Query 038175
Match_columns 155
No_of_seqs 124 out of 1742
Neff 10.0
Searched_HMMs 13730
Date Mon Mar 25 14:06:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038175.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/038175hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 100.0 2.3E-28 1.7E-32 164.7 16.4 134 2-136 11-176 (183)
2 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.9 1.8E-21 1.3E-25 116.4 12.5 82 58-139 4-89 (90)
3 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.9 2.2E-21 1.6E-25 117.2 11.3 77 59-135 15-91 (96)
4 d2cpja1 d.58.7.1 (A:65-150) No 99.9 3.6E-21 2.6E-25 114.0 10.3 78 60-137 6-83 (86)
5 d2cpda1 d.58.7.1 (A:223-308) A 99.9 8.3E-21 6.1E-25 112.5 11.6 80 59-138 5-84 (86)
6 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 4.6E-21 3.3E-25 112.6 10.2 74 62-135 2-81 (82)
7 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.8 6.4E-21 4.7E-25 113.4 10.8 80 57-136 2-87 (88)
8 d1fxla1 d.58.7.1 (A:37-118) Hu 99.8 7.6E-21 5.5E-25 111.7 10.9 74 62-135 2-81 (82)
9 d2cqba1 d.58.7.1 (A:1-89) Pept 99.8 4.4E-21 3.2E-25 114.4 9.8 80 60-139 3-88 (89)
10 d1whwa_ d.58.7.1 (A:) Probable 99.8 2.4E-20 1.8E-24 113.2 12.7 81 58-138 4-90 (99)
11 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.8 2E-20 1.4E-24 112.3 12.0 78 59-136 4-87 (93)
12 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.8 1.1E-20 8E-25 113.5 10.8 79 59-137 6-90 (93)
13 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 3.9E-20 2.8E-24 111.1 13.0 81 57-137 6-90 (93)
14 d2cq0a1 d.58.7.1 (A:231-320) E 99.8 9.3E-21 6.7E-25 113.2 10.2 80 58-137 4-89 (90)
15 d2cpha1 d.58.7.1 (A:454-547) P 99.8 2E-20 1.5E-24 112.5 11.4 81 58-138 4-92 (94)
16 d2cpza1 d.58.7.1 (A:383-484) C 99.8 1.4E-20 1.1E-24 114.8 10.6 82 58-139 14-101 (102)
17 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 1.4E-20 1E-24 114.0 10.3 79 58-138 11-90 (98)
18 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 4.1E-20 3E-24 111.4 12.2 79 58-136 10-91 (95)
19 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 2.5E-20 1.8E-24 109.6 11.0 78 57-134 3-82 (83)
20 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 4.7E-21 3.4E-25 112.0 7.1 77 63-139 2-79 (80)
21 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 1.4E-20 1E-24 112.2 9.3 77 61-137 7-87 (89)
22 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 7E-20 5.1E-24 111.9 12.5 83 54-137 2-90 (103)
23 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 1.9E-20 1.4E-24 109.1 9.3 75 60-136 3-77 (79)
24 d1whxa_ d.58.7.1 (A:) Probable 99.8 2.9E-20 2.1E-24 115.1 10.5 76 61-136 9-84 (111)
25 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 4E-20 2.9E-24 107.5 10.4 72 64-135 2-78 (78)
26 d1wg1a_ d.58.7.1 (A:) Probable 99.8 2.8E-20 2.1E-24 110.5 9.9 77 60-137 3-79 (88)
27 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.8 6E-20 4.3E-24 118.0 12.0 81 59-139 39-125 (139)
28 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 3.2E-20 2.4E-24 108.4 9.6 73 63-135 1-79 (80)
29 d2adca1 d.58.7.1 (A:335-443) P 99.8 5.9E-20 4.3E-24 113.4 11.1 76 62-137 2-79 (109)
30 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 1.2E-19 9E-24 107.7 12.1 81 57-137 3-85 (88)
31 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 3.4E-20 2.5E-24 108.6 9.4 73 63-135 2-80 (81)
32 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.8 4.6E-20 3.3E-24 110.1 10.0 79 60-138 3-87 (90)
33 d1wexa_ d.58.7.1 (A:) Heteroge 99.8 2.2E-19 1.6E-23 109.9 13.2 84 57-140 10-95 (104)
34 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 1.2E-19 9E-24 112.8 12.1 77 59-135 4-83 (114)
35 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.8 1.3E-19 9.8E-24 104.4 10.8 72 65-137 1-72 (75)
36 d2adca2 d.58.7.1 (A:444-531) P 99.8 9.2E-20 6.7E-24 108.3 10.3 78 59-136 7-87 (88)
37 d3begb1 d.58.7.1 (B:121-207) S 99.8 1E-20 7.5E-25 112.2 6.0 73 63-136 1-73 (87)
38 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 7.1E-20 5.2E-24 108.1 9.6 72 65-136 1-81 (85)
39 d1whya_ d.58.7.1 (A:) Putative 99.8 1.5E-19 1.1E-23 109.3 11.0 78 59-136 14-93 (97)
40 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 6.1E-20 4.4E-24 108.4 8.7 75 63-137 2-82 (85)
41 d1b7fa2 d.58.7.1 (A:205-289) S 99.8 1.3E-19 9.7E-24 106.9 9.9 75 59-133 3-85 (85)
42 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 1.2E-19 8.6E-24 109.8 9.6 82 56-138 9-90 (98)
43 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 6.4E-20 4.7E-24 110.7 7.9 82 58-139 12-94 (96)
44 d1fxla2 d.58.7.1 (A:119-203) H 99.8 1.8E-19 1.3E-23 106.4 9.7 74 60-133 4-85 (85)
45 d2cpea1 d.58.7.1 (A:353-453) R 99.8 1.7E-19 1.3E-23 109.8 9.3 82 57-138 3-98 (101)
46 d2cqca1 d.58.7.1 (A:109-191) A 99.8 2.9E-19 2.1E-23 105.0 9.8 71 60-130 7-83 (83)
47 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 1.9E-19 1.4E-23 105.8 8.9 74 65-138 1-81 (83)
48 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 1.6E-19 1.2E-23 107.2 8.1 78 60-139 3-81 (88)
49 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 2.5E-19 1.8E-23 106.0 8.8 75 60-135 2-84 (86)
50 d1nu4a_ d.58.7.1 (A:) Spliceso 99.8 4.4E-19 3.2E-23 105.9 9.8 77 61-137 2-85 (91)
51 d2cqga1 d.58.7.1 (A:96-185) TA 99.8 9.5E-19 6.9E-23 104.1 10.8 78 58-137 4-87 (90)
52 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 5.7E-19 4.2E-23 107.6 9.9 76 62-138 20-101 (103)
53 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 1.3E-18 9.5E-23 105.2 11.5 79 58-136 4-94 (98)
54 d1x4da1 d.58.7.1 (A:8-96) Matr 99.8 1.2E-18 8.4E-23 103.6 10.4 79 58-136 4-85 (89)
55 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 2.7E-19 2E-23 109.5 7.5 77 61-137 7-89 (104)
56 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 1.3E-18 9.3E-23 102.3 10.1 76 59-135 3-84 (84)
57 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 1.4E-19 1E-23 110.4 5.8 80 59-138 15-100 (102)
58 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 3.1E-18 2.2E-22 104.7 11.7 80 59-140 12-98 (104)
59 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.8 7.3E-19 5.3E-23 106.5 8.7 79 58-136 14-95 (99)
60 d1weya_ d.58.7.1 (A:) Calcipre 99.8 1.1E-18 7.8E-23 106.5 9.3 81 60-140 3-88 (104)
61 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 2.1E-18 1.5E-22 100.3 9.9 71 62-133 2-78 (79)
62 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 4.3E-19 3.2E-23 108.0 7.1 78 58-135 14-96 (101)
63 d2adba1 d.58.7.1 (A:177-284) P 99.8 1.9E-18 1.4E-22 106.3 10.0 79 59-137 4-86 (108)
64 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 1.4E-18 1.1E-22 105.5 9.2 73 62-135 18-96 (101)
65 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 2.3E-19 1.7E-23 107.1 5.3 77 58-135 9-90 (91)
66 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 1.9E-18 1.4E-22 99.5 8.4 69 64-133 1-75 (75)
67 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 7.1E-19 5.2E-23 101.8 6.2 70 63-133 1-76 (77)
68 d2cpia1 d.58.7.1 (A:101-189) E 99.8 1.3E-18 9.2E-23 103.5 7.4 73 59-131 5-89 (89)
69 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 3.2E-18 2.4E-22 103.1 9.3 76 62-137 1-86 (96)
70 d2msta_ d.58.7.1 (A:) Neural R 99.8 1.5E-18 1.1E-22 100.0 7.4 69 64-133 1-75 (75)
71 d2ghpa2 d.58.7.1 (A:41-115) U4 99.7 5.1E-18 3.7E-22 97.6 9.2 70 63-133 1-74 (75)
72 d1zh5a2 d.58.7.1 (A:105-189) L 99.7 7.4E-18 5.4E-22 99.2 9.6 73 61-134 5-82 (85)
73 d1wg5a_ d.58.7.1 (A:) Heteroge 99.7 2.4E-17 1.7E-21 100.6 10.8 83 57-140 10-98 (104)
74 d1x0fa1 d.58.7.1 (A:183-257) N 99.7 3.8E-18 2.8E-22 98.1 6.7 69 64-133 1-75 (75)
75 d2cqpa1 d.58.7.1 (A:917-1002) 99.7 1.1E-17 8.1E-22 98.7 8.2 75 59-133 6-86 (86)
76 d1weza_ d.58.7.1 (A:) Heteroge 99.7 2.5E-17 1.8E-21 100.2 9.2 79 58-138 11-94 (102)
77 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.7 4.9E-18 3.6E-22 97.0 5.3 65 65-129 1-71 (72)
78 d2cpya1 d.58.7.1 (A:536-638) R 99.7 2.3E-17 1.7E-21 100.5 3.6 76 59-135 5-86 (103)
79 d2cq2a1 d.58.7.1 (A:25-125) Al 99.7 3.6E-16 2.6E-20 94.7 8.8 67 57-123 13-81 (101)
80 d1owxa_ d.58.7.1 (A:) Lupus LA 99.6 6.3E-16 4.6E-20 95.5 8.2 75 60-134 9-84 (113)
81 d1u2fa_ d.58.7.1 (A:) Splicing 99.6 8.9E-18 6.5E-22 100.0 -1.0 71 63-134 2-83 (90)
82 d1wela1 d.58.7.1 (A:412-523) R 99.6 7.3E-16 5.3E-20 95.1 4.2 76 59-135 15-96 (112)
83 d1b7fa2 d.58.7.1 (A:205-289) S 99.6 6.7E-15 4.8E-19 86.3 7.4 66 2-67 11-82 (85)
84 d2dita1 d.58.7.1 (A:8-106) HIV 99.6 1.8E-14 1.3E-18 86.8 9.4 81 56-136 2-95 (99)
85 d1wwha1 d.58.7.1 (A:169-249) N 99.5 1.6E-14 1.1E-18 83.7 7.9 73 61-135 3-76 (81)
86 d1fxla2 d.58.7.1 (A:119-203) H 99.5 1.2E-14 8.8E-19 85.2 7.3 66 2-67 11-82 (85)
87 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=2.3e-28 Score=164.65 Aligned_cols=134 Identities=21% Similarity=0.361 Sum_probs=119.5
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcC--------------------
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNG-------------------- 55 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~-------------------- 55 (155)
|.|||+++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|.+|+..+++
T Consensus 11 V~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (183)
T d1u1qa_ 11 IGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQR 90 (183)
T ss_dssp EESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETTEECEEEECCCTTGGGS
T ss_pred EECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcCCcccccchhhhhhhhcccccc
Confidence 689999999999999999 556677778899999999999999999999987665
Q ss_pred CCCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEE
Q 038175 56 SDGKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVR 129 (155)
Q Consensus 56 ~~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~ 129 (155)
.......++|||+|||..+++++|+++|+.||.|..+.+.. ++|+|||+|.+.++|++|++ +++..+.|+.|+
T Consensus 91 ~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~ 169 (183)
T d1u1qa_ 91 PGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCE 169 (183)
T ss_dssp TTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEE
T ss_pred cccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEE
Confidence 33456778999999999999999999999999999998864 25799999999999999997 688899999999
Q ss_pred EEeccCC
Q 038175 130 LSWGHNP 136 (155)
Q Consensus 130 v~~~~~~ 136 (155)
|.++.++
T Consensus 170 V~~A~~k 176 (183)
T d1u1qa_ 170 VRKALSK 176 (183)
T ss_dssp EEECCCH
T ss_pred EEecCCc
Confidence 9998653
No 2
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.8e-21 Score=116.35 Aligned_cols=82 Identities=28% Similarity=0.525 Sum_probs=75.0
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC----CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV----GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWG 133 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~----~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 133 (155)
.....++|||+|||..+++++|+++|++||.|..+.+.. ++++|||+|.+.++|..|++.|+|..+.|+.|+|.|+
T Consensus 4 d~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a 83 (90)
T d2cqia1 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 83 (90)
T ss_dssp CSCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 356678999999999999999999999999999999875 3689999999999999999999999999999999999
Q ss_pred cCCCCC
Q 038175 134 HNPGNK 139 (155)
Q Consensus 134 ~~~~~~ 139 (155)
+++..+
T Consensus 84 ~~~~~~ 89 (90)
T d2cqia1 84 TTPSSQ 89 (90)
T ss_dssp CCTTCC
T ss_pred CCCCCC
Confidence 876554
No 3
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=2.2e-21 Score=117.18 Aligned_cols=77 Identities=31% Similarity=0.658 Sum_probs=73.3
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccC
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHN 135 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 135 (155)
.+..++|||+|||..+++++|+++|++||.|..+++.+++|+|||+|.+.++|..|+..|+|..++|+.|+|+|+++
T Consensus 15 ~~~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~ 91 (96)
T d1x4ga1 15 SPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 91 (96)
T ss_dssp CSSCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEecceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999875
No 4
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=3.6e-21 Score=113.98 Aligned_cols=78 Identities=26% Similarity=0.555 Sum_probs=73.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCCC
Q 038175 60 SNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNPG 137 (155)
Q Consensus 60 ~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 137 (155)
...++|||+|||..+++++|+++|++||.|..+.+.+++++|||+|.+.++|+.|+..|+|..+.|+.|+|+|+.+..
T Consensus 6 ~~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 6 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp CCTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 456789999999999999999999999999999999999999999999999999999999999999999999997653
No 5
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=8.3e-21 Score=112.46 Aligned_cols=80 Identities=19% Similarity=0.304 Sum_probs=74.0
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCCCC
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNPGN 138 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~~ 138 (155)
....++|||+|||..+++++|+++|++||.+..+.+.+.+|+|||+|.+.++|..|+..|+|..+.|+.|+|+|++|+.+
T Consensus 5 ~~~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~~ 84 (86)
T d2cpda1 5 MSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDK 84 (86)
T ss_dssp SSCCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCCC
T ss_pred ccCCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCCC
Confidence 44568999999999999999999999999988888888899999999999999999999999999999999999986543
No 6
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.85 E-value=4.6e-21 Score=112.63 Aligned_cols=74 Identities=26% Similarity=0.522 Sum_probs=69.1
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccC
Q 038175 62 NATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHN 135 (155)
Q Consensus 62 ~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 135 (155)
+++|||+|||.++++++|+++|++||.|..+++.+ .+|+|||+|.+.++|+.|++.|+|..+.|+.|+|+|+++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 56899999999999999999999999999998864 268999999999999999999999999999999999875
No 7
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.85 E-value=6.4e-21 Score=113.40 Aligned_cols=80 Identities=24% Similarity=0.500 Sum_probs=72.7
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEE
Q 038175 57 DGKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG------KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRL 130 (155)
Q Consensus 57 ~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~------~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v 130 (155)
.......+|||+|||..+++++|+++|++||.|..+++..+ +|+|||+|.+.++|+.|+..|||..+.|+.|+|
T Consensus 2 ~~s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V 81 (88)
T d1rk8a_ 2 QRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQV 81 (88)
T ss_dssp CCCC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEE
Confidence 44567889999999999999999999999999999988642 589999999999999999999999999999999
Q ss_pred EeccCC
Q 038175 131 SWGHNP 136 (155)
Q Consensus 131 ~~~~~~ 136 (155)
+|+.++
T Consensus 82 ~~a~~k 87 (88)
T d1rk8a_ 82 DWCFVK 87 (88)
T ss_dssp EESEEC
T ss_pred EEecCC
Confidence 999765
No 8
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=7.6e-21 Score=111.66 Aligned_cols=74 Identities=32% Similarity=0.597 Sum_probs=69.1
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccC
Q 038175 62 NATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG------KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHN 135 (155)
Q Consensus 62 ~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~------~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 135 (155)
..+|||+|||..+++++|+++|++||.|..+++..+ +|+|||+|.+.++|+.|++.|+|..+.|+.|+|.|++|
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 467999999999999999999999999999998642 58999999999999999999999999999999999975
No 9
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=4.4e-21 Score=114.38 Aligned_cols=80 Identities=29% Similarity=0.540 Sum_probs=73.2
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 038175 60 SNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWG 133 (155)
Q Consensus 60 ~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 133 (155)
...++|||+|||.++++++|+++|++||.|..+.++. .+|+|||+|.+.++|+.|+..|+|..++|+.|+|.|+
T Consensus 3 ~~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a 82 (89)
T d2cqba1 3 TTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82 (89)
T ss_dssp CCCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 4578999999999999999999999999999999864 3789999999999999999999999999999999999
Q ss_pred cCCCCC
Q 038175 134 HNPGNK 139 (155)
Q Consensus 134 ~~~~~~ 139 (155)
+++..+
T Consensus 83 ~p~~~k 88 (89)
T d2cqba1 83 KPMRIK 88 (89)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 876443
No 10
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=2.4e-20 Score=113.22 Aligned_cols=81 Identities=26% Similarity=0.433 Sum_probs=73.6
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEE
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLS 131 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 131 (155)
.....++|||+|||..+++++|+++|++||.|..++++. .+|+|||+|.+.++|+.|+..|++..+.|+.|+|.
T Consensus 4 ~~~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~ 83 (99)
T d1whwa_ 4 GSSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVL 83 (99)
T ss_dssp CCCSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEE
T ss_pred CCCCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 345677899999999999999999999999999999875 26899999999999999999999999999999999
Q ss_pred eccCCCC
Q 038175 132 WGHNPGN 138 (155)
Q Consensus 132 ~~~~~~~ 138 (155)
+++++..
T Consensus 84 ~a~~~~~ 90 (99)
T d1whwa_ 84 PSTIKKE 90 (99)
T ss_dssp ECCCCST
T ss_pred ECCCCCc
Confidence 9987543
No 11
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2e-20 Score=112.33 Aligned_cols=78 Identities=28% Similarity=0.536 Sum_probs=72.0
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG------KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~------~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
...+++|||+|||..+++++|+++|++||.|..+.++.+ +|+|||+|.+.++|..|++.|+|..+.|++|+|.|
T Consensus 4 ~~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~ 83 (93)
T d1h2vz_ 4 LKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 83 (93)
T ss_dssp TTTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEE
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 456789999999999999999999999999999998753 57999999999999999999999999999999999
Q ss_pred ccCC
Q 038175 133 GHNP 136 (155)
Q Consensus 133 ~~~~ 136 (155)
+.+.
T Consensus 84 a~~~ 87 (93)
T d1h2vz_ 84 DAGF 87 (93)
T ss_dssp ESCC
T ss_pred cCCC
Confidence 8754
No 12
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.1e-20 Score=113.48 Aligned_cols=79 Identities=29% Similarity=0.547 Sum_probs=72.5
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
....++|||+|||..+++++|+++|++||.|..+++.. .+|+|||+|.+.++|+.|++.|+|..+.|+.|+|+|
T Consensus 6 ~~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ 85 (93)
T d1x5ua1 6 RNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNK 85 (93)
T ss_dssp CCTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34568999999999999999999999999999999864 368999999999999999999999999999999999
Q ss_pred ccCCC
Q 038175 133 GHNPG 137 (155)
Q Consensus 133 ~~~~~ 137 (155)
+++..
