BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038179
(221 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3A320|RL9_PELCD 50S ribosomal protein L9 OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=rplI PE=3 SV=1
Length = 148
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 31/155 (20%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
VD LG+ G+ VKV PGY RN L+P +KFA + R + +E +K
Sbjct: 9 VDGLGQIGDLVKVKPGYARNFLIP--------QKFA--VEANTRNIKELEHQK------- 51
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRS----RASKDDPIELRSPVTKEELVAEV 168
R+ E A+++ A V++ + IEK+ RA D +L VT E+ A++
Sbjct: 52 -----RQLEHKAQKVLQASEVVK--AQIEKVTCEFALRAGDDG--KLFGSVTSMEIQAKL 102
Query: 169 ARQLSISIEPENLHLPSPLSAFGEYEVPMRLPKAI 203
A + ++ + + L P+ A GEYEV ++LP I
Sbjct: 103 AES-GVEVDRKKIQLDEPIKALGEYEVAVKLPAGI 136
>sp|A1AM21|RL9_PELPD 50S ribosomal protein L9 OS=Pelobacter propionicus (strain DSM
2379) GN=rplI PE=3 SV=1
Length = 151
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
+D LG G+ VKVAPGY RN+L+PK LAV EK A + +R
Sbjct: 9 IDTLGHIGDIVKVAPGYARNYLLPKGLAVEATEKNAKALEHVKR---------------- 52
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIE-KLRSRASKDDPIELRSPVTKEELVAEVARQ 171
M+ +K + A+L+L + I +L +A + +L VT E +A ++
Sbjct: 53 --QMAYRKDKVTQA---AKLLLAKLEGITVELVHQAGVEG--KLFGSVTNME-IAAFLKE 104
Query: 172 LSISIEPENLHLPSPLSAFGEYEVPMRL 199
+ I+ + + L P+ GEY VP++L
Sbjct: 105 KGVDIDRKKIALAEPIKQVGEYSVPVKL 132
>sp|Q9ZEA4|RL9_RICPR 50S ribosomal protein L9 OS=Rickettsia prowazekii (strain Madrid E)
GN=rplI PE=3 SV=1
Length = 171
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 22/147 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK G+ +KVA G+ RN+L+P+ LA+ + LI KQ+ EEK K +R+
Sbjct: 9 VRKLGKIGDILKVADGFGRNYLLPQKLAIRATKSNKELIVKQKYEF----EEKDKQVRE- 63
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E EK +++ +LV R ++ D +L VT +++ ++++ +
Sbjct: 64 ------EVEKINTIIKDQQLVFIRQTS-----------DDCKLFGSVTNKDIADKLSKNI 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
S +I N+ L + + G Y V +RL
Sbjct: 107 SYNISHSNIILDKQIKSTGIYTVEIRL 133
>sp|Q01QR6|RL9_SOLUE 50S ribosomal protein L9 OS=Solibacter usitatus (strain Ellin6076)
GN=rplI PE=3 SV=1
Length = 148
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 23/151 (15%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
++ LG G+ VKVAPGY RN L+PK +AV E R+I VE+E+ +RK
Sbjct: 9 IENLGTRGQLVKVAPGYARNFLLPKRMAVAATE-------ANRKI---VEQERQAHLRK- 57
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E + E E+ A+ + + ++ +A ++D +L VT +++ + Q
Sbjct: 58 ETKIKGEAEELAKIMTGVTV---------RISQKAGEND--QLFGSVTSKDIADALTAQ- 105
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRLPKAI 203
+ +I+ + L P+ GE+++P+RL K +
Sbjct: 106 NYNIDRRKIQLDEPIKTLGEFKIPVRLYKDV 136
>sp|A8GLX8|RL9_RICAH 50S ribosomal protein L9 OS=Rickettsia akari (strain Hartford)
GN=rplI PE=3 SV=1
Length = 171
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 22/147 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK G+ +KVA G+ RN+L+P+ LA+ E LI KQ+ E K K IR+
Sbjct: 9 VRKLGKIGDMLKVADGFGRNYLLPQKLAIRATEPNKELIVKQKHEF----EAKDKQIRE- 63
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E EK +++ +LV R +AS D +L VT +E+ ++++ +
Sbjct: 64 ------EVEKINALIKDQKLVFIR---------QASDDG--KLFGSVTNKEIADKLSKNV 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
S +I N+ L + + G Y V +RL
Sbjct: 107 SYNISHSNIILDKQIKSTGVYTVEIRL 133
>sp|Q1XDF2|RK9_PORYE 50S ribosomal protein L9, chloroplastic OS=Porphyra yezoensis
GN=rpl9 PE=3 SV=1
Length = 155
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 24/148 (16%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMP-KLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRK 111
+ KLGK+ + +KVA GY RN L+P K+ AV + I KQ++ + EEK+K +
Sbjct: 14 IQKLGKSNDVIKVASGYARNFLIPNKMAAVA-----TNGILKQQKFYAAIREEKLKTAK- 67
Query: 112 SEDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQ 171
ENA+ V + I++ D + VT++E+ +
Sbjct: 68 ----------------ENAKKVKQLLEEIQRFSVSKKTGDGHNIFGSVTEKEISQIIKNT 111
Query: 172 LSISIEPENLHLPSPLSAFGEYEVPMRL 199
+I IE +++ LP + G Y+V ++L
Sbjct: 112 TNIDIEKQSISLPD-VKTIGIYDVEIKL 138
>sp|A8F0E7|RL9_RICM5 50S ribosomal protein L9 OS=Rickettsia massiliae (strain Mtu5)
GN=rplI PE=3 SV=1
Length = 171
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK G+ +KVA G+ RN+L+P+ LA+ E LI KQ+ E K K IR+
