BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038181
(620 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 140/294 (47%), Gaps = 49/294 (16%)
Query: 366 RRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTR 425
+RF + EL A+ FS +L G +Y+G L +G VAVKR E L +
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKE-ERXQGGELQFQT 84
Query: 426 VLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLF----GVGVLPWS 481
++ IS + H NL +RG+C E ++VY Y NGS+ L L W
Sbjct: 85 EVEMIS-----MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 139
Query: 482 RRFELIKDVAESLSFLHSK---ELTHGNLKSSSVFLDVNCKAVLGDYGF----------- 527
+R + A L++LH ++ H ++K++++ LD +AV+GD+G
Sbjct: 140 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV 199
Query: 528 ---FMGSV------------SSKKADVFGFGMLVLEIVSGKR----TELEEEITDVLGFA 568
G++ SS+K DVFG+G+++LE+++G+R L + DV+
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND-DDVMLLD 258
Query: 569 W--AMHEKGEMVNVIDERMKSNMNLEQAIRVLEIGLVCTLCEGNIGIGRPSMEE 620
W + ++ ++ ++D ++ N E+ +++++ L+CT + RP M E
Sbjct: 259 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS---PMERPKMSE 309
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 138/294 (46%), Gaps = 49/294 (16%)
Query: 366 RRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTR 425
+RF + EL A+ F +L G +Y+G L +G VAVKR E L +
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKE-ERTQGGELQFQT 76
Query: 426 VLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLF----GVGVLPWS 481
++ IS + H NL +RG+C E ++VY Y NGS+ L L W
Sbjct: 77 EVEMIS-----MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 131
Query: 482 RRFELIKDVAESLSFLHSK---ELTHGNLKSSSVFLDVNCKAVLGDYG------------ 526
+R + A L++LH ++ H ++K++++ LD +AV+GD+G
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV 191
Query: 527 --------------FFMGSVSSKKADVFGFGMLVLEIVSGKR----TELEEEITDVLGFA 568
+ SS+K DVFG+G+++LE+++G+R L + DV+
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND-DDVMLLD 250
Query: 569 W--AMHEKGEMVNVIDERMKSNMNLEQAIRVLEIGLVCTLCEGNIGIGRPSMEE 620
W + ++ ++ ++D ++ N E+ +++++ L+CT + + RP M E
Sbjct: 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCT---QSSPMERPKMSE 301
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 125/291 (42%), Gaps = 44/291 (15%)
Query: 362 PSKPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
P + R +++L AT F ++ G +Y+G L +G VA+KR +
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES------- 75
Query: 422 DWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV---- 477
T + HP+L + G+C + E I++Y Y +NG+L R L+G +
Sbjct: 76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS 135
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYG----------- 526
+ W +R E+ A L +LH++ + H ++KS ++ LD N + D+G
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT 195
Query: 527 ----------------FFMGSVSSKKADVFGFGMLVLEIVSGKRT---ELEEEITDVLGF 567
+F+ ++K+DV+ FG+++ E++ + L E+ ++ +
Sbjct: 196 HLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
Query: 568 AWAMHEKGEMVNVIDERMKSNMNLEQAIRVLEIGLVCTLCEGNIGIGRPSM 618
A H G++ ++D + + E + + + C RPSM
Sbjct: 256 AVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSE---DRPSM 303
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 125/291 (42%), Gaps = 44/291 (15%)
Query: 362 PSKPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
P + R +++L AT F ++ G +Y+G L +G VA+KR +
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES------- 75
Query: 422 DWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV---- 477
T + HP+L + G+C + E I++Y Y +NG+L R L+G +
Sbjct: 76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS 135
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYG----------- 526
+ W +R E+ A L +LH++ + H ++KS ++ LD N + D+G
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQT 195
Query: 527 ----------------FFMGSVSSKKADVFGFGMLVLEIVSGKRT---ELEEEITDVLGF 567
+F+ ++K+DV+ FG+++ E++ + L E+ ++ +
Sbjct: 196 HLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
Query: 568 AWAMHEKGEMVNVIDERMKSNMNLEQAIRVLEIGLVCTLCEGNIGIGRPSM 618
A H G++ ++D + + E + + + C RPSM
Sbjct: 256 AVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSE---DRPSM 303
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
pdb|1HQL|B Chain B, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
Length = 257
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 104/244 (42%), Gaps = 18/244 (7%)
Query: 48 FSNFTSNYEIKLLGNASISQDKGFIQIPDPSP-AVDHAYQAGRAIYSSPIRLLDPLTATP 106
F NF S+ E ++ + G +Q+ + + AGRA+YS P++L D T +
Sbjct: 9 FPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESV 68
Query: 107 AXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDAC----EHYKV 162
A LAF + P + V AG +LG+ N + +V
Sbjct: 69 ASFYTEFTFFLKITGNGPADG----LAFFLAPPDSDVKDAGEYLGLFNKSTATQPSKNQV 124
Query: 163 FAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGHR 222
AVEFD +PNF +P+ H+GIN+ + VS T +S+ + A I YDG
Sbjct: 125 VAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWEDSDI---FSGKIATARISYDGSA 181
Query: 223 NWIEIYLGV-DGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHS-ILSWEFFS 280
+ + L DG S E + VG SASTG++ + ILSW F S
Sbjct: 182 EILTVVLSYPDG----SDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFSS 237
Query: 281 TSQA 284
Q+
Sbjct: 238 NLQS 241
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal
Free Form
Length = 257
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 104/244 (42%), Gaps = 18/244 (7%)
Query: 48 FSNFTSNYEIKLLGNASISQDKGFIQIPDPSP-AVDHAYQAGRAIYSSPIRLLDPLTATP 106
F NF S+ E ++ + G +Q+ + + AGRA+YS P++L D T +
Sbjct: 9 FPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESV 68
Query: 107 AXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDAC----EHYKV 162
A LAF + P + V AG +LG+ N + +V
Sbjct: 69 ASFYTEFTFFLKITGNGPADG----LAFFLAPPDSDVKDAGEYLGLFNKSTATQPSKNQV 124
Query: 163 FAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGHR 222
AVEFD +PNF +P+ H+GIN+ + VS T +S+ + A I YDG
Sbjct: 125 VAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKRWEDSDI---FSGKIATARISYDGSA 181
Query: 223 NWIEIYLGV-DGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHS-ILSWEFFS 280
+ + L DG S E + VG SASTG++ + ILSW F S
Sbjct: 182 EILTVVLSYPDG----SDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFSS 237
Query: 281 TSQA 284
Q+
Sbjct: 238 NLQS 241
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 41/235 (17%)
Query: 354 DGKQRPVPPSKPRRFEILELYRATKRFSKMEVLASDTR------GVLYRGTLPNGCYVAV 407
+ K V ++ F EL T F + + + GV+Y+G + N VAV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 408 KRFSSNEFLHLSRLDWTRVLKRISSITTNVPC-HPNLAPIRGWCCDNRETIIVYDYYQNG 466
K+ ++ + ++ + + + I C H NL + G+ D + +VY Y NG
Sbjct: 60 KKLAA--MVDITTEELKQQFDQ--EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115
Query: 467 SL-DRW--LFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLG 523
SL DR L G L W R ++ + A ++FLH H ++KS+++ LD A +
Sbjct: 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKIS 175
Query: 524 DYGF---------------FMGSVS-----------SKKADVFGFGMLVLEIVSG 552
D+G +G+ + + K+D++ FG+++LEI++G
Sbjct: 176 DFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 41/235 (17%)
Query: 354 DGKQRPVPPSKPRRFEILELYRATKRFSKMEVLASDTR------GVLYRGTLPNGCYVAV 407
+ K V ++ F EL T F + + + GV+Y+G + N VAV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 408 KRFSSNEFLHLSRLDWTRVLKRISSITTNVPC-HPNLAPIRGWCCDNRETIIVYDYYQNG 466
K+ ++ + ++ + + + I C H NL + G+ D + +VY Y NG
Sbjct: 60 KKLAA--MVDITTEELKQQFDQ--EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115
Query: 467 SL-DRW--LFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLG 523
SL DR L G L W R ++ + A ++FLH H ++KS+++ LD A +
Sbjct: 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKIS 175
Query: 524 DYGF---------------FMGSVS-----------SKKADVFGFGMLVLEIVSG 552
D+G +G+ + + K+D++ FG+++LEI++G
Sbjct: 176 DFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 41/221 (18%)
Query: 368 FEILELYRATKRFSKMEVLASDTR------GVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
F EL T F + + + GV+Y+G + N VAVK+ ++ + ++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAA--MVDITTE 62
Query: 422 DWTRVLKRISSITTNVPC-HPNLAPIRGWCCDNRETIIVYDYYQNGSL-DRW--LFGVGV 477
+ + + I C H NL + G+ D + +VY Y NGSL DR L G
Sbjct: 63 ELKQQFDQ--EIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVS---- 533
L W R ++ + A ++FLH H ++KS+++ LD A + D+G S
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 534 ----------------------SKKADVFGFGMLVLEIVSG 552
+ K+D++ FG+++LEI++G
Sbjct: 181 VXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 41/229 (17%)
Query: 360 VPPSKPRRFEILELYRATKRFSKMEVLASDTR------GVLYRGTLPNGCYVAVKRFSSN 413
V ++ F EL T F + + + GV+Y+G + N VAVK+ ++
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA- 58
Query: 414 EFLHLSRLDWTRVLKRISSITTNVPC-HPNLAPIRGWCCDNRETIIVYDYYQNGSL-DRW 471
+ ++ + + + I C H NL + G+ D + +VY Y NGSL DR
Sbjct: 59 -MVDITTEELKQQFDQ--EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 115
Query: 472 --LFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-- 527
L G L W R ++ + A ++FLH H ++KS+++ LD A + D+G
Sbjct: 116 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR 175
Query: 528 -------------FMGSVS-----------SKKADVFGFGMLVLEIVSG 552
+G+ + + K+D++ FG+++LEI++G
Sbjct: 176 ASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|C Chain C, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|E Chain E, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|G Chain G, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 256
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 97/258 (37%), Gaps = 39/258 (15%)
Query: 40 TNVTKHLFFSNFTSNY-EIKLLGNASISQDKGFIQ--------IPDPSPAVDHAYQAGRA 90
T T FS F N +K G+A+++ G +Q +PDP GRA
Sbjct: 1 TTNTDSFTFSKFKPNQPNLKKQGDATVTS-SGTLQLTKVDKNGVPDPK-------SLGRA 52
Query: 91 IYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWL 150
+Y+SPI + D T A LAF + P +L
Sbjct: 53 LYASPINIWDSKTGVVASFATSFRFTIYAPNIATIADG---LAFFLAPVSSPPKAGAGFL 109
Query: 151 GIVNDAC--EHYKVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHD 208
G+ + A Y+ AVEFD + F DP D H+GI++ + S KT +N
Sbjct: 110 GLFDSAVFNSSYQTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSIKTVKWDLANGE---- 165
Query: 209 DVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXX---XXXXXXXXXXXEYMFVGFSASTG 265
+ I YD + L PS E++ +GFSA+TG
Sbjct: 166 --AAKVLITYDSSAKLLVAAL-----VYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATG 218
Query: 266 DSS---QIHSILSWEFFS 280
SS + H + SW F S
Sbjct: 219 ASSGYIETHDVFSWSFAS 236
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|D Chain D, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|F Chain F, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|H Chain H, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 242
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 97/258 (37%), Gaps = 39/258 (15%)
Query: 40 TNVTKHLFFSNFTSNY-EIKLLGNASISQDKGFIQ--------IPDPSPAVDHAYQAGRA 90
T T FS F N +K G+A+++ G +Q +PDP GRA
Sbjct: 1 TTNTDSFTFSKFKPNQPNLKKQGDATVTS-SGTLQLTKVDKNGVPDPK-------SLGRA 52
Query: 91 IYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWL 150
+Y+SPI + D T A LAF + P +L
Sbjct: 53 LYASPINIWDSKTGVVASFATSFRFTIYAPNIATIADG---LAFFLAPVSSPPKAGAGFL 109
Query: 151 GIVNDAC--EHYKVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHD 208
G+ + A Y+ AVEFD + F DP D H+GI++ + S KT +N
Sbjct: 110 GLFDSAVFNSSYQTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSIKTVKWDLANGE---- 165
Query: 209 DVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXX---XXXXXXXXXXXEYMFVGFSASTG 265
+ I YD + L PS E++ +GFSA+TG
Sbjct: 166 --AAKVLITYDSSAKLLVAAL-----VYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATG 218
Query: 266 DSS---QIHSILSWEFFS 280
SS + H + SW F S
Sbjct: 219 ASSGYIETHDVFSWSFAS 236
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form
pdb|1WBF|B Chain B, Winged Bean Lectin, Saccharide Free Form
pdb|2D3S|A Chain A, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|B Chain B, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|C Chain C, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|D Chain D, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
Length = 242
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 99/249 (39%), Gaps = 23/249 (9%)
Query: 48 FSNFTSNYE-IKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATP 106
F+ F N E +KL +A IS + +++ V GRA+Y+ P+++ D T
Sbjct: 8 FNQFHQNEEQLKLQRDARISSNS-VLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNV 66
Query: 107 AXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDACEHYKVFAVE 166
A L F I P G G + GI N Y AVE
Sbjct: 67 ASFETRFSFSIRQPFPRPHPADG--LVFFIAPPNTQTGEGGGYFGIYN-PLSPYPFVAVE 123
Query: 167 FDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGHRNWIE 226
FD N DP H+GI++ + +S KT + N + +VV I+YD +
Sbjct: 124 FDTFR--NTWDPQIPHIGIDVNSVISTKTVPFTLDNGGIA--NVV----IKYDASTKILH 175
Query: 227 IYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSS-------QIHSILSWEFF 279
+ L ++ + E + VGFSA+TGD S + H ILSW F
Sbjct: 176 VVLVF--PSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWS-F 232
Query: 280 STSQAMLNE 288
S S NE
Sbjct: 233 SASLPGTNE 241
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|B Chain B, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|C Chain C, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|D Chain D, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|2DTW|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTY|A Chain A, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|B Chain B, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|C Chain C, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|D Chain D, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DU0|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU1|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2E51|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E53|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2ZMK|A Chain A, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|B Chain B, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|C Chain C, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|D Chain D, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZML|A Chain A, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|B Chain B, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|C Chain C, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|D Chain D, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZMN|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
Length = 241
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 99/249 (39%), Gaps = 23/249 (9%)
Query: 48 FSNFTSNYE-IKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATP 106
F+ F N E +KL +A IS + +++ V GRA+Y+ P+++ D T
Sbjct: 7 FNQFHQNEEQLKLQRDARISSNS-VLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNV 65
Query: 107 AXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDACEHYKVFAVE 166
A L F I P G G + GI N Y AVE
Sbjct: 66 ASFETRFSFSIRQPFPRPHPADG--LVFFIAPPNTQTGEGGGYFGIYN-PLSPYPFVAVE 122
Query: 167 FDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGHRNWIE 226
FD N DP H+GI++ + +S KT + N + +VV I+YD +
Sbjct: 123 FDTFR--NTWDPQIPHIGIDVNSVISTKTVPFTLDNGGIA--NVV----IKYDASTKILH 174
Query: 227 IYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSS-------QIHSILSWEFF 279
+ L ++ + E + VGFSA+TGD S + H ILSW F
Sbjct: 175 VVLVF--PSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWS-F 231
Query: 280 STSQAMLNE 288
S S NE
Sbjct: 232 SASLPGTNE 240
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7T|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
Length = 237
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 95/239 (39%), Gaps = 22/239 (9%)
Query: 48 FSNFTSNYE-IKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATP 106
F+ F N E +KL +A IS + +++ V GRA+Y+ P+++ D T
Sbjct: 7 FNQFHQNEEQLKLQRDARISSNS-VLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNV 65
Query: 107 AXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDACEHYKVFAVE 166
A L F I P G G + GI N Y AVE
Sbjct: 66 ASFETRFSFSIRQPFPRPHPADG--LVFFIAPPNTQTGEGGGYFGIYN-PLSPYPFVAVE 122
Query: 167 FDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGHRNWIE 226