T Consensus 86 A~~~~ 90 (93)
T d1x5ua1 86 ASAHN 90 (93)
T ss_dssp TTTTS
T ss_pred cCCCC
Confidence 97754
No 13
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.9e-20 Score=111.05 Aligned_cols=81 Identities=35% Similarity=0.569 Sum_probs=74.2
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC----CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 57 DGKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG----KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 57 ~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~----~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
......++|||+|||..+++++|+++|++||.|..+.+..+ +|+|||+|.+.++|..|+..|+|..++|+.|+|+|
T Consensus 6 ~~~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~ 85 (93)
T d2cq3a1 6 ESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 85 (93)
T ss_dssp CCSCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEe
Confidence 34567789999999999999999999999999999998753 78999999999999999999999999999999999
Q ss_pred ccCCC
Q 038175 133 GHNPG 137 (155)
Q Consensus 133 ~~~~~ 137 (155)
++++.
T Consensus 86 A~~r~ 90 (93)
T d2cq3a1 86 ATARV 90 (93)
T ss_dssp CCSSC
T ss_pred cCcCC
Confidence 98753
No 14
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=9.3e-21 Score=113.16 Aligned_cols=80 Identities=30% Similarity=0.532 Sum_probs=73.2
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEE
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG------KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLS 131 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~------~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 131 (155)
......+|||+|||..+++++|+++|++||.|..+++..+ +|+|||+|.+.++|+.|++.|+|..++|+.|+|+
T Consensus 4 ~~~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~ 83 (90)
T d2cq0a1 4 RADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVE 83 (90)
T ss_dssp CCSSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 3456789999999999999999999999999999998752 5799999999999999999999999999999999
Q ss_pred eccCCC
Q 038175 132 WGHNPG 137 (155)
Q Consensus 132 ~~~~~~ 137 (155)
|+++.+
T Consensus 84 ~akp~~ 89 (90)
T d2cq0a1 84 WAKPST 89 (90)
T ss_dssp ESSCCC
T ss_pred eeeCCC
Confidence 998764
No 15
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=2e-20 Score=112.49 Aligned_cols=81 Identities=31% Similarity=0.611 Sum_probs=73.6
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC-------CCcEEEEEecCHHHHHHHHHHh-cCCeeCCeEEE
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV-------GKGCGFVQFANRKDAEVALQKL-QGTAIGKQTVR 129 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~-------~~g~~~v~f~~~~~a~~a~~~l-~~~~~~g~~l~ 129 (155)
......+|||+|||..+++++|+++|++||.|..++++. .+|+|||+|.+.++|..|++.| +|..+.|++|+
T Consensus 4 ~~~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~ 83 (94)
T d2cpha1 4 KKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLV 83 (94)
T ss_dssp CSSCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEE
Confidence 456778999999999999999999999999999999864 3689999999999999999998 89999999999
Q ss_pred EEeccCCCC
Q 038175 130 LSWGHNPGN 138 (155)
Q Consensus 130 v~~~~~~~~ 138 (155)
|.|++++..
T Consensus 84 V~~A~~~~~ 92 (94)
T d2cpha1 84 LEWADSEVT 92 (94)
T ss_dssp EEECCCCCC
T ss_pred EEEcCCCCC
Confidence 999987654
No 16
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.4e-20 Score=114.80 Aligned_cols=82 Identities=27% Similarity=0.521 Sum_probs=73.7
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEE
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLS 131 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 131 (155)
..+..++|||+|||.++++++|+++|++||.+..+.+.. .+|+|||+|.+.++|+.|++.|+|..++|+.|+|+
T Consensus 14 ~~p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~ 93 (102)
T d2cpza1 14 EGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQ 93 (102)
T ss_dssp CCSTTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 445678899999999999999999999999999888764 25899999999999999999999999999999999
Q ss_pred eccCCCCC
Q 038175 132 WGHNPGNK 139 (155)
Q Consensus 132 ~~~~~~~~ 139 (155)
|++++..+
T Consensus 94 ~a~~k~~~ 101 (102)
T d2cpza1 94 LKRSKNDS 101 (102)
T ss_dssp CCCCSCCC
T ss_pred EeCCCCCC
Confidence 99876543
No 17
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.4e-20 Score=114.01 Aligned_cols=79 Identities=29% Similarity=0.566 Sum_probs=71.3
Q ss_pred CCCCCcEEEEcCCC-CCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCC
Q 038175 58 GKSNNATIFVGALD-SNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNP 136 (155)
Q Consensus 58 ~~~~~~~l~v~~l~-~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~ 136 (155)
......+|||+||| ..+++++|+++|++||.|..+.+. +++|||+|.+.++|++|+..|+|..+.|++|+|.|++++
T Consensus 11 ~~~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i~--rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~ 88 (98)
T d1wf2a_ 11 PRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH--KGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEP 88 (98)
T ss_dssp CSSCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEEE--TEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSC
T ss_pred CCCCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEEe--CCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 44566789999997 578899999999999999999997 799999999999999999999999999999999999765
Q ss_pred CC
Q 038175 137 GN 138 (155)
Q Consensus 137 ~~ 138 (155)
..
T Consensus 89 ~~ 90 (98)
T d1wf2a_ 89 KV 90 (98)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 18
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.1e-20 Score=111.37 Aligned_cols=79 Identities=25% Similarity=0.505 Sum_probs=72.5
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC---CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV---GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGH 134 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~---~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~ 134 (155)
.....++|||+|||..+++++|+++|++||.|..+.+.. .+++|||+|.+.++|+.|++.|||..+.|++|+|+|++
T Consensus 10 ~~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~ 89 (95)
T d1x4aa1 10 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 89 (95)
T ss_dssp CCCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEecc
Confidence 345677899999999999999999999999999988865 47899999999999999999999999999999999987
Q ss_pred CC
Q 038175 135 NP 136 (155)
Q Consensus 135 ~~ 136 (155)
+.
T Consensus 90 ~~ 91 (95)
T d1x4aa1 90 SG 91 (95)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 19
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.84 E-value=2.5e-20 Score=109.63 Aligned_cols=78 Identities=21% Similarity=0.398 Sum_probs=71.7
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC-CcEEEEEecCHHHHHHHHHHhcCCee-CCeEEEEEecc
Q 038175 57 DGKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG-KGCGFVQFANRKDAEVALQKLQGTAI-GKQTVRLSWGH 134 (155)
Q Consensus 57 ~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~-~g~~~v~f~~~~~a~~a~~~l~~~~~-~g~~l~v~~~~ 134 (155)
...+++++|||+|||..+++++|+++|++||.|..+++.++ +|+|||+|.+.++|..|+..|+|..+ +|+.|+|+|++
T Consensus 3 ~~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 3 TEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp CCCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 35677899999999999999999999999999999998764 68999999999999999999999988 57899999986
No 20
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=4.7e-21 Score=112.00 Aligned_cols=77 Identities=21% Similarity=0.408 Sum_probs=70.5
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCC-eeCCeEEEEEeccCCCCC
Q 038175 63 ATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGT-AIGKQTVRLSWGHNPGNK 139 (155)
Q Consensus 63 ~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~-~~~g~~l~v~~~~~~~~~ 139 (155)
.+|||+|||.++++++|+++|++||.+..+.+..++|+|||+|.+.++|+.|++.|+|. .+.|++|+|+|+.++..+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~r 79 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLR 79 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCcC
Confidence 57999999999999999999999999988777777999999999999999999999996 699999999999875443
No 21
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.4e-20 Score=112.19 Aligned_cols=77 Identities=34% Similarity=0.572 Sum_probs=71.2
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC----CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCC
Q 038175 61 NNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV----GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNP 136 (155)
Q Consensus 61 ~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~----~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~ 136 (155)
...+|||+|||..+++++|+++|++||.|..+++.. ++|+|||+|.+.++|+.|++.|+|..++|+.|+|.+++++
T Consensus 7 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~ 86 (89)
T d1cvja2 7 GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 86 (89)
T ss_dssp TTTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 456899999999999999999999999999999875 3689999999999999999999999999999999999865
Q ss_pred C
Q 038175 137 G 137 (155)
Q Consensus 137 ~ 137 (155)
.
T Consensus 87 ~ 87 (89)
T d1cvja2 87 K 87 (89)
T ss_dssp T
T ss_pred C
Confidence 4
No 22
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=7e-20 Score=111.88 Aligned_cols=83 Identities=29% Similarity=0.455 Sum_probs=73.7
Q ss_pred cCCCCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeE
Q 038175 54 NGSDGKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQT 127 (155)
Q Consensus 54 ~~~~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~ 127 (155)
|++..+...++|||+|||..+++++|+++|++||.|..+.+.. ++|+|||+|.+.++|+.|++.+++ .+.|++
T Consensus 2 h~~~~d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~ 80 (103)
T d2cqda1 2 HGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRK 80 (103)
T ss_dssp CCCCCSCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEE
T ss_pred CCCCCCCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEE
Confidence 4455667778999999999999999999999999999999865 378999999999999999998876 799999
Q ss_pred EEEEeccCCC
Q 038175 128 VRLSWGHNPG 137 (155)
Q Consensus 128 l~v~~~~~~~ 137 (155)
|+|.++....
T Consensus 81 l~V~~a~~~~ 90 (103)
T d2cqda1 81 ANVNLAYLGA 90 (103)
T ss_dssp CEEEESTTTC
T ss_pred EEEEEcCCCC
Confidence 9999987653
No 23
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.9e-20 Score=109.14 Aligned_cols=75 Identities=24% Similarity=0.490 Sum_probs=70.5
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCC
Q 038175 60 SNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNP 136 (155)
Q Consensus 60 ~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~ 136 (155)
...++|||+|++ +++++|+++|++||.|..+.+.+++++|||+|.+.++|..|+..|+|..+.|++|+|+|++++
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~ 77 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQ 77 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSS
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCC
Confidence 456899999986 899999999999999999999999999999999999999999999999999999999999753
No 24
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=2.9e-20 Score=115.14 Aligned_cols=76 Identities=22% Similarity=0.370 Sum_probs=72.4
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCC
Q 038175 61 NNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNP 136 (155)
Q Consensus 61 ~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~ 136 (155)
..++|||+|||..+++++|+++|++||.|..+.+.+.+++|||+|.+.++|++|++.|||..+.|+.|.|.|+...
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~ 84 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIG 84 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETT
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEeeccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCC
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999999654
No 25
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=4e-20 Score=107.47 Aligned_cols=72 Identities=26% Similarity=0.475 Sum_probs=67.9
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC-----CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccC
Q 038175 64 TIFVGALDSNVSDKDLRELFSHFGEILSVKIPV-----GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHN 135 (155)
Q Consensus 64 ~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~-----~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 135 (155)
+|||+|||..+++++|+++|++||.|..+++.. .+|+|||+|.+.++|+.|++.|||..+.|++|+|+++.+
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~S 78 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 78 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEECC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 699999999999999999999999999999875 368999999999999999999999999999999999864
No 26
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=2.8e-20 Score=110.51 Aligned_cols=77 Identities=16% Similarity=0.261 Sum_probs=68.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCCC
Q 038175 60 SNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNPG 137 (155)
Q Consensus 60 ~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 137 (155)
....+|||+|||..+++++|+++|++|| +..+.+...+++|||+|.+.++|+.|++.||+..+.|+.|+|+|+++..
T Consensus 3 s~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 3 SGSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDA 79 (88)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEEEGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred CCCCEEEEeCCCCccChHHHHHHHHhcC-ceeeeeeccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 3567899999999999999999999999 3445556678999999999999999999999999999999999996653
No 27
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.83 E-value=6e-20 Score=118.05 Aligned_cols=81 Identities=27% Similarity=0.477 Sum_probs=72.7
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
....++|||+|||.++++++|+++|++||.|..+.+.. .+|+|||+|.+.++|..|++.|||..+.|+.|+|.|
T Consensus 39 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~ 118 (139)
T d1u6fa1 39 PDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVAL 118 (139)
T ss_dssp TTTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 34457899999999999999999999999999998864 268999999999999999999999999999999999
Q ss_pred ccCCCCC
Q 038175 133 GHNPGNK 139 (155)
Q Consensus 133 ~~~~~~~ 139 (155)
+++...+
T Consensus 119 a~~~~~~ 125 (139)
T d1u6fa1 119 AASGHQR 125 (139)
T ss_dssp SSCCCCC
T ss_pred cCCCCCC
Confidence 9765543
No 28
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.2e-20 Score=108.39 Aligned_cols=73 Identities=34% Similarity=0.575 Sum_probs=68.1
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccC
Q 038175 63 ATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG------KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHN 135 (155)
Q Consensus 63 ~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~------~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 135 (155)
.+|||+|||..+++++|+++|++||.|..++++.+ +|+|||+|.++++|..|++.|+|..+.|++|+|.|++.
T Consensus 1 aslfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 1 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp CEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 36999999999999999999999999999998752 58999999999999999999999999999999999853
No 29
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=5.9e-20 Score=113.38 Aligned_cols=76 Identities=26% Similarity=0.494 Sum_probs=70.0
Q ss_pred CcEEEEcCCC-CCCCHHHHHHHhhccCCeEEEEeeCC-CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCCC
Q 038175 62 NATIFVGALD-SNVSDKDLRELFSHFGEILSVKIPVG-KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNPG 137 (155)
Q Consensus 62 ~~~l~v~~l~-~~~~~~~l~~~f~~~g~v~~~~~~~~-~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 137 (155)
+.+|||+||| ..+++++|+++|++||.|..+.+.++ +|+|||+|++.++|.+|++.|+|..+.|+.|+|.|++.+.
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~~ 79 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 79 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCCC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 6799999995 46999999999999999999998765 6899999999999999999999999999999999997543
No 30
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.2e-19 Score=107.74 Aligned_cols=81 Identities=14% Similarity=0.266 Sum_probs=74.5
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHh--cCCeeCCeEEEEEecc
Q 038175 57 DGKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKL--QGTAIGKQTVRLSWGH 134 (155)
Q Consensus 57 ~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l--~~~~~~g~~l~v~~~~ 134 (155)
....++++|||+|||..+++++|+++|++||.|..+.+.+++++|||+|.+.++|+.|++.+ ++..+.|++|+|+|++
T Consensus 3 ~~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk 82 (88)
T d2cq1a1 3 MDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSN 82 (88)
T ss_dssp CCSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECS
T ss_pred CCCCCCCEEEEeCCCCCCCHHHHHHHHhcccccccccccccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECC
Confidence 35678999999999999999999999999999999999999999999999999999999876 5678999999999997
Q ss_pred CCC
Q 038175 135 NPG 137 (155)
Q Consensus 135 ~~~ 137 (155)
.+.
T Consensus 83 ~~~ 85 (88)
T d2cq1a1 83 HKE 85 (88)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 31
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.82 E-value=3.4e-20 Score=108.59 Aligned_cols=73 Identities=14% Similarity=0.294 Sum_probs=67.1
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccC
Q 038175 63 ATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHN 135 (155)
Q Consensus 63 ~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 135 (155)
++|||+|||.++++++|+++|++||.|..+.+.. .+|+|||+|.+.++|+.|++.|||..+.|++|+|++++|
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 6899999999999999999999999997776543 379999999999999999999999999999999999876
No 32
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4.6e-20 Score=110.12 Aligned_cols=79 Identities=28% Similarity=0.589 Sum_probs=71.9
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 038175 60 SNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWG 133 (155)
Q Consensus 60 ~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 133 (155)
...++|||+|||..+++++|+++|++||.|..+.+.. .+|+|||+|.+.++|+.|+..|+|..++|+.|+|.++
T Consensus 3 ~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a 82 (90)
T d1x5sa1 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82 (90)
T ss_dssp CCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 4567899999999999999999999999999988764 3789999999999999999999999999999999999
Q ss_pred cCCCC
Q 038175 134 HNPGN 138 (155)
Q Consensus 134 ~~~~~ 138 (155)
.++..
T Consensus 83 ~~~~~ 87 (90)
T d1x5sa1 83 GKSSD 87 (90)
T ss_dssp ECCCC
T ss_pred CCCCC
Confidence 76543
No 33
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=2.2e-19 Score=109.85 Aligned_cols=84 Identities=21% Similarity=0.212 Sum_probs=75.1
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhc--CCeeCCeEEEEEecc
Q 038175 57 DGKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQ--GTAIGKQTVRLSWGH 134 (155)
Q Consensus 57 ~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~--~~~~~g~~l~v~~~~ 134 (155)
....+.++|||+|||..+++++|+++|++||.|..+.+.+++++|||+|++.++|+.|+..|+ +..++|++|+|+|++
T Consensus 10 ~~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~ 89 (104)
T d1wexa_ 10 HKVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYST 89 (104)
T ss_dssp CCCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECS
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcC
Confidence 345678999999999999999999999999999999999999999999999999999999884 556889999999997
Q ss_pred CCCCCC
Q 038175 135 NPGNKQ 140 (155)
Q Consensus 135 ~~~~~~ 140 (155)
.+....
T Consensus 90 ~~~~~~ 95 (104)
T d1wexa_ 90 SKRITR 95 (104)
T ss_dssp SSSCCC
T ss_pred CCccCC
Confidence 654443
No 34
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.2e-19 Score=112.79 Aligned_cols=77 Identities=16% Similarity=0.384 Sum_probs=71.7
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC---CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccC
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV---GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHN 135 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~---~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 135 (155)
...+++|||+|||..+++++|+++|++||.|..|++.. .+|+|||+|.+.++|..|++.|+|..+.|+.|+|.|+..
T Consensus 4 p~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~ 83 (114)
T d2f9da1 4 PEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNA 83 (114)
T ss_dssp TTCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCH
T ss_pred cCCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 45678999999999999999999999999999999875 379999999999999999999999999999999999864
No 35
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=1.3e-19 Score=104.37 Aligned_cols=72 Identities=18% Similarity=0.384 Sum_probs=67.4
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCCC
Q 038175 65 IFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNPG 137 (155)
Q Consensus 65 l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 137 (155)
|||+|||.++++++|+++|++|| +..+.+.+.+|+|||+|.+.++|++|+..|||..+.|++|+|+|++.+.
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFVDKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDA 72 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEEETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTT
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceeecccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCC
Confidence 79999999999999999999999 6777788889999999999999999999999999999999999997653
No 36
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=9.2e-20 Score=108.32 Aligned_cols=78 Identities=22% Similarity=0.344 Sum_probs=70.0
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC--CCcEEEEEecCHHHHHHHHHHhcCCee-CCeEEEEEeccC
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV--GKGCGFVQFANRKDAEVALQKLQGTAI-GKQTVRLSWGHN 135 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~--~~g~~~v~f~~~~~a~~a~~~l~~~~~-~g~~l~v~~~~~ 135 (155)
.+++++|||+|||..+++++|+++|++||.|..+.+.. ++++|||+|.+.++|..|+..|+|..+ .|++|+|+|+++
T Consensus 7 ~pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~ 86 (88)
T d2adca2 7 FPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKS 86 (88)
T ss_dssp CCSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSS
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCC
Confidence 35678999999999999999999999999998776553 578999999999999999999999988 589999999976
Q ss_pred C
Q 038175 136 P 136 (155)
Q Consensus 136 ~ 136 (155)
+
T Consensus 87 ~ 87 (88)
T d2adca2 87 T 87 (88)
T ss_dssp C
T ss_pred C
Confidence 4
No 37
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1e-20 Score=112.25 Aligned_cols=73 Identities=21% Similarity=0.323 Sum_probs=67.7
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCC
Q 038175 63 ATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNP 136 (155)
Q Consensus 63 ~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~ 136 (155)
.+|||+|||..+++++|+++|++||.|..+.+.. .|+|||+|.+.++|+.|+..|+|..+.|+.|+|.+++..
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~-~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR-DGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 73 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECT-TSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhcccccccccc-cceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecC
Confidence 3699999999999999999999999999999875 499999999999999999999999999999999887643
No 38
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=7.1e-20 Score=108.13 Aligned_cols=72 Identities=26% Similarity=0.532 Sum_probs=66.7
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC---------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccC
Q 038175 65 IFVGALDSNVSDKDLRELFSHFGEILSVKIPV---------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHN 135 (155)
Q Consensus 65 l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~---------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 135 (155)
|||+|||.++++++|+++|++||.|..+.+.. ++|+|||+|.+.++|+.|++.|+|..++|+.|+|+|++.
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 79999999999999999999999999998864 257999999999999999999999999999999999864
Q ss_pred C
Q 038175 136 P 136 (155)
Q Consensus 136 ~ 136 (155)
.