Sbjct: 9 VRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQKHEF----EAKDKQIRE- 63
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E EK +++ +LV R + DD +L VT +E+ +++ +
Sbjct: 64 ------EVEKINALIKDQKLVF----------IRQTSDDG-KLFGSVTNKEIADKLSENV 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
S +I N+ L + + G Y V +RL
Sbjct: 107 SYNISHSNIILDKQIKSTGIYTVEIRL 133
>sp|Q68XR7|RL9_RICTY 50S ribosomal protein L9 OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=rplI PE=3 SV=1
Length = 171
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK G+ +KVA G+ RN+L+P+ LA+ + LI KQ+ E K K IR
Sbjct: 9 VRKLGKIGDILKVANGFGRNYLLPQKLAIRATKSNKELIVKQKHEF----EAKDKQIRA- 63
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E EK +++ +LV R ++ D +L VT +++ ++++ +
Sbjct: 64 ------EVEKINTLIKDQQLVFIRQTS-----------DDCKLFGSVTNKDIADKLSKNI 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
S +I N+ L + + G Y V +RL
Sbjct: 107 SYNISHSNVILDKQIKSTGIYTVEIRL 133
>sp|C4K161|RL9_RICPU 50S ribosomal protein L9 OS=Rickettsia peacockii (strain Rustic)
GN=rplI PE=3 SV=1
Length = 171
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK G+ +KVA G+ RN+L+P+ LA+ E LI KQ+ E K K IR+
Sbjct: 9 VRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQKHEF----EAKDKQIRE- 63
Query: 113 EDNMSREFEKAARRLENARLV-LRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQ 171
E EK +++ +LV +R+ SN K L VT +E+ +++
Sbjct: 64 ------EVEKINALIKDQQLVFIRQTSNDGK------------LFGSVTNKEIADKLSEN 105
Query: 172 LSISIEPENLHLPSPLSAFGEYEVPMRL 199
+S +I N+ L + + G Y V +RL
Sbjct: 106 ISYNISHSNIILDKQIKSTGIYTVEIRL 133
>sp|Q92JK1|RL9_RICCN 50S ribosomal protein L9 OS=Rickettsia conorii (strain ATCC VR-613
/ Malish 7) GN=rplI PE=3 SV=1
Length = 171
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK G+ +KVA G+ RN+L+P+ LA+ E LI KQ+ E K K IR+
Sbjct: 9 VRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQKHEF----EAKDKQIRE- 63
Query: 113 EDNMSREFEKAARRLENARLV-LRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQ 171
E EK +++ +LV +R+ SN K L VT +E+ +++
Sbjct: 64 ------EVEKINALIKDQQLVFIRQTSNDGK------------LFGSVTNKEIADKLSEN 105
Query: 172 LSISIEPENLHLPSPLSAFGEYEVPMRL 199
+S +I N+ L + + G Y V +RL
Sbjct: 106 ISYNISHSNIILDKQIKSTGIYTVEIRL 133
>sp|Q72GV5|RL9_THET2 50S ribosomal protein L9 OS=Thermus thermophilus (strain HB27 /
ATCC BAA-163 / DSM 7039) GN=rplI PE=1 SV=1
Length = 148
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 38/169 (22%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAV----PNIEKFAHLIRKQ-RRICQPVEEEKVK 107
++ LG G+ V V PGY RN+L+P+ LAV N++ IR Q +R+ +
Sbjct: 9 LENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEARIRAQAKRLAE-------- 60
Query: 108 VIRKSEDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAE 167
RK+E +E LEN L + +R+ +K + VT +++
Sbjct: 61 --RKAEAERLKEI------LENLTLTI-------PVRAGETK-----IYGSVTAKDIAEA 100
Query: 168 VARQLSISIEPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNV 216
++RQ I+I+P+ L L P+ GEY + + P PE +Q ++V
Sbjct: 101 LSRQHGITIDPKRLALEKPIKELGEYVLTYK-----PHPEVPIQLKVSV 144
>sp|C3PM74|RL9_RICAE 50S ribosomal protein L9 OS=Rickettsia africae (strain ESF-5)
GN=rplI PE=3 SV=1
Length = 171
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK G+ +KVA G+ RN+L+P+ LA+ E LI KQ+ E K K IR+
Sbjct: 9 VRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQKHEF----EAKDKQIRE- 63
Query: 113 EDNMSREFEKAARRLENARLV-LRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQ 171
E EK +++ +LV +R+ SN K L VT +E+ +++
Sbjct: 64 ------EVEKINALIKDQQLVFIRQTSNDGK------------LFGSVTNKEVADKLSEN 105
Query: 172 LSISIEPENLHLPSPLSAFGEYEVPMRL 199
+S +I N+ L + + G Y V +RL
Sbjct: 106 ISYNISHSNIILDKQIKSTGIYTVEIRL 133
>sp|A8GQJ6|RL9_RICRS 50S ribosomal protein L9 OS=Rickettsia rickettsii (strain Sheila
Smith) GN=rplI PE=3 SV=1
Length = 171
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK G+ +KVA G+ RN+L+P+ LA+ E LI KQ+ E K K IR+
Sbjct: 9 VRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQKHEF----EAKDKQIRE- 63
Query: 113 EDNMSREFEKAARRLENARLV-LRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQ 171
E EK +++ +LV +R+ SN K L VT +E+ +++
Sbjct: 64 ------EVEKINALIKDQQLVFIRQTSNDGK------------LFGSVTNKEIANKLSEN 105
Query: 172 LSISIEPENLHLPSPLSAFGEYEVPMRL 199
+S +I N+ L + + G Y V +RL
Sbjct: 106 ISYNISHSNVILDKQIKSTGIYTVEIRL 133
