephalitozoon romaleae SJ-2008]
Length = 383
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/304 (50%), Positives = 204/304 (67%), Gaps = 12/304 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 79
MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFSAPRHGSLQFCPRKRSKTIRPSAGAFPADDSSQPVHLTGFMGYKAGMTHVIRTK 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
++ +K +E +AVT++E PPM+V GVVGY +T GLR L V A ++S+ V RR +
Sbjct: 61 IQAAKNKQLSREVMDAVTVLEAPPMVVYGVVGYERTVTGLRRLPIVLAPYVSDGVLRRMF 120
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
N K + SK++ E ++++ +IKK A VRVL TQ +K L KKA
Sbjct: 121 GN-----KHVERENSKRFCASE---ETESRISEIKKKAECVRVLVQTQPGLIKKLGLKKA 172
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+ EIQVNGG+I+EKV++ EK+I + VF+++E ID+IGVTKGKG++G V R+GV
Sbjct: 173 HIAEIQVNGGSISEKVEWCLDMLEKEIHIGEVFKENENIDVIGVTKGKGFQGTVKRFGVR 232
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
+ PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK+VY +G G
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNGNSSIR--- 289
Query: 320 TEFD 323
TEFD
Sbjct: 290 TEFD 293
>gi|396081112|gb|AFN82731.1| 60S ribosomal protein L3 [Encephalitozoon romaleae SJ-2008]
Length = 383
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 153/304 (50%), Positives = 204/304 (67%), Gaps = 12/304 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 79
MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFSAPRHGSLQFCPRKRSKTIRPSPGAFPADDSSQPVHLTGFMGYKAGMTHVIRTK 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
++ +K +E +AVT++E PPM+V GVVGY +T GLR L V A ++S+ V RR +
Sbjct: 61 IQAAKNKQLSREVMDAVTVLEAPPMVVYGVVGYERTVTGLRRLPIVLAPYVSDGVLRRMF 120
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
N K + SK++ E ++++ +IKK A VRVL TQ +K L KKA
Sbjct: 121 GN-----KHVERENSKRFCASE---ETESRISEIKKKAECVRVLVQTQPGLIKKLGLKKA 172
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+ EIQVNGG+I+EKV++ EK+I + VF+++E ID+IGVTKGKG++G V R+GV
Sbjct: 173 HIAEIQVNGGSISEKVEWCLDMLEKEIHIGEVFKENENIDVIGVTKGKGFQGTVKRFGVR 232
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
+ PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK+VY +G G
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNGNSSIR--- 289
Query: 320 TEFD 323
TEFD
Sbjct: 290 TEFD 293
>gi|78190797|gb|ABB29720.1| ribosomal protein 3 large subunit [Monosiga brevicollis]
Length = 332
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/245 (61%), Positives = 189/245 (77%), Gaps = 1/245 (0%)
Query: 70 KAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQH 129
KAGMTHIVRD+++ GS HKKE EAVT++ETPP++VVGVVGY TPRGLR L TVWA H
Sbjct: 1 KAGMTHIVRDLDRTGSLAHKKEVVEAVTVVETPPIVVVGVVGYTSTPRGLRQLTTVWATH 60
Query: 130 LSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIR 189
++E RR YK++ SKK AF KY + T EG++ L ++ KY SV+RV+ HTQ++
Sbjct: 61 MAEGFIRRCYKHFAASKKAAFRKYFSKRNTPEGQQQFDDDLARMVKYCSVIRVIVHTQMK 120
Query: 190 KMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGY 249
K+ L QKKAH+MEIQ+NGG+I EKVD+A EK++P+ VF ++E IDIIGVTKG G+
Sbjct: 121 KLN-LGQKKAHVMEIQINGGSIQEKVDFAKSLLEKEVPIKDVFSQNEHIDIIGVTKGHGF 179
Query: 250 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
EGV RWG +LPRKTH+GLRKVACIGAWHPA V++ V RAGQ GYHHRTEMNKK+Y++G
Sbjct: 180 EGVTHRWGTKKLPRKTHKGLRKVACIGAWHPANVTYAVPRAGQRGYHHRTEMNKKIYRIG 239
Query: 310 KGGQE 314
G E
Sbjct: 240 AGYHE 244
>gi|284073166|gb|ADB77822.1| 60S ribosomal protein L3 [Phyllodictyon orientale]
Length = 236
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 160/239 (66%), Positives = 193/239 (80%), Gaps = 3/239 (1%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKFEH R GSLGFLP+KR R RG+VK+FPKDDPSKP LTAF+G+KAGMTHIVRDV+
Sbjct: 1 SHRKFEHARCGSLGFLPKKRCRRGRGRVKSFPKDDPSKPPHLTAFMGFKAGMTHIVRDVD 60
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
KPGSK+HKKE CE VTI+E PPM+VVGVVGY T RG R++ WA H+++ +RRRFYKN
Sbjct: 61 KPGSKVHKKEVCEPVTIVECPPMVVVGVVGYATTHRGQRTIGCAWAAHINDTLRRRFYKN 120
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W ++KKKAF K++ +Y D+G K+I AQLE +KK A+V+RVLAHTQ M L KKAHL
Sbjct: 121 WYRAKKKAFKKHATKY--DDGAKTIMAQLEHLKKEATVIRVLAHTQ-PDMVRLGIKKAHL 177
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+EIQVNGGT +KVD+AY FEK+I V +F KDEMID I +TKG+G +GVVTRWGVTR
Sbjct: 178 IEIQVNGGTAPDKVDFAYNLFEKEIRVGTIFGKDEMIDTIAITKGRGTQGVVTRWGVTR 236
>gi|414587237|tpg|DAA37808.1| TPA: hypothetical protein ZEAMMB73_880497, partial [Zea mays]
Length = 162
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 130/151 (86%), Positives = 143/151 (94%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLE 171
NWCKSKKKAFTKY+ +YE D GKK IQ QLE
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLE 151
>gi|303388761|ref|XP_003072614.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
gi|303301755|gb|ADM11254.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
Length = 383
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/304 (50%), Positives = 203/304 (66%), Gaps = 12/304 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 79
MS RKF PRHGSL F PRKR+ R V AFP DD S+P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPSVGAFPADDISQPVHLTGFMGYKAGMTHVIRTK 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
+ +K +E +AVT++E PPM+V G+VGY +T GL L V A ++++ V RR +
Sbjct: 61 TQVAKNKQLSREVMDAVTVVEAPPMVVYGIVGYERTVTGLHRLPIVTASYVNDGVLRRMF 120
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
N K+ A Q+ E ++++E+IKK A VRVL TQ +K L KKA
Sbjct: 121 GNKYMEKEAA-----AQFCRGE---VTESRVEEIKKRAECVRVLVQTQPEMVKTLGLKKA 172
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+ EIQ+NGG+I EKV++A EK+I + VF ++E ID+IGVTKGKG++G V R+GV
Sbjct: 173 HIAEIQLNGGSICEKVEWALERLEKEIQIAEVFGENENIDVIGVTKGKGFQGTVKRFGVR 232
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
+ PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK+VY +G G +
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMIGNGSTKIK--- 289
Query: 320 TEFD 323
TEFD
Sbjct: 290 TEFD 293
>gi|401825791|ref|XP_003886990.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
gi|392998147|gb|AFM98009.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
Length = 383
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/304 (50%), Positives = 201/304 (66%), Gaps = 12/304 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 79
MS RKF PRHGSL F PRKR+ AFP DD S+P LT F+G KAGMTH++R
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSNTITPSAGAFPADDSSQPVHLTGFMGDKAGMTHVIRTK 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
+ +K +E +A+TI+E PPM+V G+VGY +T GLR L V A ++S+ V RR +
Sbjct: 61 TQVAKNKQLSREVMDALTILEAPPMVVYGIVGYERTVTGLRRLPIVLASYVSDGVLRRMF 120
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
N K SK + E +S ++ +IKK A VRVL TQ +K L KKA
Sbjct: 121 GNNYVEKGN-----SKGFCASEDSES---RISEIKKRAECVRVLVQTQPGLIKKLALKKA 172
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+ EIQVNGG+I+EKVD+A EK++ V VF ++E ID+IGVTKGKG++G V R+GV
Sbjct: 173 HIAEIQVNGGSISEKVDWALNMLEKEVHVGDVFGENENIDVIGVTKGKGFQGTVKRFGVR 232
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
+ PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK+VY +G G S +
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNG---SSSIR 289
Query: 320 TEFD 323
TEFD
Sbjct: 290 TEFD 293
>gi|293335791|ref|NP_001168481.1| uncharacterized protein LOC100382258 [Zea mays]
gi|223948579|gb|ACN28373.1| unknown [Zea mays]
gi|413919530|gb|AFW59462.1| hypothetical protein ZEAMMB73_132937 [Zea mays]
Length = 253
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/151 (89%), Positives = 144/151 (95%), Gaps = 1/151 (0%)
Query: 173 IKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVF 232
++KYASV+RV+AHTQIRKMKGLKQKKAHLMEIQVNGGTIA+KVDY Y FFE ++PVDAVF
Sbjct: 18 LRKYASVIRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFE-EVPVDAVF 76
Query: 233 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 292
QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQ
Sbjct: 77 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 136
Query: 293 NGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
NGYHHRTEMNKKVYK+GK GQESH TEFD
Sbjct: 137 NGYHHRTEMNKKVYKIGKAGQESHDASTEFD 167
>gi|300709014|ref|XP_002996676.1| 60S ribosomal protein L3 [Nosema ceranae BRL01]
gi|239605995|gb|EEQ83005.1| hypothetical protein NCER_100207 [Nosema ceranae BRL01]
Length = 384
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 204/305 (66%), Gaps = 14/305 (4%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 79
MS RKF PRHGSL F PRKR+ R ++AFPKDD + P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFNAPRHGSLAFCPRKRSKTIRPPIRAFPKDDCNAPIHLTGFIGYKAGMTHVIRTR 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEV-RRRF 138
+ +K KE +AVTIIETP ++ GV GY +T +GL+ + TV++ H+ + V RRR+
Sbjct: 61 TVQTKNKQSVKEILDAVTIIETPANVIYGVTGYEQTGKGLKRIATVFSSHIDQGVLRRRY 120
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
W + K +D + + ++ ++KK A ++RVL H+Q K+ L KK
Sbjct: 121 GLKWEEISAKL---------SDCSIEDKEQKIAELKKRACIIRVLVHSQPTKIPVLNLKK 171
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
+H EIQVNGG + +KVD+A FEK+I + +F +E +D+IGVTKGKG+ GVV R+GV
Sbjct: 172 SHTAEIQVNGGNVEQKVDWALENFEKEINIRDIFDINENLDVIGVTKGKGFTGVVKRFGV 231
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
T+ PRK+ +G+RKVACIGAWHP+RV TVARAG G+H RTE+NKKVY +G G ++
Sbjct: 232 TKQPRKSRKGIRKVACIGAWHPSRVMTTVARAGGKGFHRRTEINKKVYMIGHGKEKIK-- 289
Query: 319 ITEFD 323
TEFD
Sbjct: 290 -TEFD 293
>gi|303390711|ref|XP_003073586.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
gi|303302733|gb|ADM12226.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
Length = 383
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 151/304 (49%), Positives = 202/304 (66%), Gaps = 12/304 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 79
MS RKF PRHGSL F PRKR+ R V AFP DD S+P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPSVGAFPADDISQPVHLTGFMGYKAGMTHVIRTK 60
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
+ +K +E +AVT++E PPM+V G+VGY +T GL L V ++++ V RR +
Sbjct: 61 TQVAKNKQLSREVMDAVTVVEAPPMVVYGIVGYERTVTGLHRLPIVTVSYVNDGVLRRMF 120
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
N K+ A Q+ E ++++E+IKK A VRVL TQ +K L KKA
Sbjct: 121 GNKYMEKEAA-----AQFCRGE---VTESRVEEIKKRAECVRVLVQTQPEMVKTLGLKKA 172
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H+ EIQ+NGG+I EKV++A EK+I + VF ++E ID+IGVTKGKG++G V R+GV
Sbjct: 173 HIAEIQLNGGSICEKVEWALERLEKEIQIAEVFGENENIDVIGVTKGKGFQGTVKRFGVR 232
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
+ PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK+VY +G G +
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMIGNGSTKIK--- 289
Query: 320 TEFD 323
TEFD
Sbjct: 290 TEFD 293
>gi|296219367|ref|XP_002755828.1| PREDICTED: 60S ribosomal protein L3-like [Callithrix jacchus]
Length = 424
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 145/290 (50%), Positives = 192/290 (66%), Gaps = 28/290 (9%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 46 SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 105
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PG + +P ++ + + P H++EE +
Sbjct: 106 RPG-------LSAWTAGLASPFSELLHLCHSLSGP------GDSEGAHITEE------ET 146
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
KSKKKAFTK K++ +GKK +Q +K + +++L +QKKAH+
Sbjct: 147 GHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKNHVLQMKLLP---------FRQKKAHI 197
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +L
Sbjct: 198 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 257
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 258 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 307
>gi|295646729|gb|ADG23115.1| 60S ribosomal protein L3 [Rhizoplaca chrysoleuca]
Length = 180
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 158/182 (86%), Gaps = 2/182 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKD+P +P LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDNPKEPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+KLHKKE EAVT+IETPPMMVVG+VGY++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEAVTVIETPPMMVVGIVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K++ D G K I +LE+IKKY +VVRVLAH Q+ K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEDSG-KPINRELERIKKYCTVVRVLAHHQVSKT-PLKQKKAH 178
Query: 201 LM 202
LM
Sbjct: 179 LM 180
>gi|183235559|ref|XP_001914254.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|169800490|gb|EDS88972.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 350
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/251 (54%), Positives = 181/251 (72%), Gaps = 3/251 (1%)
Query: 73 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSE 132
MTH++R+V++ +KL K E VTIIETPPM+V G VGY KT GL+ + V+A+H+++
Sbjct: 1 MTHVIREVKRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIAD 60
Query: 133 EVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMK 192
E +RR+ K W K+ K F ++++Y + K + Q+ IK VVRV+AHTQ+ +
Sbjct: 61 EFKRRYTKKWYKNTKNQFAVHTEKYNDVKAKSKRERQIRLIKNRCDVVRVIAHTQM-ALV 119
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
LKQKKA +MEIQ+NGG+IAEKVD+A EKQI V++VF DE ID+ VTKG GY GV
Sbjct: 120 PLKQKKAEVMEIQINGGSIAEKVDFAVSLLEKQISVNSVFGTDECIDVCSVTKGHGYNGV 179
Query: 253 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG 312
+ R+GV LPRKTHRGLRKVAC+GAWHPARVS+TVARAGQ G+ RTE+NKK+Y+LG G
Sbjct: 180 IKRFGVRHLPRKTHRGLRKVACVGAWHPARVSWTVARAGQMGFFKRTEVNKKIYRLGCG- 238
Query: 313 QESHTGITEFD 323
+ TEFD
Sbjct: 239 -DLKNAKTEFD 248
>gi|402471198|gb|EJW05055.1| hypothetical protein EDEG_00836 [Edhazardia aedis USNM 41457]
Length = 408
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 153/321 (47%), Positives = 211/321 (65%), Gaps = 26/321 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MS RK+E PRHGSL + PRKRA + ++AFPKD + C LTA +GYK GM+HI+R
Sbjct: 1 MSCRKYEAPRHGSLAYCPRKRANSVKQSLRAFPKDKGGE-CHLTATIGYKTGMSHIIRTS 59
Query: 81 EK--PGSKLHKKETCE---AVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVR 135
E+ P K K T E AVT IE PP+++ G+VGY KT GL+ + ++A++LS+ V
Sbjct: 60 ERQRPTQKKQKATTHEVFDAVTFIECPPVIIFGIVGYKKTITGLKVHSRLFAKNLSDGVL 119
Query: 136 RRFYK------------NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVL 183
R + + N S K Y ++Y+ DE + I+ +++ +KK S+ RVL
Sbjct: 120 RAYNRRHTLKVNSASNPNTTVSTKNPLDFYVRKYD-DENE--IENEIKNLKKCDSI-RVL 175
Query: 184 AHTQIRKMKGLKQKKAHLMEIQVNGG-TIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIG 242
+Q K++ L KK+H+ME+QVNGG + EKVD+A EK+IP+ VFQ E+IDII
Sbjct: 176 IQSQTEKIRTLNTKKSHVMEVQVNGGKNVCEKVDWALENMEKEIPIKQVFQDQEIIDIIA 235
Query: 243 VTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMN 302
VTKGKG++G R+G LPRKT++GLRKVACIGAWHP+RV +TV RAGQ G+H RTE+N
Sbjct: 236 VTKGKGFQGCTKRFGTRILPRKTNKGLRKVACIGAWHPSRVMWTVPRAGQMGFHRRTEIN 295
Query: 303 KKVYKLGKGGQESHTGITEFD 323
K++YK+G G + + TEFD
Sbjct: 296 KRIYKIGNGTELAK---TEFD 313
>gi|67594775|ref|XP_665877.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656728|gb|EAL35641.1| hypothetical protein Chro.50225 [Cryptosporidium hominis]
Length = 305
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 168/208 (80%), Gaps = 4/208 (1%)
Query: 104 MMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGK 163
M+ VG VGY++TP GLR+L TV+A +LSEE +RRFYKN+ +SK+KAFTKY++ Y ++
Sbjct: 1 MICVGFVGYIETPNGLRALTTVFAGYLSEECKRRFYKNYYRSKRKAFTKYARNYAENQ-- 58
Query: 164 KSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFE 223
++A++ + K+Y +V+R L HTQ+ K GL +KKA +MEIQVNGGT+++K+D+ FE
Sbjct: 59 -RMEAEIARCKQYCTVIRALCHTQVSKT-GLNKKKADIMEIQVNGGTVSDKIDFCVRCFE 116
Query: 224 KQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 283
+ IPV +F ++EMIDIIG++KGKGY+GV++RWGVT+LPRKT RG+RKV+CIGAWHPARV
Sbjct: 117 QPIPVSTIFNENEMIDIIGISKGKGYKGVISRWGVTKLPRKTRRGVRKVSCIGAWHPARV 176
Query: 284 SFTVARAGQNGYHHRTEMNKKVYKLGKG 311
F V RAGQ GY RTE NKK+Y++G+G
Sbjct: 177 QFQVPRAGQKGYGQRTETNKKIYRIGRG 204
>gi|126649185|ref|XP_001388265.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117187|gb|EAZ51287.1| hypothetical protein cgd5_1580 [Cryptosporidium parvum Iowa II]
gi|323508581|dbj|BAJ77184.1| cgd5_1580 [Cryptosporidium parvum]
gi|323509637|dbj|BAJ77711.1| cgd5_1580 [Cryptosporidium parvum]
Length = 305
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 168/208 (80%), Gaps = 4/208 (1%)
Query: 104 MMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGK 163
M+ VG VGY++TP GLR+L TV+A +LSEE +RRFYKN+ +SK+KAFTKY++ Y ++
Sbjct: 1 MICVGFVGYIETPNGLRALTTVFAGYLSEECKRRFYKNYYRSKRKAFTKYARNYAENQ-- 58
Query: 164 KSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFE 223
++A++ + K+Y +V+R L HTQ+ K GL +KKA +MEIQVNGGT+++K+D+ FE
Sbjct: 59 -RMEAEIARCKQYCTVIRALCHTQVSKT-GLNKKKADIMEIQVNGGTVSDKIDFCVRCFE 116
Query: 224 KQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 283
+ IPV +F ++EMIDIIG++KGKGY+GV++RWGVT+LPRKT RG+RKV+CIGAWHPARV
Sbjct: 117 QPIPVSTIFNENEMIDIIGISKGKGYKGVISRWGVTKLPRKTRRGVRKVSCIGAWHPARV 176
Query: 284 SFTVARAGQNGYHHRTEMNKKVYKLGKG 311
F V RAGQ GY RTE NKK+Y++G+G
Sbjct: 177 QFQVPRAGQKGYGQRTETNKKIYRIGRG 204
>gi|427188202|dbj|BAM69086.1| 60S ribosomal protein L3, partial [Peranema trichophorum]
Length = 333
Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 168/216 (77%)
Query: 100 ETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYET 159
ETPPM+VVG+VGY++TPRG R+L T+WA+ L R YKN+ SKKKA+ Y + +
Sbjct: 1 ETPPMIVVGIVGYIRTPRGYRTLKTIWAEQLPVGFIRSLYKNYALSKKKAYKNYLAKKKQ 60
Query: 160 DEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAY 219
++GK+ + + +KKY S++RV+A TQ K+ L+QKK+H MEIQ+NGG+ AEKVD+A
Sbjct: 61 EKGKQQTERDIASLKKYCSIIRVIAITQAHKIPVLRQKKSHNMEIQINGGSTAEKVDFAL 120
Query: 220 GFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 279
E+ +PV+ VFQ+ EM+D+I TKG G+EGV+ RWGVTRLPRKTH+GLRKVACIGAWH
Sbjct: 121 KLLEQPLPVNTVFQESEMVDVIATTKGHGFEGVIHRWGVTRLPRKTHKGLRKVACIGAWH 180
Query: 280 PARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES 315
PARV FTV RAGQNG+HHRTE++KK++K+GK ++
Sbjct: 181 PARVGFTVPRAGQNGFHHRTEIHKKIFKIGKSAEDD 216
>gi|284073152|gb|ADB77815.1| 60S ribosomal protein L3 [Bryopsis sp. EE4]
Length = 217
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/220 (60%), Positives = 166/220 (75%), Gaps = 5/220 (2%)
Query: 44 RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPP 103
R +GK+K+FPKDD S+P LT F+GYKAG THIVR+V++P SKLHKKETCE VTI+E PP
Sbjct: 1 RGKGKIKSFPKDDASQPPHLTGFMGYKAGSTHIVREVDRPNSKLHKKETCETVTIVECPP 60
Query: 104 MMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGK 163
M+VV +GYV T G S TVWAQHL++E++RRFYK W S+++AF Y+K+Y+ +G
Sbjct: 61 MIVVAAIGYVSTANGPVSKYTVWAQHLTDEMKRRFYKRWHTSQRRAFCNYAKKYQ--DGS 118
Query: 164 KSIQAQLEKIKKYASVVRVLAHTQIRKMKGLK--QKKAHLMEIQVNGGTIAEKVDYAYGF 221
I+ L K+K +R+LAHTQI K LK QKK H MEIQVNGGT+ +KVD+AY
Sbjct: 119 TEIEDTLRKMKDECVSIRILAHTQISKTP-LKRFQKKGHCMEIQVNGGTVPDKVDFAYKL 177
Query: 222 FEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
FEK + VD+VFQ +EMID I VTKG G EGVVTRWGVTRL
Sbjct: 178 FEKGVSVDSVFQPNEMIDTIAVTKGCGTEGVVTRWGVTRL 217
>gi|330039014|ref|XP_003239763.1| 60S ribosomal protein L3 [Cryptomonas paramecium]
gi|327206688|gb|AEA38865.1| 60S ribosomal protein L3 [Cryptomonas paramecium]
Length = 331
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/245 (52%), Positives = 175/245 (71%), Gaps = 11/245 (4%)
Query: 73 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSE 132
MTH++++V+KPGSKLHKK+ EA T++ETPP+++ G+VGYV TP+GL++ T+W+ +LS
Sbjct: 1 MTHVIKEVDKPGSKLHKKDVIEAATVVETPPLVIAGIVGYVSTPKGLKAFKTIWSDNLSH 60
Query: 133 EVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEK----IKKYASVVRVLAHTQI 188
+ R +YKNW KSKKKAF+KY KK I EK +KK+ V R + H I
Sbjct: 61 QFLRNYYKNWYKSKKKAFSKYFIV------KKKISTFFEKNVLQMKKFCKVFRFIVHPNI 114
Query: 189 RKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKG 248
+ +K+KKA + EIQVNGG+I +K+ + Q+ V+ VF+ E +D I +TKGKG
Sbjct: 115 CQT-SMKKKKAEICEIQVNGGSIHDKISFCLKLLGNQVTVNTVFKDGEYVDTIAITKGKG 173
Query: 249 YEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
+ GVV RWGVT+LPRKT RG RKVACIG+WHP+RVS++V RAGQ GYHHRT+ N +VYK+
Sbjct: 174 FTGVVQRWGVTKLPRKTRRGARKVACIGSWHPSRVSYSVPRAGQKGYHHRTQSNIQVYKI 233
Query: 309 GKGGQ 313
GK +
Sbjct: 234 GKSSK 238
>gi|444724683|gb|ELW65282.1| 60S ribosomal protein L3 [Tupaia chinensis]
Length = 322
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/291 (49%), Positives = 181/291 (62%), Gaps = 82/291 (28%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLP+KR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIV++V
Sbjct: 1 MSHRKFSVPRHGSLGFLPQKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVQEV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ T+ A+H+S+E +RRFYK
Sbjct: 61 NRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTILAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N +KKY V+ V+ HTQ+R + L QKKAH
Sbjct: 121 NC------------------------------MKKYCQVIHVITHTQMRLLP-LCQKKAH 149
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+ V+ VF + EMID+IG
Sbjct: 150 LMEIQVNGGTVAEKLDWAREQLEQQVSVNQVFGQVEMIDVIG------------------ 191
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
GYHHRTE+N K+YK+G+G
Sbjct: 192 --------------------------------KGYHHRTEIN-KIYKIGQG 209
>gi|84998984|ref|XP_954213.1| 60S ribosomal protein l3 [Theileria annulata]
gi|65305211|emb|CAI73536.1| 60S ribosomal protein l3, putative [Theileria annulata]
Length = 203
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 127/196 (64%), Positives = 161/196 (82%), Gaps = 4/196 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PR GSLGFLP+KR+ HR K+++FPKDD +KP LTAF+GYKAGMTH+V +V
Sbjct: 1 MSHRKFERPRSGSLGFLPKKRSRTHRAKIRSFPKDDITKPPHLTAFIGYKAGMTHVVTEV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSKLHKKE EAVTI+ETPPM+VVG+VGYV+TPRGL+ L TVWA HLS+E+RRRFYK
Sbjct: 61 DRPGSKLHKKEIVEAVTIVETPPMIVVGLVGYVETPRGLKVLGTVWAGHLSDELRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY+K+Y G ++ +L+++K Y++V+R L HTQ K L +KAH
Sbjct: 121 NWYKSKKKAFTKYAKKYVETNG---MELELKRLKNYSTVIRALLHTQPSKT-SLSLRKAH 176
Query: 201 LMEIQVNGGTIAEKVD 216
L+E+Q+NGGTI +KV
Sbjct: 177 LLEVQINGGTIDQKVS 192
>gi|160550199|gb|ABX44804.1| putative 60S ribosomal protein RPL3 [Flustra foliacea]
Length = 185
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 125/186 (67%), Positives = 158/186 (84%), Gaps = 1/186 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG+LGF+P+KR+ RHRGKVK+FP DDP KP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGNLGFIPKKRSKRHRGKVKSFPSDDPRKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PGSK++KKE EAVTIIETPP++VVGV GY++TPRGLR+L T+WA+HLSEE RRRFYK
Sbjct: 61 NRPGSKVNKKEIVEAVTIIETPPLVVVGVTGYIETPRGLRTLGTIWAEHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +KKKAFTKY+K+++ ++GKK I+ K+ K+ +++RVL HTQ+ K+ +QKKA+
Sbjct: 121 NWYHAKKKAFTKYAKKWQDEDGKKVIERDFNKLSKHCTIIRVLCHTQM-KLLNQRQKKAN 179
Query: 201 LMEIQV 206
LMEIQV
Sbjct: 180 LMEIQV 185
>gi|225006193|dbj|BAH28892.1| ribosomal protein L3 [Polypedilum vanderplanki]
Length = 204
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 158/197 (80%), Gaps = 1/197 (0%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGS+ F P+KRA RHRGKVKAFPKDDP+KP LT F+ YKAGMTHIVR+ +
Sbjct: 2 SHRKFSAPRHGSMAFYPKKRAQRHRGKVKAFPKDDPTKPVHLTCFISYKAGMTHIVREAD 61
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ETPP++VVG VGY++TP G R+L VWAQHLSEE RRRFYKN
Sbjct: 62 RPGSKINKKEVVEAVTILETPPIVVVGAVGYIETPHGPRALCNVWAQHLSEECRRRFYKN 121
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W SKKKAFTK SK++ D GKK+I+ +K+ +Y +R++ H+QIR +K QKKAH+
Sbjct: 122 WYSSKKKAFTKASKKWTDDLGKKTIEDNFKKMIRYCKYIRIIVHSQIRLIKQ-GQKKAHI 180
Query: 202 MEIQVNGGTIAEKVDYA 218
MEIQ+NGGTI +KV +
Sbjct: 181 MEIQLNGGTIEDKVQWV 197
>gi|383132709|gb|AFG47248.1| Pinus taeda anonymous locus 2_207_02 genomic sequence
Length = 143
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 122/139 (87%), Positives = 137/139 (98%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 5 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 64
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVT+IETPPM++VGVVGY+KTPRGLR+LNTVWAQHLSEEVRRRFYK
Sbjct: 65 EKPGSKLHKKETCEAVTVIETPPMVIVGVVGYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 124
Query: 141 NWCKSKKKAFTKYSKQYET 159
NW ++KKKAFTKY+K+Y++
Sbjct: 125 NWYRAKKKAFTKYAKKYDS 143
>gi|361067623|gb|AEW08123.1| Pinus taeda anonymous locus 2_207_02 genomic sequence
gi|383132710|gb|AFG47249.1| Pinus taeda anonymous locus 2_207_02 genomic sequence
Length = 143
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/139 (87%), Positives = 137/139 (98%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 5 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 64
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVT+IETPPM++VGVVGY+KTPRGLR+LNTVWAQHLSEEVRRRFYK
Sbjct: 65 EKPGSKLHKKETCEAVTLIETPPMVIVGVVGYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 124
Query: 141 NWCKSKKKAFTKYSKQYET 159
NW ++KKKAFTKY+K+Y++
Sbjct: 125 NWYRAKKKAFTKYAKKYDS 143
>gi|149065895|gb|EDM15768.1| ribosomal protein L3, isoform CRA_a [Rattus norvegicus]
Length = 238
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/178 (69%), Positives = 154/178 (86%), Gaps = 1/178 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
NW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AHTQ+R + L+QKK
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMR-LLPLRQKK 177
>gi|68065494|ref|XP_674730.1| ribosomal protein L3 [Plasmodium berghei strain ANKA]
gi|56493491|emb|CAH94107.1| ribosomal protein L3, putative [Plasmodium berghei]
Length = 225
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 168/231 (72%), Gaps = 6/231 (2%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKD+ TAF+GYK+GM+HIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDNKELAPHFTAFMGYKSGMSHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EA TI+E PM+VVG+VGY +TP+GL+ L VWA H+S+E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLKVLTAVWANHVSDEFRRRYYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KS KKAFTK +T + K +I+KY +++R + HTQ K L+ KKAH
Sbjct: 121 NWYKSDKKAFTKCLNIPDTTKEK-----LYNRIEKYCTILRAICHTQPSKTP-LRLKKAH 174
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEG 251
+MEIQ+NGG + +K+++ EK IPV VF +EMID+I VTKG G +G
Sbjct: 175 IMEIQINGGHMKDKINFVKELLEKNIPVTNVFNTNEMIDVISVTKGHGTKG 225
>gi|156376964|ref|XP_001630628.1| predicted protein [Nematostella vectensis]
gi|156217652|gb|EDO38565.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 124/171 (72%), Positives = 145/171 (84%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR RHRGKVK+FPKDD + P LTAF+G+KAGMTHI+R+V
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRCKRHRGKVKSFPKDDNTLPPHLTAFIGFKAGMTHILREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKL+KKE EAVTIIETPPMMVVGVVGY++TPRG+R L T+WA+HLSEE +RRFYK
Sbjct: 61 EKPGSKLNKKEKVEAVTIIETPPMMVVGVVGYIETPRGMRVLKTIWAEHLSEECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKM 191
NWC SKKKAFTK SK++ D+GKKSI+ +KKY V+RV+ HTQ K+
Sbjct: 121 NWCNSKKKAFTKASKRWADDDGKKSIEEDFNTMKKYCKVIRVICHTQNAKL 171
>gi|5762260|dbj|BAA83471.1| Csf-3 [Cucumis sativus]
Length = 219
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/133 (93%), Positives = 130/133 (97%)
Query: 191 MKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYE 250
MKGLKQKKAHLMEIQVNGG+IA+K DYAYGFFEKQ+PV+AVFQKDEMID+IGVTKGKGYE
Sbjct: 1 MKGLKQKKAHLMEIQVNGGSIAQKXDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYE 60
Query: 251 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK+GK
Sbjct: 61 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGK 120
Query: 311 GGQESHTGITEFD 323
GQESHT ITEFD
Sbjct: 121 TGQESHTAITEFD 133
>gi|48257062|gb|AAH04323.2| RPL3 protein, partial [Homo sapiens]
Length = 292
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
Query: 132 EEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKM 191
+E +RRFYKNW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+R +
Sbjct: 1 DECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLL 60
Query: 192 KGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEG 251
L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+G
Sbjct: 61 P-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKG 119
Query: 252 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
V +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 120 VTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 179
>gi|148672668|gb|EDL04615.1| mCG11520, isoform CRA_a [Mus musculus]
Length = 238
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/178 (69%), Positives = 153/178 (85%), Gaps = 1/178 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
NW KSKKKAFTKY K+++ D GKK ++ +KKY V+R++AHTQ+R + L+QKK
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMR-LLPLRQKK 177
>gi|224095129|ref|XP_002195484.1| PREDICTED: 60S ribosomal protein L3-like [Taeniopygia guttata]
Length = 177
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 119/168 (70%), Positives = 148/168 (88%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTIIETPPM++VG+VGYV+TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIIETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQI 188
NW KSKKKAFTKY K+++ ++GKK ++ +KKY V+RV+AHTQ+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFNSMKKYCQVIRVMAHTQV 168
>gi|71416007|ref|XP_810050.1| ribosomal protein L13 [Trypanosoma cruzi strain CL Brener]
gi|70874525|gb|EAN88199.1| ribosomal protein L13, putative [Trypanosoma cruzi]
Length = 221
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 167/221 (75%), Gaps = 2/221 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM+VVG+VGY +TP G +++ TVWA H S E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG--LKQKK 198
NW +S + AFTK + T EG+ + L+ K A ++RV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMID 239
AH+ EIQ+NGGTIAEK++ A EK++ +D++FQ+ E D
Sbjct: 181 AHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCD 221
>gi|414587233|tpg|DAA37804.1| TPA: hypothetical protein ZEAMMB73_880497 [Zea mays]
Length = 137
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/133 (90%), Positives = 127/133 (95%)
Query: 191 MKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYE 250
MKGLKQKKAHLMEIQVNGGTIA+KVDY Y FFEK++PVDAVFQKDEMIDIIGVTKGKGYE
Sbjct: 1 MKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYE 60
Query: 251 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK
Sbjct: 61 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK 120
Query: 311 GGQESHTGITEFD 323
GQE+H TEFD
Sbjct: 121 AGQETHDASTEFD 133
>gi|392349059|ref|XP_003750279.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
[Rattus norvegicus]
Length = 358
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/291 (47%), Positives = 179/291 (61%), Gaps = 46/291 (15%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MS+R F PRHGSLGF P+K + H GKVK FPKDD SKP LT FL +KA MTHI++ V
Sbjct: 1 MSYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++P SK++KKE E V I+ETPPM+V+G+VGY++ PRGL + V+A+H+S + ++ FYK
Sbjct: 61 DRPESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW + +EG H +R+MK KAH
Sbjct: 121 NW--------------HLXEEG---------------------LHQILREMK-----KAH 140
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQV G E + V+ VF DE+ID+I TKG GY+GV +
Sbjct: 141 LMEIQVMGHCGXE------ARLSWREAVNQVFGXDEIIDVIKETKGNGYKGVTRVXHTKK 194
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LP KTHRGL KVAC+GAWHPARV+F+VA+ GQ GYHH TE NKK+ K+G+G
Sbjct: 195 LPXKTHRGLPKVACVGAWHPARVTFSVAQVGQKGYHHXTEXNKKICKIGQG 245
>gi|226480234|emb|CAX78781.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 215
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/194 (64%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E E VTI+E PPM++VG+VGY T +GLR+ TVWA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+WCKSKKKAFTK S+++ + G I L+KIKKY +VVR +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 201 LMEIQVNGGTIAEK 214
+MEIQVN G +K
Sbjct: 180 IMEIQVNVGLFHKK 193
>gi|392341252|ref|XP_003754289.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
[Rattus norvegicus]
Length = 358
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/291 (47%), Positives = 178/291 (61%), Gaps = 46/291 (15%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MS+R F PRHGSLGF P+K + H GKVK FPKDD SKP LT FL +KA MTHI++ V
Sbjct: 1 MSYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++P SK++KKE E V I+ETPPM+V+G+VGY++ PRGL + V+A+H+ + ++ FYK
Sbjct: 61 DRPESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHIGGKSKKCFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW + +EG H +R+MK KAH
Sbjct: 121 NW--------------HIXEEG---------------------LHQILREMK-----KAH 140
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQV G E + V+ VF DE+ID+I TKG GY+GV +
Sbjct: 141 LMEIQVMGHCGXE------ARLSWREAVNQVFGXDEIIDVIKETKGNGYKGVTRVXHTKK 194
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LP KTHRGL KVAC+GAWHPARV+F+VA+ GQ GYHH TE NKK+ K+G+G
Sbjct: 195 LPXKTHRGLPKVACVGAWHPARVTFSVAQVGQKGYHHXTEXNKKICKIGQG 245
>gi|13517923|gb|AAK29057.1|AF346004_1 L3 ribosomal protein, partial [Lolium perenne]
Length = 220
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 118/134 (88%), Positives = 126/134 (94%)
Query: 190 KMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGY 249
KM GLKQKKAHLMEIQ+NGGTIA+KVDY Y FFEK++P+DAVFQKDEMIDIIGVTKGKGY
Sbjct: 1 KMNGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGY 60
Query: 250 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
EGVVTRWGVTRLPRKTHRGL KVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+G
Sbjct: 61 EGVVTRWGVTRLPRKTHRGLPKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG 120
Query: 310 KGGQESHTGITEFD 323
K GQE+H TEFD
Sbjct: 121 KVGQETHDASTEFD 134
>gi|188572405|gb|ACD65109.1| putative 60S ribosomal protein RPL3 [Novocrania anomala]
Length = 191
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/192 (66%), Positives = 166/192 (86%), Gaps = 1/192 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLP+KR+ RHRGK+KAFPKDDPSKP +TAF+GYKAGM+HIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPKKRSKRHRGKIKAFPKDDPSKPVHMTAFIGYKAGMSHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK +KKE EAVTI+E+PP++VVGVVGY++TPRGLR T++A+HLSEE RRRFYK
Sbjct: 61 DRPGSKTNKKEVVEAVTIVESPPVIVVGVVGYIETPRGLRPFKTIFAEHLSEECRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW K+KKKAFTKY+K+++ ++GKK I+ +++KY V+RV+ HTQI+ +K +QKKAH
Sbjct: 121 NWYKAKKKAFTKYAKKWQDEDGKKDIEKDFAQMRKYCKVIRVVVHTQIKVLKK-RQKKAH 179
Query: 201 LMEIQVNGGTIA 212
++EI +NGGTIA
Sbjct: 180 ILEIPLNGGTIA 191
>gi|6683575|dbj|BAA89259.1| ribosomal protein L3 [Bombyx mori]
Length = 171
Score = 253 bits (646), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 117/169 (69%), Positives = 146/169 (86%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTIIETPPM+ VGVVGY++TP GLR+L TVWA+H+SE+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIR 189
NW K KKKAFTK SK+++ + G+KSI+ +K+ +Y SVVRV+AHTQ++
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMK 169
>gi|326574320|gb|ADZ95675.1| 60S ribosomal protein L3 [Nosema bombycis]
Length = 664
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/302 (47%), Positives = 184/302 (60%), Gaps = 43/302 (14%)
Query: 24 RKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD-VEK 82
RKF PRHGSL F PRKR+ + ++AFPKD + LTAF+GYKAGMTH++R + +
Sbjct: 176 RKFNAPRHGSLAFGPRKRSKTIKPSIRAFPKDVQEEKIHLTAFIGYKAGMTHVIRSKIIQ 235
Query: 83 PGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRR-FYKN 141
+K KE +AVT+IETPPM++ GV GY T +GL + TV A H+ E VRRR F K
Sbjct: 236 TKNKQLSKEIMDAVTLIETPPMVIYGVTGYEVTGKGLNRIATVLAPHIDESVRRREFGKR 295
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W + + K+Y ++ +K LE+I+K ASV+R+LAHTQ K+ L KK+H+
Sbjct: 296 W-----EQLSANIKEYNKEKAEK----DLEEIRKRASVIRILAHTQPTKIPALHLKKSHI 346
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
EIQVNGGTI EKVD+A FEK++ +D VF+ +E +D IG
Sbjct: 347 SEIQVNGGTINEKVDWALDKFEKEVTIDEVFEVNENLDTIG------------------- 387
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITE 321
VACIGAWHP+RV TVARAGQ G+H RTE NKKVY +G G + TE
Sbjct: 388 ----------VACIGAWHPSRVMTTVARAGQMGFHRRTETNKKVYMIGNGNELIK---TE 434
Query: 322 FD 323
FD
Sbjct: 435 FD 436
>gi|324520529|gb|ADY47657.1| 60S ribosomal protein L3 [Ascaris suum]
Length = 193
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 111/164 (67%), Positives = 142/164 (86%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
KF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+G+KAGMTHIVR+V+KPG
Sbjct: 10 KFSAPRHGSMGFTPKKRSRRHRGKVKAFPKDDPTKPIHLTAFIGFKAGMTHIVREVDKPG 69
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
SK++KKE EAVTI+ETPPM++VG+VGY+ TPRG R TVWA+HLSE+ RRRFYKNW
Sbjct: 70 SKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYKNWHT 129
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQI 188
SKKKAF K++K+++ ++G+KSI++ L K+KKY S +RV+AHTQ+
Sbjct: 130 SKKKAFQKHAKKWQDEDGRKSIESDLNKMKKYCSKIRVIAHTQV 173
>gi|402869396|ref|XP_003898748.1| PREDICTED: 60S ribosomal protein L3-like [Papio anubis]
Length = 327
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 150/193 (77%), Gaps = 3/193 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSKKKAFTKY K+++ ++GKK ++ +KK HT +R + +
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKSKINTN---HTNVRTRTQIASTRKP 177
Query: 201 LMEIQVNGGTIAE 213
+I + G +++
Sbjct: 178 THQILLKAGVLSK 190
>gi|429963937|gb|ELA45935.1| hypothetical protein VCUG_02577 [Vavraia culicis 'floridensis']
Length = 385
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 142/308 (46%), Positives = 189/308 (61%), Gaps = 11/308 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MS RK+E PRHGSL + P++RA + R A P+D P+ LT+FL YKAGMTHI+R
Sbjct: 1 MSCRKYEAPRHGSLAYCPKRRAKQIRQPSPAPPRDCPTDKPHLTSFLAYKAGMTHILRIT 60
Query: 81 EKPG----SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRR 136
+ ++ +KE +AV+I+E P M V G+ Y K RGL +++SE +
Sbjct: 61 TRKSNDKKAREIRKEVVDAVSILEAPEMRVYGIRLYAKGVRGLVLKEEYVTKNMSECLLA 120
Query: 137 RFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVV-RVLAHTQIRKMKGLK 195
R + + +S K + + +E I AQ EK + VV +VL HT+I +K L
Sbjct: 121 RMVRRYHRSGLKK--NFKTKENAEENVNEIGAQFEKYYGTSGVVVKVLVHTKINMIK-LD 177
Query: 196 QKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 255
KKAH++E+QVNGGT+ +KV YA F K + + VF + E+I I GVTKGKG+ GVV R
Sbjct: 178 SKKAHVLEVQVNGGTVEDKVQYALSIFNKDVKIGEVFDEQELISICGVTKGKGFTGVVKR 237
Query: 256 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES 315
+GV LPRK+++G+RKVACIGAWHPA V TVARAGQ G RT MNKKV K+G Q
Sbjct: 238 FGVRILPRKSNKGIRKVACIGAWHPAGVLRTVARAGQMGSFKRTLMNKKVLKIGNAMQSV 297
Query: 316 HTGITEFD 323
TEFD
Sbjct: 298 Q---TEFD 302
>gi|326495464|dbj|BAJ85828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 213
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/127 (88%), Positives = 121/127 (95%)
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
KKAHLMEIQ+NGGTIA+KVDY Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRW
Sbjct: 1 KKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 60
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
GVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H
Sbjct: 61 GVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETH 120
Query: 317 TGITEFD 323
TEFD
Sbjct: 121 DASTEFD 127
>gi|379072556|gb|AFC92910.1| ribosomal protein L3, partial [Hymenochirus curtipes]
Length = 256
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 141/166 (84%), Gaps = 1/166 (0%)
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
KKKAFTKY K+++ +EGKK ++ + +KKY V+RV+AHTQ+R + L+QKK+HLMEIQ
Sbjct: 1 KKKAFTKYCKKWQDEEGKKQLEKDIASMKKYCQVIRVIAHTQMRLLP-LRQKKSHLMEIQ 59
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
VNGGTIAEKVD+A E+Q+ + VF +DEMID+IGVTKGKGY+GV +RW +LPRKT
Sbjct: 60 VNGGTIAEKVDWAREKLEQQVAIAGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKT 119
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
HRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 120 HRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 165
>gi|379072554|gb|AFC92909.1| ribosomal protein L3, partial [Rhinophrynus dorsalis]
Length = 256
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 139/166 (83%), Gaps = 1/166 (0%)
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
KKKAFTKY K+++ DEGKK ++ +KKY V+RV+AHTQ+R + L+QKK+HLMEIQ
Sbjct: 1 KKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LRQKKSHLMEIQ 59
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
VNGGT+AEKVD+A E+Q+ V VF +DEMID+IGVTKGKG +GV +RW +LPRKT
Sbjct: 60 VNGGTVAEKVDWAREKLEQQVAVSGVFGQDEMIDVIGVTKGKGNKGVTSRWHTKKLPRKT 119
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
HRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 120 HRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 165
>gi|70909599|emb|CAJ17225.1| ribosomal protein L3e [Mycetophagus quadripustulatus]
Length = 283
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/167 (68%), Positives = 139/167 (83%), Gaps = 1/167 (0%)
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
SKKKAFTK SK++ D GKKSI+ +KI KY VVRV+AHTQ++ +K +QKKAH+MEI
Sbjct: 1 SKKKAFTKSSKKWSDDLGKKSIERDFKKIVKYCKVVRVIAHTQMKLLKQ-RQKKAHIMEI 59
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
Q+NGG+IA+KV +A EK IP++ VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 60 QLNGGSIADKVQWAREHLEKPIPINQVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 119
Query: 265 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
TH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y++G G
Sbjct: 120 THKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAG 166
>gi|61740425|gb|AAX54475.1| ribosomal protein L3 [Lolium multiflorum]
Length = 132
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/127 (86%), Positives = 117/127 (92%)
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
KKAHLMEIQVNGGTIA+KVDY Y FFEK++P+DAVFQKDEMIDIIGVTKGKGY TRW
Sbjct: 1 KKAHLMEIQVNGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYRRCRTRW 60
Query: 257 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
GVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H
Sbjct: 61 GVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETH 120
Query: 317 TGITEFD 323
TEFD
Sbjct: 121 DASTEFD 127
>gi|355749943|gb|EHH54281.1| hypothetical protein EGM_15087 [Macaca fascicularis]
Length = 201
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/198 (58%), Positives = 155/198 (78%), Gaps = 2/198 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M+HRKF PRHGSL FL +K +++H GKVK+FPKDDPSK LTAFLGYKAGMT IV++V
Sbjct: 1 MAHRKFSAPRHGSLSFLTQKHSSKHHGKVKSFPKDDPSKLVHLTAFLGYKAGMTKIVQEV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+V+G+VGYV+TP GL++ V A+H+S+ +R FYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVMGIVGYVQTPPGLQTFKIVLAEHISDASKRHFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KS +KAFTKY K+ + ++GKK ++ +KKY V+R +A+TQ+ + L Q KAH
Sbjct: 121 NWHKS-EKAFTKYCKKCQDEDGKKHLEKDFGSMKKYRQVIRGIAYTQMCLLP-LCQNKAH 178
Query: 201 LMEIQVNGGTIAEKVDYA 218
LMEIQV GT+A K+D+A
Sbjct: 179 LMEIQVKVGTMARKLDWA 196
>gi|379072552|gb|AFC92908.1| ribosomal protein L3, partial [Pipa carvalhoi]
Length = 255
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 139/166 (83%), Gaps = 2/166 (1%)
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
KKKAFTKY K+ + +EGKK ++ +KKY V+RV+AHTQ+R + L+QKK+HLMEIQ
Sbjct: 1 KKKAFTKYCKK-QDEEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LRQKKSHLMEIQ 58
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
VNGGT+AEKVD+A E+Q+ + VF +DEMID+IGVTKGKGY+GV +RW +LPRKT
Sbjct: 59 VNGGTVAEKVDWAREKLEQQVLIGGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKT 118
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
HRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 119 HRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 164
>gi|440493542|gb|ELQ75998.1| 60S ribosomal protein L3 [Trachipleistophora hominis]
Length = 384
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/308 (44%), Positives = 190/308 (61%), Gaps = 12/308 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MS RK+E PRHGSL + P+KRA + R A P D+P+ LT+FL YKAGMTHI+R
Sbjct: 1 MSCRKYEAPRHGSLAYCPKKRAKQIRQPAAAAPPDNPADKPHLTSFLAYKAGMTHILRIT 60
Query: 81 EKPG----SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRR 136
+ ++ +KE +AV+++E P M V G+ Y + RGL + ++ SE +
Sbjct: 61 TRKSNDKKAREIRKEVVDAVSVLEAPAMRVYGIRVYTRGVRGLVLADEYVTKNKSECLLA 120
Query: 137 RFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASV-VRVLAHTQIRKMKGLK 195
R + + +S A K + + E ++A+ EK ++V V+VL HT+I +K L
Sbjct: 121 RMVRRYHRS---ALKKNAGRENVQEDLNDVRARFEKYCATSNVLVKVLMHTKIETLK-LD 176
Query: 196 QKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 255
KKAH++E+QVNGG++A+KV YA I + VF + E+I I GVTKGKG+ GVV R
Sbjct: 177 SKKAHVLEVQVNGGSVADKVQYALSVLNTDISIGEVFNEQELISICGVTKGKGFTGVVKR 236
Query: 256 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES 315
+GV LPRK+++G+RKVACIGAWHPA V TVARAGQ G RT +NKKV K+G Q
Sbjct: 237 FGVRILPRKSNKGIRKVACIGAWHPAGVLRTVARAGQMGCFKRTLINKKVLKIGNATQSV 296
Query: 316 HTGITEFD 323
TEFD
Sbjct: 297 Q---TEFD 301
>gi|326437340|gb|EGD82910.1| ribosomal protein L3 isoform a [Salpingoeca sp. ATCC 50818]
Length = 235
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLP+KR HRG+V++FP+D+ LTAF+GYKAGMTHIVR++
Sbjct: 1 MSHRKFRAPRHGSLGFLPKKRTKHHRGRVRSFPRDNKEDKPHLTAFIGYKAGMTHIVREM 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ GSK HKKE EAVT++ETPPM+ VG+VGYV+TPRGLR L TV+A ++SE RRFYK
Sbjct: 61 DRTGSKAHKKEVVEAVTVVETPPMVGVGIVGYVETPRGLRQLTTVFAGNMSETCMRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N+ KSKKK F+KY + +T+EGKK+ + QL ++ KY +V+RV+AHT+I + L+QK+AH
Sbjct: 121 NYVKSKKKQFSKYFARLKTEEGKKNFEDQLRRLAKYCTVIRVIAHTKIDVL-NLRQKRAH 179
Query: 201 LMEIQVNGGTIAEKVD 216
+MEIQVNGGT + D
Sbjct: 180 IMEIQVNGGTPRGETD 195
>gi|269859601|ref|XP_002649525.1| 60S ribosomal protein L3 [Enterocytozoon bieneusi H348]
gi|220067076|gb|EED44544.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
Length = 329
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/252 (47%), Positives = 172/252 (68%), Gaps = 12/252 (4%)
Query: 73 MTHIVRDVE-KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLS 131
MTH++R E + +K+ KE +AVTIIETPP++V GVVGY T +GL + A++LS
Sbjct: 1 MTHVIRTKEVRAKNKIQTKEILDAVTIIETPPIVVHGVVGYKNTVKGLERTCIILARNLS 60
Query: 132 EEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKM 191
E+V RR +K KA+ K + + + + + +++K + ++R++ ++Q+R +
Sbjct: 61 EDVIRRMFK-------KAYIPGIKYEDLRKNVEYTEDDVNELRK-SEIIRLICNSQVRAI 112
Query: 192 KGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEG 251
K +KQKK+H+MEIQV GG+I +KV Y EK+I V+ VF K E +D IGVTKGKG++G
Sbjct: 113 KSIKQKKSHIMEIQVGGGSIDDKVSYGISHLEKEIKVNNVFSKSEFLDTIGVTKGKGFQG 172
Query: 252 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
VV RWG T LPRKT++G+RKVACIGA+HP+RV ++VARAGQ G+H RT+ N VY +G G
Sbjct: 173 VVKRWGTTILPRKTNKGIRKVACIGAFHPSRVMYSVARAGQVGFHRRTQQNLLVYDIGNG 232
Query: 312 GQESHTGITEFD 323
Q T+FD
Sbjct: 233 KQPIQ---TDFD 241
>gi|294866225|ref|XP_002764639.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239864270|gb|EEQ97356.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 182
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 136/181 (75%), Gaps = 9/181 (4%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR H+GKVK+FPKDD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKSFPKDDQSKPCHLTAFMGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLH+KE EAVT++E PPM+ VG VGYV+TP GLR+L TVWA+HLS+EVRRRFYK
Sbjct: 61 DKPGSKLHRKEVVEAVTVLEAPPMVCVGFVGYVETPNGLRALTTVWAKHLSDEVRRRFYK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW SKKK ++++ + ++ A VVR + HTQ+ K+K L QK
Sbjct: 121 NWYHSKKK--------LSASTKRRTMTLRSSGVRSTARVVRAIMHTQVSKVK-LTQKTPT 171
Query: 201 L 201
L
Sbjct: 172 L 172
>gi|226480246|emb|CAX78787.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480248|emb|CAX78788.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 328
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 138 FYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQK 197
F K KKKAFTK S+++ + G I L+KIKKY +VVR +AHTQ+R MK +QK
Sbjct: 27 FIKIGANPKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQK 85
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
KAH+MEIQVNGGTI++KVD+ FEKQIPV VF +DEMID+IGVTKGKG++GV +RW
Sbjct: 86 KAHIMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWH 145
Query: 258 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
+LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKK+Y++G G Q
Sbjct: 146 TKKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQ 201
>gi|226475922|emb|CAX72051.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 328
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 138 FYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQK 197
F K KKKAFTK S+++ + G I L+KIKKY +VVR +AHTQ+R MK +QK
Sbjct: 27 FIKIGANPKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQK 85
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
KAH+MEIQVNGGTI++KVD+ FEKQIPV VF +DEMID+IGVTKGKG++GV +RW
Sbjct: 86 KAHIMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWH 145
Query: 258 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
+LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKK+Y++G G Q
Sbjct: 146 TKKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQ 201
>gi|301791988|ref|XP_002930962.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like,
partial [Ailuropoda melanoleuca]
Length = 355
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/293 (43%), Positives = 176/293 (60%), Gaps = 61/293 (20%)
Query: 20 RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD 79
R+SHRKF PRHGSLGFLP+K ++ H G+ +FPKDD SKP LTAFLGYKAGMTHIV +
Sbjct: 4 RISHRKFSIPRHGSLGFLPQKCSSWHHGRXTSFPKDDSSKPIHLTAFLGYKAGMTHIVXE 63
Query: 80 VEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFY 139
V +PGSK+ KKE E VTI+E P MVVG +GY +T +GL +L T++A+H+ ++ +R FY
Sbjct: 64 VSRPGSKVKKKEIVEDVTIVEAPS-MVVGTMGYEETIQGLCTLKTIFAEHIHDKCKRHFY 122
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVV--RVLAHTQIRKMKGLKQK 197
KNW KS KKAF KY K ++ ++GK+ ++ + +Y ++ ++ + K KG K+
Sbjct: 123 KNWGKS-KKAFNKYCK-WQDNDGKQQLEKDFNSM-RYGQIIHDEMIHVISVTKGKGYKEV 179
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
+H + K++P
Sbjct: 180 TSH--------------------WHTKKLPC----------------------------- 190
Query: 258 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
KTH+GL KV CIGAWHPA+V+F++A AGQ GYHH TE+NKK+YK+G+
Sbjct: 191 ------KTHQGLCKVGCIGAWHPAQVAFSMAWAGQKGYHHCTEINKKIYKIGQ 237
>gi|71984550|ref|NP_001021256.1| Protein RPL-3, isoform d [Caenorhabditis elegans]
gi|51011805|emb|CAH10798.1| Protein RPL-3, isoform d [Caenorhabditis elegans]
Length = 303
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 143/179 (79%), Gaps = 4/179 (2%)
Query: 148 KAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVN 207
KAFTKY+K+++ ++GKK I+A K+KKY S +RV+AHTQ++ ++ +QKKAHL+EIQVN
Sbjct: 30 KAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAHLVEIQVN 88
Query: 208 GGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 267
GGTI +KVD+A EKQ+ VD VF +DEMID IGVT+G G++GV +RW +LPRKTH+
Sbjct: 89 GGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHK 148
Query: 268 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHTGITEFD 323
GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N K+Y++GK + + G TEFD
Sbjct: 149 GLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFD 207
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPK 54
MSHRKF PRHG +GF P+KR+ +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>gi|226480230|emb|CAX78779.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 329
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/168 (66%), Positives = 137/168 (81%), Gaps = 1/168 (0%)
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
KKKAFTK S+++ + G I L+KIKKY +VVR +AHTQ+R MK +QKKAH+MEIQ
Sbjct: 36 KKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAHIMEIQ 94
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
VNGGTI++KVD+ FEKQIPV VF +DEMID+IGVTKGKG++GV +RW +LPRKT
Sbjct: 95 VNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKT 154
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
H+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKK+Y++G G Q
Sbjct: 155 HKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQ 202
>gi|209732596|gb|ACI67167.1| 60S ribosomal protein L3 [Salmo salar]
Length = 251
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/174 (66%), Positives = 143/174 (82%), Gaps = 6/174 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGYV+TPRGLRS T++A+H+S+E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGL 194
NW KSKKKAFTKY K+++ DEGKK + +K A+ L++ I ++G
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQL------VKNNAATEYDLSNKSITPLRGF 168
>gi|306922439|gb|ADN07433.1| RE73632p [Drosophila melanogaster]
Length = 208
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 135/168 (80%), Gaps = 1/168 (0%)
Query: 144 KSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLME 203
KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH+ME
Sbjct: 24 KSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAHVME 82
Query: 204 IQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
IQ+NGG+I +KV +A EK I V VF +DEMID +GVTKGKG++GV +RW +LPR
Sbjct: 83 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 142
Query: 264 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
KTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 143 KTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 190
>gi|256000845|gb|ACU51763.1| RE52161p [Drosophila melanogaster]
Length = 316
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 135/168 (80%), Gaps = 1/168 (0%)
Query: 144 KSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLME 203
KSKKKAFTK SK++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH+ME
Sbjct: 24 KSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAHVME 82
Query: 204 IQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
IQ+NGG+I +KV +A EK I V VF +DEMID +GVTKGKG++GV +RW +LPR
Sbjct: 83 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 142
Query: 264 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
KTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 143 KTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 190