T Consensus 81 ~ 81 (85)
T d2cpfa1 81 A 81 (85)
T ss_dssp S
T ss_pred C
Confidence 3
No 39
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=1.5e-19 Score=109.28 Aligned_cols=78 Identities=23% Similarity=0.466 Sum_probs=72.7
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCC--eEEEEEeccCC
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGK--QTVRLSWGHNP 136 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g--~~l~v~~~~~~ 136 (155)
..+.++|||+|||.++++++|+++|++||.|..+++.+++++|||+|.+.++|+.|++.|++..+.| ++|+|.|+++.
T Consensus 14 ~~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~ 93 (97)
T d1whya_ 14 ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSG 93 (97)
T ss_dssp CCCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCC
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeeccccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCC
Confidence 4567899999999999999999999999999999999999999999999999999999999999976 58999999753
No 40
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=6.1e-20 Score=108.38 Aligned_cols=75 Identities=20% Similarity=0.480 Sum_probs=69.7
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCC
Q 038175 63 ATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNP 136 (155)
Q Consensus 63 ~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~ 136 (155)
.+|||+|||..+++++|+++|++||.|..+++.. ++|+|||+|.+.++|+.|+..|+|..++|++|+|.|+.+.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 3699999999999999999999999999999875 3699999999999999999999999999999999999764
Q ss_pred C
Q 038175 137 G 137 (155)
Q Consensus 137 ~ 137 (155)
.
T Consensus 82 ~ 82 (85)
T d2u2fa_ 82 A 82 (85)
T ss_dssp C
T ss_pred C
Confidence 3
No 41
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.81 E-value=1.3e-19 Score=106.92 Aligned_cols=75 Identities=21% Similarity=0.474 Sum_probs=68.3
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCCeeCC--eEEEE
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG------KGCGFVQFANRKDAEVALQKLQGTAIGK--QTVRL 130 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~------~g~~~v~f~~~~~a~~a~~~l~~~~~~g--~~l~v 130 (155)
....++|||+|||..+++++|+++|++||.|..++++++ +|+|||+|.+.++|..|++.|||..+.| ++|+|
T Consensus 3 ~~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V 82 (85)
T d1b7fa2 3 SIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 82 (85)
T ss_dssp TTTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEE
Confidence 456678999999999999999999999999999998752 5899999999999999999999999876 88999
Q ss_pred Eec
Q 038175 131 SWG 133 (155)
Q Consensus 131 ~~~ 133 (155)
+||
T Consensus 83 ~~A 85 (85)
T d1b7fa2 83 RLA 85 (85)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
No 42
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=1.2e-19 Score=109.82 Aligned_cols=82 Identities=21% Similarity=0.323 Sum_probs=74.2
Q ss_pred CCCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccC
Q 038175 56 SDGKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHN 135 (155)
Q Consensus 56 ~~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 135 (155)
++......+|||+|||..+++++|+++|++||.|..+.+.. +|+|||+|.+.++|+.|++.|||..+.|+.|+|.|.+.
T Consensus 9 p~~~~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~ 87 (98)
T d1wg4a_ 9 PPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 87 (98)
T ss_dssp CCCCSCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEE
T ss_pred CCCCCCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEec
Confidence 44456678899999999999999999999999999999875 59999999999999999999999999999999999876
Q ss_pred CCC
Q 038175 136 PGN 138 (155)
Q Consensus 136 ~~~ 138 (155)
...
T Consensus 88 ~~~ 90 (98)
T d1wg4a_ 88 YPE 90 (98)
T ss_dssp ECC
T ss_pred CCC
Confidence 543
No 43
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.80 E-value=6.4e-20 Score=110.71 Aligned_cols=82 Identities=27% Similarity=0.424 Sum_probs=73.0
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEee-CCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCC
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIP-VGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNP 136 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~-~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~ 136 (155)
.....++|||+|||.++++++|+++|++||.|..+... ..+++|||+|.+.++|+.|++.|+|..+.|+.|+|.|+.++
T Consensus 12 ~~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k 91 (96)
T d1fjca_ 12 KVRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEK 91 (96)
T ss_dssp TTTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSS
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCC
Confidence 34567899999999999999999999999998777544 34799999999999999999999999999999999999876
Q ss_pred CCC
Q 038175 137 GNK 139 (155)
Q Consensus 137 ~~~ 139 (155)
...
T Consensus 92 ~~~ 94 (96)
T d1fjca_ 92 GGT 94 (96)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 44
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.8e-19 Score=106.37 Aligned_cols=74 Identities=30% Similarity=0.657 Sum_probs=67.0
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCCeeCC--eEEEEE
Q 038175 60 SNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG------KGCGFVQFANRKDAEVALQKLQGTAIGK--QTVRLS 131 (155)
Q Consensus 60 ~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~------~g~~~v~f~~~~~a~~a~~~l~~~~~~g--~~l~v~ 131 (155)
...++|||+|||..+++++|+++|++||.|..++++.+ +|+|||+|.+.++|+.|++.|||..+.| ++|+|+
T Consensus 4 ~k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~ 83 (85)
T d1fxla2 4 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 83 (85)
T ss_dssp GTTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEE
Confidence 34678999999999999999999999999999998642 5799999999999999999999999987 569999
Q ss_pred ec
Q 038175 132 WG 133 (155)
Q Consensus 132 ~~ 133 (155)
||
T Consensus 84 ~A 85 (85)
T d1fxla2 84 FA 85 (85)
T ss_dssp EC
T ss_pred eC
Confidence 86
No 45
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.7e-19 Score=109.76 Aligned_cols=82 Identities=23% Similarity=0.408 Sum_probs=71.0
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEE--------EEeeC------CCcEEEEEecCHHHHHHHHHHhcCCe
Q 038175 57 DGKSNNATIFVGALDSNVSDKDLRELFSHFGEILS--------VKIPV------GKGCGFVQFANRKDAEVALQKLQGTA 122 (155)
Q Consensus 57 ~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~--------~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~ 122 (155)
.......+|||+|||..+++++|+++|.+||.|.. +.+.. .+++|||+|.+.++|..|++.|+|..
T Consensus 3 ~~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~ 82 (101)
T d2cpea1 3 DEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKD 82 (101)
T ss_dssp CCCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCE
T ss_pred CCCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCE
Confidence 45677899999999999999999999999998753 23222 25899999999999999999999999
Q ss_pred eCCeEEEEEeccCCCC
Q 038175 123 IGKQTVRLSWGHNPGN 138 (155)
Q Consensus 123 ~~g~~l~v~~~~~~~~ 138 (155)
+.|+.|+|++++++..
T Consensus 83 ~~gr~i~V~~a~~~~p 98 (101)
T d2cpea1 83 FQGSKLKVSLARKKPP 98 (101)
T ss_dssp ETTEECEEECSSCCCC
T ss_pred ECCEEEEEEEcCCCCC
Confidence 9999999999987543
No 46
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=2.9e-19 Score=104.99 Aligned_cols=71 Identities=32% Similarity=0.525 Sum_probs=65.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEE
Q 038175 60 SNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG------KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRL 130 (155)
Q Consensus 60 ~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~------~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v 130 (155)
.+.++|||+|||..+++++|+++|++||.|..+.+..+ +|+|||+|.+.++|+.|+..|+|..++|+.|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 45789999999999999999999999999999988642 579999999999999999999999999999987
No 47
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.9e-19 Score=105.77 Aligned_cols=74 Identities=31% Similarity=0.600 Sum_probs=66.2
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEEE-EeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCCC
Q 038175 65 IFVGALDSNVSDKDLRELFSHFGEILSV-KIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNPG 137 (155)
Q Consensus 65 l~v~~l~~~~~~~~l~~~f~~~g~v~~~-~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~ 137 (155)
|||+|||.++++++|+++|++||.|..+ ++.+ ++|+|||+|.+.++|+.|++.|+|..+.|++|+|+|+.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999998553 5543 36899999999999999999999999999999999998654
Q ss_pred C
Q 038175 138 N 138 (155)
Q Consensus 138 ~ 138 (155)
.
T Consensus 81 ~ 81 (83)
T d1x5ta1 81 S 81 (83)
T ss_dssp C
T ss_pred c
Confidence 3
No 48
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.6e-19 Score=107.24 Aligned_cols=78 Identities=28% Similarity=0.486 Sum_probs=69.9
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC-CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccCCCC
Q 038175 60 SNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV-GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHNPGN 138 (155)
Q Consensus 60 ~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~-~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~~~~ 138 (155)
...++|||+|||..+++++|+++|++||.|..+++.. .+++|||+|.+.++|+.|+. ++..+.|+.|+|.+++++..
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~ 80 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHN 80 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCC
Confidence 4678999999999999999999999999999998765 58999999999999999985 78889999999999976543
Q ss_pred C
Q 038175 139 K 139 (155)
Q Consensus 139 ~ 139 (155)
.
T Consensus 81 ~ 81 (88)
T d1wf0a_ 81 S 81 (88)
T ss_dssp C
T ss_pred C
Confidence 3
No 49
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.79 E-value=2.5e-19 Score=105.96 Aligned_cols=75 Identities=29% Similarity=0.565 Sum_probs=67.2
Q ss_pred CCCcEEEEcCCCCCCC-HHHHHHHhhccCCeEEEEeeC-------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEE
Q 038175 60 SNNATIFVGALDSNVS-DKDLRELFSHFGEILSVKIPV-------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLS 131 (155)
Q Consensus 60 ~~~~~l~v~~l~~~~~-~~~l~~~f~~~g~v~~~~~~~-------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 131 (155)
...++|||+|||.+++ +++|+++|++||.|..+++.. .+|+|||+|.+.++|+.|++ |+|..++|+.|+|+
T Consensus 2 ~e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~ 80 (86)
T d2ghpa3 2 LEGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVS 80 (86)
T ss_dssp CTTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEE
T ss_pred CCCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEE
Confidence 4578999999999875 667999999999999998854 36899999999999999996 99999999999999
Q ss_pred eccC
Q 038175 132 WGHN 135 (155)
Q Consensus 132 ~~~~ 135 (155)
++++
T Consensus 81 ~a~~ 84 (86)
T d2ghpa3 81 LADK 84 (86)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 9875
No 50
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=4.4e-19 Score=105.95 Aligned_cols=77 Identities=27% Similarity=0.556 Sum_probs=69.8
Q ss_pred CCcEEEEcCCCCCCCHHHHHH----HhhccCCeEEEEeeC---CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 038175 61 NNATIFVGALDSNVSDKDLRE----LFSHFGEILSVKIPV---GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWG 133 (155)
Q Consensus 61 ~~~~l~v~~l~~~~~~~~l~~----~f~~~g~v~~~~~~~---~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 133 (155)
++++|||+|||..+++++|++ +|++||.|..+.+.+ .+|+|||+|.+.++|..|++.++|..+.|+.|+|+|+
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~a 81 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYA 81 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 468999999999999998864 589999999998865 3799999999999999999999999999999999999
Q ss_pred cCCC
Q 038175 134 HNPG 137 (155)
Q Consensus 134 ~~~~ 137 (155)
+++.
T Consensus 82 k~~~ 85 (91)
T d1nu4a_ 82 KTDS 85 (91)
T ss_dssp SSCC
T ss_pred CCCc
Confidence 8653
No 51
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=9.5e-19 Score=104.14 Aligned_cols=78 Identities=24% Similarity=0.409 Sum_probs=69.2
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEE
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG------KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLS 131 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~------~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 131 (155)
......+|||+|||.++++++|+++|++||.|..++++.+ +|+|||+|.+.++|++|++. +..++|+.|.|+
T Consensus 4 ~~~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~ 81 (90)
T d2cqga1 4 AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCK 81 (90)
T ss_dssp CCCCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEE
T ss_pred CCcCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEE
Confidence 3456789999999999999999999999999999998752 68999999999999999985 447999999999
Q ss_pred eccCCC
Q 038175 132 WGHNPG 137 (155)
Q Consensus 132 ~~~~~~ 137 (155)
++.++.
T Consensus 82 ~a~~k~ 87 (90)
T d2cqga1 82 LPNSKQ 87 (90)
T ss_dssp CCCTTC
T ss_pred eCCCCC
Confidence 997754
No 52
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=5.7e-19 Score=107.63 Aligned_cols=76 Identities=18% Similarity=0.423 Sum_probs=69.3
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccC
Q 038175 62 NATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHN 135 (155)
Q Consensus 62 ~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 135 (155)
.++|||+|||.++++++|+++|++||.|..+.++. .+|||||+|.+.++|++|+. +++..+.|+.|.|+++.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 47899999999999999999999999999999865 37999999999999999996 799999999999999886
Q ss_pred CCC
Q 038175 136 PGN 138 (155)
Q Consensus 136 ~~~ 138 (155)
+..
T Consensus 99 ke~ 101 (103)
T d1x4ba1 99 REE 101 (103)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
No 53
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=1.3e-18 Score=105.24 Aligned_cols=79 Identities=22% Similarity=0.494 Sum_probs=70.5
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhc------CCeeCC
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQ------GTAIGK 125 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~------~~~~~g 125 (155)
.....++|||+|||..+++++|+++|++||.|..+.+.. ++|+|||+|.+.++|..|++.|+ |..+.|
T Consensus 4 ~~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~g 83 (98)
T d1x4ha1 4 DVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDG 83 (98)
T ss_dssp CCCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSS
T ss_pred CCCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECC
Confidence 455678999999999999999999999999999888764 36899999999999999999886 567899
Q ss_pred eEEEEEeccCC
Q 038175 126 QTVRLSWGHNP 136 (155)
Q Consensus 126 ~~l~v~~~~~~ 136 (155)
+.|+|+|+.++
T Consensus 84 r~l~v~~a~~k 94 (98)
T d1x4ha1 84 RQLKVDLAVTR 94 (98)
T ss_dssp CEEEEECCCCC
T ss_pred EEEEEEECCCC
Confidence 99999999764
No 54
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=1.2e-18 Score=103.58 Aligned_cols=79 Identities=16% Similarity=0.180 Sum_probs=72.4
Q ss_pred CCCCCcEEEEcCCCCC-CCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHh--cCCeeCCeEEEEEecc
Q 038175 58 GKSNNATIFVGALDSN-VSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKL--QGTAIGKQTVRLSWGH 134 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~-~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l--~~~~~~g~~l~v~~~~ 134 (155)
.....++|||+|||.. +++++|.++|++||.|..+.+.+++++|||+|++.++|..|++.| ++..+.|++|+|+|++
T Consensus 4 ~~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~ 83 (89)
T d1x4da1 4 RVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQ 83 (89)
T ss_dssp CCCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEEC
T ss_pred CCCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeeccceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECC
Confidence 4567899999999986 889999999999999999999999999999999999999999966 6778999999999997
Q ss_pred CC
Q 038175 135 NP 136 (155)
Q Consensus 135 ~~ 136 (155)
+.
T Consensus 84 ~~ 85 (89)
T d1x4da1 84 KY 85 (89)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 55
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.7e-19 Score=109.48 Aligned_cols=77 Identities=22% Similarity=0.530 Sum_probs=70.4
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 038175 61 NNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG------KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGH 134 (155)
Q Consensus 61 ~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~------~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~ 134 (155)
..++|||+|||..+++++|+++|++||.|..+++..+ +|+|||+|.+.++|+.|++.|+|..+.|+.|+|.|+.
T Consensus 7 ~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~ 86 (104)
T d1p1ta_ 7 SLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAA 86 (104)
T ss_dssp HHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETT
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 3468999999999999999999999999999988642 5799999999999999999999999999999999987
Q ss_pred CCC
Q 038175 135 NPG 137 (155)
Q Consensus 135 ~~~ 137 (155)
++.
T Consensus 87 ~~~ 89 (104)
T d1p1ta_ 87 SEK 89 (104)
T ss_dssp CTT
T ss_pred CCC
Confidence 653
No 56
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.3e-18 Score=102.35 Aligned_cols=76 Identities=20% Similarity=0.427 Sum_probs=68.3
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC------CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG------KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~------~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
....++|||+|||..+++++|+++|++||.|..+.+..+ +|+|||+|.+.++|++|++ +++..+.|+.|+|..
T Consensus 3 pe~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~ 81 (84)
T d1l3ka1 3 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKR 81 (84)
T ss_dssp CGGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEE
T ss_pred CCCCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEe
Confidence 345689999999999999999999999999999988642 6899999999999999997 689999999999988
Q ss_pred ccC
Q 038175 133 GHN 135 (155)
Q Consensus 133 ~~~ 135 (155)
|.+
T Consensus 82 A~s 84 (84)
T d1l3ka1 82 AVS 84 (84)
T ss_dssp CCC
T ss_pred eeC
Confidence 753
No 57
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.4e-19 Score=110.36 Aligned_cols=80 Identities=25% Similarity=0.424 Sum_probs=71.3
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
..++++|||+|||..+++++|+++|++||.|..+.+.. .+++|||+|.+.++|+.|++.|+|..+.|+.|+|+|
T Consensus 15 ~~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ 94 (102)
T d2cpxa1 15 GEPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEF 94 (102)
T ss_dssp CSCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEe
Confidence 44678999999999999999999999999887765542 479999999999999999999999999999999999
Q ss_pred ccCCCC
Q 038175 133 GHNPGN 138 (155)
Q Consensus 133 ~~~~~~ 138 (155)
++++..
T Consensus 95 ak~k~~ 100 (102)
T d2cpxa1 95 GKNKKQ 100 (102)
T ss_dssp CCCCSC
T ss_pred CCCccc
Confidence 987544
No 58
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=3.1e-18 Score=104.69 Aligned_cols=80 Identities=28% Similarity=0.527 Sum_probs=67.8
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC-------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEE
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV-------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLS 131 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~-------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 131 (155)
..+..+|||+|||..+++++|+++|+.|| +..+.+.. .+|+|||+|.+.++|++|+ .|++..+.|+.|+|.
T Consensus 12 ~~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~ 89 (104)
T d1wi8a_ 12 KSPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVD 89 (104)
T ss_dssp SSSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEE
Confidence 44568999999999999999999999998 66666543 2589999999999998776 599999999999999
Q ss_pred eccCCCCCC
Q 038175 132 WGHNPGNKQ 140 (155)
Q Consensus 132 ~~~~~~~~~ 140 (155)
|+++...+.
T Consensus 90 ~a~~~~~~~ 98 (104)
T d1wi8a_ 90 VADQAQDKD 98 (104)
T ss_dssp ECCCCCCCC
T ss_pred ECCCCCCCC
Confidence 997764433
No 59
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=7.3e-19 Score=106.50 Aligned_cols=79 Identities=16% Similarity=0.211 Sum_probs=71.4
Q ss_pred CCCCCcEEEEcCCCCC-CCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHH--HhcCCeeCCeEEEEEecc
Q 038175 58 GKSNNATIFVGALDSN-VSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQ--KLQGTAIGKQTVRLSWGH 134 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~-~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~--~l~~~~~~g~~l~v~~~~ 134 (155)
....+++|||+|||.. +++++|.++|++||.|..+.+.+++++|||+|.+.++|..|++ .+++..+.|+.|+|+|++
T Consensus 14 ~~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~ 93 (99)
T d1x4fa1 14 KQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSE 93 (99)
T ss_dssp SSCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEEC
T ss_pred CCCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcC
Confidence 3456789999999985 8999999999999999999999999999999999999999997 467888999999999996
Q ss_pred CC
Q 038175 135 NP 136 (155)
Q Consensus 135 ~~ 136 (155)
..
T Consensus 94 ~~ 95 (99)
T d1x4fa1 94 KY 95 (99)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 60
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=1.1e-18 Score=106.55 Aligned_cols=81 Identities=15% Similarity=0.160 Sum_probs=72.5
Q ss_pred CCCcEEEEcCCCCCC-CH----HHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 038175 60 SNNATIFVGALDSNV-SD----KDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGH 134 (155)
Q Consensus 60 ~~~~~l~v~~l~~~~-~~----~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~ 134 (155)
....+|||+||+..+ ++ ++|+.+|++||.|..+++.+++++|||+|.+.++|..|+..|||..+.|+.|+|.|++
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~ 82 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQ 82 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecc
Confidence 467899999999875 33 5688999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCC
Q 038175 135 NPGNKQ 140 (155)
Q Consensus 135 ~~~~~~ 140 (155)
+.....