>sp|B0BVY2|RL9_RICRO 50S ribosomal protein L9 OS=Rickettsia rickettsii (strain Iowa)
GN=rplI PE=3 SV=1
Length = 171
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK G+ +KVA G+ RN+L+P+ LA+ E LI KQ+ E K K IR+
Sbjct: 9 VRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQKHEF----EAKDKQIRE- 63
Query: 113 EDNMSREFEKAARRLENARLV-LRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQ 171
E EK +++ +LV +R+ SN K L VT +E+ +++
Sbjct: 64 ------EVEKINALIKDQQLVFIRQTSNDGK------------LFGSVTNKEIANKLSEN 105
Query: 172 LSISIEPENLHLPSPLSAFGEYEVPMRL 199
+S +I N+ L + + G Y V +RL
Sbjct: 106 ISYNISHSNVILDKQIKSTGIYTVEIRL 133
>sp|Q4UN66|RL9_RICFE 50S ribosomal protein L9 OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=rplI PE=3 SV=1
Length = 171
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK G+ +KVA G+ RN+L+P+ LA+ E LI KQ+ E K K IR+
Sbjct: 9 VRKLGKIGDMLKVADGFGRNYLLPQKLAIRATEPNKELIVKQKHEF----EAKDKQIRE- 63
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E EK +++ +LV R + DD +L VT +E+ +++ +
Sbjct: 64 ------EVEKINALIKDQKLVF----------IRQTSDDG-KLFGSVTNKEIADKLSENV 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
S +I N+ L + G Y V +RL
Sbjct: 107 SYNIAHSNIILDKQIKFTGIYTVEIRL 133
>sp|Q2LUJ5|RL9_SYNAS 50S ribosomal protein L9 OS=Syntrophus aciditrophicus (strain SB)
GN=rplI PE=3 SV=1
Length = 149
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 23/150 (15%)
Query: 54 DKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKSE 113
+ LGKAGE VKVA GY RN L+PK +A A+L R + +E +K ++RK+E
Sbjct: 10 ETLGKAGEIVKVADGYARNFLIPKGIAAE-----ANL-----RNIKALEHDKQNIVRKAE 59
Query: 114 DNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQLS 173
R AA + RR +KL + D +E L+A+ +
Sbjct: 60 KERKRHESLAASLSGVTCTIARRVGEQDKLFGSVTAMD--------IEEALLAQ-----N 106
Query: 174 ISIEPENLHLPSPLSAFGEYEVPMRLPKAI 203
+ I+ +++ L P+ A GE+ + ++L +
Sbjct: 107 VKIDRKSIVLDEPIKAIGEFPIVIKLGAGV 136
>sp|Q5SLQ1|RL9_THET8 50S ribosomal protein L9 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=rplI PE=1 SV=1
Length = 148
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 38/169 (22%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAV----PNIEKFAHLIRKQ-RRICQPVEEEKVK 107
++ LG G+ V V PGY RN+L+P+ LAV N++ IR Q +R+ +
Sbjct: 9 LENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEARIRAQAKRLAE-------- 60
Query: 108 VIRKSEDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAE 167
RK+E +E LEN L + +R+ +K + VT +++
Sbjct: 61 --RKAEAERLKEI------LENLTLTI-------PVRAGETK-----IYGSVTAKDIAEA 100
Query: 168 VARQLSISIEPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNV 216
++RQ ++I+P+ L L P+ GEY + + P PE +Q ++V
Sbjct: 101 LSRQHGVTIDPKRLALEKPIKELGEYVLTYK-----PHPEVPIQLKVSV 144
>sp|A4XJI0|RL9_CALS8 50S ribosomal protein L9 OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=rplI PE=3 SV=1
Length = 148
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 22/151 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V LGK V+V GY RN+L+P+ LA P E I++++ Q +E+++ + +
Sbjct: 9 VKGLGKKDSIVEVNDGYARNYLIPRKLAAPLTEGLEKHIKEKKEAEQKKKEKELMLAKDL 68
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
D +LE ++++++ ++A ++ +L +T +E+ E+ RQL
Sbjct: 69 AD-----------KLEKSQVIIK---------AKAGENG--KLFGSITNKEIADEIKRQL 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRLPKAI 203
I ++ + + L P+ G YEV +RL + I
Sbjct: 107 GIDMDKKKIELEDPIKQIGSYEVSIRLYQGI 137
>sp|Q2RM68|RL9_MOOTA 50S ribosomal protein L9 OS=Moorella thermoacetica (strain ATCC
39073) GN=rplI PE=3 SV=1
Length = 150
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 24/148 (16%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLG G V+V+ GY RN+L+P+ LAV E +++
Sbjct: 9 VAKLGNRGTLVEVSEGYARNYLLPRGLAV---------------------EATAGRLKEL 47
Query: 113 EDNMSREFEKAARRLENARLVLRRFSN-IEKLRSRASKDDPIELRSPVTKEELVAEVARQ 171
+ R +K + LENAR R + K+ +RA + +L VT +E+ +
Sbjct: 48 DLEKKRREKKENQELENARRQAARLDGAVVKITTRAGETG--KLFGSVTNKEIAEAIKNT 105
Query: 172 LSISIEPENLHLPSPLSAFGEYEVPMRL 199
IS++ + L P+ A G YEV ++L
Sbjct: 106 FQISLDRRKIDLKEPIKALGSYEVTLKL 133
>sp|P27151|RL9_THETH 50S ribosomal protein L9 OS=Thermus thermophilus GN=rplI PE=1 SV=3
Length = 148
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 38/169 (22%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAV----PNIEKFAHLIRKQ-RRICQPVEEEKVK 107