>gi|339247731|ref|XP_003375499.1| putative ribosomal protein L3 [Trichinella spiralis]
gi|316971139|gb|EFV54965.1| putative ribosomal protein L3 [Trichinella spiralis]
Length = 180
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 137/169 (81%), Gaps = 7/169 (4%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
+SHRKF PRHG +GFLP+KR+ RHRGKVK+FPKDDP KP LTAF+GYKAGMTHIVR+V
Sbjct: 17 VSHRKFSAPRHGHVGFLPKKRSKRHRGKVKSFPKDDPQKPVHLTAFIGYKAGMTHIVREV 76
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVG--VVGYVKTPRGLRSLNTVWAQHLSEEVRRRF 138
+KPGSK++KK+ EAVT++ETPPM++VG VVGY++TP+GLR+ T+WA+HLS++ +RR+
Sbjct: 77 DKPGSKINKKDVVEAVTVLETPPMVIVGKCVVGYIETPQGLRAFKTIWAEHLSDDCKRRY 136
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQ 187
K ++KAFTK SK+++ + G K IQ ++ KY V+RV+AHTQ
Sbjct: 137 -----KCERKAFTKASKKWQDEAGVKEIQTDFARMIKYCKVIRVIAHTQ 180
>gi|56462226|gb|AAV91396.1| ribosomal protein 24 [Lonomia obliqua]
Length = 280
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 131/158 (82%), Gaps = 1/158 (0%)
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
SK+++ + G+KSI+ +K+ +Y SV+R++AHTQ++ +K +QKKAH+MEIQ+NGG I +
Sbjct: 1 SKKWQDELGRKSIEKDFKKMIRYCSVIRIIAHTQMKLLK-QRQKKAHIMEIQINGGKIED 59
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
KV++A E Q P+ VF +DEMID IGVTKGKGY+GV +RW +LPRKTH+GLRKVA
Sbjct: 60 KVNWAREHLENQFPLTRVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVA 119
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
CIGAWHP+RVSFTVARAGQ GYHHRTEMNKK+Y+LG+G
Sbjct: 120 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRLGQG 157
>gi|71296875|gb|AAH36582.1| RPL3 protein [Homo sapiens]
gi|119580715|gb|EAW60311.1| ribosomal protein L3, isoform CRA_b [Homo sapiens]
gi|119580721|gb|EAW60317.1| ribosomal protein L3, isoform CRA_b [Homo sapiens]
Length = 251
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 123/139 (88%), Gaps = 1/139 (0%)
Query: 173 IKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVF 232
+KKY V+RV+AHTQ+R + L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+ VF
Sbjct: 1 MKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVF 59
Query: 233 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 292
+DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ
Sbjct: 60 GQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQ 119
Query: 293 NGYHHRTEMNKKVYKLGKG 311
GYHHRTE+NKK+YK+G+G
Sbjct: 120 KGYHHRTEINKKIYKIGQG 138
>gi|226480220|emb|CAX78774.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 327
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 129/160 (80%), Gaps = 1/160 (0%)
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
S+++ + G I L+KIKKY +VVR +AHTQ+R MK +QKK H+MEIQVNGGTI++
Sbjct: 42 SRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKTHIMEIQVNGGTISQ 100
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
KVD+ FEKQIPV VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 101 KVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 160
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
CIGAWHPARV+ +VARAGQ GY HRTE+NKK+Y++G G Q
Sbjct: 161 CIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQ 200
>gi|432102534|gb|ELK30105.1| 60S ribosomal protein L3-like protein [Myotis davidii]
Length = 271
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 134/167 (80%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 45 SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREVH 104
Query: 82 KPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PG K+ K+E EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+HLS+E RRRFYK+
Sbjct: 105 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 164
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQI 188
W KSKKKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+
Sbjct: 165 WHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQV 211
>gi|355709847|gb|EHH31311.1| 60S ribosomal protein L3-like protein, partial [Macaca mulatta]
Length = 284
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 130/168 (77%), Gaps = 2/168 (1%)
Query: 144 KSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLME 203
KSKKKAFTK K++ +GKK +Q +KKY V+RV+ H K+ +QKKAH+ME
Sbjct: 2 KSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHQM--KLLPFRQKKAHIME 59
Query: 204 IQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
IQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +LPR
Sbjct: 60 IQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPR 119
Query: 264 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
KTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 120 KTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 167
>gi|55391486|gb|AAH85243.1| Rpl3l protein, partial [Mus musculus]
Length = 281
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/165 (59%), Positives = 129/165 (78%), Gaps = 1/165 (0%)
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
KKAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH+MEIQ+
Sbjct: 1 KKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEIQL 59
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
NGGT+AEKV + EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +LPRKTH
Sbjct: 60 NGGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTH 119
Query: 267 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 120 KGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 164
>gi|119580724|gb|EAW60320.1| ribosomal protein L3, isoform CRA_i [Homo sapiens]
gi|194387408|dbj|BAG60068.1| unnamed protein product [Homo sapiens]
Length = 122
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/122 (77%), Positives = 113/122 (92%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVG+VGYV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NW 142
NW
Sbjct: 121 NW 122
>gi|334362360|gb|AEG78379.1| 60S ribosomal protein L3 [Epinephelus coioides]
Length = 261
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 124/149 (83%), Gaps = 1/149 (0%)
Query: 163 KKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFF 222
+K ++ +KKY V+RV+AHTQ+R + L+QKK+HLME+Q+NGG+I++KVD+A
Sbjct: 1 EKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LRQKKSHLMEVQLNGGSISDKVDWAREKL 59
Query: 223 EKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 282
E+ +PV VF +DEMID+IG+TKG GY+GV +RW +LPRKTHRGLRKVACIGAWHPAR
Sbjct: 60 EQAVPVSNVFNQDEMIDVIGITKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPAR 119
Query: 283 VSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
V+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 120 VAFSVARAGQKGYHHRTEINKKIYKIGQG 148
>gi|134035929|gb|ABO47804.1| ribosomal protein L3 [Omphisa fuscidentalis]
Length = 135
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 118/134 (88%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+ ++PGSK++
Sbjct: 2 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 61
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
KKE EAVTIIETPPM+ VGVVGY++TP GLR+L T+WA+H+SE+ RRRFYKNW K KKK
Sbjct: 62 KKEIVEAVTIIETPPMVAVGVVGYIETPHGLRALLTIWAEHMSEDCRRRFYKNWYKCKKK 121
Query: 149 AFTKYSKQYETDEG 162
AFTK SK+++ + G
Sbjct: 122 AFTKASKKWQDELG 135
>gi|225706934|gb|ACO09313.1| 60S ribosomal protein L3 [Osmerus mordax]
Length = 143
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 115/131 (87%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ETPPM+VVGVVGYV+TPRGLRS T++A+H+S+E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVETPRGLRSFKTIFAEHVSDECKRRFYR 120
Query: 141 NWCKSKKKAFT 151
N ++A T
Sbjct: 121 NCSSQAQRALT 131
>gi|355717191|gb|AES05853.1| ribosomal protein L3-like protein [Mustela putorius furo]
Length = 280
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/164 (59%), Positives = 127/164 (77%), Gaps = 1/164 (0%)
Query: 148 KAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVN 207
KAFTK K++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH+MEIQ+N
Sbjct: 1 KAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEIQLN 59
Query: 208 GGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 267
GGT+AEK +A EKQI V +VF + E+ID+I VTKG+G +GV +RW +LPRKTH+
Sbjct: 60 GGTVAEKGAWAQARLEKQISVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHK 119
Query: 268 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 120 GLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 163
>gi|198285589|gb|ACH85333.1| ribosomal protein L3-like [Salmo salar]
Length = 251
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 120/139 (86%), Gaps = 1/139 (0%)
Query: 173 IKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVF 232
+KKY VVR++AHTQ+R + L+QKK+HLME+Q+NGG+I++KVD+A E+ IP+ VF
Sbjct: 1 MKKYCQVVRIIAHTQMRLLP-LRQKKSHLMEVQLNGGSISDKVDWARERLEQSIPITNVF 59
Query: 233 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 292
+DEMID+IGVTKG GY+GV +RW +LPRKTHRGLRKVACIGAWHP+RV+F+VARAGQ
Sbjct: 60 TQDEMIDVIGVTKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPSRVAFSVARAGQ 119
Query: 293 NGYHHRTEMNKKVYKLGKG 311
GYHHRTE+NKK+YK+G+G
Sbjct: 120 KGYHHRTEINKKIYKIGQG 138
>gi|161899261|ref|XP_001712857.1| ribosomal protein L3 [Bigelowiella natans]
gi|75756351|gb|ABA27245.1| ribosomal protein L3 [Bigelowiella natans]
Length = 370
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 172/289 (59%), Gaps = 19/289 (6%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPR GSLGFLP+KR+ R K + + ++ F K TH++R
Sbjct: 1 MSHRKFEHPRIGSLGFLPKKRSNRIFPSSKTYKEIIHIYYPYISQFASLKVASTHVLRIC 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
SK ++ + VT++E PP+ VVG+ Y + L L T+ +++R
Sbjct: 61 NIVSSKSYQNPIIDEVTLMECPPIEVVGLCAYALSSGHLVKLKTI-------KLQRGL-- 111
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
N +SK +F Q+ T+ L+ I K++ + R L T I+ +K+K +
Sbjct: 112 NLDQSKDISF---DSQFFTN-----FTYSLQFIIKHSVIFRFLCCTFIKTNSMIKKK--Y 161
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
E + GG+ K+++ K+I ++++F ++++ID IG+TKG G +GVV+RWG+TR
Sbjct: 162 FFETDIIGGSPKMKLEFWLKLNNKKIYINSIFHENDIIDAIGITKGHGTKGVVSRWGITR 221
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
LPRKTHRGLRKVACIG W P+RV++T++RAGQ GYH RT NKK+YK+G
Sbjct: 222 LPRKTHRGLRKVACIGPWTPSRVAWTISRAGQKGYHKRTLFNKKIYKIG 270
>gi|82408380|gb|ABB73034.1| ribosomal protein L3 [Mytilus edulis]
Length = 160
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/156 (66%), Positives = 133/156 (85%), Gaps = 1/156 (0%)
Query: 63 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSL 122
LTAF+GYKAGM+HIVR+V++PGSK HKKE EAVTI+E PPMMVVGVVGY++TP GLR+
Sbjct: 6 LTAFIGYKAGMSHIVREVDRPGSKSHKKEIVEAVTILEAPPMMVVGVVGYIETPSGLRAF 65
Query: 123 NTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRV 182
T++A+HLSEE +RRFYKNW +SKKKAF+K +K+++ + GKK I+ K+KKY V+RV
Sbjct: 66 KTIFAEHLSEECKRRFYKNWYRSKKKAFSKSAKKWQDEAGKKEIERDFNKMKKYCRVIRV 125
Query: 183 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYA 218
LAHTQ + MK +QKKAH+MEIQVNGGTI++KVD+A
Sbjct: 126 LAHTQTKLMKK-RQKKAHIMEIQVNGGTISQKVDWA 160
>gi|190895944|gb|ACE96485.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895946|gb|ACE96486.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895948|gb|ACE96487.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895950|gb|ACE96488.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895952|gb|ACE96489.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895954|gb|ACE96490.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895958|gb|ACE96492.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895960|gb|ACE96493.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895962|gb|ACE96494.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895964|gb|ACE96495.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895966|gb|ACE96496.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895968|gb|ACE96497.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895970|gb|ACE96498.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895972|gb|ACE96499.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895974|gb|ACE96500.1| casein kinase II regulatory subunit [Populus tremula]
Length = 99
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/99 (94%), Positives = 99/99 (100%)
Query: 182 VLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 241
VLAHTQIRKMKGLKQKKAHLMEIQVNGGTIA+KVD+AYGFFEKQ+P+DAVFQKDEMID+I
Sbjct: 1 VLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDVI 60
Query: 242 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 280
GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP
Sbjct: 61 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 99
>gi|24645875|ref|NP_731547.1| ribosomal protein L3, isoform D [Drosophila melanogaster]
gi|23170972|gb|AAF54612.2| ribosomal protein L3, isoform D [Drosophila melanogaster]
Length = 161
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 108/126 (85%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKSK 146
NW S+
Sbjct: 121 NWYVSE 126
>gi|190895956|gb|ACE96491.1| casein kinase II regulatory subunit [Populus tremula]
Length = 99
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/99 (93%), Positives = 98/99 (98%)
Query: 182 VLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 241
VLAHTQIRKMKGLKQKKAHLMEIQVNGGTIA+KVD+ YGFFEKQ+P+DAVFQKDEMID+I
Sbjct: 1 VLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFGYGFFEKQVPIDAVFQKDEMIDVI 60
Query: 242 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 280
GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP
Sbjct: 61 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 99
>gi|320542629|ref|NP_731550.2| ribosomal protein L3, isoform G [Drosophila melanogaster]
gi|318068758|gb|AAF54611.2| ribosomal protein L3, isoform G [Drosophila melanogaster]
Length = 138
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 107/125 (85%), Gaps = 1/125 (0%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ETPPM+VVG VGY++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCKS 145
N C S
Sbjct: 121 N-CSS 124
>gi|414587225|tpg|DAA37796.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
Length = 239
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/109 (82%), Positives = 101/109 (92%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQH 129
EKPGSKLHKKETCEAVTIIETPP+++VG+V YVKTPRGLR + + A H
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRKVACIGAWH 109
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/60 (86%), Positives = 55/60 (91%)
Query: 264 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
KT RGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYK+GK GQE+H TEFD
Sbjct: 94 KTPRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDASTEFD 153
>gi|376337862|gb|AFB33487.1| hypothetical protein 2_6618_01, partial [Abies alba]
gi|376337864|gb|AFB33488.1| hypothetical protein 2_6618_01, partial [Abies alba]
gi|376337866|gb|AFB33489.1| hypothetical protein 2_6618_01, partial [Abies alba]
Length = 141
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 96/99 (96%)
Query: 225 QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 284
Q+P+DA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1 QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60
Query: 285 FTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
FTVARAGQNGYHHRTEMNKK+YK+GK GQESH +TEFD
Sbjct: 61 FTVARAGQNGYHHRTEMNKKIYKIGKAGQESHNAMTEFD 99
>gi|345802423|ref|XP_547185.3| PREDICTED: ribosomal protein L3-like [Canis lupus familiaris]
Length = 255
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 116/139 (83%), Gaps = 1/139 (0%)
Query: 173 IKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVF 232
+KKY V+RV+ HTQ+ K+ +QKKAH+MEIQ+NGGT+AEKV +A EKQ+PV +VF
Sbjct: 1 MKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVF 59
Query: 233 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 292
++E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ
Sbjct: 60 SQNEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQ 119
Query: 293 NGYHHRTEMNKKVYKLGKG 311
GYHHRTE+NKK+Y++G+G
Sbjct: 120 KGYHHRTELNKKIYRIGRG 138
>gi|149052059|gb|EDM03876.1| rCG33081 [Rattus norvegicus]
Length = 255
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 115/139 (82%), Gaps = 1/139 (0%)
Query: 173 IKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVF 232
+KKY V+RV+ HTQ+ K+ +QKKAH+MEIQ+NGGT+AEKV +A EKQ+PV +VF
Sbjct: 1 MKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVF 59
Query: 233 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 292
+ E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ
Sbjct: 60 SQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQ 119
Query: 293 NGYHHRTEMNKKVYKLGKG 311
GYHHRTE+NKK+Y++G+G
Sbjct: 120 KGYHHRTELNKKIYRIGRG 138
>gi|376337876|gb|AFB33494.1| hypothetical protein 2_6618_01, partial [Pinus cembra]
Length = 141
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/99 (88%), Positives = 95/99 (95%)
Query: 225 QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 284
Q+P+DA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1 QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60
Query: 285 FTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
FTVARAGQNGYHHRTEMNKK+YK+GK QESH +TEFD
Sbjct: 61 FTVARAGQNGYHHRTEMNKKIYKIGKSDQESHNAMTEFD 99
>gi|361068061|gb|AEW08342.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|376337878|gb|AFB33495.1| hypothetical protein 2_6618_01, partial [Pinus mugo]
gi|376337880|gb|AFB33496.1| hypothetical protein 2_6618_01, partial [Pinus mugo]
gi|376337882|gb|AFB33497.1| hypothetical protein 2_6618_01, partial [Pinus mugo]
gi|383162934|gb|AFG64168.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162936|gb|AFG64169.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162938|gb|AFG64170.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162940|gb|AFG64171.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162942|gb|AFG64172.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162944|gb|AFG64173.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162946|gb|AFG64174.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162948|gb|AFG64175.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162950|gb|AFG64176.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162952|gb|AFG64177.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162954|gb|AFG64178.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162956|gb|AFG64179.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162958|gb|AFG64180.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162960|gb|AFG64181.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162962|gb|AFG64182.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
Length = 141
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/99 (88%), Positives = 95/99 (95%)
Query: 225 QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 284
Q+P+DA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1 QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60
Query: 285 FTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
FTVARAGQNGYHHRTEMNKK+YK+GK QESH +TEFD
Sbjct: 61 FTVARAGQNGYHHRTEMNKKIYKIGKSDQESHKAMTEFD 99
>gi|296109263|ref|YP_003616212.1| 50S ribosomal protein L3 [methanocaldococcus infernus ME]
gi|295434077|gb|ADG13248.1| ribosomal protein L3 [Methanocaldococcus infernus ME]
Length = 333
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 169/293 (57%), Gaps = 25/293 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K+ PR GSLGF PRKRA R +++++P +D RL AF YKAGMTH + +
Sbjct: 2 KYHTPRRGSLGFSPRKRAKRPVPRIRSWPDEDK---VRLQAFPVYKAGMTHGLIKEDNQK 58
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRSLNTVWAQHLSEEVRRRFYKNWC 143
S +E +T++E PP+ V G+ Y + R L +L +WA +L +E+ R+
Sbjct: 59 SPRAGQEVFTPMTVLEAPPINVFGIRVYGRNERNYLTTLTEIWADNLDKELSRKI----- 113
Query: 144 KSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLME 203
K KK E +K ++ L++IK VRVL HT K+ L +KK ++E
Sbjct: 114 KLPKK------------EERKGVEY-LDEIKDKIEDVRVLVHTN-PKLTCLPKKKPEILE 159
Query: 204 IQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
I++ G + E+++YA KQ+ + VFQ+ E++D IGVTKGKG++GVV RWGV PR
Sbjct: 160 IRIGGKDLEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGVVKRWGVKIQPR 219
Query: 264 KTHR-GL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
K R G+ R V IG W P + +TV R GQ GYH RTE NK++ K+G G+E
Sbjct: 220 KHRRQGVGRHVGSIGPWQPKMIMWTVPRPGQMGYHQRTEYNKRILKIGNNGEE 272
>gi|294917113|ref|XP_002778404.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239886795|gb|EER10199.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 230
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/131 (66%), Positives = 108/131 (82%), Gaps = 1/131 (0%)
Query: 185 HTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVT 244
HTQ+ K+K L QKKAH++E+QVNGG++++KV++ FEK++P+ +VF KDEM+DIIGVT
Sbjct: 2 HTQVSKVK-LTQKKAHIVEVQVNGGSVSDKVEFCQSLFEKEVPISSVFDKDEMVDIIGVT 60
Query: 245 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK 304
KG G V TRWGVTRL RKTHRGLRKVACIGAWHPARV F V RAGQ GYHHR E+NKK
Sbjct: 61 KGHGNTSVTTRWGVTRLARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYHHRVEINKK 120
Query: 305 VYKLGKGGQES 315
+Y++GK +E
Sbjct: 121 IYRIGKALRED 131
>gi|22758910|gb|AAN05614.1| ribosomal protein L3 [Argopecten irradians]
Length = 254
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/137 (67%), Positives = 112/137 (81%), Gaps = 2/137 (1%)
Query: 175 KYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQK 234
KY V+R AHTQ + +K +QKKAH+MEIQVNGGTI++KVD+A E +PV +VF
Sbjct: 9 KYCKVIR-YAHTQTKLLKK-RQKKAHIMEIQVNGGTISQKVDWAREKMESSVPVGSVFAM 66
Query: 235 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNG 294
DE IDIIGVTKGKG +GV +RW +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ G
Sbjct: 67 DENIDIIGVTKGKGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKG 126
Query: 295 YHHRTEMNKKVYKLGKG 311
YHHRTE+NKK+Y++G+G
Sbjct: 127 YHHRTEINKKIYRMGEG 143
>gi|376337868|gb|AFB33490.1| hypothetical protein 2_6618_01, partial [Larix decidua]
gi|376337870|gb|AFB33491.1| hypothetical protein 2_6618_01, partial [Larix decidua]
gi|376337872|gb|AFB33492.1| hypothetical protein 2_6618_01, partial [Larix decidua]
gi|376337874|gb|AFB33493.1| hypothetical protein 2_6618_01, partial [Larix decidua]
Length = 141
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/99 (87%), Positives = 95/99 (95%)
Query: 225 QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 284
Q+P+DA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1 QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60
Query: 285 FTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
FTVARAGQNGYHHRTEMNKK+YK+GK +ESH +TEFD
Sbjct: 61 FTVARAGQNGYHHRTEMNKKIYKIGKIDEESHKAMTEFD 99
>gi|70927424|ref|XP_736100.1| ribosomal protein L3 [Plasmodium chabaudi chabaudi]
gi|56510349|emb|CAH85528.1| ribosomal protein L3, putative [Plasmodium chabaudi chabaudi]
Length = 155
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 120/161 (74%), Gaps = 6/161 (3%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKD+ TAF+GYK+GM+HIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDNKELAPHFTAFMGYKSGMSHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+ PGSKLHKKE EA TI+E PM+VVG+VGY +TP+GL+ L VWA H+S+E RRR+YK
Sbjct: 61 D-PGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLKVLTAVWANHVSDEFRRRYYK 119
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVR 181
NW KS KKAFTK E + K ++I+KY +++R
Sbjct: 120 NWYKSDKKAFTKCLNIPEATKEK-----LYDRIEKYCTILR 155
>gi|26245428|gb|AAN77574.1| ribosomal protein L3 [Fundulus heteroclitus]
Length = 154
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
Query: 95 AVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYS 154
AVTI+ETPPM+VVGVVGYV TPRGLRS T++++H+S+E +RRFY+NW KSKKKAFTKY
Sbjct: 1 AVTIVETPPMVVVGVVGYVSTPRGLRSFKTIFSEHMSDECKRRFYRNWYKSKKKAFTKYC 60
Query: 155 KQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEK 214
K+++ +EGKK ++ +KKY VVRV+AHTQ+R + L+QKK+HLME+Q+NGGTI++K
Sbjct: 61 KKWQDEEGKKQLEKDFSAMKKYCQVVRVIAHTQMR-LLPLRQKKSHLMEVQLNGGTISDK 119
Query: 215 VDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGY 249
VD+A E+Q+ V AVF +DEMID+IGVTKG G+
Sbjct: 120 VDWAREKLEQQVAVSAVFSQDEMIDVIGVTKGHGW 154
>gi|40641603|emb|CAE54281.1| putative ribosomal protein [Triticum aestivum]
Length = 98
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/96 (91%), Positives = 94/96 (97%)
Query: 183 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIG 242
+AHTQIRKMKGLKQKKAHLMEIQ+NGGTIA+KVDY Y FFEK++P+DAVFQKDEMIDIIG
Sbjct: 1 IAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYSFFEKEVPIDAVFQKDEMIDIIG 60
Query: 243 VTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 278
VTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW
Sbjct: 61 VTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 96
>gi|356871225|emb|CCC86741.1| ribosomal subunit, partial [Millerozyma farinosa]
Length = 150
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/130 (69%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
Query: 194 LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVV 253
L QKKAHL EIQVNGG+I++KVD+A FEK + VD+VF+++EMID I VTKG G+EGV
Sbjct: 2 LSQKKAHLAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVT 61
Query: 254 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
RWG +LPRKTHRGLRKVACIGAWHPA V +TV RAGQNGYHHRT +N KVY++G G
Sbjct: 62 HRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTVPRAGQNGYHHRTSINHKVYRVGSGED 121
Query: 314 ESHTGITEFD 323
ES G TEFD
Sbjct: 122 ES-NGATEFD 130
>gi|408381922|ref|ZP_11179469.1| 50S ribosomal protein L3P [Methanobacterium formicicum DSM 3637]
gi|407815370|gb|EKF85955.1| 50S ribosomal protein L3P [Methanobacterium formicicum DSM 3637]
Length = 336
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 158/289 (54%), Gaps = 25/289 (8%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFP-KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 86
PR GS+ F PRKRAAR + ++P +++P L F GYK GMTH+ + S
Sbjct: 6 QPRKGSVAFSPRKRAARESPTISSWPEREEPG----LLGFPGYKVGMTHVTQLDNTKNSP 61
Query: 87 LHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
E VT++ETPP++V+G+ Y +T RGL+++ V A E+++R+
Sbjct: 62 TEGMEISTPVTVVETPPIVVMGIRAYTRTSRGLKAMTDVLASEFDEDLKRKI-------- 113
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
+Y+++ S++ L+K+ + +R L HT+ R M + +KK LME +
Sbjct: 114 -----SVPAEYDSEAQLASLKENLDKVVE----IRALIHTKPR-MASVPKKKPELMECGI 163
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G ++ +K+DYA G K+I VF E D I VTKGKG++GV+ RWGV K
Sbjct: 164 GGNSVEDKLDYAAGVLGKEINPADVFADGEHTDAIAVTKGKGFQGVIKRWGVRIQYGKAA 223
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
R R V IG W PAR +TV AGQ GYH RTE NKK+ K+G+ Q
Sbjct: 224 RSSKARVVGSIGPWTPARTMWTVPMAGQMGYHQRTEFNKKILKIGEAEQ 272
>gi|356871227|emb|CCC86742.1| ribosomal subunit, partial [Millerozyma miso]
Length = 150
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 106/130 (81%), Gaps = 1/130 (0%)
Query: 194 LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVV 253
L QKKAHL EIQVNGG+I++KVD+A FEK + VD+VF+++EM+D I VTKG G+EGV
Sbjct: 2 LSQKKAHLAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMVDAIAVTKGHGFEGVT 61
Query: 254 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
RWG +LPRKTHRGLRKVACIGAWHPA V +TV RAGQNGYHHRT +N K+Y++G G
Sbjct: 62 HRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTVPRAGQNGYHHRTSINHKIYRIGSGDD 121
Query: 314 ESHTGITEFD 323
ES+ G TEFD
Sbjct: 122 ESN-GATEFD 130
>gi|238601436|ref|XP_002395411.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553]
gi|215466097|gb|EEB96341.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553]
Length = 219
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/131 (66%), Positives = 106/131 (80%), Gaps = 1/131 (0%)
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
GL KKAHLMEIQVNGG+IA+KV+YA FEK V +VF++DE ID+I VTKG G+EGV
Sbjct: 2 GLSHKKAHLMEIQVNGGSIADKVEYAQNLFEKPFEVSSVFEQDENIDVIAVTKGHGFEGV 61
Query: 253 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG 312
RWG +LPRKTH+GLRKVACIGAWHP++V F+VARAGQ+GYHHRTE+NKK+Y++G G
Sbjct: 62 THRWGTKKLPRKTHKGLRKVACIGAWHPSKVMFSVARAGQSGYHHRTELNKKIYRIGSGS 121
Query: 313 QESHTGITEFD 323
E + TE D
Sbjct: 122 DEGNAS-TEHD 131
>gi|356871217|emb|CCC86737.1| ribosomal subunit, partial [Millerozyma farinosa]
gi|356871219|emb|CCC86738.1| ribosomal subunit, partial [Millerozyma farinosa]
gi|356871221|emb|CCC86739.1| ribosomal subunit, partial [Millerozyma farinosa]
gi|356871223|emb|CCC86740.1| ribosomal subunit, partial [Millerozyma farinosa]
Length = 150
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/130 (68%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
Query: 194 LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVV 253
L QKKAHL EIQVNGG+I++KVD+A FEK + VD+VF+++EMID I VTKG G+EGV
Sbjct: 2 LSQKKAHLAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVT 61
Query: 254 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
RWG +LPRKTHRGLRKVACIGAWHPA V ++V RAGQNGYHHRT +N KVY++G G
Sbjct: 62 HRWGTKKLPRKTHRGLRKVACIGAWHPANVQWSVPRAGQNGYHHRTSINHKVYRVGSGED 121
Query: 314 ESHTGITEFD 323
ES G TEFD
Sbjct: 122 ES-NGATEFD 130
>gi|343459071|gb|AEM37694.1| ribosomal protein L3 [Epinephelus bruneus]
Length = 236
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 82/118 (69%), Positives = 105/118 (88%)
Query: 194 LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVV 253
L+QKK+HLME+Q+NGG+I++KVD+A E+ +PV+ VF +DEMID+IG+TKG GY+GV
Sbjct: 6 LRQKKSHLMEVQLNGGSISDKVDWAREKLEQAVPVNNVFTQDEMIDVIGITKGHGYKGVT 65
Query: 254 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 66 SRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 123
>gi|312137075|ref|YP_004004412.1| 50S ribosomal protein L3 [Methanothermus fervidus DSM 2088]
gi|311224794|gb|ADP77650.1| LSU ribosomal protein L3P [Methanothermus fervidus DSM 2088]
Length = 333
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 152/287 (52%), Gaps = 22/287 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA+R ++K++P+ K L A GYK GMTH++ K
Sbjct: 3 KHHRPRRGSLAFSPRKRASRETPRIKSWPE---IKDTCLLAAAGYKVGMTHVMAIDNKKN 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S E VTIIETPP+ V+G+ Y +T RGL++L V A L E++ RR
Sbjct: 60 SPTEGMEVFTPVTIIETPPLTVMGIRAYERTSRGLKTLTDVLADDLKEDLERRI------ 113
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
K Y+ D+ I E+ K Y VRVL HT R + G+ +KK + E
Sbjct: 114 -------NLPKNYDKDKALDKI----EENKDYIEEVRVLVHTNPRLVTGVPKKKPEIFEC 162
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
+ G EK++YA K + + +F + E +D I VTKGKG++G V RWG+ K
Sbjct: 163 GLGGKDPQEKLEYALELLGKDVKISEIFSEGEYVDTIAVTKGKGFQGPVKRWGIKIQNAK 222
Query: 265 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
T R R + +G W P+R + V +AGQ GYH RTE NK + K+G
Sbjct: 223 TARSGKGRHIGSLGPWTPSRTMWRVPQAGQTGYHRRTEYNKMIMKIG 269
>gi|432328989|ref|YP_007247133.1| archaeal ribosomal protein L3 [Aciduliprofundum sp. MAR08-339]
gi|432135698|gb|AGB04967.1| archaeal ribosomal protein L3 [Aciduliprofundum sp. MAR08-339]
Length = 340
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 154/280 (55%), Gaps = 22/280 (7%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 87
HPR GS+ + PRKRAA +++ +P D R+ F GYKAGMTH+ + +
Sbjct: 6 HPRRGSMAYYPRKRAASPVPRIRTWP--DIEDGPRIQGFAGYKAGMTHVFTVDWRKHTTT 63
Query: 88 HKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKK 147
+E VT+IE PPM V GV Y +T GLRS+ VW ++L E+ RRF
Sbjct: 64 AGQEIWTPVTVIEVPPMKVAGVRFYERTIYGLRSIGEVWDENLDRELSRRF--------- 114
Query: 148 KAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVN 207
K+Y S + L +IK +R++ HTQ R + G+ +K +MEI+V
Sbjct: 115 ----PLPKEY-------SEEVALSRIKGDIEDIRLIVHTQPRLVSGIPKKAPDIMEIRVG 163
Query: 208 GGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 267
GGT+ E+ DYA K+I + + +D++ +TKGKG++G V R+GV L +K +
Sbjct: 164 GGTVEERKDYALNLLGKEIKFSDFKSEGKFVDVVAITKGKGFQGHVKRFGVKLLHQKNRK 223
Query: 268 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK 307
R + +G WHP V +TV +AGQ GYH RTE NK++ K
Sbjct: 224 HRRMIGTLGPWHPDWVRYTVPQAGQMGYHQRTEYNKRIIK 263
>gi|226480232|emb|CAX78780.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 252
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 85/119 (71%), Positives = 103/119 (86%)
Query: 195 KQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVT 254
+QKKAH+MEIQVNGGTI++KVD+ FEKQIPV VF +DEMID+IGVTKGKG++GV +
Sbjct: 7 RQKKAHIMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTS 66
Query: 255 RWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
RW +LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKK+Y++G G Q
Sbjct: 67 RWHTKKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQ 125
>gi|14600545|ref|NP_147062.1| 50S ribosomal protein L3 [Aeropyrum pernix K1]
gi|6685859|sp|Q9YFM2.1|RL3_AERPE RecName: Full=50S ribosomal protein L3P
gi|5103618|dbj|BAA79139.1| 50S ribosomal protein L3P [Aeropyrum pernix K1]
Length = 344
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 169/298 (56%), Gaps = 27/298 (9%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M RK PR GSLGF PRKRA+R +VK +P+ D KP L AFLGY+AGMTH+
Sbjct: 1 MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVD 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTP-RGLRSLNTVWAQHLSE-EVRRRF 138
++PG KE VTI+ETPPM V V Y P RG SL WAQ E E++RR
Sbjct: 60 DRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRRI 119
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
++TD+ KS++ +L+K A VR++A +Q + GL +KK
Sbjct: 120 -------------STLGSFDTDKMLKSLEERLDK----AEDVRLIAASQPKLAGGLSKKK 162
Query: 199 AHLMEIQVNGGTIAEKV-DYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
L+EI+V G + K+ DYA I V+ VF++ +++D+I VTKGKG++GV+ RWG
Sbjct: 163 PDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWG 222
Query: 258 VTRLPR--KTHRGLRKVACIGAWHPARVSF-TVARAGQNGYHHRTEMNKKVYKLGKGG 312
V LPR K +G R+ IGA R +F +AGQ G+H RTE NK++ + G
Sbjct: 223 VKELPRWHKHRKGSRR---IGARSHGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDG 277
>gi|256810689|ref|YP_003128058.1| 50S ribosomal protein L3P [Methanocaldococcus fervens AG86]
gi|256793889|gb|ACV24558.1| ribosomal protein L3 [Methanocaldococcus fervens AG86]
Length = 335
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 163/292 (55%), Gaps = 25/292 (8%)
Query: 26 FEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 85
PR GSL F PRKRA R +++++P++D RL AF YKAGMTH + P S
Sbjct: 5 INRPRRGSLAFSPRKRAKRPVPRIRSWPEEDN---VRLQAFPVYKAGMTHAFIKEDNPKS 61
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRSLNTVWAQHLSEEVRRRFYKNWCK 144
+E VT++E PP+ V + Y + R L +L VWA +L +E+ R+ K
Sbjct: 62 PNAGQEVFTPVTVLEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI-----K 116
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
KK E +K+++ LE IK VRVL HT K+ L +KK ++EI
Sbjct: 117 LPKK------------EERKTVE-DLEAIKDKIEDVRVLVHTN-PKLTCLPKKKPEILEI 162
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
++ G I E+++YA KQ+ + VFQ+ E++D IGVTKGKG++G V RWGV + +
Sbjct: 163 RIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGK 222
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R V IG W P V +TV GQ GYH RTE NK++ K+G G+E
Sbjct: 223 HARKGVGRHVGSIGPWQPKMVMWTVPMPGQMGYHQRTEYNKRILKIGNNGEE 274
>gi|289597193|ref|YP_003483889.1| 50S ribosomal protein L3 [Aciduliprofundum boonei T469]
gi|289534980|gb|ADD09327.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
Length = 340
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 156/282 (55%), Gaps = 26/282 (9%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 85
HPR GS+ + PRKRAA +++ +P+ D P R+ F GYKAGMTH+ + +
Sbjct: 6 HPRRGSMAYYPRKRAASPIPRIRTWPEIEDGP----RIQGFAGYKAGMTHVFTIDWRKHT 61
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKS 145
+E VT+IE PPM V GV Y +T GL+S+ VW ++L +E+ RRF
Sbjct: 62 TTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSIGEVWDENLDKELARRF------- 114
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
K+Y D+ LE+IK +R++ HTQ R + G+ +K +MEI+
Sbjct: 115 ------PLPKEYSKDKA-------LERIKGDIEDIRLIVHTQPRLVSGVPKKAPDIMEIR 161
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
V GGTI + +YA K+I + +D+I +TKGKG++G V R+GV L +K
Sbjct: 162 VGGGTIDARKEYALNLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLNQKN 221
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK 307
+ R + +G WHP V +TV +AGQ GYH RTE NK++ K
Sbjct: 222 RKHRRMIGTLGPWHPDWVRYTVPQAGQMGYHQRTEYNKRIVK 263
>gi|254168629|ref|ZP_04875472.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
gi|197622463|gb|EDY35035.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
Length = 340
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 156/282 (55%), Gaps = 26/282 (9%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 85
HPR GS+ + PRKRAA +++ +P+ D P R+ F GYKAGMTH+ + +
Sbjct: 6 HPRRGSMAYYPRKRAASPIPRIRTWPEIEDGP----RIQGFAGYKAGMTHVFTIDWRKHT 61
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKS 145
+E VT+IE PPM V GV Y +T GL+S+ VW ++L +E+ RRF
Sbjct: 62 TTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSIGEVWDENLDKELARRF------- 114
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
K+Y D+ LE+IK +R++ HTQ + + G+ +K +MEI+
Sbjct: 115 ------PLPKEYSKDKA-------LERIKGDIEDIRLIVHTQPKLVSGVPKKAPDIMEIR 161
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
V GGTI + +YA K+I + +D+I +TKGKG++G V R+GV L +K
Sbjct: 162 VGGGTIDARKEYALNLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLNQKN 221
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK 307
+ R + +G WHP V +TV +AGQ GYH RTE NK++ K
Sbjct: 222 RKHRRMIGTLGPWHPDWVRYTVPQAGQMGYHQRTEYNKRIVK 263
>gi|414588496|tpg|DAA39067.1| TPA: hypothetical protein ZEAMMB73_537924, partial [Zea mays]
Length = 124
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/103 (81%), Positives = 96/103 (93%)
Query: 84 GSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWC 143
S+LHKKETCEAVTIIETPP+++VG+V YVKTPRGLR+LN+VWAQHLSEEVRRRFYKNWC
Sbjct: 22 SSELHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWC 81
Query: 144 KSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHT 186
KSKKKAFTKY+ +YE D GKK IQ QLEK+KKYASV+RV+AHT
Sbjct: 82 KSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHT 124
>gi|288560108|ref|YP_003423594.1| 50S ribosomal protein L3 [Methanobrevibacter ruminantium M1]
gi|288542818|gb|ADC46702.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1]
Length = 336
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 155/285 (54%), Gaps = 25/285 (8%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH-IVRDVEKPGSK 86
PR GS+ F PRKR A+ ++KA+P ++ K L GYKAGMTH +V D +K S
Sbjct: 6 QPRKGSVAFSPRKRVAKETPRIKAWPSNEEPK---LLGLAGYKAGMTHAMVVDNDK-NSP 61
Query: 87 LHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
H E VT++E PP++++G+ Y KT GL+++ V A +L EE+ R+
Sbjct: 62 SHGMEVFTPVTVLEVPPLVILGIRSYEKTAHGLKAITEVIADNLDEELSRKI-------- 113
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
K Y+ E IQ LEK ++ VRVL HT KM + +KK + E +
Sbjct: 114 -----TLPKDYDQSEAIAKIQDALEKTEE----VRVLVHTN-PKMASVPKKKPEIFECAL 163
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G + EK++YA G ++I +F + + +D I TKGKG +GVV RW + K
Sbjct: 164 GGSSAEEKLNYALGILGQEIRASDIFSEGQYVDAIATTKGKGVQGVVKRWNIRIQYGKAM 223
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
R R V IG W P R +TVA+AGQ GYH RTE NKKV K+G
Sbjct: 224 RSGKGRHVGSIGPWSPERTMWTVAQAGQMGYHKRTEFNKKVIKIG 268
>gi|337283644|ref|YP_004623118.1| 50S ribosomal protein L3P [Pyrococcus yayanosii CH1]
gi|334899578|gb|AEH23846.1| 50S ribosomal protein L3P [Pyrococcus yayanosii CH1]
Length = 359
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 168/296 (56%), Gaps = 16/296 (5%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSLGF PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KVHRPRRGSLGFTPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEE---VRRRFYKN 141
+ KE VTI+ETPP+ V GV Y + GL + V + + ++ K
Sbjct: 60 LT-NGKEIFMPVTIVETPPLRVFGVRAYRQGYLGLETATEVIVPDFTLDNYVTKKGKQKT 118
Query: 142 WCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVV--RVLAHTQ--IRKMKGLKQK 197
+ + ++ K Y D+ ++ + +LE + K +V R L TQ I K+K K
Sbjct: 119 FYELLRRRIATLPKNYTEDDFQQKL-GELEDLIKEGEIVEVRALVSTQPWIIKLK----K 173
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
K +ME + G ++ EK +Y K++ V V ++ E++D+I VTKGKG +GV+ RWG
Sbjct: 174 KPEVMEYAIGGTSVEEKFNYIKERLGKELRVKDVLKEGELLDVIAVTKGKGTQGVIKRWG 233
Query: 258 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
V K +G RKVA IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ G+
Sbjct: 234 VKLRAHKDSKGRRKVASIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK 289
>gi|336121494|ref|YP_004576269.1| 50S ribosomal protein L3 [Methanothermococcus okinawensis IH1]
gi|334856015|gb|AEH06491.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1]
Length = 333
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 161/292 (55%), Gaps = 25/292 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA R K++++P D+ RL AF YKAG TH + P
Sbjct: 4 KRNRPRRGSLAFSPRKRAKRPVPKIRSWPNDEK---VRLQAFPVYKAGTTHALVKENNPK 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S +++ VT++E P + V G+ Y KT +GL++L VWA++L +E+ R+
Sbjct: 61 SPNAEQDVFTPVTVLEAPDITVAGIRVYEKTTKGLKTLTEVWAENLDKELNRKIT----- 115
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
E K +I+ +L+++ + VR + HT K L +KK ++EI
Sbjct: 116 -------------TPKEPKANIE-KLDEVADKIAEVRAIVHTN-PKNTNLPKKKPEIIEI 160
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
++ G I+EK+ YA K + ++ VF E ID I +TKGKG++G V RWG+ + +
Sbjct: 161 RIGGNNISEKLAYAKEILGKTLSINDVFTDGEFIDTIAITKGKGFQGPVKRWGIKIQFGK 220
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
++G+ R IG W P RV +TV AGQ GYH RTE NK++ K+G G+E
Sbjct: 221 HRNKGVGRHTGSIGPWTPKRVMWTVPMAGQMGYHQRTEYNKRILKIGNNGEE 272
>gi|327400872|ref|YP_004341711.1| 50S ribosomal protein L3 [Archaeoglobus veneficus SNP6]
gi|327316380|gb|AEA46996.1| ribosomal protein L3 [Archaeoglobus veneficus SNP6]
Length = 329
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 165/293 (56%), Gaps = 32/293 (10%)
Query: 27 EH-PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 85
EH PR GSLGF PRKRA+ +++A+P+ RL F GYK GMTH+V ++ S
Sbjct: 3 EHRPRRGSLGFSPRKRASSIVPRIRAWPE---CSETRLLGFAGYKVGMTHVVMVDDRKNS 59
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKS 145
+ +E VT+IETPPM V G+ Y KTP G++ VW+ L + RR +
Sbjct: 60 LTYGEEIVVPVTVIETPPMKVAGIRVYRKTPYGMQIAGEVWSSDLDNFLGRRL-----QL 114
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKY--ASVVRVLAHTQIRKMKGLKQKKAHLME 203
KK+ +EK+K+ A+ VRV+ +TQ + G+ +K +ME
Sbjct: 115 PKKS------------------PDVEKLKEIDDAAEVRVITYTQPYLITGIPKKVPDVME 156
Query: 204 IQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
+V GG ++ +DYA K+I V V+ + +ID++ +TKGKG++G V RWGV L
Sbjct: 157 HKV-GGDVSSALDYAIEKLGKEIRVSEVYSEGAIIDVLSITKGKGFQGPVKRWGVITLDA 215
Query: 264 KTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
K R R+V C+G W+P + +TV +AGQ G+H RTE NK++ K+G+ G E
Sbjct: 216 KHARSSKHRRVGCLGPWNPHHIRWTVPQAGQMGFHQRTEFNKRIIKIGEDGSE 268
>gi|333911089|ref|YP_004484822.1| 50S ribosomal protein L3 [Methanotorris igneus Kol 5]
gi|333751678|gb|AEF96757.1| ribosomal protein L3 [Methanotorris igneus Kol 5]
Length = 335
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 158/292 (54%), Gaps = 23/292 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA R +++++P +D RL AF YKAGM+H + P
Sbjct: 4 KRNRPRRGSLAFSPRKRAKRPVPRIRSWPDEDK---VRLQAFPVYKAGMSHALVKENNPN 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S +E +TI+E P + V + Y K RGL++L VWA L +E+ R+
Sbjct: 61 SPNANQEVFTPITILEAPDINVFAIRVYGKDTRGLKTLTEVWADELDKELARKI------ 114
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
K K ++ DE L+ + + VRVL HT K+ L +KK ++EI
Sbjct: 115 ---KTLPKKEERKTVDE--------LDNLIDKIADVRVLVHTN-PKLTCLPKKKPEVLEI 162
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
++ G I E+++YA K++ + VF + E +D I +TKGKG++G V RWGV + +
Sbjct: 163 RIGGKDIQERLNYAKEILGKKVSITDVFSEGEFVDTIAITKGKGFQGQVKRWGVKIQFGK 222
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R V IG W P RV +TV GQ GYH RTE NK++ K+G G+E
Sbjct: 223 HQRKGVGRHVGSIGPWTPKRVMWTVPMPGQMGYHQRTEYNKRILKIGNNGEE 274
>gi|300710375|ref|YP_003736189.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
gi|448294699|ref|ZP_21484778.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
gi|299124058|gb|ADJ14397.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
gi|445586376|gb|ELY40658.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
Length = 337
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 157/286 (54%), Gaps = 22/286 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR RA + ++P DD +P L F GYKAGM+H+V ++ S L
Sbjct: 7 PRKGSLGFGPRTRATSEVPRFNSWPDDD-GQPA-LQGFAGYKAGMSHVVMVNDEANSPLE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y +T G++ VWA+ +E+ R S+
Sbjct: 65 GTEQTVPVTIVETPPMRAVALRAYEQTAYGMQPRGEVWAEEFDDELDRALD---LPSEAD 121
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ + +EGK +RV+ HT ++G+ +KK +ME +V G
Sbjct: 122 PSARDDLETALEEGK-------------VDDLRVITHTSPASLRGVPKKKPDVMETRVGG 168
Query: 209 GTIAEKVDYAYGFFEKQIPVDA--VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++AE+ ++A+G ++ +A VF+ E +D+ GVTKGKG +G V RWGV + K
Sbjct: 169 GSLAERAEFAFGLLDEGGEHEATDVFRAGEYLDVSGVTKGKGTQGPVKRWGVQKRKGKHA 228
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+
Sbjct: 229 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLLALGE 274
>gi|15668348|ref|NP_247144.1| 50S ribosomal protein L3P [Methanocaldococcus jannaschii DSM 2661]
gi|1710558|sp|P54014.1|RL3_METJA RecName: Full=50S ribosomal protein L3P
gi|1590928|gb|AAB98161.1| LSU ribosomal protein L3P (rplC) [Methanocaldococcus jannaschii DSM
2661]
Length = 335
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 162/292 (55%), Gaps = 25/292 (8%)
Query: 26 FEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 85
PR GSL F PRKRA R +++++P++D RL AF YKAGM+H + P S
Sbjct: 5 INRPRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPKS 61
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRSLNTVWAQHLSEEVRRRFYKNWCK 144
+E +TI+E PP+ V + Y + R L +L VWA +L +E+ R+ K
Sbjct: 62 PNAGQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI-----K 116
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
KK E +K+++ LE +K VRVL HT K+ L +KK ++EI
Sbjct: 117 LPKK------------EDRKTVE-DLEALKDKIEDVRVLVHTN-PKLTCLPKKKPEILEI 162
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
++ G I E+++YA KQ+ + VFQ+ E++D IGVTKGKG++G V RWGV + +
Sbjct: 163 RIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGK 222
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R V IG W P V ++V GQ GYH RTE NK++ K+G G E
Sbjct: 223 HARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE 274
>gi|11499509|ref|NP_070750.1| 50S ribosomal protein L3P [Archaeoglobus fulgidus DSM 4304]
gi|3914742|sp|O28354.1|RL3_ARCFU RecName: Full=50S ribosomal protein L3P
gi|2648621|gb|AAB89331.1| LSU ribosomal protein L3P (rpl3P) [Archaeoglobus fulgidus DSM 4304]
Length = 331
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 166/292 (56%), Gaps = 25/292 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K+ PR GSL F PRKRA +++A+P+ D R+ F GYKAGMTH+V ++
Sbjct: 2 KYHRPRRGSLAFSPRKRAKSIVPRIRAWPECDR---VRMQGFAGYKAGMTHVVMIDDRKN 58
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S + +E VT+IETPPM V V Y KT G++ VW+ +L + + RR N K
Sbjct: 59 SPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAEVWSNNLDDFLDRRL--NLPK 116
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
K+ + ++ K +++ AS VRV+ +TQ + G+ +K +ME
Sbjct: 117 ----------KEPDVEKLKAAVENG-------ASEVRVVTYTQPYLITGVPKKVPDVMEH 159
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
++ GG + E +DYA K+I V VF + +ID+I VTKGKG++G V RWGV L K
Sbjct: 160 RI-GGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAK 218
Query: 265 THRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
R R+V +G W+P V +TV +AGQ G+H RTE NK++ K+G+ G+E
Sbjct: 219 HARSSKHRRVGNLGPWNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE 270
>gi|284162460|ref|YP_003401083.1| 50S ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
gi|284012457|gb|ADB58410.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
Length = 332
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 156/294 (53%), Gaps = 28/294 (9%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K+ PR GSL F PRKRA +++++P D +P +L F GYKAGMTH++ ++
Sbjct: 2 KYSRPRRGSLAFSPRKRAKDVIPRIRSWP-DYEGEP-KLLGFAGYKAGMTHVIMIDDRKN 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S + +E VT++E PPM V G+ Y T GL+ VW L E + RR
Sbjct: 60 SPTYGEEIVVPVTVLECPPMKVAGIRVYKNTMYGLQIAKEVWTTELDEHLSRRL------ 113
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASV--VRVLAHTQIRKMKGLKQKKAHLM 202
K I +E +K ++ VR++ +TQ + G+ K +M
Sbjct: 114 ----------------PLPKKINTDVESLKNVENIAEVRLITYTQPYLITGVPSKTPDVM 157
Query: 203 EIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 262
E +V G I +DYA K+I V VFQ+ ID+I +TKGKG++G V RWGV L
Sbjct: 158 EYKVGGSDINAVLDYAISKLGKEIRVSEVFQEGAFIDVIAITKGKGFQGPVKRWGVITLD 217
Query: 263 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
K R R+V +G W P RV +TV +AGQ G+H RTE NK++ K+G+ G+E
Sbjct: 218 AKHARSSKHRRVGTLGPWTPHRVRWTVPQAGQMGFHQRTEYNKRIIKIGENGEE 271
>gi|429190344|ref|YP_007176022.1| 50S ribosomal protein L3 [Natronobacterium gregoryi SP2]
gi|448326256|ref|ZP_21515623.1| 50S ribosomal protein L3P [Natronobacterium gregoryi SP2]
gi|429134562|gb|AFZ71573.1| archaeal ribosomal protein L3 [Natronobacterium gregoryi SP2]
gi|445612913|gb|ELY66630.1| 50S ribosomal protein L3P [Natronobacterium gregoryi SP2]
Length = 339
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 155/294 (52%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P DD +P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDQANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP GL + VW ++E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTPYGLNPVTEVWTDEFADELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y++D + ++ LE+ + VRV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDSDAAEDELRGLLEEGR--VDDVRVITHTVPSEVPSMPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+ + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDFGLELLVDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDMGNGADATVDG 284
>gi|304314253|ref|YP_003849400.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
Marburg]
gi|302587712|gb|ADL58087.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
Marburg]
Length = 337
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 156/289 (53%), Gaps = 24/289 (8%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPK-DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 86
PR GS+ F PRKRAAR +VK++P+ D+P L A GYKAGMTH++ + S
Sbjct: 6 QPRKGSVAFSPRKRAARETPRVKSWPQVDEPG----LLALAGYKAGMTHVMMVDNQKNSP 61
Query: 87 LHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
E VTI+E PP+ V+ V Y KT RGL++L V A E++RR+
Sbjct: 62 TEGMEVSTPVTILEVPPLTVMAVRAYEKTSRGLKTLGEVLATETKEDLRRK--------- 112
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
T ++ Y+ + + I++ +E Y + VRV+ HT R + + +KK + E +
Sbjct: 113 ---LTPPAEDYDQEAAIERIRSNME----YVADVRVIVHTNPR-LASVPKKKPEVFECGL 164
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G T EK +YA G K + +F + +D I VTKGKG++G V RWG+ K
Sbjct: 165 GGKTPEEKFEYALGILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGKAA 224
Query: 267 RGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
R R + +G W P+R +TV +AGQ GYH RTE NK++ K+G +
Sbjct: 225 RSSKGRHIGSLGPWTPSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASE 273
>gi|448618114|ref|ZP_21666459.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
gi|445747669|gb|ELZ99124.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
Length = 338
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 160/297 (53%), Gaps = 27/297 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAVKEVPRIKSWPDDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF---YKNWCKS 145
E VT++ETPPM V + Y +TP G++ VWA +E+ R ++ +S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPKTEVWASEFHDELDRVLDLPAEDTFES 124
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
A + + E D+ +RV+ HT ++K + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPAELKNVPKKKPDVMETR 166
Query: 206 VNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
V GG++ E+ D+A E+ + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVEEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 264 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+G S G
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDASVEG 283
>gi|325958531|ref|YP_004289997.1| 50S ribosomal protein L3 [Methanobacterium sp. AL-21]
gi|325329963|gb|ADZ09025.1| ribosomal protein L3 [Methanobacterium sp. AL-21]
Length = 337
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 159/289 (55%), Gaps = 24/289 (8%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 87
PR GS+ F PRKRAA+ KV+++P+ + S C L F GYK GMTH+ S
Sbjct: 6 QPRSGSMAFSPRKRAAKETPKVRSWPETEES--C-LLGFPGYKVGMTHVTMLDNVKNSPT 62
Query: 88 HKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKK 147
E VTI+ETPP++V+GV Y K RGL++LN V A+ L E++ R+
Sbjct: 63 SGMEVSSPVTILETPPVVVMGVRAYRKDTRGLKTLNDVMAKDLDEDLTRKI--------- 113
Query: 148 KAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVN 207
K Y+ + ++ QL++++ +RVL HT+ R G+ +KK ++E +
Sbjct: 114 ----TLPKDYDVEAKLDEMKEQLDEVED----IRVLLHTKPRLASGIPKKKPEIIECGIG 165
Query: 208 GGTIAEKVDYAYGFFEKQI-PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G ++ +K ++A K++ P D+ F E +D I VTKGKG++G V R+GV K
Sbjct: 166 GKSVEDKFEFARSLLGKEVNPADS-FSDGEHVDTIAVTKGKGFQGPVKRFGVRIQYGKAA 224
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
R R V IG W PAR +TVA AGQ GYH RTE NKK+ ++ Q
Sbjct: 225 RSSKARHVGSIGPWTPARTMWTVAMAGQMGYHKRTEFNKKILRIADESQ 273
>gi|347524198|ref|YP_004781768.1| 50S ribosomal protein L3 [Pyrolobus fumarii 1A]
gi|343461080|gb|AEM39516.1| ribosomal protein L3 [Pyrolobus fumarii 1A]
Length = 346
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 172/302 (56%), Gaps = 25/302 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M RK PR GSLG PRKRA+R K++++P+ KP L AFL YKAGMTH+
Sbjct: 1 MGARKKHAPRRGSLGLRPRKRASRLIPKIRSWPEVKSEKPLPL-AFLAYKAGMTHVFMID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPR-GLRSLNTVWAQHLSEEVRRRFY 139
++PGS KE VTI+E PPM+V+ V Y P GL +L WA+ E++ +++