FD N DP H+GI++ + +S KT + N + +VV I+YD +
Sbjct: 123 FDTFR--NTWDPQIPHIGIDVNSVISTKTVPFTLDNGGIA--NVV----IKYDASTKILH 174
Query: 227 IYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSS-------QIHSILSWEF 278
+ L ++ + E + VGFSA+TGD S + H ILSW F
Sbjct: 175 VVLVF--PSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWSF 231
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 39/209 (18%)
Query: 371 LELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRI 430
+EL R + + ++ L S GV+ G VAVK + + ++
Sbjct: 3 MELKR--EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL 60
Query: 431 SSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL--FGVGVLPWSRRFELIK 488
S HP L G C IV +Y NG L +L G G+ P S+ E+
Sbjct: 61 S--------HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP-SQLLEMCY 111
Query: 489 DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK----- 535
DV E ++FL S + H +L + + +D + + D+G ++ SV +K
Sbjct: 112 DVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKW 171
Query: 536 -------------KADVFGFGMLVLEIVS 551
K+DV+ FG+L+ E+ S
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide
pdb|1G9F|A Chain A, Crystal Structure Of The Soybean Agglutinin In A Complex
With A Biantennary Blood Group Antigen Analog
pdb|1SBD|A Chain A, Soybean Agglutinin Complexed With 2,4-pentasaccharide
pdb|1SBE|A Chain A, Soybean Agglutinin From Glycine Max
pdb|1SBF|A Chain A, Soybean Agglutinin
Length = 253
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 21/198 (10%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA+YS+PI + D T + A LAF + P +
Sbjct: 49 GRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADG---LAFFLAPIDTKPQTHA 105
Query: 148 PWLGIVNDACEHYKVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHH 207
+LG+ N+ +V AVEFD N DP + H+GIN+ + S KT +N
Sbjct: 106 GYLGLFNENESGDQVVAVEFDTFR--NSWDPPNPHIGINVNSIRSIKTTSWDLAN----- 158
Query: 208 DDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXX---XXXXXXXXXXXEYMFVGFSAST 264
+ V + I YD + + L PSQ E++ +GFSA+T
Sbjct: 159 -NKVAKVLITYDASTSLLVASL-----VYPSQRTSNILSDVVDLKTSLPEWVRIGFSAAT 212
Query: 265 G--DSSQIHSILSWEFFS 280
G + H +LSW F S
Sbjct: 213 GLDIPGESHDVLSWSFAS 230
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 44/202 (21%)
Query: 384 EVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSR----LDWTRVLKRISSITTNVPC 439
E + + + G ++R +G VAVK +F H R L ++KR+
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLR-------- 92
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV---LPWSRRFELIKDVAESLSF 496
HPN+ G IV +Y GSL R L G L RR + DVA+ +++
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 497 LHSKE--LTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSS------------- 534
LH++ + H NLKS ++ +D + D+G F+ S S+
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLR 212
Query: 535 -----KKADVFGFGMLVLEIVS 551
+K+DV+ FG+++ E+ +
Sbjct: 213 DEPSNEKSDVYSFGVILWELAT 234
>pdb|1FAT|A Chain A, Phytohemagglutinin-L
pdb|1FAT|B Chain B, Phytohemagglutinin-L
pdb|1FAT|C Chain C, Phytohemagglutinin-L
pdb|1FAT|D Chain D, Phytohemagglutinin-L
Length = 252
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA YS+PI++ D T T A LAF +VP G
Sbjct: 47 GRAFYSAPIQIWDNTTGTVA---SFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKG 103
Query: 148 PWLGIVNDACEHYKVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHH 207
+LG+ + + ++ AVEFD + ++ DP + H+GI++ + S KT N +
Sbjct: 104 GFLGLFDGSNSNFHTVAVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTRWDFVNG--EN 160
Query: 208 DDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EYMFVGFSAST 264
+V+ I YD N + L PSQ E++ VGFSA+T
Sbjct: 161 AEVL----ITYDSSTNLLVASL-----VYPSQKTSFIVSDTVDLKSVLPEWVSVGFSATT 211
Query: 265 G---DSSQIHSILSWEFFS 280
G + + + +LSW F S
Sbjct: 212 GINKGNVETNDVLSWSFAS 230
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|C Chain C, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|D Chain D, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|E Chain E, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|F Chain F, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|G Chain G, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|H Chain H, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1F9K|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
pdb|1F9K|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
Length = 238
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 75/200 (37%), Gaps = 14/200 (7%)
Query: 87 AGRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRA 146
GRA+Y+ PI++ D T A L F +VP G
Sbjct: 47 TGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADG--LTFFMVPPNSPQGED 104
Query: 147 GPWLGIVNDACEHYKVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLH 206
G LG+ E FAVEFD N DP H+GI++ + VS KT N
Sbjct: 105 GGNLGVF-KPPEGDNAFAVEFDTFQ--NTWDPQVPHIGIDVNSIVSSKTLHFQLENGG-- 159
Query: 207 HDDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTG- 265
V I+YD + + L E++ VG SA+TG
Sbjct: 160 ----VANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGY 215
Query: 266 --DSSQIHSILSWEFFSTSQ 283
++ + H I+SW F S+ Q
Sbjct: 216 QKNAVETHEIISWSFTSSLQ 235
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|B Chain B, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|C Chain C, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|D Chain D, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
Length = 233
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA YS+PI++ D T T A LAF +VP G
Sbjct: 47 GRAFYSAPIQIWDNTTGTVA---SFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKG 103
Query: 148 PWLGIVNDACEHYKVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHH 207
+LG+ + + ++ AVEFD + ++ DP + H+GI++ + S KT N +
Sbjct: 104 GFLGLFDGSNSNFHTVAVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTRWDFVNG--EN 160
Query: 208 DDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EYMFVGFSAST 264
+V+ I YD N + L PSQ E++ VGFSA+T
Sbjct: 161 AEVL----ITYDSSTNLLVASL-----VYPSQKTSFIVSDTVDLKSVLPEWVSVGFSATT 211
Query: 265 G---DSSQIHSILSWEFFS 280
G + + + +LSW F S
Sbjct: 212 GINKGNVETNDVLSWSFAS 230
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 38/180 (21%)
Query: 401 NGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVY 460
NG Y A+K + L +++ T + + SI T HP + + G D ++ ++
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT----HPFIIRMWGTFQDAQQIFMIM 85
Query: 461 DYYQNGSLDRWLFGVGVLPWSRRFE------LIKDVAESLSFLHSKELTHGNLKSSSVFL 514
DY + G L +L S+RF +V +L +LHSK++ + +LK ++ L
Sbjct: 86 DYIEGGEL------FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL 139
Query: 515 DVNCKAVLGDYGF--FMGSVS--------------------SKKADVFGFGMLVLEIVSG 552
D N + D+GF ++ V+ +K D + FG+L+ E+++G
Sbjct: 140 DKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 55 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ D+ G L
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYL 173
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 174 PPEMIEGR 181
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 60 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ D+ G L
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYL 178
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 179 PPEMIEGR 186
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 56 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ D+ G L
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYL 174
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 175 PPEMIEGR 182
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 55 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ D+ G L
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYL 173
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 174 PPEMIEGR 181
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 59 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L N + + D+G+ + + SS++ + G L
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYL 177
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 178 PPEMIEGR 185
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 81 LRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 139
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ D+ G L
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYL 199
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 200 PPEMIEGR 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D+ ++ +Y G++ R L + R
Sbjct: 55 LRREVEIQSHL-RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK++ H ++K ++ L + + D+G+ + + SS++A + G L
Sbjct: 114 ITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYL 173
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 174 PPEMIEGR 181
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
pdb|1DBN|B Chain B, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
Length = 239
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 102/251 (40%), Gaps = 41/251 (16%)
Query: 50 NFTSNYEIKLL--GNASISQDKGFIQIPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATPA 107
NF N E LL G AS+S G +Q+ Y GRA+Y++P+R+ T + A
Sbjct: 10 NFVPN-EADLLFQGEASVSS-TGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTGSVA 67
Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTV--GRAGPWLGI--VNDACEHYKVF 163
LAF + P + + G +LG+ +++ ++
Sbjct: 68 ---SFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDSSNQIV 124
Query: 164 AVEFDN----SNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHR------ 213
AVEFD S DP DPN H+GI++ S KT N + + +
Sbjct: 125 AVEFDTYFAHSYDP--WDPNYRHIGIDVNGIESIKTVQWDWINGGVAFATITYLAPNKTL 182
Query: 214 -AWIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQI-- 270
A + Y ++ + VD + E++ VGFSA+TG +++
Sbjct: 183 IASLVYPSNQTTFSVAASVDLKEI---------------LPEWVRVGFSAATGYPTEVET 227
Query: 271 HSILSWEFFST 281
H +LSW F ST
Sbjct: 228 HDVLSWSFTST 238
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 58 LRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ D+ G L
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYL 176
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 177 PPEMIEGR 184
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|D Chain D, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 239
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 80/215 (37%), Gaps = 29/215 (13%)
Query: 74 IPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLA 133
+P+PS GRA YS+PI + D T A LA
Sbjct: 42 VPEPS-------SLGRATYSAPINIWDSATGLVASFATSFRFTIYAPNIATIADG---LA 91
Query: 134 FVIVPDEFTVGRAGPWLGIVNDAC--EHYKVFAVEFDNSNDPNFGDPNDDHVGINLGTAV 191
F + P G +LG+ + A Y+ AVEFD + F DP H+G ++ +
Sbjct: 92 FFLAPVASAPDSGGGFLGLFDSAVGDTTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSIS 151
Query: 192 SFKTADSSESNASLHHDDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXX---XXXXXX 248
S KT S +N + I Y+ + L V PS
Sbjct: 152 SIKTVKWSLANGE------AAKVLITYNS-----AVKLLVASLVYPSSKTSFILADIVDL 200
Query: 249 XXXXXEYMFVGFSASTGDSS---QIHSILSWEFFS 280
E++ VGFSA+TG S + H + SW F S
Sbjct: 201 SSVLPEWVRVGFSAATGASKGYIETHDVFSWSFAS 235
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|C Chain C, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 251
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 80/215 (37%), Gaps = 29/215 (13%)
Query: 74 IPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLA 133
+P+PS GRA YS+PI + D T A LA
Sbjct: 42 VPEPS-------SLGRATYSAPINIWDSATGLVASFATSFRFTIYAPNIATIADG---LA 91
Query: 134 FVIVPDEFTVGRAGPWLGIVNDACE--HYKVFAVEFDNSNDPNFGDPNDDHVGINLGTAV 191
F + P G +LG+ + A Y+ AVEFD + F DP H+G ++ +
Sbjct: 92 FFLAPVASAPDSGGGFLGLFDSAVSGSTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSIS 151
Query: 192 SFKTADSSESNASLHHDDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXX---XXXXXX 248
S KT S +N + I Y+ + L V PS
Sbjct: 152 SIKTVKWSLANGE------AAKVLITYNS-----AVKLLVASLVYPSSKTSFILADIVDL 200
Query: 249 XXXXXEYMFVGFSASTGDSS---QIHSILSWEFFS 280
E++ VGFSA+TG S + H + SW F S
Sbjct: 201 SSVLPEWVRVGFSAATGASGGKIETHDVFSWSFAS 235
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 59 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L N + + D+G+ + + SS++ + G L
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYL 177
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 178 PPEMIEGR 185
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 55 LRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++A + G L
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYL 173
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 174 PPEMIEGR 181
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 58 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++A + G L
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYL 176
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 177 PPEMIEGR 184
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 55 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ ++ G L
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYL 173
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 174 PPEMIEGR 181
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 44/202 (21%)
Query: 384 EVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSR----LDWTRVLKRISSITTNVPC 439
E + + + G ++R +G VAVK +F H R L ++KR+
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLR-------- 92
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV---LPWSRRFELIKDVAESLSF 496
HPN+ G IV +Y GSL R L G L RR + DVA+ +++
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 497 LHSKE--LTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSV--------------- 532
LH++ + H +LKS ++ +D + D+G F+ S
Sbjct: 153 LHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 533 ---SSKKADVFGFGMLVLEIVS 551
S++K+DV+ FG+++ E+ +
Sbjct: 213 DEPSNEKSDVYSFGVILWELAT 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 441 PNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSK 500
P + P+ G + I + + GSL + + +G LP R + E L +LH++
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 185
Query: 501 ELTHGNLKSSSVFLDVN-CKAVLGDYGFFMGSVSSKKADVFGFGMLVLEIVSGKRTELEE 559
+ HG++K+ +V L + +A L D+G + + D G +L + + G T +
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHAL----CLQPDGLGKSLLTGDYIPGTETHMAP 241
Query: 560 EIT 562
E+
Sbjct: 242 EVV 244
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia
Milbraedii Seed Agglutinin
Length = 240
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 96/239 (40%), Gaps = 18/239 (7%)
Query: 48 FSNFTSNYE-IKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATP 106
F++F S + + G+AS+ +K S GRA+Y++PIRL +
Sbjct: 8 FTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQ----SS 63
Query: 107 AXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPD-EFTVGRAGPWLGIV---NDACEHYKV 162
+ F+ PD + G G LG+ N+A V
Sbjct: 64 SLVASFETTFTFSISQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSDNGV 123
Query: 163 FAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGHR 222
+VEFD + + GDPN H+GI++ S ++ +S+ + H I Y+
Sbjct: 124 VSVEFDTYPNTDIGDPNYRHIGIDVN---SIRSKAASKWDWQNGKTATAH---ISYNSAS 177
Query: 223 NWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFST 281
+ + V S ++ VGFSA+TG +Q ++IL+W F S+
Sbjct: 178 KRLSV---VSSYPNSSPVVVSFDVELNNVXPXWVRVGFSATTGQYTQTNNILAWSFRSS 233
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 441 PNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSK 500
P + P+ G + I + + GSL + + +G LP R + E L +LH++
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169
Query: 501 ELTHGNLKSSSVFLDVN-CKAVLGDYGFFMGSVSSKKADVFGFGMLVLEIVSGKRTELEE 559
+ HG++K+ +V L + +A L D+G + + D G +L + + G T +
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHAL----CLQPDGLGKSLLTGDYIPGTETHMAP 225
Query: 560 EIT 562
E+
Sbjct: 226 EVV 228
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 441 PNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSK 500
P + P+ G + I + + GSL + + +G LP R + E L +LH++
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 183
Query: 501 ELTHGNLKSSSVFLDVN-CKAVLGDYGFFMGSVSSKKADVFGFGMLVLEIVSGKRTELEE 559
+ HG++K+ +V L + +A L D+G + + D G +L + + G T +
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHAL----CLQPDGLGKSLLTGDYIPGTETHMAP 239
Query: 560 EIT 562
E+
Sbjct: 240 EVV 242
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 54/245 (22%)