++ LG G+ V V PGY RN+L+P+ LAV N++ IR Q +R+ +
Sbjct: 9 LENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEARIRAQAKRLAE-------- 60
Query: 108 VIRKSEDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAE 167
RK+ E E+ + LEN L + +R+ +K + VT +++
Sbjct: 61 --RKA------EAERLKKILENLTLTI-------PVRAGETK-----IYGSVTAKDIAEA 100
Query: 168 VARQLSISIEPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNV 216
++RQ ++I+P+ L L P+ GEY + + P PE +Q ++V
Sbjct: 101 LSRQHGVTIDPKRLALEKPIKELGEYVLTYK-----PHPEVPIQLKVSV 144
>sp|A8EXA9|RL9_RICCK 50S ribosomal protein L9 OS=Rickettsia canadensis (strain McKiel)
GN=rplI PE=3 SV=1
Length = 171
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK G+ +KVA G+ RN+L+P+ LA+ E LI KQ+ E K K IR+
Sbjct: 9 VRKLGKIGDILKVADGFGRNYLLPQKLAIRATEPNKELIVKQKHEF----EAKDKQIRE- 63
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E EK ++ +LV R + DD +L +T +E+ +++ +
Sbjct: 64 ------EVEKINALIKEQKLVF----------IRQTSDDG-KLFGSITNKEIADKLSENV 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
S +I N+ L + + G Y V +RL
Sbjct: 107 SYNIFHSNIILDKKIKSTGIYTVEIRL 133
>sp|Q3AG23|RL9_CARHZ 50S ribosomal protein L9 OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=rplI PE=3 SV=1
Length = 151
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 22/149 (14%)
Query: 51 PKVDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIR 110
+V KLGK G+ V+VA GY RN+L+ K LAV E K+K ++
Sbjct: 7 TEVKKLGKKGDVVEVAEGYGRNYLIAKGLAVEATEG------------------KLKELQ 48
Query: 111 KSEDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVAR 170
+ ++ +R EK L+ AR + + NIE L + +L +T +++ + +
Sbjct: 49 QQKEAANRRKEK---ELQEARSLAEKLKNIE-LVLYGKGGENGKLFGAITSKDIAEALEK 104
Query: 171 QLSISIEPENLHLPSPLSAFGEYEVPMRL 199
I I+ L L + A G Y V ++L
Sbjct: 105 NYQIKIDKRKLDLKENIKALGVYTVEVKL 133
>sp|B5YIM4|RL9_THEYD 50S ribosomal protein L9 OS=Thermodesulfovibrio yellowstonii
(strain ATCC 51303 / DSM 11347 / YP87) GN=rplI PE=3 SV=1
Length = 147
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 77/148 (52%), Gaps = 25/148 (16%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V LG+AG+T+ V GY RN+L+P+ LA+ EK ++ Q++ +
Sbjct: 9 VHGLGRAGQTINVKDGYARNYLLPRGLALIADEKNLKVLEYQKKKFE------------- 55
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIE-KLRSRASKDDPIELRSPVTKEELVAEVARQ 171
E+A ++ ++A + R S +E ++++A +D L +T ++ +AE+ ++
Sbjct: 56 --------EQAKKKRQDAESIAERLSALELTIKAKAGEDQK--LFGSITAKD-IAELLQK 104
Query: 172 LSISIEPENLHLPSPLSAFGEYEVPMRL 199
++ + +++ P+ GE+EV ++L
Sbjct: 105 EGFLVDKKQINISEPIKRVGEHEVEVKL 132
>sp|C4ZDL0|RL9_EUBR3 50S ribosomal protein L9 OS=Eubacterium rectale (strain ATCC 33656
/ VPI 0990) GN=rplI PE=3 SV=1
Length = 148
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 28/147 (19%)
Query: 56 LGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKSEDN 115
LGK GE V V+ GY RN+++PK L V K + ++ Q + V +E
Sbjct: 12 LGKKGEIVNVSDGYARNNIIPKKLGVEATPKNLNDLKLQNQHADKVAQE----------- 60
Query: 116 MSREFEKA---ARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
+E A A+ +EN ++V++ S E R+ S ++ +E+ A Q
Sbjct: 61 ---NYESALALAKVVENTKVVVKLRSG-EGGRTFGS----------ISTKEISAAAKEQH 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
+ ++ + + L + A G YEVP++L
Sbjct: 107 GLELDKKKMQLNESIKALGNYEVPVKL 133
>sp|A0LN56|RL9_SYNFM 50S ribosomal protein L9 OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=rplI PE=3 SV=1
Length = 148
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 25/156 (16%)
Query: 56 LGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKSEDN 115
LG+ G+ V VAPGY RN+L P+ LA+ K + ++R+ + EK++
Sbjct: 12 LGQIGQVVNVAPGYARNYLFPQGLALEATGKNVKELDHRKRVL-AAKREKIR-------- 62
Query: 116 MSREFEKAARRLENARLVLRR-FSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQLSI 174
+E A ++ +LVLRR ++ +KL S D ++S + + + VAR+
Sbjct: 63 --QEMLSVAEKINQVKLVLRRKVADEDKLYGSVSAAD---IQSALEERGFI--VARK--- 112
Query: 175 SIEPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKV 210
++ L P+ GE+ V +R+ I G V
Sbjct: 113 -----DIQLDQPIKQLGEFTVSVRVDAQIAATVGVV 143
>sp|B3E6H6|RL9_GEOLS 50S ribosomal protein L9 OS=Geobacter lovleyi (strain ATCC BAA-1151
/ DSM 17278 / SZ) GN=rplI PE=3 SV=1
Length = 147
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 23/147 (15%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
++ LG+ G+ VKVAPGY RN+L+PK LA+ EK A + +R