Sbjct: 60 DRPGSTTEGKEIFVPVTILEAPPMVVLAVRVYGYDPNIGLYTLTEAWAR--PEDLVQQYN 117
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
+ + K F + + ++ K I+ L K+ VR++A TQ R + GL +KK
Sbjct: 118 LDIYRVLPKTF----RVPDPEQQLKKIEELLPKVYD----VRIIAATQPRLVGGLSKKKP 169
Query: 200 HLMEIQVNGGT-IAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
L+EI++ GG+ I E+ YA K V VFQ+ +++D+I VTKGKG++GV+ R+GV
Sbjct: 170 DLIEIKIGGGSGIEERFQYAASILGKTFTVRDVFQEGQLVDVIAVTKGKGFQGVIKRFGV 229
Query: 259 TRLPR--KTHRGLRKVAC----IGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG 312
LP+ K +G R++ IGA P V + GQ G+H RTE NK++ K+G G
Sbjct: 230 KELPKWHKHRKGSRRIGARSPGIGAISP------VPQPGQMGFHRRTEYNKRILKIGDNG 283
Query: 313 QE 314
E
Sbjct: 284 WE 285
>gi|448704116|ref|ZP_21700597.1| 50S ribosomal protein L3P [Halobiforma nitratireducens JCM 10879]
gi|445796505|gb|EMA47009.1| 50S ribosomal protein L3P [Halobiforma nitratireducens JCM 10879]
Length = 339
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 155/294 (52%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA+ + ++P D +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRASSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G+ + VW ++E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTPYGMNPVTEVWTDEFADELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y++D + ++ LE+ + VR + HT ++ + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDSDAAEDELRGLLEEGR--VDDVRAITHTVPSEVPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+ E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDFGLDLLENGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGNGADATVDG 284
>gi|410722182|ref|ZP_11361491.1| archaeal ribosomal protein L3 [Methanobacterium sp. Maddingley
MBC34]
gi|410597418|gb|EKQ52037.1| archaeal ribosomal protein L3 [Methanobacterium sp. Maddingley
MBC34]
Length = 336
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 160/289 (55%), Gaps = 25/289 (8%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFP-KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 86
PR GS+ F PRKRAAR ++ ++P +++P L F GYK GMTH+ + S
Sbjct: 6 QPRKGSVAFSPRKRAARESPRISSWPEREEPG----LLGFPGYKVGMTHVTQMDNTKNSP 61
Query: 87 LHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
E VT++ETPP++V+G+ Y +T RG++++ V A + E+++R+
Sbjct: 62 TEGMEISTPVTVVETPPIVVMGIRAYTQTSRGIKAMTDVLAAEMDEDLKRKI-------- 113
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
+Y+++ S++ +++++ + +R L HT+ R M + +KK L+E +
Sbjct: 114 -----SIPVEYDSEAQLASLKEKMDQVVE----IRALIHTKPR-MASVPKKKPELLECGI 163
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G ++ +K++YA K+I VF E D I VTKGKG++GV+ RWGV K
Sbjct: 164 GGNSVEDKLEYAASVLGKEINPADVFADGEHTDAIAVTKGKGFQGVIKRWGVRIQYGKAA 223
Query: 267 RGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
R R V IG W PAR +TV AGQ GYH RTE NKK+ K+G+ Q
Sbjct: 224 RSSKGRHVGSIGPWSPARTMWTVPMAGQMGYHQRTEYNKKILKIGEAEQ 272
>gi|150399607|ref|YP_001323374.1| 50S ribosomal protein L3P [Methanococcus vannielii SB]
gi|9910844|sp|Q9UWG2.1|RL3_METVA RecName: Full=50S ribosomal protein L3P
gi|166233160|sp|A6UQJ0.1|RL3_METVS RecName: Full=50S ribosomal protein L3P
gi|150012310|gb|ABR54762.1| ribosomal protein L3 [Methanococcus vannielii SB]
Length = 334
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 164/292 (56%), Gaps = 24/292 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPK 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S + +E VT++ETP + V G+ Y KT +GL++L VWA+ +E+ R+
Sbjct: 61 SPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGRKL------ 114
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
TK ++ +T E S+ A LEK +RV+ HT K G+ +KK ++EI
Sbjct: 115 ----TVTK-KEEIKTVE---SLDAVLEKTVD----LRVIVHTN-PKTTGIPKKKPEVVEI 161
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
+V G ++AEK+ YA K + ++ VF+ E ID + VTKGKG++G V RWGV + +
Sbjct: 162 RVGGSSVAEKLAYAKDILGKTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGK 221
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R+ IG W P RV +TV AGQ G+H RTE NK++ KLG G E
Sbjct: 222 HQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE 273
>gi|154343493|ref|XP_001567692.1| putative ribosomal protein L3, partial [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065024|emb|CAM43136.1| putative ribosomal protein L3, partial [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 131
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 107/131 (81%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE E VTI+E PPM+VVG+VGY +TP GL+++ TVWA H S E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGLKTMGTVWAHHTSVEFRRRYYK 120
Query: 141 NWCKSKKKAFT 151
NW +S + AF+
Sbjct: 121 NWKQSAQLAFS 131
>gi|389853117|ref|YP_006355351.1| 50S ribosomal protein L3 [Pyrococcus sp. ST04]
gi|388250423|gb|AFK23276.1| rplC, large subunit ribosomal protein L3 [Pyrococcus sp. ST04]
Length = 361
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 167/307 (54%), Gaps = 26/307 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSLGF PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KIHRPRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHL---------SEEVR 135
+ KE VTIIETPP+ V G+ Y + GL + V +++V
Sbjct: 60 LT-NGKEIFVPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFKLDNYPVKPNKKVE 118
Query: 136 RRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVV--RVLAHTQ--IRKM 191
FYK ++ K Y ++ ++ + QLE + K +V R L TQ I K+
Sbjct: 119 MTFYKLL----RRRIATLPKDYTQEQFEQKL-GQLEDMIKEGEIVEVRALVSTQPWIIKL 173
Query: 192 KGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEG 251
K KK +ME + G ++ EK +Y K++ VD V ++ E++D+I VTKGKG +G
Sbjct: 174 K----KKPEVMEYAIGGTSVEEKFNYIKERLGKELRVDEVLKEGELLDVIAVTKGKGTQG 229
Query: 252 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G
Sbjct: 230 PVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGHN 289
Query: 312 GQESHTG 318
G+ G
Sbjct: 290 GKLELNG 296
>gi|448611747|ref|ZP_21662177.1| 50S ribosomal protein L3P [Haloferax mucosum ATCC BAA-1512]
gi|445742508|gb|ELZ94002.1| 50S ribosomal protein L3P [Haloferax mucosum ATCC BAA-1512]
Length = 338
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 160/297 (53%), Gaps = 27/297 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF---YKNWCKS 145
E VT++ETPPM V + Y +TP G++ VWA +E+ R ++ +S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPKTEVWASEFHDELDRVLDLPAEDTFES 124
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
A + + E D+ +RV+ HT ++K + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPSELKNVPKKKPDVMETR 166
Query: 206 VNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
V GG++ E+ D+A + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 264 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+G + S G
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEASVEG 283
>gi|289191591|ref|YP_003457532.1| 50S ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
gi|288938041|gb|ADC68796.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
Length = 335
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 162/292 (55%), Gaps = 25/292 (8%)
Query: 26 FEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 85
PR GSL F PRKRA R +++++P+++ RL AF YKAGM+H + P S
Sbjct: 5 INRPRRGSLAFSPRKRAKRPVPRIRSWPEEET---VRLQAFPVYKAGMSHAFIKEDNPKS 61
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRSLNTVWAQHLSEEVRRRFYKNWCK 144
+E +TI+E PP+ V + Y + R L +L VWA +L +E+ R+ K
Sbjct: 62 PNAGQEIFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI-----K 116
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
KK E +K+++ LE +K VRVL HT K+ L +KK ++EI
Sbjct: 117 LPKK------------EDRKTVE-DLEALKDKIEDVRVLVHTN-PKLTCLPKKKPEILEI 162
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
++ G I E+++YA KQ+ + VFQ+ E++D IGVTKGKG++G V RWGV + +
Sbjct: 163 RIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGK 222
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R V IG W P V ++V GQ GYH RTE NK++ K+G G E
Sbjct: 223 HARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE 274
>gi|330508498|ref|YP_004384926.1| 50S ribosomal protein L3 [Methanosaeta concilii GP6]
gi|328929306|gb|AEB69108.1| ribosomal protein L3 [Methanosaeta concilii GP6]
Length = 334
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 155/288 (53%), Gaps = 23/288 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL + PRKRA +++++ ++D R+ F GYKAGMTH++ ++P S
Sbjct: 7 PRRGSLAYSPRKRAKSEVPRIRSWLEEDK---ARIAGFAGYKAGMTHVMMIDDRPRSLTE 63
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++E PPM VV V Y GLR +WA++LS E+ R
Sbjct: 64 GMEISTPVTVLEVPPMNVVAVRAYESYNGGLRPAGELWAENLSPELSR------------ 111
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
A T K T G L + + VRVL HT + G+ +K +ME+ +NG
Sbjct: 112 AMTVPKKTRGTAPG------DLVALGDDIADVRVLVHTNPTLVSGIPKKVPEIMEMPING 165
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
G++ +++ +A +Q+P+ +VF+ +++D VTKGKG +G V RWG+ RK R
Sbjct: 166 GSMNDRLSFAQTLLGQQVPISSVFELGDLMDTSAVTKGKGTQGPVRRWGIAMAKRKHART 225
Query: 269 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+R V +G WHPA +S+ V + GQ GYH RTE NK++ +G G +
Sbjct: 226 GKVRHVGNLGPWHPAHISWRVPQLGQMGYHQRTEYNKRLMFIGTDGSK 273
>gi|448338134|ref|ZP_21527186.1| 50S ribosomal protein L3P [Natrinema pallidum DSM 3751]
gi|445623309|gb|ELY76731.1| 50S ribosomal protein L3P [Natrinema pallidum DSM 3751]
Length = 339
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 154/294 (52%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR+RA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G++ + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+Y+TD ++ E+ + VRV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDEYDTDAATDELRGLQEEGR--VDDVRVITHTVPGDVPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ ++VD+A E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVGDRVDFALEIIEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|448302866|ref|ZP_21492816.1| 50S ribosomal protein L3P [Natronorubrum sulfidifaciens JCM 14089]
gi|445593873|gb|ELY48040.1| 50S ribosomal protein L3P [Natronorubrum sulfidifaciens JCM 14089]
Length = 339
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 155/294 (52%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR+RA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G++ L VW + E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRVYEDTPYGMKPLTEVWTDEFAPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+ D ++ LE+ + VRV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDVDAATDELRGYLEEGR--VDDVRVITHTVPGEIPSMPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+A E + ++ +F+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSLDERVDFALETVEDGGEHVMNDMFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|448362304|ref|ZP_21550915.1| 50S ribosomal protein L3P [Natrialba asiatica DSM 12278]
gi|445648825|gb|ELZ01773.1| 50S ribosomal protein L3P [Natrialba asiatica DSM 12278]
Length = 340
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 152/295 (51%), Gaps = 21/295 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+TD ++ LE+ + VRV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDTDASADELRGFLEEGR--VDDVRVITHTVPGDIPSMPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK---QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
++ ++VDYA E + ++ +F+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 SSVEDRVDYALELLEDGGGEHVMNDMFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKH 230
Query: 266 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 285
>gi|324528901|gb|ADY48966.1| 60S ribosomal protein L3, partial [Ascaris suum]
Length = 222
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 101/125 (80%), Gaps = 3/125 (2%)
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+ EKVD+A EKQ+ VD+VF +DEMID IGVTKGKG++GV +RW +L
Sbjct: 1 MEIQVNGGTVPEKVDWAKEHLEKQVAVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKL 60
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG---QESHTG 318
PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y+LGK + G
Sbjct: 61 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKRNG 120
Query: 319 ITEFD 323
TE+D
Sbjct: 121 GTEYD 125
>gi|288931510|ref|YP_003435570.1| 50S ribosomal protein L3 [Ferroglobus placidus DSM 10642]
gi|288893758|gb|ADC65295.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642]
Length = 329
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 165/295 (55%), Gaps = 33/295 (11%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPK-DDPSKPCRLTAFLGYKAGMTHIVRDVEKP 83
K+ PR GSLGF PRKRA+ +++++P D+P RL F GYKAGMTH++ ++
Sbjct: 2 KYHRPRRGSLGFSPRKRASSIIPRIRSWPDCDEP----RLLGFAGYKAGMTHVIMIDDRK 57
Query: 84 GSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWC 143
S + +E VT++ETPPM V+G+ Y KT GL+ VW + + RR
Sbjct: 58 NSPTYGEEIMVPVTVLETPPMKVMGIRVYRKTVYGLQIAGEVWTDEVDSYLSRRLQ---- 113
Query: 144 KSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASV--VRVLAHTQIRKMKGLKQKKAHL 201
KKK ++K+K+ + VRV+ +TQ + G+ +K +
Sbjct: 114 IPKKK-------------------GDVDKLKEIDDIAEVRVITYTQPYLITGVPKKVPDV 154
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
ME +V GG + ++YA K++ V+ VF++ ID++ +TKGKG++G V RWGV L
Sbjct: 155 MEQKV-GGDVEAALNYAIEKLGKEVRVNEVFKEGAFIDVLSITKGKGFQGPVKRWGVITL 213
Query: 262 PRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
K R R+V +G WHP RV +TV +AGQ G+H RTE NK++ K+G G++
Sbjct: 214 DAKHARSSKHRRVGTLGPWHPHRVRWTVPQAGQMGFHQRTEYNKRILKIGTNGED 268
>gi|448345585|ref|ZP_21534474.1| 50S ribosomal protein L3P [Natrinema altunense JCM 12890]
gi|445633518|gb|ELY86705.1| 50S ribosomal protein L3P [Natrinema altunense JCM 12890]
Length = 339
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 154/294 (52%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR+RA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G++ + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+Y+TD ++ E+ + VRV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDEYDTDAATDELRGLQEEGR--VDDVRVITHTVPGDVPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ ++VD+A E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDDRVDFALEIIEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|242398279|ref|YP_002993703.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739]
gi|259709744|sp|C6A159.1|RL3_THESM RecName: Full=50S ribosomal protein L3P
gi|242264672|gb|ACS89354.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739]
Length = 359
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 162/305 (53%), Gaps = 24/305 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
+ PR GSL + PRKRA +++ +P++ + R+ F GYKAGMTH++ + PG
Sbjct: 3 RISRPRRGSLAYSPRKRAKSIVPRIRKWPQE---QEVRMLGFAGYKAGMTHVLMIDDAPG 59
Query: 85 SKLHK-KETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWC 143
L K KE VTI+E PP+MV G+ Y + GL + V E N+
Sbjct: 60 --LTKGKEIFVPVTIVEAPPLMVYGIRAYKRGYFGLETATEVIVPDFKLE-------NYP 110
Query: 144 KSKKKAFTKY----------SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG 193
+ K T Y K Y T+E + +LE + K VV + A +
Sbjct: 111 SKRAKNVTFYKLLERRIKTLPKNY-TEEVFQQKLGELEDLVKTGEVVELRALVATQPWLA 169
Query: 194 LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVV 253
+KK +ME V G +I EK +Y K+I V + Q+ E++DI+ VTKGKG +G V
Sbjct: 170 RIKKKPEVMEYAVGGTSIEEKFNYIKEKLGKEIRVGEILQEGELLDIVAVTKGKGTQGPV 229
Query: 254 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
RWGV K +G RKVA IG WHPARV +TV RAGQ G+HHRTE NK++ ++G+ G+
Sbjct: 230 KRWGVKLTSHKDSKGRRKVATIGPWHPARVMWTVPRAGQMGFHHRTEFNKRLLRIGENGK 289
Query: 314 ESHTG 318
+ G
Sbjct: 290 LTLNG 294
>gi|448392361|ref|ZP_21567135.1| 50S ribosomal protein L3P [Haloterrigena salina JCM 13891]
gi|445664451|gb|ELZ17160.1| 50S ribosomal protein L3P [Haloterrigena salina JCM 13891]
Length = 339
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 156/294 (53%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y +TP G++ + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEETPYGMKPVTEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+TD + ++ LE+ + VRV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDIPGDDYDTDAAEDELRGLLEQGR--VDDVRVITHTVPSEIPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ ++VD+A + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEDRVDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|150402715|ref|YP_001330009.1| 50S ribosomal protein L3P [Methanococcus maripaludis C7]
gi|166233157|sp|A6VHD2.1|RL3_METM7 RecName: Full=50S ribosomal protein L3P
gi|150033745|gb|ABR65858.1| ribosomal protein L3 [Methanococcus maripaludis C7]
Length = 334
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 161/292 (55%), Gaps = 24/292 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKSRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S + +E VT++ETP + V G+ Y KT +GL++L VWA+ L ++ R+ +
Sbjct: 61 SPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDNDLGRKLTLVKKE 120
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
KK A ++ A LEK A+ VRV+ HT K G+ +KK ++EI
Sbjct: 121 EKKTA--------------DALDAVLEK----ATEVRVIVHTN-PKTTGIPKKKPEVVEI 161
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
++ G ++AE++ YA K + + VF+ E+ID + +TKGKG++G V RWG+ + +
Sbjct: 162 RIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGK 221
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R IG W P RV +TV GQ G+H RTE NK++ KLG G E
Sbjct: 222 HQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273
>gi|448309694|ref|ZP_21499550.1| 50S ribosomal protein L3P [Natronorubrum bangense JCM 10635]
gi|445589551|gb|ELY43781.1| 50S ribosomal protein L3P [Natronorubrum bangense JCM 10635]
Length = 339
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 154/294 (52%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR+RA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G++ L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRVYEDTPYGMKPLTEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+ D ++ LE+ + VRV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDVDAATDELRGYLEEGR--IDDVRVITHTVPGEVPSMPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G+I E+VD+A E + ++ +F+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSIEERVDFALETVEDGGEHVMNDMFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|448350181|ref|ZP_21539000.1| 50S ribosomal protein L3P [Natrialba taiwanensis DSM 12281]
gi|445637688|gb|ELY90836.1| 50S ribosomal protein L3P [Natrialba taiwanensis DSM 12281]
Length = 340
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 151/295 (51%), Gaps = 21/295 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+TD ++ LE+ + VRV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDTDASADELRGFLEEGR--VDDVRVITHTVPGDIPSMPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK---QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
++ ++VDY E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 SSVEDRVDYTLELLEDGGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKH 230
Query: 266 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 285
>gi|284165492|ref|YP_003403771.1| 50S ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
gi|284015147|gb|ADB61098.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
Length = 339
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 156/294 (53%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y +TP G++ + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEETPYGMKPVTEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+TD + ++ LE+ + VRV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDIPGDDYDTDAAEDELRGLLEQGR--VDDVRVITHTVPSEIPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ +++D+A + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEDRIDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|397773843|ref|YP_006541389.1| ribosomal protein L3 [Natrinema sp. J7-2]
gi|448341390|ref|ZP_21530351.1| 50S ribosomal protein L3P [Natrinema gari JCM 14663]
gi|397682936|gb|AFO57313.1| ribosomal protein L3 [Natrinema sp. J7-2]
gi|445628072|gb|ELY81383.1| 50S ribosomal protein L3P [Natrinema gari JCM 14663]
Length = 339
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 155/294 (52%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR+RA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G++ + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+Y+TD ++ E+ + VRV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDEYDTDAATDELRGLQEEGR--VDDVRVITHTVPGDVPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ ++VD+A E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDDRVDFALETIEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGEGADATVDG 284
>gi|340624855|ref|YP_004743308.1| 50S ribosomal protein L3P [Methanococcus maripaludis X1]
gi|339905123|gb|AEK20565.1| 50S ribosomal protein L3P [Methanococcus maripaludis X1]
Length = 334
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 162/292 (55%), Gaps = 24/292 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S +E VT++ETP + V G+ Y KT +GL++L VWA+ L ++ R+
Sbjct: 61 SPNSSQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDSDLGRKL----TL 116
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
+KK E KK++ A L+ + + A+ VR + HT K G+ +KK ++EI
Sbjct: 117 AKK-------------EEKKTVDA-LDAVLEKATEVRAIVHTN-PKTTGIPKKKPEVVEI 161
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
+V G ++AE++ YA K + + VF+ E+ID + +TKGKG++G V RWG+ + +
Sbjct: 162 RVGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGK 221
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R IG W P RV +TV GQ G+H RTE NK++ KLG G E
Sbjct: 222 HQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273
>gi|448671480|ref|ZP_21687419.1| 50S ribosomal protein L3P [Haloarcula amylolytica JCM 13557]
gi|445766083|gb|EMA17220.1| 50S ribosomal protein L3P [Haloarcula amylolytica JCM 13557]
Length = 338
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 156/294 (53%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKR+ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETPPM V + Y TP G R L VW E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D ++ ++ LE VR++ HT + + +KK +ME +V G
Sbjct: 115 ---DVPEDHDPDAAEEQVRDALEAGD--LGDVRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDLVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + + G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDGDEPTVDG 283
>gi|45359106|ref|NP_988663.1| 50S ribosomal protein L3P [Methanococcus maripaludis S2]
gi|74553576|sp|Q6LX10.1|RL3_METMP RecName: Full=50S ribosomal protein L3P
gi|45047981|emb|CAF31099.1| LSU Ribosomal protein L3P [Methanococcus maripaludis S2]
Length = 334
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 162/292 (55%), Gaps = 24/292 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S +E VT++ETP + V G+ Y KT +GL++L VWA+ L ++ R+
Sbjct: 61 SPNSSQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDSDLGRKL----TL 116
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
+KK E KK++ A L+ + + A+ VR + HT K G+ +KK ++EI
Sbjct: 117 AKK-------------EEKKTVDA-LDAVLEKATEVRAIVHTN-PKTTGIPKKKPEVVEI 161
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
++ G ++AE++ YA K + + VF+ E+ID + +TKGKG++G V RWG+ + +
Sbjct: 162 RIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGK 221
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R IG W P RV +TV GQ G+H RTE NK++ KLG G E
Sbjct: 222 HQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273
>gi|432102535|gb|ELK30106.1| 60S ribosomal protein L3-like protein [Myotis davidii]
Length = 227
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 102/122 (83%)
Query: 190 KMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGY 249
K+ +QKKAH+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G
Sbjct: 2 KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGI 61
Query: 250 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G
Sbjct: 62 KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIG 121
Query: 310 KG 311
+G
Sbjct: 122 RG 123
>gi|409096184|ref|ZP_11216208.1| 50S ribosomal protein L3P [Thermococcus zilligii AN1]
Length = 346
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 161/294 (54%), Gaps = 23/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL + PRKRA K++ +P+D R+ F GYKAGMTHI+ + PG
Sbjct: 7 PRRGSLAYSPRKRARSIVPKIRNWPEDSE---VRMLGFAGYKAGMTHILMIDDNPGLT-K 62
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
KE VTI+E PP+ V G+ Y + GL + VW L++ VRRR K+ K
Sbjct: 63 GKEIFAPVTIVEVPPLFVYGIRAYRQGYLGLETATEVWFHKLNDHVRRR-----IKTLPK 117
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVV--RVLAHTQIRKMKGLKQKKAHLMEIQV 206
++ +E ++ QLE + VV R+L HTQ + GLK KK +ME +
Sbjct: 118 DYS--------EEAFQARLGQLEDLVNEGEVVDVRLLVHTQ-PWLIGLK-KKPEVMEYAI 167
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G IA K +YA ++I V + E++D++ VTKGKG +G V RWGV K
Sbjct: 168 GGNDIAAKFEYAKERIGREIRASEVLHEGELLDVVAVTKGKGTQGPVKRWGVKIQFHKAQ 227
Query: 267 RGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R V +G WHPARV +TV +AGQ G+HHRTE+NK++ +G+ G+ + G
Sbjct: 228 RAGKGRHVGNLGPWHPARVMWTVPQAGQTGFHHRTELNKRLIAIGENGKLNLDG 281
>gi|14591535|ref|NP_143617.1| 50S ribosomal protein L3P [Pyrococcus horikoshii OT3]
gi|6094075|sp|O59418.1|RL3_PYRHO RecName: Full=50S ribosomal protein L3P
gi|3258212|dbj|BAA30895.1| 362aa long hypothetical 50S ribosomal protein L3 [Pyrococcus
horikoshii OT3]
Length = 362
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 165/303 (54%), Gaps = 27/303 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KIHRPRKGSLAFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
+ KE VTIIETPP+ V G+ Y + GL + V + N+
Sbjct: 60 LT-NGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETAGEVIVPDFELD-------NYTP 111
Query: 145 SKK---KAFTKYS----------KQYETDEGKKSIQAQLEKIKKYASV-VRVLAHTQIRK 190
SKK + FT Y K Y +E ++ + A + IK+ V VR L TQ
Sbjct: 112 SKKGKGRKFTFYQFLGRRIATLPKDYTQEEFEQKLGALEDMIKEGEIVEVRALVSTQPWV 171
Query: 191 MKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYE 250
+K +KK +ME + G ++ EK +Y K+I V V ++ E++D+I VTKGKG +
Sbjct: 172 IK--LKKKPEVMEYAIGGTSVEEKFNYIKEKLGKEIRVGEVLKEGELLDVIAVTKGKGTQ 229
Query: 251 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
G V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+
Sbjct: 230 GPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE 289
Query: 311 GGQ 313
G+
Sbjct: 290 NGK 292
>gi|3642669|gb|AAC36524.1| ribosomal protein L3, partial [Mus musculus]
Length = 117
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/108 (74%), Positives = 97/108 (89%)
Query: 204 IQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
IQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +LPR
Sbjct: 1 IQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPR 60
Query: 264 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
KTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 61 KTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 108
>gi|448606195|ref|ZP_21658774.1| 50S ribosomal protein L3P [Haloferax sulfurifontis ATCC BAA-897]
gi|448623080|ref|ZP_21669729.1| 50S ribosomal protein L3P [Haloferax denitrificans ATCC 35960]
gi|445739612|gb|ELZ91119.1| 50S ribosomal protein L3P [Haloferax sulfurifontis ATCC BAA-897]
gi|445753588|gb|EMA05005.1| 50S ribosomal protein L3P [Haloferax denitrificans ATCC 35960]
Length = 338
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 157/297 (52%), Gaps = 27/297 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF---YKNWCKS 145
E VT++ETPPM V + Y +TP G++ VWA +E+ R ++ S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWAGEFHDELDRVLDLPAEDTFDS 124
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
A + + E D+ +RV+ HT ++ + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPSELANVPKKKPDVMETR 166
Query: 206 VNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
V GG++ E+ D+A + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 264 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+G S G
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDASVDG 283
>gi|444706378|gb|ELW47720.1| 60S ribosomal protein L3 [Tupaia chinensis]
Length = 197
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/152 (55%), Positives = 115/152 (75%), Gaps = 2/152 (1%)
Query: 102 PPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDE 161
PP +V+G+VG+V+TPRGLR+ T+ A+ +S+E +R FYKNW KSKK AFTKY K ++ D
Sbjct: 2 PPTVVMGIVGHVETPRGLRTFRTLLAERISDECKRFFYKNWHKSKK-AFTKYCKNWQDDN 60
Query: 162 GKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGF 221
GKK ++ +K Y V+R++AHTQ+R + L QKKAHLMEIQVNGGT+AEK+D+
Sbjct: 61 GKKQVEKDFSSMKMYCQVIRIIAHTQMRLLP-LCQKKAHLMEIQVNGGTVAEKLDWVLEQ 119
Query: 222 FEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVV 253
E+++PV+ VF +DEMID +GV KGKGY G +
Sbjct: 120 LEQRVPVNQVFGQDEMIDAMGVIKGKGYRGTI 151
>gi|433420037|ref|ZP_20405423.1| 50S ribosomal protein L3P [Haloferax sp. BAB2207]
gi|448545986|ref|ZP_21626313.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-646]
gi|448548060|ref|ZP_21627404.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-645]
gi|448557083|ref|ZP_21632518.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-644]
gi|448569070|ref|ZP_21638482.1| 50S ribosomal protein L3P [Haloferax lucentense DSM 14919]
gi|448600511|ref|ZP_21656007.1| 50S ribosomal protein L3P [Haloferax alexandrinus JCM 10717]
gi|432199294|gb|ELK55485.1| 50S ribosomal protein L3P [Haloferax sp. BAB2207]
gi|445703332|gb|ELZ55263.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-646]
gi|445714762|gb|ELZ66520.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-645]
gi|445714952|gb|ELZ66709.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-644]
gi|445725220|gb|ELZ76845.1| 50S ribosomal protein L3P [Haloferax lucentense DSM 14919]
gi|445735228|gb|ELZ86780.1| 50S ribosomal protein L3P [Haloferax alexandrinus JCM 10717]
Length = 338
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 157/297 (52%), Gaps = 27/297 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF---YKNWCKS 145
E VT++ETPPM V + Y +TP G++ VWA +E+ R ++ S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWAGEFHDELDRVLDLPAEDTFDS 124
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
A + + E D+ +RV+ HT ++ + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPSELANVPKKKPDVMETR 166
Query: 206 VNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
V GG++ E+ D+A + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 264 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+G S G
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDASVEG 283
>gi|313125790|ref|YP_004036060.1| 50S ribosomal protein L3 [Halogeometricum borinquense DSM 11551]
gi|448285629|ref|ZP_21476870.1| 50S ribosomal protein L3P [Halogeometricum borinquense DSM 11551]
gi|312292155|gb|ADQ66615.1| LSU ribosomal protein L3P [Halogeometricum borinquense DSM 11551]
gi|445576265|gb|ELY30722.1| 50S ribosomal protein L3P [Halogeometricum borinquense DSM 11551]
Length = 338
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 157/294 (53%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+ + PR+RAA+ +++++P DD S L F GYKAGMT ++ ++ S
Sbjct: 7 PRKGSMAYSPRQRAAKEVPRIRSWPDDDGS--PGLQGFAGYKAGMTQVMMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V V Y TP G + L VWA E + R
Sbjct: 65 GMEEAVPVTVVETPPMRAVAVRAYEDTPYGAKPLTEVWASEFVENLDRTL---------D 115
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
++ + + + D+ + +++A +RV+ HT MK + +KK +ME +V G
Sbjct: 116 LPSEDTFEEDADDLRAAVEA------GEVDDIRVITHTVPASMKNIPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+ D+A E+ + + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 170 GSLQERSDFALDLVEEGGEHSMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG G + G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGDGDDATVDG 283
>gi|322372168|ref|ZP_08046709.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
gi|320548177|gb|EFW89850.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
Length = 338
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 154/294 (52%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P D +P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDSD-GQPS-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + + VW +E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPMTEVWGSEFHDELDRTL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D + ++A +E + +RV+ HT +K + +K+ +ME +V G
Sbjct: 115 ---NVPENHDADAAEDELRAAIEAGD--VADLRVITHTVPSDLKNVPKKRPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G+I+++ D+A E + + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 170 GSISDRADFALELLEDGGEHDITDVFRAGEYLDTSGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG + S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLISLGDDDEASVDG 283
>gi|341582063|ref|YP_004762555.1| 50S ribosomal protein L3P [Thermococcus sp. 4557]
gi|340809721|gb|AEK72878.1| 50S ribosomal protein L3P [Thermococcus sp. 4557]
Length = 347
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 156/292 (53%), Gaps = 23/292 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL + PRKRA ++K +PKD R+ F GYKAGMTH++ ++PG
Sbjct: 3 KIHRPRRGSLAYSPRKRARSIVPRIKKWPKDSE---VRMLGFAGYKAGMTHVLMIDDRPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
KE VTI+E PP+ V G+ Y + GL + VW L++ V+RR
Sbjct: 60 LT-KGKEIFMPVTIVEVPPLFVYGIRAYRQGYLGLETATEVWFHELNDHVKRRI------ 112
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVV--RVLAHTQIRKMKGLKQKKAHLM 202
K Y+ +E K+ AQLE++ + +V R+L HTQ +K +KK +M
Sbjct: 113 ------KTLPKNYD-EEAFKAKLAQLEELIESGEIVDVRLLVHTQPWLIK--LKKKPEVM 163
Query: 203 EIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 262
E + G + K DYA K++ V + E++DII VTKGKG +G V RWGV
Sbjct: 164 EYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDIIAVTKGKGTQGPVKRWGVKIQF 223
Query: 263 RKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG 312
K R R + +G WHP RV +TV AGQ G+HHRTE NK++ +G+ G
Sbjct: 224 HKAQRAGKARHIGNLGPWHPTRVMWTVPLAGQMGFHHRTEFNKRLIAIGENG 275
>gi|76803057|ref|YP_331152.1| 50S ribosomal protein L3P [Natronomonas pharaonis DSM 2160]
gi|109893528|sp|Q3IMY8.1|RL3_NATPD RecName: Full=50S ribosomal protein L3P
gi|76558922|emb|CAI50518.1| 50S ribosomal protein L3 [Natronomonas pharaonis DSM 2160]
Length = 336
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 154/298 (51%), Gaps = 22/298 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PR RAA + ++P DD +P L F GYKAGM+H+V ++P S
Sbjct: 7 PRKGSMGFSPRSRAASEVPRFNSWP-DDEGQPG-LQGFAGYKAGMSHVVAINDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
+E VT++ETPPM V V Y TP G R L VW + E++ R ++
Sbjct: 65 GQEETVPVTVVETPPMRAVAVRAYEDTPYGKRPLTEVWTDEVHEDLERSLS---VPEEQS 121
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ + DEG + VRV+ HT + + +K+ +ME +V G
Sbjct: 122 GDIEGDIRTALDEGA-------------LADVRVITHTVPGALSSVPKKEPDVMETRVGG 168
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G+++++VD+A + + V VF+ E D+ G+TKGKG +G V RWGV + K
Sbjct: 169 GSLSDRVDFALDLVDDGGEHTVTDVFRAGEYTDVAGITKGKGTQGPVKRWGVQKRKGKHA 228
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEF 322
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG G +
Sbjct: 229 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDLGDDDVSPDGGFVNY 286
>gi|315229856|ref|YP_004070292.1| 50S ribosomal protein L3e (L3p) [Thermococcus barophilus MP]
gi|315182884|gb|ADT83069.1| LSU ribosomal protein L3e (L3p) [Thermococcus barophilus MP]
Length = 346
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 162/292 (55%), Gaps = 23/292 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL + PRKRA +++ +P+++ RL F GYKAGMTHI+ ++PG
Sbjct: 3 KISKPRRGSLAYSPRKRAKSIVPRIRKWPQEEE---VRLLGFAGYKAGMTHILMIDDRPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
KE VTI+ETPPM+V G+ Y + GL + VW +L+ +++RR K
Sbjct: 60 LT-KGKEIFMPVTIVETPPMVVFGIRAYKQGYLGLETATEVWIPNLNPDLKRR-----IK 113
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVV--RVLAHTQIRKMKGLKQKKAHLM 202
+ K + + + Q + E LE + K +V R L HTQ R +K +KK +M
Sbjct: 114 TLPKNYDEGAFQQKLGE--------LEDLVKSGEIVEVRALVHTQPRLIK--LKKKPEVM 163
Query: 203 EIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 262
E V G ++ +K Y K+I V ++ E++D+I VTKGKG +G V RWG+
Sbjct: 164 EYAVGGKSVEDKFAYLKEKLGKEIRAKEVLKEGELLDVIAVTKGKGTQGPVKRWGIKIQF 223
Query: 263 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG 312
K R R V +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ G
Sbjct: 224 HKAQRAGKGRHVGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENG 275
>gi|15678033|ref|NP_275147.1| 50S ribosomal protein L3P [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3122720|sp|O26110.1|RL3_METTH RecName: Full=50S ribosomal protein L3P
gi|2621048|gb|AAB84521.1| ribosomal protein L3 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 337
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 154/289 (53%), Gaps = 24/289 (8%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPK-DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 86
PR GS+ F PRKRAAR +VK++P+ D+P L A GYKAGMTH++ + S
Sbjct: 6 QPRKGSVAFSPRKRAARETPRVKSWPQVDEPG----LLALAGYKAGMTHVMMVDNQKNSP 61
Query: 87 LHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
E VTI+E PP+ V+ V Y KT RGL++L V A +++RR+
Sbjct: 62 TEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKTLGEVLATETKDDLRRK--------- 112
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
T + Y+ + + I++ +E Y + VRV+ HT R + + +KK + E +
Sbjct: 113 ---LTPPADDYDQEAAIEKIRSNME----YVADVRVIVHTNPR-LASVPKKKPEVFECGL 164
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G T EK +YA K + +F + +D I VTKGKG++G V RWG+ K
Sbjct: 165 GGKTPEEKFEYALEILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGKAA 224
Query: 267 RGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
R R + +G W P+R +TV +AGQ GYH RTE NK++ K+G +
Sbjct: 225 RSSKGRHIGSLGPWTPSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASE 273
>gi|448565515|ref|ZP_21636382.1| 50S ribosomal protein L3P [Haloferax prahovense DSM 18310]
gi|448583470|ref|ZP_21646826.1| 50S ribosomal protein L3P [Haloferax gibbonsii ATCC 33959]
gi|445715259|gb|ELZ67015.1| 50S ribosomal protein L3P [Haloferax prahovense DSM 18310]
gi|445729699|gb|ELZ81294.1| 50S ribosomal protein L3P [Haloferax gibbonsii ATCC 33959]
Length = 338
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 156/297 (52%), Gaps = 27/297 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKR + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRVTKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF---YKNWCKS 145
E VT++ETPPM V + Y +TP G++ VW +E+ R +N S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWTDEFHDELDRVLDLPAENTFDS 124
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
A + + E D+ +RV+ HT ++ + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPAELANVPKKKPDVMETR 166
Query: 206 VNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
V GG++ E+ D+A + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 264 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+G + S G
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEASVEG 283
>gi|292656685|ref|YP_003536582.1| 50S ribosomal protein L3 [Haloferax volcanii DS2]
gi|448290689|ref|ZP_21481835.1| 50S ribosomal protein L3P [Haloferax volcanii DS2]
gi|291372463|gb|ADE04690.1| ribosomal protein L3 [Haloferax volcanii DS2]
gi|445578060|gb|ELY32475.1| 50S ribosomal protein L3P [Haloferax volcanii DS2]
Length = 338
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 157/297 (52%), Gaps = 27/297 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPHE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF---YKNWCKS 145
E VT++ETPPM V + Y +TP G++ VWA +E+ R ++ S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWAGEFHDELDRVLDLPAEDTFDS 124
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
A + + E D+ +RV+ HT ++ + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPSELANVPKKKPDVMETR 166
Query: 206 VNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
V GG++ E+ D+A + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 264 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+G S G
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDASVEG 283
>gi|159905511|ref|YP_001549173.1| 50S ribosomal protein L3P [Methanococcus maripaludis C6]
gi|226730533|sp|A9A9B8.1|RL3_METM6 RecName: Full=50S ribosomal protein L3P
gi|159887004|gb|ABX01941.1| ribosomal protein L3 [Methanococcus maripaludis C6]
Length = 334
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 160/292 (54%), Gaps = 24/292 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKSRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S + +E VT++ETP + V G+ Y KT +GL++L VWA+ L ++ R+ +
Sbjct: 61 SPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLQALTEVWAEQLDGDLGRKLTLVKKE 120
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
KK A ++ A LEK A+ VR + HT K G+ +KK ++EI
Sbjct: 121 EKKTA--------------DALDAVLEK----ATEVRAIVHTN-PKTTGIPKKKPEVVEI 161
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
++ G ++AE++ YA K + + VF+ E+ID + +TKGKG++G V RWG+ + +
Sbjct: 162 RIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGK 221
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R IG W P RV +TV GQ G+H RTE NK++ KLG G E
Sbjct: 222 HQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273
>gi|13384820|ref|NP_079701.1| ribosomal protein L3-like isoform 2 [Mus musculus]
gi|12832343|dbj|BAB22066.1| unnamed protein product [Mus musculus]
gi|12835407|dbj|BAB23247.1| unnamed protein product [Mus musculus]
gi|148690417|gb|EDL22364.1| ribosomal protein L3-like [Mus musculus]
gi|148877901|gb|AAI45877.1| Ribosomal protein L3-like [Mus musculus]
gi|148877992|gb|AAI45879.1| Ribosomal protein L3-like [Mus musculus]
Length = 240
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 101/122 (82%)
Query: 190 KMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGY 249
K+ +QKKAH+MEIQ+NGGT+AEKV + EKQ+PV +VF + E+ID+I VTKG+G
Sbjct: 2 KLLPFRQKKAHIMEIQLNGGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGV 61
Query: 250 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G
Sbjct: 62 KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIG 121
Query: 310 KG 311
+G
Sbjct: 122 RG 123
>gi|374635578|ref|ZP_09707174.1| ribosomal protein L3 [Methanotorris formicicus Mc-S-70]
gi|373561880|gb|EHP88105.1| ribosomal protein L3 [Methanotorris formicicus Mc-S-70]
Length = 335
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 157/292 (53%), Gaps = 23/292 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA R +++++P++D RL AF YKAGM+H + P
Sbjct: 4 KRNRPRRGSLAFSPRKRAKRPVPRIRSWPEEDK---VRLQAFPVYKAGMSHALVKENNPK 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S +E +TI+E P + V G+ Y K RGL++L VWA L EE+ R+
Sbjct: 61 SPNANQEVFTPITILEAPDINVFGIRVYGKDTRGLKTLTEVWADELDEELARKI------ 114
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
K + E + + + + ++KI VRVL HT K L +KK ++EI
Sbjct: 115 -------KTLPKKEEKKTVEELDSLVDKIVD----VRVLVHTN-PKNTTLPKKKPEVLEI 162
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
++ G I E+++YA K++ + VF + E +D I VTKGKG++G V RWGV K
Sbjct: 163 RIGGKDIQERLNYAKEILGKKLSITDVFSEGEFVDAIAVTKGKGFQGQVKRWGVKIQFGK 222
Query: 265 THRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
R R V IG W P R+ +TV GQ GYH RTE NK++ K+G G+E
Sbjct: 223 HQRKSVGRHVGSIGPWTPKRIMWTVPMPGQMGYHQRTEYNKRILKIGNSGEE 274
>gi|14520558|ref|NP_126033.1| 50S ribosomal protein L3P [Pyrococcus abyssi GE5]
gi|9910846|sp|Q9V1T5.1|RL3_PYRAB RecName: Full=50S ribosomal protein L3P
gi|5457774|emb|CAB49264.1| rpl3P LSU ribosomal protein L3P [Pyrococcus abyssi GE5]
gi|380741085|tpe|CCE69719.1| TPA: 50S ribosomal protein L3P [Pyrococcus abyssi GE5]
Length = 361
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 164/295 (55%), Gaps = 12/295 (4%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWA------QHLSEEVRRRF 138
+ KE VTIIETPP+ V G+ Y + GL + V ++S++ + R
Sbjct: 60 LT-NGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELDNYVSKKAKGRK 118
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
+ + K++ T K Y D+ ++ + LE + K +V V A + +KK
Sbjct: 119 FTFYQLLKRRIAT-LPKNYTKDDFEQKL-GNLEDMIKEGEIVEVRALVATQPWVIKLKKK 176
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
+ME + G ++ EK +Y K++ V V ++ E++D+I VTKGKG +G V RWG+
Sbjct: 177 PEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGI 236
Query: 259 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ G+
Sbjct: 237 KLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK 291
>gi|223477993|ref|YP_002582389.1| 50S ribosomal protein L3e (L3p) [Thermococcus sp. AM4]
gi|214033219|gb|EEB74047.1| LSU ribosomal protein L3e (L3p) [Thermococcus sp. AM4]
Length = 346
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 154/293 (52%), Gaps = 23/293 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA ++K +PKD R+ F GYKAGMTHI+ + PG
Sbjct: 3 KVHRPRRGSLAFSPRKRARSVVPRIKKWPKDSE---VRMLGFAGYKAGMTHILMIDDSPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
KE VTI+E PP+ V G+ Y + GL + VW L++ V+RR
Sbjct: 60 LT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHELNDNVKRRI------ 112
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVV--RVLAHTQIRKMKGLKQKKAHLM 202
K Y ++ K + QLE + +V R+L HTQ +K +KK +M
Sbjct: 113 ------KTLPKNYGEEDFKAKL-GQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKPEVM 163
Query: 203 EIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 262
E + G + K DYA K++ V + E++D+I VTKGKG +G V RWG+
Sbjct: 164 EYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWGIKVQF 223
Query: 263 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
K R R V +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ G+
Sbjct: 224 HKAQRAGKGRHVGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK 276
>gi|336252440|ref|YP_004595547.1| 50S ribosomal protein L3 [Halopiger xanaduensis SH-6]
gi|335336429|gb|AEH35668.1| ribosomal protein L3 [Halopiger xanaduensis SH-6]
Length = 339
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 153/294 (52%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA+ + ++P DD +P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRKRASSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDQSNSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y T G + + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTAYGKQPVTEVWTDEFVSELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+ D + ++ LE+ + VRV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDPDAAEDELRGLLEEGR--VDDVRVITHTVPTEIPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G + E+VD+A E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GAVEERVDFALELLEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|448630850|ref|ZP_21673305.1| 50S ribosomal protein L3P [Haloarcula vallismortis ATCC 29715]
gi|445755224|gb|EMA06614.1| 50S ribosomal protein L3P [Haloarcula vallismortis ATCC 29715]
Length = 338
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKR+ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSMGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETPPM V + Y TP G R L VW E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D ++ I+ E +RV+ HT + + +KK +ME +V G
Sbjct: 115 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRVITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDLVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + + G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDG 283
>gi|261403779|ref|YP_003248003.1| 50S ribosomal protein L3P [Methanocaldococcus vulcanius M7]
gi|261370772|gb|ACX73521.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7]
Length = 335
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 156/292 (53%), Gaps = 25/292 (8%)
Query: 26 FEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 85
PR GSL F PRKRA R +++++P ++ RL AF YKAGM+H + S
Sbjct: 5 INRPRRGSLAFSPRKRAKRPVPRIRSWPDEEA---VRLQAFPVYKAGMSHAFIKEDNQKS 61
Query: 86 KLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRSLNTVWAQHLSEEVRRRFYKNWCK 144
+E +TI+E PP+ V + Y + R L +L VWA +L +E+ R+
Sbjct: 62 PKAGQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI------ 115
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
E +K++ LE IK VRVL HT K+ L +KK ++EI
Sbjct: 116 -----------NLPKKEERKTVD-DLEAIKDKIEDVRVLVHTN-PKLTCLPKKKPEILEI 162
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
++ G I E+++YA KQ+ + VFQ+ E+ D IG+TKGKG++G V RWGV + +
Sbjct: 163 RIGGKDIEERLNYAKEILGKQLNITDVFQEGELADTIGITKGKGFQGQVKRWGVKIQFGK 222
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R V IG W P + +TV GQ GYH RTE NK++ K+G G+E
Sbjct: 223 HARKGVGRHVGSIGPWQPKMIMWTVPMPGQMGYHQRTEYNKRILKIGNNGEE 274
>gi|134045079|ref|YP_001096565.1| 50S ribosomal protein L3P [Methanococcus maripaludis C5]
gi|166233156|sp|A4FVY2.1|RL3_METM5 RecName: Full=50S ribosomal protein L3P
gi|132662704|gb|ABO34350.1| LSU ribosomal protein L3P [Methanococcus maripaludis C5]
Length = 334
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 162/292 (55%), Gaps = 24/292 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S + +E VT++ETP + V G+ Y KT +GL++L VWA+ L ++ R+
Sbjct: 61 SPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDGDLGRKL----TL 116
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
+KK E KK+ A L+ + + A+ VR + HT K G+ +KK ++EI
Sbjct: 117 AKK-------------EEKKTADA-LDAVVEKATEVRAIVHTN-PKTTGIPKKKPEVVEI 161
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
++ G ++AE++ YA K + + VF+ E+ID + +TKGKG++G V RWG+ + +
Sbjct: 162 RIGGSSVAERLAYAKEILGKTLAIGDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGK 221
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R IG W P RV +TV GQ G+H RTE NK++ KLG G E
Sbjct: 222 HQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273
>gi|332158024|ref|YP_004423303.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
gi|331033487|gb|AEC51299.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
Length = 362
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 164/303 (54%), Gaps = 27/303 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
+ KE VTIIETPP+ + GV Y + GL + V + N+
Sbjct: 60 LT-NGKEIFMPVTIIETPPLRIFGVRAYRQGYLGLETATEVIVPDFELD-------NYVP 111
Query: 145 SKK---KAFTKY----------SKQYETDEGKKSIQAQLEKIKKYASV-VRVLAHTQIRK 190
SKK + FT Y K Y ++ ++ + + IK+ V VR L TQ
Sbjct: 112 SKKGRGRKFTFYQFLGRRIATLPKDYTQEDFEQKLGTLEDMIKEGEIVEVRALVSTQPWV 171
Query: 191 MKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYE 250
+K +KK +ME + G ++ EK +Y K+I V V ++ E++D+I VTKGKG +
Sbjct: 172 IK--LKKKPEVMEYAIGGTSVEEKFNYIKERLGKEIRVGEVLKEGELLDVIAVTKGKGTQ 229
Query: 251 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
G V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+
Sbjct: 230 GPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE 289
Query: 311 GGQ 313
G+
Sbjct: 290 NGK 292
>gi|240104060|ref|YP_002960369.1| 50S ribosomal protein L3P [Thermococcus gammatolerans EJ3]
gi|259709743|sp|C5A286.1|RL3_THEGJ RecName: Full=50S ribosomal protein L3P
gi|239911614|gb|ACS34505.1| LSU ribosomal protein L3P (rpl3P) [Thermococcus gammatolerans EJ3]
Length = 346
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 157/303 (51%), Gaps = 24/303 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA ++K +PKD R+ F GYKAGMTHI+ + PG
Sbjct: 3 KVHRPRRGSLAFSPRKRARSVVPRIKKWPKDSE---VRMLGFAGYKAGMTHILMIDDSPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
KE VTI+E PP+ V G+ Y + GL + VW L++ V+RR
Sbjct: 60 LT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHELNDNVKRRI------ 112
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVV--RVLAHTQIRKMKGLKQKKAHLM 202
K Y ++ K + QLE + +V R+L HTQ +K +KK +M
Sbjct: 113 ------KTLPKNYGEEDFKAKL-GQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKPEVM 163
Query: 203 EIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 262
E + G + K +YA K+I V + E++D+I VTKGKG +G V RWGV
Sbjct: 164 EYAIGGDDVKAKFEYAKERIGKEIRASEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQF 223
Query: 263 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
K R R + +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ G+ G
Sbjct: 224 HKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKLVLNG-N 282
Query: 321 EFD 323
E D
Sbjct: 283 EID 285
>gi|448685260|ref|ZP_21693252.1| 50S ribosomal protein L3P [Haloarcula japonica DSM 6131]
gi|445781871|gb|EMA32722.1| 50S ribosomal protein L3P [Haloarcula japonica DSM 6131]
Length = 338
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKR+ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETPPM V + Y TP G R L VW E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D ++ I+ E +R++ HT + + +KK +ME +V G
Sbjct: 115 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDLVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + + G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDG 283
>gi|15825944|pdb|1JJ2|B Chain B, Fully Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution
gi|20150989|pdb|1KQS|B Chain B, The Haloarcula Marismortui 50s Complexed With A
Pretranslocational Intermediate In Protein Synthesis
gi|22218923|pdb|1K8A|D Chain D, Co-Crystal Structure Of Carbomycin A Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22218957|pdb|1K9M|D Chain D, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal
Subunit Of Haloarcula Marismortui
gi|22219000|pdb|1KD1|D Chain D, Co-crystal Structure Of Spiramycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22219327|pdb|1M1K|D Chain D, Co-Crystal Structure Of Azithromycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|24159022|pdb|1M90|D Chain D, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And
Sparsomycin Bound To The 50s Ribosomal Subunit
gi|34811119|pdb|1K73|D Chain D, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|34811149|pdb|1KC8|D Chain D, Co-Crystal Structure Of Blasticidin S Bound To The 50s
Ribosomal Subunit
gi|34811188|pdb|1N8R|D Chain D, Structure Of Large Ribosomal Subunit In Complex With
Virginiamycin M
gi|34811218|pdb|1NJI|D Chain D, Structure Of Chloramphenicol Bound To The 50s Ribosomal
Subunit
gi|37927902|pdb|1Q7Y|D Chain D, Crystal Structure Of Ccdap-puromycin Bound At The Peptidyl
Transferase Center Of The 50s Ribosomal Subunit
gi|37927937|pdb|1Q81|D Chain D, Crystal Structure Of Minihelix With 3' Puromycin Bound To
A- Site Of The 50s Ribosomal Subunit.