Query: 405 VAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ 464
VA+K+ S R + L+++S + HPN+ + G C + +V +Y +
Sbjct: 35 VAIKQIESES----ERKAFIVELRQLSRVN-----HPNIVKLYGACLN--PVCLVMEYAE 83
Query: 465 NGSLDRWLFGVGVLPW---SRRFELIKDVAESLSFLHS---KELTHGNLKSSSVFLDVNC 518
GSL L G LP+ + ++ +++LHS K L H +LK ++ L
Sbjct: 84 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 143
Query: 519 KAV-LGDYG----------------------FFMGSVSSKKADVFGFGMLVLEIVSGKRT 555
+ + D+G F GS S+K DVF +G+++ E+++ +R
Sbjct: 144 TVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRK 202
Query: 556 ELEEEITDVLGFAWAMHEKGEMVNVIDERMKSNMNLEQAIRVLEIGLVCTLCEGNIGIGR 615
+E WA+H G +I NL + I L T C R
Sbjct: 203 PFDEIGGPAFRIMWAVH-NGTRPPLIK-------NLPKPIESL-----MTRCWSKDPSQR 249
Query: 616 PSMEE 620
PSMEE
Sbjct: 250 PSMEE 254
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 54/245 (22%)
Query: 405 VAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ 464
VA+K+ S R + L+++S + HPN+ + G C + +V +Y +
Sbjct: 34 VAIKQIESES----ERKAFIVELRQLSRVN-----HPNIVKLYGACLN--PVCLVMEYAE 82
Query: 465 NGSLDRWLFGVGVLPW---SRRFELIKDVAESLSFLHS---KELTHGNLKSSSVFLDVNC 518
GSL L G LP+ + ++ +++LHS K L H +LK ++ L
Sbjct: 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 142
Query: 519 KAV-LGDYG----------------------FFMGSVSSKKADVFGFGMLVLEIVSGKRT 555
+ + D+G F GS S+K DVF +G+++ E+++ +R
Sbjct: 143 TVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRK 201
Query: 556 ELEEEITDVLGFAWAMHEKGEMVNVIDERMKSNMNLEQAIRVLEIGLVCTLCEGNIGIGR 615
+E WA+H G +I NL + I L T C R
Sbjct: 202 PFDEIGGPAFRIMWAVH-NGTRPPLIK-------NLPKPIESL-----MTRCWSKDPSQR 248
Query: 616 PSMEE 620
PSMEE
Sbjct: 249 PSMEE 253
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 81 LRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 139
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 199
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 200 PPEMIEGR 207
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|B Chain B, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|C Chain C, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|D Chain D, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJQ|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UK9|A Chain A, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|B Chain B, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|C Chain C, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|D Chain D, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|E Chain E, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|F Chain F, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|G Chain G, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|H Chain H, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UL2|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
Length = 281
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 81 VDHAYQAGRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDE 140
V A GRA YS+PI++ D T T A LAF +VP
Sbjct: 62 VPTAGSLGRAFYSTPIQIWDNTTGTVA---SWATSFTFNLQAPNAASPADGLAFALVPVG 118
Query: 141 FTVGRAGPWLGIVN--DACEHYKVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADS 198
G +LG+ + + + AVEFD + + DP + H+GI++ + S KT
Sbjct: 119 SQPKDKGGFLGLFDSKNYASSNQTVAVEFDTFYNGGW-DPTERHIGIDVNSIKSIKTTSW 177
Query: 199 SESNASLHHDDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EY 255
+N + +V+ I YD N + L PSQ E+
Sbjct: 178 DFANG--ENAEVL----ITYDSSTNLLVASL-----VHPSQKTSFIVSERVDLTSVLPEW 226
Query: 256 MFVGFSASTGDSS---QIHSILSWEFFS 280
+ VGFSA+TG S + + +LSW F S
Sbjct: 227 VSVGFSATTGLSKGYVETNEVLSWSFAS 254
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 35/201 (17%)
Query: 378 KRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
K + ++ L + GV+ G VA+K ++ +V+ +S
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------ 57
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVG-VLPWSRRFELIKDVAESLSF 496
H L + G C R I+ +Y NG L +L + + E+ KDV E++ +
Sbjct: 58 --HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 115
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------- 535
L SK+ H +L + + ++ + D+G + SV SK
Sbjct: 116 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 175
Query: 536 -----KADVFGFGMLVLEIVS 551
K+D++ FG+L+ EI S
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYS 196
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 35/201 (17%)
Query: 378 KRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
K + ++ L + GV+ G VA+K ++ +V+ +S
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------ 77
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVG-VLPWSRRFELIKDVAESLSF 496
H L + G C R I+ +Y NG L +L + + E+ KDV E++ +
Sbjct: 78 --HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------- 535
L SK+ H +L + + ++ + D+G + SV SK
Sbjct: 136 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 195
Query: 536 -----KADVFGFGMLVLEIVS 551
K+D++ FG+L+ EI S
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYS 216
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 55 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 173
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 174 PPEMIEGR 181
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 386 LASDTRGVLYRGTLPNGCYVAVKRFS-SNEFLHLSRLDWTR-VLKRISSITTNVPCHPNL 443
++S R ++R T G AVK + E L +L+ R +R + I V HP++
Sbjct: 106 VSSVVRRCVHRAT---GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHI 162
Query: 444 APIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELT 503
+ + +V+D + G L +L L +++ + E++SFLH+ +
Sbjct: 163 ITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIV 222
Query: 504 HGNLKSSSVFLDVNCKAVLGDYGF 527
H +LK ++ LD N + L D+GF
Sbjct: 223 HRDLKPENILLDDNMQIRLSDFGF 246
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 72 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 130
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 131 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 190
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 191 PPEMIEGR 198
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 59 LRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 117
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 177
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 178 PPEMIEGR 185
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 58 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 176
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 177 PPEMIEGR 184
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 54 LRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 112
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 113 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 172
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 173 PPEMIEGR 180
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 52 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 110
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 111 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 170
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 171 PPEMIEGR 178
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 35/201 (17%)
Query: 378 KRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
K + ++ L + GV+ G VA+K ++ +V+ +S
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------ 61
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVG-VLPWSRRFELIKDVAESLSF 496
H L + G C R I+ +Y NG L +L + + E+ KDV E++ +
Sbjct: 62 --HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------- 535
L SK+ H +L + + ++ + D+G + SV SK
Sbjct: 120 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 179
Query: 536 -----KADVFGFGMLVLEIVS 551
K+D++ FG+L+ EI S
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 35/201 (17%)
Query: 378 KRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
K + ++ L + GV+ G VA+K ++ +V+ +S
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------ 62
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVG-VLPWSRRFELIKDVAESLSF 496
H L + G C R I+ +Y NG L +L + + E+ KDV E++ +
Sbjct: 63 --HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------- 535
L SK+ H +L + + ++ + D+G + SV SK
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 180
Query: 536 -----KADVFGFGMLVLEIVS 551
K+D++ FG+L+ EI S
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYS 201
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 58 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 176
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 177 PPEMIEGR 184
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 60 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 178
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 179 PPEMIEGR 186
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 35/201 (17%)
Query: 378 KRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
K + ++ L + GV+ G VA+K ++ +V+ +S
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------ 68
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVG-VLPWSRRFELIKDVAESLSF 496
H L + G C R I+ +Y NG L +L + + E+ KDV E++ +
Sbjct: 69 --HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 126
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------- 535
L SK+ H +L + + ++ + D+G + SV SK
Sbjct: 127 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 186
Query: 536 -----KADVFGFGMLVLEIVS 551
K+D++ FG+L+ EI S
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYS 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 55 LRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYL 173
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 174 PPEMIEGR 181
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G + + L + R
Sbjct: 60 LRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY 118
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYL 178
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 179 PPEMIEGR 186
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGV-GVLPWSRRFELIKDVAESLSFLH 498
HPN+ G ++ + +Y + G+L + + PWS+R KD+A +++LH
Sbjct: 66 HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSK 535
S + H +L S + + N V+ D+G V K
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 441 PNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSK 500
P + P+ G + I + + GSL + + G LP R + E L +LHS+
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 204
Query: 501 ELTHGNLKSSSVFLDVN-CKAVLGDYGFFMGSVSSKKADVFGFGMLVLEIVSGKRTELEE 559
+ HG++K+ +V L + A L D+G + + D G +L + + G T +
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAV----CLQPDGLGKSLLTGDYIPGTETHMAP 260
Query: 560 EITDVLG 566
E+ VLG
Sbjct: 261 EV--VLG 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 57 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYL 175
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 176 PPEMIEGR 183
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZVX|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZYR|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
pdb|3ZYR|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
Length = 261
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 33/166 (19%)
Query: 132 LAFVIVPDEFTV--GRAGPWLGIVNDAC----EHYKVFAVEFDN--SNDPNFGDPNDDHV 183
+AF I P + T+ G AG LG+ N +V AVEFD + + N DPN H+
Sbjct: 97 IAFFIAPPDTTIPSGSAGGLLGLFNPRTALNESANQVLAVEFDTFFAQNSNTWDPNYQHI 156
Query: 184 GINLGTAVSFKTADSSESNASLHHDDVVHRAWIRY--------DGHRNWIEIYLGVDGDT 235
GI++ + S K + V + R DG R ++ VD T
Sbjct: 157 GIDVNSIRSSKVVRWERREGKTLNVLVTYNPSTRTIDVVATYPDGQR--YQLSHVVDLTT 214
Query: 236 VPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFST 281
+ E++ VGFSA++G+ Q H++ SW F ST
Sbjct: 215 I---------------LPEWVRVGFSAASGEQFQTHNLESWSFTST 245
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 58 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYL 176
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 177 PPEMIEGR 184
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 55 LRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYL 173
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 174 PPEMIEGR 181
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G + + L + R
Sbjct: 60 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY 118
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 178
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 179 PPEMIEGR 186
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 78/201 (38%), Gaps = 35/201 (17%)
Query: 378 KRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
K + ++ L + GV+ G VA+K ++ +V+ +S
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------ 77
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVG-VLPWSRRFELIKDVAESLSF 496
H L + G C R I+ +Y NG L +L + + E+ KDV E++ +
Sbjct: 78 --HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------------------------FMG 530
L SK+ H +L + + ++ + D+G M
Sbjct: 136 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMY 195
Query: 531 SVSSKKADVFGFGMLVLEIVS 551
S S K+D++ FG+L+ EI S
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYS 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 441 PNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSK 500
P + P+ G + I + + GSL + + G LP R + E L +LHS+
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 185
Query: 501 ELTHGNLKSSSVFLDVN-CKAVLGDYGFFMGSVSSKKADVFGFGMLVLEIVSGKRTELEE 559
+ HG++K+ +V L + A L D+G + + D G +L + + G T +
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAV----CLQPDGLGKDLLTGDYIPGTETHMAP 241
Query: 560 EITDVLG 566
E+ VLG
Sbjct: 242 EV--VLG 246
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 56 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYL 174
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 175 PPEMIEGR 182
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|B Chain B, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|C Chain C, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|D Chain D, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|E Chain E, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|F Chain F, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|G Chain G, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|H Chain H, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1LU2|A Chain A, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU2|B Chain B, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU1|A Chain A, The Structure Of The Dolichos Biflorus Seed Lectin In
Complex With The Forssman Disaccharide
Length = 253
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 100/247 (40%), Gaps = 37/247 (14%)
Query: 48 FSNFTSNYEIKLLGNASISQDKGFIQ------IPDPSPAVDHAYQAGRAIYSSPIRLLDP 101
F NF S I L G+A++S K + IP PS GRA YSSPI++ D
Sbjct: 8 FKNFNSPSFI-LQGDATVSSGKLQLTKVKENGIPTPS-------SLGRAFYSSPIQIYDK 59
Query: 102 LTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDAC--EH 159
T A +AF +VP R G +LG+ +
Sbjct: 60 STGAVA---SWATSFTVKISAPSKASFADGIAFALVPVGSEPRRNGGYLGVFDSDVYNNS 116
Query: 160 YKVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYD 219
+ AVEFD ++ + DP+ H+GI++ + S T +N + +++ I Y+
Sbjct: 117 AQTVAVEFDTLSNSGW-DPSMKHIGIDVNSIKSIATVSWDLANG--ENAEIL----ITYN 169
Query: 220 GHRNWIEIYLGVDGDTVPSQXXX---XXXXXXXXXXXEYMFVGFSASTGDSS---QIHSI 273
+ + L PS+ EY+ VGFSA+TG S + H +
Sbjct: 170 AATSLLVASL-----VHPSRRTSYILSERVDITNELPEYVSVGFSATTGLSEGYIETHDV 224
Query: 274 LSWEFFS 280
LSW F S
Sbjct: 225 LSWSFAS 231
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 78/201 (38%), Gaps = 35/201 (17%)
Query: 378 KRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
K + ++ L + GV+ G VA+K ++ +V+ +S
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------ 62
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVG-VLPWSRRFELIKDVAESLSF 496
H L + G C R I+ +Y NG L +L + + E+ KDV E++ +
Sbjct: 63 --HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------------------------FMG 530
L SK+ H +L + + ++ + D+G M
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMY 180
Query: 531 SVSSKKADVFGFGMLVLEIVS 551
S S K+D++ FG+L+ EI S
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYS 201
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 56 LRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + SS++ + G L
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYL 174