Sbjct: 9 IEHLGQIGDIVKVAPGYARNYLLPKGLAIEATEKNAKALEHAKR---------------- 52
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
+ K + LE A+ ++ + + + + + ++ +L VT E +A +
Sbjct: 53 -----QLAYKKNKSLEAAKNLVAKLEALSIVLTHQAGEEG-KLFGSVTNME-IAAFLKDN 105
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
+ I+ + + L P+ GEY VP+++
Sbjct: 106 GLEIDRKKIVLAEPIKQLGEYSVPVKV 132
>sp|Q7M8Z5|RL9_WOLSU 50S ribosomal protein L9 OS=Wolinella succinogenes (strain ATCC
29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)
GN=rplI PE=3 SV=1
Length = 150
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 26/159 (16%)
Query: 46 LLTNQPKVDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEK 105
LLT + V LGKAGE +V GY RN L+ K +A E
Sbjct: 4 LLTKE--VKGLGKAGEIHEVKDGYGRNFLVGKGMA---------------------EIAT 40
Query: 106 VKVIRKSEDNMSREFEKAARRLENARLVLRRFSNIE-KLRSRASKDDPIELRSPVTKEEL 164
+VI + + R EK A+ LE + V + +++ K+ + + L +TKE+L
Sbjct: 41 NEVINRWKAEQKRRAEKEAQELERLKNVAKELASVTLKIVQKVGANGS--LYGAITKEDL 98
Query: 165 VAEVARQLSISIEPENLHLPSPLSAFGEYEVPMRLPKAI 203
A + Q I ++ ++ L +P+ + G YE+ ++L I
Sbjct: 99 SAALMAQKGIEVDKKSFELKTPIKSTGIYEIEVKLGHGI 137
>sp|C6E506|RL9_GEOSM 50S ribosomal protein L9 OS=Geobacter sp. (strain M21) GN=rplI PE=3
SV=1
Length = 147
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 30/166 (18%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
VD LG G+ VKVAPGY RN L+PK A+ EK A + +R +E +K KV+ +
Sbjct: 9 VDNLGHIGDIVKVAPGYARNFLLPKGFAIEATEKNAKALEHAKR---HLEYKKNKVLEAA 65
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
++ A ++E L + +A DD L VT EL AE +
Sbjct: 66 --------KQLAAKIEGLSL---------SIAHQAGADD--RLFGAVTNMEL-AEQLKAN 105
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNVKV 218
I ++ + + L P+ G++ +++ PE V TL V V
Sbjct: 106 GIEVDRKRIVLAEPIKQLGDFTATVKIH-----PE--VSATLKVAV 144
>sp|B5EHW6|RL9_GEOBB 50S ribosomal protein L9 OS=Geobacter bemidjiensis (strain Bem /
ATCC BAA-1014 / DSM 16622) GN=rplI PE=3 SV=1
Length = 147
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 30/166 (18%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
VD LG G+ VKVAPGY RN L+PK A+ EK A + +R +E +K KV+ +
Sbjct: 9 VDNLGHIGDIVKVAPGYARNFLLPKGFAIEATEKNAKALEHAKR---HLEYKKNKVLEAA 65
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
++ A ++E L + +A DD L VT EL AE +
Sbjct: 66 --------KQLAAKIEGLSL---------SIAHQAGADD--RLFGAVTNMEL-AEQLKAN 105
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNVKV 218
I ++ + + L P+ G++ +++ PE V TL V V
Sbjct: 106 GIEMDRKRIVLAEPIKQLGDFTATVKIH-----PE--VSATLKVAV 144
>sp|A8GY14|RL9_RICB8 50S ribosomal protein L9 OS=Rickettsia bellii (strain OSU 85-389)
GN=rplI PE=3 SV=1
Length = 173
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK GE KVA G+ RN+L+P+ LA+ E LI KQ+ EEK K I+
Sbjct: 9 VRKLGKIGEIHKVADGFGRNYLLPQKLAIRATELNKELIVKQKHEL----EEKDKQIK-- 62
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E K +++ +L+ R + DD +L V +E+ ++++ +
Sbjct: 63 -----SEITKINDLIKDQKLIF----------VRQTSDDG-KLFGSVNNKEIAKKLSQAV 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
S I N+ L + + + G Y+V +RL
Sbjct: 107 SYPISHLNIILDTQIKSTGIYKVEVRL 133
>sp|Q74FE1|RL9_GEOSL 50S ribosomal protein L9 OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=rplI PE=3 SV=1
Length = 148
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 25/148 (16%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V+ LG G+ VKVAPGY RN+L+P+ A+ EK A K+
Sbjct: 9 VENLGHIGDIVKVAPGYARNYLIPRNFAIEATEKNA----------------------KA 46
Query: 113 EDNMSREFE-KAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQ 171
++ R+ E K + LE ARL++ + + S + ++ +L VT EL AE+ +
Sbjct: 47 LEHAKRQLEYKRNKVLEQARLLVAKIEGLSLSISHQAGEEG-KLFGSVTNMEL-AELLKA 104
Query: 172 LSISIEPENLHLPSPLSAFGEYEVPMRL 199
+ I+ + + L P+ GE+ +++
Sbjct: 105 QGVEIDRKKIVLAEPIKHVGEFTAVVKV 132
>sp|Q1RKB3|RL9_RICBR 50S ribosomal protein L9 OS=Rickettsia bellii (strain RML369-C)
GN=rplI PE=3 SV=1
Length = 173
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V KLGK GE KVA G+ RN+L+P+ LA+ E LI KQ+ EEK K I+
Sbjct: 9 VRKLGKIGEIHKVADGFGRNYLLPQKLAIRATELNKELIVKQKHEL----EEKDKQIK-- 62
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E K +++ +L+ R + DD +L V +E+ ++++ +
Sbjct: 63 -----SEITKINDLIKDQKLIF----------VRQTSDDG-KLFGSVNNKEIAEKLSQAV 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