gi|37927973|pdb|1Q82|D Chain D, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of
The 50s Ribosomal Subunit
gi|37928009|pdb|1Q86|D Chain D, Crystal Structure Of Cca-Phe-Cap-Biotin Bound
Simultaneously At Half Occupancy To Both The A-Site And
P- Site Of The The 50s Ribosomal Subunit.
gi|39654674|pdb|1QVF|B Chain B, Structure Of A Deacylated Trna Minihelix Bound To The E
Site Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|39654707|pdb|1QVG|B Chain B, Structure Of Cca Oligonucleotide Bound To The Trna Binding
Sites Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|55670537|pdb|1W2B|B Chain B, Trigger Factor Ribosome Binding Domain In Complex With 50s
gi|145580205|pdb|2OTL|B Chain B, Girodazole Bound To The Large Subunit Of Haloarcula
Marismortui
gi|228311913|pdb|3CXC|B Chain B, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound
To The 50s Ribosomal Subunit Of H. Marismortui
gi|228312143|pdb|3G4S|B Chain B, Co-Crystal Structure Of Tiamulin Bound To The Large
Ribosomal Subunit
gi|228312199|pdb|3G6E|B Chain B, Co-Crystal Structure Of Homoharringtonine Bound To The
Large Ribosomal Subunit
gi|228312235|pdb|3G71|B Chain B, Co-crystal Structure Of Bruceantin Bound To The Large
Ribosomal Subunit
gi|392311507|pdb|3OW2|B Chain B, Crystal Structure Of Enhanced Macrolide Bound To 50s
Ribosomal Subunit
Length = 337
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKR+ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 6 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 63
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETPPM V + Y TP G R L VW E+ R
Sbjct: 64 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 113
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D ++ I+ E +R++ HT + + +KK +ME +V G
Sbjct: 114 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 168
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 169 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 228
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + + G
Sbjct: 229 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDG 282
>gi|448311980|ref|ZP_21501733.1| 50S ribosomal protein L3P [Natronolimnobius innermongolicus JCM
12255]
gi|445603601|gb|ELY57563.1| 50S ribosomal protein L3P [Natronolimnobius innermongolicus JCM
12255]
Length = 339
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 153/294 (52%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVSLRAYEDTPYGKQPITEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+ + ++ ++ L + + VRV+ HT + + +KK +ME +V G
Sbjct: 113 TLDLPGDDYDAEAAEEELRNLLAEGR--IDDVRVITHTVPGSVPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+A E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVGERVDFALELLEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDMGDGADATVDG 284
>gi|148801|gb|AAA86859.1| ribosomal protein L3 [Haloarcula marismortui]
Length = 338
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKR+ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETPPM V + Y TP G R L VW E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D ++ I+ E +R++ HT + + +KK +ME +V G
Sbjct: 115 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + + G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDG 283
>gi|448648021|ref|ZP_21679499.1| 50S ribosomal protein L3P [Haloarcula californiae ATCC 33799]
gi|445775891|gb|EMA26886.1| 50S ribosomal protein L3P [Haloarcula californiae ATCC 33799]
Length = 338
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 155/294 (52%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKR+ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETPPM V + Y TP G R L VW E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D ++ I+ E +R++ HT + + +KK +ME +V G
Sbjct: 115 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDLVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + + G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDGDEPTVDG 283
>gi|55378384|ref|YP_136234.1| 50S ribosomal protein L3P [Haloarcula marismortui ATCC 43049]
gi|344212413|ref|YP_004796733.1| 50S ribosomal protein L3P [Haloarcula hispanica ATCC 33960]
gi|448636987|ref|ZP_21675435.1| 50S ribosomal protein L3P [Haloarcula sinaiiensis ATCC 33800]
gi|57015335|sp|P20279.5|RL3_HALMA RecName: Full=50S ribosomal protein L3P; AltName: Full=Hl1;
AltName: Full=Hmal3
gi|50513471|pdb|1S72|B Chain B, Refined Crystal Structure Of The Haloarcula Marismortui
Large Ribosomal Subunit At 2.4 Angstrom Resolution
gi|66360785|pdb|1YHQ|B Chain B, Crystal Structure Of Azithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360818|pdb|1YI2|B Chain B, Crystal Structure Of Erythromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360851|pdb|1YIJ|B Chain B, Crystal Structure Of Telithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360884|pdb|1YIT|B Chain B, Crystal Structure Of Virginiamycin M And S Bound To The
50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360917|pdb|1YJ9|B Chain B, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of
Haloarcula Marismortui Containing A Three Residue
Deletion In L22
gi|66360950|pdb|1YJN|B Chain B, Crystal Structure Of Clindamycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360983|pdb|1YJW|B Chain B, Crystal Structure Of Quinupristin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|83753127|pdb|1VQ4|B Chain B, The Structure Of The Transition State Analogue "daa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753159|pdb|1VQ5|B Chain B, The Structure Of The Transition State Analogue "raa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753191|pdb|1VQ6|B Chain B, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753223|pdb|1VQ7|B Chain B, The Structure Of The Transition State Analogue "dca" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753254|pdb|1VQ8|B Chain B, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753286|pdb|1VQ9|B Chain B, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753317|pdb|1VQK|B Chain B, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of
The Ribosomal Subunit Of Haloarcula Marismortui
gi|83753348|pdb|1VQL|B Chain B, The Structure Of The Transition State Analogue "dcsn"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|83753379|pdb|1VQM|B Chain B, The Structure Of The Transition State Analogue "dan" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753411|pdb|1VQN|B Chain B, The Structure Of Cc-hpmn And Cca-phe-cap-bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753442|pdb|1VQO|B Chain B, The Structure Of Ccpmn Bound To The Large Ribosomal
Subunit Haloarcula Marismortui
gi|83753474|pdb|1VQP|B Chain B, The Structure Of The Transition State Analogue "rap" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|145580174|pdb|2OTJ|B Chain B, 13-Deoxytedanolide Bound To The Large Subunit Of
Haloarcula Marismortui
gi|171848838|pdb|2QA4|B Chain B, A More Complete Structure Of The The L7L12 STALK OF THE
Haloarcula Marismortui 50s Large Ribosomal Subunit
gi|188596003|pdb|3CC2|B Chain B, The Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution With Rrna Sequence For The 23s Rrna And
Genome-Derived Sequences For R-Proteins
gi|188596034|pdb|3CC4|B Chain B, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|188596065|pdb|3CC7|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2487u
gi|188596096|pdb|3CCE|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535a
gi|188596127|pdb|3CCJ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2534u
gi|188596158|pdb|3CCL|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535c. Density For Anisomycin Is
Visible But Not Included In Model.
gi|188596189|pdb|3CCM|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2611u
gi|188596220|pdb|3CCQ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488u
gi|188596251|pdb|3CCR|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488c. Density For Anisomycin Is
Visible But Not Included In The Model.
gi|188596282|pdb|3CCS|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482a
gi|188596313|pdb|3CCU|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482c
gi|188596344|pdb|3CCV|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2616a
gi|188596375|pdb|3CD6|B Chain B, Co-cystal Of Large Ribosomal Subunit Mutant G2616a With
Cc-puromycin
gi|194368706|pdb|3CPW|B Chain B, The Structure Of The Antibiotic Linezolid Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|206581909|pdb|3CMA|B Chain B, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|206581942|pdb|3CME|B Chain B, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large
Ribosomal Subunit Of Haloarcula Marismortui
gi|208435496|pdb|2QEX|B Chain B, Negamycin Binds To The Wall Of The Nascent Chain Exit
Tunnel Of The 50s Ribosomal Subunit
gi|290790037|pdb|3I55|B Chain B, Co-Crystal Structure Of Mycalamide A Bound To The Large
Ribosomal Subunit
gi|290790068|pdb|3I56|B Chain B, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The
Large Ribosomal Subunit
gi|374977943|pdb|4ADX|B Chain B, The Cryo-Em Structure Of The Archaeal 50s Ribosomal
Subunit In Complex With Initiation Factor 6
gi|55231109|gb|AAV46528.1| 50S ribosomal protein L3 [Haloarcula marismortui ATCC 43049]
gi|343783768|gb|AEM57745.1| 50S ribosomal protein L3P [Haloarcula hispanica ATCC 33960]
gi|445765293|gb|EMA16432.1| 50S ribosomal protein L3P [Haloarcula sinaiiensis ATCC 33800]
Length = 338
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKR+ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETPPM V + Y TP G R L VW E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D ++ I+ E +R++ HT + + +KK +ME +V G
Sbjct: 115 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + + G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDG 283
>gi|448323163|ref|ZP_21512627.1| 50S ribosomal protein L3P [Natronococcus amylolyticus DSM 10524]
gi|445600349|gb|ELY54362.1| 50S ribosomal protein L3P [Natronococcus amylolyticus DSM 10524]
Length = 339
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 151/294 (51%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR+RA+ + ++P DD +P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDEANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPITEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+ D + ++ LE + VRV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDADTAEDELRELLEDGR--VDDVRVITHTVPSAVPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+A + ++ F+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDERVDFALELIADGGEHVMNDTFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|448411357|ref|ZP_21575822.1| 50S ribosomal protein L3P [Halosimplex carlsbadense 2-9-1]
gi|445670545|gb|ELZ23144.1| 50S ribosomal protein L3P [Halosimplex carlsbadense 2-9-1]
Length = 349
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 152/287 (52%), Gaps = 21/287 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR RAA + ++P DD +P L F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRTRAASETPRFNSWPDDD-GQPG-LQGFAGYKAGMTHVVLINDEPDSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETPP+ V + Y TP G R L VWA E+ R
Sbjct: 65 GMEETVPVTVIETPPLRAVALRAYEDTPYGQRPLTEVWADEFHGELDRTL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D ++ I+ E VRV+ HT + G+ +KK +ME +V G
Sbjct: 115 ---DVPEDHDADAAEEQIRQAHEAGD--LGDVRVITHTVPTDIAGVPRKKPEVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++++++D+ + + + VF+ E D+ VTKGKG +G V RWGV + K
Sbjct: 170 GSLSDRLDFGLDLVAEGGEHSMTDVFRAGEYADVAAVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEG 276
>gi|448415419|ref|ZP_21578219.1| 50S ribosomal protein L3P [Halosarcina pallida JCM 14848]
gi|445681077|gb|ELZ33518.1| 50S ribosomal protein L3P [Halosarcina pallida JCM 14848]
Length = 338
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 155/294 (52%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+G+ PR RA + ++K++P DD S L F GYKAGMT ++ ++ S
Sbjct: 7 PRKGSMGYGPRTRATKEVPRIKSWPDDDGS--PALQGFAGYKAGMTQVMMVNDESNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y TP G + L VWA E + R
Sbjct: 65 GMEEAVPVTVVETPPMRAVALRAYEDTPYGTKPLTEVWASEFDENLDRAL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ D+ +++ LE + VRV+ HT MK + +KK +ME +V G
Sbjct: 115 ---DLPSEDTFDDDADDLRSALEAGE--VDDVRVITHTVPAGMKNIPKKKPDIMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ ++VD+A + + + VF+ E +D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSLDDRVDFALDLVGEGGEHAMSDVFRAGEYMDVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLVDIGDGDEASVDG 283
>gi|388493378|gb|AFK34755.1| unknown [Lotus japonicus]
Length = 173
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/87 (91%), Positives = 84/87 (96%)
Query: 237 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 296
MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH
Sbjct: 1 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 60
Query: 297 HRTEMNKKVYKLGKGGQESHTGITEFD 323
HRTE+NKK+Y+LGK G ESH+ ITEFD
Sbjct: 61 HRTELNKKIYRLGKAGDESHSAITEFD 87
>gi|448329359|ref|ZP_21518659.1| 50S ribosomal protein L3P [Natrinema versiforme JCM 10478]
gi|445614098|gb|ELY67779.1| 50S ribosomal protein L3P [Natrinema versiforme JCM 10478]
Length = 339
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 153/294 (52%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P D +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G++ + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+TD + ++ LE+ + VRV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDTDASEDELRGLLEEGR--VDDVRVITHTVPGDVPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ ++V++A + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDDRVEFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|448681421|ref|ZP_21691554.1| 50S ribosomal protein L3P [Haloarcula argentinensis DSM 12282]
gi|445767954|gb|EMA19047.1| 50S ribosomal protein L3P [Haloarcula argentinensis DSM 12282]
Length = 338
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKR+ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSMGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETPPM V + Y TP G R L VW E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D ++ I+ E +R++ HT + + +KK +ME +V G
Sbjct: 115 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + + G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDG 283
>gi|448460077|ref|ZP_21596997.1| 50S ribosomal protein L3P [Halorubrum lipolyticum DSM 21995]
gi|445807795|gb|EMA57876.1| 50S ribosomal protein L3P [Halorubrum lipolyticum DSM 21995]
Length = 338
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 154/294 (52%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA R +++++P DD P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
ET VT++ETPPM V + Y +TP G + + VWA EE+ R
Sbjct: 65 GMETSVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRAL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ +E ++A L+ + VRV+ HT ++ + +KK +ME +V G
Sbjct: 115 ---DLPAEDTFEEDADELRALLD--EGAVDDVRVITHTVPSELANVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEKQIP--VDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+ + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+G S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDASVDG 283
>gi|448463230|ref|ZP_21598008.1| 50S ribosomal protein L3P [Halorubrum kocurii JCM 14978]
gi|445817225|gb|EMA67101.1| 50S ribosomal protein L3P [Halorubrum kocurii JCM 14978]
Length = 338
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 154/294 (52%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA R +++++P DD P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
ET VT++ETPPM V + Y +TP G + + VWA EE+ R
Sbjct: 65 GMETSVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRAL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ +E ++A L+ + VRV+ HT ++ + +KK +ME +V G
Sbjct: 115 ---DLPAEDTFEEDADELRALLD--EGAVDDVRVITHTVPSELANVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEKQIP--VDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+ + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+G S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDASVDG 283
>gi|27066406|pdb|1FFK|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From
Haloarcula Marismortui At 2.4 Angstrom Resolution
Length = 337
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 157/294 (53%), Gaps = 22/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKR+ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 6 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 63
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
ET VT+IETPPM V + Y TP G R L VW E+ R
Sbjct: 64 GMETV-PVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D ++ I+ E +R++ HT + + +KK +ME +V G
Sbjct: 113 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 167
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 168 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 227
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + + G
Sbjct: 228 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDG 281
>gi|222480857|ref|YP_002567094.1| 50S ribosomal protein L3P [Halorubrum lacusprofundi ATCC 49239]
gi|222453759|gb|ACM58024.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239]
Length = 338
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 154/294 (52%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA R +++++P DD P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
ET VT++ETPPM V + Y +TP G + + VWA EE+ R
Sbjct: 65 GMETSVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRAL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ +E ++A L+ + VRV+ HT ++ + +KK +ME +V G
Sbjct: 115 ---DLPAEDTFEEDADELRALLD--EGAVDDVRVITHTVPSELANVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEKQIP--VDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+ + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+G S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDASVDG 283
>gi|389848017|ref|YP_006350256.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
gi|388245323|gb|AFK20269.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
Length = 327
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 156/292 (53%), Gaps = 27/292 (9%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S E
Sbjct: 1 MGFSPRKRAVKEVPRIKSWPDDDGS--PALQGFAGYKAGMTHVMMVNDEADSPREGMEES 58
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF---YKNWCKSKKKAF 150
VT++ETPPM V + Y +TP G++ VWA +E+ R ++ +S A
Sbjct: 59 VPVTVVETPPMRAVALRAYEQTPYGMKPKTEVWASEFHDELDRVLDLPAEDTFESDADAL 118
Query: 151 TKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGT 210
+ + E D+ +RV+ HT ++K + +KK +ME +V GG+
Sbjct: 119 REAVEAGEVDD------------------LRVITHTVPAELKNVPKKKPDVMETRVGGGS 160
Query: 211 IAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
+ E+ D+A E+ + + VF+ E +D GVTKGKG +G V RWGV + K R
Sbjct: 161 MVERADFALDLVEEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQ 220
Query: 269 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+G S G
Sbjct: 221 GWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDASVEG 272
>gi|448578201|ref|ZP_21643636.1| 50S ribosomal protein L3P [Haloferax larsenii JCM 13917]
gi|445726742|gb|ELZ78358.1| 50S ribosomal protein L3P [Haloferax larsenii JCM 13917]
Length = 338
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 158/297 (53%), Gaps = 27/297 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRATKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF---YKNWCKS 145
E VT++ETPPM V V Y +T G++ VWA +E+ R ++ +
Sbjct: 65 GMEEAVPVTVVETPPMRAVAVRAYEQTSYGMKPKTEVWASEFHDELDRVLDLPAEDTFEE 124
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
+A + + E D+ +RV+ HT +K + +KK +ME +
Sbjct: 125 DAEALREAVEAGEVDD------------------LRVITHTVPAGLKNVPKKKPDVMETR 166
Query: 206 VNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
V GG++ E+ D+A + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSLVERADFALELVGEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 264 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+G + + G
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEPTVDG 283
>gi|14278035|pdb|1GIY|E Chain E, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1giy, Contains The 50s Ribosome Subunit. The
30s Ribosome Subunit, Three Trna, And Mrna Molecules Are
In The File 1gix
gi|28373724|pdb|1ML5|EE Chain e, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|66361021|pdb|1YL3|E Chain E, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. Large Subunit. The Coordinates For The Small
Subunit Are In The Pdb Entry 1yl4.
gi|88192261|pdb|2B66|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
Factor Rf1, Trnas And Mrna Bound To The Ribosome. This
File Contains The 50s Subunit From A Crystal Structure
Of Release Factor Rf1, Trnas And Mrna Bound To The
Ribosome And Is Described In Remark 400
gi|88192324|pdb|2B9N|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
Factor Rf2, Trnas And Mrna Bound To The Ribosome. This
File Contains The 50s Subunit From A Crystal Structure
Of Release Factor Rf1, Trnas And Mrna Bound To The
Ribosome And Is Described In Remark 400.
gi|88192379|pdb|2B9P|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of The
Ribosome In Complex With Trnas And Mrna With A Stop
Codon In The A-Site. This File Contains The 50s Subunit
From A Crystal Structure Of The Ribosome In Complex With
Trnas And Mrna With A Stop Codon In The A-Site And Is
Described In Remark 400
Length = 338
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 154/296 (52%), Gaps = 25/296 (8%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKR+ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 6 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 63
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETPPM V + Y TP G R L VW E+ R
Sbjct: 64 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLSD-------- 115
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASV--VRVLAHTQIRKMKGLKQKKAHLMEIQV 206
D ++ Q+ + + +R++ HT + + +KK +ME +V
Sbjct: 116 ---------RLDHALDIVEDQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRV 166
Query: 207 NGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
GG++++++D+A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 167 GGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGK 226
Query: 265 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + + G
Sbjct: 227 HARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVDG 282
>gi|448399310|ref|ZP_21570612.1| 50S ribosomal protein L3P [Haloterrigena limicola JCM 13563]
gi|445669217|gb|ELZ21830.1| 50S ribosomal protein L3P [Haloterrigena limicola JCM 13563]
Length = 339
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 152/294 (51%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G++ L VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVSLRAYEDTPYGMKPLTEVWTDEFVPELDRVLDLPGDDYDAD 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
A T + +EG+ VRV+ HT ++ + +KK +ME +V G
Sbjct: 125 AATDELRGLH-EEGR-------------VDDVRVITHTVPSEVPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+A E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDERVDFALELLEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|433590194|ref|YP_007279690.1| archaeal ribosomal protein L3 [Natrinema pellirubrum DSM 15624]
gi|448332400|ref|ZP_21521644.1| 50S ribosomal protein L3P [Natrinema pellirubrum DSM 15624]
gi|433304974|gb|AGB30786.1| archaeal ribosomal protein L3 [Natrinema pellirubrum DSM 15624]
gi|445627504|gb|ELY80828.1| 50S ribosomal protein L3P [Natrinema pellirubrum DSM 15624]
Length = 339
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 152/294 (51%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P D +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPITEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+ D + ++ L + + VRV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDIPGDDYDVDAAEDELRGLLAEGR--VDDVRVITHTVPTEIPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G+I E+VD+A + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSIEERVDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGEGADATVDG 284
>gi|333987679|ref|YP_004520286.1| 50S ribosomal protein L3 [Methanobacterium sp. SWAN-1]
gi|333825823|gb|AEG18485.1| ribosomal protein L3 [Methanobacterium sp. SWAN-1]
Length = 336
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 154/284 (54%), Gaps = 23/284 (8%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 87
PR GS+ F PRKRAA ++ A+P+ + + C L F GYK GMTHI + S
Sbjct: 6 QPRKGSVAFSPRKRAASETPRITAWPETEEA--C-LLGFPGYKVGMTHITMLDSRKSSPT 62
Query: 88 HKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKK 147
E VTI+E PP++V+G+ Y + RGL++L + A L E+++R
Sbjct: 63 EGMEISTPVTILEAPPIVVMGIRAYRQDTRGLKTLADILANDLDEDLQRTI--------- 113
Query: 148 KAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVN 207
K+ + + K + ++++I +RVL HT+ R + + +KK ++E V
Sbjct: 114 ----SLPKENDLEAKLKDFKEKMDEIVD----IRVLVHTKPR-LASVPKKKPEILECGVG 164
Query: 208 GGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 267
G T+AEK+DYA K++ VF E D I +TKGKG++G V R+G+ K R
Sbjct: 165 GKTVAEKLDYAVSVLGKELNPSDVFADGEHTDSIAITKGKGFQGPVKRFGIRIQYGKAAR 224
Query: 268 GL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
R V IG W+P+R +TVA AGQ GYH RTE NKK+ K+G
Sbjct: 225 SSKERHVGSIGPWNPSRTMWTVAMAGQMGYHKRTEFNKKILKIG 268
>gi|448441449|ref|ZP_21589112.1| 50S ribosomal protein L3P [Halorubrum saccharovorum DSM 1137]
gi|445688858|gb|ELZ41105.1| 50S ribosomal protein L3P [Halorubrum saccharovorum DSM 1137]
Length = 338
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 153/294 (52%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA R +++++P DD P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y +TP G + + VWA EE+ R
Sbjct: 65 GMEESVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRAL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ +E ++A L+ + VRV+ HT ++ + +KK +ME +V G
Sbjct: 115 ---DLPAEDTFEEDADELRALLD--EDAVDDVRVITHTVPSELSNVPKKKPDIMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEKQIP--VDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+ + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+G S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDASVDG 283
>gi|449707707|gb|EMD47318.1| 60S ribosomal protein L3, partial [Entamoeba histolytica KU27]
Length = 168
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 115/168 (68%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL F PRKR + R V AFPKD+ ++ LT FLG+KAGMTH++R+V
Sbjct: 1 MSHRKFEAPRHGSLAFHPRKRVHKVRATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ +KL K E VTIIETPPM+V G VGY KT GL+ + V+A+H+++E +RR+ K
Sbjct: 61 KRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTK 120
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQI 188
W K+ K F ++++Y + K + Q+ IK VVRV+AHTQ+
Sbjct: 121 KWYKNTKNQFAVHTEKYNDVKAKSKRERQIRLIKNRCDVVRVIAHTQM 168
>gi|148642822|ref|YP_001273335.1| 50S ribosomal protein L3P [Methanobrevibacter smithii ATCC 35061]
gi|222445053|ref|ZP_03607568.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii
DSM 2375]
gi|261350378|ref|ZP_05975795.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
gi|166233159|sp|A5UL89.1|RL3_METS3 RecName: Full=50S ribosomal protein L3P
gi|148551839|gb|ABQ86967.1| ribosomal protein L3p [Methanobrevibacter smithii ATCC 35061]
gi|222434618|gb|EEE41783.1| archaeal ribosomal protein L3 [Methanobrevibacter smithii DSM 2375]
gi|288861161|gb|EFC93459.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
Length = 336
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 152/284 (53%), Gaps = 25/284 (8%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH-IVRDVEKPGSK 86
PR GS+ F PRKRAA+ ++K++P++D K L GYK GMTH +V D +K S
Sbjct: 6 QPRKGSVAFSPRKRAAKETPRIKSWPQNDEPK---LLGLAGYKVGMTHALVTDSDK-NSP 61
Query: 87 LHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
+ + VT++E PP++V+G+ Y KT RGL+ + V A +L EE+ R+
Sbjct: 62 TNGMDVFTPVTVLEVPPVVVMGIRAYEKTSRGLKVITEVLADNLDEELSRKI-------- 113
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
K+Y E IQ L+K + ++VL HT K+ + +KK + E +
Sbjct: 114 -----SLPKEYNKSEAIAKIQGVLDKTED----IKVLVHTN-PKVTSVPKKKPDIFECGI 163
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G EK++ A ++ + + + +D I TKGKG++GVV RWG+ K
Sbjct: 164 GGANPEEKLNTALELLGNEVKASDILNEGQFVDAIATTKGKGFQGVVKRWGIRIQYGKAV 223
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
R R V IG W P+R +TVA+AGQ GYH RTE NKK+ K+
Sbjct: 224 RAGKGRHVGSIGPWTPSRTMWTVAQAGQMGYHKRTEFNKKILKI 267
>gi|170516812|gb|ACB15214.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 358
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 162/287 (56%), Gaps = 9/287 (3%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+G+ PRKRA R G++ ++P+ D S R+ F G+KAGMTH++ P S
Sbjct: 7 PRRGSMGYSPRKRANRQYGRISSWPESD-SAEIRVQGFAGWKAGMTHLLVRDNNPNSSSA 65
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLS--EEVRRRFYKNWCKSK 146
++E +AVT++E PPM V+ V GY TP G+++ W S E + R N + +
Sbjct: 66 QQEVRKAVTVVEAPPMSVLAVRGYRMTPYGMQTAGEAWFNSDSGPEGLSPRL-ANQSRGE 124
Query: 147 KKAFT--KYSKQYE--TDEGKKSIQAQLEKIKKYASV-VRVLAHTQIRKMKGLKQKKAHL 201
+ A K SK+ G+ S A LE +++ VR++ TQ +K + K +
Sbjct: 125 RDAEEGRKPSKRAGRIPSRGEGSPDAALEALREVDLCEVRLIVSTQPALVKSVSSKTPEI 184
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
ME+ + GG A K+D+A I +D V++ + ID++GVTKGKG++G + RWG+ L
Sbjct: 185 MEVALAGGDNASKLDWAEERLGGAITLDDVYETGQEIDVVGVTKGKGWQGAIKRWGIKLL 244
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
K + R+ +G + V T+ +AGQ GYH+RTE+NK++ ++
Sbjct: 245 SHKNSKRRRQGGNMGDFGTGYVRKTIRQAGQVGYHNRTELNKRILRV 291
>gi|448386089|ref|ZP_21564297.1| 50S ribosomal protein L3P [Haloterrigena thermotolerans DSM 11522]
gi|445655987|gb|ELZ08829.1| 50S ribosomal protein L3P [Haloterrigena thermotolerans DSM 11522]
Length = 339
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 152/294 (51%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P D +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPITEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+ D + ++ L + + VRV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDIPGDDYDVDAAEDELRGLLSEGR--VDDVRVITHTVPTEIPSVPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+A + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGEGADATVDG 284
>gi|448369939|ref|ZP_21556392.1| 50S ribosomal protein L3P [Natrialba aegyptia DSM 13077]
gi|445650379|gb|ELZ03303.1| 50S ribosomal protein L3P [Natrialba aegyptia DSM 13077]
Length = 340
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 153/295 (51%), Gaps = 21/295 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+TD ++ LE+ + VRV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDTDAAADELRGFLEEGR--VDDVRVITHTVPGDIPSMPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK---QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
G++ ++VDYA E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEDRVDYALELLEDGGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKH 230
Query: 266 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 285
>gi|390960794|ref|YP_006424628.1| 50S ribosomal protein L3P [Thermococcus sp. CL1]
gi|390519102|gb|AFL94834.1| 50S ribosomal protein L3P [Thermococcus sp. CL1]
Length = 347
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 155/293 (52%), Gaps = 23/293 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL + PRKRA +++ +P+D R+ F GYKAGMTH++ ++PG
Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRKWPQDSE---VRMLGFAGYKAGMTHVLMIDDRPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
KE VT++E PP+ V G+ Y + GL + VW L++ VRRR
Sbjct: 60 LT-KGKEIFMPVTVVEVPPLFVYGIRAYRQGYLGLETATEVWFHELNDYVRRRI------ 112
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVV--RVLAHTQIRKMKGLKQKKAHLM 202
K Y+ +E K+ QLE + +V R+L HTQ +K +KK +M
Sbjct: 113 ------KTLPKNYD-EEAFKAKLGQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKPEVM 163
Query: 203 EIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 262
E + G + K DYA K++ V + E++D+I VTKGKG +G V RWGV
Sbjct: 164 EYAIGGDDVRAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWGVKIQF 223
Query: 263 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
K R R + +G WHP RV +TV +AGQ G+HHRTE NK++ +G+ G+
Sbjct: 224 HKAQRAGKGRHIGNLGPWHPTRVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK 276
>gi|448592779|ref|ZP_21651826.1| 50S ribosomal protein L3P [Haloferax elongans ATCC BAA-1513]
gi|445730805|gb|ELZ82392.1| 50S ribosomal protein L3P [Haloferax elongans ATCC BAA-1513]
Length = 338
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 158/297 (53%), Gaps = 27/297 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRATKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF---YKNWCKS 145
E VT++ETPPM + + Y +T G++ VWA +E+ R ++ +
Sbjct: 65 GMEEAVPVTVVETPPMRAIALRAYEQTSYGMKPKTEVWASEFHDELDRVLDLPAEDTFEE 124
Query: 146 KKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
+A + + E D+ +RV+ HT +K + +KK +ME +
Sbjct: 125 DAEALREAVEAGEVDD------------------LRVITHTVPAGLKNVPKKKPDVMETR 166
Query: 206 VNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
V GG++ E+ D+A + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSLVERADFALELVGEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 264 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+G + + G
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEPTVDG 283
>gi|57641477|ref|YP_183955.1| 50S ribosomal protein L3P [Thermococcus kodakarensis KOD1]
gi|73917495|sp|Q5JDJ0.1|RL3_PYRKO RecName: Full=50S ribosomal protein L3P
gi|57159801|dbj|BAD85731.1| LSU ribosomal protein L3P [Thermococcus kodakarensis KOD1]
Length = 346
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 156/293 (53%), Gaps = 23/293 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL + PRKRA +++++PKD R+ F GYKAGMTHI+ + PG
Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRSWPKDSE---VRMLGFAGYKAGMTHILMIDDSPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
KE VTI+E PP+ V G+ Y + GL + VW L + V RR K
Sbjct: 60 LT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHDLHKNVARR-----IK 113
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASV--VRVLAHTQIRKMKGLKQKKAHLM 202
+ K + +E ++ QLE + + VR+L HTQ + GLK KK +M
Sbjct: 114 TLPKNYN--------EEAFQAKLGQLEDLVNDGEIADVRLLVHTQ-PWLIGLK-KKPEVM 163
Query: 203 EIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 262
E + G + K DYA K++ V + E++D+I VTKGKG +G V RWGV
Sbjct: 164 EYAIGGDDVKAKFDYAKEKIGKELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQF 223
Query: 263 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
K R R + +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ G+
Sbjct: 224 HKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK 276
>gi|297619637|ref|YP_003707742.1| 50S ribosomal protein L3 [Methanococcus voltae A3]
gi|297378614|gb|ADI36769.1| ribosomal protein L3 [Methanococcus voltae A3]
Length = 333
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 162/292 (55%), Gaps = 25/292 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA R K++++P D+ RL A+ YKAG+TH + P
Sbjct: 4 KKNRPRRGSLAFSPRKRAKRIVPKIRSWPVDEK---VRLQAYPVYKAGVTHALYVENNPK 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S ++E VT++ETP + + G+ Y K GL+ L VWA L +E+ R+
Sbjct: 61 SPNAEQEVASPVTVLETPNITIAGIRVYKKDTNGLKVLTEVWAPELDQELARKL----TV 116
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
+KK+ KS+ L+ + VRV+ +T I K + +KK ++EI
Sbjct: 117 AKKEL--------------KSVDT-LDSLINEIVDVRVIVYT-IPKETAIAKKKPEVVEI 160
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
+V G ++ E+++YA G +++ ++ VF+ E+ID + VTKGKG++G V RWG+ + +
Sbjct: 161 RVGGSSVDERLNYAKGILGQKLSINDVFEAGEIIDTVAVTKGKGFQGSVKRWGIKIQFGK 220
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+G+ R IG W P RV ++V GQ G+H RTE NK+++K+G G E
Sbjct: 221 HQRKGVGRHTGSIGPWRPRRVMWSVPLPGQMGFHQRTEYNKRIFKIGAEGTE 272
>gi|18978197|ref|NP_579554.1| 50S ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
gi|397652527|ref|YP_006493108.1| 50S ribosomal protein L3P [Pyrococcus furiosus COM1]
gi|42559663|sp|Q8TZZ8.1|RL3_PYRFU RecName: Full=50S ribosomal protein L3P
gi|428697961|pdb|3J21|C Chain C, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (50s Ribosomal Proteins)
gi|18894006|gb|AAL81949.1| LSU ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
gi|393190118|gb|AFN04816.1| 50S ribosomal protein L3P [Pyrococcus furiosus COM1]
Length = 365
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 159/309 (51%), Gaps = 17/309 (5%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSLGF PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
+ KE VTIIETPP+ V G+ Y GL + V + + K
Sbjct: 60 LT-NGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLD---NYPAKERK 115
Query: 145 SKKKAFTKYSKQYE----------TDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGL 194
K K + K E T E + QLE + K +V V A +
Sbjct: 116 GKPKPKMTFYKLLERRIATLPKNYTQEMFEQKLGQLEDMIKEGEIVDVRAIVATQPWVIK 175
Query: 195 KQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVT 254
+KK +ME + G ++ EK +Y K++ V V ++ E++D+I VTKGKG +G V
Sbjct: 176 LKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVK 235
Query: 255 RWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ G+
Sbjct: 236 RWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKL 295
Query: 315 SHTGITEFD 323
TE +
Sbjct: 296 KLDENTEIE 304
>gi|212223211|ref|YP_002306447.1| 50S ribosomal protein L3P [Thermococcus onnurineus NA1]
gi|226730581|sp|B6YSL3.1|RL3_THEON RecName: Full=50S ribosomal protein L3P
gi|212008168|gb|ACJ15550.1| LSU ribosomal protein L3P [Thermococcus onnurineus NA1]
Length = 347
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 156/296 (52%), Gaps = 29/296 (9%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL + PRKRA +++ +PKD R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRKWPKDSE---VRMLGFAGYKAGMTHILMIDDRPG 59
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
KE VT++E PP+ V G+ Y + GL + VW L++ V+RR
Sbjct: 60 LT-KGKEIFMPVTVVEVPPLFVYGIRAYRQGYLGLETATEVWFHELNDYVKRRI------ 112
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASV-----VRVLAHTQIRKMKGLKQKKA 199
K D +++ QA+L +++ + VR+L HTQ +K +KK
Sbjct: 113 ----------KTLPKDYNEEAFQAKLGQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKP 160
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
+ME + G + K DYA K++ V + E++D+I VTKGKG +G V RWG+
Sbjct: 161 EVMEYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWGIK 220
Query: 260 RLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
K R R V +G WHP RV +TV +AGQ G+HHRTE NK++ +G+ G+
Sbjct: 221 IQFHKAQRAGKGRHVGNLGPWHPTRVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK 276
>gi|448352597|ref|ZP_21541379.1| 50S ribosomal protein L3P [Natrialba hulunbeirensis JCM 10989]
gi|445642159|gb|ELY95229.1| 50S ribosomal protein L3P [Natrialba hulunbeirensis JCM 10989]
Length = 340
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 155/295 (52%), Gaps = 21/295 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR+RA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKQPVTEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+TD ++ LE+ + VRV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDTDAAADELRGLLEEGR--VDDVRVITHTVPGDVPSMPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK---QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
G++ E+VDYA E+ + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDYALELVEEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKH 230
Query: 266 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 285
>gi|289579898|ref|YP_003478364.1| 50S ribosomal protein L3 [Natrialba magadii ATCC 43099]
gi|448281138|ref|ZP_21472446.1| 50S ribosomal protein L3P [Natrialba magadii ATCC 43099]
gi|448358804|ref|ZP_21547478.1| 50S ribosomal protein L3P [Natrialba chahannaoensis JCM 10990]
gi|289529451|gb|ADD03802.1| ribosomal protein L3 [Natrialba magadii ATCC 43099]
gi|445579462|gb|ELY33856.1| 50S ribosomal protein L3P [Natrialba magadii ATCC 43099]
gi|445644484|gb|ELY97497.1| 50S ribosomal protein L3P [Natrialba chahannaoensis JCM 10990]
Length = 340
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 155/295 (52%), Gaps = 21/295 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR+RA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTPYGKQPVTEVWTDEFVPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+TD ++ LE+ + VRV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDTDAAADELRGLLEEGR--VDDVRVITHTVPGDVPSMPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK---QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
G++ E+VDYA E+ + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDYALELVEEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKH 230
Query: 266 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 285
>gi|452206448|ref|YP_007486570.1| 50S ribosomal protein L3 [Natronomonas moolapensis 8.8.11]
gi|452082548|emb|CCQ35806.1| 50S ribosomal protein L3 [Natronomonas moolapensis 8.8.11]
Length = 336
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 151/288 (52%), Gaps = 26/288 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PR RAA + ++P DD +P L F GYKAGM+H+V ++P S
Sbjct: 7 PRKGSMGFSPRSRAASEVPRFNSWP-DDEGQPG-LQGFAGYKAGMSHVVTINDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
+E VT++ETPPM V V Y TP G R L +W + E++ R
Sbjct: 65 GQEETVPVTVVETPPMRAVAVRAYEDTPYGTRPLTELWTDEVHEDLGRALSV-------- 116
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASV--VRVLAHTQIRKMKGLKQKKAHLMEIQV 206
DE ++Q+ + ++ VRV+ HT + + +K+ +ME +V
Sbjct: 117 ----------PDEQSGGAESQIREALDSGALADVRVITHTLPSGLSSVPKKEPDVMETRV 166
Query: 207 NGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
GG + +++++A+ + + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 167 GGGALGDRLEFAFDLVDDGGEHAATDVFRAGQYADVAGITKGKGTQGPVKRWGVQKRKGK 226
Query: 265 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG
Sbjct: 227 HARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDLGD 274
>gi|257387876|ref|YP_003177649.1| 50S ribosomal protein L3P [Halomicrobium mukohataei DSM 12286]
gi|257170183|gb|ACV47942.1| ribosomal protein L3 [Halomicrobium mukohataei DSM 12286]
Length = 338
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 152/294 (51%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RAA + ++P DD L F GYKAGMTH+ ++P S
Sbjct: 7 PRKGSLGYGPRTRAANETPRFNSWPSDDGQ--AGLQGFAGYKAGMTHVTLVNDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPP+ V V Y TP G R L VW E+ R
Sbjct: 65 GMEETVPVTVVETPPVRAVAVRAYEDTPYGKRPLTEVWTDEFHSELDRAL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ ++ D ++ ++ L+ + VRV+ HT ++ + +KK +ME +V G
Sbjct: 115 ---DLPEGHDADAAEEQVRDALDAGD--IADVRVVTHTVPDELANVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G+++++ ++A + + ++ VF+ E DI VTKGKG +G V RWGV + K
Sbjct: 170 GSLSDRFEHALELVDDGGEHAMNDVFRAGEYADIAAVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDGDDASVDG 283
>gi|20093853|ref|NP_613700.1| 50S ribosomal protein L3P [Methanopyrus kandleri AV19]
gi|42559662|sp|Q8TY90.1|RL3_METKA RecName: Full=50S ribosomal protein L3P
gi|19886782|gb|AAM01630.1| Ribosomal protein L3 [Methanopyrus kandleri AV19]
Length = 361
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 150/284 (52%), Gaps = 21/284 (7%)
Query: 33 SLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKET 92
SL F PRKRA+R +++++P ++ R+ F GYKAGMTH + + P S +E
Sbjct: 16 SLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTEGEEI 72
Query: 93 CEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTK 152
VTI++ PPM V + Y TP G R + WA+ E R + + K
Sbjct: 73 SVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVFTVPKDGEAGDLDK 132
Query: 153 YSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIA 212
+ DEG +RV+ TQ +K G+ +KK +ME ++ G +
Sbjct: 133 IEEL--VDEG-------------IVEEIRVIVATQPKKA-GVPKKKPDVMEYRIGGKDVR 176
Query: 213 EKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--R 270
E+ +YA ++I VF + E++D+ +TKGKG++GVV RWGVT RKT R R
Sbjct: 177 ERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGKGFQGVVKRWGVTIQDRKTQRKQKGR 236
Query: 271 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+ IG P+RV +TV AGQ GYH RTE NK++ K+G+ G+E
Sbjct: 237 HIGSIGPITPSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE 280
>gi|399577346|ref|ZP_10771099.1| 50S ribosomal protein L3P [Halogranum salarium B-1]
gi|399237729|gb|EJN58660.1| 50S ribosomal protein L3P [Halogranum salarium B-1]
Length = 327
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 21/289 (7%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+GF PRKRAA +++++P DD P L F GYKAGMTH+V ++ S E
Sbjct: 1 MGFGPRKRAASEVPRIRSWP-DDEGSPA-LQGFAGYKAGMTHVVMVNDESNSPREGMEES 58
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
VT++ETPPM V + Y T G + + VW EE+ R
Sbjct: 59 VPVTVVETPPMRAVALRAYKDTAYGKKPVTEVWTTEFHEELDRTL-------------DL 105
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
+ DE ++A L+ K +R++ HT + + +KK +ME +V GG++ E
Sbjct: 106 PAESTFDEDADELRALLDDGK--VDDLRMITHTVPSALNNVPKKKPDVMETRVGGGSLDE 163
Query: 214 KVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--L 269
+ DYA E + +D VF+ E +D+ GVTKGKG +G V RWGV + K R
Sbjct: 164 RADYALELVEAGGEHSMDDVFRPGEYLDVSGVTKGKGTQGPVKRWGVQKRKGKHARQGWR 223
Query: 270 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G S G
Sbjct: 224 RRIGNLGPWNPSRVRSTVPQQGQMGYHQRTELNKRLIDVGEGDDASVDG 272
>gi|119873281|ref|YP_931288.1| 50S ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
gi|212288410|sp|A1RVG3.1|RL3_PYRIL RecName: Full=50S ribosomal protein L3P
gi|119674689|gb|ABL88945.1| LSU ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
Length = 342
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 156/295 (52%), Gaps = 25/295 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GS+G PRKRAA +V+ +P+ + KP L F YKAGM H V ++P
Sbjct: 8 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPT-LLGFAAYKAGMLHAVVVEDRPT 66
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG--LRSLNTVWAQHLSEEVRRRFYKNW 142
S L+ KE +AVT+++ PP+ + G Y P RS+ VWA L +RR
Sbjct: 67 SPLYGKEVVKAVTVLDAPPLFIWGFRLYTLDPTNGYKRSIAEVWAPELPAYLRR------ 120
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
++ + D+ K + E+ K A VR L TQ + G+ +K L+
Sbjct: 121 -------VLTLPEKVDVDKQMKKV----EEFKDVAVDVRALVATQ-PHLSGIGKKTPELL 168
Query: 203 EIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
EI + G ++ E++ +A K + VF +++D+I VTKGKGY+GV+ R+GVT L
Sbjct: 169 EIPIGGVPSVDERIKFAVSLLGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGVTIL 228
Query: 262 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
PR K +G R+ IG PA V FT R GQ G+H RTE NK++ K+G G E
Sbjct: 229 PRWHKHRKGHRRTGTIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRIIKIGDNGAE 282
>gi|448475310|ref|ZP_21603028.1| 50S ribosomal protein L3P [Halorubrum aidingense JCM 13560]
gi|445816781|gb|EMA66668.1| 50S ribosomal protein L3P [Halorubrum aidingense JCM 13560]
Length = 338
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 152/294 (51%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA R +++++P DD P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y +TP G++ + VWA EE+ R
Sbjct: 65 GMEESVPVTVVETPPMYAVALRAYEQTPYGMKPVEEVWATEFHEELDRAL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ +E + ++A L+ RV+ HT ++ + +KK +ME +V G
Sbjct: 115 ---DLPAEDTFEEDAEELRALLDDDVVDDV--RVITHTVPSELANVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEKQIP--VDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G+ E+VD+ + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSFEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+G S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDASVDG 283
>gi|126460189|ref|YP_001056467.1| 50S ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
gi|212288409|sp|A3MWI4.1|RL3_PYRCJ RecName: Full=50S ribosomal protein L3P
gi|126249910|gb|ABO09001.1| LSU ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
Length = 338
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 161/295 (54%), Gaps = 25/295 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GS+G PRKRAA +V+ +P+ + KP L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPT-LLGFAAYKAGMLHAVVVDDRPT 62