T Consensus 83 ~~~~~~ 88 (104)
T d1weya_ 83 TLHIGS 88 (104)
T ss_dssp CSSCCS
T ss_pred cCCCCC
Confidence 754433
No 61
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=2.1e-18 Score=100.31 Aligned_cols=71 Identities=20% Similarity=0.450 Sum_probs=65.2
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 038175 62 NATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWG 133 (155)
Q Consensus 62 ~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 133 (155)
.++|||+|||.++++++|+++|++||.+..+.+.. ++|+|||+|.+.+++++|++ ++|..++|+.|+|+.|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 57999999999999999999999999999998864 26899999999999999996 7999999999999865
No 62
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=4.3e-19 Score=107.95 Aligned_cols=78 Identities=15% Similarity=0.396 Sum_probs=69.7
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC-----CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG-----KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~-----~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
.....++|||+|||.++++++|+++|++||.|..+.+..+ +|+|||+|.+.++|+.|++.|||..+.|+++.|.+
T Consensus 14 ~~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~ 93 (101)
T d1x5oa1 14 QEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAP 93 (101)
T ss_dssp CCCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCC
T ss_pred ccCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCC
Confidence 3456689999999999999999999999999998877642 68999999999999999999999999999988877
Q ss_pred ccC
Q 038175 133 GHN 135 (155)
Q Consensus 133 ~~~ 135 (155)
+++
T Consensus 94 ~~P 96 (101)
T d1x5oa1 94 TEP 96 (101)
T ss_dssp SSC
T ss_pred CCC
Confidence 654
No 63
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.9e-18 Score=106.29 Aligned_cols=79 Identities=25% Similarity=0.308 Sum_probs=70.9
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC--CCcEEEEEecCHHHHHHHHHHhcCCee--CCeEEEEEecc
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV--GKGCGFVQFANRKDAEVALQKLQGTAI--GKQTVRLSWGH 134 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~--~~g~~~v~f~~~~~a~~a~~~l~~~~~--~g~~l~v~~~~ 134 (155)
.....+|||+|||..+++++|+++|++||.|..+.+.. ++|+|||+|.+.++|+.|+..|+|..+ .++.|+|.|++
T Consensus 4 ~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~ 83 (108)
T d2adba1 4 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSK 83 (108)
T ss_dssp CCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECS
T ss_pred CCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecC
Confidence 44567899999999999999999999999999988864 578999999999999999999999988 57899999997
Q ss_pred CCC
Q 038175 135 NPG 137 (155)
Q Consensus 135 ~~~ 137 (155)
+..
T Consensus 84 ~~~ 86 (108)
T d2adba1 84 LTS 86 (108)
T ss_dssp SCS
T ss_pred Ccc
Confidence 654
No 64
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.4e-18 Score=105.49 Aligned_cols=73 Identities=23% Similarity=0.438 Sum_probs=67.9
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEeccC
Q 038175 62 NATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGHN 135 (155)
Q Consensus 62 ~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~~ 135 (155)
.++|||+|||..+++++|+++|+.||.|..+++.. ++|+|||+|.+.++|++|+. |+|..+.|+.|+|+++++
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECCC
Confidence 47899999999999999999999999999999875 37899999999999999996 999999999999999864
No 65
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.76 E-value=2.3e-19 Score=107.14 Aligned_cols=77 Identities=22% Similarity=0.355 Sum_probs=68.3
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEee-----CCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIP-----VGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~-----~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
......+|||+|||..+++++|+++|++||.|..+.+. +++|+|||+|.+.++|+.|++ |+|..++|++|+|.+
T Consensus 9 ~~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ 87 (91)
T d1fjeb1 9 ESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEK 87 (91)
T ss_dssp SCSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEEC
T ss_pred CCCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEe
Confidence 34466799999999999999999999999987766553 358999999999999999996 999999999999999
Q ss_pred ccC
Q 038175 133 GHN 135 (155)
Q Consensus 133 ~~~ 135 (155)
+++
T Consensus 88 ak~ 90 (91)
T d1fjeb1 88 PKG 90 (91)
T ss_dssp CCC
T ss_pred cCC
Confidence 875
No 66
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.9e-18 Score=99.49 Aligned_cols=69 Identities=23% Similarity=0.574 Sum_probs=63.4
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 038175 64 TIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWG 133 (155)
Q Consensus 64 ~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 133 (155)
+|||+|||.++++++|+++|++||.|..+.++. ++|+|||+|.+.++|+.|++ +++..+.|+.|+|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 589999999999999999999999999999875 36999999999999999997 7999999999998643
No 67
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=7.1e-19 Score=101.77 Aligned_cols=70 Identities=24% Similarity=0.502 Sum_probs=64.9
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 038175 63 ATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWG 133 (155)
Q Consensus 63 ~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 133 (155)
++|||+|||.++++++|+++|++||.|..+.++. ++|+|||+|.+.++|++|++ +++..++|+.|+|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 5799999999999999999999999999998865 37999999999999999997 6999999999999875
No 68
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.3e-18 Score=103.46 Aligned_cols=73 Identities=25% Similarity=0.423 Sum_probs=66.1
Q ss_pred CCCCcEEEEcCCCCCCCHHHH---HHHhhccCCeEEEEeeCC---------CcEEEEEecCHHHHHHHHHHhcCCeeCCe
Q 038175 59 KSNNATIFVGALDSNVSDKDL---RELFSHFGEILSVKIPVG---------KGCGFVQFANRKDAEVALQKLQGTAIGKQ 126 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l---~~~f~~~g~v~~~~~~~~---------~g~~~v~f~~~~~a~~a~~~l~~~~~~g~ 126 (155)
....++|||+|||..+++++| +++|++||.|..+.+.++ .++|||+|.+.++|..|++.|||..++|+
T Consensus 5 viq~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr 84 (89)
T d2cpia1 5 VVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGR 84 (89)
T ss_dssp CCCSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTE
T ss_pred EEecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCE
Confidence 346778999999999999999 678999999999998753 37899999999999999999999999999
Q ss_pred EEEEE
Q 038175 127 TVRLS 131 (155)
Q Consensus 127 ~l~v~ 131 (155)
.|+|+
T Consensus 85 ~lkvS 89 (89)
T d2cpia1 85 TLKAS 89 (89)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99986
No 69
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=3.2e-18 Score=103.10 Aligned_cols=76 Identities=20% Similarity=0.414 Sum_probs=67.0
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCC-eEEEEeeC-------CCcEEEEEecCHHHHHHHHHHhcCC--eeCCeEEEEE
Q 038175 62 NATIFVGALDSNVSDKDLRELFSHFGE-ILSVKIPV-------GKGCGFVQFANRKDAEVALQKLQGT--AIGKQTVRLS 131 (155)
Q Consensus 62 ~~~l~v~~l~~~~~~~~l~~~f~~~g~-v~~~~~~~-------~~g~~~v~f~~~~~a~~a~~~l~~~--~~~g~~l~v~ 131 (155)
+++|||+|||..+++++|+++|++||. |..+.+.+ ++|+|||+|.+.++|..|++.|++. .++|+.|+|.
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 468999999999999999999999995 88898864 3689999999999999999998654 5689999999
Q ss_pred eccCCC
Q 038175 132 WGHNPG 137 (155)
Q Consensus 132 ~~~~~~ 137 (155)
|+++..
T Consensus 81 ~A~p~~ 86 (96)
T d2disa1 81 WAEPEI 86 (96)
T ss_dssp ESCSSC
T ss_pred EcCCCC
Confidence 997643
No 70
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.5e-18 Score=99.95 Aligned_cols=69 Identities=26% Similarity=0.463 Sum_probs=63.7
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 038175 64 TIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWG 133 (155)
Q Consensus 64 ~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 133 (155)
+|||+|||.++++++|+++|++||.+..+.+.. .+++|||+|.+.++|++|++ ++|..++|++|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 589999999999999999999999999987754 36899999999999999997 8999999999999875
No 71
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.75 E-value=5.1e-18 Score=97.60 Aligned_cols=70 Identities=20% Similarity=0.315 Sum_probs=64.6
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC----CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 038175 63 ATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG----KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWG 133 (155)
Q Consensus 63 ~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~----~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 133 (155)
.+|||+|||.++++++|+++|+++|.|..+++..+ +++|||+|++.++|++|+. +++..++|+.|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 47999999999999999999999999999998753 5799999999999999996 8999999999999865
No 72
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=7.4e-18 Score=99.24 Aligned_cols=73 Identities=16% Similarity=0.379 Sum_probs=67.2
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC-----CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 038175 61 NNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG-----KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGH 134 (155)
Q Consensus 61 ~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~-----~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~ 134 (155)
..++|||+|||.++++++|+++|+.||.|..+.+..+ +|+|||+|.+.++|++|++ +++..+.|+.|.|.|.+
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 3679999999999999999999999999999998753 5899999999999999996 69999999999999864
No 73
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=2.4e-17 Score=100.64 Aligned_cols=83 Identities=23% Similarity=0.334 Sum_probs=69.9
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEE-eeC-----CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEE
Q 038175 57 DGKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVK-IPV-----GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRL 130 (155)
Q Consensus 57 ~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~-~~~-----~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v 130 (155)
+......+|||+|||.++++++|+++|..+|.+.... +.. .+|+|||+|.+.++|++|++ +++..|+|+.|+|
T Consensus 10 ~~~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V 88 (104)
T d1wg5a_ 10 PDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEI 88 (104)
T ss_dssp SSCSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEE
T ss_pred CCCCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEE
Confidence 3455667899999999999999999999999887643 332 36999999999999999996 8999999999999
Q ss_pred EeccCCCCCC
Q 038175 131 SWGHNPGNKQ 140 (155)
Q Consensus 131 ~~~~~~~~~~ 140 (155)
.+++....+.
T Consensus 89 ~~~~~~~~~~ 98 (104)
T d1wg5a_ 89 FKSSRAEVRT 98 (104)
T ss_dssp EEECTTTSCC
T ss_pred EECCHHHhcc
Confidence 9997664433
No 74
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.8e-18 Score=98.08 Aligned_cols=69 Identities=26% Similarity=0.595 Sum_probs=63.0
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 038175 64 TIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWG 133 (155)
Q Consensus 64 ~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 133 (155)
+|||+|||.++++++|+++|++||.|..++++. ++|+|||+|.+.++|++|++. ++..++|+.|+|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~-~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK-KYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC-SSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhh-CCCEECCEEeEEEEC
Confidence 589999999999999999999999999999875 379999999999999999974 777899999999864
No 75
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=1.1e-17 Score=98.71 Aligned_cols=75 Identities=27% Similarity=0.385 Sum_probs=65.7
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEE-EEeeC-----CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILS-VKIPV-----GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~-~~~~~-----~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
.+...+|||+|||.++++++|+++|+.||.+.. +.+.. .+|+|||+|.+.++|++|+..||+..+.|++|+|++
T Consensus 6 ~p~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l 85 (86)
T d2cqpa1 6 KPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVL 85 (86)
T ss_dssp CCSSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEE
Confidence 455678999999999999999999999998754 33332 268999999999999999999999999999999987
Q ss_pred c
Q 038175 133 G 133 (155)
Q Consensus 133 ~ 133 (155)
+
T Consensus 86 ~ 86 (86)
T d2cqpa1 86 G 86 (86)
T ss_dssp S
T ss_pred C
Confidence 5
No 76
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=2.5e-17 Score=100.17 Aligned_cols=79 Identities=20% Similarity=0.331 Sum_probs=67.5
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC-----CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 58 GKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV-----GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 58 ~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~-----~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
......+|||+|||.++++++|+++|..+|.+ .+.+.. .+|+|||+|.+.++|+.|++ +++..|+|+.|+|.+
T Consensus 11 ~~~~~~~v~v~nLp~~~te~dl~~~F~~~~~~-~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~ 88 (102)
T d1weza_ 11 QSTTGHCVHMRGLPYRATENDIYNFFSPLNPM-RVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFL 88 (102)
T ss_dssp CCSSSCEEEEESCCTTCCHHHHHHSSCSCCCS-EEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEE
T ss_pred cCCCCCEEEEeCCCCcCCHHHHHHHHhccCcc-eeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 45667899999999999999999999999854 455443 26899999999999999986 899999999999999
Q ss_pred ccCCCC
Q 038175 133 GHNPGN 138 (155)
Q Consensus 133 ~~~~~~ 138 (155)
+.....
T Consensus 89 s~~~~~ 94 (102)
T d1weza_ 89 NSTAGT 94 (102)
T ss_dssp ECCCCC
T ss_pred cCCCCC
Confidence 876543
No 77
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=4.9e-18 Score=97.00 Aligned_cols=65 Identities=29% Similarity=0.560 Sum_probs=60.4
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEE
Q 038175 65 IFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVR 129 (155)
Q Consensus 65 l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~ 129 (155)
|||+|||.++++++|+++|++||.|..+++.. .+|+|||+|.+.++|++|++.|||..+.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999998764 369999999999999999999999999998764
No 78
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=2.3e-17 Score=100.55 Aligned_cols=76 Identities=17% Similarity=0.210 Sum_probs=66.2
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEE-EEeeC-----CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILS-VKIPV-----GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~-~~~~~-----~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
.....+|||+|||.++++++|+++|..||.+.. +.+.. .+|+|||+|.+.++|+.|+. +++..|.|+.|.|.+
T Consensus 5 ~~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~ 83 (103)
T d2cpya1 5 NSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHV 83 (103)
T ss_dssp CSCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEE
T ss_pred CCCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEE
Confidence 445678999999999999999999999998865 44432 37999999999999999996 899999999999999
Q ss_pred ccC
Q 038175 133 GHN 135 (155)
Q Consensus 133 ~~~ 135 (155)
+..
T Consensus 84 ~~~ 86 (103)
T d2cpya1 84 VTL 86 (103)
T ss_dssp ECH
T ss_pred CCH
Confidence 754
No 79
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=3.6e-16 Score=94.70 Aligned_cols=67 Identities=18% Similarity=0.341 Sum_probs=61.5
Q ss_pred CCCCCCcEEEEc--CCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCee
Q 038175 57 DGKSNNATIFVG--ALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAI 123 (155)
Q Consensus 57 ~~~~~~~~l~v~--~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~ 123 (155)
....+..+|+|. +||..+++++|+++|++||.|..+.+.+++++|||+|.+.++|..|+..|||..+
T Consensus 13 ~~~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 13 TVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp CCSSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred cCCCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccCccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 344567888894 5999999999999999999999999999999999999999999999999999987
No 80
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=6.3e-16 Score=95.50 Aligned_cols=75 Identities=24% Similarity=0.372 Sum_probs=65.7
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCH-HHHHHHHHHhcCCeeCCeEEEEEecc
Q 038175 60 SNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANR-KDAEVALQKLQGTAIGKQTVRLSWGH 134 (155)
Q Consensus 60 ~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~-~~a~~a~~~l~~~~~~g~~l~v~~~~ 134 (155)
.....+||+|||..+++++|+++|++||.|..+.+++++++|||.|.++ ++|..|+..+++..+.++.+.|.+..
T Consensus 9 ~g~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 9 IGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEV 84 (113)
T ss_dssp CCCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEE
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecCCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEee
Confidence 3445569999999999999999999999999999999999999999986 78999999999998877766666654
No 81
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=8.9e-18 Score=99.97 Aligned_cols=71 Identities=14% Similarity=0.357 Sum_probs=61.8
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEe-----------eCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEE
Q 038175 63 ATIFVGALDSNVSDKDLRELFSHFGEILSVKI-----------PVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLS 131 (155)
Q Consensus 63 ~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~-----------~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~ 131 (155)
++|||+|||..+++++|+++|+++|.+..+.+ .+++|+|||+|.+.++|+.|+. |+|..+.|+.|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 68999999999999999999999987654433 2358999999999999999985 99999999999997
Q ss_pred ecc
Q 038175 132 WGH 134 (155)
Q Consensus 132 ~~~ 134 (155)
.++
T Consensus 81 r~k 83 (90)
T d1u2fa_ 81 RPH 83 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
No 82
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=7.3e-16 Score=95.09 Aligned_cols=76 Identities=18% Similarity=0.309 Sum_probs=64.6
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEE-EeeC-----CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEe
Q 038175 59 KSNNATIFVGALDSNVSDKDLRELFSHFGEILSV-KIPV-----GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSW 132 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~-~~~~-----~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~ 132 (155)
.....+|||+|||..+++++|+++|+.+|.+..+ .+.. .+|+|||+|.+.++|++|+. +||..|+|+.|.|..
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~ 93 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHP 93 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEE
Confidence 4466799999999999999999999999987543 2221 26899999999999999996 899999999999988
Q ss_pred ccC
Q 038175 133 GHN 135 (155)
Q Consensus 133 ~~~ 135 (155)
+..
T Consensus 94 ~~~ 96 (112)
T d1wela1 94 ITK 96 (112)
T ss_dssp ECH
T ss_pred cCh
Confidence 743
No 83
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.56 E-value=6.7e-15 Score=86.33 Aligned_cols=66 Identities=23% Similarity=0.334 Sum_probs=57.0
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|.+|++.+++.......+.|.|
T Consensus 11 V~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V 82 (85)
T d1b7fa2 11 VTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 82 (85)
T ss_dssp EESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEE
T ss_pred EeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEE
Confidence 679999999999999999 677788888899999999999999999999999999655444455555
No 84
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.8e-14 Score=86.77 Aligned_cols=81 Identities=19% Similarity=0.304 Sum_probs=69.0
Q ss_pred CCCCCCCcEEEEcCC--CCCCC---------HHHHHHHhhccCCeEEEEeeCC--CcEEEEEecCHHHHHHHHHHhcCCe
Q 038175 56 SDGKSNNATIFVGAL--DSNVS---------DKDLRELFSHFGEILSVKIPVG--KGCGFVQFANRKDAEVALQKLQGTA 122 (155)
Q Consensus 56 ~~~~~~~~~l~v~~l--~~~~~---------~~~l~~~f~~~g~v~~~~~~~~--~g~~~v~f~~~~~a~~a~~~l~~~~ 122 (155)
+......++|+|.|+ |.++. +++|+..|++||.|..+.+..+ +|+|||+|.+.++|..|+..|||..
T Consensus 2 p~~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~ 81 (99)
T d2dita1 2 PSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRW 81 (99)
T ss_dssp CCCCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCE
T ss_pred CCCCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcE
Confidence 345567899999998 54322 2678899999999999988764 7999999999999999999999999
Q ss_pred eCCeEEEEEeccCC
Q 038175 123 IGKQTVRLSWGHNP 136 (155)
Q Consensus 123 ~~g~~l~v~~~~~~ 136 (155)
+.|++|+|+|..+.
T Consensus 82 ~~gr~i~v~~~~g~ 95 (99)
T d2dita1 82 FGGRQITAQAWDGT 95 (99)
T ss_dssp ETTEECEEEECCSC
T ss_pred ECCEEEEEEEeCCc
Confidence 99999999998654
No 85
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=1.6e-14 Score=83.73 Aligned_cols=73 Identities=15% Similarity=0.215 Sum_probs=63.3
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeE-EEEEeccC
Q 038175 61 NNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQT-VRLSWGHN 135 (155)
Q Consensus 61 ~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~-l~v~~~~~ 135 (155)
+.+.|+|+++|.+.+++.| ++|++||.|..+++.+++++|||+|.++++|++|++ +||..++|+. |.|.....
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~~ 76 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCID 76 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEECSSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECCC
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheEEecCCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCCC
Confidence 3567999999999886555 579999999999999999999999999999999996 8999999975 56877654
No 86
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=1.2e-14 Score=85.19 Aligned_cols=66 Identities=27% Similarity=0.437 Sum_probs=56.1
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|++|+..|+|.........|.|
T Consensus 11 V~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V 82 (85)
T d1fxla2 11 VSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 82 (85)
T ss_dssp EESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEE
T ss_pred EeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEE
Confidence 689999999999999999 667888888899999999999999999999999999654443444443
No 87
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=5.8e-16 Score=94.23 Aligned_cols=70 Identities=17% Similarity=0.228 Sum_probs=63.0
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC-----CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEec
Q 038175 64 TIFVGALDSNVSDKDLRELFSHFGEILSVKIPV-----GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWG 133 (155)
Q Consensus 64 ~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~-----~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~ 133 (155)
.++|.+++..+.+++|+++|++||.|..+.+++ .+|+|||+|.+.++|.+|+..|+|..+.|++|+|+|+
T Consensus 29 ~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 29 DVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred hHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 355677777788999999999999999999975 3699999999999999999999999999999999985
No 88
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=7.7e-15 Score=85.08 Aligned_cols=55 Identities=31% Similarity=0.377 Sum_probs=51.2
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.|||+++||++|+++|+ ++.++.++.++.++|||||+|.+.++|..|++.|+|.