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 175 PPEMIEGR 182
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 60 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + D+G+ + + SS++ + G L
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 178
Query: 546 VLEIVSGK 553
E + G+
Sbjct: 179 PPEXIEGR 186
>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1FX5|B Chain B, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1JXN|A Chain A, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|B Chain B, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|C Chain C, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|D Chain D, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
Length = 242
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Query: 132 LAFVIVPDEFTVGRAGPWLGIVNDA-CE-HYKVFAVEFDNSNDP-NFGDPNDDHVGINLG 188
L F + P + + RAG + G+ ND C+ Y+ AVEFD P NF DP H+GI++
Sbjct: 89 LTFFLAPPDSPLRRAGGYFGLFNDTKCDSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVN 148
Query: 189 TAVSFKTADSSESNASLHHDDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXX 248
K+ ++ N ++V + I Y+ + L D +
Sbjct: 149 CV---KSINAERWNKRYGLNNVANVE-IIYEASSKTLTASLTYPSDQ--TSISVTSIVDL 202
Query: 249 XXXXXEYMFVGFSASTGDSSQ-IHSILSWEFFST 281
E++ VGFS ST Q H +L+W F ST
Sbjct: 203 KEILPEWVSVGFSGSTYIGRQATHEVLNWYFTST 236
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N-
Acetylgalactosamine
pdb|3N36|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Galactose
pdb|3N3H|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Citrate
Length = 242
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 95/256 (37%), Gaps = 39/256 (15%)
Query: 48 FSNFTSNYEIKLLGNASISQDKGFIQIP----DPSPAVDHAYQAGRAIYSSPIRLLDPLT 103
FS F + L AS+ G +Q+ + PA D GR +Y+ P+ + D T
Sbjct: 8 FSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDST---GRTLYAKPVHIWDMTT 64
Query: 104 ATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDACEH--YK 161
T A L F + P + + G +LGI N++ + Y+
Sbjct: 65 GTVASFETRFSFSIEQPYTRPLPADG--LVFFMGPTKSKPAQGGGYLGIFNNSKQDNSYQ 122
Query: 162 VFAVEFD---NSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRY 218
VEFD N DP P H+GI++ + S KT N V I+Y
Sbjct: 123 TLGVEFDTFSNQWDP----PQVPHIGIDVNSIRSIKTQPFQLDNGQ------VANVVIKY 172
Query: 219 DGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EYMFVGFSASTG---DSSQIHS 272
D + L PS E++ VG S +TG D+++ H
Sbjct: 173 DASSKILHAVL-----VYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHD 227
Query: 273 ILSWEFFSTSQAMLNE 288
+ SW F QA L E
Sbjct: 228 VYSWSF----QASLPE 239
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 58 LRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + ++G+ + + SS++ + G L
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYL 176
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 177 PPEMIEGR 184
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
L+R I +++ HPN+ + G+ D ++ +Y G++ R L + R
Sbjct: 57 LRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGML 545
I ++A +LS+ HSK + H ++K ++ L + + ++G+ + + SS++ + G L
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYL 175
Query: 546 VLEIVSGK 553
E++ G+
Sbjct: 176 PPEMIEGR 183
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With 2'-Alpha-L-Fucosyllactose
pdb|1GZC|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With Lactose
Length = 239
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 100/254 (39%), Gaps = 35/254 (13%)
Query: 48 FSNF-TSNYEIKLLGNASISQDKGFIQIP----DPSPAVDHAYQAGRAIYSSPIRLLDPL 102
FS F N + L G A I+Q G +Q+ + PA D GR +Y+ P+ + D
Sbjct: 8 FSEFEPGNDNLTLQGAALITQ-SGVLQLTKINQNGMPAWDST---GRTLYTKPVHMWDST 63
Query: 103 TATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDACEH--Y 160
T T A L F + P + + +LG+ N++ + Y
Sbjct: 64 TGTVASFETRFSFSIEQPYTRPLPADG--LVFFMGPTKSKPAQGYGYLGVFNNSKQDNSY 121
Query: 161 KVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDG 220
+ AVEFD ++P + P H+GI++ + S KT N V I+YD
Sbjct: 122 QTLAVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQ------VANVVIKYDA 174
Query: 221 HRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EYMFVGFSASTG---DSSQIHSIL 274
+ + L PS +++ VG S +TG D+++ H +
Sbjct: 175 PSKILHVVL-----VYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVY 229
Query: 275 SWEFFSTSQAMLNE 288
SW F QA L E
Sbjct: 230 SWSF----QASLPE 239
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin
pdb|1UZY|B Chain B, Erythrina Crystagalli Lectin
pdb|1UZZ|A Chain A, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|B Chain B, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|C Chain C, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|D Chain D, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1V00|A Chain A, Erythrina Cristagalli Lectin
pdb|1V00|B Chain B, Erythrina Cristagalli Lectin
pdb|1V00|C Chain C, Erythrina Cristagalli Lectin
pdb|1V00|D Chain D, Erythrina Cristagalli Lectin
Length = 242
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 100/247 (40%), Gaps = 31/247 (12%)
Query: 48 FSNFT-SNYEIKLLGNASISQDKGFIQIP----DPSPAVDHAYQAGRAIYSSPIRLLDPL 102
FS F N ++ L G A I+Q G +Q+ + PA D GR +Y+ P+ + D
Sbjct: 8 FSEFEPGNNDLTLQGAAIITQ-SGVLQLTKINQNGMPAWD---STGRTLYTKPVHIWDMT 63
Query: 103 TATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDACEH--Y 160
T T A L F + P + + +LG+ N++ + Y
Sbjct: 64 TGTVASFETRFSFSIEQPYTRPLPADG--LVFFMGPTKSKPAQGYGYLGVFNNSKQDNSY 121
Query: 161 KVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDG 220
+ AVEFD ++P + P H+GI++ + S KT N V I+YD
Sbjct: 122 QTLAVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQ------VANVVIKYDA 174
Query: 221 HRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EYMFVGFSASTG---DSSQIHSIL 274
+I L V PS E++ VG S +TG D+++ H +
Sbjct: 175 SS---KILLAVL--VYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVY 229
Query: 275 SWEFFST 281
SW F ++
Sbjct: 230 SWSFHAS 236
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex
pdb|2BQP|B Chain B, The Structure Of The Pea Lectin-D-Glucopyranose Complex
Length = 234
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 77/199 (38%), Gaps = 15/199 (7%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA+YSSPI + D T A F I P + G
Sbjct: 42 GRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSYNVADG---FTFFIAPVDTKPQTGG 98
Query: 148 PWLGIVNDA--CEHYKVFAVEFDNSNDPNFGDPNDD-HVGINLGTAVSFKTADSSESNAS 204
+LG+ N A + + AVEFD + + N D H+GI++ + S T N
Sbjct: 99 GYLGVFNSAEYDKTTQTVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWKLQNG- 157
Query: 205 LHHDDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EYMFVGFS 261
+VV I ++ N + + L +++ + E++ +GFS
Sbjct: 158 -EEANVV----IAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFS 212
Query: 262 ASTGDSSQIHSILSWEFFS 280
A+TG H +LSW F S
Sbjct: 213 ATTGAEYAAHEVLSWSFHS 231
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked
Carbohydrate In Complex With Lactose
Length = 239
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 94/253 (37%), Gaps = 33/253 (13%)
Query: 48 FSNFTSNYEIKLLGNASISQDKGFIQIP----DPSPAVDHAYQAGRAIYSSPIRLLDPLT 103
FS F + L AS+ G +Q+ + PA D GR +Y+ P+ + D T
Sbjct: 8 FSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDST---GRTLYAKPVHIWDMTT 64
Query: 104 ATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDACEH--YK 161
T A L F + P + + +LGI N + + Y+
Sbjct: 65 GTVASFETRFSFSIEQPYTRPLPADG--LVFFMGPTKSKPAQGYGYLGIFNQSKQDNSYQ 122
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
VEFD ++P + P H+GI++ + S KT N V I+YD
Sbjct: 123 TLGVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQ------VANVVIKYDAS 175
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EYMFVGFSASTG---DSSQIHSILS 275
+ L PS E++ VG S +TG D+++ H + S
Sbjct: 176 SKLLHAVL-----VYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYS 230
Query: 276 WEFFSTSQAMLNE 288
W F QA L E
Sbjct: 231 WSF----QASLPE 239
>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8O|B Chain B, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8P|A Chain A, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8P|B Chain B, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8Q|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8Q|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8S|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8S|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8V|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1Q8V|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1UKG|A Chain A, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|1UKG|B Chain B, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|2GME|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GME|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GMM|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMM|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMP|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GMP|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GN3|A Chain A, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN3|B Chain B, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN7|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GN7|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GNB|A Chain A, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GNB|B Chain B, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GND|A Chain A, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GND|B Chain B, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GNM|A Chain A, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNM|B Chain B, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNT|A Chain A, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2GNT|B Chain B, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2AUY|A Chain A, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2AUY|B Chain B, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2PHF|A Chain A, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHF|B Chain B, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHR|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHR|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHT|A Chain A, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHT|B Chain B, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHU|A Chain A, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHU|B Chain B, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHW|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHW|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHX|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
pdb|2PHX|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
Length = 252
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 33/134 (24%)
Query: 161 KVFAVEFDN--SNDPNFGDPNDDHVGINLGTAVSFKTADSSES-----------NASLHH 207
+V AVEFD + D N DPN H+GI++ + S KT N S +
Sbjct: 123 QVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKWDRRDGQSLNVLVTFNPSTRN 182
Query: 208 DDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDS 267
DVV DG R E+ VD +V E++ VGFSA++G+
Sbjct: 183 LDVVA---TYSDGTR--YEVSYEVDVRSV---------------LPEWVRVGFSAASGEQ 222
Query: 268 SQIHSILSWEFFST 281
Q H++ SW F ST
Sbjct: 223 YQTHTLESWSFTST 236
>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3O|B Chain B, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3P|A Chain A, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3P|B Chain B, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3Q|A Chain A, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1N3Q|B Chain B, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1S1A|A Chain A, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|1S1A|B Chain B, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|2AR6|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2AR6|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2ARB|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARB|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARE|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARE|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARX|A Chain A, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
pdb|2ARX|B Chain B, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
Length = 252
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 61/134 (45%), Gaps = 33/134 (24%)
Query: 161 KVFAVEFDN--SNDPNFGDPNDDHVGINLGTAVSFKTA--DSSES---------NASLHH 207
+V AVEFD + D N DPN H+GI++ + S KT D + N S +
Sbjct: 123 QVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVKWDRRDGQSLNVLVTFNPSTRN 182
Query: 208 DDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDS 267
DVV DG R E+ VD +V E++ VGFSA++G+
Sbjct: 183 LDVVA---TYSDGTR--YEVSYEVDVRSV---------------LPEWVRVGFSAASGEQ 222
Query: 268 SQIHSILSWEFFST 281
Q H++ SW F ST
Sbjct: 223 YQTHTLESWSFTST 236
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Actylgalactosamine
pdb|1AX1|A Chain A, Erythrina Corallodendron Lectin In Complex With Lactose
pdb|1AX2|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Acetyllactosamine
pdb|1AXY|A Chain A, Erythrina Corallodendron Lectin
pdb|1AXZ|A Chain A, Erythrina Corallodendron Lectin In Complex With
D-Galactose
Length = 239
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 98/254 (38%), Gaps = 35/254 (13%)
Query: 48 FSNF-TSNYEIKLLGNASISQDKGFIQIP----DPSPAVDHAYQAGRAIYSSPIRLLDPL 102
FS F N + L G A I+Q G +Q+ + PA D GR +Y+ P+ + D
Sbjct: 8 FSEFEPGNDNLTLQGAALITQ-SGVLQLTKINQNGMPAWDST---GRTLYAKPVHIWDMT 63
Query: 103 TATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDACEH--Y 160
T T A L F + P + + +LGI N++ + Y
Sbjct: 64 TGTVASFETRFSFSIEQPYTRPLPADG--LVFFMGPTKSKPAQGYGYLGIFNNSKQDNSY 121
Query: 161 KVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDG 220
+ VEFD ++P + P H+GI++ + S KT N V I+YD
Sbjct: 122 QTLGVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQ------VANVVIKYDA 174
Query: 221 HRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EYMFVGFSASTG---DSSQIHSIL 274
+ L PS E++ VG S +TG D+++ H +
Sbjct: 175 SSKILHAVL-----VYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVY 229
Query: 275 SWEFFSTSQAMLNE 288
SW F QA L E
Sbjct: 230 SWSF----QASLPE 239
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 106/279 (37%), Gaps = 65/279 (23%)
Query: 380 FSKMEVLASDTRGVLYRGTLP-NGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVP 438
F ++ L GV++ + C A+KR L+R R +K ++ +
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLE---- 61
Query: 439 CHPNLAP-IRGWCCDNRETII------VYDYYQ-----NGSLDRWLFGVGVLPWSRR--- 483
HP + W N + VY Y Q +L W+ G + R
Sbjct: 62 -HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 484 FELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFF--------------- 528
+ +AE++ FLHSK L H +LK S++F ++ +GD+G
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 529 -------MGSVSSK---------------KADVFGFGMLVLEIVSGKRTELE--EEITDV 564
G V +K K D+F G+++ E++ T++E +TDV
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDV 240
Query: 565 --LGFAWAMHEK--GEMVNVIDERMKSNMNLEQAIRVLE 599
L F +K E V V D S M +AI ++E
Sbjct: 241 RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
pdb|1FYU|B Chain B, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
Length = 255
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 98/254 (38%), Gaps = 35/254 (13%)
Query: 48 FSNF-TSNYEIKLLGNASISQDKGFIQIP----DPSPAVDHAYQAGRAIYSSPIRLLDPL 102
FS F N + L G A I+Q G +Q+ + PA D GR +Y+ P+ + D
Sbjct: 8 FSEFEPGNDNLTLQGAALITQ-SGVLQLTKINQNGMPAWD---STGRTLYAKPVHIWDMT 63
Query: 103 TATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDACEH--Y 160
T T A L F + P + + +LGI N++ + Y
Sbjct: 64 TGTVASFETRFSFSIEQPYTRPLPADG--LVFFMGPTKSKPAQGYGYLGIFNNSKQDNSY 121
Query: 161 KVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDG 220
+ VEFD ++P + P H+GI++ + S KT N V I+YD
Sbjct: 122 QTLGVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQ------VANVVIKYDA 174
Query: 221 HRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EYMFVGFSASTG---DSSQIHSIL 274
+ L PS E++ VG S +TG D+++ H +
Sbjct: 175 SSKILHAVL-----VYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVY 229
Query: 275 SWEFFSTSQAMLNE 288
SW F QA L E
Sbjct: 230 SWSF----QASLPE 239
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia.