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTP-RGLR-SLNTVWAQHLSEEVRRRFYKNW 142
S L+ KE +AVT+++ PP+ V V Y P G + ++ W ++RR
Sbjct: 63 SPLYGKEVVKAVTVLDAPPLYVAAVRLYTLDPTNGYKVAVGEAWVSEPPADLRR------ 116
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
++++T++ K+ LE+ + A VRVL TQ R + G+ +K ++
Sbjct: 117 -------VLTLPEKFDTEKQLKA----LEEYRDVAVDVRVLVATQPR-LSGIGKKTPEVL 164
Query: 203 EIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
EI V G +I E++++A K + VF +++D+I VTKGKGY+GVV R+GVT L
Sbjct: 165 EIPVGGVPSIDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVVKRFGVTIL 224
Query: 262 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
PR K +G R+ IG PA + FT R GQ G+H RTE NK++ K+G G E
Sbjct: 225 PRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRILKIGDNGAE 278
>gi|15920641|ref|NP_376310.1| 50S ribosomal protein L3P [Sulfolobus tokodaii str. 7]
gi|42559677|sp|Q975I1.1|RL3_SULTO RecName: Full=50S ribosomal protein L3P
gi|15621424|dbj|BAB65419.1| 50S ribosomal protein L3P [Sulfolobus tokodaii str. 7]
Length = 343
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 164/301 (54%), Gaps = 25/301 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK PR GS G PRKRA+ +++P ++P +L F+GYK GM+HI
Sbjct: 1 MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEP-KLLGFVGYKVGMSHIFMID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KP S + KE V++IETPP++ + + YV P+G + T + +SE++ +
Sbjct: 60 DKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDLLKLI-- 117
Query: 141 NWCKSKKKAFTKYSKQYETDEGK-KSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
+++ T+ E +GK I +L I +RVL TQ + + L +KK
Sbjct: 118 -----QQRKVTRLKIDKEKMKGKLDEINNKLNDI----LYLRVLIATQPKLVPSLGKKKP 168
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
++E+QV GG I +++Y K + V VF++ ++IDIIGVTKGKG++GVV R+GV
Sbjct: 169 EIVEVQVGGGDIKSQLNYVLNILGKPLSVKDVFKEGQLIDIIGVTKGKGFQGVVKRYGVV 228
Query: 260 RLPR--KTHRGLRKVACIGAWHPARVSFT----VARAGQNGYHHRTEMNKKVYKLGKGGQ 313
LPR K +G RKV G SF+ V + GQ GYH RTE NK++ K+
Sbjct: 229 ELPRWHKHRKGSRKVGARGP------SFSTPSYVPQPGQMGYHRRTEYNKRILKISDDPN 282
Query: 314 E 314
E
Sbjct: 283 E 283
>gi|347970124|ref|XP_003436525.1| AGAP003556-PB [Anopheles gambiae str. PEST]
gi|333468789|gb|EGK97067.1| AGAP003556-PB [Anopheles gambiae str. PEST]
Length = 123
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 79/112 (70%), Positives = 95/112 (84%), Gaps = 1/112 (0%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+ F P+KRA+RH+G+VKAFPKDD SKP LTAFL YKAGMTHIVR+ ++PGSK++KKE
Sbjct: 1 MAFYPKKRASRHQGRVKAFPKDDASKPVHLTAFLAYKAGMTHIVREADRPGSKINKKEVV 60
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKS 145
EAVTI+ETPP++VVG VGY++TP G R+L VWAQHLSEE RRRFYKN C S
Sbjct: 61 EAVTILETPPLVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYKN-CPS 111
>gi|188529359|gb|ACD62425.1| ribosomal protein L3 [Drosophila silvestris]
Length = 207
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 96/117 (82%)
Query: 195 KQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVT 254
+QKKAH+MEIQ+NGG++ +KV + EK I V VF +DEM+D +GVTKGKG++GV +
Sbjct: 6 RQKKAHIMEIQLNGGSVEDKVKWVRENLEKPIQVCNVFGQDEMVDCVGVTKGKGFKGVTS 65
Query: 255 RWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
RW +LPRKTH+GLRKV CIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 66 RWHTKKLPRKTHKGLRKVXCIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 122
>gi|448377806|ref|ZP_21560502.1| 50S ribosomal protein L3P [Halovivax asiaticus JCM 14624]
gi|445655750|gb|ELZ08595.1| 50S ribosomal protein L3P [Halovivax asiaticus JCM 14624]
Length = 340
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 156/296 (52%), Gaps = 23/296 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + +++P DD +P L F GYKAGMTH+V + S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFRSWPDDD-GQPT-LQGFAGYKAGMTHVVTVDDAANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF-YKNWCKSKK 147
ET VTI+ETPPM + + Y ++P G + + VWA L +E+ R +
Sbjct: 65 GMETTVPVTIVETPPMAIAALRAYEESPYGQQPVAEVWADELDDELERTLDLPGDDYDRD 124
Query: 148 KAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVN 207
A +++ DEG+ VR + +T +++ + + K +ME ++
Sbjct: 125 AAADEFTAAL--DEGR-------------VDDVRAITYTTPGEIQSVPKTKPDVMETRIG 169
Query: 208 GGTIAEKVDYAYGFFEK---QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
GG++ ++V++ E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 170 GGSVDDRVEFGLDLLEADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGK 229
Query: 265 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 230 HARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLLAIGDGADATVDG 285
>gi|154150075|ref|YP_001403693.1| 50S ribosomal protein L3P [Methanoregula boonei 6A8]
gi|166233155|sp|A7I5N9.1|RL3_METB6 RecName: Full=50S ribosomal protein L3P
gi|153998627|gb|ABS55050.1| ribosomal protein L3 [Methanoregula boonei 6A8]
Length = 337
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 146/292 (50%), Gaps = 19/292 (6%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA K K++P+ S L F GYK GMTH++ +
Sbjct: 3 KINRPRRGSLAFSPRKRAQSPIPKYKSWPEH--SGAPALLGFAGYKVGMTHVLMVDDHKD 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S KE VTIIE P M V + Y K G +L +WA+ L ++ RR
Sbjct: 61 SPTEGKEIMVPVTIIEIPTMKVAALRVYTKDTYGKHALTEIWAEPLDSQLSRRVTS---- 116
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
K Y++ KK L + + LA+TQ M G+ +K LMEI
Sbjct: 117 ---------PKNYDSTAAKKKYSDALAA--GLVAEIYALAYTQPATMSGVPKKVPDLMEI 165
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
+V GG IA++ +YA+G K+I + V + DI +T GKG +G V RWGVT RK
Sbjct: 166 KVAGGDIAKQYEYAFGLLGKEIRLSNVIETGAYADITAITIGKGTQGPVKRWGVTLRKRK 225
Query: 265 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
G R V +G W+P V + V ++GQ GY RTE NK++ K+G+ G E
Sbjct: 226 HSVGGKERHVGTLGPWNPHHVRWEVPQSGQMGYQQRTEFNKRILKIGENGAE 277
>gi|435848748|ref|YP_007310998.1| LSU ribosomal protein L3P [Natronococcus occultus SP4]
gi|433675016|gb|AGB39208.1| LSU ribosomal protein L3P [Natronococcus occultus SP4]
Length = 339
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 149/294 (50%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR+RA+ + ++P DD +P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDEANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTGEFVPELDRVLDLPGDDYDAD 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
A + Y D + VRV+ HT ++ + +KK +ME +V G
Sbjct: 125 AAEDELRGYLED--------------GRIADVRVITHTVPSEVPSIPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+A + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDFALELLADGGEHVMNDVFRAGEYLDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|409731024|ref|ZP_11272574.1| 50S ribosomal protein L3P [Halococcus hamelinensis 100A6]
gi|448724782|ref|ZP_21707287.1| 50S ribosomal protein L3P [Halococcus hamelinensis 100A6]
gi|445784991|gb|EMA35787.1| 50S ribosomal protein L3P [Halococcus hamelinensis 100A6]
Length = 336
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 148/294 (50%), Gaps = 24/294 (8%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+G+ PRKRA+ + ++P DD +P L F GYKAGM+H+V + S
Sbjct: 7 PRKGSMGYSPRKRASSEVARFGSWPDDD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y +TP GLR L W ++ R +S +
Sbjct: 65 GMEQTVPVTVVETPPMRAVALRAYEQTPYGLRPLTETWTDEFHADLDRALDVPDGESDPE 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
AF + + + E +R + HT M + +KK +ME ++ G
Sbjct: 125 AFEEAVQDGDVSE------------------IRAITHTVPGGMANIPKKKPDVMETRIGG 166
Query: 209 GTIAEKVDYAYGFFE--KQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G + E+V++ + + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 167 GDVTERVEFGLDLIAGGGEHNMTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHA 226
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G S G
Sbjct: 227 RQGWRRRIGNLGPWNPSRVRSTVPQQGQMGYHQRTELNKRLVSVGDGDDASAEG 280
>gi|433638933|ref|YP_007284693.1| archaeal ribosomal protein L3 [Halovivax ruber XH-70]
gi|433290737|gb|AGB16560.1| archaeal ribosomal protein L3 [Halovivax ruber XH-70]
Length = 340
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 153/299 (51%), Gaps = 29/299 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA + +++P DD +P L F GYKAGMTH+V + S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFRSWPDDD-GQPT-LQGFAGYKAGMTHVVTVDDAANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF----YKNWCK 144
ET VTI+ETPPM + + Y ++P G + + VWA L +E+ R
Sbjct: 65 GMETTVPVTIVETPPMAIAALRAYEESPYGQQPVAEVWADELDDELERTLDLPGDDYDRD 124
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
+ FT + D+ VR + +T +++ + + K +ME
Sbjct: 125 AAADEFTAALEAGRVDD------------------VRAITYTTPDEIQSVPKTKPDVMET 166
Query: 205 QVNGGTIAEKVDYAYGFFEK---QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
++ GG++ ++V++ E + ++ VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 RIGGGSVDDRVEFGLDLLEADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKR 226
Query: 262 PRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 227 KGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLLAIGDGADATVDG 285
>gi|379003041|ref|YP_005258713.1| 50S ribosomal protein L3 [Pyrobaculum oguniense TE7]
gi|375158494|gb|AFA38106.1| archaeal ribosomal protein L3 [Pyrobaculum oguniense TE7]
Length = 338
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 156/295 (52%), Gaps = 25/295 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GS+G PRKRAA +V+ +P + KP L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPDANLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG--LRSLNTVWAQHLSEEVRRRFYKNW 142
S L+ KE +AVT+++ PP+ V G Y P LRS VWA L + + R
Sbjct: 63 SPLYGKEVVKAVTVLDAPPLFVWGFRLYTLDPTNGYLRSAAEVWAGELPKHLSR------ 116
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
++ + D+ K Q+E+ + A VR L TQ + G+ +K L+
Sbjct: 117 -------VLTLPEKVDVDKQMK----QVEEYRDVAVEVRALVATQ-PHLSGIGKKTPELL 164
Query: 203 EIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
EI + G I E++ +A K + VF +++D+I VTKGKG++GVV R+GVT L
Sbjct: 165 EIPIGGVPNIDERIKFATSLLGKTVSPKDVFSPGQLVDVIAVTKGKGWQGVVKRFGVTIL 224
Query: 262 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
PR K +G R+ IG PA + FT R GQ G+H RTE NK++ K+G+ G E
Sbjct: 225 PRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE 278
>gi|171185278|ref|YP_001794197.1| 50S ribosomal protein L3P [Pyrobaculum neutrophilum V24Sta]
gi|212288414|sp|B1YD88.1|RL3_THENV RecName: Full=50S ribosomal protein L3P
gi|170934490|gb|ACB39751.1| ribosomal protein L3 [Pyrobaculum neutrophilum V24Sta]
Length = 338
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 155/298 (52%), Gaps = 31/298 (10%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GS+G PRKRAA +V+ +P+ + KP L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVEDRPT 62
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG--LRSLNTVWAQHLSEEVRRRFYKNW 142
S L+ KE VT+++ PP+ + G Y P RS+ VWA L +RR
Sbjct: 63 SPLYGKEVVRPVTVLDAPPLFIWGFRLYTLDPTNGYRRSIAEVWAPELPAYIRRVL---- 118
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASV---VRVLAHTQIRKMKGLKQKKA 199
T K + Q++K++++ V VR L TQ + G+ +K
Sbjct: 119 ----------------TLPEKADVDKQMKKVEEFKDVAVDVRALVATQ-PHLSGIGKKTP 161
Query: 200 HLMEIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
L+EI + G ++ E++ +A K + VF +++D+I VTKGKGY+GV+ R+GV
Sbjct: 162 ELLEIPIGGVPSVDERIKFAVSLLGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGV 221
Query: 259 TRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
T LPR K +G R+ IG PA + FT R GQ G+H RTE NK+V K+G G E
Sbjct: 222 TILPRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRVVKIGDNGAE 278
>gi|145592242|ref|YP_001154244.1| 50S ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
gi|212288408|sp|A4WMH5.1|RL3_PYRAR RecName: Full=50S ribosomal protein L3P
gi|145284010|gb|ABP51592.1| LSU ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
Length = 338
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 156/295 (52%), Gaps = 25/295 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GS+G PRKRAA +V+ +P + KP L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPDVNLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG--LRSLNTVWAQHLSEEVRRRFYKNW 142
S L+ KE +AVT+++ PP+ V G Y P LRS VWA L + + R
Sbjct: 63 SPLYGKEVVKAVTVLDAPPLFVWGFRLYTLDPTNGYLRSAAEVWAGELPKHLSR------ 116
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
++ + D+ K Q+E+ + A VR L TQ + G+ +K L+
Sbjct: 117 -------VLTLPEKVDVDKQMK----QVEEYRDVAVEVRALVATQ-PHLSGIGKKTPELL 164
Query: 203 EIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
EI + G I E++ +A K + VF +++D+I VTKGKG++GVV R+GVT L
Sbjct: 165 EIPIGGVPNIDERIKFAISLLGKTVSPKDVFSPGQLVDVIAVTKGKGWQGVVKRFGVTIL 224
Query: 262 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
PR K +G R+ IG PA + FT R GQ G+H RTE NK++ K+G+ G E
Sbjct: 225 PRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE 278
>gi|70606412|ref|YP_255282.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
gi|449066624|ref|YP_007433706.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius N8]
gi|449068898|ref|YP_007435979.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius Ron12/I]
gi|76363364|sp|Q4JB40.1|RL3_SULAC RecName: Full=50S ribosomal protein L3P
gi|68567060|gb|AAY79989.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
gi|449035132|gb|AGE70558.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius N8]
gi|449037406|gb|AGE72831.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius Ron12/I]
Length = 342
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 167/308 (54%), Gaps = 22/308 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK PR GS G PRKRA K +P + +P +L F+GYKAGMTH+
Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKEP-KLLGFIGYKAGMTHVYMID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRSLNTVWAQHLSEEVRRRFY 139
+KP S + KE VTI+E+PP++ + + Y +G L L WA EE ++
Sbjct: 60 DKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWANF--EEGSLKYL 117
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
K S K +K ++ + IQ L I + +R+L TQ + L +K+
Sbjct: 118 KRKITSLKVDSSKMKEKLDL------IQKNLNNI----TYMRLLVSTQPWLVPSLGKKRP 167
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
++EIQ+ GG+I ++++Y KQIPV VF++ ++ DIIGVTKGKG++GV+ R+ V
Sbjct: 168 EIVEIQIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVV 227
Query: 260 RLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
PR K +G RK IGA P+ + + V + GQ G+H RTE NK++ K+G E +
Sbjct: 228 EFPRWHKHRKGSRK---IGARGPSISTPSYVPQPGQLGFHRRTEYNKRIIKIGDNVNEIN 284
Query: 317 T--GITEF 322
GI +
Sbjct: 285 PAGGIVNY 292
>gi|294496017|ref|YP_003542510.1| 50S ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
gi|292667016|gb|ADE36865.1| LSU ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
Length = 337
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 153/282 (54%), Gaps = 19/282 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL F PRKRA H + +++P+ + +P +L F GYK GMTH++ + S
Sbjct: 7 PRRGSLAFSPRKRAKSHIPRFRSWPEAE-GEP-KLQGFAGYKVGMTHVIMIDDAKNSLTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETP + + + Y TP G ++++ W+ +L ++ RR
Sbjct: 65 GAEIAVPVTVIETPQIGIAAIRAYKDTPYGEKTISEAWSANLDGDIGRRI---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
K K Y T++ +++ + +E+ K S +RV+ +T + G+ +KKA +ME V+G
Sbjct: 115 ---KTPKNYNTEKSLENMASLVEEGK--VSEIRVITYTIPSSVSGIPKKKADIMETAVSG 169
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 267
+ K +YA ++ + +F + +ID+ +T+G G EG V RWG+ K R
Sbjct: 170 SDVKAKFEYAKYILGSKVAISDIFSEGNIIDVAAITRGYGTEGPVKRWGIQLAKNKHSRQ 229
Query: 268 -GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
LR+V +G W+P VS+ V + GQ GYH RTE NK++ K+
Sbjct: 230 SSLRQVGTLGPWNPPHVSWRVPQMGQAGYHQRTEYNKRILKV 271
>gi|18313001|ref|NP_559668.1| 50S ribosomal protein L3P [Pyrobaculum aerophilum str. IM2]
gi|42559672|sp|Q8ZW52.1|RL3_PYRAE RecName: Full=50S ribosomal protein L3P
gi|18160502|gb|AAL63850.1| ribosomal protein L3 [Pyrobaculum aerophilum str. IM2]
Length = 338
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 159/298 (53%), Gaps = 31/298 (10%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GS+G PRKRAA +V+ +P+ + KP L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG--LRSLNTVWAQHLSEEVRRRFYKNW 142
S L+ KE +AVT+++ PP+ V G Y P R++ VWA L
Sbjct: 63 SPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELP----------- 111
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASV---VRVLAHTQIRKMKGLKQKKA 199
K+ + T K + QL+K++++ V VR L TQ + G+ +K
Sbjct: 112 ---------KFLHRVLTLPEKLDVDKQLKKVEEFRDVAVDVRALVATQ-PHLSGIGKKTP 161
Query: 200 HLMEIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
L+EI + G ++ E++++A K + VF +++D+I VTKGKGY+GV+ R+GV
Sbjct: 162 ELLEIPIGGVPSVDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVIKRFGV 221
Query: 259 TRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
T LPR K +G R+ IG PA V FT R GQ G+H RTE NK++ K+G+ G E
Sbjct: 222 TILPRWHKHRKGHRRTGTIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE 278
>gi|448298465|ref|ZP_21488494.1| 50S ribosomal protein L3P [Natronorubrum tibetense GA33]
gi|445591661|gb|ELY45862.1| 50S ribosomal protein L3P [Natronorubrum tibetense GA33]
Length = 339
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 150/294 (51%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR+RA + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G++ + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEATPYGMKPVTEVWTDEFVTELDRVLDVPGDDYDAD 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
A + Y +EG+ VRV+ HT + + +KK +ME +V G
Sbjct: 125 AAEDELRGY-LEEGR-------------VDDVRVITHTVPGSIPSMPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ ++VD+A + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEDRVDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|170291100|ref|YP_001737916.1| 50S ribosomal protein L3P [Candidatus Korarchaeum cryptofilum OPF8]
gi|170175180|gb|ACB08233.1| ribosomal protein L3 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 332
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 155/281 (55%), Gaps = 22/281 (7%)
Query: 30 RHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 89
RHGSL + PRKRAA + +++P+ KP L AF GYK GM H++ ++PG
Sbjct: 4 RHGSLQYYPRKRAATQKALFRSYPELSVDKPT-LVAFPGYKVGMVHVLLKEDRPGKLNLG 62
Query: 90 KETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKA 149
++ A T+IETPP+ +VG Y + GL+ L T + +KK
Sbjct: 63 QQITLASTVIETPPIEIVGFRAYKEGYYGLKPLTTA-----------------LRIEKK- 104
Query: 150 FTKYSKQYETDEGKKSIQAQLEKIKKY-ASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
S+ EG + L K++ S +R+L++T+ + G+ +KK MEI V G
Sbjct: 105 -DPISRTLTIGEGVDNFNEALSKLEGAKVSEIRILSYTR-PDLAGIHKKKPEFMEIPVKG 162
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
G + E++++A Q+ VD+VF+ +++D+ VTKG G++GVV R+G+ L K +G
Sbjct: 163 GEMEERIEFAKSLVGSQLKVDSVFKVGQLVDVTAVTKGHGWQGVVRRFGIELLRHKAGKG 222
Query: 269 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+V +G+ HP V++ V RAGQ GYH RTE NK++ +G
Sbjct: 223 RWRVGSLGSRHPPYVTWRVPRAGQTGYHKRTEYNKRILMMG 263
>gi|448315112|ref|ZP_21504765.1| 50S ribosomal protein L3P [Natronococcus jeotgali DSM 18795]
gi|445612371|gb|ELY66097.1| 50S ribosomal protein L3P [Natronococcus jeotgali DSM 18795]
Length = 339
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 149/294 (50%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR+RA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G + L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDRVLDLPGDDYDAD 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
A + Y D + VRV+ HT ++ + +KK +ME +V G
Sbjct: 125 AAEDELRGYLED--------------GRIADVRVITHTVPSEVPSIPKKKPDVMETRVGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E++++A + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERLEFALEVLADGGEHVLNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDG 284
>gi|159040903|ref|YP_001540155.1| 50S ribosomal protein L3P [Caldivirga maquilingensis IC-167]
gi|212288253|sp|A8MB75.1|RL3_CALMQ RecName: Full=50S ribosomal protein L3P
gi|157919738|gb|ABW01165.1| ribosomal protein L3 [Caldivirga maquilingensis IC-167]
Length = 347
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 162/295 (54%), Gaps = 22/295 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GS+ + PRKRA+ +++ +P D KP L F+GYKAGM H+ ++
Sbjct: 4 KIHRPRRGSMAYYPRKRASDIVPRIRNWPVIDLGKPT-LLGFVGYKAGMVHVTVVDDRKT 62
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG--LRSLNTVWAQHLSEEVRRRFYKNW 142
S KE +AVT++ETPP+ VVG+ Y P L S+ W ++ EVR+ +
Sbjct: 63 SPFFGKELVKAVTVVETPPLYVVGLRAYAINPLKAELVSVGEAWV-NIPNEVRKYIARR- 120
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
++++TD+ +Q L+ + S ++V+A TQ K G+ +K ++
Sbjct: 121 -------IPTLPEKFDTDKALADLQGLLDSV----SYIKVIAMTQPYK-AGVGKKTPEVL 168
Query: 203 EIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
EI V G TI E+ YA G K++ VF+ +++D+IGVTKGKG +GV+ R+GV L
Sbjct: 169 EIPVGGVPTIDEQFKYASGLLGKEVKPTDVFKPGQLVDVIGVTKGKGTQGVIKRFGVKEL 228
Query: 262 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
PR K +G R+ +G PA V +T R GQ G+H RTE NK++ K+ G E
Sbjct: 229 PRWHKHRKGSRRTGTVGP-KPA-VMYTQPRMGQMGFHRRTEYNKRILKISDNGSE 281
>gi|354610537|ref|ZP_09028493.1| ribosomal protein L3 [Halobacterium sp. DL1]
gi|353195357|gb|EHB60859.1| ribosomal protein L3 [Halobacterium sp. DL1]
Length = 324
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 147/289 (50%), Gaps = 24/289 (8%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+GF PRKRA + ++P DD L F GYKAGMTH+V +K S ET
Sbjct: 1 MGFSPRKRAESEVPRFNSWPADDGQ--VGLQGFAGYKAGMTHVVLVDDKANSPSEGMETS 58
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
VT++ETPPM V Y TP G + L VWA + E++ R A +
Sbjct: 59 VPVTVVETPPMRAAAVRVYEDTPYGKKPLTEVWADDVHEDLDR------------ALSVP 106
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
+TDE + LE + + +RV+ HT + + +K+ +ME +V GG++ E
Sbjct: 107 QSGGDTDE----LTEMLE--NEDVADIRVITHTVPGDLSSIPKKEPDIMETRVGGGSLQE 160
Query: 214 KVDYAYGFFEKQI--PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--L 269
+ D+A E VF+ E DI GVTKGKG +G V RWGV + K R
Sbjct: 161 RADFAAELLEDGGVHEFGDVFRAGEFTDIAGVTKGKGTQGPVKRWGVQKRKGKHARQGWR 220
Query: 270 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+G + G
Sbjct: 221 RRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDFGEGDDVNAAG 269
>gi|193084317|gb|ACF09976.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 358
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 27/296 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+G+ PRKRA R G++ ++P D S+ R+ F G+KAGMTH++ P S
Sbjct: 7 PRRGSMGYSPRKRAIRQYGRISSWPDSDSSE-VRVQGFAGWKAGMTHVLVRDNNPHSPSA 65
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
++E +AVT++E PPM V+ + GY TP G+++ WA
Sbjct: 66 RQEVRKAVTVVEAPPMCVLAIRGYRMTPYGMQTAGEAWAD----------VDGGPDGLTP 115
Query: 149 AFTKYSK-QYETDEGKK--------------SIQAQLEKIKKYASV-VRVLAHTQIRKMK 192
F S+ +++ DEG+K S A +E ++ +R++ TQ +K
Sbjct: 116 RFANQSRGEHDRDEGRKPSKRGGRIPSRNGNSPDAAMESLQNADLCEIRLIVSTQPALVK 175
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
+ K +ME+ + GG + K+++A I +D V+Q + ID++GVTKGKG++G
Sbjct: 176 SVTSKTPEIMEVALVGGDNSSKMEWARERLGGTISLDDVYQTGQEIDVVGVTKGKGWQGS 235
Query: 253 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
+ RWG+ L K + R+ +G + V T+ +AGQ GYH RTE+NK++ ++
Sbjct: 236 IKRWGIKLLSHKNSKRRRQGGNMGDFGTRYVRKTIRQAGQVGYHQRTELNKRILRI 291
>gi|383625045|ref|ZP_09949451.1| 50S ribosomal protein L3P [Halobiforma lacisalsi AJ5]
gi|448697501|ref|ZP_21698541.1| 50S ribosomal protein L3P [Halobiforma lacisalsi AJ5]
gi|445781454|gb|EMA32310.1| 50S ribosomal protein L3P [Halobiforma lacisalsi AJ5]
Length = 339
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 152/294 (51%), Gaps = 20/294 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PRKRA+ + ++P D +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRASSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTI+ETPPM V + Y TP G+ + VW + E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTPYGMNPVTEVWTDEFAPELDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y++D ++ LE + VR + HT ++ + +KK +ME ++ G
Sbjct: 113 VLDLPGDDYDSDAAADELRGLLENGR--VDDVRAITHTVPSEVPSVPKKKPDVMETRIGG 170
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+ + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDERVDFGLELLGDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+G + G
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDMGEGADATVDG 284
>gi|374325726|ref|YP_005083926.1| 50S ribosomal protein L3P [Pyrobaculum sp. 1860]
gi|356640995|gb|AET31674.1| 50S ribosomal protein L3P [Pyrobaculum sp. 1860]
Length = 338
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 157/298 (52%), Gaps = 31/298 (10%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GS+G PRKRAA +V+ +P + +P L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRNWPDVNLGRPT-LLGFAAYKAGMVHAVVVDDRPT 62
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG--LRSLNTVWAQHLSEEVRRRFYKNW 142
S L+ KE AVT+++ PP+ V GV Y P R++ VW+ L
Sbjct: 63 SPLYGKEVVRAVTVLDAPPLYVWGVRLYTLDPANGYRRAVAEVWSAELP----------- 111
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASV---VRVLAHTQIRKMKGLKQKKA 199
KY + T K ++ Q++K++++ V VR L Q + G+ +K
Sbjct: 112 ---------KYLHRVLTLPEKVDVEKQMKKLEEFRDVAVDVRALVAMQ-PHLSGIGKKTP 161
Query: 200 HLMEIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
L+EI V G +I E++ YA K + VF +++D+I VTKGKGY+GVV R+GV
Sbjct: 162 ELLEIPVGGVPSIDERIKYAVSLLGKTVSPKDVFTAGQLVDVIAVTKGKGYQGVVKRFGV 221
Query: 259 TRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
T LPR K +G R+ IG PA + FT R GQ G+H RTE NK++ K+G+ G E
Sbjct: 222 TILPRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE 278
>gi|84489708|ref|YP_447940.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
gi|109893523|sp|Q2NFV6.1|RL3_METST RecName: Full=50S ribosomal protein L3P
gi|84373027|gb|ABC57297.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
Length = 337
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 156/288 (54%), Gaps = 30/288 (10%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 87
PR GS+ F PRKR AR +V +P+ D + L AF GYK GMTH+ + GS
Sbjct: 6 QPRKGSVAFSPRKRVARETPRVSTWPELDEAG---LLAFAGYKVGMTHVTALDSRKGSPT 62
Query: 88 HKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQ-HLSEEVRRRFYKNWCKSK 146
E VTI+E PP++V+G+ Y KT GL++L V A +L +E+ R+
Sbjct: 63 ENMELSVPVTILEAPPLVVLGIRAYTKTTYGLKTLTDVIANDNLDDELSRKI-------- 114
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIK-KYASV--VRVLAHTQIRKMKGLKQKKAHLME 203
+ K+ I+A++E+++ K + +RVL HT+ K+ + +KK ++E
Sbjct: 115 --SVPKFD----------DIEAKIEELRNKIDDIDEIRVLIHTK-PKLTSVPKKKPEVLE 161
Query: 204 IQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLP 262
+ G ++ +K++YA K+I VFQ+ E D I TKGKG +G V R+GV +
Sbjct: 162 FGLGGKSVEDKLEYAISILGKEITPQDVFQEGEYTDAIATTKGKGVQGPVKRFGVRIQYG 221
Query: 263 RKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+ G+ R V IG W P R +TVA GQ GYH RTE NKK+ K+G
Sbjct: 222 KAARSGIERHVGSIGPWTPNRTMWTVAMQGQMGYHKRTEYNKKLLKIG 269
>gi|150401236|ref|YP_001325002.1| 50S ribosomal protein L3P [Methanococcus aeolicus Nankai-3]
gi|166233154|sp|A6UV68.1|RL3_META3 RecName: Full=50S ribosomal protein L3P
gi|150013939|gb|ABR56390.1| ribosomal protein L3 [Methanococcus aeolicus Nankai-3]
Length = 333
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 153/292 (52%), Gaps = 25/292 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA R K++++P+ + +L AF YKAG TH + P
Sbjct: 4 KRNRPRRGSLAFSPRKRAKRPVPKIRSWPERET---VKLLAFPVYKAGTTHALYKENNPK 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S ++ VT++E P + + G+ Y K +GL++L VWA +E+ R+ N K
Sbjct: 61 SPNADQDVFTPVTVMEAPDITIAGIRAYGKDTKGLKALTEVWADSFDKELGRKI--NLPK 118
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
K K L+++ VR + HT K L +KK ++EI
Sbjct: 119 EPKANTEK-----------------LDEVADKIVEVRAIVHTN-PKDTNLPKKKPEIIEI 160
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 263
++ G I++ + YA K++ ++ VF E ID + +TKGKG++G V RWG+ + +
Sbjct: 161 KIGGKNISDIIAYAKDIIGKKLSINDVFTGGEFIDTVAITKGKGFQGPVKRWGIKIQFGK 220
Query: 264 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
++G+ R IG W P R+ +TV AGQ G+H RTE NK++ K+G+ G E
Sbjct: 221 HQNKGVGRHTGSIGPWTPKRIMWTVPMAGQVGFHQRTEYNKRILKIGENGSE 272
>gi|448503712|ref|ZP_21613341.1| 50S ribosomal protein L3P [Halorubrum coriense DSM 10284]
gi|445691913|gb|ELZ44096.1| 50S ribosomal protein L3P [Halorubrum coriense DSM 10284]
Length = 338
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 150/294 (51%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA +++++P+DD P L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSLGYGPRTRAESEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETP M V V Y TP G + + VWA EE+ R
Sbjct: 65 GMEEAVPVTVVETPQMYAVAVRAYENTPYGQKPVEEVWATEFHEELDRALD--------- 115
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ +E D ++A L+ RV+ HT + + +KK +ME +V G
Sbjct: 116 --LPAEETFEAD--ADELRALLDDDVVDDV--RVITHTAPSDLSNVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEKQIP--VDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+VD+A + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERVDFALDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+G S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDASVDG 283
>gi|448737862|ref|ZP_21719895.1| 50S ribosomal protein L3P [Halococcus thailandensis JCM 13552]
gi|445802824|gb|EMA53125.1| 50S ribosomal protein L3P [Halococcus thailandensis JCM 13552]
Length = 336
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 147/294 (50%), Gaps = 24/294 (8%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA + ++P DD +P L F GYKAGM+H+V + S
Sbjct: 7 PRKGSLGYGPRTRAHSEVPRFGSWPDDD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y +TP GLR L W +++ R +S
Sbjct: 65 GMEQTVPVTVVETPPMRAVALRAYEQTPYGLRPLTETWTDEFHDDLDRALDVPDGQSDPG 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
AF + + E E +R + HT +M + +K+ +ME +V+G
Sbjct: 125 AFEEAVENNEIGE------------------IRAITHTVPGEMANVPKKRPDVMETRVSG 166
Query: 209 GTIAEKVDYAYGFFE--KQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
+ E+V++ + + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 167 SDLDERVEFGLDLIAGGGEHELTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHF 226
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G S G
Sbjct: 227 RQGYKRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVSVGDGDDASAEG 280
>gi|126465913|ref|YP_001041022.1| 50S ribosomal protein L3P [Staphylothermus marinus F1]
gi|212288413|sp|A3DNA4.1|RL3_STAMF RecName: Full=50S ribosomal protein L3P
gi|126014736|gb|ABN70114.1| LSU ribosomal protein L3P [Staphylothermus marinus F1]
Length = 395
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 181/345 (52%), Gaps = 63/345 (18%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFP------------------KDDPSKPCR 62
M HRK+ PRHGSLG PRKRAA+ +++++P K KP
Sbjct: 1 MGHRKYSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEAVNKGIAPKPV- 59
Query: 63 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTP-RGLRS 121
L ++ YKAGM+H + ++P + KE VT+++ PP++++G+ GY P GL S
Sbjct: 60 LLGYVAYKAGMSHAIIIDDRPHTFTSGKEIAIPVTVLDAPPILILGLRGYKIHPMHGLLS 119
Query: 122 LNTVWAQHL--------------------SEEVRRRFYK-----NWCKSKKKAFTKYSKQ 156
VW + ++++ R++ K N K + ++Y +
Sbjct: 120 FGEVWRSPVEALKELYEKIYSDNPFINLGAKDIVRKYLKGLRKVNPGLVKPEPHSEYGFK 179
Query: 157 YETDEGKKSIQ----AQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIA 212
+ + K+ ++ A+L I+ AS + VL+ G+ +KK ++EI++ GGT++
Sbjct: 180 FLENNWKEKLERLKAAELADIRVIASTIPVLS--------GIGKKKPEIIEIKIGGGTLS 231
Query: 213 EKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLR 270
E++DYA + VD VF++ + IDIIGVTKGKG++GV+ R+GV LPR K +G R
Sbjct: 232 ERIDYAEKLLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSR 291
Query: 271 KVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKVYKLGKGGQE 314
K IG+ P + + + GQ G+H RTE NK++ K+G G E
Sbjct: 292 K---IGSRSPGFGTMSETPQPGQMGFHRRTEYNKRIIKIGINGWE 333
>gi|345005655|ref|YP_004808508.1| 50S ribosomal protein L3 [halophilic archaeon DL31]
gi|344321281|gb|AEN06135.1| ribosomal protein L3 [halophilic archaeon DL31]
Length = 338
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 153/296 (51%), Gaps = 25/296 (8%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLGF PR RAA +++++P+D+ S P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRTRAASEVPRIRSWPEDEGS-PA-LQGFAGYKAGMTHVVMVNDEEDSARE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPP+ V V Y T G + VW +E+ R
Sbjct: 65 GMEESVPVTVVETPPIRAVAVRAYEDTAYGKKPAAEVWTGEFHDELDRALD--------- 115
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASV--VRVLAHTQIRKMKGLKQKKAHLMEIQV 206
+E D +L + + SV +RV+ HT ++ + +K+ +ME +V
Sbjct: 116 --LPEENDFEGD------ADELRTLVEEGSVDDLRVITHTTPSELANIPKKEPDVMETRV 167
Query: 207 NGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
GG++ E+VD+A E + VF+ + +D G+TKGKG +G V RWGV + K
Sbjct: 168 GGGSLQERVDFALDLVEDGGEHEFGDVFRAGQYLDASGITKGKGTQGPVKRWGVQKRKGK 227
Query: 265 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+G S G
Sbjct: 228 HARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDASVDG 283
>gi|193083756|gb|ACF09443.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 358
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 159/297 (53%), Gaps = 29/297 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+G+ PRKRA R G++ ++P D S+ R+ F G+KAGMTH++ P S
Sbjct: 7 PRRGSMGYSPRKRAIRQYGRISSWPDSDSSE-VRVQGFAGWKAGMTHVLVRDNNPHSPSA 65
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLS--EEVRRRFYKNWCKSK 146
++E +AVT++E PPM V+ + GY T G+++ WA + + RF
Sbjct: 66 RQEVRKAVTVVEAPPMCVLAIRGYRMTSYGMQTAGEAWADADGGPDGLMPRF-------- 117
Query: 147 KKAFTKYSKQYETDEGKK--------------SIQAQLEKIKKYASV-VRVLAHTQIRKM 191
+ +++ DEG+K S A +E ++ +R++ TQ +
Sbjct: 118 ---ANQSQGEHDRDEGRKPSKRGGRIPSRNGNSPDAAMESLQNADLCEIRLIVSTQPALV 174
Query: 192 KGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEG 251
K + K +ME+ + GG + K+++A +I +D V+Q + ID++G+TKGKG++G
Sbjct: 175 KSVPSKTPEIMEVALVGGDNSSKLEWAREKLGGEISLDDVYQTGQEIDVVGITKGKGWQG 234
Query: 252 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
+ RWG+ L K + R+ +G + V T+ +AGQ GYH RTE+NK++ ++
Sbjct: 235 SIKRWGIKLLSHKNSKRRRQGGNMGDFGTGYVRKTIRQAGQVGYHQRTELNKRILRI 291
>gi|448726794|ref|ZP_21709186.1| 50S ribosomal protein L3P [Halococcus morrhuae DSM 1307]
gi|445793840|gb|EMA44411.1| 50S ribosomal protein L3P [Halococcus morrhuae DSM 1307]
Length = 336
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 146/294 (49%), Gaps = 24/294 (8%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA + ++P DD +P L F GYKAGM+H+V + S
Sbjct: 7 PRKGSLGYGPRTRAHSEVPRFGSWPDDD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y +TP GLR L W +++ R +S
Sbjct: 65 GMEQTVPVTVVETPPMRAVALRAYEQTPYGLRPLTETWTDEFHDDLDRALDVPDGESDPG 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
AF + + E E +R + HT +M + +K+ +ME +V G
Sbjct: 125 AFEEAVENNEIGE------------------IRAITHTVPGEMANVPKKRPDVMETRVGG 166
Query: 209 GTIAEKVDYAYGFFE--KQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
+ E+V++ + + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 167 SDLDERVEFGLDLIAGGGEHELTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHF 226
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G G S G
Sbjct: 227 RQGYKRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVSVGDGDDASAEG 280
>gi|257053359|ref|YP_003131192.1| 50S ribosomal protein L3P [Halorhabdus utahensis DSM 12940]
gi|256692122|gb|ACV12459.1| ribosomal protein L3 [Halorhabdus utahensis DSM 12940]
Length = 338
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 147/286 (51%), Gaps = 21/286 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA + ++P DD +P + F GYKAGM+H+V ++P S
Sbjct: 7 PRKGSLGYGPRTRATSETPRFNSWP-DDEGQPG-VQGFAGYKAGMSHVVVINDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y TP GLR L VW E++ R
Sbjct: 65 GMEETVPVTVVETPPMRAVALRAYEDTPYGLRPLTEVWTDEFHEDLDRAI---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ + D + I+ L+ + VR++ HT + + + K +ME +V G
Sbjct: 115 ---DLPAEQDRDGAEAQIRDALDAGR--LGDVRLITHTVPGDLPSVPKNKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++A+++++ + + VF+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSLADRLEHGLELVADGGEYAMTDVFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGD 275
>gi|335437513|ref|ZP_08560289.1| 50S ribosomal protein L3P [Halorhabdus tiamatea SARL4B]
gi|334895861|gb|EGM34024.1| 50S ribosomal protein L3P [Halorhabdus tiamatea SARL4B]
Length = 338
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 147/286 (51%), Gaps = 21/286 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA + ++P DD +P + F GYKAGM+H+V ++P S
Sbjct: 7 PRKGSLGYGPRTRATSETPRFNSWP-DDEGQPG-VQGFAGYKAGMSHVVVINDEPNSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y TP GLR L VW E++ R
Sbjct: 65 GMEETVPVTVVETPPMRAVALRAYEDTPYGLRPLTEVWTDEFHEDLDRAI---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ + D + I+ L+ + VR++ HT + + + K +ME +V G
Sbjct: 115 ---DLPAEQDRDGAEAQIRDALDAGR--LGDVRLITHTVPGDLPSVPKNKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++A+++++ + + VF+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSLADRLEHGLELVADGGEYAMTDVFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGD 275
>gi|448489440|ref|ZP_21607663.1| 50S ribosomal protein L3P [Halorubrum californiensis DSM 19288]
gi|445694812|gb|ELZ46930.1| 50S ribosomal protein L3P [Halorubrum californiensis DSM 19288]
Length = 338
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 148/294 (50%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA +++++P+DD P L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSLGYGPRTRADSEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETP M V V Y TP G + + VWA EE+ R
Sbjct: 65 GMEEAVPVTVVETPQMYAVAVRAYENTPYGQKPVEEVWATEFHEELDRAL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ +E ++A L+ RV+ HT + + +KK +ME +V G
Sbjct: 115 ---DLPAEETFEEDADELRALLDDDVVDDV--RVITHTAPSDLSNVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEKQIP--VDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+ D+A + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERADFALDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+G S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDASVDG 283
>gi|448426507|ref|ZP_21583356.1| 50S ribosomal protein L3P [Halorubrum terrestre JCM 10247]
gi|448452123|ref|ZP_21593143.1| 50S ribosomal protein L3P [Halorubrum litoreum JCM 13561]
gi|448484334|ref|ZP_21606041.1| 50S ribosomal protein L3P [Halorubrum arcis JCM 13916]
gi|448508628|ref|ZP_21615579.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 9100]
gi|448517689|ref|ZP_21617263.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 10118]
gi|445679387|gb|ELZ31854.1| 50S ribosomal protein L3P [Halorubrum terrestre JCM 10247]
gi|445697254|gb|ELZ49324.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 9100]
gi|445705904|gb|ELZ57792.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 10118]
gi|445809767|gb|EMA59805.1| 50S ribosomal protein L3P [Halorubrum litoreum JCM 13561]
gi|445820109|gb|EMA69938.1| 50S ribosomal protein L3P [Halorubrum arcis JCM 13916]
Length = 338
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 147/294 (50%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA +++++P+DD P L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSLGYGPRTRADSEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETP M V V Y TP G + + VWA EE+ R
Sbjct: 65 GMEEAVPVTVVETPQMYAVAVRAYENTPYGQKPVEEVWATEFHEELDRAL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ +E ++A L+ RV+ HT + + +KK +ME +V G
Sbjct: 115 ---DLPAEETFEEDADELRALLDDDVVDDV--RVITHTAPSDLSNVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEKQIP--VDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+ D+A VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERADFALDLVADGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+G S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDASVDG 283
>gi|336477161|ref|YP_004616302.1| 50S ribosomal protein L3 [Methanosalsum zhilinae DSM 4017]
gi|335930542|gb|AEH61083.1| ribosomal protein L3 [Methanosalsum zhilinae DSM 4017]
Length = 337
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 139/288 (48%), Gaps = 19/288 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL F PRKRA H K +++P+ + +L F GYK GMTH++ S
Sbjct: 7 PRRGSLAFSPRKRAKSHIAKFRSWPES--AGEPKLQDFAGYKVGMTHVIMIDNVKNSLTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E TIIETP + V + Y + G + + WA L E + R N C
Sbjct: 65 GTEISVPATIIETPAIRVAAIRAYAEDVYGKKPVYEAWASDLDESLSR----NIC----- 115
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
K Y T I +E+ A+ +RV +T + + G+ +KK LME ++G
Sbjct: 116 ----LPKDYSTQNALDKISGLIEE--GNATDIRVATYTLPKNITGIPKKKPDLMETSISG 169
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
+ K +YA ++ + +F ++D+ +T GKG +G V RWG+ K R
Sbjct: 170 NDVRAKFEYASSILGNEVEISDIFDSGNLVDVASITTGKGTQGPVKRWGIQMAKHKHSRA 229
Query: 269 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
LR+V +G W PA VS+ V + GQ GYH RTE NK++ K+ E
Sbjct: 230 GSLRQVGTLGPWRPAHVSWRVPQMGQMGYHQRTEYNKRILKMSSDADE 277
>gi|193084205|gb|ACF09869.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
KM3-136-D10]
Length = 342
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 158/286 (55%), Gaps = 23/286 (8%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
P+ GS+ F PRKRA R G+VK++P + + ++ F GYKAGM+H++ E PGS
Sbjct: 7 PKRGSMAFGPRKRARRQTGRVKSWPSNGNGE-VKIQGFAGYKAGMSHVLIRDENPGSPSA 65
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWA--QHLSEE----VRRRFYKNW 142
+E +AVTI+ETPP+ ++G+ GY +T G ++ WA + ++E VRR +N
Sbjct: 66 GQEIRKAVTIVETPPLQILGIRGYHQTYYGKQTAGEAWASGEEIAEAQPNLVRRVPARN- 124
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
++T+E +++ EK + VR++ TQ K+K + K ++M
Sbjct: 125 -------------THDTEEHITALKEMAEKGQ--LCEVRLIVSTQPSKVKSIPTKTPNIM 169
Query: 203 EIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 262
E+ +NG I ++ +A + + V VF +D+I VTKGKG++G + RWG+ L
Sbjct: 170 ELGLNGSDITSRIAWAEERLGQTLKVSDVFSNGNDLDVIAVTKGKGWQGSIKRWGIKLLS 229
Query: 263 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
K + R+ +G + V T+ +AGQ GYH RTE NKKV ++
Sbjct: 230 HKNSKRRRQGGNMGDFGTGYVRKTIRQAGQTGYHQRTEYNKKVIRI 275
>gi|47079404|gb|AAT10147.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 358
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 165/297 (55%), Gaps = 11/297 (3%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
P+ GS+GF PRKRA R G++ ++P+ + S+ R+ F G+KAGMTH++ P S
Sbjct: 7 PKRGSMGFSPRKRAIRPFGRITSWPETESSE-IRVQGFAGWKAGMTHVLMRDTNPHSTSA 65
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLS--EEVRRRFY------K 140
+E +AVT++E PPM V+ V GY TP G+++ +WA S + + RF +
Sbjct: 66 GQEIRKAVTVVEVPPMKVLAVRGYHMTPYGMQTAGEIWADSSSGPDGLMPRFANQTRGDR 125
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+ + +K A K + + EG + A VR++ TQ +K + K
Sbjct: 126 DIEEGRKPA--KRAGRIPVREGGMNGDALAALTDSNLCEVRLIVATQPALVKSVPSKTPV 183
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+ + GG K+++A+ +I +D V++ + +D++G+TKGKG++GV+ R+GV
Sbjct: 184 IMEVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELDVVGITKGKGWQGVIKRFGVKL 243
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHT 317
L K + R++ +G + V T+ +AGQ GYH RTE+NK++ ++ G+ T
Sbjct: 244 LSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQMGYHKRTELNKRILRISNPGESDVT 300
>gi|77024938|gb|ABA61365.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 338
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 156/290 (53%), Gaps = 20/290 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
P+ GS+GF PRKRA R G+VK++P+ D S R+ F G+KAGMTH++ PGS
Sbjct: 7 PKKGSMGFGPRKRANRPYGRVKSWPETD-SDEVRVQGFAGWKAGMTHVMMRDLNPGSPSA 65
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWA--QHLSEEVRRRFYKNWCKSK 146
E +AVT++E PPM V+ V GY TP G ++ WA LS+ + + + +
Sbjct: 66 GAEVRKAVTVVEVPPMRVLAVRGYKMTPYGKQTAGEAWASADKLSDVIPSLPRRIPERKE 125
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
A K E+D + VR++ +Q K+ + K +ME+ +
Sbjct: 126 HDANAHLDKLRESD----------------LAEVRLIVSSQPDKVSAVGSKSPEIMEMGL 169
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
GG + ++D+A +++ ++ VF+ ID+IGVTKG G +GVV R+GV L K
Sbjct: 170 TGGDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGVTKGYGNQGVVRRFGVKLLSHKNS 229
Query: 267 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
+ R++ +G + V T+ +AGQ GYH RTE NK++ ++ G +ES
Sbjct: 230 KRRRQIGNMGDFGTGYVRKTIRQAGQTGYHQRTEYNKRILRIA-GEEESQ 278
>gi|332796528|ref|YP_004458028.1| 50S ribosomal protein L3 [Acidianus hospitalis W1]
gi|332694263|gb|AEE93730.1| ribosomal protein L3 [Acidianus hospitalis W1]
Length = 361
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 160/300 (53%), Gaps = 23/300 (7%)
Query: 19 RRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR 78
R + HRK PR GS GF PRKRA +++P+ S P L F+GYK GMTH+
Sbjct: 21 RGLGHRKLASPRRGSSGFRPRKRAEELLPTPRSWPRISSSNPI-LLGFVGYKVGMTHVYY 79
Query: 79 DVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRSLNTVWAQHLSEEVRRR 137
+ GS + KE VT+IETPP++ + + Y+ +G L W L +E+ R+
Sbjct: 80 INDIKGSSEYGKEVFTPVTVIETPPIIPIALRAYILGSKGEPEVLTDYWTPELPQEITRK 139
Query: 138 FYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQK 197
K+ +K K +E I++ L I +R + TQ + + L +K
Sbjct: 140 I-KSLKVNKDKL----------NEFLDKIKSNLNNI----LYLRAIIATQPKLVPALGKK 184
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
K ++EIQV GG + +++Y K + V +F++ +++DIIGVTKGKG++GV+ R+
Sbjct: 185 KPEIVEIQVGGGDTSAQLNYLLDILGKPVNVTDIFKEGQLVDIIGVTKGKGFQGVIKRYS 244
Query: 258 VTRLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKVYKLGKGGQE 314
V LPR K +G RKV G P+ + + V + GQ G+H RTE NK++ K+ QE
Sbjct: 245 VMELPRWHKHRKGSRKVGTKG---PSLGTPSYVPQPGQLGFHRRTEYNKRILKISTNPQE 301
>gi|315425680|dbj|BAJ47337.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
subterraneum]
gi|315427562|dbj|BAJ49161.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
subterraneum]
gi|343484512|dbj|BAJ50166.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
subterraneum]
Length = 320
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 28/289 (9%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M RK+ PRHGSL +LPR RAA +VK +P + + F+GYK GMT +
Sbjct: 1 MGRRKYSRPRHGSLAYLPRGRAASILPRVKHWPDGE-----GVLGFIGYKVGMTMVHYID 55
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
P S E +A T++ PP+ V+G+ Y L ++ W++ + E+V+RR
Sbjct: 56 NTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGKYWSKEVPEDVKRR--- 112
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
F E + + + VR++ TQ R + K
Sbjct: 113 ------NPTFRPMPSAEEIGQLEDDVDE-----------VRIVVATQPRLVGA--GKAPR 153
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ EI++ GG AE ++ A K + V VF++ + +D+I VTKGKG++GVV R+GV+
Sbjct: 154 IAEIKI-GGKPAEALEKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSI 212
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
L RK+ + R VA IG W+P V +TV R+GQ GYH RTE NK++ ++G
Sbjct: 213 LQRKSRKTRRGVAAIGPWNPHYVMYTVPRSGQMGYHRRTEFNKRILRIG 261
>gi|315425735|dbj|BAJ47391.1| large subunit ribosomal protein L3, partial [Candidatus
Caldiarchaeum subterraneum]
Length = 289
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 28/289 (9%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M RK+ PRHGSL +LPR RAA +VK +P + + F+GYK GMT +
Sbjct: 1 MGRRKYSRPRHGSLAYLPRGRAASILPRVKHWPDGE-----GVLGFIGYKVGMTMVHYID 55
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
P S E +A T++ PP+ V+G+ Y L ++ W++ + E+V+RR
Sbjct: 56 NTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGKYWSKEVPEDVKRR--- 112
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
F E + + + VR++ TQ R + K
Sbjct: 113 ------NPTFRPMPSAEEIGQLEDDVDE-----------VRIVVATQPRLVGA--GKAPR 153
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ EI++ GG AE ++ A K + V VF++ + +D+I VTKGKG++GVV R+GV+
Sbjct: 154 IAEIKI-GGKPAEALEKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSI 212
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
L RK+ + R VA IG W+P V +TV R+GQ GYH RTE NK++ ++G
Sbjct: 213 LQRKSRKTRRGVAAIGPWNPHYVMYTVPRSGQMGYHRRTEFNKRILRIG 261
>gi|352682917|ref|YP_004893441.1| 50S ribosomal protein L3p [Thermoproteus tenax Kra 1]
gi|350275716|emb|CCC82363.1| 50S ribosomal protein L3p [Thermoproteus tenax Kra 1]
Length = 339
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 159/311 (51%), Gaps = 31/311 (9%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GS+G PRKRA+ +V+ +P KP L F YK GM H V +K