T Consensus 5 V~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~ 65 (80)
T d1cvja1 5 VGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFD 65 (80)
T ss_dssp EESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTC
T ss_pred EeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCC
Confidence 679999999999999998 7788888888999999999999999999999999884
No 89
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.8e-14 Score=81.85 Aligned_cols=54 Identities=24% Similarity=0.358 Sum_probs=48.6
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNG 55 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~ 55 (155)
|.|||.++|+++|+++|+ .+.++.+..++.++|+|||+|.+.++|++|+..|+|
T Consensus 3 V~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng 62 (72)
T d1x4ea1 3 IRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKA 62 (72)
T ss_dssp EESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHH
T ss_pred EeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCC
Confidence 689999999999999999 455666777788999999999999999999999887
No 90
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.49 E-value=1.1e-14 Score=84.79 Aligned_cols=55 Identities=31% Similarity=0.449 Sum_probs=49.5
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|++|+..|++.
T Consensus 7 V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~ 67 (82)
T d1b7fa1 7 VNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGI 67 (82)
T ss_dssp EECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTC
T ss_pred EeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCC
Confidence 679999999999999999 4556667778889999999999999999999999984
No 91
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=2.7e-14 Score=83.29 Aligned_cols=54 Identities=24% Similarity=0.391 Sum_probs=50.0
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNG 55 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~ 55 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|.+|+..|++
T Consensus 14 V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g 73 (83)
T d2cqca1 14 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 73 (83)
T ss_dssp EESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTT
T ss_pred EeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCC
Confidence 689999999999999999 567788888889999999999999999999999987
No 92
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.48 E-value=3.3e-14 Score=83.79 Aligned_cols=64 Identities=25% Similarity=0.379 Sum_probs=54.6
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|++|+..++|... ..++|.|
T Consensus 12 V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l--~g~~l~V 81 (88)
T d1rk8a_ 12 VTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEI--MGQTIQV 81 (88)
T ss_dssp EESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEE--TTEECEE
T ss_pred EeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEE--CCEEEEE
Confidence 679999999999999999 677788888899999999999999999999999998432 3444544
No 93
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=2.6e-14 Score=83.38 Aligned_cols=64 Identities=33% Similarity=0.460 Sum_probs=52.3
Q ss_pred cccCCCCCCHHHHHhhcc------c-ceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------R-AKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~-~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ . +.++.+..++.++|||||+|.+.++|++|++.+++... ..+.|.|
T Consensus 3 V~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~--~gr~l~v 73 (83)
T d1x5ta1 3 IGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYL--CNRPITV 73 (83)
T ss_dssp EECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEE--TTEECEE
T ss_pred EcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEE--CCEEEEE
Confidence 689999999999999999 2 24566677789999999999999999999999988432 3344444
No 94
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=2.4e-14 Score=83.90 Aligned_cols=56 Identities=25% Similarity=0.354 Sum_probs=51.3
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSD 57 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~ 57 (155)
|.|||.++||++|+++|+ ++.++.+..++.++|||||+|.+.++|..|+..+++..
T Consensus 6 V~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~ 67 (85)
T d2u2fa_ 6 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQ 67 (85)
T ss_dssp EETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCC
T ss_pred EECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCE
Confidence 679999999999999999 66777788889999999999999999999999999844
No 95
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=3.8e-14 Score=82.45 Aligned_cols=64 Identities=28% Similarity=0.415 Sum_probs=53.9
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ ++.++.+...+.++|||||+|.+.++|+.|+..|+|..- .++.|.|
T Consensus 7 V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~--~g~~l~v 76 (82)
T d1fxla1 7 VNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL--QTKTIKV 76 (82)
T ss_dssp EESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEE--TTEECEE
T ss_pred EECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEE--CCEEEEE
Confidence 679999999999999999 566777777889999999999999999999999998432 3344444
No 96
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=3.3e-14 Score=84.14 Aligned_cols=62 Identities=29% Similarity=0.353 Sum_probs=52.6
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||+++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|++|++..+ ...++.|.|
T Consensus 13 V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~~----~l~Gr~i~v 80 (90)
T d2cqga1 13 VLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRH----MIDGRWCDC 80 (90)
T ss_dssp EESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSCE----EETTEEEEE
T ss_pred EECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcCC----ccCCEEeEE
Confidence 689999999999999999 67788888889999999999999999999997533 234455555
No 97
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=4.7e-14 Score=83.47 Aligned_cols=55 Identities=29% Similarity=0.471 Sum_probs=50.5
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|.+|++.|++.
T Consensus 13 V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~ 73 (90)
T d2cq0a1 13 VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGF 73 (90)
T ss_dssp EESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTC
T ss_pred EECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCC
Confidence 689999999999999999 6677778788899999999999999999999999883
No 98
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=6.2e-14 Score=83.45 Aligned_cols=64 Identities=20% Similarity=0.203 Sum_probs=54.5
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|..|+..|++... .++.|.|
T Consensus 12 V~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~--~gr~i~V 81 (93)
T d1h2vz_ 12 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRL--DDRIIRT 81 (93)
T ss_dssp EESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEE--TTEECEE
T ss_pred EeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEE--CCEEEEE
Confidence 679999999999999999 677788888899999999999999999999999998432 2344444
No 99
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=3.4e-14 Score=83.96 Aligned_cols=64 Identities=23% Similarity=0.357 Sum_probs=54.2
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|++|+..+++... .++.|.|
T Consensus 10 V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i--~g~~l~v 79 (89)
T d2cqba1 10 VGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESEL--FGRTIRV 79 (89)
T ss_dssp EESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEE--TTEEEEE
T ss_pred EeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEE--CCEEEEE
Confidence 679999999999999999 566777778899999999999999999999999988432 3445555
No 100
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=6.8e-14 Score=84.65 Aligned_cols=64 Identities=28% Similarity=0.349 Sum_probs=54.4
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|+.|+..|++... ..+.|.|
T Consensus 23 V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~--~g~~i~V 92 (102)
T d2cpza1 23 IYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQI--GMKRLKV 92 (102)
T ss_dssp EESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEE--TTEECEE
T ss_pred EeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEE--CCEEEEE
Confidence 679999999999999999 567788888899999999999999999999999998432 2344544
No 101
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44 E-value=6.7e-14 Score=80.62 Aligned_cols=54 Identities=26% Similarity=0.342 Sum_probs=47.2
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.|||+++|+++|+++|+ ++.++.+. ++.++|||||+|.+.++|++|+..+++.
T Consensus 5 V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~ 64 (78)
T d1no8a_ 5 VSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGV 64 (78)
T ss_dssp EESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTC
T ss_pred EECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCC
Confidence 789999999999999999 44444453 6788999999999999999999999984
No 102
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44 E-value=4.9e-14 Score=80.99 Aligned_cols=53 Identities=25% Similarity=0.281 Sum_probs=48.2
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNG 55 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~ 55 (155)
|.|||+++|+++|+++|+ ++.++.++.++.++|||||+|.+.++|++|+. +++
T Consensus 5 V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~ 63 (77)
T d1uawa_ 5 IGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSR 63 (77)
T ss_dssp EESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTT
T ss_pred EeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCC
Confidence 679999999999999999 67788888889999999999999999999996 454
No 103
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=5.2e-14 Score=80.50 Aligned_cols=53 Identities=26% Similarity=0.386 Sum_probs=46.9
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNG 55 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~ 55 (155)
|.|||+++||++|+++|+ ++.++.+..++.++|||||+|.+.++|++|+. +++
T Consensus 4 V~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~ 62 (75)
T d1hd0a_ 4 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKE 62 (75)
T ss_dssp EECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCC
T ss_pred EeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCC
Confidence 689999999999999999 55666777788999999999999999999996 444
No 104
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=4.9e-14 Score=83.92 Aligned_cols=56 Identities=27% Similarity=0.364 Sum_probs=49.9
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSD 57 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~ 57 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|++|+..|++..
T Consensus 14 V~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~ 75 (93)
T d1x5ua1 14 VGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIK 75 (93)
T ss_dssp EECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCB
T ss_pred EeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCE
Confidence 679999999999999999 45556677788999999999999999999999999854
No 105
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43 E-value=6.2e-14 Score=84.40 Aligned_cols=64 Identities=25% Similarity=0.270 Sum_probs=53.4
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|. ++.++.+..++.++|||||+|.+.++|++|+..|++.. ...+.|.|
T Consensus 13 V~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~--~~gr~i~V 82 (99)
T d1whwa_ 13 VRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQV--FQGRMLHV 82 (99)
T ss_dssp EECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEE--SSSCEEEE
T ss_pred EECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCE--ECCEEEEE
Confidence 679999999999999998 45555667788999999999999999999999999843 23455655
No 106
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=2e-13 Score=82.78 Aligned_cols=76 Identities=22% Similarity=0.341 Sum_probs=65.4
Q ss_pred CCCcEEEEcCC--CCCCC--------HHHHHHHhhccCCeEEEEeeCC--------CcEEEEEecCHHHHHHHHHHhcCC
Q 038175 60 SNNATIFVGAL--DSNVS--------DKDLRELFSHFGEILSVKIPVG--------KGCGFVQFANRKDAEVALQKLQGT 121 (155)
Q Consensus 60 ~~~~~l~v~~l--~~~~~--------~~~l~~~f~~~g~v~~~~~~~~--------~g~~~v~f~~~~~a~~a~~~l~~~ 121 (155)
++++.|.+.|+ |..+. .++|+..|++||.|..+.+++. .|++||+|.+.++|.+|+..|+|.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 46788999999 44433 3578999999999999998752 489999999999999999999999
Q ss_pred eeCCeEEEEEeccC
Q 038175 122 AIGKQTVRLSWGHN 135 (155)
Q Consensus 122 ~~~g~~l~v~~~~~ 135 (155)
.++|+.|.+.|...
T Consensus 82 ~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 82 KFANRVVVTKYCDP 95 (104)
T ss_dssp CSSSSCCEEEEECH
T ss_pred EECCeEEEEEEcCH
Confidence 99999999999753
No 107
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.42 E-value=1.9e-13 Score=80.16 Aligned_cols=56 Identities=16% Similarity=0.193 Sum_probs=48.1
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSD 57 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~ 57 (155)
|.|||.++++++|+++|. ....+....++.++|+|||+|.+.++|++|+.++++..
T Consensus 14 v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~ 75 (86)
T d2cqpa1 14 VQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRP 75 (86)
T ss_dssp EESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCE
T ss_pred EECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCE
Confidence 679999999999999998 33344555678999999999999999999999998843
No 108
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=3.4e-14 Score=81.23 Aligned_cols=51 Identities=20% Similarity=0.375 Sum_probs=45.9
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHH
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIE 52 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~ 52 (155)
|.|||+++|+++|+++|+ .+.++.+..++.++|||||+|.+.++|++|++.
T Consensus 4 VgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~ 60 (75)
T d1x0fa1 4 VGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 60 (75)
T ss_dssp EESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC
T ss_pred EcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhh
Confidence 679999999999999999 556667778899999999999999999999854
No 109
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.41 E-value=8.8e-14 Score=80.67 Aligned_cols=55 Identities=5% Similarity=0.089 Sum_probs=42.7
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.|||+++|+++|+++|+ .+.++.+...+.++|||||+|.+.++|++|+..|++.
T Consensus 6 v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~ 66 (81)
T d2ghpa1 6 MTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGL 66 (81)
T ss_dssp EECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTC
T ss_pred EECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCC
Confidence 689999999999999999 2334445566789999999999999999999999984
No 110
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.2e-13 Score=83.83 Aligned_cols=77 Identities=26% Similarity=0.408 Sum_probs=60.6
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEEcCCCCCCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFVGALDSNVS 75 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v~~l~~~~~ 75 (155)
|.|||.++|+++|.++|+ ++.++.+..++.++|||||+|.+.++|++|+..|++... ..+.|.|.--...-.
T Consensus 13 V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~--~g~~i~V~~a~~~~~ 90 (104)
T d1p1ta_ 13 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREF--SGRALRVDNAASEKN 90 (104)
T ss_dssp EESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSC--SSSCBEEEETTCTTH
T ss_pred EECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEE--CCEEEEEEECCCCCC
Confidence 579999999999999998 667788888899999999999999999999999998543 456666653333333
Q ss_pred HHHHH
Q 038175 76 DKDLR 80 (155)
Q Consensus 76 ~~~l~ 80 (155)
.++.+
T Consensus 91 ~~~~~ 95 (104)
T d1p1ta_ 91 KEELK 95 (104)
T ss_dssp HHHHH
T ss_pred ccccc
Confidence 33333
No 111
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.40 E-value=1.3e-13 Score=80.68 Aligned_cols=64 Identities=19% Similarity=0.334 Sum_probs=51.6
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCC---CCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTG---HTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~---~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ ++.++.+..++ .++|||||+|.+.++|.+|+..+++.. ...+.|.|
T Consensus 3 V~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~--~~g~~i~V 75 (85)
T d2cpfa1 3 IKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHT--VDGHKLEV 75 (85)
T ss_dssp EESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCE--ETTEECEE
T ss_pred EcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCE--ECCEEEEE
Confidence 689999999999999999 56666665554 368999999999999999999999843 23445555
No 112
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=2.3e-13 Score=79.39 Aligned_cols=51 Identities=27% Similarity=0.357 Sum_probs=47.2
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHH
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIE 52 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~ 52 (155)
|.|||.++|+++|+++|+ .+.++.+..++.++|||||+|.+.++|++|+..
T Consensus 11 V~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~~ 67 (84)
T d1l3ka1 11 IGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 67 (84)
T ss_dssp EESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT
T ss_pred EECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHHh
Confidence 679999999999999999 667888888999999999999999999999963
No 113
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.40 E-value=1.4e-13 Score=78.68 Aligned_cols=67 Identities=16% Similarity=0.124 Sum_probs=53.0
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEEcCCC
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFVGALD 71 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v~~l~ 71 (155)
|.|||.++++++|+++|..+++.. ...+.++|||||+|.+.++|++|+..|++... .++.|.|.-.+
T Consensus 3 V~nLp~~~t~~~l~~~F~~~g~~~-~~~~~~~g~afv~f~~~~~A~~Ai~~ln~~~~--~g~~l~V~~a~ 69 (75)
T d1wi6a1 3 IRGLPGDVTNQEVHDLLSDYELKY-CFVDKYKGTAFVTLLNGEQAEAAINTFHQSRL--RERELSVQLQP 69 (75)
T ss_dssp EECCCTTCCHHHHHHHTTTSCEEE-EEEETTTTEEEEEESSHHHHHHHHHHHTTEES--SSCEEEEEECC
T ss_pred EeCCCCcCCHHHHHHHHhcccccc-eeecccceeEEEEECCHHHHHHHHHHhCCccC--CCCEEEEEEeC
Confidence 789999999999999999766433 23567899999999999999999999998433 34556654333
No 114
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=1.1e-13 Score=83.79 Aligned_cols=63 Identities=29% Similarity=0.350 Sum_probs=52.5
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|++|++.+++. ...+.|.|
T Consensus 15 V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~~---l~Gr~l~V 83 (103)
T d2cqda1 15 VGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPI---IDGRKANV 83 (103)
T ss_dssp EECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSCE---ETTEECEE
T ss_pred EeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCCc---CCCEEEEE
Confidence 579999999999999999 4556667778899999999999999999999877652 34556655
No 115
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=4e-14 Score=82.00 Aligned_cols=65 Identities=22% Similarity=0.269 Sum_probs=53.0
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|..++.+.......++|||||+|.+.++|++|++.|+|.. ...++.|.|
T Consensus 6 V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~rg~aFV~f~~~~~A~~Ai~~lng~~-~~~G~~i~V 70 (80)
T d2cqha1 6 IGNLSPAVTADDLRQLFGDRKLPLAGQVLLKSGYAFVDYPDQNWAIRAIETLSGKV-ELHGKIMEV 70 (80)
T ss_dssp EECCCTTCCHHHHHHHHHHTTCCCSSCEEEETTEEEECCSCHHHHHHHHHHHTTTC-EETTEECEE
T ss_pred EECCCCCCCHHHHHHHHHHhCcEEEeEEecccceEEEEECCHHHHHHHHHHhCCCe-EECCEEEEE
Confidence 67999999999999999966666555556678999999999999999999999853 234455555
No 116
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=2.3e-13 Score=80.39 Aligned_cols=64 Identities=30% Similarity=0.447 Sum_probs=53.0
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ .+.++.+..++.++|||||+|.+.++|+.|+..|++.. ..++.|.|
T Consensus 10 V~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~--~~g~~l~V 79 (90)
T d1x5sa1 10 VGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKS--VDGRQIRV 79 (90)
T ss_dssp EESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCC--TTSCCCEE
T ss_pred EECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCE--ECCEEEEE
Confidence 679999999999999999 44555666778899999999999999999999999843 33445554
No 117
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=1.7e-13 Score=82.64 Aligned_cols=63 Identities=22% Similarity=0.307 Sum_probs=52.4
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|.+|+. ++|.. ..++.|.|
T Consensus 23 V~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~--~~G~~l~V 91 (101)
T d2cq4a1 23 CMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQR--LLGVPIIV 91 (101)
T ss_dssp EESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEE--ETTEEEEE
T ss_pred EECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCE--ECCEEEEE
Confidence 679999999999999999 46666777789999999999999999999994 88742 23455555
No 118
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.38 E-value=2.1e-13 Score=86.94 Aligned_cols=64 Identities=25% Similarity=0.421 Sum_probs=54.8
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ ++.++.+..++.++|||||+|.+.++|.+|+..|++... ..+.|.|
T Consensus 47 V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~--~gr~l~V 116 (139)
T d1u6fa1 47 VNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNI--LNKRLKV 116 (139)
T ss_dssp EESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEEC--SSCEEEE
T ss_pred EeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEE--CCEEEEE
Confidence 679999999999999999 567788888899999999999999999999999998433 2455555
No 119
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=1.3e-12 Score=86.65 Aligned_cols=75 Identities=20% Similarity=0.432 Sum_probs=65.5
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeC------CCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 038175 61 NNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPV------GKGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGH 134 (155)
Q Consensus 61 ~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~------~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~ 134 (155)
..++|||+|||..+++++|+++|++||.|..+.+.. .+|+|||+|.+.++|..|+. +++..+.++.+.+....
T Consensus 5 ~~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~-~~~~~~~~~~~~~~~~~ 83 (183)
T d1u1qa_ 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (183)
T ss_dssp HHHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHH-hcCCcccccchhhhhhh
Confidence 457999999999999999999999999999998864 26899999999999999998 46677888988888765
Q ss_pred CC
Q 038175 135 NP 136 (155)
Q Consensus 135 ~~ 136 (155)
+.
T Consensus 84 ~~ 85 (183)
T d1u1qa_ 84 SR 85 (183)
T ss_dssp CT
T ss_pred hc
Confidence 44
No 120
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.37 E-value=2.6e-13 Score=80.85 Aligned_cols=65 Identities=17% Similarity=0.302 Sum_probs=51.1
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcC-CCCCCcceEEEEeCCHHHHHHHHHHh-cCCCCCCCCcEEEEc
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDS-NTGHTKGYGFVRFGDENERSRAMIEM-NGSDGKSNNATIFVG 68 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~-~~~~~~g~afv~f~~~~~a~~a~~~~-~~~~~~~~~~~l~v~ 68 (155)
|.|||.++++++|+++|+ .+.++.+. .++.++|||||+|.+.++|.+|+..| ++.. ..++.|.|.
T Consensus 13 V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~--~~Gr~l~V~ 85 (94)
T d2cpha1 13 VRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTH--LYGRRLVLE 85 (94)
T ss_dssp EESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCB--SSSCBCEEE
T ss_pred EeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcE--ECCEEEEEE
Confidence 679999999999999999 34444443 36789999999999999999999998 6633 234556553
No 121
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.37 E-value=4.9e-13 Score=80.14 Aligned_cols=67 Identities=18% Similarity=0.242 Sum_probs=53.7
Q ss_pred cccCCCCCCHHHHHhhccc------ceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC----CCCCCCcEEEEc
Q 038175 2 GYCQVSDITNSILQETFSR------AKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS----DGKSNNATIFVG 68 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~------~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~----~~~~~~~~l~v~ 68 (155)
|.|||.++|+++|+++|.. +.++.+..++.++|||||+|.+.++|.+|+..+++. .....++.|.|.