S I N+ L + + + G Y+V +RL
Sbjct: 107 SYPISHLNIILDTQIKSTGIYKVEVRL 133
>sp|Q8KAM4|RL9_CHLTE 50S ribosomal protein L9 OS=Chlorobium tepidum (strain ATCC 49652 /
DSM 12025 / TLS) GN=rplI PE=3 SV=1
Length = 152
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 23/147 (15%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V LG AGE V V GY N+L+P+ + IR + +E EK + RK
Sbjct: 9 VATLGDAGEVVTVKNGYANNYLIPQ----------GYAIRATEGTLKALETEKKQQARKI 58
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E + E AA+ + VL + KL + D +AE +
Sbjct: 59 ELQRTNARELAAKIEQMTLKVLAKAGESGKLFGTVTAGD-------------IAEALKAQ 105
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
+ I+ +HL +P+ A G+YE +L
Sbjct: 106 GVDIDRRKIHLEAPIKALGKYEADAKL 132
>sp|B9M5V1|RL9_GEOSF 50S ribosomal protein L9 OS=Geobacter sp. (strain FRC-32) GN=rplI
PE=3 SV=1
Length = 147
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 30/166 (18%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
+D LG G+ VKVAPGY RN+L+PK LA+ K A + ++ +E +K KV+ +
Sbjct: 9 LDNLGHIGDIVKVAPGYARNYLLPKGLALEATTKNAKALDHAKK---HLEYKKNKVLEQ- 64
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
+R+F A R+E L L + E +L VT EL AE +
Sbjct: 65 ----ARQF---AARIEGIALTLSHQAGEEG-----------KLFGAVTNMEL-AENLKAQ 105
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNVKV 218
+ I+ + + L P+ G++ +++ PE V TL V V
Sbjct: 106 GVEIDRKKIVLAEPIKQVGDFTAIIKIH-----PE--VNATLKVTV 144
>sp|Q1D289|RL9_MYXXD 50S ribosomal protein L9 OS=Myxococcus xanthus (strain DK 1622)
GN=rplI PE=3 SV=1
Length = 147
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
++ LGK+GE V V G+ RN L+P+ AV E+ + +E EK VI
Sbjct: 9 IENLGKSGELVTVKDGFGRNFLLPRKKAVLASEQN----------LRQLEHEKA-VIAAR 57
Query: 113 EDNMSREFEKAARRLENARLVL-RRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQ 171
+ E+ A+++ ++ + RR + +KL + D +AE
Sbjct: 58 NAKLKGAAEEQAKKIGAIKVSIKRRVGDQDKLFGSVTALD-------------IAEAVAA 104
Query: 172 LSISIEPENLHLPSPLSAFGEYEVPMRL 199
SI+ ++HLP P+ A G YEV +RL
Sbjct: 105 EGQSIDRRHIHLPEPIKALGNYEVELRL 132
>sp|Q7UKV4|RL9_RHOBA 50S ribosomal protein L9 OS=Rhodopirellula baltica (strain SH1)
GN=rplI PE=3 SV=1
Length = 177
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 23/147 (15%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V+ LG+ G+ V+V GY N+L+P+ LA + ++ K R + +E EK+K R+
Sbjct: 28 VEHLGRQGDLVEVKAGYALNYLLPQGLATIATDHHKRMVEKHREKLRAIELEKLKSYREQ 87
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
D +++ + + A+ +D L V E+V + +
Sbjct: 88 ADELAK----------------------QSITIEANANDEGHLYGSVGPHEIV-DALKAS 124
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
I++ + + L PL G Y V + L
Sbjct: 125 GITLAQDQIRLEGPLKELGLYTVKIHL 151
>sp|Q3ZZV8|RL9_DEHSC 50S ribosomal protein L9 OS=Dehalococcoides sp. (strain CBDB1)
GN=rplI PE=3 SV=1
Length = 151
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 57 GKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKSEDNM 116
GK G+ +V GY RN+L+P LA+P A K + EE+ K K+E M
Sbjct: 13 GKTGDIKEVNDGYARNYLIPNKLAMP-----ASAAVKSEIAAKQAAEERRKA--KAEAEM 65
Query: 117 SREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQLSISI 176
+ A+ L+ A++ L+ + +KD +L +T + AE+ +Q +I
Sbjct: 66 V----ELAKNLDGAKVNLKAKT--------GAKD---KLYGQITTTVIAAEIEKQTGKTI 110
Query: 177 EPENLHLPSPLSAFGEYEVPMRLPK 201
+ L L P+ G YEV +R K
Sbjct: 111 DKRKLELAEPIRQLGNYEVVIRFNK 135
>sp|A5FRT0|RL9_DEHSB 50S ribosomal protein L9 OS=Dehalococcoides sp. (strain BAV1)
GN=rplI PE=3 SV=1
Length = 151
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 57 GKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKSEDNM 116
GK G+ +V GY RN+L+P LA+P A K + EE+ K K+E M
Sbjct: 13 GKTGDIKEVNDGYARNYLIPNKLAMP-----ASAAVKSEIAAKQAAEERRKA--KAEAEM 65
Query: 117 SREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQLSISI 176
+ A+ L+ A++ L+ + +KD +L +T + AE+ +Q +I
Sbjct: 66 V----ELAKNLDGAKVNLKAKT--------GAKD---KLYGQITTTVIAAEIEKQTGKTI 110
Query: 177 EPENLHLPSPLSAFGEYEVPMRLPK 201
+ L L P+ G YEV +R K
Sbjct: 111 DKRKLELAEPIRQLGNYEVVIRFNK 135
>sp|B0TA56|RL9_HELMI 50S ribosomal protein L9 OS=Heliobacterium modesticaldum (strain
ATCC 51547 / Ice1) GN=rplI PE=3 SV=1
Length = 148
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 24/155 (15%)
Query: 50 QPKVDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVI 109
Q V LGK G+ V +A GY RN+++P+ LA+ P +