Sbjct: 4 KIHRPRRGSMGVYPRKRASDIVPRVRTWPDPQLGKPS-LLGFAAYKVGMIHAVLVEDKQT 62
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTP-RGLR-SLNTVWAQHLSEEVRRRFYKNW 142
S L KE +A T++E PP+ ++ + Y P G R S+ VW + +V R
Sbjct: 63 SPLFGKEIVKAATVLEAPPLKILAIRLYSLDPTNGYRKSIGEVWTPEIPRDVAR------ 116
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
K Y ++ K L+++K A VR L TQ R + G+ +K L+
Sbjct: 117 ------VVKTLPKSYNLEDRLK----LLDQLKPAAVEVRALVSTQPR-LAGIGKKTPELL 165
Query: 203 EIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
EI + G +I E++ Y K++ + VF + ++ID+IG+TKGKG++GV+ R+GVT L
Sbjct: 166 EIPIGGVASIDERIKYGLEILGKEVKIADVFSEGKLIDVIGITKGKGWQGVIKRFGVTIL 225
Query: 262 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE----- 314
PR K +G R+ IG PA + FT R GQ G+H R+E NK++ K+G E
Sbjct: 226 PRWHKHRKGHRRTGTIGPQSPA-LMFTQPRPGQMGFHQRSEYNKRILKIGSNPAEINPRG 284
Query: 315 --SHTGITEFD 323
H G+ + D
Sbjct: 285 GWPHYGLVKTD 295
>gi|448436252|ref|ZP_21587053.1| 50S ribosomal protein L3P [Halorubrum tebenquichense DSM 14210]
gi|448535708|ref|ZP_21622228.1| 50S ribosomal protein L3P [Halorubrum hochstenium ATCC 700873]
gi|445682920|gb|ELZ35330.1| 50S ribosomal protein L3P [Halorubrum tebenquichense DSM 14210]
gi|445703209|gb|ELZ55144.1| 50S ribosomal protein L3P [Halorubrum hochstenium ATCC 700873]
Length = 338
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 151/294 (51%), Gaps = 21/294 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR RA +++++P+DD P L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSLGYGPRTRADSEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETP M V V Y +TP G + + VW+ EE+ R
Sbjct: 65 GMEEAVPVTVVETPQMYAVAVRAYEETPYGQKPVAEVWSGEFHEELDRALD--------- 115
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+E D + ++A L+ RV+ HT ++ + +KK +ME +V G
Sbjct: 116 --LPAEDTFEAD--AEELRALLDDDVVDDV--RVITHTAPSELSNVPKKKPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEKQIP--VDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
G++ E+ D+A + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERADFALDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+G S G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDASVDG 283
>gi|2425176|dbj|BAA22270.1| ribosomal protein L3 [Halobacterium salinarum]
Length = 330
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 150/293 (51%), Gaps = 27/293 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA + ++P DD L AF GYKAGMTH+V +K +
Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQAFAGYKAGMTHVVLVDDKANAPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
ET VT+ ETPPM V + Y TP G + L VWA E + R
Sbjct: 65 GMETTVPVTV-ETPPMRAVRL--YEDTPYGKKPLTEVWADDTHESLDRTL---------- 111
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ TDE +++ E+I +RV+ HT G+ +K +ME +V G
Sbjct: 112 ---SVPTRRVTDELIEALDT--EEIAD----IRVITHTVPGDHAGVPKKNPDVMETRVGG 162
Query: 209 GTIAEKVDYAYGFFEKQI--PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
GT+A+++++A E VF+ E D G+TKGKG +G V RWGV + K
Sbjct: 163 GTLADRLEFAADLIEDGGVHAFGDVFRAGEFADAAGITKGKGTQGPVKRWGVQKRKGKHA 222
Query: 267 RGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R + R++ +G W+P+RV TV + GQ GYH RTE+NK++ + G + S G
Sbjct: 223 RHVARRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDEPSPDG 275
>gi|116755016|ref|YP_844134.1| 50S ribosomal protein L3P [Methanosaeta thermophila PT]
gi|121693633|sp|A0B9X0.1|RL3_METTP RecName: Full=50S ribosomal protein L3P
gi|116666467|gb|ABK15494.1| LSU ribosomal protein L3P [Methanosaeta thermophila PT]
Length = 335
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 23/288 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL F PRKRA +++++ D+ + + F GYKAGMTH++ ++P S
Sbjct: 7 PRRGSLAFSPRKRAKSEVPRIRSWVADERAG---MAGFAGYKAGMTHVIMIDDRPRSLTE 63
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++E PPM V + Y G+R +WA++LS+++ R K+++
Sbjct: 64 GMEISVPVTVVEVPPMSVAALRVYEPYNGGIRPAGELWAENLSQDLERAI--TIPKARRG 121
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
A + I+++++++ + +RVLAHT R + G+ +K +MEI V G
Sbjct: 122 ASLE------------DIESRVDELCE----IRVLAHTNPRLLTGVPKKVPDIMEIPVTG 165
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
++ E++ A G Q+ V +F E ID+ VTKGKG +G V RWG+ RK R
Sbjct: 166 RSVEEQLKAAEGLLGSQVAVSNIFNVGEWIDVSAVTKGKGTQGPVKRWGIMLQKRKHSRT 225
Query: 269 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
LR V +G WHPAR+S+ V + GQ GYH RTE NK++ +G G +
Sbjct: 226 GKLRHVGNLGPWHPARISWRVPQLGQTGYHQRTEFNKRIMAIGTNGTD 273
>gi|229584895|ref|YP_002843397.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.27]
gi|259709736|sp|C3N5S7.1|RL3_SULIA RecName: Full=50S ribosomal protein L3P
gi|228019945|gb|ACP55352.1| ribosomal protein L3 [Sulfolobus islandicus M.16.27]
Length = 351
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK PR GS G PRKR++ + +P+ + P +L F+GYK GM+H+
Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNT-VWA----QHLSEEVR 135
+ P S + KE VT++E PP++ + + Y +G ++ T W+ Q L R
Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRR 119
Query: 136 RRFYKNWCK---SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMK 192
R + ++ K SKKK K+ + + I++ L++I + R+L TQ RK+
Sbjct: 120 IRSFSSFLKNDESKKKFEEKFGSKLDL------IKSNLDRIVYF----RLLVATQPRKIP 169
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
L +K L+EIQ+ GG ++DYA K+I + VF++ ++ID++GVTKGKG+ GV
Sbjct: 170 SLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGV 229
Query: 253 VTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
+ R+ V LPR K +G RK+ G S+T + GQ G+H RTE NK++ K+G
Sbjct: 230 IKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD 287
Query: 311 GGQE 314
+E
Sbjct: 288 DPKE 291
>gi|386001185|ref|YP_005919484.1| 50S ribosomal protein L3P [Methanosaeta harundinacea 6Ac]
gi|357209241|gb|AET63861.1| 50S ribosomal protein L3P [Methanosaeta harundinacea 6Ac]
Length = 297
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 130/252 (51%), Gaps = 20/252 (7%)
Query: 63 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSL 122
+ F GYKAGMTHI+ +KP S E VTI+ETPP+ + + Y K G+R+
Sbjct: 1 MDGFAGYKAGMTHIIMIDDKPNSLTEGMEISVPVTILETPPLSIAALRVYEKYNGGVRAA 60
Query: 123 NTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRV 182
W+ L + R K + DE I A +E +++ +R+
Sbjct: 61 GEAWSDKLDPSLARSI----------TVPKNKRGAAIDE----IGAIIEDMEE----LRL 102
Query: 183 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIG 242
+AHT + + G+ +K LMEIQVNGG IA + + A +P+ ++F +ID+
Sbjct: 103 IAHTNPKLLTGVPKKNPDLMEIQVNGGNIANQFELAKSLLGSSVPISSIFSPGSIIDVSA 162
Query: 243 VTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTE 300
+TKGKG +G V RWG+ RK RG R + +G W+P V +TV GQ GYH RTE
Sbjct: 163 ITKGKGVQGPVKRWGINLQKRKHSRGGKRRHIGNLGPWNPHHVRWTVPLLGQMGYHQRTE 222
Query: 301 MNKKVYKLGKGG 312
NK+V +G G
Sbjct: 223 FNKRVLAIGSDG 234
>gi|408404337|ref|YP_006862320.1| 50S ribosomal protein L3p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|300521620|gb|ADK26021.1| r-protein L3p [Candidatus Nitrososphaera gargensis]
gi|408364933|gb|AFU58663.1| 50S ribosomal protein L3p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 332
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 152/298 (51%), Gaps = 25/298 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK+ PR GS+ F PR RA +V+ +P+ K L F G+KAG H++
Sbjct: 1 MGHRKYSAPRRGSVAFRPRARARSLEARVRTWPQLAAEK-SSLLGFAGFKAGCIHVLTID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ + K+ T+I TPP+ V+G+ GY K G ++ V+A+ L +E+ R+F
Sbjct: 60 DREKTPNFGKQLLNPATVIVTPPIRVIGIRGYKKDIYGQHAIFDVYAKDLPKELSRKF-- 117
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
KS +AF A+ E + AS + + + GL QK
Sbjct: 118 -DAKSSDEAF-----------------AKAEGMLGSASAIMAIVAVSPNSI-GLSQKTPF 158
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ E+ V+G + DY +++ V +FQ + ID+ G+T+GKG EG VTR+G+ R
Sbjct: 159 VFEMAVSGKDAKSQYDYVKSVLGREVKVSDIFQVGQNIDVFGITRGKGIEGPVTRFGIKR 218
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG---KGGQES 315
K+ + +R V +G PA V +TVAR GQ G+H RTE NK++ + K GQ S
Sbjct: 219 KQHKSRKSVRAVGTLGPISPAVVMYTVARQGQRGFHQRTEYNKRILVMSNTEKDGQNS 276
>gi|297527410|ref|YP_003669434.1| 50S ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
gi|297256326|gb|ADI32535.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
Length = 395
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 176/338 (52%), Gaps = 49/338 (14%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFP------------------KDDPSKPCR 62
M HRK PRHGSLG PRKRAA+ +++++P K KP
Sbjct: 1 MGHRKHSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEATDKGISPKPV- 59
Query: 63 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTP-RGLRS 121
L + YKAGM+H + ++P + KE VTI++ PP++++G+ GY P GL S
Sbjct: 60 LLGYAAYKAGMSHAIIIDDRPHTFTSGKEIAVPVTILDAPPILILGIRGYKIHPMHGLLS 119
Query: 122 LNTVWAQHLS--EEVRRRFYKN--------------WCKSKKKAFTKYSKQYETDE-GKK 164
VW + +EV + Y + + K +K K +E G K
Sbjct: 120 FGEVWRSPVEALKEVYEKIYSDNPFVNLGIKDVVRKYLKGLRKVNPGLVKPDPNNEYGFK 179
Query: 165 SIQAQLE-KIKKYASV----VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAY 219
++ E K+++ + +RV+A T I + G+ +KK ++EI+V GGT+ +++ YA
Sbjct: 180 FLENNWEEKLQRLKAADLADIRVIAST-IPVLSGIGKKKPEIIEIKVGGGTLNDRIAYAE 238
Query: 220 GFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGA 277
I VD VF++ + IDIIGVTKGKG++GV+ R+GV LPR K +G RK IG+
Sbjct: 239 KLLGNYITVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGS 295
Query: 278 WHPARVSFT-VARAGQNGYHHRTEMNKKVYKLGKGGQE 314
P + + + GQ G+H RTE NK++ K+G G E
Sbjct: 296 RSPGFGTMSETPQPGQTGFHRRTEYNKRIIKIGVNGWE 333
>gi|375083294|ref|ZP_09730320.1| 50S ribosomal protein L3P [Thermococcus litoralis DSM 5473]
gi|374742025|gb|EHR78437.1| 50S ribosomal protein L3P [Thermococcus litoralis DSM 5473]
Length = 361
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 155/302 (51%), Gaps = 26/302 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL + PRKRA +++ +P++ + R+ F GYKAGMTH++ + PG
Sbjct: 3 KISRPRRGSLAYSPRKRAKSIVPRIRKWPQE---QEVRMLGFAGYKAGMTHVLMIDDAPG 59
Query: 85 SKLHK-KETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWC 143
L K KE VTI+E PP++V GV Y + GL + V E N+
Sbjct: 60 --LTKGKEIFVPVTIVEAPPLIVYGVRAYKQGYLGLETATEVIVPDFKLE-------NYP 110
Query: 144 KSKKKAFTKY----------SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKG 193
K K T Y K Y + ++ + +LE + K +V V A +
Sbjct: 111 SKKAKNVTFYKLLERRIKTLPKNYNEETFQQKL-GELEDLVKSGEIVEVRALVATQPWLA 169
Query: 194 LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVV 253
+KK +ME V G ++ EK Y K++ V ++ E++DI+ VTKGKG +G V
Sbjct: 170 RIKKKPEVMEYAVGGTSVEEKFAYIKERLGKELRASEVLKEGELLDIVAVTKGKGTQGPV 229
Query: 254 TRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
RWG+ K R R V +G WHPARV +TV +AGQ G+HHRTE NK++ ++G+
Sbjct: 230 KRWGIKIQFHKAQRAGKARHVGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLLRIGEN 289
Query: 312 GQ 313
G+
Sbjct: 290 GK 291
>gi|448735135|ref|ZP_21717352.1| 50S ribosomal protein L3P [Halococcus salifodinae DSM 8989]
gi|445798748|gb|EMA49139.1| 50S ribosomal protein L3P [Halococcus salifodinae DSM 8989]
Length = 337
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 149/296 (50%), Gaps = 28/296 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR+RA+ + ++P+ D +P L F GYKAGM+H+V + S
Sbjct: 7 PRKGSLGYGPRQRASSEVPRFGSWPEAD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y TP GLR L W ++ R ++
Sbjct: 65 GMEQTVPVTVVETPPMRAVALRAYEDTPYGLRPLTETWTDEFHADLDRALDVPDGEADPD 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
AF + + + + VR + HT +M + +KK +ME ++ G
Sbjct: 125 AFREAISEADIGD------------------VRAITHTVPGEMVNIPKKKPDVMETRIGG 166
Query: 209 GTIAEKVDYAY----GFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
G++ ++V++ G E + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 167 GSLDDRVEFGLELITGGGEHNL--TEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGK 224
Query: 265 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G G + S G
Sbjct: 225 HFRQGYKRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDSGDGDEPSVDG 280
>gi|20089942|ref|NP_616017.1| 50S ribosomal protein L3P [Methanosarcina acetivorans C2A]
gi|42559661|sp|Q8TRU7.1|RL3_METAC RecName: Full=50S ribosomal protein L3P
gi|19914903|gb|AAM04497.1| ribosomal protein L3p [Methanosarcina acetivorans C2A]
Length = 337
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 149/288 (51%), Gaps = 19/288 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
P+ GSL F PRKRA H + +A+P + + +L +F GYK GMTH++ + S
Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDTKNSLTQ 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETP + V + Y + G +++ VWA L E++RR ++ +
Sbjct: 65 GMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRRIPIPAAGNQAE 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
A K E EG+ S VR + +T + + G+ +K +ME ++
Sbjct: 125 ALENIGKLIE--EGR-------------VSDVRAVIYTLPKSLTGVPKKVPDIMESGISA 169
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 267
+ K +Y+ + V VF+ ++D +T GKG +G V RWG+ + K R
Sbjct: 170 RDLGTKFEYSKTILGTLVSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQ 229
Query: 268 -GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
LR+V +GA++P+RVS+ V + GQ GYH RTE NK++ K+G G+E
Sbjct: 230 GSLRQVGTLGAFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE 277
>gi|448730377|ref|ZP_21712685.1| 50S ribosomal protein L3P [Halococcus saccharolyticus DSM 5350]
gi|445793545|gb|EMA44117.1| 50S ribosomal protein L3P [Halococcus saccharolyticus DSM 5350]
Length = 337
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 149/296 (50%), Gaps = 28/296 (9%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ PR+RA+ + ++P+ D +P L F GYKAGM+H+V + S
Sbjct: 7 PRKGSLGYGPRQRASSEVPRFGSWPEAD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y TP GLR L W ++ R ++
Sbjct: 65 GMEQTVPVTVVETPPMRAVALRAYEDTPYGLRPLTETWTDEFHADLDRALDVPDGEADPD 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
AF + + + + +R + HT +M + +K+ +ME ++ G
Sbjct: 125 AFREAISEADIGD------------------IRAITHTVPGEMANVPKKRPDVMETRIGG 166
Query: 209 GTIAEKVDYAY----GFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
G++ ++V++ G E + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 167 GSLDDRVEFGLELITGGGEHNL--TEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGK 224
Query: 265 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G G + S G
Sbjct: 225 HFRQGYRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDAGDGDEPSVDG 280
>gi|325969277|ref|YP_004245469.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
gi|323708480|gb|ADY01967.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
Length = 342
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 154/295 (52%), Gaps = 24/295 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K P+ GS+ + PRKRA K + +P P KP L F+ YKAGM H V ++P
Sbjct: 4 KIHRPKRGSMAYYPRKRAESLVAKFRVWPDPRPGKPM-LLGFVAYKAGMAHAVFIDDRPT 62
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTP-RGLR-SLNTVWAQHLSEEVRRRFYKNW 142
S + KE + VTI+++PP+ V+ Y P + L+ SL VW + +++ R+
Sbjct: 63 SPFYSKEVIKPVTILDSPPIKVIAFKAYTYDPWKNLKLSLGEVWMPDVPKDIARK----- 117
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
+++ +E K I ++ I + +R L TQ R + G+ +K L+
Sbjct: 118 -------IPTLPEKFNKEEMMKKILDNVDVITE----IRALVATQPR-LSGIGKKTPELL 165
Query: 203 EIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
EI + G I + + YA K I V VF + + +D+ +TKGKG +GVV R+ V L
Sbjct: 166 EIPIGGVDDINQLIKYADSILGKDINVTDVFNEGQYVDVAAITKGKGLQGVVKRFNVKIL 225
Query: 262 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
P+ K +G R++ IG +PA ++FT R GQ G H RTE NK++ K+G G E
Sbjct: 226 PKWHKHRKGYRRIGAIGPQNPA-LAFTTPRPGQMGLHKRTEYNKRILKIGLNGAE 279
>gi|227827691|ref|YP_002829471.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.14.25]
gi|238619862|ref|YP_002914688.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.4]
gi|385773363|ref|YP_005645929.1| 50S ribosomal protein L3 [Sulfolobus islandicus HVE10/4]
gi|385776001|ref|YP_005648569.1| 50S ribosomal protein L3 [Sulfolobus islandicus REY15A]
gi|259709737|sp|C4KHF6.1|RL3_SULIK RecName: Full=50S ribosomal protein L3P
gi|259709739|sp|C3MVH8.1|RL3_SULIM RecName: Full=50S ribosomal protein L3P
gi|227459487|gb|ACP38173.1| ribosomal protein L3 [Sulfolobus islandicus M.14.25]
gi|238380932|gb|ACR42020.1| ribosomal protein L3 [Sulfolobus islandicus M.16.4]
gi|323474749|gb|ADX85355.1| ribosomal protein L3 [Sulfolobus islandicus REY15A]
gi|323477477|gb|ADX82715.1| ribosomal protein L3 [Sulfolobus islandicus HVE10/4]
Length = 351
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 166/305 (54%), Gaps = 25/305 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK PR GS G PRKR++ + +P+ + P +L F+GYK GM+H+
Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNT-VWAQHLSE--EVRRR 137
+ P S + KE VT++E PP++ + + Y +G ++ T W+ + ++ RR
Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRR 119
Query: 138 ------FYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKM 191
F KN +SKKK K+ + + I++ L++I + R+L TQ RK+
Sbjct: 120 IHSFSSFLKN-DESKKKFEEKFGSKLDL------IKSNLDRIVYF----RLLVATQPRKI 168
Query: 192 KGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEG 251
L +K L+EIQ+ GG ++DYA K+I + VF++ ++ID++GVTKGKG+ G
Sbjct: 169 PSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAG 228
Query: 252 VVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
V+ R+ V LPR K +G RK+ G S+T + GQ G+H RTE NK++ K+G
Sbjct: 229 VIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIG 286
Query: 310 KGGQE 314
+E
Sbjct: 287 DDPKE 291
>gi|227830387|ref|YP_002832167.1| 50S ribosomal protein L3P [Sulfolobus islandicus L.S.2.15]
gi|229579206|ref|YP_002837604.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.G.57.14]
gi|229582042|ref|YP_002840441.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.N.15.51]
gi|284997894|ref|YP_003419661.1| 50S ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
gi|259709738|sp|C3MQ59.1|RL3_SULIL RecName: Full=50S ribosomal protein L3P
gi|259709740|sp|C3NHA9.1|RL3_SULIN RecName: Full=50S ribosomal protein L3P
gi|259709741|sp|C3NEE3.1|RL3_SULIY RecName: Full=50S ribosomal protein L3P
gi|227456835|gb|ACP35522.1| ribosomal protein L3 [Sulfolobus islandicus L.S.2.15]
gi|228009920|gb|ACP45682.1| ribosomal protein L3 [Sulfolobus islandicus Y.G.57.14]
gi|228012758|gb|ACP48519.1| ribosomal protein L3 [Sulfolobus islandicus Y.N.15.51]
gi|284445789|gb|ADB87291.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
Length = 351
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 166/305 (54%), Gaps = 25/305 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK PR GS G PRKR++ + +P+ + P +L F+GYK GM+H+
Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNT-VWAQHLSE--EVRRR 137
+ P S + KE VT++E PP++ + + Y +G ++ T W+ + ++ RR
Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRR 119
Query: 138 ------FYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKM 191
F KN +SKKK K+ + + I++ L++I + R+L TQ RK+
Sbjct: 120 IHSLSSFLKN-DESKKKFEEKFGSKLDL------IKSNLDRIVYF----RLLVATQPRKI 168
Query: 192 KGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEG 251
L +K L+EIQ+ GG ++DYA K+I + VF++ ++ID++GVTKGKG+ G
Sbjct: 169 PSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAG 228
Query: 252 VVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
V+ R+ V LPR K +G RK+ G S+T + GQ G+H RTE NK++ K+G
Sbjct: 229 VIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIG 286
Query: 310 KGGQE 314
+E
Sbjct: 287 DDPKE 291
>gi|15897623|ref|NP_342228.1| 50S ribosomal protein L3P [Sulfolobus solfataricus P2]
gi|284174948|ref|ZP_06388917.1| 50S ribosomal protein L3P [Sulfolobus solfataricus 98/2]
gi|384434237|ref|YP_005643595.1| 50S ribosomal protein L3 [Sulfolobus solfataricus 98/2]
gi|9910845|sp|Q9UXA8.1|RL3_SULSO RecName: Full=50S ribosomal protein L3P
gi|6015757|emb|CAB57584.1| ribosomal protein L3 (HMAL3) [Sulfolobus solfataricus P2]
gi|13813888|gb|AAK41018.1| LSU ribosomal protein L3AB (rpl3AB) [Sulfolobus solfataricus P2]
gi|261602391|gb|ACX91994.1| ribosomal protein L3 [Sulfolobus solfataricus 98/2]
Length = 351
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 167/305 (54%), Gaps = 25/305 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK PR GS G PRKR++ + +P+ + P +L F+GYK GMTH+
Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNT-VWAQHLSE--EVRRR 137
+ P S + KE VT++E PP++ + + Y +G ++ T W+ + ++ RR
Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRR 119
Query: 138 ------FYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKM 191
F K+ +SKKK +++ + + I++ L++I + R+L TQ RK+
Sbjct: 120 IHSISSFLKD-DESKKKFDERFNTKLDL------IKSNLDRIVYF----RLLVSTQPRKI 168
Query: 192 KGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEG 251
L +K L+EIQ+ GG ++DYA K+I + VF++ ++ID++GVTKGKG+ G
Sbjct: 169 PSLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAG 228
Query: 252 VVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
V+ R+ V LPR K +G RK+ G S+T + GQ G+H RTE NK++ K+G
Sbjct: 229 VIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIG 286
Query: 310 KGGQE 314
+E
Sbjct: 287 DEPKE 291
>gi|41615218|ref|NP_963716.1| 50S ribosomal protein L3P [Nanoarchaeum equitans Kin4-M]
gi|42559579|sp|P60458.1|RL3_NANEQ RecName: Full=50S ribosomal protein L3P
gi|40068942|gb|AAR39277.1| NEQ433 [Nanoarchaeum equitans Kin4-M]
Length = 321
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 155/282 (54%), Gaps = 29/282 (10%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA+R ++K +PK + KP AF YK GMTH + ++ +
Sbjct: 9 PRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTILNI-------N 58
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
+ VT++E P ++V+G Y K L+ +++++ L + V R+ K
Sbjct: 59 GERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK-------- 110
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
K Y +E K+ ++ + A V+++ TQ K+K +K + +I + G
Sbjct: 111 -----LKNYNFEEKKEQFLSKADN----ADEVKIIVSTQPWKIK--LKKTPEIFDIPIGG 159
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
+ +K++YA K++ ++ VF++ + +D+I VTKGKG++GV+ R+ V R K+ +G
Sbjct: 160 SDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKG 219
Query: 269 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
+RKV IG+ P R+ TV GQ GYH RTE NK + K+G+
Sbjct: 220 VRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIGE 261
>gi|219851107|ref|YP_002465539.1| 50S ribosomal protein L3P [Methanosphaerula palustris E1-9c]
gi|254803682|sp|B8GKD3.1|RL3_METPE RecName: Full=50S ribosomal protein L3P
gi|219545366|gb|ACL15816.1| ribosomal protein L3 [Methanosphaerula palustris E1-9c]
Length = 337
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 144/288 (50%), Gaps = 19/288 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL + PRKRA K ++P D +P L +F GYK GMTH++ + S
Sbjct: 7 PRRGSLAYSPRKRAKSQVPKYHSWPARD-GEPI-LQSFAGYKVGMTHVIMVDDHKNSPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
K+ VTIIE PPM V + Y G R+L VW + LS + RR
Sbjct: 65 GKDIMVPVTIIEIPPMKVAAIRAYTADTYGKRALTEVWTEQLSTLLGRRI---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
K+Y + G K++ + + + L +TQ + G+ +K LME+ + G
Sbjct: 115 ---TLPKKYSEEAGFKALSEAVAA--GTVTELHALMYTQPDTLTGVPKKVPELMEVCIGG 169
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
GT+ +KV++A ++ + V E D+ +T GKG +G V RWG+ RK RG
Sbjct: 170 GTLEQKVEFAQSIIGNEVNLADVIGAGEYADVTAITTGKGTQGPVKRWGIMLRKRKHSRG 229
Query: 269 LRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+K + +G W+P V + V + GQ GY RT+ NK++ K+G+ G +
Sbjct: 230 GKKRHIGNLGPWNPHHVRWQVPQMGQMGYQQRTDFNKRILKIGENGTD 277
>gi|88603499|ref|YP_503677.1| 50S ribosomal protein L3P [Methanospirillum hungatei JF-1]
gi|109893522|sp|Q2FU91.1|RL3_METHJ RecName: Full=50S ribosomal protein L3P
gi|88188961|gb|ABD41958.1| LSU ribosomal protein L3P [Methanospirillum hungatei JF-1]
Length = 337
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 145/290 (50%), Gaps = 23/290 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFP--KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 86
PR GSL + PRKRA K A+P + +P+ L F GYK GMTH++ + S
Sbjct: 7 PRMGSLAYSPRKRAKSPVPKYHAWPAYQGEPA----LQGFAGYKVGMTHVIMVDDHAHSP 62
Query: 87 LHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
K+ VT+IE P M V + Y G L VWA +E+ RR
Sbjct: 63 NEGKDIMVPVTVIEVPDMRVAAIRVYRHDTYGNHVLTEVWADSFDKELSRRL-------- 114
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
SK Y+ +E +K I+ LE K VV L +T+ + G+ +K LME ++
Sbjct: 115 -----NLSKNYKREEAEKKIREALEA-DKIVDVV-ALTYTRPSVLTGVPKKVPDLMETRI 167
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
+GG++ E+ +Y K + ++F+ + D+ +TKGKG +G V RWGV RK
Sbjct: 168 DGGSMTERFEYGLSMLGKDFDIRSLFKVGQYTDVTAITKGKGTQGPVKRWGVHLRKRKHS 227
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
RG R V +G W P V + V GQ GYH RTE NK++ K+G+ G E
Sbjct: 228 RGKKERHVGTLGPWTPHHVRWQVPMMGQMGYHQRTEFNKRLLKIGEDGAE 277
>gi|298674802|ref|YP_003726552.1| 50S ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
gi|298287790|gb|ADI73756.1| ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
Length = 337
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 147/290 (50%), Gaps = 23/290 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
P GSL + PRKRA H K +++P D + +L F GYK GMTH++ + S
Sbjct: 7 PNRGSLAYSPRKRAKSHIPKFRSWPNLDGN--PKLQDFAGYKVGMTHVIMIDDTKNSVTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E T++ETP + V + Y + G + + WA L +V R+
Sbjct: 65 GAEISVPATVVETPDIGVASIRAYKDSEYGKKPVAEAWATDLDADVLRKV---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASV--VRVLAHTQIRKMKGLKQKKAHLMEIQV 206
K + + +KS++ ++E + +V +RV+ +T + G+ +KK+ +ME V
Sbjct: 115 ------KSPDNHDTEKSLE-KMESLIDDGTVKDLRVVTYTLPSNLTGVPKKKSDIMETGV 167
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
+G + EK +YA +I + VF ++DI +T GKG +G V RWG+ K +
Sbjct: 168 SGSDMKEKFEYAKSILGTKISITDVFNPGGIVDIAAITTGKGTQGPVKRWGIQIAKHKHN 227
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
R R+V +G WHPA +S+ V + GQ GYH RTE NK++ K+ G E
Sbjct: 228 RAGSARQVGTLGPWHPAHISWRVPQMGQMGYHQRTEYNKRIIKVSNEGSE 277
>gi|307354323|ref|YP_003895374.1| 50S ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
gi|307157556|gb|ADN36936.1| ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
Length = 337
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 148/288 (51%), Gaps = 19/288 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL + PRKRA K ++P + +P + GYK GMTH++ + S
Sbjct: 7 PRRGSLAYSPRKRAKSQVPKYHSWPSYN-GEPA-FQGYAGYKVGMTHVIMIDDHKNSPSE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
KE VT+IE PPM V+ + Y G ++ VW++++ E + R
Sbjct: 65 GKEISVPVTVIEIPPMKVIAIRAYTNDTYGRKAFAEVWSENIDESISRA----------- 113
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
T+ K++ +E K+ I +E + + + + +TQ ++ G+ +K LMEI++ G
Sbjct: 114 --TQIPKKHNAEEQKEKILKGIED--GFVTDIFAIMYTQPEQLTGVPKKVPELMEIRIAG 169
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
G ++ ++D+ +++ ++ V + ID+ VT GKG +G V RWG+ RK RG
Sbjct: 170 GDLSTRLDFGISKLGEEVEIENVANAGQYIDVTAVTTGKGTQGAVKRWGIQVRKRKHSRG 229
Query: 269 LRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+K + +G W P V + V + GQ GY RTE NK++ ++G +E
Sbjct: 230 KKKRHIGNLGPWTPHHVRWQVPQMGQMGYQQRTEFNKRILRIGNNPEE 277
>gi|282164890|ref|YP_003357275.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
gi|282157204|dbj|BAI62292.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
Length = 341
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 155/298 (52%), Gaps = 26/298 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVR 78
MSH PR GSL + PR RA + K +++ + D P +L + +G+KAGM+H+V
Sbjct: 1 MSHP--HAPRRGSLAYSPRVRARSQKPKYRSWAELGDQP----KLQSLVGFKAGMSHVVM 54
Query: 79 DVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF 138
++P S E VTIIETP M V G+ Y P G L W
Sbjct: 55 VDDRPHSTTEGMEISIPVTIIETPAMNVAGIRAYDDGPYGKHVLAEAWV----------- 103
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
N K K F + K +TD + A L K K A + R+L + + ++ G+ +K
Sbjct: 104 --NDAKDLAKLF-RLPKSVDTDAQLAKV-AGLVKDGKVAEL-RLLTYVKTEEVSGIPKKV 158
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
L+E +V GG++ ++ ++A KQ+ + +F E++D+ +TKGKG +G V RWG+
Sbjct: 159 PELLENRVAGGSMDKRFEFAKSLLGKQVKPNDIFVPGELVDVSAITKGKGTQGPVKRWGI 218
Query: 259 TRLPRKTHRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
RK R +K V +G W+P RV + V + GQ GYH RTE NK++ KLG+ +E
Sbjct: 219 AIQKRKHARTGKKRHVGNLGPWNPHRVRWQVPQLGQTGYHQRTEYNKRIIKLGEKAEE 276
>gi|385804241|ref|YP_005840641.1| 50S ribosomal protein L3 [Haloquadratum walsbyi C23]
gi|339729733|emb|CCC41011.1| 50S ribosomal protein L3 [Haloquadratum walsbyi C23]
Length = 338
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 25/296 (8%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA +++++ +D P + F GYKAGMT ++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAESEVPRIRSWASND-GAPG-VQGFAGYKAGMTQVLMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y TP G + L VW + + R + +
Sbjct: 65 GMEEAVPVTVVETPPMRAVALRAYEDTPYGSKPLTEVWGREFDTSLERTLDLPNEDTFED 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
ET + VR++ HT M+ + +K +ME +V G
Sbjct: 125 DAAALRDDAETGD---------------IDDVRLITHTLPAGMRNIPKKTPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL----P 262
GT+ ++V++ + + +F+ E +D GVTKGKG +G V R+GV +
Sbjct: 170 GTLTDRVEFGLNLISDGGEHEISDIFRAGEYLDAAGVTKGKGTQGPVKRFGVQKRKGKHA 229
Query: 263 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R+ +R R++ +G W+P+RV TV + GQ GYH RTE+NK++ ++G G + + G
Sbjct: 230 RQGYR--RRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIEIGNGNEPTVDG 283
>gi|21228226|ref|NP_634148.1| 50S ribosomal protein L3P [Methanosarcina mazei Go1]
gi|42559655|sp|Q8PV50.1|RL3_METMA RecName: Full=50S ribosomal protein L3P
gi|20906682|gb|AAM31820.1| LSU ribosomal protein L3P [Methanosarcina mazei Go1]
Length = 337
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 146/288 (50%), Gaps = 19/288 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
P+ GSL F PRKRA H + +A+P + + +L +F GYK GMTH++ + S
Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDIKNSLTQ 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETP + V V Y + G +++ WA L E++RR ++ +
Sbjct: 65 GMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRRIPIPAAGNQAE 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
K E EG+ S +R + +T + + G+ +K +ME ++
Sbjct: 125 GLENIGKLIE--EGR-------------VSDIRAVTYTLPKSLTGVPKKVPDIMESGISA 169
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 267
+ K +YA + V VF+ ++D +T GKG +G V RWG+ K R
Sbjct: 170 KDLGAKFEYAKSILGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQ 229
Query: 268 -GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
LR++ +G+++P+RVS+ V + GQ GYH RTE NK++ K+G G+E
Sbjct: 230 GSLRQIGTLGSFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE 277
>gi|330835825|ref|YP_004410553.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
gi|329567964|gb|AEB96069.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
Length = 341
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 156/292 (53%), Gaps = 21/292 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK PR GS G PRKR+ +++P + S P L F+GYKAGMTH+
Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRSEDILPSPRSYPVLNSSSPVML-GFIGYKAGMTHVYMID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRSLNTVWAQHLSEEVRRRFY 139
E S ++ KE VT+IETPP++V+ + Y +G S+ VW LS+ + ++
Sbjct: 60 EDKSSSMYGKEIYMPVTVIETPPILVMSLRAYAIDGKGESMSIGEVWGD-LSD--KSKYI 116
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
KS K ++ +T++ K I++ L+ I S R+L TQ + L +K
Sbjct: 117 TRRIKSLK------IQKEKTEQQLKKIESNLDNI----SFFRLLVSTQPYLIPSLGKKTP 166
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
+ EIQ+ GG +++ + V VF + ++IDI+GVT G G++GV+ R+GV
Sbjct: 167 DIAEIQIGGGNPKAQLELGLKLLGNTVSVRDVFNEGQLIDILGVTTGYGFQGVIKRYGVQ 226
Query: 260 RLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKVYKL 308
LPR K +G RKV G P+ + + V + GQ GYH RTE NK++ ++
Sbjct: 227 ELPRWHKHRKGSRKVGTKG---PSLGTPSYVPQPGQMGYHRRTEYNKRILRI 275
>gi|432332011|ref|YP_007250154.1| archaeal ribosomal protein L3 [Methanoregula formicicum SMSP]
gi|432138720|gb|AGB03647.1| archaeal ribosomal protein L3 [Methanoregula formicicum SMSP]
Length = 337
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 138/292 (47%), Gaps = 19/292 (6%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA H K +++P + P L F GYK GMTH+V +
Sbjct: 3 KINRPRRGSLAFSPRKRAKSHIPKYQSWPSVE-GAPI-LQGFAGYKVGMTHVVMVDDHKS 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S KE VT+IE P M V + Y K G + +WA+ L + RR
Sbjct: 61 SPTEGKEIMVPVTVIEVPAMKVAAIRAYSKDTYGKHAFTELWAEQLDGVLGRRI------ 114
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
K+Y+ D K + + + LA+TQ M G+ +K LMEI
Sbjct: 115 -------NLPKEYDRDAAVKKFSDAVAA--GTVAEIYALAYTQPASMSGVPKKVPDLMEI 165
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
+V G I + ++A G K++ + V Q DI +T GKG +G V RWGV RK
Sbjct: 166 KVGGADIKKLFEFAQGLLGKEVGLSNVIQTGAYADITAITTGKGTQGAVKRWGVALRKRK 225
Query: 265 THRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
G +K V +G W+P + + V + GQ GY RTE NK++ K+ + E
Sbjct: 226 HAVGGKKRHVGTLGPWNPHHIRWEVPQIGQLGYQQRTEFNKRILKVSENASE 277
>gi|110668741|ref|YP_658552.1| 50S ribosomal protein L3P [Haloquadratum walsbyi DSM 16790]
gi|121692171|sp|Q18GE9.1|RL3_HALWD RecName: Full=50S ribosomal protein L3P
gi|109626488|emb|CAJ52949.1| 50S ribosomal protein L3 [Haloquadratum walsbyi DSM 16790]
Length = 338
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 25/296 (8%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA +++++ +D P + F GYKAGMT ++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAESEVPRIRSWASND-GAPG-VQGFAGYKAGMTQVLMVNDEANSPRE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETPPM V + Y TP G + L VW + + R + +
Sbjct: 65 GMEEAVPVTVVETPPMRAVALRAYEDTPYGSKPLTEVWGREFDTSLERTLDLPNEDTFED 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
ET + VR++ HT M+ + +K +ME +V G
Sbjct: 125 DAAALRDDAETGD---------------IDDVRLITHTLPAGMRNIPKKTPDVMETRVGG 169
Query: 209 GTIAEKVDYAYGFFEK--QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL----P 262
GT+ ++V++ + + +F+ E +D GVTKGKG +G V R+GV +
Sbjct: 170 GTLTDRVEFGLDLISDGGEHEISDIFRAGEYLDAAGVTKGKGTQGPVKRFGVQKRKGKHA 229
Query: 263 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R+ +R R++ +G W+P+RV TV + GQ GYH RTE+NK++ ++G G + + G
Sbjct: 230 RQGYR--RRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIEIGNGDEPTVDG 283
>gi|119719148|ref|YP_919643.1| 50S ribosomal protein L3P [Thermofilum pendens Hrk 5]
gi|119524268|gb|ABL77640.1| LSU ribosomal protein L3P [Thermofilum pendens Hrk 5]
Length = 334
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 151/283 (53%), Gaps = 25/283 (8%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS + PRKRA +V+ +P++ F GYK GM H++ S +
Sbjct: 7 PRRGSRAYYPRKRARSIVARVRRWPQNREG----FLGFAGYKVGMLHVIGVEMNKNSPFY 62
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
+E A T+IE PP+ VV V Y KTP G ++L VWA+ L +++ R F
Sbjct: 63 GQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCEVWAKDLPKDLERVF---------- 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
K + Y ++ KK LE++K S VRVLA TQ R + GL +KK L+EI V G
Sbjct: 113 PLPK-DQSYHEEQLKK-----LEEVKSRVSEVRVLAATQPR-LSGLGKKKPELIEIAV-G 164
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTH 266
G + + A K + + VF++ + ID+I VTKGKG++G V R+GV +PR K
Sbjct: 165 GPPEKALSLALEKLGKDLTISDVFKEGDYIDVIAVTKGKGFQGSVKRFGVEEMPRWHKHR 224
Query: 267 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+G ++ +G PA + F GQ G+H RTE NK++ K+G
Sbjct: 225 KGHSRIGSVGPQKPA-IMFYTPFPGQLGFHQRTEYNKRILKVG 266
>gi|429216878|ref|YP_007174868.1| 50S ribosomal protein L3 [Caldisphaera lagunensis DSM 15908]
gi|429133407|gb|AFZ70419.1| archaeal ribosomal protein L3 [Caldisphaera lagunensis DSM 15908]
Length = 345
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 161/302 (53%), Gaps = 34/302 (11%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK R GSLGF PR+RA ++K++P +P +L F+GYK GMTH+
Sbjct: 1 MGHRKKSAARRGSLGFYPRQRAVEFVPRIKSWPTLSIQEP-KLLGFIGYKVGMTHVFIIE 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYV-KTPRGLRSLNTVWAQHLSE-EVRRRF 138
+ G + KE VTI+ETPP+ V+ V GY +GL L W++ ++ E+ RR
Sbjct: 60 NRQGLPTYGKEVMRPVTIVETPPVYVLAVRGYAFDLNKGLYPLTEAWSKIPNDLELERRI 119
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
+++T+ K +Q ++K+ +RVL +Q + GL +KK
Sbjct: 120 -------------STLGEFDTEGSIKELQKSANELKE----IRVLIASQPKLTGGLSKKK 162
Query: 199 AHLMEIQVNGGT--IAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW 256
++E++VN + + + +D+A +Q+ V VFQ ++ID++ V+KGKG++GV+ R
Sbjct: 163 PDVIEVKVNAPSNDVKKALDFAINKLGQQVTVKDVFQPGQVIDVLAVSKGKGWQGVIKRA 222
Query: 257 GVTRLPRKT-HR-GLRKVAC----IGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGK 310
G +LPR T HR G RK+ +G W + GQ G+H RT+ NK++ +G
Sbjct: 223 GAKQLPRWTKHRKGSRKIGARSHGLGTW------WENPSPGQLGFHRRTDYNKRILDIGD 276
Query: 311 GG 312
G
Sbjct: 277 EG 278
>gi|147919334|ref|YP_686930.1| 50S ribosomal protein L3P [Methanocella arvoryzae MRE50]
gi|121685298|sp|Q0W1Y9.1|RL3_UNCMA RecName: Full=50S ribosomal protein L3P
gi|110622326|emb|CAJ37604.1| 50S ribosomal protein L3P [Methanocella arvoryzae MRE50]
Length = 337
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 25/291 (8%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 86
PR GSLG+ PR RA + K++ + + D P ++ F+G+KAGM+HIV ++P S
Sbjct: 7 PRRGSLGYSPRVRARSQKPKMRNWAELGDQP----KIQGFVGFKAGMSHIVMVDDRPHSA 62
Query: 87 LHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
E VTI+E P M V G+ Y +P G + + W L
Sbjct: 63 TEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGEAWISDLK--------------M 108
Query: 147 KKAFTKYSKQ-YETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
++ T K Y+TDE I A+L K K + +RV+ T ++ G+ +K LME +
Sbjct: 109 LESLTHLPKNGYKTDEQLAKI-AELVK-KGVVADLRVMTVTLTSEVSGIPKKVPELMENR 166
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
+ GG +A++ ++A K + + VF E++D+ +TKG G +G V RWG+ RK
Sbjct: 167 IAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVRWGIATQKRKH 226
Query: 266 HRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
R +K V +G W+P R+ + V + GQ GYH RTE NK++ K+G +E
Sbjct: 227 ARTGKKRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRILKMGDKAEE 277
>gi|379994229|gb|AFD22741.1| ribosomal protein L3, partial [Collodictyon triciliatum]
Length = 209
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Query: 213 EKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 272
EKVD+A FEK I V VF ++E+ID + VTKG GY+GV++RWGVT+LPRKTH+GLRKV
Sbjct: 1 EKVDFALSLFEKPIAVGTVFAQNELIDTMAVTKGHGYKGVISRWGVTKLPRKTHKGLRKV 60
Query: 273 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
ACIGAWHPARV++TV RAGQ G+ HRTE NKK+Y++G G++ TE D
Sbjct: 61 ACIGAWHPARVAWTVPRAGQKGFFHRTETNKKIYRVGS-GEDKQNATTEAD 110
>gi|327311641|ref|YP_004338538.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
gi|326948120|gb|AEA13226.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
Length = 337
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 31/311 (9%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GS+G PRKRA+ +V+ +P + KP L F YK GM H V ++
Sbjct: 4 KINRPRRGSMGVYPRKRASDIVPRVRTWPDPNLGKPS-LLGFAAYKVGMLHAVVVEDRQT 62
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTP-RGLR-SLNTVWAQHLSEEVRRRFYKNW 142
S L KE +A T++E PP+ V+ Y P G R ++ VWA + ++V R
Sbjct: 63 SPLFGKEVVKAATVLEAPPLRVIAARLYTLDPTNGYRKAVGEVWAPEVPKDVYR------ 116
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
A ++++ + K I+A +K A VR + TQ R + G+ +K ++
Sbjct: 117 ------AVKTLPEKFDLEAELKRIEA----VKGMAVDVRAIVATQPR-LAGIGKKTPEIL 165
Query: 203 EIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
EI + G ++ +++ +A K++ + VF +++D++ +T+GKG++GV+ R+GV L
Sbjct: 166 EIPIGGVPSVEDRLKFALDMLGKEVRISDVFSAGQLVDVLAITRGKGWQGVIKRFGVKIL 225
Query: 262 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE----- 314
PR K +G R+ IG PA + FT R GQ G+H RTE NK++ K+G E
Sbjct: 226 PRWHKHRKGHRRTGTIGPQSPA-LMFTQPRPGQMGFHQRTEYNKRILKIGNNPAEINPKG 284
Query: 315 --SHTGITEFD 323
H G+ + D
Sbjct: 285 GWPHYGLVKSD 295
>gi|355571383|ref|ZP_09042635.1| ribosomal protein L3 [Methanolinea tarda NOBI-1]
gi|354825771|gb|EHF09993.1| ribosomal protein L3 [Methanolinea tarda NOBI-1]
Length = 337
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 146/294 (49%), Gaps = 23/294 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFP--KDDPSKPCRLTAFLGYKAGMTHIVRDVEK 82
K PR GSL F PRKRA + +++P + DP L F GYK GMTH++ +
Sbjct: 3 KINQPRKGSLAFSPRKRAKSPVPRYQSWPSYQGDPV----LQGFAGYKVGMTHVIMVDDH 58
Query: 83 PGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNW 142
S K+ VT++E PPM V + Y + G L VWA L + + +R
Sbjct: 59 KNSPTEGKDIMVPVTVVEIPPMKVAAIRAYSRDTYGRHPLTEVWAGELDKALGKRI---- 114
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
K+Y+ ++++ + K A + + HT ++ G+ +K +M
Sbjct: 115 ---------TLPKEYDFSGAMEALKDAIAK--GVAEEIFAVMHTLPGQVSGVPKKVPEIM 163
Query: 203 EIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 262
EI+V GGT+ ++ ++ G K++ + + Q DI VT GKG +G V RWG+
Sbjct: 164 EIRVAGGTVQQRFEFIAGLLGKEVHLKNIIQPGAYADITAVTTGKGTQGPVKRWGIKLRK 223
Query: 263 RKTHRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
RK RG +K V +G W+P V + V + GQ G+ RTE NK++ K+G+ G E
Sbjct: 224 RKHARGGKKRHVGNLGPWNPHHVRWQVPQMGQMGFQQRTEFNKRILKIGENGDE 277
>gi|48477712|ref|YP_023418.1| 50S ribosomal protein L3P [Picrophilus torridus DSM 9790]
gi|74567866|sp|Q6L1C7.1|RL3_PICTO RecName: Full=50S ribosomal protein L3P
gi|48430360|gb|AAT43225.1| large subunit ribosomal protein L3P [Picrophilus torridus DSM 9790]
Length = 329
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 141/281 (50%), Gaps = 26/281 (9%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 87
H R GS+ + PR RA R +G ++++P+ + ++ AF GYK GMTHI + S
Sbjct: 6 HSRRGSMAYYPRVRAKRIQGDIRSWPEIEGQ--TKVQAFAGYKVGMTHIQMVDYRKNSVT 63
Query: 88 HKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKK 147
+ VT++E PP+ V+ + Y + GL ++ WA+++ ++V RR K
Sbjct: 64 AGQVIMAPVTVVEVPPLTVMSIRYYARGDNGLEVISEEWAENIDKDVLRRINK------- 116
Query: 148 KAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVN 207
+ KK I+ K VR++ HT + + G+ K + EI++
Sbjct: 117 -----------INRHKKGIEV------KDVDDVRLMVHTNPQLVSGVPSKTPEIFEIRIG 159
Query: 208 GGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 267
G TI ++ YA I + +D+I VTKGKG++GVV R+GV LPRK +
Sbjct: 160 GSTIENRIKYAKERLGSNISFSDFSKPGNFVDVIAVTKGKGFQGVVKRFGVKLLPRKNRK 219
Query: 268 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
R + +G WHP V TV +AGQ G+H RT N ++ K
Sbjct: 220 HRRMIGTLGPWHPDWVRNTVPQAGQVGFHQRTIHNIRIIKF 260
>gi|389860647|ref|YP_006362887.1| 50S ribosomal protein L3P [Thermogladius cellulolyticus 1633]
gi|388525551|gb|AFK50749.1| 50S ribosomal protein L3P [Thermogladius cellulolyticus 1633]
Length = 396
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 165/341 (48%), Gaps = 55/341 (16%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFP-----------------KDDPSKPCRL 63
M HRK E PRHGSLG PRKRA+ +V+ +P K + K L
Sbjct: 1 MGHRKLEAPRHGSLGVRPRKRASELSVRVRTWPAKTWIELLEERYGSEVEKLNVVKRPTL 60
Query: 64 TAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLN 123
AF YKAGMTH + ++P + L K VT ++ PP++V+G+ YV L++
Sbjct: 61 LAFPVYKAGMTHAMVVEDRPHTPLTGKPVFTPVTALDAPPIVVLGLRTYVSENGSLKTYG 120
Query: 124 TVWAQHLSE--EVRRRFYKNWCKSKKKAFTKYSKQY------------------------ 157
W ++ EV +FYK+ K A ++Y
Sbjct: 121 EAWRSPVNAVAEVFEKFYKDNPFFKDAATKDIVRKYLSGLRKVNHGLVKPDPSGEYGFKF 180
Query: 158 -ETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVD 216
ETD + Q +K + +V + I + G+ +KK + EI+V GG I E
Sbjct: 181 IETDYESRLKQILTGDVKAVSLIV-----STIPVLSGIGKKKPEIFEIRVGGGKIDEITS 235
Query: 217 YAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVAC 274
YA + V VF + +++D+IGVTKGKG++GV+ R+GV LPR K +G RK
Sbjct: 236 YAEKVTGGYVSVTDVFIEGQLVDVIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK--- 292
Query: 275 IGAWHPARVSFT-VARAGQNGYHHRTEMNKKVYKLGKGGQE 314
IGA P + + +AGQ G+H RTE+NK++ K+G G E
Sbjct: 293 IGARSPGFGTMSEPPQAGQTGFHRRTELNKRILKIGASGLE 333
>gi|307595041|ref|YP_003901358.1| 50S ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
gi|307550242|gb|ADN50307.1| ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
Length = 342
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 154/295 (52%), Gaps = 24/295 (8%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K P+ GS+ + PRKRA + + +P P KP L F YKAGM H V ++P
Sbjct: 4 KIHRPKRGSMAYYPRKRAESLVARFRVWPDPHPGKPI-LLGFAAYKAGMAHAVVIDDRPT 62
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTP-RGLR-SLNTVWAQHLSEEVRRRFYKNW 142
S + KE + VTI++ PP+ V+ Y P + L+ SL VW + +++ R+
Sbjct: 63 SPFYGKEVVKPVTILDAPPIKVIAFRAYTYDPWKNLKLSLGEVWMPDVPKDILRK----- 117
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
+++ +E K I ++ I + VR + TQ R + G+ +K ++
Sbjct: 118 -------IPVLPEKFNKEEMMKKILDNVDVITE----VRAIVATQPR-LSGIGKKTPEIL 165
Query: 203 EIQVNG-GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
EI + G + + + +A K I ++ VF + + +D+ +TKGKG++GVV R+ V L
Sbjct: 166 EIPIGGVDDMNQIIKFADSILGKDININDVFSEGQYVDVAAITKGKGWQGVVKRFNVKIL 225
Query: 262 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
P+ K +G R++ IG +PA ++FT R GQ G H RTE NK++ ++G G E
Sbjct: 226 PKWHKHRKGYRRIGAIGPQNPA-LTFTTPRPGQMGLHKRTEYNKRILRIGMNGAE 279
>gi|161528317|ref|YP_001582143.1| 50S ribosomal protein L3P [Nitrosopumilus maritimus SCM1]
gi|160339618|gb|ABX12705.1| ribosomal protein L3 [Nitrosopumilus maritimus SCM1]
Length = 331
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 153/289 (52%), Gaps = 21/289 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M RK PR GSL + PR RA +++A+PK D +P ++ A G+KAG IV
Sbjct: 1 MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ K+ T++ TPP++++G+ GY K GL + V+A+ + + +
Sbjct: 60 DREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKSI------ 113
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
K+ K ++ D +KS L+KIK+ ++V + GL+QKK +
Sbjct: 114 -----AKEISLKNKQENALDNAEKS----LKKIKEIFAIVAISPSAA-----GLEQKKPY 159
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ E V+GG I ++ + K+I +D +F+ +D+ +TKGKG++GV+ RW V +
Sbjct: 160 IFEASVSGGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRWNVKK 219
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
K+ + +R+V +G P V +TV RAGQ G+H R E +K++ +G
Sbjct: 220 KQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFHQRVEYDKRIMIMG 268
>gi|410670351|ref|YP_006922722.1| 50S ribosomal protein L3P [Methanolobus psychrophilus R15]
gi|409169479|gb|AFV23354.1| 50S ribosomal protein L3P [Methanolobus psychrophilus R15]
Length = 337
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 143/288 (49%), Gaps = 19/288 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL + PRKRA H + ++P+ + +L F GYK GMTH++ + S
Sbjct: 7 PRRGSLAYSPRKRAKSHIPRFNSWPES--AGEPKLQDFAGYKVGMTHVILVDDVKNSLTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT++ETP + V + Y G +++ W+ L + + +
Sbjct: 65 GMEISVPVTVVETPAVRVAAIRAYASDSYGGKAIAEAWSSDLDPSLGKTIH--------- 115
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
K TD + I + +E S ++V+ +T + + G+ +K + +ME V+G
Sbjct: 116 ----LPKTATTDASLEKISSLIEN--GTVSDIKVVTYTLPKNLTGVPKKNSDIMETAVSG 169
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 267
+ + +YA +I + VF ID+ +T GKG +G V RWG++ + K R
Sbjct: 170 SDLKARFEYAKSILGSEIKISDVFNNGTFIDVAAITIGKGTQGPVKRWGISMMKGKHSRQ 229
Query: 268 -GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
LR++ +G +HPARV++ V + GQ GYH RT+ NK++ ++ G E
Sbjct: 230 GSLRQIGTLGPFHPARVNWRVPQMGQMGYHQRTDFNKRILRVSTNGDE 277
>gi|124484910|ref|YP_001029526.1| 50S ribosomal protein L3P [Methanocorpusculum labreanum Z]
gi|212288407|sp|A2SPK3.1|RL3_METLZ RecName: Full=50S ribosomal protein L3P
gi|124362451|gb|ABN06259.1| LSU ribosomal protein L3P [Methanocorpusculum labreanum Z]
Length = 333
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 147/288 (51%), Gaps = 22/288 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL + PRKRA K +++P+ + +P L F GYKAGMTH++ + S
Sbjct: 6 PRAGSLAYYPRKRAKGIVPKYQSWPEYN-GQPM-LQGFAGYKAGMTHVIMIDDHKKSPTE 63
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
KE VT+IE P M V + YVK G L VWA++L E + R K + K
Sbjct: 64 GKEVMVPVTVIEIPAMTVAAIRVYVKDTYGKHPLTEVWAENL-EALSGRITKAKTNNAAK 122
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
A K I A + + + V VL +T+ ++ G+ +K LMEI+V G
Sbjct: 123 ATEK-------------INAAIGDVVE----VMVLMYTKPTELTGVPKKVPDLMEIRVAG 165
