Your job contains 1 sequence.
>038179
MHWMAFTQHGRNALRQITKESSDRVLHHPLLFSCQGVRYRRWNLDLLTNQPKVDKLGKAG
ETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKSEDNMSREF
EKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQLSISIEPEN
LHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNVKVRGK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038179
(221 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2168377 - symbol:AT5G53070 species:3702 "Arabi... 650 9.7e-64 1
TIGR_CMR|NSE_0060 - symbol:NSE_0060 "ribosomal protein L9... 85 2.5e-05 2
TIGR_CMR|GSU_0668 - symbol:GSU_0668 "ribosomal protein L9... 102 0.00025 1
>TAIR|locus:2168377 [details] [associations]
symbol:AT5G53070 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000244 Pfam:PF01281
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 KO:K02939 Gene3D:3.10.430.100 Gene3D:3.40.5.10
InterPro:IPR009027 InterPro:IPR020069 InterPro:IPR020070
PANTHER:PTHR21368 Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653
EMBL:AB018116 eggNOG:NOG277901 UniGene:At.27262 EMBL:BT002884
EMBL:BT004396 IPI:IPI00519351 RefSeq:NP_200119.1
ProteinModelPortal:Q9LVU5 SMR:Q9LVU5 PaxDb:Q9LVU5 PRIDE:Q9LVU5
EnsemblPlants:AT5G53070.1 GeneID:835387 KEGG:ath:AT5G53070
TAIR:At5g53070 HOGENOM:HOG000006313 InParanoid:Q9LVU5 OMA:PGYFRNH
PhylomeDB:Q9LVU5 ProtClustDB:CLSN2686155 ArrayExpress:Q9LVU5
Genevestigator:Q9LVU5 Uniprot:Q9LVU5
Length = 221
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 124/223 (55%), Positives = 170/223 (76%)
Query: 4 MAFTQHGRNALRQITKESS-----DRVLHHPLLFSCQGVRYRRWNLDLLTNQPKVDKLGK 58
MA+ RN +R + + + +HHPLLF+CQGVRYR+ + L T ++KLGK
Sbjct: 1 MAYVGQSRNVIRHVVSRGTAYHKYENAIHHPLLFACQGVRYRKLEVILTTG---IEKLGK 57
Query: 59 AGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVE-EEKVKVIRKSEDNMS 117
AGETVKVAPGYFRNHLMPKLLAVPNI+K+A+LIR+QR++ E +E+VKV+ K+ + +
Sbjct: 58 AGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIREQRKMYNHEEVKEEVKVVHKTSEVQT 117
Query: 118 REFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQLSISIE 177
+E+EKAA+RL NA LVLR+ + EK ++R+SKDD ++++P+TKEE+V+EVARQL + I+
Sbjct: 118 KEYEKAAKRLANANLVLRKLVDKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKID 177
Query: 178 PENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNVKVRG 220
P+N+ L +PL FGEYEVP++ PK IPLP+G VQW L VKVRG
Sbjct: 178 PDNVVLAAPLETFGEYEVPLKFPKTIPLPQGTVQWILKVKVRG 220
>TIGR_CMR|NSE_0060 [details] [associations]
symbol:NSE_0060 "ribosomal protein L9" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
HAMAP:MF_00503 InterPro:IPR000244 InterPro:IPR020594 Pfam:PF01281
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
EMBL:CP000237 GenomeReviews:CP000237_GR eggNOG:COG0359
HOGENOM:HOG000040337 KO:K02939 OMA:GKQIFGS Gene3D:3.10.430.100
Gene3D:3.40.5.10 InterPro:IPR009027 InterPro:IPR020069
InterPro:IPR020070 PANTHER:PTHR21368 Pfam:PF03948 SUPFAM:SSF55658
SUPFAM:SSF55653 TIGRFAMs:TIGR00158 PROSITE:PS00651
RefSeq:YP_505961.1 ProteinModelPortal:Q2GEY5 STRING:Q2GEY5
GeneID:3931413 KEGG:nse:NSE_0060 PATRIC:22680235
ProtClustDB:CLSK2527628 BioCyc:NSEN222891:GHFU-97-MONOMER
Uniprot:Q2GEY5
Length = 160
Score = 85 (35.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 24/83 (28%), Positives = 47/83 (56%)
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E++ + + A LE A + + F+ I+ L A + + L V+ +++VAE++++
Sbjct: 48 ENSKEKLAAQQAAELETASELAKSFTEIDVLPIYAQAERGV-LFGAVSAKQVVAELSKK- 105
Query: 173 SISIEPENLHLPSPLSAFGEYEV 195
I I +N+ L +P+ A GE+EV
Sbjct: 106 GIEITTKNVVLGAPIKALGEHEV 128
Score = 65 (27.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 55 KLGKAGETVKVAPGYFRNHLMPKLLAV 81
KLG G+ +KV G+ RN+L+P AV
Sbjct: 11 KLGNVGDVLKVKKGFARNYLIPSGKAV 37
>TIGR_CMR|GSU_0668 [details] [associations]
symbol:GSU_0668 "ribosomal protein L9" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00503
InterPro:IPR000244 InterPro:IPR020594 Pfam:PF01281 GO:GO:0006412
GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
GO:GO:0019843 eggNOG:COG0359 HOGENOM:HOG000040337 KO:K02939
Gene3D:3.10.430.100 Gene3D:3.40.5.10 InterPro:IPR009027
InterPro:IPR020069 InterPro:IPR020070 PANTHER:PTHR21368
Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653 TIGRFAMs:TIGR00158
PROSITE:PS00651 ProtClustDB:PRK00137 OMA:TGIYEIE RefSeq:NP_951725.1
ProteinModelPortal:Q74FE1 GeneID:2685560 KEGG:gsu:GSU0668
PATRIC:22024095 BioCyc:GSUL243231:GH27-687-MONOMER Uniprot:Q74FE1
Length = 148
Score = 102 (41.0 bits), Expect = 0.00025, P = 0.00025
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V+ LG G+ VKVAPGY RN+L+P+ A+ EK A + +R +E ++ KV+ ++
Sbjct: 9 VENLGHIGDIVKVAPGYARNYLIPRNFAIEATEKNAKALEHAKR---QLEYKRNKVLEQA 65
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 221 221 0.00095 112 3 11 22 0.38 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 596 (63 KB)
Total size of DFA: 172 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.44u 0.09s 24.53t Elapsed: 00:00:03
Total cpu time: 24.44u 0.09s 24.53t Elapsed: 00:00:03
Start: Mon May 20 17:09:35 2013 End: Mon May 20 17:09:38 2013