Sbjct: 6 QQDVKNLGKKGDIVDIAEGYGRNYVLPRGLAIE---------------ATPAN------L 44
Query: 110 RKSEDNMSREFEKAARRLENARLVLRRFSNIE-KLRSRASKDDPIELRSPVTKEELVAEV 168
+ E + E +K + L +A+ + + S I K+RS+A + L VT +E+ V
Sbjct: 45 KNLERLKANEAKKKEQELMDAKELGAKLSGITVKVRSKAGEGG--RLFGAVTNKEIAETV 102
Query: 169 ARQLSISIEPENLHLPSPLSAFGEYEVPMRLPKAI 203
+Q + ++ L P+ G Y + +++ A+
Sbjct: 103 EKQFGLKVDKRKYELKQPIKTLGHYPITVKIHPAV 137
>sp|B9MQN7|RL9_CALBD 50S ribosomal protein L9 OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=rplI PE=3 SV=1
Length = 148
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 22/151 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V LGK V+V GY RN+L+P+ LAVP E + K + + E++K + ++
Sbjct: 9 VKGLGKKDSVVEVNDGYARNYLIPRKLAVPATEG----LEKHLKEKKEAEQKKKEKELEA 64
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
++ A +LE ++++ ++++A ++ +L +T +E+ E+ +QL
Sbjct: 65 AKDL-------ASKLEKSQII---------IKAKAGENG--KLFGSITNKEIAEEIKKQL 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRLPKAI 203
I + + L P+ G Y+V +RL + +
Sbjct: 107 GFDINKKKIELDDPIKLIGSYDVVIRLYQGV 137
>sp|Q7NHA5|RL9_GLOVI 50S ribosomal protein L9 OS=Gloeobacter violaceus (strain PCC 7421)
GN=rplI PE=3 SV=1
Length = 153
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 26/150 (17%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAV---PNIEKFAHLIRKQRRICQPVEEEKVKVI 109
VD LGKAG V+VAPGY RN+L+P+ LAV P + K A + +RR +
Sbjct: 11 VDTLGKAGTLVEVAPGYARNYLIPQGLAVKATPGLVKEAEFRQAKRREIEAKHRADALET 70
Query: 110 RKSEDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVA 169
+K+ + + F+ + +D +L VT +++ VA
Sbjct: 71 KKTLEALG---------------FYEVFAPV--------GEDGNQLFGTVTNQDVAEVVA 107
Query: 170 RQLSISIEPENLHLPSPLSAFGEYEVPMRL 199
+ I+I+ + + P+ G Y V R+
Sbjct: 108 SKAGITIDRREITIEEPIKRTGVYTVKARI 137
>sp|A8ETF6|RL9_ARCB4 50S ribosomal protein L9 OS=Arcobacter butzleri (strain RM4018)
GN=rplI PE=3 SV=1
Length = 148
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
V LGKAGE +VA GY +N L+ K LA + ++ K + E++K+ + +
Sbjct: 9 VKSLGKAGEIKEVADGYGKNFLIGKGLA---LHATTDVLNKHK-----AEQKKLALKEEQ 60
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
E ++E A +L +L ++ K+ + L VT +E+ + +Q
Sbjct: 61 EIAQAKEL---AEKLNATKLTIKH-----KVGANG------HLIGSVTNKEVSDALEQQF 106
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRLPKAI 203
SI I+ +N+ L + + G YEV +L +I
Sbjct: 107 SIMIDKKNIALDNKIKTIGIYEVDCKLGHSI 137
>sp|P51334|RK9_PORPU 50S ribosomal protein L9, chloroplastic OS=Porphyra purpurea
GN=rpl9 PE=3 SV=1
Length = 155
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 22/147 (14%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
+ KLGK+ + VKVA GY RN L+P +A ++ L Q+++ ++E+K+
Sbjct: 14 IQKLGKSNDVVKVATGYARNFLIPNKMA--SVATVGML--NQQKLYAAIKEKKII----- 64
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
F K ENAR + I+K D + VT++E+ +
Sbjct: 65 -------FAK-----ENARKTQQLLEEIQKFSISKKTGDGETIFGSVTEKEISQIIKNTT 112
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRL 199
++ I+ +N+ +P + G Y + ++L
Sbjct: 113 NVDIDKQNILIP-EIKTIGLYNIEIKL 138
>sp|A5G7R0|RL9_GEOUR 50S ribosomal protein L9 OS=Geobacter uraniireducens (strain Rf4)
GN=rplI PE=3 SV=1
Length = 147
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 34/168 (20%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
++ LG G+ VKVAPGY RN+L+PK A+ K A K+
Sbjct: 9 IENLGHIGDIVKVAPGYARNYLLPKGFALEATTKNA----------------------KA 46
Query: 113 EDNMSREFE-KAARRLENARLVLRRFSNIE-KLRSRASKDDPIELRSPVTKEELVAEVAR 170
D+ + E K + LE AR++ + + L +A ++ +L VT EL AE +
Sbjct: 47 LDHAKKHLEYKKNKVLEQARVLAAKIEGLALNLSHQAGEEG--KLFGAVTNMEL-AEQMK 103
Query: 171 QLSISIEPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNVKV 218
I I+ + + L P+ GE+ +++ PE V TL V V
Sbjct: 104 AQGIEIDRKKIILAEPIKHLGEFTATVKIH-----PE--VNATLKVTV 144
>sp|Q2GEY5|RL9_NEOSM 50S ribosomal protein L9 OS=Neorickettsia sennetsu (strain
Miyayama) GN=rplI PE=3 SV=1
Length = 160
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 55 KLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKSED 114
KLG G+ +KV G+ RN+L+P AV R R +E K K+ +
Sbjct: 11 KLGNVGDVLKVKKGFARNYLIPSGKAV----------RATRANLAILENSKEKLAAQQ-- 58
Query: 115 NMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQLSI 174
A LE A + + F+ I+ L A + + L V+ +++VAE++++ I
Sbjct: 59 ---------AAELETASELAKSFTEIDVLPIYAQAERGV-LFGAVSAKQVVAELSKK-GI 107