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
G+ E+ DYA + + ++ + + DI G+TKGKG++G V R+G+T RK R
Sbjct: 166 GSAQERFDYALSILGTDVDMKSLLSEGQFADITGITKGKGFQGAVKRFGITLRKRKHART 225
Query: 269 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
R + +G W P V + V GQ G+ RTE NK++ K+G+ E
Sbjct: 226 KKERHIGTLGPWTPHHVRWQVPMPGQMGFQQRTEFNKRIIKIGENADE 273
>gi|407462403|ref|YP_006773720.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus koreensis AR1]
gi|407046025|gb|AFS80778.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus koreensis AR1]
Length = 331
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 153/289 (52%), Gaps = 21/289 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M RK PR GSL + PR RA +++A+PK D +P ++ A G+KAG IV
Sbjct: 1 MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ K+ T++ TPP++++G+ GY K GL + V+A+ + + +
Sbjct: 60 DREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKNI------ 113
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
K+ K ++ D +KS L+KIK+ ++V V GL+QKK +
Sbjct: 114 -----AKEISLKNKQENALDNAEKS----LKKIKEIFAIVAVSPSAA-----GLEQKKPY 159
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ E V+GG I ++ + K+I +D +F+ +D+ +TKGKG++GV+ RW V +
Sbjct: 160 VFEASVSGGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRWNVKK 219
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
K+ + +R+V +G P V +TV RAGQ G+H R E +K++ +G
Sbjct: 220 KQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFHQRIEYDKRIMIMG 268
>gi|340344791|ref|ZP_08667923.1| 50S ribosomal protein L3 [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519932|gb|EGP93655.1| 50S ribosomal protein L3 [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 330
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 155/290 (53%), Gaps = 24/290 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK+ PR GS + PR RA +++ +PK++ +P ++ A G+KAG +V
Sbjct: 1 MGHRKYAQPRRGSAAYYPRGRAKSMEARIRTWPKNNSDEP-KILAHCGFKAGCVQLVTID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ + K+ T++ TPP+ ++GV GY K GL + V+A+ + + +
Sbjct: 60 DREKTPNAGKQLVSLGTVLVTPPVSILGVRGYSKDHYGLHAEFDVYAKEFPKNISKEI-- 117
Query: 141 NWCKSKKKAFTKYSKQYETDEGK-KSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
++ EG ++ + L ++K+ ++V V GL+QKK
Sbjct: 118 ---------------NFKNKEGAMENAEKILGRVKEIFAIVAVSPRDA-----GLEQKKP 157
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
++ E V+GG I ++ + K+I +D +F+ ID+ +TKGKG++GV+ R+GV
Sbjct: 158 YIFEALVSGGDIKKQFAHVKELLGKEIKIDQIFETGATIDVAAITKGKGWQGVIQRFGVK 217
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+ K+ + +R+VA +G PA V ++V RAGQ G+H RTE +K++ +G
Sbjct: 218 KKQHKSRKTVREVASLGPISPASVMYSVPRAGQMGFHQRTEYDKRIMVIG 267
>gi|374630590|ref|ZP_09702975.1| LSU ribosomal protein L3P [Methanoplanus limicola DSM 2279]
gi|373908703|gb|EHQ36807.1| LSU ribosomal protein L3P [Methanoplanus limicola DSM 2279]
Length = 337
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 141/288 (48%), Gaps = 19/288 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL + PRKRA K +++ ++ +P +L F GYK GMTHIV + S
Sbjct: 7 PRRGSLAYSPRKRAKSQVPKYQSW-QECAGEP-KLQGFAGYKVGMTHIVMVDDHKNSPSE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
KE VTI+E PP+ + V Y K G + VWA L +++ R K
Sbjct: 65 GKEIAVPVTIVEIPPIKAMAVRAYTKDTYGKKVFAEVWADELDGKLKDRIS---IPKKNN 121
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
A K E E K I + VL HTQ + G+ +K +ME++V G
Sbjct: 122 AEENIQKINEAIEAGKVID------------IFVLVHTQPAMLTGVPKKVPDMMEMRVGG 169
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
G I D+A G F +++ ++ + + ID+ VT GKG G V RWG+ RK RG
Sbjct: 170 GDIKACFDHAIGLFGREVELEDIAGVGQYIDVTAVTTGKGTNGPVKRWGIPVRKRKHSRG 229
Query: 269 LRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+K + +G W P V + V + GQ GY RTE NK++ K+G +E
Sbjct: 230 KKKRHIGNLGPWTPHHVRWQVPQIGQMGYQQRTEFNKRILKVGDNPEE 277
>gi|329765069|ref|ZP_08256653.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138446|gb|EGG42698.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 330
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 153/289 (52%), Gaps = 22/289 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK+ PR GS + PR RA +++ +P ++ +P ++ A G+KAG +V
Sbjct: 1 MGHRKYAQPRRGSAAYYPRGRAKSMEARIRTWPTNNSDEP-KILAHCGFKAGCVQLVTID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ + K+ T++ TPP+ ++G+ GY K GL + V+A + + +
Sbjct: 60 DRDKTPNAGKQLVSLGTVLVTPPVSILGIRGYSKDHYGLHAEFDVYANEFPKSISKEIN- 118
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
K+K+ A K L ++K+ ++V V + GL+QKK +
Sbjct: 119 --LKNKEGALENAEKI-------------LGRVKEIFAIVAVSP-----RAAGLEQKKPY 158
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ E V+GG I ++ + K+I +D +F+ ID+ +TKGKG++GV+ R+GV +
Sbjct: 159 IFEALVSGGDIKKQFAHVKELLGKEIKIDQIFETGATIDVAAITKGKGWQGVIQRFGVKK 218
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
K+ + +R+VA +G PA V ++V RAGQ G+H RTE +KK+ +G
Sbjct: 219 KQHKSRKTVREVASLGPISPASVMYSVPRAGQMGFHQRTEYDKKIMVIG 267
>gi|305662572|ref|YP_003858860.1| 50S ribosomal protein L3 [Ignisphaera aggregans DSM 17230]
gi|304377141|gb|ADM26980.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230]
Length = 340
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 164/299 (54%), Gaps = 25/299 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M+HRK P+ GSLG PRKRA+ VK++P+ KP L F+GYK GMTH++
Sbjct: 1 MAHRKTHAPKRGSLGLRPRKRASEIIPTVKSWPEISLDKPLPL-GFIGYKVGMTHVIMID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRSLNTVWAQHLSE-EVRRRF 138
++PGS KE VTIIETPP++ + + Y K G L+ +W + E E+ RR
Sbjct: 60 DRPGSPTEGKEIFMPVTIIETPPIIPIALRTYTKDSLGYLKVFTDIWIEPPKELEIWRRV 119
Query: 139 YKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKK 198
Y+ + ++ + I+ ++ IK+ V ++ T + + GL +K
Sbjct: 120 ------------VTYNPTRDIEKRIEMIERNIDIIKR----VSIIVATNPKNVGGLSKKV 163
Query: 199 AHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 258
+ EI + G +I E+ YAY K I ++ VF + IDIIGVTKGKG++GV+ R+GV
Sbjct: 164 PDIAEIAIGGSSINERFKYAYEVLGKPIHINQVFNVGQFIDIIGVTKGKGFQGVIKRFGV 223
Query: 259 TRLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKVYKLGKGGQE 314
LPR K +G R+ IG+ P + + +AGQ G+H RTE NK++ +G G+E
Sbjct: 224 KELPRWHKHRKGSRR---IGSRSPTIGAMSETPQAGQMGFHRRTEYNKRILAMGDKGEE 279
>gi|398021160|ref|XP_003863743.1| ribosomal protein L3, putative, partial [Leishmania donovani]
gi|322501976|emb|CBZ37060.1| ribosomal protein L3, putative, partial [Leishmania donovani]
Length = 106
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 89/106 (83%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVW 126
++PGSK++KKE E VTI+E PPM++VG+VGY +TP GL+++ TVW
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVW 106
>gi|73667662|ref|YP_303677.1| 50S ribosomal protein L3P [Methanosarcina barkeri str. Fusaro]
gi|109893521|sp|Q46G95.1|RL3_METBF RecName: Full=50S ribosomal protein L3P
gi|72394824|gb|AAZ69097.1| LSU ribosomal protein L3P [Methanosarcina barkeri str. Fusaro]
Length = 337
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 141/288 (48%), Gaps = 19/288 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
P+ GSL F PRKRA H + +A+P + + RL F GYK GMTH++ + S
Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPRLQGFAGYKVGMTHVIMVDDTKNSLTQ 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTIIETP + V + Y + G +++ VWA L E++RR + +
Sbjct: 65 GMEISVPVTIIETPAIRVAAIRAYAEDTAGEKAIAEVWATDLDPELKRRIPVPKGDNMAE 124
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
K E EGK S +R + +T + + G+ +K +ME ++
Sbjct: 125 TLGNIGKMIE--EGK-------------VSDIRAVTYTLPKSLTGVPKKTPDIMESGISA 169
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 267
+ K +YA + + VF+ +ID +T GKG +G RWG+ + K R
Sbjct: 170 RDLNTKFEYAKSILGTLVSITDVFKTGTLIDTAAITIGKGTQGPAKRWGIQLMKGKHSRQ 229
Query: 268 -GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
LR++ +G + RVS+ V + GQ GYH RTE NK++ K+G G+E
Sbjct: 230 GSLRQIGTLGGFGLRRVSWRVPQMGQTGYHQRTEFNKRILKIGSDGEE 277
>gi|91772083|ref|YP_564775.1| 50S ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
gi|121689445|sp|Q12ZV1.1|RL3_METBU RecName: Full=50S ribosomal protein L3P
gi|91711098|gb|ABE51025.1| LSU ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
Length = 337
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 147/288 (51%), Gaps = 19/288 (6%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL + PRKR+ H + +++P+ D ++P +L F GYK GMTH++ + S
Sbjct: 7 PRRGSLAYSPRKRSQSHIPRFRSWPESD-AEP-KLQGFAGYKVGMTHVIMIDDVKHSLTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VTIIETP + V + Y K G ++ W L +++ RR
Sbjct: 65 GTEISVPVTIIETPAIRVAAIRAYGKDTYGEIAIAEAWTDVLDKDLSRRL---------- 114
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
K +K + + + ++ +E + A+ +R++ +T + G+ +K +ME V+G
Sbjct: 115 ---KTAKNPDVNASLEKLETLVESGR--ANDIRLITYTLPSTLTGVPKKVPDVMETGVSG 169
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 267
+ K +YA + + VF +++D+ +T G G +G V RWG+ + K R
Sbjct: 170 SDVKAKFEYAKTVLGTMVEISDVFDNGKIVDVAAITTGHGTQGPVKRWGINLMKNKHSRQ 229
Query: 268 -GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
LR+V +G W PA VS+ V +AGQ GYH RT+ NK++ K+ E
Sbjct: 230 GSLRQVGTLGPWTPAHVSWRVPQAGQMGYHQRTDYNKRILKMSSDVDE 277
>gi|393796608|ref|ZP_10379972.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia BG20]
Length = 330
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 153/289 (52%), Gaps = 22/289 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK+ PR GS + PR RA +++ +P ++ +P ++ A G+KAG +V
Sbjct: 1 MGHRKYAQPRRGSAAYYPRGRAKSMEARIRTWPTNNSDEP-KILAHCGFKAGCVQLVTID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ + K+ T++ TPP+ ++G+ GY K GL + V+A + + +
Sbjct: 60 DRDKTPNAGKQLVSLGTVLVTPPVSILGIRGYSKDHYGLHAEFDVYANEFPKSISKEIN- 118
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
K+K+ A K L ++K+ ++V V + GL+QKK +
Sbjct: 119 --LKNKEGALENAEKI-------------LGRVKEIFAIVAVSP-----RAAGLEQKKPY 158
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ E V+GG + ++ + K+I +D +F+ ID+ +TKGKG++GV+ R+GV +
Sbjct: 159 IFEALVSGGDVKKQFAHVKELLGKEIKIDQIFETGATIDVAAITKGKGWQGVIQRFGVKK 218
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
K+ + +R+VA +G PA V ++V RAGQ G+H RTE +KK+ +G
Sbjct: 219 KQHKSRKTVREVASLGPISPASVMYSVPRAGQMGFHQRTEYDKKIMVIG 267
>gi|390938993|ref|YP_006402731.1| 50S ribosomal protein L3 [Desulfurococcus fermentans DSM 16532]
gi|390192100|gb|AFL67156.1| ribosomal protein L3 [Desulfurococcus fermentans DSM 16532]
Length = 396
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 173/340 (50%), Gaps = 51/340 (15%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDD------------------PSKPCR 62
M HRK PRHGSLG PRKRA +VK +P+ ++P
Sbjct: 1 MGHRKLHAPRHGSLGVRPRKRAEELTPRVKRWPEKSWFDILVERLGNEATSQGVVARPV- 59
Query: 63 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRS 121
L F YKAGMTH + ++P + + KE VTI++ PP++V+GV Y+ G L++
Sbjct: 60 LLGFPVYKAGMTHAIIVEDRPNTPVTGKEVFTPVTILDAPPIVVLGVRTYIIDEEGYLKT 119
Query: 122 LNTVWAQHLSEEVRRRFYKNWCK------SKKKAFTKY----------------SKQYET 159
W + + V + F + + S K KY S +Y
Sbjct: 120 KGEAW-RSPHDAVAKAFEELYAGIPLMGISVKDVVRKYLHGLRKVNHGLVKPEPSSEYGF 178
Query: 160 DEGKKSIQAQL-EKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYA 218
+S +++L + + + VRV+A T I + G+ +KK ++E+++ GG+I E++ YA
Sbjct: 179 KFVAESSESELRDALSGEIADVRVIAST-IPVLSGIGKKKPEIIELKIGGGSIDERLKYA 237
Query: 219 YGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIG 276
G + VF + + +D+IGVTKGKG++GVV R+GV LPR K +G RK IG
Sbjct: 238 EGILGGYVKASDVFMEGQFVDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK---IG 294
Query: 277 AWHPARVSFT-VARAGQNGYHHRTEMNKKVYKLGKGGQES 315
A P + + +AGQ G+H RTE NK++ K+G G E+
Sbjct: 295 ARSPGFGTMSEPPQAGQMGFHRRTEYNKRILKMGLNGLET 334
>gi|386876303|ref|ZP_10118425.1| ribosomal protein L3, partial [Candidatus Nitrosopumilus salaria
BD31]
gi|386805879|gb|EIJ65376.1| ribosomal protein L3, partial [Candidatus Nitrosopumilus salaria
BD31]
Length = 296
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 154/290 (53%), Gaps = 24/290 (8%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M RK+ PR GSL + PR RA +++++PK + +P ++ A G+KAG +V
Sbjct: 1 MGARKYHQPRRGSLAYSPRIRAKSMEARIRSWPKLNSEEP-KILAHCGFKAGCVQLVTID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF-Y 139
++ K+ T++ TPP++++G+ GY K G + V+A+ + + + +
Sbjct: 60 DRDKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHYGAHAEFDVYAEDIPKNIAKEITI 119
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
KN S + A + +L KIK+ ++V V + GL+QKK
Sbjct: 120 KNIEGSIENA-----------------EKRLGKIKEIFAIVAVSP-----RAAGLEQKKP 157
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
++ E V+GG I ++ + K+I +D +F+ +D+ +TKGKG++GV+ RWGV
Sbjct: 158 YIFEASVSGGDIQKQFTHVKELLGKEIKIDQIFETGATVDVAAITKGKGWQGVIQRWGVK 217
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+ K+ + +R+V +G P V +TV RAGQ G+H RTE +K++ +G
Sbjct: 218 KKQHKSRKTVREVGSLGPISPQSVMYTVPRAGQMGFHQRTEYDKRIMVMG 267
>gi|146302876|ref|YP_001190192.1| 50S ribosomal protein L3P [Metallosphaera sedula DSM 5348]
gi|172046889|sp|A4YCW6.1|RL3_METS5 RecName: Full=50S ribosomal protein L3P
gi|145701126|gb|ABP94268.1| LSU ribosomal protein L3P [Metallosphaera sedula DSM 5348]
Length = 341
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 146/293 (49%), Gaps = 23/293 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK PR GS G PRKR+ +++P+ + P L F+GYK GMTHI
Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRSEELLPSPRSYPEVNLPNPVTL-GFVGYKVGMTHIFMID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRS-LNTVWAQ--HLSEEVRRR 137
E S + KE VT++ETPP+ V+ + Y RG S + VW + + RR
Sbjct: 60 EDRSSSMFGKEIYVPVTVLETPPIYVLALRAYGLNNRGEHSVMGEVWGDLGDFGKFITRR 119
Query: 138 FYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQK 197
+KK + K I++ LE + S R+L TQ + L +K
Sbjct: 120 IRGLKIDKEKK-----------EHQLKDIESNLESV----SYFRLLVSTQPHLIPALGKK 164
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 257
++E+Q+ GG +++Y + V VF++ +++DIIGVTKG G++GV+ R+G
Sbjct: 165 TPDIVEVQIGGGNTKNQLEYGLKLLGNTLSVRDVFKEGQLMDIIGVTKGHGFQGVIKRYG 224
Query: 258 VTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
V LPR K +G RKV G V + GQ G+H RTE NK++ K+
Sbjct: 225 VQELPRWHKHRKGSRKVGTKGPS--LGTPSYVPQPGQMGFHRRTEYNKRILKI 275
>gi|435852138|ref|YP_007313724.1| archaeal ribosomal protein L3 [Methanomethylovorans hollandica DSM
15978]
gi|433662768|gb|AGB50194.1| archaeal ribosomal protein L3 [Methanomethylovorans hollandica DSM
15978]
Length = 337
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 151/302 (50%), Gaps = 21/302 (6%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL F PRKRA + +++P D ++ F GYK GMTH+V +
Sbjct: 3 KGHRPRRGSLAFSPRKRAQSPIPRYRSWPVSDAG--IKIQDFAGYKVGMTHVVIIDDTKN 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S E VT+IETP + V + Y K G R+L W + L + +
Sbjct: 61 SLTEGLEITVPVTVIETPAIRVAAIRAYGKDTVGERALAEAWTKELDTSLAQTI------ 114
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
K +++T+ I+ + + K S +RV+ +T + + G+ +K A +ME
Sbjct: 115 -------KVPLKHDTNAALGKIEQLMNEGK--VSDIRVVTYTLPKSITGVPKKNADIMET 165
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
++G +K +YA K++ + VF+ ++D+ +T GKG +G V RWG+ K
Sbjct: 166 GISGANSKDKYEYAKSILGKEVRISDVFKGGSLVDVAAITIGKGTQGPVKRWGIMLQKGK 225
Query: 265 THR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHT--GIT 320
R LR++ +G + PA V++ V + GQ G+H RTE NK+++K+G +E + G T
Sbjct: 226 HSRQGSLRQIGTLGPFRPAHVNWRVPQMGQTGFHQRTECNKRIFKIGTNPEEINPVGGFT 285
Query: 321 EF 322
F
Sbjct: 286 NF 287
>gi|124028157|ref|YP_001013477.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
gi|123978851|gb|ABM81132.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
Length = 319
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 153/275 (55%), Gaps = 26/275 (9%)
Query: 49 VKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVG 108
+K++P+ P L AFL YK GMTH+ ++PGS H +E VT++E PPM+V
Sbjct: 1 MKSWPEVQSENPLPL-AFLAYKVGMTHVYVIDDEPGSITHGREIFMPVTVLEAPPMVVTA 59
Query: 109 VVGYVKTPR-GLRSLNTVWAQH--LSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKS 165
V Y P GL +L+ WAQ L E+ Y+ + + + D+ K
Sbjct: 60 VRVYGYDPNIGLYTLSEAWAQPETLVEKYNLDIYRVVPRLRFP---------DPDKAVKK 110
Query: 166 IQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGT-IAEKVDYAYGFFEK 224
++ L+K+ VR++A TQ R + GL +KK L+EI++ GG+ I ++ +YA
Sbjct: 111 LEGLLDKVYD----VRIIAATQPRLVGGLSKKKPDLLEIKIGGGSSIEDRFNYAVKLLGS 166
Query: 225 QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPAR 282
++ V VF++ + +D+I VTKGKG++GV+ R+GV LPR K +G R + G PA
Sbjct: 167 ELKVSDVFREGQFVDVIAVTKGKGFQGVIKRFGVKELPRWHKHRKGSR--SGPGTRGPA- 223
Query: 283 VSFT---VARAGQNGYHHRTEMNKKVYKLGKGGQE 314
SF+ V + GQ G+H RTE NK++ K+G G E
Sbjct: 224 TSFSWSEVPQPGQMGFHRRTEYNKRILKIGDNGLE 258
>gi|320101368|ref|YP_004176960.1| 50S ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
gi|319753720|gb|ADV65478.1| LSU ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
Length = 396
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 168/342 (49%), Gaps = 55/342 (16%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDD------------------PSKPCR 62
M HRK PRHGSLG PRKRA +V+ +P+ +KP
Sbjct: 1 MGHRKLHAPRHGSLGVRPRKRAEELTPRVRRWPEKSWFDIVVERLGSEAASRGIAAKPV- 59
Query: 63 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG---- 118
L F YKAGMTH V ++P + + KE VTI++ PP++V+GV YV G
Sbjct: 60 LLGFPVYKAGMTHAVVVEDRPNTPVSGKEVFTPVTILDAPPIVVLGVRTYVVGEDGYLKA 119
Query: 119 ------------------LRSLNTVWAQHLSEEVRRRFYK----NWCKSKKKAFTKYSKQ 156
L + N ++ + + VR+ Y N K +Y +
Sbjct: 120 KGEAWRSPVDAVLKAYEELYAGNPLFNMNGRDVVRKYLYGLRRLNHGLVKPDPSGEYGFK 179
Query: 157 YETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVD 216
+ + G+K ++ E + VRV+A T I G+ +KK ++E+++ GG+I E++
Sbjct: 180 FIAESGEKEVK---EVFSGEVADVRVIAST-IPVFSGIGKKKPEIVELKIGGGSIDERLR 235
Query: 217 YAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVAC 274
Y + VF + + ID+IGVTKGKG++GVV R+GV LPR K +G RK
Sbjct: 236 YGESILGGYVKAADVFMEGQFIDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK--- 292
Query: 275 IGAWHPARVSFT-VARAGQNGYHHRTEMNKKVYKLGKGGQES 315
IGA P + + +AGQ G+H RTE NK++ ++G G E+
Sbjct: 293 IGARSPGFGTMSEPPQAGQMGFHRRTEYNKRILRIGLNGLEA 334
>gi|156937755|ref|YP_001435551.1| 50S ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
gi|156566739|gb|ABU82144.1| LSU ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
Length = 358
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 157/300 (52%), Gaps = 22/300 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M RK E PR GS G PRKRAA +V+++P D KP AFLGYK GMTH++
Sbjct: 1 MGARKKEAPRRGSAGLRPRKRAASIVPRVRSWPSIDEVKPL---AFLGYKVGMTHVIMID 57
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTP-RGLRSLNTVW-------AQHLSE 132
++ +E VT+IETPPM+V+G Y P RG +L VW + L E
Sbjct: 58 DREHVDTAGQEIFVPVTVIETPPMVVLGARVYGYDPNRGRYALTEVWRNPSDTIKEKLGE 117
Query: 133 EVRRRFYKNWCKSKKKAFTKYS--KQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRK 190
EV R++ K + K +E +K + EK+ ++ +
Sbjct: 118 EVLRKYLLGMSKRLPHMVEELGPGKGFEFKVPEKELDVDPEKVVGVGLIMSSIPFLA--- 174
Query: 191 MKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYE 250
G+ +K ++E++V GG+ E ++YA G + + V+ V + + +D+IGVTKGKG++
Sbjct: 175 -GGVSKKAPDILEVKV-GGSPVEALEYAKGKLGQLVDVEEVIEAGKFVDVIGVTKGKGFQ 232
Query: 251 GVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
GV+ R+GV LP+ K +G R+V +W S+ V + GQ GYH RT+ NK+V +
Sbjct: 233 GVIKRFGVKELPKWHKHRKGSRRVGA-RSWGKGTSSY-VPQPGQMGYHRRTDYNKRVLMI 290
>gi|218884488|ref|YP_002428870.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
gi|218766104|gb|ACL11503.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
Length = 396
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 172/339 (50%), Gaps = 51/339 (15%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDD------------------PSKPCR 62
M HRK PRHGSLG PRKRA +VK +P+ ++P
Sbjct: 1 MGHRKLHAPRHGSLGVRPRKRAEELTPRVKRWPEKSWFDILVERLGNEAASQGVVARPV- 59
Query: 63 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRS 121
L F YKAGMTH + ++P + + KE VTI++ PP++V+GV Y+ G L++
Sbjct: 60 LLGFPVYKAGMTHAIIVEDRPNTPVTGKEVFTPVTILDAPPIVVLGVRTYIIDEEGYLKT 119
Query: 122 LNTVWAQHLSEEVRRRFYKNWCK------SKKKAFTKY----------------SKQYET 159
W + + + + F + + S K KY S +Y
Sbjct: 120 KGEAW-RSPYDAIAKAFEELYAGIPLIGISVKDVVRKYLHGLRKVNHGLVKPEPSSEYGF 178
Query: 160 DEGKKSIQAQL-EKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYA 218
+S +++L + + + VRV+A T I + G+ +KK ++E+++ GG+I E++ YA
Sbjct: 179 KFVAESSESELRDALSGEIADVRVIAST-IPVLSGIGKKKPEIIELKIGGGSIDERLKYA 237
Query: 219 YGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIG 276
G + VF + + +D+IGVTKGKG++GVV R+GV LPR K +G RK IG
Sbjct: 238 EGILGGYVRASDVFMEGQFVDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK---IG 294
Query: 277 AWHPARVSFT-VARAGQNGYHHRTEMNKKVYKLGKGGQE 314
A P + + +AGQ G+H RTE NK++ K+G G E
Sbjct: 295 ARSPGFGTMSEPPQAGQMGFHRRTEYNKRILKMGLNGLE 333
>gi|383319753|ref|YP_005380594.1| 50S ribosomal protein L3 [Methanocella conradii HZ254]
gi|379321123|gb|AFD00076.1| LSU ribosomal protein L3P [Methanocella conradii HZ254]
Length = 341
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 150/296 (50%), Gaps = 21/296 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH PR GSL + PR RA + K + + + + ++ + +G+KAGM+H++
Sbjct: 1 MSHP--HAPRRGSLAYSPRVRARSQKPKYRNW--AELGEQPKIQSLIGFKAGMSHVLMID 56
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++P S E VTIIE P M V G+ Y P G + + WA L + R
Sbjct: 57 DRPHSTTEGMEIAVPVTIIEAPAMHVAGIRAYDDGPYGKKVIAEAWASDLKDLAR----- 111
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+ ++ +G+ + A L K K A + R+L + + + G+ +K
Sbjct: 112 ---------LIRLPRKAVDTDGQLAKIAGLVKEGKVADL-RLLTYVKTEDVSGIPKKVPE 161
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+E ++ GG++ ++ + A KQ+ + +F E++D+ +TKGKG +G V RWG+
Sbjct: 162 LVENRIAGGSMDKRFELAKSLLGKQVKANDIFSPGELVDVSAITKGKGTQGPVKRWGIAI 221
Query: 261 LPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
RK R R V +G W+P R+ + V + GQ GYH RTE NK++ KLG +E
Sbjct: 222 QKRKHARTGKRRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRIIKLGDKAEE 277
>gi|3914741|sp|Q29293.1|RL3_PIG RecName: Full=60S ribosomal protein L3
Length = 130
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 79/87 (90%)
Query: 225 QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 284
++PV+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPAR +
Sbjct: 1 RVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXA 60
Query: 285 FTVARAGQNGYHHRTEMNKKVYKLGKG 311
F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 61 FSVARAGQKGYHHRTEINKKIYKIGQG 87
>gi|15790632|ref|NP_280456.1| 50S ribosomal protein L3P [Halobacterium sp. NRC-1]
gi|169236371|ref|YP_001689571.1| 50S ribosomal protein L3P [Halobacterium salinarum R1]
gi|42559695|sp|Q9HPD4.3|RL3_HALSA RecName: Full=50S ribosomal protein L3P
gi|226725182|sp|B0R656.1|RL3_HALS3 RecName: Full=50S ribosomal protein L3P
gi|10581159|gb|AAG19936.1| 50S ribosomal protein L13P [Halobacterium sp. NRC-1]
gi|167727437|emb|CAP14225.1| 50S ribosomal protein L3 [Halobacterium salinarum R1]
Length = 335
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 150/294 (51%), Gaps = 24/294 (8%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GS+GF PRKRA + ++P DD L F GYKAGMTH+V +K +
Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 64
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
ET VT++ETPPM V Y TP G + L VWA E + R
Sbjct: 65 GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDR------------ 112
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
+ + +TDE +++ E+I +RV+ HT G+ +K +ME +V G
Sbjct: 113 TLSVPDEGGDTDELIEALDT--EEIAD----IRVITHTVPGDTAGVPKKNPDVMETRVGG 166
Query: 209 GTIAEKVDYAYGFFEKQI--PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
GT+A+++++A E VF+ E D G+TKGKG +G V RWGV + K
Sbjct: 167 GTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHA 226
Query: 267 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTG 318
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ + G + + G
Sbjct: 227 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDEPTPDG 280
>gi|359416216|ref|ZP_09208568.1| 50S ribosomal protein L3P [Candidatus Haloredivivus sp. G17]
gi|358033419|gb|EHK01972.1| 50S ribosomal protein L3P [Candidatus Haloredivivus sp. G17]
Length = 323
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 29/288 (10%)
Query: 30 RHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 89
R GSL + P+ RA R + + D KP + GYK GMT ++R V+
Sbjct: 8 RSGSLAYKPKVRADRIYPDINTWEDTDELKPL---GYAGYKVGMTRVLR-VDDTEGATKG 63
Query: 90 KETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKA 149
+E + VTI+E PP+ V G Y + P + E+V F + W +S K
Sbjct: 64 QEVADPVTILEAPPLRVYGARFYTEDP------------NSGEQV---FTEAWTESPSKE 108
Query: 150 FTKYSKQYETDEGKKSIQAQLEKIKKYA---SVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
Q TD K+ +EK K + + V++L HTQ + GL +KK E+ +
Sbjct: 109 L-----QRATDIPKEGNLDNMEKAKDNSESLTDVKLLVHTQPSRA-GLSKKKPANFELGL 162
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
GG++ E ++YA K+I VF+ E D++ VTKGKG EG V R+G+ +L KT
Sbjct: 163 -GGSVEEILEYAEEMIGKEIEFSDVFEVGEYSDVVAVTKGKGVEGPVQRYGIKKLSHKTQ 221
Query: 267 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
+ RK +G WHP ++S+ + GQ G+++RTE+NK++ G+ +E
Sbjct: 222 KKRRKAGNVGPWHPDQLSWRIPLPGQQGFNNRTEINKRILDFGEDPEE 269
>gi|291333648|gb|ADD93339.1| ribosomal protein L3 [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 348
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 150/283 (53%), Gaps = 10/283 (3%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+G+ PRKR R ++ ++P+ + S+ R+ F G+KAGMTHI+ P S +E
Sbjct: 1 MGYGPRKRTVRQYPRITSWPETEASE-VRVQGFAGWKAGMTHILMRDTNPKSTSAGQEVR 59
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
+AVT++E PPM V+ V GY TP G ++ VW +SEE + + +
Sbjct: 60 KAVTVVEAPPMTVLAVRGYRMTPYGKQTAGEVWT-DVSEESPTNLFPRLANQTRGERDEE 118
Query: 154 SKQYETDEGKKSIQAQLEKIKKYA--------SVVRVLAHTQIRKMKGLKQKKAHLMEIQ 205
+ G + + + +++ A S VR++ TQ ++ + K +ME+
Sbjct: 119 QGRKPAKRGGRIPKRPSKPLEEAANSLRQQDLSEVRLIVCTQPESVRSVPSKTPEIMEMG 178
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
+ GG I K+++A +I ++ V+ + +D++GVTKGKG++G + R+G+ L K
Sbjct: 179 LTGGDIEAKLEWALERLGGEIGIEDVYDVGQEVDVVGVTKGKGWQGSIKRFGLKLLSHKN 238
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
+ R+ +G + V T+ +AGQ GYH RTE+NKK+ ++
Sbjct: 239 SKRRRQGGNMGDFGTGYVRKTIRQAGQVGYHKRTELNKKILRI 281
>gi|397780844|ref|YP_006545317.1| 50S ribosomal protein L3P [Methanoculleus bourgensis MS2]
gi|396939346|emb|CCJ36601.1| 50S ribosomal protein L3P [Methanoculleus bourgensis MS2]
Length = 337
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 148/297 (49%), Gaps = 29/297 (9%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K+ PR GSL + PRKRA ++P+ + + F GYK GMTH+V +
Sbjct: 3 KYNRPRRGSLAYSPRKRAKSPVPGYGSWPEY--TGVPTVQGFAGYKVGMTHVVMVDDHKS 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S K+ VT++E PPM V GV Y + G +L W L EE+ RR
Sbjct: 61 SPTEGKDVMVPVTVVEVPPMRVAGVRAYCEDTYGKHALTEAWTTDLDEELSRRI------ 114
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRV-----LAHTQIRKMKGLKQKKA 199
K ++T A L+ I+K RV + +TQ + G+ +K
Sbjct: 115 -------TIPKNHDT-------VAALDAIRKAIGEGRVTELYAITYTQPDALTGVPKKVP 160
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
LME+++ GG++ ++++YA G K+I + F+ E ID+ VT GKG EG V RWGV
Sbjct: 161 DLMEMRIAGGSLDDQIEYAAGILGKEIEITGNFEAGEYIDVTAVTTGKGTEGPVKRWGVQ 220
Query: 260 RLPRKTHRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
RK RG +K + +G WHP V + V + GQ GY RTE NK++ K+G G +
Sbjct: 221 VRKRKHSRGGKKRHIGNLGPWHPHHVRWQVPQIGQMGYQQRTEFNKRILKIGTNGDD 277
>gi|156359545|ref|XP_001624828.1| predicted protein [Nematostella vectensis]
gi|156211630|gb|EDO32728.1| predicted protein [Nematostella vectensis]
Length = 94
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 75/85 (88%)
Query: 227 PVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFT 286
PV VF DEMID+IGVTKG G++GV RWG +LPRKTH+GLRKVACIGAWHPARVSF+
Sbjct: 1 PVRKVFSPDEMIDVIGVTKGHGFKGVTYRWGTKKLPRKTHKGLRKVACIGAWHPARVSFS 60
Query: 287 VARAGQNGYHHRTEMNKKVYKLGKG 311
VARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 61 VARAGQAGYHHRTELNKKIYRIGQG 85
>gi|296242583|ref|YP_003650070.1| 50S ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
gi|296095167|gb|ADG91118.1| LSU ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
Length = 395
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 164/338 (48%), Gaps = 49/338 (14%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFP-------------KDDP-----SKPCR 62
M HRK PR GSLG PRKRA +V+ +P KD SKP
Sbjct: 1 MGHRKLHAPRRGSLGVRPRKRAEELTPRVRTWPAKTWAELLLEKYGKDAEKHGVVSKPV- 59
Query: 63 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGY-VKTPRGLRS 121
L F YKAGMTH + ++P + KE VTI++ PPM+++G+ Y V GL S
Sbjct: 60 LLGFAAYKAGMTHALMVEDRPNTPFTGKEVFTPVTILDAPPMVILGLRAYSVGEQGGLVS 119
Query: 122 LNTVW---AQHLSEEVRRRFYKN-------------WCKSKKKAFTKYSKQYETDE-GKK 164
L W + + + + KN + + +K K T + G K
Sbjct: 120 LGEAWRSPVEAVGKAYEEYYSKNPLLTERVDSVVRKYLQGLRKLNHGLVKPDPTGKYGFK 179
Query: 165 SIQAQLEKIKKYASV-----VRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAY 219
++ E+ K VR LA T I + G +KK ++EI++ GG + E V Y
Sbjct: 180 FVETNWEEAFKKVFTGNVVEVRALAST-IPVLSGFAKKKPEIVEIKIGGGKVEEIVKYGE 238
Query: 220 GFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGA 277
+ V VF + + ID+IGVTKGKG++GVV R+GV LPR K +G RK IG+
Sbjct: 239 SVLGGLVTVRDVFTEGQFIDVIGVTKGKGFQGVVKRFGVKVLPRWHKHRKGARK---IGS 295
Query: 278 WHPARVSFT-VARAGQNGYHHRTEMNKKVYKLGKGGQE 314
PA + + +AGQ G+H RT+ NK++ ++G G E
Sbjct: 296 RSPAFGTMSEPPQAGQTGFHRRTDYNKRILRIGFNGLE 333
>gi|37654302|gb|AAQ96256.1| LRRGT00043 [Rattus norvegicus]
Length = 867
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 83/103 (80%)
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
GT+AEK+D+A P++ VF + EMID++G+TKGKGY+GV +RW + PRKTH+G
Sbjct: 327 GTVAEKLDWAREAAGAAGPLNQVFGQGEMIDVMGMTKGKGYKGVTSRWHTKKPPRKTHQG 386
Query: 269 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LRKVACIGAW PA V+F+VARAGQ GYHH+TE NKK+YK+G+G
Sbjct: 387 LRKVACIGAWLPAHVAFSVARAGQKGYHHQTETNKKIYKIGQG 429
>gi|302348734|ref|YP_003816372.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
gi|302329146|gb|ADL19341.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
Length = 329
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 142/277 (51%), Gaps = 24/277 (8%)
Query: 37 LPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAV 96
+PRKR++ V ++P+ KP L F+GYKAGMTH + GS KE +
Sbjct: 1 MPRKRSSEFVPSVSSWPEVSAQKPT-LLGFIGYKAGMTHAFIVDNRQGSPTFGKEVFRPI 59
Query: 97 TIIETPPMMVVGVVGY-VKTPRGLRSLNTVWAQH-LSEEVRRRFYKNWCKSKKKAFTKYS 154
T++E PP+ V+ V GY RGL ++ WA+ L E+ RR S AF
Sbjct: 60 TVLEAPPIFVLAVRGYGYDENRGLYTVGEAWARPPLDLELERRI------SAIGAF---- 109
Query: 155 KQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVN--GGTIA 212
+T K ++A L IK+ VRVL TQ + GL +K L+E++V G +
Sbjct: 110 ---DTQSMLKKLEASLSDIKE----VRVLVATQPKLTGGLSKKSPDLLEVKVASPGSDVK 162
Query: 213 EKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 272
DYA K + V VFQ M+D+I VTKGKG++G V R+GV LPR H+ +K
Sbjct: 163 AAFDYATSILGKTLSVGEVFQPGLMVDVIAVTKGKGFQGDVKRFGVKVLPR-WHKHRKKA 221
Query: 273 ACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
IGA H + + GQ G+H RTE NK++ +
Sbjct: 222 RGIGARSHGKGTWWEIPNPGQLGFHRRTEYNKRILDI 258
>gi|169626513|ref|XP_001806656.1| hypothetical protein SNOG_16548 [Phaeosphaeria nodorum SN15]
gi|111054968|gb|EAT76088.1| hypothetical protein SNOG_16548 [Phaeosphaeria nodorum SN15]
Length = 91
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 74/84 (88%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL FLPRKRAARHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPM 104
++PG+KLHKKE EA T+IETPP+
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPV 84
>gi|449708742|gb|EMD48143.1| 60S ribosomal protein L3, partial [Entamoeba histolytica KU27]
Length = 121
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 88/120 (73%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSL F PRKR + R V AFPKD+ ++ LT FLG+KAGMTH++R+V
Sbjct: 1 MSHRKFEAPRHGSLAFHPRKRVHKVRATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ +KL K E VTIIETPPM+V G VGY KT GL+ + V+A+H+++E +RR+ K
Sbjct: 61 KRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTK 120
>gi|268323275|emb|CBH36863.1| 50S ribosomal protein L3P [uncultured archaeon]
Length = 315
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 135/288 (46%), Gaps = 41/288 (14%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSL F PRKRA R ++ ++ + F GYKAGMTHI+ S
Sbjct: 7 PRRGSLAFTPRKRA---RSEICRIKRETIVDGGNIQGFAGYKAGMTHIILTDNVSHSMTK 63
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKK 148
E VT+IETPPM V G R YK+ K+
Sbjct: 64 GMEIAIPVTVIETPPMRVEGF---------------------------RLYKSTHYGKQT 96
Query: 149 AFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNG 208
Y+ + +E KS LE +R+++ T + + G+ +KK +ME Q+ G
Sbjct: 97 VTEAYNDLSKIEELIKSNSTGLE--------LRMISSTLPKAVNGVPKKKQEVMETQM-G 147
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
G I + + YA K+I +F + + +D VTKGKG +G V RWG+T K R
Sbjct: 148 GEIGKDLKYAKEMLGKEISAKDIFNEGDFVDATAVTKGKGTQGPVKRWGITIQNAKARRS 207
Query: 269 L--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
R V IG W P RV + V + GQ GY RTE NK++ K+G+ G+E
Sbjct: 208 GKGRHVGAIGGWTPRRVRWRVPQLGQTGYQQRTEYNKRILKIGENGEE 255
>gi|126178514|ref|YP_001046479.1| 50S ribosomal protein L3P [Methanoculleus marisnigri JR1]
gi|166233158|sp|A3CSZ7.1|RL3_METMJ RecName: Full=50S ribosomal protein L3P
gi|125861308|gb|ABN56497.1| LSU ribosomal protein L3P [Methanoculleus marisnigri JR1]
Length = 337
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 146/292 (50%), Gaps = 19/292 (6%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K PR GSL + PRKRA + ++P+ P + F GYK GMTH++ +
Sbjct: 3 KINRPRRGSLAYSPRKRAKSPVPRYGSWPEYT-GAPA-VQGFAGYKVGMTHVIMVDDHKS 60
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCK 144
S K+ VT++E PPM V GV Y + G +L W L EE+ RR N K
Sbjct: 61 SPTEGKDVMVPVTVVEVPPMRVAGVRAYGEDTYGKHALTEAWTTDLDEELSRRI--NVPK 118
Query: 145 SKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEI 204
+ A + + EGK S + LA+T+ ++ G+ +K LME+
Sbjct: 119 NHDTAAALEAVKAAVGEGK-------------VSELYALAYTRPMELTGVPKKVPDLMEM 165
Query: 205 QVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 264
++ GG++ +++ YA K+I + + E +D+ VT GKG EG V RWGV RK
Sbjct: 166 RIAGGSLEDQIAYAAEILGKEITISGNLEVGEYVDVTAVTTGKGTEGPVKRWGVQVRKRK 225
Query: 265 THRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
RG +K + +G WHP V + V + GQ GY RTE NK++ K+G G E
Sbjct: 226 HSRGGKKRHIGNLGPWHPHHVRWQVPQMGQMGYQQRTEFNKRILKIGADGDE 277
>gi|407464763|ref|YP_006775645.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus sp. AR2]
gi|407047951|gb|AFS82703.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus sp. AR2]
Length = 331
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 148/290 (51%), Gaps = 23/290 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M RK PR GSL + PR RA +++A+P+ + ++ A G+KAG IV
Sbjct: 1 MGARKRHQPRRGSLAYSPRVRARSMEARIRAWPRLSATDEPKILAHCGFKAGCVQIVSID 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRF-Y 139
++ K+ T++ TPP++++G+ GY K G + V+A+ + + + +
Sbjct: 61 DRDKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGKHAEFDVYAEDIPKSIAKEITI 120
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
KN S + A +++L KIK+ ++V V + GL+ KK
Sbjct: 121 KNTAGSVENA-----------------ESRLRKIKEIYAIVAVSP-----RAAGLEMKKP 158
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
++ E V+GG I ++ + K+I ++ +F+ +D+ +TKG G++GV+ RW V
Sbjct: 159 YIFEAMVSGGDIEKQFAHVKELLGKEIKIEQIFETGATVDVAAITKGHGWQGVMRRWNVK 218
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+ K+ + +R+V +G P V +TV RAGQ G+H R E +K++ +G
Sbjct: 219 KKQHKSRKTVREVGSLGPISPQSVMYTVPRAGQTGFHQRVEYDKRIMIMG 268
>gi|398022540|ref|XP_003864432.1| ribosomal protein L3, putative, partial [Leishmania donovani]
gi|322502667|emb|CBZ37750.1| ribosomal protein L3, putative, partial [Leishmania donovani]
Length = 98
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 82/98 (83%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG 118
++PGSK++KKE E VTI+E PPM++VG+VGY +TP G
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVG 98
>gi|395756298|ref|XP_002834016.2| PREDICTED: 60S ribosomal protein L3-like, partial [Pongo abelii]
Length = 164
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 88/122 (72%)
Query: 190 KMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGY 249
K+ +QKKAH E+ + ++ +A G EKQ + + E+ID+I VTKG+G
Sbjct: 2 KLLPFRQKKAHTSEVHKSETPSQKENAWAQGRLEKQGTGHSEDSQSEVIDVIAVTKGRGV 61
Query: 250 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G
Sbjct: 62 KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIG 121
Query: 310 KG 311
+G
Sbjct: 122 RG 123
>gi|395644916|ref|ZP_10432776.1| ribosomal protein L3 [Methanofollis liminatans DSM 4140]
gi|395441656|gb|EJG06413.1| ribosomal protein L3 [Methanofollis liminatans DSM 4140]
Length = 337
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 139/288 (48%), Gaps = 23/288 (7%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFP--KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 86
PR GSL + PRKRA K +++P K +P L GYK GMTH++ + S
Sbjct: 7 PRRGSLAYSPRKRAKSQVPKYQSWPEHKGEPV----LQGIAGYKVGMTHVIMVDDHKSSP 62
Query: 87 LHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
+E VT++E P M V V YV G L VWA+ L + +R
Sbjct: 63 TEGREIMVPVTVVEVPKMRVAAVRAYVTDSYGRHPLTEVWAEELDPLLAKRV-------- 114
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
K+++ + I+ +L + S + L +TQ G+ +K LME ++
Sbjct: 115 -----TLPKEHDREAVLGEIRERLAAGQ--VSDIVALVYTQPAATTGVPKKVPELMETRI 167
Query: 207 NGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 266
+G +I D A K+I ++ + + +D+ +TKGKG +G V RWG+ RK
Sbjct: 168 DGTSIEGCFDLATSLLGKEIDPLSLVSEGQYVDVTAITKGKGTQGAVKRWGIQVRKRKHS 227
Query: 267 RGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG 312
RG +K + +G W+P V + V + GQ GY RTE NK++ K+G G
Sbjct: 228 RGGKKRHIGNLGPWNPHHVRWQVPQMGQLGYQQRTEFNKRILKVGTDG 275
>gi|198138918|gb|ACH81777.1| ribosomal protein L3 [Artemia franciscana]
Length = 194
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 68/77 (88%)
Query: 235 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNG 294
DE ID+IG TKGKGY+GV +RW +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ G
Sbjct: 1 DENIDVIGTTKGKGYKGVTSRWHTRKLPRKTHKGLRKVACIGAWHPSRVKFTVARAGQKG 60
Query: 295 YHHRTEMNKKVYKLGKG 311
YHHRTEMNKK+Y++G G
Sbjct: 61 YHHRTEMNKKIYRIGAG 77
>gi|118576052|ref|YP_875795.1| 50S ribosomal protein L3 [Cenarchaeum symbiosum A]
gi|118194573|gb|ABK77491.1| ribosomal protein L3 [Cenarchaeum symbiosum A]
Length = 328
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 23/295 (7%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRKF PR GSL + PR RA +++ +P+ +P RL A G+KAG IV
Sbjct: 1 MGHRKFSQPRRGSLAYSPRGRARSMEARIRGWPERQ-GEP-RLLAHAGFKAGCIQIVSID 58
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ + K+ T++ TPP+ V+G+ GY K G V+A+ L EV
Sbjct: 59 DREHTPNAGKQLVSLGTVLVTPPLHVLGMRGYSKGHYGRHVKFDVFAEDLPREV------ 112
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+K G+ + + + A + +L + + GL+QK+ +
Sbjct: 113 -------------AKYIVLRNGRLNAERAETMLGGTAEIYGILGVSP--RSAGLEQKRPY 157
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ E V GG++ E+ Y K + V + +D+ +TKGKG++GV+ R G R
Sbjct: 158 IFEAPVRGGSMKERFAYLKDLLGKTVKASDVLEPGAGVDVAAITKGKGWQGVIQRMGAKR 217
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQES 315
K+ + +R++ +G P V +TV RAGQ G+H R E NK++ +G G++
Sbjct: 218 KQHKSRKTVRELGSLGPISPQNVMYTVPRAGQMGFHQRIEYNKRIMAVGSAGEDD 272
>gi|431890863|gb|ELK01742.1| 60S ribosomal protein L3 [Pteropus alecto]
Length = 303
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 106/181 (58%), Gaps = 35/181 (19%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KF PR S L R AAR+ GKVK+FPKDD SK LTA LGYKAG+T+IV++V
Sbjct: 1 MSHSKFSTPRKFSASHL-RNAAARNHGKVKSFPKDDLSKTVHLTALLGYKAGVTYIVQEV 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
PGSK ++KE E VTI+ETP M++VG+
Sbjct: 60 NSPGSKENEKEVVETVTIVETPSMVIVGI------------------------------- 88
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+SKKKA T+Y K+++ ++GK+ ++ +KKY V+R++ HTQ+ + L Q+KAH
Sbjct: 89 --HRSKKKALTQYCKKWQDNDGKRQLEKGFNSMKKYCQVIRIIIHTQMHLLP-LHQEKAH 145
Query: 201 L 201
L
Sbjct: 146 L 146
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 273 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
A + AWHPA+V+F+VA AG GY RTE+N K+ K+G+G
Sbjct: 144 AHLRAWHPAQVAFSVAWAGWKGYRRRTEIN-KICKIGQG 181
>gi|324516200|gb|ADY46457.1| 60S ribosomal protein L3 [Ascaris suum]
Length = 204
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/99 (64%), Positives = 82/99 (82%), Gaps = 1/99 (1%)
Query: 173 IKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVF 232
+KKY S +RV+AHTQ++ MK ++KKAH+MEIQVNGGT+ EKVD+A EKQ+ VD+VF
Sbjct: 1 MKKYCSKIRVIAHTQMKVMKH-REKKAHIMEIQVNGGTVPEKVDWAKEHLEKQVAVDSVF 59
Query: 233 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 271
+DEMID IGVTKGKG++GV +RW +LPRKTH+GLRK
Sbjct: 60 AQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRK 98
>gi|13541155|ref|NP_110843.1| 50S ribosomal protein L3P [Thermoplasma volcanium GSS1]
gi|42559678|sp|Q97BX7.1|RL3_THEVO RecName: Full=50S ribosomal protein L3P
gi|14324543|dbj|BAB59470.1| ribosomal protein large subunit L3 [Thermoplasma volcanium GSS1]
Length = 331
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 143/286 (50%), Gaps = 28/286 (9%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 87
H R GS+ + PR RA +++++P + S P ++ F G+K GMTH+ + S
Sbjct: 6 HSRRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVT 63
Query: 88 HKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
+ VT+IE PP+ V+G+ Y + G + + W Q+L +E+
Sbjct: 64 AGQPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVYEKWTQNLDKEL------------ 111
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
F K + E E + + + + VR++ T+ + + G+ KK + E+++
Sbjct: 112 ---FKKITTFKEVKE---------KPVPETYADVRLIVATRNKDVPGIPSKKPEIFELRI 159
Query: 207 NGG-TIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
GG ++ E+ +YA K I + + + +D++ VTKGKG+ G V R+GV LPRK
Sbjct: 160 GGGNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQRFGVKLLPRKN 219
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+ R + +G WHP V TV +AGQ GY RT N +V K KG
Sbjct: 220 RKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSKG 265
>gi|385805567|ref|YP_005841965.1| 50S ribosomal protein L3P [Fervidicoccus fontis Kam940]
gi|383795430|gb|AFH42513.1| 50S ribosomal protein L3P [Fervidicoccus fontis Kam940]
Length = 347
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 146/287 (50%), Gaps = 18/287 (6%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HRK PR G+LG PR+R +V+ +P + K L F+GYK GMTH +
Sbjct: 1 MGHRKKSAPRRGTLGVRPRQRFEGIVPRVRTWPVLEEKKIFPL-GFIGYKVGMTHALVVD 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGY-VKTPRGLRSLNTVWAQHLSEEVRRRFY 139
++ S K+ VT++ETPPM++ G+ GY G + L WA + ++
Sbjct: 60 DRKTSITFGKQIFTPVTLLETPPMILAGIRGYSFDINEGKQPLTEAWAT--GDTLKNTNI 117
Query: 140 KNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
+ KS F+ S Q + +E +KS+ E +R L +Q G+ +KK
Sbjct: 118 ERLIKS----FSPNSTQQKLEELEKSLSEMAE--------LRALLLSQPTLAGGISKKKP 165
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
L+E+ ++G + + YA K I + +F + +DII VTKGKG++G V R+G+
Sbjct: 166 ELIEVGLSGKDLKAQFSYAVEKLGKTIKISEIFNPGKFVDIIAVTKGKGFQGPVKRFGIK 225
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVA-RAGQNGYHHRTEMNKKV 305
LPR H+ + IGA P + + A +AGQ G+H R + NK++
Sbjct: 226 VLPR-WHKHRKAARKIGARGPGMGALSTAPQAGQMGFHQRVDYNKRI 271
>gi|224105031|ref|XP_002333867.1| predicted protein [Populus trichocarpa]
gi|222838758|gb|EEE77109.1| predicted protein [Populus trichocarpa]
Length = 152
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/66 (89%), Positives = 63/66 (95%)
Query: 258 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHT 317
VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGK GQESH
Sbjct: 1 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKCGQESHC 60
Query: 318 GITEFD 323
+TE+D
Sbjct: 61 AVTEYD 66
>gi|432111882|gb|ELK34924.1| 60S ribosomal protein L3 [Myotis davidii]
Length = 231
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 88/135 (65%), Gaps = 31/135 (22%)
Query: 177 ASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDE 236
V+RV+AHTQ+R + L QKK HLMEIQ DE
Sbjct: 15 CQVIRVIAHTQMRLLP-LHQKKVHLMEIQ-----------------------------DE 44
Query: 237 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 296
MID+IGVTKGKGY+GV +RW +LP KTHRG +KVACI AWHPA+V+F+VA+AGQ GYH
Sbjct: 45 MIDLIGVTKGKGYKGVTSRWHTKKLPHKTHRGPQKVACIQAWHPAQVAFSVAQAGQKGYH 104
Query: 297 HRTEMNKKVYKLGKG 311
TE+N K+Y++G+G
Sbjct: 105 PHTEIN-KIYRIGQG 118
>gi|110456408|gb|ABG74707.1| putative ribosomal protein L3e, partial [Diaphorina citri]
Length = 201
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 67/75 (89%)
Query: 237 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 296
MID IGVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYH
Sbjct: 1 MIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYH 60
Query: 297 HRTEMNKKVYKLGKG 311
HRTE+NKK+Y++G G
Sbjct: 61 HRTELNKKIYRMGAG 75
>gi|239789793|dbj|BAH71497.1| ACYPI009439 [Acyrthosiphon pisum]
Length = 193
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 67/75 (89%)
Query: 237 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 296
MID IGVTKG+GY+GV +RW +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYH
Sbjct: 1 MIDCIGVTKGRGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYH 60
Query: 297 HRTEMNKKVYKLGKG 311
HRTE+NKK+Y++G G
Sbjct: 61 HRTEINKKIYRIGLG 75
>gi|374724264|gb|EHR76344.1| Ribosomal protein L3 [uncultured marine group II euryarchaeote]
Length = 336
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 22/286 (7%)
Query: 25 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 84
K HPR GS+ F PRKRA R G VK++P D S+ R+ F G+KAGMTH++ P
Sbjct: 3 KKSHPRRGSMAFSPRKRANRPFGHVKSWPTTDASE-VRMQGFAGWKAGMTHVLSRDLNPR 61
Query: 85 SKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQH--LSEEVRRRFYKNW 142
S +E VT++E P M ++GV GY TP G ++ WA ++E F +
Sbjct: 62 SPSAGQEVRIPVTVVECPKMRILGVRGYAMTPYGKQAAGEAWADAAKIAEAFEDLFKRLP 121
Query: 143 CKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLM 202
+ + A K +E + A L + VR++ TQ + G+ K +M
Sbjct: 122 VRKEHDA----EKHFEN-----LMNADLVE-------VRLICATQPHSVSGIPTKVPSVM 165
Query: 203 EIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 262
E+ ++GG I ++++YA EK + + DI+ +TKG G++GV+ R+G
Sbjct: 166 EVGLDGGNIGDQLNYAK---EKLGEEYSXXXXXXLTDIVAITKGYGWQGVIKRFGGKLQS 222
Query: 263 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
K + R+ +GA+ V ++ + GQ GYH RTE NK++ ++
Sbjct: 223 HKNSKKRRQHGNMGAFGDGYVRKSIRQGGQTGYHQRTEYNKRIMRI 268
>gi|414587229|tpg|DAA37800.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
Length = 78
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 64/67 (95%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKL 87
EKPGS +
Sbjct: 61 EKPGSSM 67
>gi|395502503|ref|XP_003755619.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
[Sarcophilus harrisii]
Length = 358
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 154/291 (52%), Gaps = 43/291 (14%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MS+ KF P+HG FLP+K + KDD K LT F+GYK +T I R+V
Sbjct: 1 MSYWKFFTPKHG---FLPQKIELK--------VKDDHIKLIHLTDFMGYKTDITXITREV 49
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++ SK++KKE VTI+E M+++ T++A+ + K
Sbjct: 50 DRMDSKVNKKEVVWMVTIVEMSLMIII----------------TIFAELM--------MK 85
Query: 141 NWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW KSK+K Y K +E D KK ++ IKKY V+ + AHTQ+ + L+QKK
Sbjct: 86 NWHKSKEKXCKYYKKWWEVD-SKKXLKKNFNNIKKYCQVIXLAAHTQMLLLP-LRQKKPE 143
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+M+IQV + +K+++ +Q+P VF +D+M DI VTK GY+ V + +
Sbjct: 144 IMKIQV---XVTDKLEWTCEXMGQQVP---VFGQDKMTDISEVTKINGYKDVASCCHTKK 197
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
L KT +GL K+ C F++A+AGQ G + + +NKK++K+G G
Sbjct: 198 LSEKTLQGLHKLICTDFDTVTIXVFSLAQAGQMGCSYXSNINKKIHKIGXG 248
>gi|294919384|ref|XP_002778527.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239887018|gb|EER10322.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 65/79 (82%)
Query: 237 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 296
M+DIIGVTKG G V TRWGVTRL RKTHRGLRKVACIGAWHPARV F V RAGQ GYH