T Consensus 13 V~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~v~ 89 (98)
T d1x4ha1 13 IRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVD 89 (98)
T ss_dssp EESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEEEEE
T ss_pred EcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEEEEE
Confidence 6799999999999999993 344445566788999999999999999999999863 233456677764
No 122
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=8.3e-13 Score=76.07 Aligned_cols=54 Identities=20% Similarity=0.363 Sum_probs=47.1
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.|||+++|+++|+++|+ .+.++.+..++.++|||||+|.+.++|.+|+. +++.
T Consensus 7 V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~ 66 (79)
T d1l3ka2 7 VGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYH 66 (79)
T ss_dssp EECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCC
T ss_pred ECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCC
Confidence 679999999999999999 55667777888999999999999999999985 6653
No 123
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.34 E-value=4.2e-13 Score=82.26 Aligned_cols=65 Identities=17% Similarity=0.064 Sum_probs=53.1
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEEc
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFVG 68 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v~ 68 (155)
|.|||.++++++|+++|+.++.+.......++|||||+|.+.++|.+|+..|+|.... .+.|.|.
T Consensus 15 V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~~kg~afV~f~~~~~A~~A~~~lng~~~~--gr~l~v~ 79 (111)
T d1whxa_ 15 AKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFH--HVPLYLE 79 (111)
T ss_dssp EESCCTTCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSS--SSBCEEE
T ss_pred EECCCCCCCHHHHHhhhhccCCccEEEeeccCceEEEEEcCHHHHHHHHHHHcCCccC--CCeEEEE
Confidence 6899999999999999996655555555678899999999999999999999995432 4566653
No 124
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.34 E-value=4.4e-13 Score=76.45 Aligned_cols=54 Identities=20% Similarity=0.264 Sum_probs=46.4
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.|||.++||++|+++|+ .+.++.+..++.+++||||+|.+.++|+.|++ +++.
T Consensus 4 V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~ 63 (75)
T d2msta_ 4 VGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFH 63 (75)
T ss_dssp EECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSC
T ss_pred EeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCC
Confidence 679999999999999999 34455566678899999999999999999985 7764
No 125
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=4.9e-13 Score=79.91 Aligned_cols=67 Identities=12% Similarity=0.068 Sum_probs=52.6
Q ss_pred cccCCCCCCHHHHHhhccc-------ceEEEcC-CCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEEc
Q 038175 2 GYCQVSDITNSILQETFSR-------AKVTIDS-NTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFVG 68 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~-------~~~~~~~-~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v~ 68 (155)
|.|||.++|+++|+++|+. +.++.+. .++.++|||||+|.+.++|..|+..|++.......+.|.|.
T Consensus 6 V~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 6 IGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp EECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred EcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 5699999999999999992 2223332 34678999999999999999999999876555556666663
No 126
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=1.3e-12 Score=78.77 Aligned_cols=54 Identities=17% Similarity=0.317 Sum_probs=46.6
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.|||.++|+++|+++|+ .+.++.+ .++.++|||||+|.+.++|.+|++.|||.
T Consensus 23 V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~-~~~~~~g~afV~f~~~~~A~~Ai~~lng~ 82 (101)
T d1x5oa1 23 ISNLPLSMDEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGK 82 (101)
T ss_dssp EESCCTTCCHHHHHHTTTTTSCEEEEEEEEC-SSSCEEEEEEEEESCHHHHHHHHHHHBTC
T ss_pred EeCCCCCCCHHHHHHHHhhcccccceeeecc-cccccccceeEEeCCHHHHHHHHHHhCCC
Confidence 679999999999999999 2334444 46788999999999999999999999994
No 127
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=2.4e-13 Score=80.01 Aligned_cols=64 Identities=9% Similarity=0.042 Sum_probs=50.1
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEEc
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFVG 68 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v~ 68 (155)
|.|||.++++++|+++|..+.+ .....+.+++||||+|.+.++|++|+..|++.. ...+.|.|.
T Consensus 10 V~nLp~~~t~~~l~~lF~~~G~-~~~~~~~~kg~afV~f~~~~~A~~Ai~~ln~~~--~~G~~l~V~ 73 (88)
T d1wg1a_ 10 VKNLPQDSNCQEVHDLLKDYDL-KYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYS--FRGKDLIVQ 73 (88)
T ss_dssp EESCCSSCCHHHHHHHTCSSCC-CCEEEEGGGTEEEECCSCHHHHHHHHHHHTTEE--ETTEEEEEE
T ss_pred EeCCCCccChHHHHHHHHhcCc-eeeeeeccCCceEEEECCHHHHHHHHHHhCCCE--ECCEEEEEE
Confidence 6899999999999999995552 122235678999999999999999999999843 235555553
No 128
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32 E-value=1.9e-12 Score=77.17 Aligned_cols=64 Identities=19% Similarity=0.180 Sum_probs=50.1
Q ss_pred cccCCCCCCHHHHHhhcc---cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS---RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~---~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ .+..+.......+++||||+|.+.++|+.|++.|++... ..+.|.|
T Consensus 19 V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~--~g~~l~V 85 (95)
T d1x4aa1 19 VGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDY--DGYRLRV 85 (95)
T ss_dssp EESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEE--TTEECEE
T ss_pred EECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEE--CCEEEEE
Confidence 679999999999999999 334344444567889999999999999999999998432 3344444
No 129
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=2e-12 Score=79.55 Aligned_cols=64 Identities=20% Similarity=0.195 Sum_probs=50.7
Q ss_pred cccCCCCCCHHHHHhhccc---ceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSR---AKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~---~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+. +.-+....++.++|||||+|.+.++|..|++.|+|... .++.|.|
T Consensus 12 V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~--~gr~l~V 78 (114)
T d2f9da1 12 IRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNV--CNRYLVV 78 (114)
T ss_dssp EESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEE--TTEECEE
T ss_pred EECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEE--CCEEEEE
Confidence 6799999999999999993 22233334567899999999999999999999999543 3455555
No 130
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=1.9e-12 Score=78.27 Aligned_cols=64 Identities=19% Similarity=0.224 Sum_probs=52.7
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEEc
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFVG 68 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v~ 68 (155)
|.|||.++|+++|+++|. .+.++++..++.++|||||+|.+.++|.+|+. +++. ...++.|.|.
T Consensus 25 VgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~--~l~G~~i~V~ 94 (103)
T d1x4ba1 25 IGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPH--SIDGRVVEPK 94 (103)
T ss_dssp EECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSE--EETTEEEEEE
T ss_pred EeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCC--eECCEEEEEE
Confidence 679999999999999999 56777788888999999999999999999985 4543 2355666664
No 131
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=1.4e-12 Score=78.72 Aligned_cols=64 Identities=17% Similarity=0.222 Sum_probs=53.5
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++++++|+++|. .+.++.+..++.++|||||+|.+.++|..|+..|+|... .++.|.|
T Consensus 23 V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~--~g~~l~V 92 (102)
T d2cpxa1 23 LKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKL--YGKILVI 92 (102)
T ss_dssp EECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBC--SSCBCEE
T ss_pred EeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEE--CCEEEEE
Confidence 679999999999999999 566666666788999999999999999999999998432 3444444
No 132
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=3.2e-12 Score=77.93 Aligned_cols=62 Identities=13% Similarity=0.181 Sum_probs=49.8
Q ss_pred cccCCCCCCHHHHHhhccc------ceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSR------AKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~------~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+. +.++.+ .++|+|||+|.+.++|+.|+..+++.........|.|
T Consensus 12 V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~----~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v 79 (108)
T d2adba1 12 VENLFYPVTLDVLHQIFSKFGTVLKIITFTK----NNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRI 79 (108)
T ss_dssp SCSCCSTTHHHHHHHHHTTTSCEEEEEEEEE----TTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEE
T ss_pred EeCcCCCCCHHHHHHHHccCCcEEEEEEEee----CCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEE
Confidence 7899999999999999992 333332 4679999999999999999999999665545555555
No 133
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=1.7e-12 Score=78.57 Aligned_cols=63 Identities=14% Similarity=0.116 Sum_probs=48.2
Q ss_pred cccCCCCCCHHHHHhhcccce------EEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSRAK------VTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~------~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++||++|+++|..+. ++.+..++.++|+|||+|.+.++|++|++ +++.. ...+.|.|
T Consensus 20 v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~--i~gR~i~V 88 (104)
T d1wg5a_ 20 LRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKER--IGHRYIEI 88 (104)
T ss_dssp EESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCC--SSSSCCEE
T ss_pred EeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCE--EcceEEEE
Confidence 579999999999999999332 33344567889999999999999999885 77643 34444444
No 134
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=5.6e-13 Score=78.55 Aligned_cols=62 Identities=39% Similarity=0.542 Sum_probs=48.3
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ .+.++.+. +.++|||||+|.+.++|++|+..|+|.. ..++.|.|
T Consensus 13 V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~--~~g~~i~V 80 (89)
T d1cvja2 13 IKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGML--LNDRKVFV 80 (89)
T ss_dssp EESCCSSCCHHHHHHHHHTTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEE--ETTEEEEE
T ss_pred EeCCCCCCCHHHHHHHHHhcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCE--ECCEEEEE
Confidence 679999999999999999 33343442 4578999999999999999999888732 23445555
No 135
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.29 E-value=1.5e-12 Score=76.72 Aligned_cols=54 Identities=11% Similarity=0.174 Sum_probs=45.4
Q ss_pred cccCCCCCCHHHH---Hhhcc------cceEEEcCCCCCC---cceEEEEeCCHHHHHHHHHHhcC
Q 038175 2 GYCQVSDITNSIL---QETFS------RAKVTIDSNTGHT---KGYGFVRFGDENERSRAMIEMNG 55 (155)
Q Consensus 2 v~nlp~~~te~~l---~~~f~------~~~~~~~~~~~~~---~g~afv~f~~~~~a~~a~~~~~~ 55 (155)
|.|||+++++++| .++|+ .+.+++++.++.+ +|||||+|.+.++|.+|++.|||
T Consensus 13 V~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng 78 (89)
T d2cpia1 13 VVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNN 78 (89)
T ss_dssp EEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTT
T ss_pred EECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCC
Confidence 6799999999999 67787 5666666655443 58999999999999999999987
No 136
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=5.4e-12 Score=76.07 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=49.0
Q ss_pred cccCCCCCCHHHHHhhcc-----cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS-----RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~-----~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||+++||++|+++|. .+.++.+ ..+..+|||||+|.+.++|++|+. +++.......-.|..
T Consensus 20 v~nLp~~~te~dl~~~F~~~~~~~v~~~~~-~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~ 88 (102)
T d1weza_ 20 MRGLPYRATENDIYNFFSPLNPMRVHIEIG-PDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFL 88 (102)
T ss_dssp EESCCTTCCHHHHHHSSCSCCCSEEEEEES-SSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEE
T ss_pred EeCCCCcCCHHHHHHHHhccCcceeeeEEe-cCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 679999999999999999 3444455 457889999999999999999985 777543333333333
No 137
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.29 E-value=1.9e-12 Score=75.71 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=49.1
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++++++|+++|+.++.+.+......++||||+|.+.++|+.|+..|++.... ++.|.|
T Consensus 13 V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~k~~afV~f~~~~~A~~A~~~l~g~~i~--g~~l~V 76 (86)
T d2cpja1 13 VGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLR--GKQLRV 76 (86)
T ss_dssp EESCCTTCCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTCCBT--TBCCEE
T ss_pred EECCCCCCCHHHHHHHHHHhCCceEeeeecccceEEEEECCHHHHHHHHHHhCCCEEC--CEEEEE
Confidence 6899999999999999994433333222345789999999999999999999986443 345554
No 138
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=3.5e-12 Score=75.68 Aligned_cols=62 Identities=21% Similarity=0.350 Sum_probs=48.9
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|. .+.++.+. +.++|||||+|.+.++|.+|+..|++.. ...+.|.|
T Consensus 16 v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~--~~~kg~afV~f~~~~~a~~Ai~~l~~~~--~~g~~l~V 83 (93)
T d2cq3a1 16 VSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE--RGSKGFGFVTFENSADADRAREKLHGTV--VEGRKIEV 83 (93)
T ss_dssp EESCCTTCCHHHHHHHGGGTSCEEEEEEECCT--TTTCCEEEEEESCHHHHHHHHHHHTTCE--ETTEECEE
T ss_pred EECCCCCCCHHHHHHHHhhcceeeeccccccc--cCCcceeEEEECCHHHHHHHHHHcCCCE--ECCEEEEE
Confidence 679999999999999999 34444443 4578999999999999999999999842 23345544
No 139
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=2.7e-12 Score=75.73 Aligned_cols=53 Identities=25% Similarity=0.394 Sum_probs=44.9
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.|||.++|+++|+++|+ .+.++.+.. ..+|||||+|.+.++|.+|+..+++.
T Consensus 13 V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~--~~~~~afV~f~~~~~A~~A~~~l~~~ 71 (90)
T d2cqia1 13 VGNLSRDVTEVLILQLFSQIGPCKSCKMITEHT--SNDPYCFVEFYEHRDAAAALAAMNGR 71 (90)
T ss_dssp EESCCTTCCHHHHHHHHHHHSCEEEEEEECCCC--SSCCEEEEEESSHHHHHHHHHHHTTE
T ss_pred EECCCCCCCHHHHHHHHHhcCCceeeeeecccC--ccceeeEEEECCHHHHHHHHHHcCCC
Confidence 679999999999999998 444555543 35799999999999999999999884
No 140
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.29 E-value=1.7e-12 Score=77.61 Aligned_cols=66 Identities=11% Similarity=0.099 Sum_probs=51.7
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++++++|+++|..+..+........++||||+|.+.++|+.|++.|++.........|.|
T Consensus 22 V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v 87 (97)
T d1whya_ 22 VGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRV 87 (97)
T ss_dssp EECCCSSCCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEE
T ss_pred EcCCCCCCCHHHHHHHHHhhcccceEeeeccccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEE
Confidence 689999999999999999443333333335678999999999999999999999665545555655
No 141
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=2e-12 Score=77.87 Aligned_cols=64 Identities=22% Similarity=0.275 Sum_probs=51.0
Q ss_pred cccCCCCCCHHHHHhhcccc--------------eEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSRA--------------KVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~--------------~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|..+ .+..+..++.++|||||+|.+.++|.+|+..++|.. ..++.|.|
T Consensus 13 V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~--~~gr~i~V 90 (101)
T d2cpea1 13 VQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKD--FQGSKLKV 90 (101)
T ss_dssp EECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCE--ETTEECEE
T ss_pred EECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCE--ECCEEEEE
Confidence 67999999999999999833 223445567889999999999999999999999843 23455555
No 142
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28 E-value=3.1e-12 Score=74.62 Aligned_cols=52 Identities=17% Similarity=0.063 Sum_probs=44.1
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNG 55 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~ 55 (155)
|.|||.++|+++|+++|+ .+.+..+ .++.++|||||+|.+.++|.+|++ +++
T Consensus 11 V~nlp~~~te~~l~~~F~~~G~v~~v~l~~~-~~~~~kG~afV~f~~~e~a~~al~-~~~ 68 (85)
T d1zh5a2 11 IKGFPTDATLDDIKEWLEDKGQVLNIQMRRT-LHKAFKGSIFVVFDSIESAKKFVE-TPG 68 (85)
T ss_dssp EECCCTTCCHHHHHHHHTTSCCEEEEEEEEC-TTCCEEEEEEEEESCHHHHHHHHT-CCC
T ss_pred EECCCCCCCHHHHHHHHHHhcccccceeeee-ccCCcceEEEEEEcCHHHHHHHHH-HCC
Confidence 679999999999999999 4555454 478899999999999999999985 444
No 143
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=1.2e-12 Score=76.77 Aligned_cols=54 Identities=13% Similarity=0.086 Sum_probs=45.1
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.|||+++|+++|+++|+.++.+.... ...+|||||+|.+.++|++|+..|++.
T Consensus 5 V~nlp~~~~~~~l~~~F~~~G~v~~~~-i~~~g~afV~f~~~~~a~~Ai~~l~g~ 58 (87)
T d3begb1 5 VSGLPPSGSWQDLKDHMREAGDVCYAD-VYRDGTGVVEFVRKEDMTYAVRKLDNT 58 (87)
T ss_dssp EEECCSSCCTTHHHHHHGGGSCEEEEE-ECTTSEEEEEESSHHHHHHHHHHHTTC
T ss_pred EECCCCcCCHHHHHHHHhhhccccccc-ccccceeeEEeCCHHHHHHHHHHhCCC
Confidence 789999999999999999665444332 234589999999999999999999993
No 144
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.27 E-value=1.6e-12 Score=78.77 Aligned_cols=66 Identities=9% Similarity=-0.022 Sum_probs=52.1
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++||++|.++|+.+..+........+++|||+|.+.++|+.|+..+++.......+.|.|
T Consensus 20 v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v 85 (104)
T d1wexa_ 20 VRGLCESVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFF 85 (104)
T ss_dssp EESCCSSCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEE
T ss_pred EeCCCCCCCHHHHHHhhhhcccceEEEEEecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEE
Confidence 679999999999999999544444333345688999999999999999998876555556666666
No 145
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.26 E-value=1.8e-12 Score=77.37 Aligned_cols=55 Identities=25% Similarity=0.370 Sum_probs=46.5
Q ss_pred cccCCCCCCHHHHHhhcccceEEEc-CCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFSRAKVTID-SNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~-~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.|||.++|+++|+++|..+..+.. ..++.++|||||+|.+.++|.+|+..|++.
T Consensus 21 V~nL~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~ 76 (96)
T d1fjca_ 21 AKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGA 76 (96)
T ss_dssp EESCCSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEE
T ss_pred EeCCCCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCC
Confidence 6899999999999999995543322 246788999999999999999999999873
No 146
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=3.5e-12 Score=74.89 Aligned_cols=64 Identities=16% Similarity=0.182 Sum_probs=49.1
Q ss_pred cccCCCCCCHHHHHhhcccc---eEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSRA---KVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~---~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+.+ .... ...+.++|+|||+|.+.++|.+|+..|+|.... .++.|.|
T Consensus 15 V~NLp~~~te~~l~~~F~~~G~v~~~~-~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~-~g~~l~v 81 (88)
T d2adca2 15 LSNIPPSVSEEDLKVLFSSNGGVVKGF-KFFQKDRKMALIQMGSVEEAVQALIDLHNHDLG-ENHHLRV 81 (88)
T ss_dssp EECCCTTCCHHHHHHHHHTTSCCEEEE-EECSSSTTCEEEEESSHHHHHHHHHHHTTCBSS-SSCBCEE
T ss_pred EECCCCCCCHHHHHHHhhccCCEEEEE-EeeecccceeEEEECCHHHHHHHHHhccCCEec-CCCEEEE
Confidence 67999999999999999932 2121 234567899999999999999999999995432 3355555
No 147
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=3.5e-12 Score=77.08 Aligned_cols=64 Identities=20% Similarity=0.218 Sum_probs=51.4
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEEc
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFVG 68 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v~ 68 (155)
|.|||.++|+++|+++|. ....+....++.++|+|||+|.+.++|++|+. +++. ....+.|.|.
T Consensus 13 v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~--~i~gr~i~V~ 82 (103)
T d2cpya1 13 ITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRK--KLNGREAFVH 82 (103)
T ss_dssp EESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSE--EETTEEEEEE
T ss_pred EeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCC--eECCcEEEEE
Confidence 579999999999999999 23444555678899999999999999999995 7663 3455677764
No 148
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.25 E-value=1.7e-12 Score=76.74 Aligned_cols=62 Identities=18% Similarity=0.204 Sum_probs=49.0
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+ .+.++.+ .++.++|||||+|.+.++|++|++ +++.. ...+.|.|
T Consensus 18 V~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~--~~g~~i~V 85 (91)
T d1fjeb1 18 IGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLK--VFGNEIKL 85 (91)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEE--ETTEEEEE
T ss_pred EeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcE--ECCEEEEE
Confidence 679999999999999999 4555443 478899999999999999999995 87732 22444444
No 149
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=6.5e-13 Score=77.77 Aligned_cols=64 Identities=19% Similarity=0.312 Sum_probs=48.4
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+.++.+.....+.++|||||+|.+.++|..|+..|++.. ..++.|.|
T Consensus 13 V~nLp~~~te~~l~~~F~~~g~i~~~~~~~~rg~afV~f~~~~~A~~Ai~~l~~~~--i~g~~i~V 76 (86)
T d2cpda1 13 VRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKV--LDGSPIEV 76 (86)
T ss_dssp EESCCTTCCHHHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHHHHSSEE--ETTEEEEE
T ss_pred EcCCCCCCCHHHHHHhhcccceeeeEEEccccEEEEEEeCCHHHHHHHHHHcCCCE--ECCEEEEE
Confidence 67999999999999999933221111234678999999999999999999999833 23455555
No 150
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=2.8e-12 Score=75.28 Aligned_cols=66 Identities=9% Similarity=-0.012 Sum_probs=50.8
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|.++|+..+.+........+++|||+|.+.++|..|+..+++......++.|.|
T Consensus 13 V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v 78 (88)
T d2cq1a1 13 IRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYI 78 (88)
T ss_dssp EESCCTTCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred EeCCCCCCCHHHHHHHHhcccccccccccccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEE
Confidence 679999999999999999443333333335678999999999999999998876555555666665
No 151
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=3.1e-12 Score=76.99 Aligned_cols=53 Identities=19% Similarity=0.298 Sum_probs=45.0
Q ss_pred cCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 4 CQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 4 nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
+||.++|+++|+++|+.++.+........++||||+|.+.++|..|+..|+|.