Query: 175 SIEPENLHLPSPLSAFGEYEVPMRL 199
I +N+ L +P+ A GE+EV + L
Sbjct: 108 EITTKNVVLGAPIKALGEHEVRIFL 132
>sp|Q67J52|RL9_SYMTH 50S ribosomal protein L9 OS=Symbiobacterium thermophilum (strain T
/ IAM 14863) GN=rplI PE=3 SV=1
Length = 146
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 25/161 (15%)
Query: 50 QPKVDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVI 109
+ V GK G+TV+VA GY RN+L+P+ LAV E I +R+ Q ++ +V +
Sbjct: 4 KADVKGTGKKGQTVEVADGYARNYLIPRGLAVAASEGALRSIEAERKAQQEKQQRQVAEL 63
Query: 110 RKSEDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVA 169
D RL+ + ++ RA + L VT +++ +A
Sbjct: 64 SALRD-----------RLDG-----------QTIQLRAKCGEGGRLFGSVTNKDVADAIA 101
Query: 170 RQLSISIEPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKV 210
R + + + + L +P+ G + V +R I GKV
Sbjct: 102 RHIGKPFDRKMVELDAPIKTLGVHLVTLRFGHNIT---GKV 139
>sp|B3EKG2|RL9_CHLPB 50S ribosomal protein L9 OS=Chlorobium phaeobacteroides (strain
BS1) GN=rplI PE=3 SV=1
Length = 148
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
+ LG AGE V V GY N+L+P+ +A+ E + +R+
Sbjct: 9 ISTLGDAGEVVDVKNGYANNYLIPQGIALRATEGTLKALETERK---------------- 52
Query: 113 EDNMSREFEKAARRLENARLVLRRFSN-IEKLRSR--ASKDDPIELRSPVTKEELVAEVA 169
+ AR++E R+ R ++ +++L + A + +L VT + +AE
Sbjct: 53 ---------QQARKIEQQRIAAREVADKVQQLNLKVLAKAGESGKLFGTVTSGD-IAEAL 102
Query: 170 RQLSISIEPENLHLPSPLSAFGEYEVPMRL 199
+S++ + L SP+ G YEV ++L
Sbjct: 103 SNEGVSVDRRKISLESPIKTLGAYEVGVKL 132
>sp|Q2IM65|RL9_ANADE 50S ribosomal protein L9 OS=Anaeromyxobacter dehalogenans (strain
2CP-C) GN=rplI PE=3 SV=1
Length = 149
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 36/167 (21%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVP----NIEKFAHLIRKQRRICQPVEEEKVKV 108
V+ LGK G+ V V PGY RN+L+P+ LAV N+++ H ++ V
Sbjct: 9 VENLGKGGDLVDVKPGYGRNYLLPRGLAVSANPKNVKELEHQKAVAAAKAAKLKASAQAV 68
Query: 109 IRKSEDNMSREFEKAARRLENARLVL-RRFSNIEKLRSRASKDDPIELRSPVTKEELVAE 167
A+RL + L R+ +KL + D VAE
Sbjct: 69 ---------------AKRLSETPVTLKRKVGEQDKLYGSVTALD-------------VAE 100
Query: 168 VARQLSISIEPENLHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTL 214
+ ++ ++ L P+ GE+EVP++L + GKV+ T+
Sbjct: 101 ALAARGVQLDRRSIVLDEPIKTLGEFEVPVKLHSEVA---GKVKVTV 144
>sp|C6BVB0|RL9_DESAD 50S ribosomal protein L9 OS=Desulfovibrio salexigens (strain ATCC
14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rplI PE=3
SV=1
Length = 177
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 47 LTNQPKVDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKV 106
L + VD LG G+ V V GY RN+L+P+ LA+P E A+L + E EK
Sbjct: 3 LILRADVDALGSLGDIVTVKAGYGRNYLIPQGLAMPASE--ANL--------KQFELEKR 52
Query: 107 KVIRKSEDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVA 166
K +++ DN+ + E +L + K+ R + D +L VT +A
Sbjct: 53 K-LQEMADNLRTQAEGLRDKLAEVEV---------KIEVRVGEGD--KLYGSVTAVN-IA 99
Query: 167 EVARQLSISIEPENLHLPSPLSAFGEYEVPMRL 199
+ ++ I+ + L P+ + GEY++ ++L
Sbjct: 100 DALAEMDFDIDRRKILLSDPIRSLGEYDIEIKL 132
>sp|C1F902|RL9_ACIC5 50S ribosomal protein L9 OS=Acidobacterium capsulatum (strain ATCC
51196 / DSM 11244 / JCM 7670) GN=rplI PE=3 SV=1
Length = 151
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 23/152 (15%)
Query: 53 VDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIRKQRRICQPVEEEKVKVIRKS 112
++ LG G+ VKVA GY RN+L+PK LA+ +I E+ K +R+S
Sbjct: 9 IETLGHRGDIVKVADGYGRNYLLPKKLAMEATAANKAVI----------EQMKASAVRRS 58
Query: 113 EDNMSREFEKAARRLENARLVLRRFSNIEKLRSRASKDDPIELRSPVTKEELVAEVARQL 172
+ E E+ +L+ LV R D L VT ++ ++ +Q
Sbjct: 59 AKEKA-EAEQLVAQLDAVALVFERKVG-----------DHDHLFGSVTSSDIAQQLEQQ- 105
Query: 173 SISIEPENLHLPSPLSAFGEYEVPMRLPKAIP 204
I+ + L PL GE+ +P++L + +
Sbjct: 106 GFHIDRRKVQLEEPLKQTGEFLIPVKLHREVT 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,616,984
Number of Sequences: 539616
Number of extensions: 3300098
Number of successful extensions: 11107
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 218
Number of HSP's that attempted gapping in prelim test: 10455
Number of HSP's gapped (non-prelim): 764
length of query: 221
length of database: 191,569,459
effective HSP length: 113
effective length of query: 108
effective length of database: 130,592,851
effective search space: 14104027908
effective search space used: 14104027908
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)