pdb|1FNZ|A Chain A, A Bark Lectin From Robinia Pseudoacacia In Complex With N-
Acetylgalactosamine
Length = 237
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 17/236 (7%)
Query: 48 FSNFTSNYEIKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATPA 107
F F N + ++ G +Q+ + V + GRA+Y++P ++ D T A
Sbjct: 8 FPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVA 67
Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDAC--EHYKVFAV 165
LAF + P + G LGI D + ++ AV
Sbjct: 68 SFVTSFTFIIQAPNPATTADG---LAFFLAPVDTQPLDLGGMLGIFKDGYFNKSNQIVAV 124
Query: 166 EFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGHRNWI 225
EFD ++ ++ DP H+GIN+ + S KT + +N V +I Y+ +
Sbjct: 125 EFDTFSNGDW-DPKGRHLGINVNSIESIKTVPWNWTNGE------VANVFISYEASTKSL 177
Query: 226 EIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSS---QIHSILSWEF 278
L ++ + E++ GFSA+TG Q + +LSW F
Sbjct: 178 TASLVY--PSLETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSF 231
>pdb|2YZ4|A Chain A, The Neutron Structure Of Concanavalin A At 2.2 Angstroms
Length = 237
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 22/160 (13%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D + + GDP+ H+GI++ + S KTA + N + +++ + D
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNS---VDKR 60
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFST 281
+ + Y D TV E++ VG SASTG + ++ILSW F S
Sbjct: 61 LSAVVSYPNADSATV------SYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSK 114
Query: 282 SQAMLNEPPSHICRQNIAHQVSK-YSMTNQISRPSSFLIF 320
+ N H+ + + M NQ S+ LI
Sbjct: 115 ------------LKSNSTHETNALHFMFNQFSKDQKDLIL 142
>pdb|2CTV|A Chain A, High Resolution Crystallographic Studies Of Native
Concanavalin A Using Rapid Laue Data Collection Methods
And The Introduction Of A Monochromatic Large-Angle
Oscillation Technique (Lot)
pdb|1CON|A Chain A, The Refined Structure Of Cadmium Substituted Concanavalin
A At 2.0 Angstroms Resolution
pdb|5CNA|A Chain A, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|B Chain B, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|C Chain C, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|D Chain D, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|1APN|A Chain A, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1APN|B Chain B, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1CVN|A Chain A, Concanavalin A Complexed To Trimannoside
pdb|1CVN|B Chain B, Concanavalin A Complexed To Trimannoside
pdb|1CVN|C Chain C, Concanavalin A Complexed To Trimannoside
pdb|1CVN|D Chain D, Concanavalin A Complexed To Trimannoside
pdb|1ENS|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENS|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENQ|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|B Chain B, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|C Chain C, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|D Chain D, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1CES|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1CES|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1VAL|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAM|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VLN|A Chain A, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|B Chain B, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|C Chain C, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|D Chain D, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|E Chain E, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|F Chain F, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|G Chain G, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|H Chain H, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1GIC|A Chain A, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1GIC|B Chain B, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1TEI|A Chain A, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|B Chain B, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|C Chain C, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|D Chain D, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|E Chain E, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|F Chain F, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|G Chain G, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|H Chain H, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1ONA|A Chain A, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|B Chain B, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|C Chain C, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|D Chain D, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1CJP|A Chain A, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|B Chain B, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|C Chain C, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|D Chain D, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1BXH|A Chain A, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|B Chain B, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|C Chain C, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|D Chain D, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1QGL|A Chain A, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QGL|B Chain B, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QDC|A Chain A, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|B Chain B, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|C Chain C, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|D Chain D, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|A Chain A, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|B Chain B, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|C Chain C, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|D Chain D, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1DQ0|A Chain A, Locked, Metal-Free Concanavalin A, A Minor Species In
Solution
pdb|1DQ1|A Chain A, Calcium;calcium Concanavalin A
pdb|1DQ2|A Chain A, Unlocked Metal-Free Concanavalin A
pdb|1DQ2|B Chain B, Unlocked Metal-Free Concanavalin A
pdb|1DQ4|A Chain A, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ4|B Chain B, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ5|A Chain A, Manganese;manganese Concanavalin A At Ph 5.0
pdb|1DQ6|A Chain A, Manganese;manganese Concanavalin A At Ph 7.0
pdb|1QNY|A Chain A, X-Ray Refinement Of D2o Soaked Crystal Of Concanavalin A
pdb|1C57|A Chain A, Direct Determination Of The Positions Of Deuterium Atoms
Of Bound Water In Concanavalin A By Neutron Laue
Crystallography
pdb|3ENR|A Chain A, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|3ENR|B Chain B, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|1I3H|A Chain A, Concanavalin A-Dimannose Structure
pdb|1GKB|A Chain A, Concanavalin A, New Crystal Form
pdb|1GKB|B Chain B, Concanavalin A, New Crystal Form
pdb|1JW6|A Chain A, Crystal Structure Of The Complex Of Concanavalin A And
Hexapeptide
pdb|1JOJ|A Chain A, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|B Chain B, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|C Chain C, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|D Chain D, Concanavalin A-Hexapeptide Complex
pdb|1JUI|A Chain A, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|B Chain B, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|C Chain C, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|D Chain D, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JYC|A Chain A, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|B Chain B, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|C Chain C, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|D Chain D, Concanavalin A15-Mer Peptide Complex
pdb|1JYI|A Chain A, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|B Chain B, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|C Chain C, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|D Chain D, Concanavalin A/12-mer Peptide Complex
pdb|1JN2|P Chain P, Crystal Structure Of Meso-Tetrasulphonatophenyl Porphyrin
Complexed With Concanavalin A
pdb|1HQW|A Chain A, Crystal Structure Of The Complex Of Concanavalin A With A
Tripeptide Ypy
pdb|1NXD|1 Chain 1, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|2 Chain 2, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|3 Chain 3, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|4 Chain 4, Crystal Structure Of Mnmn Concanavalin A
pdb|1XQN|A Chain A, The 15k Neutron Structure Of Saccharide-Free Concanavalin
A
pdb|2A7A|A Chain A, On The Routine Use Of Soft X-Rays In Macromolecular
Crystallography, Part Iii- The Optimal Data Collection
Wavelength
pdb|2G4I|A Chain A, Anomalous Substructure Of Concanavalin A
pdb|1ENR|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc And
Calcium Having A Zinc Ion Bound In The S1 Site And A
Calcium Ion Bound In The S2 Site
pdb|1JBC|A Chain A, Concanavalin A
pdb|1NLS|A Chain A, Concanavalin A And Its Bound Solvent At 0.94a Resolution
pdb|1SCR|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|1SCS|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|2ENR|A Chain A, Co-crystals Of Demetallized Concanavalin A With Cadmium
Having A Cadmium Ion Bound In Both The S1 Site And The
S2 Site
pdb|2UU8|A Chain A, X-Ray Structure Of Ni, Ca Concanavalin A At Ultra-High
Resolution (0.94a)
pdb|3D4K|A Chain A, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|B Chain B, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|C Chain C, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|D Chain D, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3NWK|A Chain A, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|B Chain B, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|C Chain C, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|D Chain D, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3QLQ|A Chain A, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|B Chain B, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|C Chain C, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|D Chain D, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
Length = 237
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 22/160 (13%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D + + GDP+ H+GI++ + S KTA + N + +++ + D
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNS---VDKR 60
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFST 281
+ + Y D TV E++ VG SASTG + ++ILSW F S
Sbjct: 61 LSAVVSYPNADSATV------SYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSK 114
Query: 282 SQAMLNEPPSHICRQNIAHQVSK-YSMTNQISRPSSFLIF 320
+ N H+ + + M NQ S+ LI
Sbjct: 115 ------------LKSNSTHETNALHFMFNQFSKDQKDLIL 142
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|B Chain B, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|C Chain C, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|D Chain D, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|E Chain E, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|F Chain F, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
Length = 239
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 94/256 (36%), Gaps = 39/256 (15%)
Query: 48 FSNFTSNYEIKLLGNASISQDKGFIQIP----DPSPAVDHAYQAGRAIYSSPIRLLDPLT 103
FS F + L AS+ G +Q+ + PA D GR +Y+ P+ + D T
Sbjct: 8 FSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDST---GRTLYAKPVHIWDMTT 64
Query: 104 ATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDACEH--YK 161
T A L F + P + + +LGI N++ + Y+
Sbjct: 65 GTVASFETRFSFSIEQPYTRPLPADG--LVFFMGPTKSKPAQGYGYLGIFNNSKQDNSYQ 122
Query: 162 VFAVEFD---NSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRY 218
VEFD N DP P H+GI++ + S KT N V I+Y
Sbjct: 123 TLGVEFDTFSNQWDP----PQVPHIGIDVNSIRSIKTQPFQLDNGQ------VANVVIKY 172
Query: 219 DGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EYMFVGFSASTG---DSSQIHS 272
D + L PS E++ VG S +TG D+++ H
Sbjct: 173 DASSKLLHAVL-----VYPSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHD 227
Query: 273 ILSWEFFSTSQAMLNE 288
+ SW F QA L E
Sbjct: 228 VYSWSF----QASLPE 239
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|B Chain B, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|C Chain C, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|D Chain D, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|E Chain E, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|F Chain F, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1G7Y|A Chain A, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|B Chain B, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|C Chain C, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|D Chain D, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|E Chain E, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|F Chain F, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
Length = 253
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 23/201 (11%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA YSSPI++ D T A +AF +VP
Sbjct: 46 GRAFYSSPIQIYDKSTGAVA---SWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNS 102
Query: 148 PWLGIVNDAC--EHYKVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASL 205
+LG+ + + AVEFD ++ ++ DP H+GI++ + S +TA +N
Sbjct: 103 GFLGVFDSDVYDNSAQTVAVEFDTFSNTDW-DPTSRHIGIDVNSIKSIRTASWGLANG-- 159
Query: 206 HHDDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXX---EYMFVGFSA 262
+ +++ I Y+ + + L PS+ EY+ +GFSA
Sbjct: 160 QNAEIL----ITYNAATSLLVASL-----VHPSRRTSYIVSERVDITNELPEYVSIGFSA 210
Query: 263 STGDS---SQIHSILSWEFFS 280
+TG S ++ H +LSW F S
Sbjct: 211 TTGLSEGYTETHDVLSWSFAS 231
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)
Length = 234
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 97/248 (39%), Gaps = 28/248 (11%)
Query: 48 FSNFTSNYEIKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATPA 107
++ F + + G+A I D G + +P P V+ A+Y++P+ + D T A
Sbjct: 5 YTRFKDDGSLIFQGDAKIWTD-GRLAMPT-DPLVNRT--TSHALYATPVPIWDSATGNVA 60
Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXLAFVIVP--DEFTVGRAGPWLGIVNDACEHYKVFAV 165
+ F + P E G +LGI + + + AV
Sbjct: 61 SFITSFSFIVSNVQRYPPTDG---VVFFLAPWGTEIPPNSQGGYLGITDSSNSQNQFVAV 117
Query: 166 EFDNSNDPNFGDPND---DHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGHR 222
EFD+ PN DP H+GI++ + +S K + + + SL +A I YD
Sbjct: 118 EFDSH--PNVWDPKSLRSSHIGIDVNSIMSLKAVNWNRVSGSL------EKATIIYDSDT 169
Query: 223 NWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSS-QIHSILSWEFFST 281
+ + + + + E + VGFSA+T + + H I SW F ST
Sbjct: 170 KILTVVMTHQNGQITT---ISQEIDLKTVLPEKVSVGFSATTWNPERERHDIYSWSFTST 226
Query: 282 SQAMLNEP 289
L EP
Sbjct: 227 ----LKEP 230
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + D R ++ +Y G L + L R +++++A++L + H
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFG-FGMLVLEIVSGK 553
K++ H ++K ++ L + + + D+G+ + + S ++ + G L E++ G+
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGR 196
>pdb|1WUV|A Chain A, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|D Chain D, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|G Chain G, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|J Chain J, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|2D7F|A Chain A, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|F Chain F, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|L Chain L, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|S Chain S, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2EF6|A Chain A, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|B Chain B, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|C Chain C, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|D Chain D, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2P2K|A Chain A, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|B Chain B, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|C Chain C, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|D Chain D, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
Length = 237
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D + + GDPN H+GI++ + S KTA + N + +++ + G
Sbjct: 4 IVAVELDTYPNTDIGDPNYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSV----GK 59
Query: 222 R-NWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFS 280
R + + Y D TV E++ VG SASTG + ++ILSW F S
Sbjct: 60 RLSAVVSYPNGDSATV------SYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
Query: 281 TSQAMLNEPPSHICRQNIAHQVSK-YSMTNQISRPSSFLIF 320
+ N H+ + + M NQ S+ LI
Sbjct: 114 K------------LKSNSTHETNALHFMFNQFSKDQKDLIL 142
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia))
Complex With Y Human Blood Group Determinant
pdb|1LEC|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
pdb|1LED|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
Length = 243
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 132 LAFVIVPDEFTVGRAGPWLGI-----VNDACEHYKVFAVEFDNSNDPNFGDPNDDHVGIN 186
LAF + P + +V G +LG+ D ++ +V AVEFD + ++ DP H+GI+
Sbjct: 91 LAFFLAPVDSSVKDYGGFLGLFRHETAADPSKN-QVVAVEFDTWINKDWNDPPYPHIGID 149
Query: 187 LGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGHRNWIEIYLGVD--GDTVPSQXXXXX 244
+ + VS T +A + + A I YD + + L + D + S
Sbjct: 150 VNSIVSVATTRWENDDA---YGSSIATAHITYDARSKILTVLLSYEHGRDYILSH----- 201
Query: 245 XXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFST 281
+ + +GFSA G ++ ILSW FFST
Sbjct: 202 VVDLAKVLPQKVRIGFSAGVG-YDEVTYILSWHFFST 237
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 79/203 (38%), Gaps = 35/203 (17%)
Query: 383 MEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPN 442
++ + S G+++ G N VA+K ++ V+ ++S HP
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS--------HPK 63
Query: 443 LAPIRGWCCDNRETIIVYDYYQNGSLDRWL-FGVGVLPWSRRFELIKDVAESLSFLHSKE 501
L + G C + +V+++ ++G L +L G+ + DV E +++L
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF--------------------------FMGSVSSK 535
+ H +L + + + N + D+G F S S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 536 KADVFGFGMLVLEIVSGKRTELE 558
K+DV+ FG+L+ E+ S + E
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus
pdb|1QNW|B Chain B, Lectin Ii From Ulex Europaeus
pdb|1QNW|C Chain C, Lectin Ii From Ulex Europaeus
pdb|1QNW|D Chain D, Lectin Ii From Ulex Europaeus
pdb|1QOO|A Chain A, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|B Chain B, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|C Chain C, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|D Chain D, Lectin Uea-Ii Complexed With Nag
pdb|1QOT|A Chain A, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|B Chain B, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|C Chain C, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|D Chain D, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOS|A Chain A, Lectin Uea-Ii Complexed With Chitobiose