T Consensus 27 ~L~~~vte~~L~~~F~~~G~i~~i~~~~~k~~aFV~f~~~e~A~~A~~~lng~ 79 (101)
T d2cq2a1 27 GLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGK 79 (101)
T ss_dssp TGGGTCCHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHHTTTC
T ss_pred CCCCCCCHHHHHHHHHhhCcccEEeeccCccEEEEEECCHHHHHHHHHHhCCC
Confidence 49999999999999995555444444566889999999999999999999994
No 152
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=6.1e-12 Score=77.12 Aligned_cols=64 Identities=20% Similarity=0.180 Sum_probs=51.4
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEEc
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFVG 68 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v~ 68 (155)
|.|||.++|+++|+++|+ .+.++....+|.++|+|||+|.+.++|++|+. +++.. ...+.|.|.
T Consensus 23 v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~--i~gR~i~V~ 92 (112)
T d1wela1 23 LKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQY--MGNRFIQVH 92 (112)
T ss_dssp EECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBC--STTSCBEEE
T ss_pred EecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCc--CCCEEEEEE
Confidence 579999999999999998 33455666688999999999999999999985 77754 445555553
No 153
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=3.4e-12 Score=76.14 Aligned_cols=56 Identities=27% Similarity=0.456 Sum_probs=44.5
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCC
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSD 57 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~ 57 (155)
|.|||.++++++|+++|+.++.+.+......+|||||+|.+.++|..|+..|++..
T Consensus 23 v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~kg~afV~f~~~~~A~~Ai~~l~~~~ 78 (96)
T d1x4ga1 23 CGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTT 78 (96)
T ss_dssp EECCSSCCCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTCE
T ss_pred EcCCCCCCCHHHHHHHHHHhCCceEEEEEecceEEEEEECCHHHHHHHHHHhCCCE
Confidence 67999999999999999943333222222347999999999999999999998844
No 154
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.20 E-value=6e-12 Score=75.33 Aligned_cols=53 Identities=11% Similarity=0.100 Sum_probs=44.0
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcC
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNG 55 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~ 55 (155)
|.|||.++++++|+++|+.+..+.... ..++|||||+|.+.++|++|++.||+
T Consensus 20 V~Nlp~~~~~~~L~~~F~~~G~v~~~~-i~~~g~afV~f~~~~~a~~Ai~~lng 72 (98)
T d1wg4a_ 20 VSGLPPSGSWQDLKDHMREAGDVCYAD-VQKDGMGMVEYLRKEDMEYALRKLDD 72 (98)
T ss_dssp EECCCSSCCHHHHHHHHTTSSCEEEEE-EETTTEEEEEESSHHHHHHHHHHHSS
T ss_pred EECCCCCCCHHHHHHHHHhhccccccc-ccccceEEEEECCHHHHHHHHHHhCC
Confidence 679999999999999999544333321 23568999999999999999999998
No 155
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.18 E-value=1.8e-11 Score=69.57 Aligned_cols=62 Identities=10% Similarity=0.049 Sum_probs=46.8
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEEc
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFVG 68 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v~ 68 (155)
|.|||.++++++|+++|+ .+.++.+. +..++||||+|.+.++|.+|+. +++. ...++.|.|.
T Consensus 5 V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~--~~~~~~afV~F~~~~~a~~Al~-~~~~--~i~g~~i~V~ 72 (75)
T d2ghpa2 5 VKNLPKSYNQNKVYKYFKHCGPIIHVDVADSL--KKNFRFARIEFARYDGALAAIT-KTHK--VVGQNEIIVS 72 (75)
T ss_dssp EEEECTTCCHHHHHHHHGGGSCEEEEEEEECT--TSSSEEEEEEESSHHHHHHHHT-TTTC--EETTEECEEE
T ss_pred EECCCCCCCHHHHHHHHhcCCceEEEEEEeec--cccceEEEEEEcchHHhHHHHH-hcCc--EECCEEEEEE
Confidence 689999999999999999 44555554 3456799999999999999984 6653 2344555543
No 156
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=1.1e-11 Score=74.92 Aligned_cols=63 Identities=24% Similarity=0.331 Sum_probs=47.1
Q ss_pred cccCCCCCCHHHHHhhcccceE-----EEcC-CCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQETFSRAKV-----TIDS-NTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~-----~~~~-~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|+++|+.+.+ +.+. .++.++|||||+|.+.++|++|+ .+++.. ...+.|.|
T Consensus 20 V~nLp~~~te~~l~~~f~~~g~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~--~~gr~l~V 88 (104)
T d1wi8a_ 20 LGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEES--LGNKRIRV 88 (104)
T ss_dssp EESCCSSCCHHHHHHHTTTSCEEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCE--ETTEECEE
T ss_pred EeCCCCcCCHHHHHHHHHHhccccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCE--ECCEEEEE
Confidence 6899999999999999995443 2222 35678999999999999998766 587733 23445554
No 157
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.17 E-value=1.2e-11 Score=71.66 Aligned_cols=57 Identities=14% Similarity=0.075 Sum_probs=44.6
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcC-CCCCCcceEEEEeCCHHHHHHHHHHhcCCCC
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDS-NTGHTKGYGFVRFGDENERSRAMIEMNGSDG 58 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~-~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~ 58 (155)
|.|||.++|+++|.++|+.++.+... .....+|||||+|.+.++|..|+..|+|...
T Consensus 13 V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~ 70 (83)
T d2b0ga1 13 LTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKI 70 (83)
T ss_dssp EESCCTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBS
T ss_pred EECCCCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEe
Confidence 67999999999999999933222111 1234578999999999999999999998543
No 158
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.16 E-value=5.3e-12 Score=73.78 Aligned_cols=63 Identities=21% Similarity=0.306 Sum_probs=44.1
Q ss_pred cccCCCCCC-HHHHHhhccc------ceEEE-cCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDIT-NSILQETFSR------AKVTI-DSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~t-e~~l~~~f~~------~~~~~-~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++| |++|+++|+. +.++. +..++.++|||||+|.+.++|.+|++ +++.. ..++.|.|
T Consensus 9 V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~--~~gr~l~V 79 (86)
T d2ghpa3 9 IRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSL--LGNREISV 79 (86)
T ss_dssp EEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEE--ETTEEEEE
T ss_pred EECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCE--ECCEEEEE
Confidence 679999986 5569999992 33322 23467889999999999999999995 87733 23445544
No 159
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=2.7e-11 Score=73.74 Aligned_cols=57 Identities=19% Similarity=0.079 Sum_probs=42.8
Q ss_pred cccCCC-CCCHHHHHhhcccceEEEcCC-CCCCcceEEEEeCCHHHHHHHHHHhcCCCC
Q 038175 2 GYCQVS-DITNSILQETFSRAKVTIDSN-TGHTKGYGFVRFGDENERSRAMIEMNGSDG 58 (155)
Q Consensus 2 v~nlp~-~~te~~l~~~f~~~~~~~~~~-~~~~~g~afv~f~~~~~a~~a~~~~~~~~~ 58 (155)
|.|||+ .+|+++|+++|+.++.+.... ....+|||||+|.+.++|.+|+..+++...
T Consensus 7 V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l 65 (109)
T d2adca1 7 VSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKL 65 (109)
T ss_dssp EESCCTTTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBC
T ss_pred EeCCCcccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEE
Confidence 789954 699999999999332222111 123478999999999999999999998543
No 160
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=3.6e-12 Score=75.14 Aligned_cols=55 Identities=18% Similarity=0.272 Sum_probs=44.6
Q ss_pred cccCCCCCCHHHHHhhcc------cc-----eEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCC
Q 038175 2 GYCQVSDITNSILQETFS------RA-----KVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSD 57 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~-----~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~ 57 (155)
|.|||.++||++|+++|+ .+ ..+.+..++.++|||||+|.+.++|++|+ .|+|..
T Consensus 6 VgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~ 71 (90)
T d1u2fa_ 6 VGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGII 71 (90)
T ss_dssp ECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCC
T ss_pred EcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcE
Confidence 689999999999999998 11 22334456778999999999999999998 488833
No 161
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=2e-11 Score=71.95 Aligned_cols=64 Identities=20% Similarity=0.208 Sum_probs=47.3
Q ss_pred cccCCCCCCHHHHHhh----cccc---eEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSDITNSILQET----FSRA---KVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~~te~~l~~~----f~~~---~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.++|+++|++. |+.+ .-+....++.++|||||+|.+.++|..|+..+++... .++.|.|
T Consensus 8 V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~--~g~~l~v 78 (91)
T d1nu4a_ 8 INNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPF--YDKPMRI 78 (91)
T ss_dssp EESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEE--TTEECEE
T ss_pred EeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEE--CCEEEEE
Confidence 6799999999999754 5533 2333333456789999999999999999999998432 2445555
No 162
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.09 E-value=1.4e-11 Score=73.84 Aligned_cols=66 Identities=6% Similarity=-0.122 Sum_probs=47.1
Q ss_pred cccCCCC-CCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSD-ITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~-~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.+ +|+++|.++|+.++.+.+......+|+|||+|.+.++|.+|+..++.......++.|.|
T Consensus 23 v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V 89 (99)
T d1x4fa1 23 LSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKV 89 (99)
T ss_dssp EESCCCSSCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEE
T ss_pred EeCCcCCccCHHHHHhhhccccceeEEEEeecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEE
Confidence 6899985 89999999999443333322334578999999999999999985544333344444544
No 163
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=2e-11 Score=70.13 Aligned_cols=55 Identities=24% Similarity=0.370 Sum_probs=43.8
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCC
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDG 58 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~ 58 (155)
|.||| +|+++|+++|+.++.+.+......++||||+|.+.++|..|+..|++...
T Consensus 10 V~~~~--~te~~L~~~F~~~G~I~~v~~~~~~~~afV~f~~~~~A~~Ai~~lng~~~ 64 (79)
T d2bz2a1 10 VYGED--MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQV 64 (79)
T ss_dssp EECSS--CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBC
T ss_pred EECCC--CCHHHHHHHHhccCccceeeeccCCCEEEEEEcccHHHHHHHHHhCCCEE
Confidence 56765 89999999999554444443445678999999999999999999998543
No 164
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.06 E-value=4e-11 Score=71.64 Aligned_cols=54 Identities=19% Similarity=0.218 Sum_probs=43.6
Q ss_pred cccCC-CCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCC
Q 038175 2 GYCQV-SDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSD 57 (155)
Q Consensus 2 v~nlp-~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~ 57 (155)
|.||| ..+++++|+++|..+..+.+.. .++|||||+|.+.++|++|+..|++..
T Consensus 20 V~nL~~~~~~~~~L~~~F~~~G~i~~~~--i~rg~aFV~f~~~~~A~~Ai~~lng~~ 74 (98)
T d1wf2a_ 20 IGNLNTLVVKKSDVEAIFSKYGKIVGCS--VHKGFAFVQYVNERNARAAVAGEDGRM 74 (98)
T ss_dssp EEEECTTTCCHHHHHHSSTTSSCEEEEE--EETEEEEEEESSHHHHHHHHHTTTTCE
T ss_pred EeCCCcccCCHHHHHHHHhhcCCEEEEE--EeCCeEEEEECCHHHHHHHHHHcCCCE
Confidence 57996 5788999999999554444432 267999999999999999999999843
No 165
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.05 E-value=2.8e-11 Score=70.92 Aligned_cols=63 Identities=17% Similarity=0.168 Sum_probs=45.5
Q ss_pred cccCCCCCCHHHHHhhcccceEEEc-CCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEEc
Q 038175 2 GYCQVSDITNSILQETFSRAKVTID-SNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFVG 68 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~-~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v~ 68 (155)
|.|||.++||++|+++|+.+..+.+ .....+++||||+|.+.++|++|+. ++ .....+.|.|.
T Consensus 10 V~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~--~~i~g~~l~v~ 73 (88)
T d1wf0a_ 10 VGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--ED--LIIKGISVHIS 73 (88)
T ss_dssp EESCCSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CE--EEETTEEEEEE
T ss_pred EeCCCCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CC--CEECCEEeEEE
Confidence 6799999999999999994332221 1345678999999999999999974 22 12445555553
No 166
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.02 E-value=2.1e-10 Score=70.21 Aligned_cols=67 Identities=12% Similarity=-0.019 Sum_probs=52.9
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCH-HHHHHHHHHhcCCCCCCCCcEEEEc
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDE-NERSRAMIEMNGSDGKSNNATIFVG 68 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~-~~a~~a~~~~~~~~~~~~~~~l~v~ 68 (155)
|.|||.++|+++|+++|+.++.+........+|||||.|.+. ++|..|+..+++.........+-+.
T Consensus 16 vgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~ 83 (113)
T d1owxa_ 16 SGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWE 83 (113)
T ss_dssp EESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEE
T ss_pred ECCCCCCCCHHHHHHHHHhcCChheEEEecCCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEe
Confidence 569999999999999999665555554456789999999996 6789999999986655555555554
No 167
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.02 E-value=5.8e-11 Score=69.66 Aligned_cols=66 Identities=8% Similarity=-0.089 Sum_probs=51.0
Q ss_pred cccCCCC-CCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEE
Q 038175 2 GYCQVSD-ITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFV 67 (155)
Q Consensus 2 v~nlp~~-~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v 67 (155)
|.|||.. +|++||.++|+.++.+........+++|||+|.+.++|..|+..+++......++.|.|
T Consensus 13 v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V 79 (89)
T d1x4da1 13 IMDFQRGKNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRV 79 (89)
T ss_dssp EESCCCSSSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred EECCCCCcCCHHHHHHHHHhhCCeEEEEeeccceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEE
Confidence 6799985 89999999999555555444445678999999999999999998766554555566655
No 168
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.91 E-value=2.5e-10 Score=65.63 Aligned_cols=53 Identities=13% Similarity=0.203 Sum_probs=43.8
Q ss_pred cccCCCCCCHHHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|+.+|++.+++.|+ .|+.++.+.+...+..++||||+|.+.++|++|+. ++|.
T Consensus 9 V~G~p~~~~~~il~-~F~~~G~I~~~~~~~~~~~~fV~f~~~~~A~~Al~-~nG~ 61 (81)
T d1wwha1 9 VFGFPQASASYILL-QFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALS-KDGR 61 (81)
T ss_dssp EECCCGGGHHHHHH-HHHTTSCEEEEEECSSSSEEEEEESSHHHHHHHHT-TTTC
T ss_pred EECCChHHHHHHHH-HHHhhhhhheEEecCCCCEEEEEEcccHHHHHHHh-cCCC
Confidence 78899999976665 78877666666667788999999999999999995 7774
No 169
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86 E-value=2.2e-10 Score=69.05 Aligned_cols=54 Identities=19% Similarity=0.286 Sum_probs=44.5
Q ss_pred cccCCCCCCHHHHHhhcc------cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDITNSILQETFS------RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~------~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.+++.+++|++|+++|+ ++.++++ .++.++|+|||+|.+.++|.+|+..|+|.
T Consensus 32 v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~ 91 (104)
T d1jmta_ 32 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNR 91 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTC
T ss_pred hhhhhhhhhHHHHHHHhccCCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCC
Confidence 345677888999999987 4555444 57889999999999999999999999983
No 170
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.76 E-value=2.9e-10 Score=68.48 Aligned_cols=55 Identities=7% Similarity=0.068 Sum_probs=41.3
Q ss_pred cccCCCCC-CH----HHHHhhcccceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 2 GYCQVSDI-TN----SILQETFSRAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 2 v~nlp~~~-te----~~l~~~f~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
|.||+.++ ++ ++|+++|+.++.+.+.....+++||||+|.+.++|.+|+..|+|.
T Consensus 10 v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~~~~afV~f~~~~~A~~Ai~~lng~ 69 (104)
T d1weya_ 10 ACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAADARLRLHKT 69 (104)
T ss_dssp EECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETTTTEEEEECSSTTHHHHHHHTSTTS
T ss_pred EEeCCchhcCcHHHHHHHHHHhcccccceEEEEecCCCEEEEEECCHHHHHHHHHHhccc
Confidence 67887775 33 568888984433333333467889999999999999999999993
No 171
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.31 E-value=3.3e-06 Score=45.75 Aligned_cols=57 Identities=28% Similarity=0.343 Sum_probs=50.0
Q ss_pred HHHHHhhccCCeEEEEeeCC---CcEEEEEecCHHHHHHHHHHhcCCeeCCeEEEEEecc
Q 038175 78 DLRELFSHFGEILSVKIPVG---KGCGFVQFANRKDAEVALQKLQGTAIGKQTVRLSWGH 134 (155)
Q Consensus 78 ~l~~~f~~~g~v~~~~~~~~---~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~v~~~~ 134 (155)
.|...|.+++.|..+.+... .-.|-|...+..+|..|+..|+..++++++|.|+|++
T Consensus 12 ~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 12 LLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 45567889999999988653 3569999999999999999999999999999999975
No 172
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.04 E-value=4.8e-06 Score=49.00 Aligned_cols=45 Identities=20% Similarity=0.260 Sum_probs=33.6
Q ss_pred HHHHHhhcc---cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHhcCC
Q 038175 11 NSILQETFS---RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEMNGS 56 (155)
Q Consensus 11 e~~l~~~f~---~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~ 56 (155)
+++|++.|+ .+..+.. ..+..+|+|||+|.+.++|.+|+..|+|.
T Consensus 33 ~edv~~~~~~~G~V~~v~~-~~~~~~G~~fV~f~~~e~A~~A~~~lng~ 80 (99)
T d2dita1 33 REDLRVECSKFGQIRKLLL-FDRHPDGVASVSFRDPEEADYCIQTLDGR 80 (99)
T ss_dssp HHHHHHHGGGTSCCSEEEE-ETTCTTCEEEEECSCHHHHHHHHHHSTTC
T ss_pred HHHHHHHhcCcccEEEEec-cCCCCccEEEEEECCHHHHHHHHHHhCCc
Confidence 367888888 2322222 23456799999999999999999999984
No 173
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.89 E-value=3.2e-05 Score=43.90 Aligned_cols=72 Identities=24% Similarity=0.388 Sum_probs=56.6
Q ss_pred CCCCcEEEEcCCCCCC------C---HHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCCeeCCeEEE
Q 038175 59 KSNNATIFVGALDSNV------S---DKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGTAIGKQTVR 129 (155)
Q Consensus 59 ~~~~~~l~v~~l~~~~------~---~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~~~~g~~l~ 129 (155)
.++..++.|.-..... . ..+|.+.|..||.|.-+++. .+...|+|.+-+.|.+|+. ++|.++.|+.|+
T Consensus 12 GPpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv--~d~mwVTF~dG~SAL~al~-l~g~~v~G~~l~ 88 (95)
T d1ufwa_ 12 GPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRIN--QGQMLVTFADSHSALSVLD-VDGMKVKGRAVK 88 (95)
T ss_dssp CCTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEE--TTEEEEECSCSHHHHHHHH-GGGSEETTEEEE
T ss_pred CCCCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEe--CCeEEEEECCcHHHHHHhc-cCCeEEcceEEE
Confidence 4556677674333222 2 24677889999999999988 5689999999999999998 799999999999
Q ss_pred EEec
Q 038175 130 LSWG 133 (155)
Q Consensus 130 v~~~ 133 (155)
|+..