Sbjct: 1 MVDIIGVTKGHGNTSVTTRWGVTRLARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYH 60
Query: 297 HRTEMNKKVYKLGKGGQES 315
HR E+NKK+Y++GK +E
Sbjct: 61 HRVEINKKIYRIGKALRED 79
>gi|424812829|ref|ZP_18238069.1| ribosomal protein L3 [Candidatus Nanosalinarum sp. J07AB56]
gi|339757051|gb|EGQ40634.1| ribosomal protein L3 [Candidatus Nanosalinarum sp. J07AB56]
Length = 323
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 130/290 (44%), Gaps = 41/290 (14%)
Query: 29 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 88
PR GSLG+ P+ RA R + +P+ P F YKAGMT ++ V+
Sbjct: 7 PRSGSLGYKPKVRADRVYPDIDNWPEAGEPTPLD---FPAYKAGMTRVLH-VDDTEGATQ 62
Query: 89 KKETCEAVTIIETPPMMVVGVVGYVKTPR-GLRSLNTVWAQHLSEEVRRRFYKNWCKSKK 147
+E VT++E PP V G Y P G + + W + S E++R
Sbjct: 63 GQEVATPVTVLEAPPARVYGARFYTYDPNHGKQVMTEAWTESPSPELQRA---------- 112
Query: 148 KAFTKYSKQYETDEGKKSIQAQLEKIKKYA---SVVRVLAHTQIRKMKGLKQKKAHLMEI 204
TD K +E+ K+ VR+L HTQ Q H +
Sbjct: 113 -----------TDIPKNGNLDNIEEAKEETGEIDEVRLLVHTQ-------PQMTGHGHPV 154
Query: 205 QVN-----GGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
N GG ++++ A QI V + + D + VTKGKG EG V R GVT
Sbjct: 155 PANFETGLGGDTEQQLEAAENLIGTQISPQDVLDEGQYTDAVAVTKGKGMEGPVKRHGVT 214
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+L KT + RK +G WHP +S+ + GQ G+H+RTE+NK+++ +G
Sbjct: 215 KLGHKTQKKRRKAGNVGPWHPDTLSWKIPLPGQEGFHNRTEINKRIFDIG 264
>gi|374633068|ref|ZP_09705435.1| archaeal ribosomal protein L3 [Metallosphaera yellowstonensis MK1]
gi|373524552|gb|EHP69429.1| archaeal ribosomal protein L3 [Metallosphaera yellowstonensis MK1]
Length = 299
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 133/251 (52%), Gaps = 26/251 (10%)
Query: 65 AFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRS-LN 123
F+GYK GMTH+ E S + KE VT++ETPP+ V+ + Y +G S +
Sbjct: 2 GFVGYKVGMTHVFMVDENKSSSTYGKEIYVPVTVLETPPLNVLAIRAYGLDSKGEHSVIA 61
Query: 124 TVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIK---KYASVV 180
W S+ N+ + + K K S + + LEKIK + S +
Sbjct: 62 EAWGDLGSQ-------LNYIQRRIKTL-KLSNE--------KLAPALEKIKSSIESVSFL 105
Query: 181 RVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDI 240
R+L TQ + L +K ++E+Q+ GG + ++ YA K + V VF++ +++DI
Sbjct: 106 RLLISTQPYLIPSLGKKTPDIVEVQIGGGDLKSQLQYAEKILGKTLSVTDVFKEGQLVDI 165
Query: 241 IGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHH 297
IGVTKG G++GV+ R+GV LPR K +G RKV G P+ + + V + GQ GYH
Sbjct: 166 IGVTKGHGFQGVIKRYGVQELPRWHKHRKGSRKVGTKG---PSLGTPSYVPQPGQTGYHR 222
Query: 298 RTEMNKKVYKL 308
RTE NK+++K+
Sbjct: 223 RTEYNKRIFKI 233
>gi|297832722|ref|XP_002884243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330083|gb|EFH60502.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 78
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/76 (78%), Positives = 67/76 (88%), Gaps = 3/76 (3%)
Query: 66 FLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLRSLNTV 125
FLGYKAGMTHIVR+V KPGS+ HK+ETCEAVT+IETPPM+ VVGYVK P GL + +TV
Sbjct: 6 FLGYKAGMTHIVREVVKPGSQHHKEETCEAVTMIETPPMV---VVGYVKIPDGLSTRSTV 62
Query: 126 WAQHLSEEVRRRFYKN 141
WAQHLSEEVRRRFYKN
Sbjct: 63 WAQHLSEEVRRRFYKN 78
>gi|193083866|gb|ACF09547.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 350
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 150/295 (50%), Gaps = 32/295 (10%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+G+ PRKRA R ++ ++P+ D S+ R+ F G+KAGMTHI+ P L + +
Sbjct: 1 MGYSPRKRAVRQFPRISSWPESDASE-VRVQGFAGWKAGMTHILLRDTNPPLYLSQAGSQ 59
Query: 94 EAV-TIIETPPMMVVGVVGYVKTPR-GLRSLNTVW---AQHLSEEVRRRFYKNWCKSKKK 148
E + E M V G + R GL++ VW +Q E + RF N + ++
Sbjct: 60 EGGHSRFEASRMSVRLGSGSSRLARYGLQTAGEVWTDISQGGPENLVPRF-ANQTRGER- 117
Query: 149 AFTKYSKQYETDEGKK--------------SIQAQLEKIK-KYASVVRVLAHTQIRKMKG 193
+ +EG+K S +A +E ++ + S VR++ TQ +
Sbjct: 118 ---------DIEEGRKPAKRGGRIPSRSNGSQEASIESLRGQDLSEVRLIVSTQPNMVGS 168
Query: 194 LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVV 253
+ K +ME+ + GG K+D+A QI +D V+Q + +D++GVTKGKG++G +
Sbjct: 169 IPSKTPEIMEVDLVGGDTEAKLDWAMERLGGQIGLDDVYQAGQEVDVVGVTKGKGWQGSI 228
Query: 254 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
R+G+ L K + R+ +G + V T+ +AGQ GYH RTE+NK++ ++
Sbjct: 229 KRFGLKLLTHKNSKRRRQGGNMGDFGTGYVRKTIRQAGQVGYHKRTELNKRILRI 283
>gi|84998982|ref|XP_954212.1| 60S ribosomal protein l3 [Theileria annulata]
gi|65305210|emb|CAI73535.1| 60S ribosomal protein l3, putative [Theileria annulata]
Length = 173
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Query: 237 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 296
M+D++GVTKG G +GVV+R+GVTRLPRKTHRGLRKVACIG+WHPARV F V R GQ GYH
Sbjct: 1 MLDVLGVTKGHGVKGVVSRYGVTRLPRKTHRGLRKVACIGSWHPARVQFQVPRHGQKGYH 60
Query: 297 HRTEMNKKVYKLGKGGQESHTGITEFD 323
RTE NKK+Y++G G + G T+ D
Sbjct: 61 KRTERNKKIYRIGL-GNCNRNGSTDSD 86
>gi|291391876|ref|XP_002712286.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 188
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 64/75 (85%)
Query: 237 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 296
MI++ GVTKGKGY+GV +RW +LPRKTHRGL KVACIGAWH AR +F+VA A Q GYH
Sbjct: 1 MINVTGVTKGKGYKGVTSRWHTKKLPRKTHRGLPKVACIGAWHLARKAFSVAWARQKGYH 60
Query: 297 HRTEMNKKVYKLGKG 311
HRTE+NKK+YK+G+G
Sbjct: 61 HRTEINKKIYKIGQG 75
>gi|8572163|gb|AAF77033.1|AF247852_1 ribosomal protein L3 [Caenorhabditis remanei]
Length = 91
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 70/86 (81%)
Query: 107 VGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSI 166
GV GY+ TP+G R+L T+WA+HLSEE RRRFY NW KSKKKAFTKY+K+++ ++GKK I
Sbjct: 1 AGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLI 60
Query: 167 QAQLEKIKKYASVVRVLAHTQIRKMK 192
+A K+KKY S +RV+AHTQ++ ++
Sbjct: 61 EADFAKLKKYCSSIRVIAHTQMKILR 86
>gi|309266996|ref|XP_001476854.2| PREDICTED: 60S ribosomal protein L3-like, partial [Mus musculus]
Length = 180
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 61/67 (91%)
Query: 245 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK 304
KGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYH+RTE+NKK
Sbjct: 1 KGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHYRTEINKK 60
Query: 305 VYKLGKG 311
+YK+ +G
Sbjct: 61 IYKICQG 67
>gi|226475920|emb|CAX72050.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 202
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 63/74 (85%)
Query: 240 IIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT 299
I VTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRT
Sbjct: 2 FIDVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRT 61
Query: 300 EMNKKVYKLGKGGQ 313
E+NKK+Y++G G Q
Sbjct: 62 ELNKKIYRIGMGLQ 75
>gi|70909597|emb|CAJ17224.1| ribosomal protein L3e [Micromalthus debilis]
Length = 178
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 59/65 (90%)
Query: 247 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVY 306
KGY+GV +RW +LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTE+NKK+Y
Sbjct: 1 KGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEVNKKIY 60
Query: 307 KLGKG 311
++G G
Sbjct: 61 RIGAG 65
>gi|16082270|ref|NP_394728.1| 50S ribosomal protein L3P [Thermoplasma acidophilum DSM 1728]
gi|42559694|sp|Q9HIQ9.1|RL3_THEAC RecName: Full=50S ribosomal protein L3P
gi|10640617|emb|CAC12395.1| 50S ribosomal protein L3 related protein [Thermoplasma acidophilum]
Length = 331
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 140/284 (49%), Gaps = 28/284 (9%)
Query: 28 HPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 87
H R GS+ + PR RA K++++P + ++ F G+K GMTH+ + S
Sbjct: 6 HSRRGSMAYYPRVRAKSVDPKIRSWP--EIKGEVKVQGFAGFKVGMTHVEMIDYRKKSVT 63
Query: 88 HKKETCEAVTIIETPPMMVVGVVGYVKTPRG-LRSLNTVWAQHLSEEVRRRFYKNWCKSK 146
+ VT++E PP+ VVG Y + G L + WA+ L +E+ R+ + K
Sbjct: 64 AGQPILVPVTVVEVPPLDVVGYRLYDEDAEGNLVVVFEAWAKDLDKEIFRKI----PEIK 119
Query: 147 KKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQV 206
K A + YE VR++ T+ + + G+ KK + E+++
Sbjct: 120 KVAERDPPESYED--------------------VRIIVATRNKDVPGIPSKKPEIFELRI 159
Query: 207 NGG-TIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 265
GG ++ E+++YA KQI + + +D++ +TKGKG+ G V R+GV LPRK
Sbjct: 160 GGGNSVKERLEYAKNHLGKQITFTDFSKPGKFVDVVSITKGKGFTGHVKRFGVKLLPRKN 219
Query: 266 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+ R + +G WHP V TV +AGQ G+ RT N +V K G
Sbjct: 220 RKHRRMIGTLGPWHPDWVRNTVPQAGQMGFQQRTISNVRVIKYG 263
>gi|257076559|ref|ZP_05570920.1| 50S ribosomal protein L3P [Ferroplasma acidarmanus fer1]
Length = 319
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 140/274 (51%), Gaps = 25/274 (9%)
Query: 34 LGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 93
+ + PR RA + +++++P+ + ++ AF GYK GMTHI + S K
Sbjct: 1 MAYYPRVRAKKIGAEIRSWPEIEGK--SKIQAFAGYKVGMTHIQVTDYRKTSVTAGKTIM 58
Query: 94 EAVTIIETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKY 153
VT++E PP+ V+ + Y GL+ V+A+ +E++ + +K + K K
Sbjct: 59 VPVTVVEVPPINVIAIRYYEDGDNGLQ----VFAEKRAEQIEKEVFKRIPEIKNKE---- 110
Query: 154 SKQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAE 213
K+I+ IK A V R+L +T + + G+ K + E++++G TIA+
Sbjct: 111 ---------PKNIE-----IKDVADV-RLLVNTNPQLVTGIPTKTPEIFEVRISGSTIAD 155
Query: 214 KVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 273
++ A K++ D +D+I VTKGKG++GVV R+GV LPR + R +
Sbjct: 156 RIKLAEEKLGKELHFDDFNSTGSFVDVISVTKGKGFQGVVKRFGVKLLPRSNRKHRRMIG 215
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYK 307
+G WHP V TV +AGQ G H RT N ++ K
Sbjct: 216 TLGPWHPDWVRNTVPQAGQVGLHQRTIHNIRIMK 249
>gi|380481419|emb|CCF41852.1| 60S ribosomal protein L3, partial [Colletotrichum higginsianum]
Length = 83
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 62/72 (86%)
Query: 32 GSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 91
GSL +LPRKRAARHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+++PG+K +KKE
Sbjct: 12 GSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKANKKE 71
Query: 92 TCEAVTIIETPP 103
EAV+II+TPP
Sbjct: 72 VVEAVSIIDTPP 83
>gi|67594773|ref|XP_665876.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656732|gb|EAL35645.1| hypothetical protein Chro.50226 [Cryptosporidium hominis]
Length = 74
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/65 (81%), Positives = 58/65 (89%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PR GSLGFLPRKR +R RGKVKAFPKDD ++P LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFERPRSGSLGFLPRKRCSRSRGKVKAFPKDDSNQPPHLTAFMGYKAGMTHIVRDV 60
Query: 81 EKPGS 85
+KPGS
Sbjct: 61 DKPGS 65
>gi|390370692|ref|XP_003731872.1| PREDICTED: 60S ribosomal protein L3-like, partial
[Strongylocentrotus purpuratus]
Length = 64
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 56/64 (87%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR+ RHRGK KAFPKDD SKP LT FLGYKAGMTHIVRDV+
Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSRRHRGKAKAFPKDDKSKPVHLTCFLGYKAGMTHIVRDVD 60
Query: 82 KPGS 85
+PGS
Sbjct: 61 RPGS 64
>gi|452210662|ref|YP_007490776.1| LSU ribosomal protein L3e (L3p) [Methanosarcina mazei Tuc01]
gi|452100564|gb|AGF97504.1| LSU ribosomal protein L3e (L3p) [Methanosarcina mazei Tuc01]
Length = 283
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 99 IETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYE 158
IETP + V V Y + G +++ WA L E++RR ++ + K E
Sbjct: 21 IETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRRIPIPAAGNQAEGLENIGKLIE 80
Query: 159 TDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYA 218
EG+ S +R + +T + + G+ +K +ME ++ + K +YA
Sbjct: 81 --EGR-------------VSDIRAVTYTLPKSLTGVPKKVPDIMESGISAKDLGAKFEYA 125
Query: 219 YGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR---GLRKVACI 275
+ V VF+ ++D +T GKG +G V RWG+ +L + H LR++ +
Sbjct: 126 KSILGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGI-QLQKGKHSRQGSLRQIGTL 184
Query: 276 GAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
G+++P+RVS+ V + GQ GYH RTE NK++ K+G G+E
Sbjct: 185 GSFNPSRVSWRVPQMGQTGYHQRTEFNKRILKIGSDGEE 223
>gi|119630150|gb|EAX09745.1| hCG1794419, isoform CRA_a [Homo sapiens]
Length = 188
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 59/75 (78%)
Query: 237 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 296
MIDIIGVTKGKGY+GV + W +LP KTHRGL KVA IGAWHP V+F++A AGQ G H
Sbjct: 1 MIDIIGVTKGKGYKGVTSCWHTKKLPHKTHRGLCKVAWIGAWHPDHVAFSMACAGQKGDH 60
Query: 297 HRTEMNKKVYKLGKG 311
H TE+NKK+ K+ +G
Sbjct: 61 HHTEINKKICKIDQG 75
>gi|255513436|gb|EET89702.1| ribosomal protein L3 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 322
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 126/270 (46%), Gaps = 32/270 (11%)
Query: 56 DPSK-PCRLTAFLGYKAGMTHI--VRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGY 112
+P K P L+ + +KAGMT + + D E P + E TI+E P G+ Y
Sbjct: 25 NPEKDPVSLSNIVAFKAGMTSLSYIDDSESPSKGM---EVLRGCTILEVPKTEAYGIRLY 81
Query: 113 VKTP--RGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKS-IQAQ 169
P + L+ ++ + ++ ++ K+ +TDE K S + +
Sbjct: 82 SVDPTTKYLKCTAEIYNKAIANKIG------------------IKEIKTDESKISKFKER 123
Query: 170 LEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVD 229
L K+ V ++AH + Q E V GG ++ D+A K++
Sbjct: 124 LSDFKRIG--VLLVAHADTISAE---QNHPTKYESTVTGGNAEQRFDFAAQLVGKEVKPA 178
Query: 230 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 289
VF+ E ID++ VTKGKG+ GV+ R GV RL K + +R + +GA+ P ++ +TV R
Sbjct: 179 DVFKGGEFIDVVSVTKGKGWAGVIKRHGVRRLDHKATQKIRHIGALGAFTPGKIMYTVPR 238
Query: 290 AGQNGYHHRTEMNKKVYKLGKGGQESHTGI 319
GQ G+++RTE NK++ LG I
Sbjct: 239 PGQLGFNYRTEHNKRILVLGAASDTEKVNI 268
>gi|159145604|gb|ABW90339.1| putative ribosomal protein L3 [Sipunculus nudus]
Length = 59
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 51/59 (86%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD 79
MSHR F PRHGSLGFLP+KR+ RHRG+VKAFPKDD SKP LTAFL YKAGMTH+VR+
Sbjct: 1 MSHRTFSAPRHGSLGFLPKKRSKRHRGEVKAFPKDDASKPVHLTAFLTYKAGMTHVVRE 59
>gi|269986342|gb|EEZ92643.1| ribosomal protein L3 [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 301
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 121/277 (43%), Gaps = 36/277 (12%)
Query: 40 KRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTII 99
KR GKV+ K++ + F GYK GM + S K E T++
Sbjct: 10 KRPYNTFGKVENLEKNE------IGGFAGYKVGMIQLSYIDSDKNSPTFKMEVITNATVL 63
Query: 100 ETPPMMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYET 159
E+PP+ V + Y K S+ W +++ V R Q +
Sbjct: 64 ESPPLFVCALRFYNKG----SSIGESWGSGINKFVAR-------------------QVKF 100
Query: 160 DEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAY 219
E KS+ + K +R++ TQ K+ +KK + E+ + GG + +K+
Sbjct: 101 KENNKSV----DDFKGKFDDIRLIVSTQPWKID--LKKKPEVFELCI-GGNLEDKLTLGK 153
Query: 220 GFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 279
K+I +V + +D+ VTKGKG+ G V R+GV P + RK +GA
Sbjct: 154 ELLSKEIEASSVIKDGNFVDVASVTKGKGFTGSVKRYGVKIYPVHASKSRRKAGNLGAES 213
Query: 280 PARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESH 316
A+V FTV + G+ G++ R E NK V+++ K E +
Sbjct: 214 MAKVQFTVPQHGRLGFNSRVEYNKFVFRVIKDADEVN 250
>gi|149498722|ref|XP_001519230.1| PREDICTED: 60S ribosomal protein L3-like, partial [Ornithorhynchus
anatinus]
Length = 62
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 49/56 (87%)
Query: 194 LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGY 249
L+QKK+HLMEIQVNGG+IAEKVD+A E+Q+PV VF +DEMID+IGVTKGKGY
Sbjct: 6 LRQKKSHLMEIQVNGGSIAEKVDWAREKLEQQVPVATVFGQDEMIDVIGVTKGKGY 61
>gi|359417496|ref|ZP_09209636.1| 50S ribosomal protein L3P, partial [Candidatus Haloredivivus sp.
G17]
gi|358032145|gb|EHK00909.1| 50S ribosomal protein L3P [Candidatus Haloredivivus sp. G17]
Length = 328
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%)
Query: 224 KQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 283
K+I VF+ E D++ VTKGKG EG V R+G+ +L KT + RK +G WHP ++
Sbjct: 97 KEIEFSDVFEVGEYSDVVAVTKGKGVEGPVQRYGIKKLSHKTQKKRRKAGNVGPWHPDQL 156
Query: 284 SFTVARAGQNGYHHRTEMNKKVYKLGKGGQE 314
S+ + GQ G+++RTE+NK++ G+ +E
Sbjct: 157 SWRIPLPGQQGFNNRTEINKRILDFGEDPEE 187
>gi|377824634|gb|AFB77873.1| 60S ribosomal protein L3, partial [Discoglossus montalentii]
gi|377824636|gb|AFB77874.1| 60S ribosomal protein L3, partial [Discoglossus montalentii]
gi|377824638|gb|AFB77875.1| 60S ribosomal protein L3, partial [Discoglossus montalentii]
gi|377824652|gb|AFB77882.1| 60S ribosomal protein L3, partial [Discoglossus pictus]
gi|377824654|gb|AFB77883.1| 60S ribosomal protein L3, partial [Discoglossus pictus]
gi|377824656|gb|AFB77884.1| 60S ribosomal protein L3, partial [Discoglossus jeanneae]
gi|377824658|gb|AFB77885.1| 60S ribosomal protein L3, partial [Discoglossus jeanneae]
gi|377824660|gb|AFB77886.1| 60S ribosomal protein L3, partial [Discoglossus scovazzi]
gi|377824662|gb|AFB77887.1| 60S ribosomal protein L3, partial [Discoglossus galganoi galganoi]
gi|377824664|gb|AFB77888.1| 60S ribosomal protein L3, partial [Discoglossus galganoi galganoi]
gi|377824666|gb|AFB77889.1| 60S ribosomal protein L3, partial [Discoglossus galganoi galganoi]
Length = 54
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGY 249
KK+HLMEIQVNGGTIAEKVD+A E+Q+ + VF +DEMID+IGVTKGKGY
Sbjct: 1 KKSHLMEIQVNGGTIAEKVDWAREKLEQQVAISGVFGQDEMIDVIGVTKGKGY 53
>gi|377824640|gb|AFB77876.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
gi|377824642|gb|AFB77877.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
gi|377824644|gb|AFB77878.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
gi|377824646|gb|AFB77879.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
gi|377824648|gb|AFB77880.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
gi|377824650|gb|AFB77881.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
Length = 54
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGY 249
KK+HLMEIQVNGGTIAEKVD+A E+Q+ + VF +DEMID+IGVTKGKGY
Sbjct: 1 KKSHLMEIQVNGGTIAEKVDWAREKLEQQVAIGGVFGQDEMIDVIGVTKGKGY 53
>gi|377824668|gb|AFB77890.1| 60S ribosomal protein L3, partial [Alytes obstetricans]
Length = 54
Score = 80.9 bits (198), Expect = 8e-13, Method: Composition-based stats.
Identities = 38/54 (70%), Positives = 47/54 (87%)
Query: 197 KKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYE 250
KK+HLMEIQVNGGTIAEKVD+A E+Q+ ++ VF +DEMID+IGVTKGKGY+
Sbjct: 1 KKSHLMEIQVNGGTIAEKVDWACEKLEQQVAINGVFGQDEMIDVIGVTKGKGYK 54
>gi|167043662|gb|ABZ08355.1| hypothetical protein ALOHA_HF4000APKG2O16ctg10g1, partial
[uncultured marine crenarchaeote HF4000_APKG2O16]
Length = 106
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
M HR+ PR GSL +LPR RA +++A+PK + +P +L A G+KAG IV
Sbjct: 1 MGHRRHSAPRRGSLAYLPRGRAKSMEARIRAWPKVNSDEP-KLLAHAGFKAGCVQIVNID 59
Query: 81 EKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRG 118
++ + H K+ T+I TPP+++ G+ GY K P G
Sbjct: 60 DREKTPNHGKQLVSLGTVIVTPPILIAGIRGYSKDPDG 97
>gi|68011480|ref|XP_671157.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487082|emb|CAH93715.1| hypothetical protein PB000142.00.0 [Plasmodium berghei]
Length = 139
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 274 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG----KGGQESHTGITE 321
CIGAWHPARV F V R GQ GY HRTE NKK+Y++G K + ITE
Sbjct: 1 CIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIGLKKDKNNASTDADITE 52
>gi|285025766|gb|ADC33744.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025768|gb|ADC33745.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025770|gb|ADC33746.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025772|gb|ADC33747.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025774|gb|ADC33748.1| ribosomal protein L3 [Pelodytes ibericus]
gi|285025776|gb|ADC33749.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025778|gb|ADC33750.1| ribosomal protein L3 [Pelodytes ibericus]
gi|285025780|gb|ADC33751.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025782|gb|ADC33752.1| ribosomal protein L3 [Pelodytes punctatus]
Length = 45
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 206 VNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYE 250
VNGGTI+EKVD+A E+Q+ V+ VF +DEMID+IGVTKGKGY+
Sbjct: 1 VNGGTISEKVDWAREKLEQQVAVNGVFGQDEMIDVIGVTKGKGYK 45
>gi|404486839|ref|ZP_11022027.1| 50S ribosomal protein L3 [Barnesiella intestinihominis YIT 11860]
gi|404335893|gb|EJZ62359.1| 50S ribosomal protein L3 [Barnesiella intestinihominis YIT 11860]
Length = 204
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 226 IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPA 281
I VD +F+ E +D+IGV+KGKG++GVV R G + + T H LR IGA +PA
Sbjct: 94 IAVD-LFEGAEYVDVIGVSKGKGFQGVVKRHGFGGVGQTTHGQHNRLRAPGSIGACSYPA 152
Query: 282 RVSFTVARAGQNGYHHRTEMNKKVYKL 308
RV AGQ G H T N +V K+
Sbjct: 153 RVFKGTRMAGQMGNHRVTVQNLQVLKV 179
>gi|365121785|ref|ZP_09338699.1| 50S ribosomal protein L3 [Tannerella sp. 6_1_58FAA_CT1]
gi|363644386|gb|EHL83673.1| 50S ribosomal protein L3 [Tannerella sp. 6_1_58FAA_CT1]
Length = 205
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 226 IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPA 281
I +D +F +D+ +D++G +KGKGY+GVV R G + + T H LR IGA +PA
Sbjct: 95 ISID-LFAEDDFVDVVGTSKGKGYQGVVKRHGFGGVGQTTHGQHNRLRAPGSIGACSYPA 153
Query: 282 RVSFTVARAGQNGYHHRTEMNKKVYKL 308
RV AGQ G T N +V K+
Sbjct: 154 RVFKGTRMAGQTGNERVTVQNLQVLKV 180
>gi|119602067|gb|EAW81661.1| hCG22885, isoform CRA_b [Homo sapiens]
Length = 169
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 261 LPRKTHRG-LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPR+ G + + H A + F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 6 LPRQEAEGPMSGSGELSVRHHA-IKFSVARAGQKGYHHRTEINKKIYKIGQG 56
>gi|294893394|ref|XP_002774450.1| hypothetical protein Pmar_PMAR006031 [Perkinsus marinus ATCC
50983]
gi|239879843|gb|EER06266.1| hypothetical protein Pmar_PMAR006031 [Perkinsus marinus ATCC
50983]
Length = 54
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 27/31 (87%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKA 51
MSHRKFE PRHGSLGFLPRKR H+GKVK+
Sbjct: 1 MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKS 31
>gi|298373698|ref|ZP_06983687.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058]
gi|298274750|gb|EFI16302.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058]
Length = 206
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 226 IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH----RGLRKVACIGA-WHP 280
+ DAVF++++ +D++G++KGKG++GVV R G + ++TH RG R +GA +P
Sbjct: 95 VTADAVFEENDFVDVVGISKGKGFQGVVKRHGFGGVGQQTHGQHNRG-RAPGSMGASSYP 153
Query: 281 ARVSFTVARAGQNGYHHRTEMNKKVYKL 308
++V + AG+ G T N +V K+
Sbjct: 154 SKVVKGMRMAGRTGGDRVTIQNLQVVKI 181
>gi|294507051|ref|YP_003571109.1| 50S ribosomal protein L3 [Salinibacter ruber M8]
gi|294343379|emb|CBH24157.1| 50S ribosomal protein L3 [Salinibacter ruber M8]
Length = 208
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 226 IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH---RGLRKVACIGA-WHPA 281
+ V+ +FQ+DE ID++GV+KGKG++GVV R G + + TH R IGA P+
Sbjct: 96 VRVEDLFQEDERIDVVGVSKGKGFQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPS 155
Query: 282 RVSFTVARAGQNGYHHRTEMNKKVYKL 308
RV V AGQ G N +V ++
Sbjct: 156 RVFKGVRMAGQTGGERTKIQNLRVVRI 182
>gi|340621220|ref|YP_004739671.1| 50S ribosomal protein L3 [Capnocytophaga canimorsus Cc5]
gi|339901485|gb|AEK22564.1| 50S ribosomal protein L3 [Capnocytophaga canimorsus Cc5]
Length = 205
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 195 KQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPV-DAV----FQKDEMIDIIGVTKGKGY 249
+ KA L + G ++ +KV GF EK+ + DA+ F + E +DI G++KGKG+
Sbjct: 59 RANKAELGHFKKAGSSVKKKVVEFQGF-EKEYKIGDAISVELFSEGEFVDITGISKGKGF 117
Query: 250 EGVVTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKV 305
+GVV R G + + T H LR IGA +P+RV + AG+ G T N KV
Sbjct: 118 QGVVKRHGFGGVGQSTHGQHNRLRAPGSIGASSYPSRVFKGMRMAGRMGAEKVTVQNLKV 177
Query: 306 YKL 308
K+
Sbjct: 178 LKV 180
>gi|119602066|gb|EAW81660.1| hCG22885, isoform CRA_a [Homo sapiens]
Length = 97
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/29 (72%), Positives = 27/29 (93%)
Query: 283 VSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+ F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 28 IKFSVARAGQKGYHHRTEINKKIYKIGQG 56
>gi|449708198|gb|EMD47703.1| 60S ribosomal protein L3, partial [Entamoeba histolytica KU27]
Length = 56
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 104 MMVVGVVGYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYE 158
M+V G VGY KT GL+ + V+A+H+++E +RR+ K W K+ K F ++++Y
Sbjct: 1 MVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTKKWYKNTKNQFAVHTEKYN 55
>gi|297801894|ref|XP_002868831.1| hypothetical protein ARALYDRAFT_912259 [Arabidopsis lyrata subsp.
lyrata]
gi|297314667|gb|EFH45090.1| hypothetical protein ARALYDRAFT_912259 [Arabidopsis lyrata subsp.
lyrata]
Length = 60
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 191 MKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDI 240
M GLKQKKAHL EIQ+NGG +A+KV YA+ FF K P+ F + ++ +
Sbjct: 1 MIGLKQKKAHLNEIQINGGDVAKKVVYAHSFF-KSTPLMYFFTINVLLKV 49
>gi|383449889|ref|YP_005356610.1| 50S ribosomal protein L3 [Flavobacterium indicum GPTSA100-9]
gi|380501511|emb|CCG52553.1| 50S ribosomal protein L3 [Flavobacterium indicum GPTSA100-9]
Length = 205
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Query: 209 GTIAEKVDYAYGFFEKQ------IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 262
GT+A+K + FE + I VD +F + E +D++GV+KGKG++GVV R G +
Sbjct: 72 GTVAKKKVVEFQGFETEYKLGDVINVD-LFAEGEFVDVLGVSKGKGFQGVVKRHGFGGVG 130
Query: 263 RKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
+ T H LR +GA +P+RV + AG+ G + T N +V K+
Sbjct: 131 QATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRTGGENVTVQNLRVLKV 180
>gi|145497859|ref|XP_001434918.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402046|emb|CAK67521.1| unnamed protein product [Paramecium tetraurelia]
Length = 44
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAF 52
MSHRKFE PRHG+LGF PRKR HRG+++ F
Sbjct: 1 MSHRKFEAPRHGNLGFTPRKRTKHHRGRIRDF 32
>gi|83816242|ref|YP_445167.1| 50S ribosomal protein L3 [Salinibacter ruber DSM 13855]
gi|109893553|sp|Q2S3R4.1|RL3_SALRD RecName: Full=50S ribosomal protein L3
gi|83757636|gb|ABC45749.1| ribosomal protein L3 [Salinibacter ruber DSM 13855]
Length = 208
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 226 IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH---RGLRKVACIGA-WHPA 281
+ V +FQ+DE ID++GV+KGKG++GVV R G + + TH R IGA P+
Sbjct: 96 VRVQDLFQEDERIDVVGVSKGKGFQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPS 155
Query: 282 RVSFTVARAGQNGYHHRTEMNKKVYKL 308
RV V AGQ G N +V ++
Sbjct: 156 RVFKGVRMAGQTGGERTKIQNLRVVRI 182
>gi|119630151|gb|EAX09746.1| hCG1794419, isoform CRA_b [Homo sapiens]
Length = 112
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 40/53 (75%)
Query: 118 GLRSLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQL 170
GLR+ ++A+H+++E +R F N KS+KKAFTKY K+++ ++GKK ++ ++
Sbjct: 1 GLRTFKAIFAEHINDECKRCFSNNRHKSRKKAFTKYCKKWQDEDGKKQLEKRV 53
>gi|381398001|ref|ZP_09923409.1| 50S ribosomal protein L3 [Microbacterium laevaniformans OR221]
gi|380774667|gb|EIC07963.1| 50S ribosomal protein L3 [Microbacterium laevaniformans OR221]
Length = 219
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW--- 256
HL E++ A+ DY+ G +++ VDA F+ +++D++G +KGKG GV+ R
Sbjct: 86 HLTEVRT-----ADAADYSLG---QELTVDATFEAGQLVDVVGTSKGKGTAGVMKRHNFK 137
Query: 257 GVTRLPRKTHRGLRKVACIGAWH-PARVSFTVARAGQNGYHHRTEMNKKVYKL 308
GV+ HR RK IGA P+RV + AG+ G T +N V+ +
Sbjct: 138 GVS-ASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLTVHAV 189
>gi|312130549|ref|YP_003997889.1| 50S ribosomal protein L3 [Leadbetterella byssophila DSM 17132]
gi|311907095|gb|ADQ17536.1| LSU ribosomal protein L3P [Leadbetterella byssophila DSM 17132]
Length = 205
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 222 FEKQ------IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKV 272
FEK+ I V+ VF + E +D+ G TKGKG++GVV R G + + T H LR
Sbjct: 84 FEKEFALGDTIKVEDVFVEGEFVDVSGNTKGKGFQGVVKRHGFGGVGQSTHGQHNRLRAP 143
Query: 273 ACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
IGA +PARV + AG+ G T N +V KL
Sbjct: 144 GSIGACSYPARVFKGLRMAGRMGNTKVTIQNLQVLKL 180
>gi|302315353|gb|ADL14525.1| ribosomal protein L3-B3 [Triticum aestivum]
Length = 25
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/25 (92%), Positives = 24/25 (96%)
Query: 24 RKFEHPRHGSLGFLPRKRAARHRGK 48
RKFEHPRHGSLGFLPRKR +RHRGK
Sbjct: 1 RKFEHPRHGSLGFLPRKRCSRHRGK 25
>gi|218117235|emb|CAQ37747.1| 60S ribosomal protein L3 [Brachionus plicatilis]
Length = 130
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 288 ARAGQNGYHHRTEMNKKVYKLGKGGQESHTGITEFD 323
ARAGQ GYHHRTE+NKKVY++G G +++ TEFD
Sbjct: 1 ARAGQKGYHHRTEINKKVYRIGSGADKANAK-TEFD 35
>gi|116748990|ref|YP_845677.1| 50S ribosomal protein L3 [Syntrophobacter fumaroxidans MPOB]
gi|166990941|sp|A0LIJ0.1|RL3_SYNFM RecName: Full=50S ribosomal protein L3
gi|116698054|gb|ABK17242.1| LSU ribosomal protein L3P [Syntrophobacter fumaroxidans MPOB]
Length = 210
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 231 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG-AWHPARVSFTVA 288
VF+ E ID+IG TKGKGY G + RWG R P + +R+ G A P RV
Sbjct: 101 VFEIGERIDVIGTTKGKGYAGTIKRWGFQRGPSGHGSKNIREPGSTGNATFPGRVIKGKK 160
Query: 289 RAGQNGYHHRTEMNKKVYKL 308
GQ G T MN ++ +
Sbjct: 161 MPGQKGNKRTTVMNLRIIDV 180
>gi|319952196|ref|YP_004163463.1| 50S ribosomal protein L3 [Cellulophaga algicola DSM 14237]
gi|319420856|gb|ADV47965.1| LSU ribosomal protein L3P [Cellulophaga algicola DSM 14237]
Length = 205
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 211 IAEKVDYAYGF-FEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---H 266
+ E D+ G+ I VD +F + E +D IG++KGKG++GVV R G + + T H
Sbjct: 79 VVEFRDFEGGYKLGDTIGVD-LFVEGEFVDAIGISKGKGFQGVVKRHGFAGVGQATHGQH 137
Query: 267 RGLRKVACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
LR +GA +PARV + AG+ G T N KV K+
Sbjct: 138 NRLRAPGSVGAASYPARVFKGMKMAGRMGTDKVTVQNLKVLKV 180
>gi|305665137|ref|YP_003861424.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170]
gi|88709889|gb|EAR02121.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170]
Length = 207
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 226 IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPA 281
I VD VF + E +D++G +KGKG++GVV R G + + T H LR IGA +PA
Sbjct: 95 IGVD-VFVEGEFVDVVGTSKGKGFQGVVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPA 153
Query: 282 RVSFTVARAGQNGYHHRTEMNKKVYKL 308
RV + AG+ G T N +V K+
Sbjct: 154 RVFKGMRMAGRMGGDRTTVQNLRVLKI 180
>gi|429727121|ref|ZP_19261900.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 473 str. F0040]
gi|429144825|gb|EKX87932.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 473 str. F0040]
Length = 204
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 231 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVACIGAW-HPARVSFT 286
+F +++ +D++G +KGKG++GVV R G + + TH LRK IGA +PA+V
Sbjct: 98 LFGENDFVDVVGTSKGKGFQGVVKRHGFGGVGQSTHGQDDRLRKPGSIGACSYPAKVFKG 157
Query: 287 VARAGQNGYHHRTEMNKKVYKL 308
+ GQ G T N KV K+
Sbjct: 158 LRMGGQMGGKRVTTQNLKVLKV 179
>gi|325287048|ref|YP_004262838.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489]
gi|324322502|gb|ADY29967.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489]
Length = 205
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 232 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSFTV 287
F + E +D++G +KGKG++GVV R G + + T H LR IGA +PARV +
Sbjct: 100 FVEGEFVDVVGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGM 159
Query: 288 ARAGQNGYHHRTEMNKKVYKL 308
AG+ G T N +VYK+
Sbjct: 160 KMAGRMGGERVTVQNLRVYKV 180
>gi|163786190|ref|ZP_02180638.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1]
gi|159878050|gb|EDP72106.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1]
Length = 205
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAV----FQKDEMIDIIGVTKGKGYEGVV 253
KA L + G ++ KV GF E+ DA+ F + E +D+ G +KGKG++GVV
Sbjct: 62 KADLGHAKKAGTSVKRKVVEFKGFGEEYKLGDAITVEQFTEGEFVDVAGTSKGKGFQGVV 121
Query: 254 TRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
R G + + T H LR IGA +PARV + AG+ G N +VYK+
Sbjct: 122 KRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGETVKVQNLRVYKV 180
>gi|323344636|ref|ZP_08084860.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269]
gi|323093906|gb|EFZ36483.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269]
Length = 204
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 231 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVACIGAW-HPARVSFT 286
+F+ E +D+IG +KGKG++GVV R G + + TH RK IGA +PA+V
Sbjct: 98 LFEGTEFVDVIGTSKGKGFQGVVKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKG 157
Query: 287 VARAGQNGYHHRTEMNKKVYKL 308
+ AGQ G T N +V K+
Sbjct: 158 MRMAGQMGGDRVTTQNLRVLKV 179
>gi|323357372|ref|YP_004223768.1| 50S ribosomal protein L3 [Microbacterium testaceum StLB037]
gi|323273743|dbj|BAJ73888.1| ribosomal protein L3 [Microbacterium testaceum StLB037]
Length = 219
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 13/113 (11%)
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW--- 256
HL E++ A+ DY G +++ VD +F+ +++D++G +KGKG GV+ R
Sbjct: 86 HLTEVRT-----ADAADYTLG---QELTVDGLFEAGQLVDVVGTSKGKGTAGVMKRHNFK 137
Query: 257 GVTRLPRKTHRGLRKVACIGAWH-PARVSFTVARAGQNGYHHRTEMNKKVYKL 308
GV+ HR RK IGA P+RV + AG+ G T +N V+ +
Sbjct: 138 GVS-ASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLTVHAV 189
>gi|213962845|ref|ZP_03391105.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno]
gi|213954502|gb|EEB65824.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno]
Length = 225
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGF-----FEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
KA L + G ++ +KV GF I VD F + E +DI GV+KGKG++GV
Sbjct: 82 KAELGHFKKAGTSVKKKVVEFQGFEDNYKLGDTITVD-FFTEGEFVDITGVSKGKGFQGV 140
Query: 253 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
V R G + + T H LR +GA +P+RV + AG+ G T N KV K+
Sbjct: 141 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 200
>gi|256819982|ref|YP_003141261.1| 50S ribosomal protein L3 [Capnocytophaga ochracea DSM 7271]
gi|315225401|ref|ZP_07867215.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287]
gi|420159712|ref|ZP_14666510.1| 50S ribosomal protein L3 [Capnocytophaga ochracea str. Holt 25]
gi|256581565|gb|ACU92700.1| ribosomal protein L3 [Capnocytophaga ochracea DSM 7271]
gi|314944674|gb|EFS96709.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287]
gi|394761763|gb|EJF44091.1| 50S ribosomal protein L3 [Capnocytophaga ochracea str. Holt 25]
Length = 205
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGF-----FEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
KA L + G ++ +KV GF I VD F + E +DI GV+KGKG++GV
Sbjct: 62 KAELGHFKKAGTSVKKKVVEFQGFEDNYKLGDTITVD-FFTEGEFVDITGVSKGKGFQGV 120
Query: 253 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
V R G + + T H LR +GA +P+RV + AG+ G T N KV K+
Sbjct: 121 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 180
>gi|429746494|ref|ZP_19279842.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 380 str.
F0488]
gi|429166100|gb|EKY08107.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 380 str.
F0488]
Length = 205
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGF-----FEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
KA L + G ++ +KV GF I VD F + E +DI GV+KGKG++GV
Sbjct: 62 KAELGHFKKAGTSVKKKVVEFQGFEDNYKLGDTITVD-FFTEGEFVDITGVSKGKGFQGV 120
Query: 253 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
V R G + + T H LR +GA +P+RV + AG+ G T N KV K+
Sbjct: 121 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 180
>gi|393779790|ref|ZP_10368025.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|420149443|ref|ZP_14656619.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|392609747|gb|EIW92550.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|394753666|gb|EJF37173.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 335 str.
F0486]
Length = 195
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGFFEK-----QIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
KA L + G ++ +KV GF + I VD F + E +DI GV+KGKG++GV
Sbjct: 52 KAELGHFKKAGTSVKKKVVEFQGFEDNYKLGDTITVD-FFTEGEFVDITGVSKGKGFQGV 110
Query: 253 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
V R G + + T H LR +GA +P+RV + AG+ G T N KV K+
Sbjct: 111 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 170
>gi|258648159|ref|ZP_05735628.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259]
gi|260852040|gb|EEX71909.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259]
Length = 206
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 161 EGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYG 220
EG ++Q ++ K+ + +L H + K K HL E D +
Sbjct: 43 EGYNAVQLGFQEAKEKNTTAPLLGHFK----KAGTTPKRHLAEFT--------GFDKEFN 90
Query: 221 FFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVACIGA 277
+ I V VF+ E +D++G +KG G++GV+ R G + + TH RK IGA
Sbjct: 91 LGD-TITVADVFEGVEYVDVVGTSKGHGFQGVMKRHGFGGVGQSTHGQDDRARKPGAIGA 149
Query: 278 W-HPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
+PA+V + AGQ G T N KV K+
Sbjct: 150 CSYPAKVFKGMRMAGQMGNRRATNQNLKVIKV 181
>gi|429756987|ref|ZP_19289545.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 324 str.
F0483]
gi|429169761|gb|EKY11498.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 324 str.
F0483]
Length = 205
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGF-----FEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
KA L + G ++ KV GF I VD F + E +DI GV+KGKG++GV
Sbjct: 62 KAELGHFKKAGTSVKRKVVEFQGFEDNYKLGDTITVD-FFTEGEFVDITGVSKGKGFQGV 120
Query: 253 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
V R G + + T H LR +GA +P+RV + AG+ G T N KV K+
Sbjct: 121 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 180
>gi|28212175|ref|NP_783119.1| 50S ribosomal protein L3 [Clostridium tetani E88]
gi|42559625|sp|Q890N9.1|RL3_CLOTE RecName: Full=50S ribosomal protein L3
gi|28204619|gb|AAO37056.1| LSU ribosomal protein L3P [Clostridium tetani E88]
Length = 209
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 224 KQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHRGLRKVACIGAWH 279
++I VD +F+ E ID+ G +KGKGY+G++ RW R P K HR + + A +
Sbjct: 95 QEIKVD-IFEAGEKIDVTGTSKGKGYQGIIKRWNAHRGPMSHGSKFHRAVGSMGA--ASY 151
Query: 280 PARVSFTVARAGQNGYHHRTEMNKKVYK 307
PAR AG G T +N +V K
Sbjct: 152 PARTFKNKRMAGHMGNVKSTVLNLEVVK 179
>gi|260061897|ref|YP_003194977.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501]
gi|88786030|gb|EAR17199.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501]
Length = 196
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 231 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSFT 286
+F++ E +D+ G++KGKG++GVV R G + + T H LR IGA P+RV
Sbjct: 90 LFKEGEFVDVNGISKGKGFQGVVKRHGFGGVGQSTHGQHNRLRAPGSIGAASDPSRVFKG 149
Query: 287 VARAGQNGYHHRTEMNKKVYKL 308
+ AGQ G T N +V K+
Sbjct: 150 MKMAGQMGNQRVTVQNLRVLKV 171
>gi|304384275|ref|ZP_07366686.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973]
gi|304334591|gb|EFM00873.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973]
Length = 204
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 231 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG---LRKVACIGAW-HPARVSFT 286
+F E +D++G +KGKG++GVV R G + + TH RK IGA +PA+V
Sbjct: 98 LFNDTEFVDVVGTSKGKGFQGVVKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKG 157
Query: 287 VARAGQNGYHHRTEMNKKVYKL 308
+ AGQ G T N +V K+
Sbjct: 158 MRMAGQMGGDRVTTQNLRVLKV 179
>gi|126662264|ref|ZP_01733263.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38]
gi|126625643|gb|EAZ96332.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38]
Length = 205
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 226 IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGA-WHPA 281
I VD +F + E +D++GV+KGKG++GVV R G + + T H LR +GA +P+
Sbjct: 95 IAVD-LFAEGEFVDVLGVSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPS 153
Query: 282 RVSFTVARAGQNGYHHRTEMNKKVYKL 308
RV + AG+ G + T N +V K+
Sbjct: 154 RVFKGMRMAGRMGGDNVTVQNLRVLKV 180
>gi|386820890|ref|ZP_10108106.1| 50S ribosomal protein L3, bacterial [Joostella marina DSM 19592]
gi|386425996|gb|EIJ39826.1| 50S ribosomal protein L3, bacterial [Joostella marina DSM 19592]
Length = 205
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 232 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSFTV 287
F + E ID+ G +KGKG++GVV R G + + T H LR IGA +PARV +
Sbjct: 100 FVEGEFIDVTGTSKGKGFQGVVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPARVFKGM 159
Query: 288 ARAGQNGYHHRTEMNKKVYKL 308
AGQ G T N +V K+
Sbjct: 160 RMAGQMGAERVTVQNLRVLKV 180
>gi|325000492|ref|ZP_08121604.1| ribosomal protein L3 [Pseudonocardia sp. P1]
Length = 225
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
HL+E++ A+ DY G ++I +A F + +D++GVTKGKG+ GV+ R G
Sbjct: 91 HLLELRT-----ADAADYTPG---QEITAEA-FAEIAEVDVVGVTKGKGFAGVMKRHGFA 141
Query: 260 RL--PRKTHRGLRKVACIGAWH-PARVSFTVARAGQNGYHHRTEMNKKVYKL 308
L T R R IG P RV V AG+ G +T N KV+++
Sbjct: 142 GLGASHGTQRKHRSPGSIGGCATPGRVFKGVRMAGRMGSERQTTQNLKVHRV 193
>gi|154343495|ref|XP_001567693.1| putative ribosomal protein L3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065025|emb|CAM43137.1| putative ribosomal protein L3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 154
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 285 FTVARAGQNGYHHRTEMNKKVYKLGKG-GQESHTGITEFD 323
+TVARAGQ+GYHHRT++NKK+Y++G+ E + T +D
Sbjct: 2 YTVARAGQHGYHHRTQLNKKIYQIGRTVAVEPNQATTTYD 41
>gi|384098721|ref|ZP_09999834.1| 50S ribosomal protein L3 [Imtechella halotolerans K1]
gi|383835164|gb|EID74592.1| 50S ribosomal protein L3 [Imtechella halotolerans K1]
Length = 205
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 232 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPARVSFTV 287
F + E ID+ G +KGKG++GVV R G + + T H LR IGA +PARV +
Sbjct: 100 FVEGEFIDVTGTSKGKGFQGVVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPARVFKGI 159
Query: 288 ARAGQNGYHHRTEMNKKVYKL 308
AG+ G T N KV K+
Sbjct: 160 RMAGRMGAEKVTVQNLKVLKV 180
>gi|125975384|ref|YP_001039294.1| 50S ribosomal protein L3 [Clostridium thermocellum ATCC 27405]
gi|256005329|ref|ZP_05430295.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360]
gi|281419346|ref|ZP_06250361.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20]
gi|385777820|ref|YP_005686985.1| 50S ribosomal protein L3 [Clostridium thermocellum DSM 1313]
gi|419723226|ref|ZP_14250359.1| 50S ribosomal protein L3 [Clostridium thermocellum AD2]
gi|419727129|ref|ZP_14254135.1| 50S ribosomal protein L3 [Clostridium thermocellum YS]
gi|166233136|sp|A3DJH2.1|RL3_CLOTH RecName: Full=50S ribosomal protein L3
gi|125715609|gb|ABN54101.1| 50S ribosomal protein L3 [Clostridium thermocellum ATCC 27405]
gi|255990765|gb|EEU00881.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360]
gi|281406966|gb|EFB37229.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20]
gi|316939500|gb|ADU73534.1| 50S ribosomal protein L3 [Clostridium thermocellum DSM 1313]
gi|380769534|gb|EIC03448.1| 50S ribosomal protein L3 [Clostridium thermocellum YS]
gi|380780691|gb|EIC10356.1| 50S ribosomal protein L3 [Clostridium thermocellum AD2]
Length = 212
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 222 FEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGA-W 278
+++I V+ +FQ + +D+ G++KGKG+ GV+ R+G R ++TH + R+V +GA
Sbjct: 93 LKQEIKVEEMFQPGDRVDVTGISKGKGFAGVIKRFG-NRRGKETHGSMYHRRVGSMGANT 151
Query: 279 HPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
+PARV G G T N V K+
Sbjct: 152 NPARVFKGKKLPGHMGVERVTVQNLDVVKV 181
>gi|332881056|ref|ZP_08448724.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680968|gb|EGJ53897.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 205
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 198 KAHLMEIQVNGGTIAEKVDYAYGF-----FEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
KA L + G ++ +KV GF I VD F + E +D+ G++KGKG++GV
Sbjct: 62 KAELGHFKKAGSSVKKKVIEFQGFEDNYKLGDTITVD-FFAEGEFVDVSGISKGKGFQGV 120
Query: 253 VTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
V R G + + T H LR +GA +P+RV + AG+ G T N KV K+
Sbjct: 121 VRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLKV 180
>gi|390954638|ref|YP_006418396.1| 50S ribosomal protein L3 [Aequorivita sublithincola DSM 14238]
gi|390420624|gb|AFL81381.1| LSU ribosomal protein L3P [Aequorivita sublithincola DSM 14238]
Length = 203
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 209 GTIAE-KVDYAYGFFEKQIPVDAV----FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 263
GT+A+ KV GF EK D + F + E +DI G +KGKG++GVV R G + +
Sbjct: 70 GTVAKRKVVEFKGFEEKYKLGDTITVEHFIEGEFVDIAGTSKGKGFQGVVKRHGFAGVGQ 129
Query: 264 KT---HRGLRKVACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
T H LR IGA +PARV + AGQ G N KV K+
Sbjct: 130 ATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNERVKVENLKVLKV 178
>gi|333377082|ref|ZP_08468818.1| 50S ribosomal protein L3 [Dysgonomonas mossii DSM 22836]
gi|332886295|gb|EGK06539.1| 50S ribosomal protein L3 [Dysgonomonas mossii DSM 22836]
Length = 206
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 226 IPVDAVFQKDE-MIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HP 280
I VD +F D+ ID+ GV+KGKG++GVV R G + T H LR IGA +P
Sbjct: 94 ITVDGMFSMDDPFIDVTGVSKGKGFQGVVKRHGFRGVGEATLGQHNRLRAPGSIGACSYP 153
Query: 281 ARVSFTVARAGQNGYHHRTEMNKKVYKL 308
A+V GQ G T N + K+
Sbjct: 154 AKVFKGTRMGGQMGNKQVTVQNLVIIKI 181
>gi|340618486|ref|YP_004736939.1| 50S ribosomal protein L3 [Zobellia galactanivorans]
gi|339733283|emb|CAZ96660.1| Ribosomal protein L3 [Zobellia galactanivorans]
Length = 205
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 226 IPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPA 281
+ VD +F + E +D+IG +KGKG++GVV R G + + T H LR IGA +PA
Sbjct: 95 VGVD-LFVEGEFVDVIGTSKGKGFQGVVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPA 153
Query: 282 RVSFTVARAGQNGYHHRTEMNKKVYKL 308
RV + AG+ G T N +V K+
Sbjct: 154 RVFKGMKMAGRMGGERVTIQNLRVLKV 180
>gi|50955566|ref|YP_062854.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07]
gi|81826588|sp|Q6ACZ5.1|RL3_LEIXX RecName: Full=50S ribosomal protein L3
gi|50952048|gb|AAT89749.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 219
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 13/113 (11%)
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR---W 256
HL E++ A+ +Y+ G +++ VD F+ +++D++G +K KG+ GV+ R
Sbjct: 86 HLTEVRT-----ADAAEYSAG---QELTVDGTFEAGQLVDVVGTSKSKGFAGVMKRHNFQ 137
Query: 257 GVTRLPRKTHRGLRKVACIGAWH-PARVSFTVARAGQNGYHHRTEMNKKVYKL 308
GV+ HR RK IGA P+RV + AG+ G T +N KV +
Sbjct: 138 GVS-ASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLKVQAI 189
>gi|339626625|ref|YP_004718268.1| 50S ribosomal protein L3 [Sulfobacillus acidophilus TPY]
gi|379006077|ref|YP_005255528.1| 50S ribosomal protein L3 [Sulfobacillus acidophilus DSM 10332]
gi|339284414|gb|AEJ38525.1| 50S ribosomal protein L3 [Sulfobacillus acidophilus TPY]
gi|361052339|gb|AEW03856.1| 50S ribosomal protein L3 [Sulfobacillus acidophilus DSM 10332]
Length = 216
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 14/90 (15%)
Query: 228 VDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP----RKTHR-----GLRKVACIGAW 278
VD FQ +++D+IG +KGKG+ G + RWG R P K HR G R G
Sbjct: 98 VDEAFQPGDVVDVIGTSKGKGFAGAIKRWGFHRGPMSHGSKYHRRVGSLGPRTSGGGGRV 157
Query: 279 HPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
HP R G+ G+ T +N KV ++
Sbjct: 158 HPGR-----RMPGRKGHARVTVLNLKVVRV 182
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,175,055,877
Number of Sequences: 23463169
Number of extensions: 213155538
Number of successful extensions: 511308
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 953
Number of HSP's that attempted gapping in prelim test: 508134
Number of HSP's gapped (non-prelim): 2422
length of query: 323
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 181
effective length of database: 9,027,425,369
effective search space: 1633963991789
effective search space used: 1633963991789
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)