pdb|1QOS|B Chain B, Lectin Uea-Ii Complexed With Chitobiose
pdb|1DZQ|A Chain A, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|B Chain B, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|C Chain C, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|D Chain D, Lectin Uea-Ii Complexed With Galactose
Length = 242
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 24/246 (9%)
Query: 48 FSNFTSNYE-IKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATP 106
F F N + I G+AS+S G +Q+ S + GRA+Y++PI++ D +T
Sbjct: 10 FDKFVPNQKNIIFQGDASVST-TGVLQVTKVSKPTTTSI--GRALYAAPIQIWDSITGKV 66
Query: 107 AXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVP--DEFTVGRAGPWLGIVNDACEHY--KV 162
A LAF + P + G + G+ + + ++
Sbjct: 67 A----SFATSFSFVVKADKSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKSSNQI 122
Query: 163 FAVEFDN--SNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDG 220
AVEFD N DP+ H+GI++ + S KT N + DVV I Y
Sbjct: 123 IAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKWDWRNGEVA--DVV----ITYRA 176
Query: 221 HRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQI--HSILSWEF 278
+ + L D + E++ VGFS G++++ H +LSW F
Sbjct: 177 PTKSLTVCLSYPSDG--TSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYF 234
Query: 279 FSTSQA 284
S +A
Sbjct: 235 TSNLEA 240
>pdb|1CN1|A Chain A, Crystal Structure Of Demetallized Concanavalin A. The
Metal- Binding Region
pdb|1CN1|B Chain B, Crystal Structure Of Demetallized Concanavalin A. The
Metal- Binding Region
pdb|3CNA|A Chain A, Structure Of Concanavalin A At 2.4 Angstroms Resolution
Length = 237
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 22/160 (13%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D + + GDP+ H+GI++ + S KTA + + + H + D
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQDGKVG---TAHIIYNSVDKR 60
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFST 281
+ + Y D +V E++ VG SASTG + ++ILSW F S
Sbjct: 61 LSAVVSYPNADATSV------SYDVDLNDVLPEWVRVGLSASTGLYKETNTILSWSFTSK 114
Query: 282 SQAMLNEPPSHICRQNIAHQVSK-YSMTNQISRPSSFLIF 320
+ N HQ + M NQ S+ LI
Sbjct: 115 ------------LKSNSTHQTDALHFMFNQFSKDQKDLIL 142
>pdb|2CNA|A Chain A, The Covalent And Three-Dimensional Structure Of
Concanavalin A, Iv.Atomic Coordinates,Hydrogen
Bonding,And Quaternary Structure
Length = 237
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 22/160 (13%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D + + GDP+ H+GI++ + S KTA + + + H + D
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQDGKVG---TAHIIYNSVDKR 60
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFST 281
+ + Y D +V E++ VG SASTG + ++ILSW F S
Sbjct: 61 LSAVVSYPNADATSV------SYDVDLNDVLPEWVRVGLSASTGLYKETNTILSWSFTSK 114
Query: 282 SQAMLNEPPSHICRQNIAHQVSK-YSMTNQISRPSSFLIF 320
+ N HQ + M NQ S+ LI
Sbjct: 115 ------------LKSNSTHQTDALHFMFNQFSKDQKDLIL 142
>pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum
Seeds In Complex With
5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose
Length = 236
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTA-----DSSESNASLHHDDVVHR--A 214
+ AVE D + + GDPN H+GIN+ + S T D A + ++ V R A
Sbjct: 4 IVAVELDTYPNTDIGDPNYQHIGINIKSIRSKATTRWNVQDGKVGTAHISYNSVAKRLSA 63
Query: 215 WIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSIL 274
+ Y G + Y VD + + E++ VG SASTG + ++IL
Sbjct: 64 IVSYPGGSSATVSY-DVDLNNI---------------LPEWVRVGLSASTGVYKETNTIL 107
Query: 275 SWEFFS 280
SW F S
Sbjct: 108 SWSFTS 113
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 427 LKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLF------------- 473
+R + + TN+ H ++ G C D I+V++Y ++G L+++L
Sbjct: 64 FQREAELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 122
Query: 474 ---GVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMG 530
G L S+ + +A + +L S+ H +L + + + N +GD+G
Sbjct: 123 PRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRD 182
Query: 531 SVSSKKADVFGFGML 545
S+ V G ML
Sbjct: 183 VYSTDYYRVGGHTML 197
>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|F Chain F, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|G Chain G, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|H Chain H, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
Length = 133
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
V AVEFD +P++GDPN H+GI++ + S TA N + H ++
Sbjct: 3 VVAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKWDWQNGKIA---TAHISYNSVSKR 59
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFST 281
+ Y G T+ E++ VG SASTG + +++ SW F S+
Sbjct: 60 LSVTSYYAGSKPATL------SYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSS 113
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 51/233 (21%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVK--RFSSNEFLHLSRLDWTRVLKRISS 432
++ +F ++E L + T +Y+G G YVA+K + S E + + ++K +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK- 61
Query: 433 ITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFG--VGVLPWSRRFELIK-- 488
H N+ + + +V+++ N L +++ VG P L+K
Sbjct: 62 -------HENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 489 --DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF------------------- 527
+ + L+F H ++ H +LK ++ ++ + LGD+G
Sbjct: 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLW 173
Query: 528 ------FMGSVS-SKKADVFGFGMLVLEIVSGKR----TELEEE---ITDVLG 566
MGS + S D++ G ++ E+++GK T EE+ I D++G
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMG 226
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 45/153 (29%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLP-----WSRRFELIKDVAESL 494
HPN+ +RG C +V ++ + G L+R L G + P W+ + +A +
Sbjct: 65 HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGM 118
Query: 495 SFLHSKELT---HGNLKSSSVFL-------DVNCKAV-LGDYGF---------------- 527
++LH + + H +LKSS++ + D++ K + + D+G
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAY 178
Query: 528 -------FMGSVSSKKADVFGFGMLVLEIVSGK 553
S+ SK +DV+ +G+L+ E+++G+
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|B Chain B, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|C Chain C, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|D Chain D, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3R|A Chain A, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|B Chain B, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|C Chain C, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|D Chain D, Cratylia Folibunda Seed Lectin At Acidic Ph
Length = 236
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTA-----DSSESNASLHHDDVVHR--A 214
+ AVE D + + GDPN H+GIN+ + S T D A + ++ V R A
Sbjct: 4 IVAVELDTYPNTDIGDPNYQHIGINIKSIRSKATTRWNVQDGKVGTAHISYNSVAKRLSA 63
Query: 215 WIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSIL 274
+ Y G + Y VD + + E++ VG SASTG + ++IL
Sbjct: 64 IVSYPGGSSATVSY-DVDLNNI---------------LPEWVRVGLSASTGLYKETNTIL 107
Query: 275 SWEFFS 280
SW F S
Sbjct: 108 SWSFTS 113
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 38 IRTNVTK-----HLFFSNFTSN-YEIKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAI 91
++TN T H F+ F+ N ++ L G+AS D G +Q+ S + GRA+
Sbjct: 115 LKTNSTADAQSLHFTFNQFSQNPKDLILQGDASTDSD-GNLQLTRVSNGSPQSNSVGRAL 173
Query: 92 YSSPIRLLD 100
Y +P+ + D
Sbjct: 174 YYAPVHVWD 182
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|B Chain B, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|C Chain C, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|D Chain D, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
Length = 233
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 93/244 (38%), Gaps = 36/244 (14%)
Query: 48 FSNFTSNYEIKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATPA 107
F+NF N +L ++ G +++ + GRA+Y++PI + D T
Sbjct: 8 FTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNTT---- 63
Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDAC--EHYKVFAV 165
LAF + P + G +LG+ D Y+ AV
Sbjct: 64 -LASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQARGGFLGLFADRAHDASYQTVAV 122
Query: 166 EFDNSNDPNFGDPNDDHVGINLGTAVSFKTAD-----SSESNASLHHDDVVH--RAWIRY 218
EFD + N DPN H+GI+ S KT ++N + + A + +
Sbjct: 123 EFDTYS--NAWDPNYTHIGIDTNGIESKKTTPFDMVYGEKANIVITYQASTKALAASLVF 180
Query: 219 DGHRNWIEIYLGVD-GDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSS---QIHSIL 274
+ + VD D +P EY+ VGFSA+TG ++ + H I+
Sbjct: 181 PVSQTSYAVSARVDLRDILP----------------EYVRVGFSATTGLNAGVVETHDIV 224
Query: 275 SWEF 278
SW F
Sbjct: 225 SWSF 228
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 429 RISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVG------------ 476
R + + TN+ H ++ G C + I+V++Y ++G L+++L G
Sbjct: 64 REAELLTNLQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP 122
Query: 477 -VLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSK 535
L S+ + + +A + +L S+ H +L + + + N +GD+G S+
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 182
Query: 536 KADVFGFGML 545
V G ML
Sbjct: 183 YYRVGGHTML 192
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFG-VGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G R +IV +Y +NGSLD +L G + +++ V + +L
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
H +L + +V +D N + D+G
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFG-VGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G R +IV +Y +NGSLD +L G + +++ V + +L
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
H +L + +V +D N + D+G
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 77/200 (38%), Gaps = 35/200 (17%)
Query: 386 LASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAP 445
+ S G+++ G N VA+K ++ V+ ++S HP L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLS--------HPKLVQ 86
Query: 446 IRGWCCDNRETIIVYDYYQNGSLDRWL-FGVGVLPWSRRFELIKDVAESLSFLHSKELTH 504
+ G C + +V+++ ++G L +L G+ + DV E +++L + H
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 146
Query: 505 GNLKSSSVFLDVNCKAVLGDYGF--------------------------FMGSVSSKKAD 538
+L + + + N + D+G F S S K+D
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 539 VFGFGMLVLEIVSGKRTELE 558
V+ FG+L+ E+ S + E
Sbjct: 207 VWSFGVLMWEVFSEGKIPYE 226
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 79/203 (38%), Gaps = 35/203 (17%)
Query: 383 MEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPN 442
++ + S G+++ G N VA+K ++ V+ ++S HP
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS--------HPK 63
Query: 443 LAPIRGWCCDNRETIIVYDYYQNGSLDRWL-FGVGVLPWSRRFELIKDVAESLSFLHSKE 501
L + G C + +V+++ ++G L +L G+ + DV E +++L
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF--------------------------FMGSVSSK 535
+ H +L + + + N + D+G F S S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 536 KADVFGFGMLVLEIVSGKRTELE 558
K+DV+ FG+L+ E+ S + E
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 39/121 (32%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFF--------------------- 528
+AE++ FLHSK L H +LK S++F ++ +GD+G
Sbjct: 173 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAT 232
Query: 529 -MGSVSSK---------------KADVFGFGMLVLEIVSGKRTELEEE--ITDVLGFAWA 570
G V +K K D+F G+++ E++ T++E ITDV +
Sbjct: 233 HXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFP 292
Query: 571 M 571
+
Sbjct: 293 L 293
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 77/200 (38%), Gaps = 35/200 (17%)
Query: 386 LASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAP 445
+ S G+++ G N VA+K ++ V+ ++S HP L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS--------HPKLVQ 64
Query: 446 IRGWCCDNRETIIVYDYYQNGSLDRWL-FGVGVLPWSRRFELIKDVAESLSFLHSKELTH 504
+ G C + +V+++ ++G L +L G+ + DV E +++L + H
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124
Query: 505 GNLKSSSVFLDVNCKAVLGDYGF--------------------------FMGSVSSKKAD 538
+L + + + N + D+G F S S K+D
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 539 VFGFGMLVLEIVSGKRTELE 558
V+ FG+L+ E+ S + E
Sbjct: 185 VWSFGVLMWEVFSEGKIPYE 204
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 376 ATKRFSKMEVLASDTRGVLYRGTLP-NGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
AT R+ + + G +Y+ P +G +VA+K + E L +S + +L+R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 432 SITTNVPCHPNLAPIRGWCCDNR--ETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKD 489
+ HPN+ + C +R I V +++ D + P E IKD
Sbjct: 62 AFE-----HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 490 VAES----LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGFGML 545
+ L FLH+ + H +LK ++ + L D+G A ++ + M
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL---------ARIYSYQMA 167
Query: 546 VLEIV 550
+ +V
Sbjct: 168 LFPVV 172
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 79/203 (38%), Gaps = 35/203 (17%)
Query: 383 MEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPN 442
++ + S G+++ G N VA+K ++ V+ ++S HP
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS--------HPK 66
Query: 443 LAPIRGWCCDNRETIIVYDYYQNGSLDRWL-FGVGVLPWSRRFELIKDVAESLSFLHSKE 501
L + G C + +V+++ ++G L +L G+ + DV E +++L
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF--------------------------FMGSVSSK 535
+ H +L + + + N + D+G F S S
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 536 KADVFGFGMLVLEIVSGKRTELE 558
K+DV+ FG+L+ E+ S + E
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIPYE 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 410 FSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLD 469
FS+ E L V I V HPN+ ++ N +V+D + G L
Sbjct: 58 FSAEEVQELREATLKEV-----DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF 112
Query: 470 RWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+L L ++++ + E + LH + H +LK ++ LD + L D+GF
Sbjct: 113 DYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 36/107 (33%)
Query: 483 RFELIK------DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------- 527
+FE+IK A+ + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 120 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 179
Query: 528 ------FMGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 180 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 410 FSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLD 469
FS+ E L V I V HPN+ ++ N +V+D + G L
Sbjct: 58 FSAEEVQELREATLKEV-----DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF 112
Query: 470 RWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+L L ++++ + E + LH + H +LK ++ LD + L D+GF
Sbjct: 113 DYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 36/107 (33%)
Query: 483 RFELIK------DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------- 527
+FE+IK A+ + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 127 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 186
Query: 528 ------FMGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 187 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 36/107 (33%)
Query: 483 RFELIK------DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------- 527
+FE+IK A+ + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 528 ------FMGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 36/107 (33%)
Query: 483 RFELIK------DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------- 527
+FE+IK A+ + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 102 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 161
Query: 528 ------FMGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 162 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 36/107 (33%)
Query: 483 RFELIK------DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------- 527
+FE+IK A+ + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 528 ------FMGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 36/107 (33%)
Query: 483 RFELIK------DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------- 527
+FE+IK A+ + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 187
Query: 528 ------FMGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 36/107 (33%)
Query: 483 RFELIK------DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------- 527
+FE+IK A+ + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 187
Query: 528 ------FMGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 36/107 (33%)
Query: 483 RFELIK------DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------- 527
+FE+IK A+ + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 105 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 528 ------FMGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 165 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 42/101 (41%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + ++ +Y G + +L G + + + ++ + H
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVF 540
K + H +LK+ ++ LD + + D+GF K D F
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF 173
>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
pdb|1IOA|B Chain B, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
Length = 240
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 47/265 (17%)
Query: 48 FSNFTSNYEIKLLGNASISQDKGFIQI----PDPSPAVDHAYQAGRAIYSSPIRLLDPLT 103
F NF ++ ++ L GNA+IS KG +Q+ + P VD GRA YS PI++ D
Sbjct: 8 FPNFHTDDKLILQGNATISS-KGQLQLTGVGSNELPRVD---SLGRAFYSDPIQIKD--- 60
Query: 104 ATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAGPWLGIVNDACEHYKVF 163
LAF +VP + +LGI
Sbjct: 61 --SNNVASFNTNFTFIIRAKNQSISAYGLAFALVPVNSPPQKKQEFLGIF---------- 108
Query: 164 AVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSS------ESNASLH-HDDVVHRAWI 216
N+N+P +PN V + T + D + N H ++ I
Sbjct: 109 -----NTNNP---EPNARTVAVVFNTFKNRIDFDKNFIKPYVNENCDFHKYNGEKTDVQI 160
Query: 217 RYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTG---DSSQIHSI 273
YD N + ++L V + E++ VGFS ++G D+++ H +
Sbjct: 161 TYDSSNNDLRVFLHFTVSQV--KCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDV 218
Query: 274 LSWEFFSTSQAMLNEPPSHICRQNI 298
LSW F S + L S+I NI
Sbjct: 219 LSWSFSSKFRNKL----SNILLNNI 239
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 410 FSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLD 469
FS+ E L V I V HPN+ ++ N +V+D + G L
Sbjct: 45 FSAEEVQELREATLKEV-----DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF 99
Query: 470 RWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+L L ++++ + E + LH + H +LK ++ LD + L D+GF
Sbjct: 100 DYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 157
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 36/107 (33%)
Query: 483 RFELIK------DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------- 527
+FE+IK A+ + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 159
Query: 528 ------FMGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 42/101 (41%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + ++ +Y G + +L G + + + ++ + H