T Consensus 89 It~~ 92 (95)
T d1ufwa_ 89 ISGP 92 (95)
T ss_dssp EECC
T ss_pred EecC
Confidence 9853
No 174
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.87 E-value=9.2e-06 Score=48.13 Aligned_cols=47 Identities=17% Similarity=0.168 Sum_probs=33.7
Q ss_pred HHHHHhhcc------cceEEEcCCC--CCCcceEEEEeCCHHHHHHHHHHhcCCC
Q 038175 11 NSILQETFS------RAKVTIDSNT--GHTKGYGFVRFGDENERSRAMIEMNGSD 57 (155)
Q Consensus 11 e~~l~~~f~------~~~~~~~~~~--~~~~g~afv~f~~~~~a~~a~~~~~~~~ 57 (155)
.++|++.|. ++.+.++... ....|++||+|.+.++|.+|+..|+|..
T Consensus 28 ~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 28 VEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp HHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred HHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 456777777 2333332222 2356899999999999999999999944
No 175
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.46 E-value=0.00043 Score=39.52 Aligned_cols=72 Identities=11% Similarity=0.207 Sum_probs=58.0
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCC--------CcEEEEEecCHHHHHHHHHHhcCCeeCC-----eEEE
Q 038175 63 ATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVG--------KGCGFVQFANRKDAEVALQKLQGTAIGK-----QTVR 129 (155)
Q Consensus 63 ~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~--------~g~~~v~f~~~~~a~~a~~~l~~~~~~g-----~~l~ 129 (155)
.+|.|..||..++++++.+.++..|.+.......+ ..-|+|.|.+.++...-.+..+|..+-+ .+..
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~ 81 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAI 81 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeE
Confidence 57889999999999999999998888877665432 2569999999999999999999998732 2445
Q ss_pred EEecc
Q 038175 130 LSWGH 134 (155)
Q Consensus 130 v~~~~ 134 (155)
|+||-
T Consensus 82 VE~AP 86 (91)
T d1uw4a_ 82 VEFAP 86 (91)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 66653
No 176
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.32 E-value=0.00092 Score=38.38 Aligned_cols=64 Identities=22% Similarity=0.367 Sum_probs=53.2
Q ss_pred cCCCCCCCCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhc
Q 038175 54 NGSDGKSNNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQ 119 (155)
Q Consensus 54 ~~~~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~ 119 (155)
.|+.+.+....+|.-..|..+...||.++|++||.|.-.-+. ..-|||.....++|+.++..+.
T Consensus 7 ~G~d~~p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswId--dTSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 7 GGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWID--DTSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCSCCCCCCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEEE--TTEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCCCCCcceeEEEeCCcccchhHHHHHhcCCCceEEEEec--CceEEEEecCHHHHHHHHHHhc
Confidence 346778888999999999999999999999999987543333 5689999999999999887544
No 177
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.52 E-value=0.013 Score=33.21 Aligned_cols=54 Identities=15% Similarity=0.137 Sum_probs=39.1
Q ss_pred cccCCCCCCHHHHHhhcc---cceEE----EcCCCC-CCcceEEEEeCCHHHHHHHHHHhcC
Q 038175 2 GYCQVSDITNSILQETFS---RAKVT----IDSNTG-HTKGYGFVRFGDENERSRAMIEMNG 55 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~---~~~~~----~~~~~~-~~~g~afv~f~~~~~a~~a~~~~~~ 55 (155)
|..||+..||+++.+.++ +.... .+...+ .....|+|.|.+.++........+|
T Consensus 6 vRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g 67 (91)
T d1uw4a_ 6 IRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDG 67 (91)
T ss_dssp EEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTT
T ss_pred EecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCC
Confidence 578999999999999998 11111 111112 2345799999999999999888877
No 178
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.50 E-value=0.72 Score=25.98 Aligned_cols=42 Identities=19% Similarity=0.139 Sum_probs=33.4
Q ss_pred CCCCCCHHHHHhhcc-----cceEEEcCCCCCCcceEEEEeCCHHHHHHHHHHh
Q 038175 5 QVSDITNSILQETFS-----RAKVTIDSNTGHTKGYGFVRFGDENERSRAMIEM 53 (155)
Q Consensus 5 lp~~~te~~l~~~f~-----~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~ 53 (155)
.|.++...||.++|+ .+..+.+. .|||.-.+.++|+.++..+
T Consensus 23 FP~~Wk~~dI~~lFSpfG~V~VswIddT-------Sa~V~L~~~e~~~~v~~~~ 69 (100)
T d1whva_ 23 FPKEWKTSDLYQLFSAFGNIQISWIDDT-------SAFVSLSQPEQVQIAVNTS 69 (100)
T ss_dssp CCTTCCHHHHHHHHTTTCSCCCEEEETT-------EEEEECSCHHHHHHHHHHH
T ss_pred CCcccchhHHHHHhcCCCceEEEEecCc-------eEEEEecCHHHHHHHHHHh
Confidence 499999999999999 33334332 6999999999999888654
No 179
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=64.00 E-value=9.7 Score=21.63 Aligned_cols=41 Identities=12% Similarity=0.305 Sum_probs=29.6
Q ss_pred HHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcC
Q 038175 77 KDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQG 120 (155)
Q Consensus 77 ~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~ 120 (155)
.++++.+..+|.. .+.-+-..+|..|++.+.|..+.+.+..
T Consensus 60 ~~~~~~L~~~g~~---~MSGSGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---RLTGTGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHHTTTSCE---EECTTSSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHHhhcccc---eecCCCCEEEEEeCCHHHHHHHHHHcCc
Confidence 3566667788853 3433334689999999999999998753
No 180
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=40.20 E-value=27 Score=19.37 Aligned_cols=44 Identities=18% Similarity=0.085 Sum_probs=32.0
Q ss_pred HHHHHHhhccCCeEEEEeeCCCcEEEEEecCHHHHHHHHHHhcCC
Q 038175 77 KDLRELFSHFGEILSVKIPVGKGCGFVQFANRKDAEVALQKLQGT 121 (155)
Q Consensus 77 ~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~~~a~~a~~~l~~~ 121 (155)
.++++.+..+|... +.+.=+-..+|..|.+.+.|+.+.+.|...
T Consensus 66 ~~~~~~l~~~g~~~-~~mSGSGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLMSGSGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-EEECTTSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-eeecCCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 45666777787533 444434456899999999999999988665
No 181
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.48 E-value=29 Score=17.72 Aligned_cols=57 Identities=14% Similarity=0.226 Sum_probs=44.1
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEec----CHHHHHHHHHH
Q 038175 61 NNATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFA----NRKDAEVALQK 117 (155)
Q Consensus 61 ~~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~----~~~~a~~a~~~ 117 (155)
..-+|.|.++.=......|+..+...-.|..+.+....+-+.|.|+ +.....++++.
T Consensus 8 ~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~ 68 (79)
T d1kvja_ 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDD 68 (79)
T ss_dssp EEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 3446778888777777889999999988999988888888999985 44555556654
No 182
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=33.16 E-value=28 Score=17.52 Aligned_cols=46 Identities=11% Similarity=0.020 Sum_probs=30.5
Q ss_pred HHHHHHHhhccC-CeEEEEeeCCCcEE--EEEecCHHHHHHHHHHhcCCe
Q 038175 76 DKDLRELFSHFG-EILSVKIPVGKGCG--FVQFANRKDAEVALQKLQGTA 122 (155)
Q Consensus 76 ~~~l~~~f~~~g-~v~~~~~~~~~g~~--~v~f~~~~~a~~a~~~l~~~~ 122 (155)
-..+-+.|.+.| .|.++......+.+ -+..++++.|..+++. +|..
T Consensus 13 L~~v~~~L~~~~InI~~~y~~~~~~~~~~vl~vdd~~~a~~~L~~-~G~~ 61 (71)
T d2f06a1 13 LAKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSNMDKCIEVLKE-KKVD 61 (71)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH-TTCE
T ss_pred HHHHHHHHHHCCCCEEEEEEEcCCCcEEEEEEECCHHHHHHHHHH-CCCE
Confidence 346778888888 67776554444444 4456788888888775 5654
No 183
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=32.79 E-value=9.2 Score=16.52 Aligned_cols=12 Identities=42% Similarity=0.847 Sum_probs=8.9
Q ss_pred CHHHHHHHhhcc
Q 038175 75 SDKDLRELFSHF 86 (155)
Q Consensus 75 ~~~~l~~~f~~~ 86 (155)
++++|++.|..|
T Consensus 1 seeel~eAF~~F 12 (33)
T d2hf5a1 1 SEEEIREAFRVF 12 (33)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 467888888766
No 184
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.98 E-value=29 Score=17.31 Aligned_cols=53 Identities=8% Similarity=0.150 Sum_probs=37.5
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecCH---HHHHHHHH
Q 038175 64 TIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFANR---KDAEVALQ 116 (155)
Q Consensus 64 ~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~~---~~a~~a~~ 116 (155)
+|-|.++.=..-...|+..+.+...|..+.+....+.+.|.|+.. ++...+++
T Consensus 5 ~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~ 60 (72)
T d2ggpb1 5 ILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE 60 (72)
T ss_dssp EEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHH
Confidence 344555555555677889999988899999888888899998753 34444444
No 185
>d1utaa_ d.58.52.1 (A:) Cell division protein FtsN {Escherichia coli [TaxId: 562]}
Probab=31.46 E-value=23 Score=18.07 Aligned_cols=16 Identities=6% Similarity=0.204 Sum_probs=10.0
Q ss_pred EeCCHHHHHHHHHHhc
Q 038175 39 RFGDENERSRAMIEMN 54 (155)
Q Consensus 39 ~f~~~~~a~~a~~~~~ 54 (155)
.|.+.+.|+.....|.
T Consensus 12 aF~~~~nA~~l~~~L~ 27 (77)
T d1utaa_ 12 SFRGAEQAETVRAQLA 27 (77)
T ss_dssp EESCHHHHHHHHHHHH
T ss_pred EecCHHHHHHHHHHHH
Confidence 4667777776665553
No 186
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=31.02 E-value=19 Score=18.98 Aligned_cols=46 Identities=11% Similarity=0.154 Sum_probs=27.8
Q ss_pred cCCCCCCHHHHHhhcc---cceEEEc--CCCCCCcceEEEEeCCHHHHHHH
Q 038175 4 CQVSDITNSILQETFS---RAKVTID--SNTGHTKGYGFVRFGDENERSRA 49 (155)
Q Consensus 4 nlp~~~te~~l~~~f~---~~~~~~~--~~~~~~~g~afv~f~~~~~a~~a 49 (155)
..+.+.++.+|++.++ ++.+..- ..+....--|||.+....+|...
T Consensus 27 ~V~~~A~K~~IK~AVe~lf~VkV~~Vnt~~~~~~~KkA~V~L~~~~~a~di 77 (81)
T d1vqos1 27 AVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEV 77 (81)
T ss_dssp EECTTCCHHHHHHHHHHHHCCCEEEEEEEECTTSSEEEEEEECTTSCHHHH
T ss_pred EEcCcCCHHHHHHHHHHHcCCceeEEEEeEcCCCcEEEEEEeCCCCcHHHH
Confidence 3478888888887777 3322221 11222234699999888776654
No 187
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=28.34 E-value=34 Score=16.86 Aligned_cols=55 Identities=18% Similarity=0.210 Sum_probs=40.6
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecC----HHHHHHHHHH
Q 038175 63 ATIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFAN----RKDAEVALQK 117 (155)
Q Consensus 63 ~~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~----~~~a~~a~~~ 117 (155)
.++.|.++.=.--...|+..+++.-.|..+.+....+-+.|+|+. .+....++..
T Consensus 4 ~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~ 62 (69)
T d2qifa1 4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIED 62 (69)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 356677766666667889999998889999998888899999853 3444455543
No 188
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=26.92 E-value=38 Score=21.79 Aligned_cols=30 Identities=27% Similarity=0.245 Sum_probs=22.2
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhccCCeEE
Q 038175 62 NATIFVGALDSNVSDKDLRELFSHFGEILS 91 (155)
Q Consensus 62 ~~~l~v~~l~~~~~~~~l~~~f~~~g~v~~ 91 (155)
.....|+|||+.++-.-|..++.....+..
T Consensus 90 ~~~~vvgNlPY~Iss~Il~~l~~~~~~~~~ 119 (252)
T d1qyra_ 90 QPLRVFGNLPYNISTPLMFHLFSYTDAIAD 119 (252)
T ss_dssp SCEEEEEECCTTTHHHHHHHHHTTGGGEEE
T ss_pred CCeEEEecchHHHHHHHHHHhcccccceeh
Confidence 445678999999999888887765544444
No 189
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=26.66 E-value=19 Score=18.45 Aligned_cols=18 Identities=0% Similarity=-0.007 Sum_probs=16.1
Q ss_pred cccCCCCCCHHHHHhhcc
Q 038175 2 GYCQVSDITNSILQETFS 19 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~ 19 (155)
|..|+.++|.++|+.-|.
T Consensus 8 vLgv~~~As~~eIk~aYr 25 (75)
T d1xbla_ 8 ILGVSKTAEEREIRKAYK 25 (75)
T ss_dssp TTCCSSSCCHHHHHHHHH
T ss_pred HcCCCCCcCHHHHHHHHH
Confidence 677899999999999988
No 190
>d1clia2 d.139.1.1 (A:171-345) Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.03 E-value=5.4 Score=24.67 Aligned_cols=50 Identities=12% Similarity=0.136 Sum_probs=36.4
Q ss_pred CCCHHHHHHHhhccCCeEEEEeeC--CCcEEEEEecCHHHHHHHHHHhcCCe
Q 038175 73 NVSDKDLRELFSHFGEILSVKIPV--GKGCGFVQFANRKDAEVALQKLQGTA 122 (155)
Q Consensus 73 ~~~~~~l~~~f~~~g~v~~~~~~~--~~g~~~v~f~~~~~a~~a~~~l~~~~ 122 (155)
.+....+.+.+++.|.|..-.+.+ +.|.+|+.+.+++.++++++.+...-
T Consensus 103 ~w~~P~iF~~i~~~g~vs~~EM~~tFNmGIGmvliV~~~~~~~v~~~l~~~g 154 (175)
T d1clia2 103 SWQWPEVFNWLQTAGNVEHHEMYRTFNCGVGMIIALPAPEVDKALALLNANG 154 (175)
T ss_dssp GCCCCHHHHHHHHHHTCCHHHHHHHCCTTEEEEEEECGGGHHHHHHHHHTTT
T ss_pred CCCCchHHHHHHHhCCccHhhHhheecCcceEEEEECHHHHHHHHHHHHHcC
Confidence 344445666777777766554443 58999999999999999998887553
No 191
>d1m1ha2 d.58.42.1 (A:5-50,A:132-186) N-utilization substance G protein NusG, N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=23.67 E-value=55 Score=17.76 Aligned_cols=52 Identities=10% Similarity=0.183 Sum_probs=37.1
Q ss_pred CCCCcceEEEEeCCHHHHHHHHHHhcCCCCCCCCcEEEEcCCCCCCCHHHHHHHhhc
Q 038175 29 TGHTKGYGFVRFGDENERSRAMIEMNGSDGKSNNATIFVGALDSNVSDKDLRELFSH 85 (155)
Q Consensus 29 ~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~l~v~~l~~~~~~~~l~~~f~~ 85 (155)
..-.+||-||...-.+++-..+....|-. .-|-.++-|..++++++..++++
T Consensus 47 ~klfPGYvfV~~~~~~~~~~~Ir~t~gV~-----~fvg~~~~P~pl~~~Ev~~il~~ 98 (101)
T d1m1ha2 47 NKIFPGYILIKAHMNDKLLMAIEKTPHVF-----RPVMVGGKPVPLKEEEVQNILNQ 98 (101)
T ss_dssp CSSSTTEEEEEECCCHHHHHHHHTSTTEE-----EECEETTEECEECHHHHHHHHHH
T ss_pred hhcCCCEEEEEEEeCchHHHHHhcCCCEE-----EecCCCCccCcCCHHHHHHHHHH
Confidence 34678999999998888888887655521 11112456777899999988875
No 192
>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}
Probab=23.15 E-value=30 Score=21.46 Aligned_cols=19 Identities=37% Similarity=0.576 Sum_probs=10.9
Q ss_pred CCCHHHHHHHhhccCCeEE
Q 038175 73 NVSDKDLRELFSHFGEILS 91 (155)
Q Consensus 73 ~~~~~~l~~~f~~~g~v~~ 91 (155)
..+-+..+..|.++|.+..
T Consensus 54 ~~~A~~w~~~l~~~G~llS 72 (190)
T d1k4na_ 54 NATAERWRRGFEQCGELLS 72 (190)
T ss_dssp HHHHHHHHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHHHhchhhh
Confidence 3344556666666666544
No 193
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.77 E-value=16 Score=18.75 Aligned_cols=18 Identities=0% Similarity=0.111 Sum_probs=15.5
Q ss_pred cccCCCCCCHHHHHhhcc
Q 038175 2 GYCQVSDITNSILQETFS 19 (155)
Q Consensus 2 v~nlp~~~te~~l~~~f~ 19 (155)
|.+||.+++.++|+.-|.
T Consensus 8 iLgv~~~as~~eIk~ay~ 25 (77)
T d1hdja_ 8 TLGLARGASDEEIKRAYR 25 (77)
T ss_dssp HHTCCTTCCHHHHHHHHH
T ss_pred HcCCCCCcCHHHHHHHHH
Confidence 457799999999999887
No 194
>d1nz8a_ d.58.42.1 (A:) N-utilization substance G protein NusG, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=21.96 E-value=64 Score=17.89 Aligned_cols=53 Identities=19% Similarity=0.246 Sum_probs=35.9
Q ss_pred CCcceEEEEeCCHH-----HHHHHHHHhcCCCCCCCCcEEEEcCCCCCCCHHHHHHHhhccCC
Q 038175 31 HTKGYGFVRFGDEN-----ERSRAMIEMNGSDGKSNNATIFVGALDSNVSDKDLRELFSHFGE 88 (155)
Q Consensus 31 ~~~g~afv~f~~~~-----~a~~a~~~~~~~~~~~~~~~l~v~~l~~~~~~~~l~~~f~~~g~ 88 (155)
..+||-||.+.-.+ ++-..+....|-..-... ++-|..++++++..+|+.-|-
T Consensus 60 lFPGYvfV~~~~~d~~~~~~~~~~Ir~t~gV~~fvg~-----~~~P~pv~~~Ei~~il~~~g~ 117 (119)
T d1nz8a_ 60 LFPGYLFIQMDLGDEEEPNEAWEVVRGTPGITGFVGA-----GMRPVPLSPDEVRHILEVSGL 117 (119)
T ss_dssp SSTTEEEEEECCCSSSSCCHHHHHHHHSTTCCCCCCS-----SSSSCBCCHHHHHHHHHHHTS
T ss_pred cCCcEEEEEEecCccccchhhHHHHhcCCCeeEEcCC-----CCccccCCHHHHHHHHHHhCc
Confidence 36899999996432 455567766663222221 346888999999999988773
No 195
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.75 E-value=51 Score=16.25 Aligned_cols=54 Identities=13% Similarity=0.267 Sum_probs=36.6
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEeeCCCcEEEEEecC----HHHHHHHHHH
Q 038175 64 TIFVGALDSNVSDKDLRELFSHFGEILSVKIPVGKGCGFVQFAN----RKDAEVALQK 117 (155)
Q Consensus 64 ~l~v~~l~~~~~~~~l~~~f~~~g~v~~~~~~~~~g~~~v~f~~----~~~a~~a~~~ 117 (155)
+|.|.++.=..-...|+..+.....|..+.+....+.+.|.|+. .+....+++.
T Consensus 6 ~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~ 63 (72)
T d2aw0a_ 6 VINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIED 63 (72)
T ss_dssp EEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 45555555555566788888888778888887778888888843 3444555554
No 196
>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.08 E-value=59 Score=16.75 Aligned_cols=29 Identities=14% Similarity=0.075 Sum_probs=22.4
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhccCCe
Q 038175 61 NNATIFVGALDSNVSDKDLRELFSHFGEI 89 (155)
Q Consensus 61 ~~~~l~v~~l~~~~~~~~l~~~f~~~g~v 89 (155)
.+.++++.+.....+.++|+.+...+|..
T Consensus 5 ~g~~i~~~g~~~~~~~~~L~~li~~~GG~ 33 (102)
T d1t15a2 5 RGLEICCYGPFTNMPTDQLEWMVQLCGAS 33 (102)
T ss_dssp TTCEEEECSCCSSSCHHHHHHHHHHTTCE
T ss_pred CCcEEEEeCCCCCcCHHHHHHHHHHhCCE
Confidence 45678887754567889999999999864
Done!