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVF 540
K + H +LK+ ++ LD + + D+GF K D F
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF 170
>pdb|1AZD|A Chain A, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|B Chain B, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|C Chain C, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|D Chain D, Concanavalin From Canavalia Brasiliensis
pdb|3JU9|A Chain A, Crystal Structure Of A Lectin From Canavalia Brasiliensis
Seed (conbr) Complexed With Alpha-aminobutyric Acid
pdb|4H55|A Chain A, Crystal Structure Of Canavalia Brasiliensis Seed Lectin
(Conbr) In Complex With Beta-D-Ribofuranose
Length = 237
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D + + GDP+ H+GI++ + S KTA + N + +++ + G
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSV----GK 59
Query: 222 R-NWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFS 280
R + + Y D TV E++ VG SASTG + ++ILSW F S
Sbjct: 60 RLSAVVSYPNGDSATV------SYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
Query: 281 TSQAMLNEPPSHICRQNIAHQVSK-YSMTNQISRPSSFLIF 320
+ N H+ + + M NQ S+ LI
Sbjct: 114 K------------LKSNSTHETNALHFMFNQFSKDQKDLIL 142
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 36/107 (33%)
Query: 483 RFELIK------DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------- 527
+FE+IK A+ + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 105 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 528 ------FMGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 165 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2OVU|A Chain A, Crystal Strucure Of A Lectin From Canavalia Gladiata (Cgl)
In Complex With Man1-2man-Ome
Length = 237
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D + + GDP+ H+GI++ + S KTA + N + +++ + G
Sbjct: 4 IVAVELDTYPNTDIGDPDYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSV----GK 59
Query: 222 R-NWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFS 280
R + + Y D TV E++ VG SASTG + ++ILSW F S
Sbjct: 60 RLSAVVSYPNGDSATV------SYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
Query: 281 TSQAMLNEPPSHICRQNIAHQVSK-YSMTNQISRPSSFLIF 320
+ N H+ + + M NQ S+ LI
Sbjct: 114 K------------LKSNSTHETNALHFMFNQFSKDQKDLIL 142
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 376 ATKRFSKMEVLASDTRGVLYRGTLP-NGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
AT R+ + + G +Y+ P +G +VA+K + E L +S + +L+R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 432 SITTNVPCHPNLAPIRGWCCDNR--ETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKD 489
+ HPN+ + C +R I V +++ D + P E IKD
Sbjct: 62 AFE-----HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 490 VAES----LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L FLH+ + H +LK ++ + L D+G
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 376 ATKRFSKMEVLASDTRGVLYRGTLP-NGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
AT R+ + + G +Y+ P +G +VA+K + E L +S + +L+R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 432 SITTNVPCHPNLAPIRGWCCDNR--ETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKD 489
+ HPN+ + C +R I V +++ D + P E IKD
Sbjct: 62 AFE-----HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 116
Query: 490 VAES----LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGFGML 545
+ L FLH+ + H +LK ++ + L D+G A ++ + M
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL---------ARIYSYQMA 167
Query: 546 VLEIV 550
+ +V
Sbjct: 168 LAPVV 172
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 94/224 (41%), Gaps = 41/224 (18%)
Query: 369 EILELYR-------ATKRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKRFSSNEFLHLSR 420
EILE R K++++ E + G +Y + G VA+++ + + +
Sbjct: 5 EILEKLRIIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-----Q 59
Query: 421 LDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPW 480
++ I + N +PN+ E +V +Y GSL + +
Sbjct: 60 PKKELIINEILVMRENK--NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDE 116
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF------------- 527
+ + ++ ++L FLHS ++ H N+KS ++ L ++ L D+GF
Sbjct: 117 GQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 176
Query: 528 FMGS-------VSSKKA-----DVFGFGMLVLEIVSGKRTELEE 559
+G+ V ++KA D++ G++ +E++ G+ L E
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 220
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 477 VLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFF 528
VL ++ ++ +++ + + +LH+K + H +LKS +VF D N K V+ D+G F
Sbjct: 126 VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLF 176
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 42/101 (41%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + +V +Y G + +L G + + + ++ + H
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVF 540
K + H +LK+ ++ LD + + D+GF K D F
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 23/96 (23%)
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFF--MGSVSSK 535
LP ++ + ++D +L+ LHS+ L H ++K +++FL + LGD+G +G+ +
Sbjct: 154 LPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213
Query: 536 K---------------------ADVFGFGMLVLEIV 550
+ ADVF G+ +LE+
Sbjct: 214 EVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVA 249
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 42/101 (41%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + +V +Y G + +L G + + + ++ + H
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVF 540
K + H +LK+ ++ LD + + D+GF K D F
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF 173
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 42/101 (41%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + +V +Y G + +L G + + + ++ + H
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVF 540
K + H +LK+ ++ LD + + D+GF K D F
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 42/101 (41%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + +V +Y G + +L G + + + ++ + H
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVF 540
K + H +LK+ ++ LD + + D+GF K D F
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV +Y +NGSLD +L F V L +++ +A
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 42/101 (41%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + +V +Y G + +L G + + + ++ + H
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVF 540
K + H +LK+ ++ LD + + D+GF K D F
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAF 172
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 446 IRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHG 505
I+ C+NR +YD + +L++ + L + + E+LS++HS+ + H
Sbjct: 92 IQXEYCENR---TLYDLIHSENLNQ--------QRDEYWRLFRQILEALSYIHSQGIIHR 140
Query: 506 NLKSSSVFLDVNCKAVLGDYGF 527
NLK ++F+D + +GD+G
Sbjct: 141 NLKPXNIFIDESRNVKIGDFGL 162
>pdb|2ZBJ|A Chain A, Crystal Structure Of Dioclea Rostrata Lectin
Length = 237
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D+ + + GDPN H+GI++ S ++ ++ N VH ++
Sbjct: 4 IVAVELDSYPNTDIGDPNYPHIGIDIK---SIRSKSTARWNMQTGKVGTVHISYNSVAKR 60
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFS 280
+ + Y G TV E++ VG SA+TG + ++ILSW F S
Sbjct: 61 LSAVVSYTGSSSTTV------SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
>pdb|2PEL|A Chain A, Peanut Lectin
pdb|2PEL|B Chain B, Peanut Lectin
pdb|2PEL|C Chain C, Peanut Lectin
pdb|2PEL|D Chain D, Peanut Lectin
pdb|2TEP|A Chain A, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|B Chain B, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|C Chain C, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|D Chain D, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|1CIW|A Chain A, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|B Chain B, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|C Chain C, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|D Chain D, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1QF3|A Chain A, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|B Chain B, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|C Chain C, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|D Chain D, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1CR7|A Chain A, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|B Chain B, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|C Chain C, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|D Chain D, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|E Chain E, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|F Chain F, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|G Chain G, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|H Chain H, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CQ9|A Chain A, Peanut Lectin-Triclinic Form
pdb|1CQ9|B Chain B, Peanut Lectin-Triclinic Form
pdb|1CQ9|C Chain C, Peanut Lectin-Triclinic Form
pdb|1CQ9|D Chain D, Peanut Lectin-Triclinic Form
pdb|1RIR|A Chain A, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|B Chain B, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|C Chain C, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|D Chain D, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIT|A Chain A, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|B Chain B, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|C Chain C, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|D Chain D, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|2DH1|A Chain A, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|B Chain B, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|C Chain C, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|D Chain D, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DV9|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DVA|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVB|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVD|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVF|A Chain A, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|B Chain B, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|C Chain C, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|D Chain D, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVG|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
Length = 236
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 23/239 (9%)
Query: 48 FSNFT-SNYEIKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATP 106
F++F+ N I G+ ++ + G IQ+ + ++ GR +Y+ P+R+ T
Sbjct: 8 FNSFSEGNPAINFQGDVTVLSN-GNIQLTN----LNKVNSVGRVLYAMPVRIWSSATGNV 62
Query: 107 AXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTV--GRAGPWLGIVNDACEHYKVFA 164
A + F I P++ + G G V+D
Sbjct: 63 ASFLTSFSFEMKDIKDYDPADG---IIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVG 119
Query: 165 VEFDNSNDPNFGDPNDDHVGINLGTAVSFKTAD-SSESNASLHHDDVVHRAWIRYDGHRN 223
VEFD ++ + DP DHVGI++ + S KT +S S A V + + YD
Sbjct: 120 VEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGA-------VVKVTVIYDSSTK 172
Query: 224 WIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTG-DSSQIHSILSWEFFST 281
+ + + D + + E + GFSAS QIH I SW F ST
Sbjct: 173 TLSVAVTNDNGDITT---IAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTST 228
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 383 MEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPN 442
+E++ G +Y+G+L VAVK FS F + + + R+ + H N
Sbjct: 18 LELIGRGRYGAVYKGSLDERP-VAVKVFS---FANRQNFINEKNIYRVPLME-----HDN 68
Query: 443 LAPIRGWCCDNR-------ETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLS 495
+A R D R E ++V +YY NGSL ++L + W L V L+
Sbjct: 69 IA--RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-SLHTSDWVSSCRLAHSVTRGLA 125
Query: 496 FLHSK---------ELTHGNLKSSSVFLDVNCKAVLGDYGFFM 529
+LH++ ++H +L S +V + + V+ D+G M
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 369 EILELYRA-------TKRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKRFSSNEFLHLSR 420
EILE R+ K++++ E + G +Y + G VA+++ + + +
Sbjct: 4 EILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-----Q 58
Query: 421 LDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPW 480
++ I + N +PN+ E +V +Y GSL + +
Sbjct: 59 PKKELIINEILVMRENK--NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDE 115
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF------------- 527
+ + ++ ++L FLHS ++ H ++KS ++ L ++ L D+GF
Sbjct: 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175
Query: 528 FMGS-------VSSKKA-----DVFGFGMLVLEIVSGKRTELEE 559
+G+ V ++KA D++ G++ +E++ G+ L E
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 219
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 369 EILELYRA-------TKRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKRFSSNEFLHLSR 420
EILE R+ K++++ E + G +Y + G VA+++ + + +
Sbjct: 4 EILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-----Q 58
Query: 421 LDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPW 480
++ I + N +PN+ E +V +Y GSL + +
Sbjct: 59 PKKELIINEILVMRENK--NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDE 115
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF------------- 527
+ + ++ ++L FLHS ++ H ++KS ++ L ++ L D+GF
Sbjct: 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSE 175
Query: 528 FMGS-------VSSKKA-----DVFGFGMLVLEIVSGKRTELEE 559
+G+ V ++KA D++ G++ +E++ G+ L E
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 219
>pdb|2CWM|A Chain A, Native Crystal Structure Of No Releasing Inductive Lectin
From Seeds Of The Canavalia Maritima (Conm)
pdb|2CWM|D Chain D, Native Crystal Structure Of No Releasing Inductive Lectin
From Seeds Of The Canavalia Maritima (Conm)
pdb|2CY6|A Chain A, Crystal Structure Of Conm In Complex With Trehalose And
Maltose
pdb|2CY6|D Chain D, Crystal Structure Of Conm In Complex With Trehalose And
Maltose
pdb|2CYF|A Chain A, The Crystal Structure Of Canavalia Maritima Lectin (Conm)
In Complex With Trehalose And Maltose
pdb|2CYF|C Chain C, The Crystal Structure Of Canavalia Maritima Lectin (Conm)
In Complex With Trehalose And Maltose
pdb|2P37|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|B Chain B, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|C Chain C, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|D Chain D, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P34|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|B Chain B, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|C Chain C, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|D Chain D, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|3SNM|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds Complexed With Indole-3-Acetic Acid
pdb|4I30|A Chain A, Crystal Structure Of Canavalia Maritima Seeds Lectin
(Conm) Co- Crystalized With Gamma-Aminobutyric Acid
(Gaba) And Soaked With Adenine
Length = 237
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D + + GDP+ H+GI++ + S KTA + N + +++ + G
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSV----GK 59
Query: 222 R-NWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFS 280
R + + Y D TV E++ VG SASTG + ++ILSW F S
Sbjct: 60 RLSAVVSYPNGDSATV------SYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV +Y +NGSLD +L F V L +++ +A
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV +Y +NGSLD +L F V L +++ +A
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV +Y +NGSLD +L F V L +++ +A
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 147
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 181
>pdb|2OW4|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Conm) In Complex With Man1-2man-Ome
Length = 237
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D + + GDP+ H+GI++ + S KTA + N + +++ + G
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSV----GK 59
Query: 222 R-NWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFS 280
R + + Y D TV E++ VG SASTG + ++ILSW F S
Sbjct: 60 RLSAVVSYPNGDSATV------SYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTS 113
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV +Y +NGSLD +L F V L +++ +A
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 130
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 164
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 369 EILELYRA-------TKRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKRFSSNEFLHLSR 420
EILE R+ K++++ E + G +Y + G VA+++ + + +
Sbjct: 5 EILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-----Q 59
Query: 421 LDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPW 480
++ I + N +PN+ E +V +Y GSL + +
Sbjct: 60 PKKELIINEILVMRENK--NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDE 116
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF------------- 527
+ + ++ ++L FLHS ++ H ++KS ++ L ++ L D+GF
Sbjct: 117 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX 176
Query: 528 FMGS-------VSSKKA-----DVFGFGMLVLEIVSGKRTELEE 559
+G+ V ++KA D++ G++ +E++ G+ L E
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 220
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV +Y +NGSLD +L F V L +++ +A
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV +Y +NGSLD +L F V L +++ +A
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 78/203 (38%), Gaps = 35/203 (17%)
Query: 383 MEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPN 442
++ + S G+++ G N VA+K ++ V+ ++S HP
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS--------HPK 64
Query: 443 LAPIRGWCCDNRETIIVYDYYQNGSLDRWL-FGVGVLPWSRRFELIKDVAESLSFLHSKE 501
L + G C + +V ++ ++G L +L G+ + DV E +++L
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF--------------------------FMGSVSSK 535
+ H +L + + + N + D+G F S S
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 536 KADVFGFGMLVLEIVSGKRTELE 558
K+DV+ FG+L+ E+ S + E
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYE 207
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 369 EILELYRA-------TKRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKRFSSNEFLHLSR 420
EILE R+ K++++ E + G +Y + G VA+++ + + +
Sbjct: 4 EILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-----Q 58
Query: 421 LDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPW 480
++ I + N +PN+ E +V +Y GSL + +
Sbjct: 59 PKKELIINEILVMRENK--NPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDE 115
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF------------- 527
+ + ++ ++L FLHS ++ H ++KS ++ L ++ L D+GF
Sbjct: 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX 175
Query: 528 FMGS-------VSSKKA-----DVFGFGMLVLEIVSGKRTELEE 559
+G+ V ++KA D++ G++ +E++ G+ L E
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 219
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV +Y +NGSLD +L F V L +++ +A
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 157
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 191
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV +Y +NGSLD +L F V L +++ +A
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV +Y +NGSLD +L F V L +++ +A
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 362 PSKPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
P KP + E+ R T + +E L + G ++ G VAVK + L
Sbjct: 9 PQKPWWEDEWEVPRETLKL--VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 66
Query: 422 DWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGV 477
++K++ H L +R + +E I I+ +Y +NGSL +L G+
Sbjct: 67 AEANLMKQLQ--------HQRL--VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK- 115
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FM 529
L ++ ++ +AE ++F+ + H +L+++++ + + D+G +
Sbjct: 116 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 175
Query: 530 GSVSSK------------------KADVFGFGMLVLEIVSGKR 554
+K K+DV+ FG+L+ EIV+ R
Sbjct: 176 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|B Chain B, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|C Chain C, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|D Chain D, Peanut Lectin Complexed With C-Lactose
pdb|1V6I|A Chain A, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|B Chain B, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|C Chain C, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|D Chain D, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6J|A Chain A, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|B Chain B, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|C Chain C, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|D Chain D, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6K|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6L|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6M|A Chain A, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|B Chain B, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|C Chain C, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|D Chain D, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|E Chain E, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|F Chain F, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|G Chain G, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|H Chain H, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6N|A Chain A, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|B Chain B, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|C Chain C, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|D Chain D, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|E Chain E, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|F Chain F, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|G Chain G, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|H Chain H, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6O|A Chain A, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|B Chain B, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|C Chain C, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|D Chain D, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|E Chain E, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|F Chain F, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|G Chain G, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|H Chain H, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
Length = 232
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 23/239 (9%)
Query: 48 FSNFT-SNYEIKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAIYSSPIRLLDPLTATP 106
F++F+ N I G+ ++ + G IQ+ + ++ GR +Y+ P+R+ T
Sbjct: 8 FNSFSEGNPAINFQGDVTVLSN-GNIQLTN----LNKVNSVGRVLYAMPVRIWSSATGNV 62
Query: 107 AXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTV--GRAGPWLGIVNDACEHYKVFA 164
A + F I P++ + G G V+D
Sbjct: 63 ASFLTSFSFEMKDIKDYDPADG---IIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVG 119
Query: 165 VEFDNSNDPNFGDPNDDHVGINLGTAVSFKTAD-SSESNASLHHDDVVHRAWIRYDGHRN 223
VEFD ++ + DP DHVGI++ + S KT +S S A V + + YD
Sbjct: 120 VEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVPWNSVSGA-------VVKVTVIYDSSTK 172
Query: 224 WIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTG-DSSQIHSILSWEFFST 281
+ + + D + + E + GFSAS QIH I SW F ST
Sbjct: 173 TLSVAVTNDNGDITT---IAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTST 228
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL-FGVGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G ++ +IV +Y +NGSLD +L G + +++ ++ + +L
Sbjct: 82 HPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS 141
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
H +L + ++ ++ N + D+G
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGL 170
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 39/88 (44%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + +V +Y G + +L G + + + ++ + H
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGF 527
K + H +LK+ ++ LD + + D+GF
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|2JE9|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|B Chain B, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|C Chain C, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|D Chain D, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
Length = 239
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D+ + + GDPN H+GI++ S ++ ++ N VH ++
Sbjct: 6 IVAVELDSYPNTDIGDPNYPHIGIDIK---SIRSKSTARWNMQTGKVGTVHISYNSVAKR 62
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFS 280
+ + Y G TV E++ VG SA+TG + ++ILSW F S
Sbjct: 63 LSAVVSYSGSSSTTV------SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 115
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 42/101 (41%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + +V +Y G + +L G + + + ++ + H
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVF 540
K + H +LK+ ++ LD + + D+GF K D F
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 165
>pdb|2JEC|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|B Chain B, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|C Chain C, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|D Chain D, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
Length = 239
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D+ + + GDPN H+GI++ S ++ ++ N VH ++
Sbjct: 6 IVAVELDSYPNTDIGDPNYPHIGIDIK---SIRSKSTARWNMQTGKVGTVHISYNSVAKR 62
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFS 280
+ + Y G TV E++ VG SA+TG + ++ILSW F S
Sbjct: 63 LSAVVSYSGSSSTTV------SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 115
>pdb|2GDF|A Chain A, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|B Chain B, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|C Chain C, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|D Chain D, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|3AX4|A Chain A, Three-Dimensional Structure Of Lectin From Dioclea
Violacea And Comparative Vasorelaxant Effects With
Dioclea Rostrata
Length = 237
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D+ + + GDPN H+GI++ S ++ ++ N VH ++
Sbjct: 4 IVAVELDSYPNTDIGDPNYPHIGIDIK---SIRSKSTARWNMQTGKVGTVHISYNSVAKR 60
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFS 280
+ + Y G TV E++ VG SA+TG + ++ILSW F S
Sbjct: 61 LSAVVSYSGSSSTTV------SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 25/89 (28%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------------FMG------ 530
V ++L++LH++ + H ++KS S+ L ++ + L D+GF +G
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMA 209
Query: 531 ------SVSSKKADVFGFGMLVLEIVSGK 553
S+ + + D++ G++V+E+V G+
Sbjct: 210 PEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|3SH3|A Chain A, Crystal Structure Of A Pro-Inflammatory Lectin From The
Seeds Of Dioclea Wilsonii Standl
Length = 237
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE D+ + + GDPN H+GI++ S ++ ++ N VH ++
Sbjct: 4 IVAVELDSYPNTDIGDPNYPHIGIDIK---SIRSKSTARWNMQTGKVGTVHISYNSVAKR 60
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFS 280
+ + Y G TV E++ VG SA+TG + ++ILSW F S
Sbjct: 61 LSAVVSYSGSSSTTV------SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 362 PSKPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
P KP + E+ R T + +E L + G ++ G VAVK + L
Sbjct: 5 PQKPWWEDEWEVPRETLKL--VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 62
Query: 422 DWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGV 477
++K++ H L +R + +E I I+ +Y +NGSL +L G+
Sbjct: 63 AEANLMKQLQ--------HQRL--VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK- 111
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FM 529
L ++ ++ +AE ++F+ + H +L+++++ + + D+G +
Sbjct: 112 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 171
Query: 530 GSVSSK------------------KADVFGFGMLVLEIVSGKR 554
+K K+DV+ FG+L+ EIV+ R
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 362 PSKPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
P KP + E+ R T + +E L + G ++ G VAVK + L
Sbjct: 4 PQKPWWEDEWEVPRETLKL--VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 61
Query: 422 DWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGV 477
++K++ H L +R + +E I I+ +Y +NGSL +L G+
Sbjct: 62 AEANLMKQLQ--------HQRL--VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK- 110
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FM 529
L ++ ++ +AE ++F+ + H +L+++++ + + D+G +
Sbjct: 111 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 170
Query: 530 GSVSSK------------------KADVFGFGMLVLEIVSGKR 554
+K K+DV+ FG+L+ EIV+ R
Sbjct: 171 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 40/152 (26%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIK----------- 488
HPN+ + G C + +Y +G+L +L VL F +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 489 -----DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMG------------- 530
DVA + +L K+ H NL + ++ + N A + D+G G
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 201
Query: 531 -----------SVSSKKADVFGFGMLVLEIVS 551
SV + +DV+ +G+L+ EIVS
Sbjct: 202 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSL-DRWLFGVGVL-PWSRRFELIKDVAESLSFL 497
HPN+ R +N IV DY + G L R GVL + + + +L +
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 498 HSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
H +++ H ++KS ++FL + LGD+G
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGI 171
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 380 FSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVP 438
F + VL + G V+ G AVK + L ++ T KRI S+ N
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN-- 82
Query: 439 CHPNLAPIRGWCC--DNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIK------DV 490
HP L + +CC V ++ G L +F + SRRF+ + ++
Sbjct: 83 -HPFLTQL--FCCFQTPDRLFFVMEFVNGGDL---MFHIQK---SRRFDEARARFYAAEI 133
Query: 491 AESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYG 526
+L FLH K + + +LK +V LD L D+G
Sbjct: 134 ISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFG 169
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 446 IRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGVLPWSRRFELIKDVAESLSFLHSKE 501
+R + +E I I+ +Y +NGSL +L G+ L ++ ++ +AE ++F+ +
Sbjct: 67 VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 125
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------------ 535
H NL+++++ + + D+G + +K
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 185
Query: 536 KADVFGFGMLVLEIVSGKR 554
K+DV+ FG+L+ EIV+ R
Sbjct: 186 KSDVWSFGILLTEIVTHGR 204
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 458 IVYDYYQNGSLDRWLFGVGVLPWSR--RFELIKDVAESLSFLHSKELTHGNLKSSSVFLD 515
I ++ G+L++W+ + EL + + + + ++HSK+L H +LK S++FL
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL- 169
Query: 516 VNCKAV-LGDYGF 527
V+ K V +GD+G
Sbjct: 170 VDTKQVKIGDFGL 182
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL-FGVGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G ++ +I+ ++ +NG+LD +L G + +++ +A + +L
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA 135
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGF--FMGSVSSKKADVFGFG 543
H +L + ++ ++ N + D+G F+ SS + G
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG 182
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 83/213 (38%), Gaps = 33/213 (15%)
Query: 362 PSKPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
P KP + E+ R + + K L + G ++ T VAVK + L
Sbjct: 168 PQKPWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFL 225
Query: 422 DWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGV--GVLP 479
V+K + H L + I+ ++ GSL +L P
Sbjct: 226 AEANVMKTLQ--------HDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 276
Query: 480 WSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSK---- 535
+ + +AE ++F+ + H +L+++++ + + + D+G + V +K
Sbjct: 277 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG--LARVGAKFPIK 334
Query: 536 --------------KADVFGFGMLVLEIVSGKR 554
K+DV+ FG+L++EIV+ R
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 440 HPNLAPIRGWCCDNRET--IIVYDYYQNGSLDRWL--FGVGVLPWSRRFELIKDVAESLS 495
H ++ +G C D E +V +Y GSL +L +G+ ++ + + E ++
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL---AQLLLFAQQICEGMA 131
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS+ H NL + +V LD + +GD+G
Sbjct: 132 YLHSQHYIHRNLAARNVLLDNDRLVKIGDFGL 163
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 30/100 (30%)
Query: 484 FELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF---------------F 528
++ + A + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 111 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQL 170
Query: 529 MGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 171 SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSS 534
L ++HS ++ H +LK S++ ++ NC+ +GD+G G +S
Sbjct: 172 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 212
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 30/100 (30%)
Query: 484 FELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF---------------F 528
++ + A + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 529 MGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 183 SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 41/101 (40%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + +V +Y G + +L G + + ++ + H
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVF 540
K + H +LK+ ++ LD + + D+GF K D F
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAF 172
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 30/100 (30%)
Query: 484 FELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF---------------F 528
++ + A + +LH+K + H +LKS+++FL + +GD+G
Sbjct: 123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 529 MGSV---------------SSKKADVFGFGMLVLEIVSGK 553
GS+ S ++DV+ FG+++ E+++G+
Sbjct: 183 SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSS 534
L ++HS ++ H +LK S++ ++ NC+ +GD+G G +S
Sbjct: 171 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211
>pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With
Methyl-Alpha-D- Mannose
Length = 236
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTA-----DSSESNASLHHDDVVHR--A 214
+ AVE D + + GDP+ H+GIN+ + S T + A + ++ V R A
Sbjct: 4 IVAVELDTYPNTDIGDPSYQHIGINIKSIRSKATTRWDVQNGKVGTAHISYNSVAKRLSA 63
Query: 215 WIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSIL 274
+ Y G + Y VD + + E++ VG SASTG + ++IL
Sbjct: 64 VVSYPGGSSATVSY-DVDLNNI---------------LPEWVRVGLSASTGLYKETNTIL 107
Query: 275 SWEFFS 280
SW F S
Sbjct: 108 SWSFTS 113
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 28/122 (22%)
Query: 458 IVYDYYQNGS-LDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDV 516
I+ +Y GS LD L G L ++ +++++ + L +LHS++ H ++K+++V L
Sbjct: 97 IIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 154
Query: 517 NCKAVLGDYG-------------------FFMG------SVSSKKADVFGFGMLVLEIVS 551
+ + L D+G F+M S KAD++ G+ +E+
Sbjct: 155 HGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 214
Query: 552 GK 553
G+
Sbjct: 215 GE 216
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 451 CDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSS 510
C+NR +YD + +L++ + L + + E+LS++HS+ + H +LK
Sbjct: 97 CENR---TLYDLIHSENLNQ--------QRDEYWRLFRQILEALSYIHSQGIIHRDLKPM 145
Query: 511 SVFLDVNCKAVLGDYGF 527
++F+D + +GD+G
Sbjct: 146 NIFIDESRNVKIGDFGL 162
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 28/122 (22%)
Query: 458 IVYDYYQNGS-LDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDV 516
I+ +Y GS LD L G L ++ +++++ + L +LHS++ H ++K+++V L
Sbjct: 82 IIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 139
Query: 517 NCKAVLGDYG-------------------FFMG------SVSSKKADVFGFGMLVLEIVS 551
+ + L D+G F+M S KAD++ G+ +E+
Sbjct: 140 HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 199
Query: 552 GK 553
G+
Sbjct: 200 GE 201
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 458 IVYDYYQNGSLDRWLFGVGVLPWSRRF-ELIKDVAESLSFLHSKELTHGNLKSSSVFLDV 516
I +Y +NG+L + + + L + + E+LS++HS+ + H +LK ++F+D
Sbjct: 92 IQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE 151
Query: 517 NCKAVLGDYGF 527
+ +GD+G
Sbjct: 152 SRNVKIGDFGL 162
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 28/122 (22%)
Query: 458 IVYDYYQNGS-LDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDV 516
I+ +Y GS LD L G L ++ +++++ + L +LHS++ H ++K+++V L
Sbjct: 82 IIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 139
Query: 517 NCKAVLGDYG-------------------FFMG------SVSSKKADVFGFGMLVLEIVS 551
+ + L D+G F+M S KAD++ G+ +E+
Sbjct: 140 HGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 199
Query: 552 GK 553
G+
Sbjct: 200 GE 201
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLF-GVGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G + +I+ ++ +NGSLD +L G + +++ +A + +L
Sbjct: 93 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
H +L + ++ ++ N + D+G
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGL 181
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL-FGVGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G ++ +I+ ++ +NG+LD +L G + +++ +A + +L
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA 133
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
H +L + ++ ++ N + D+G
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGL 162
>pdb|3RRD|A Chain A, Native Structure Of Dioclea Virgata Lectin
pdb|3RS6|A Chain A, Crystal Structure Dioclea Virgata Lectin In Complexed With
X-Mannose
Length = 237
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTA-----DSSESNASLHHDDVVHR--A 214
+ AVE D+ + + GDP+ H+GI++ + S TA A + ++ V R A
Sbjct: 4 IVAVELDSYPNTDIGDPSYPHIGIDIKSVRSKSTARWNMQTGKVGTAHISYNSVAKRLSA 63
Query: 215 WIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSIL 274
+ Y G + + VD + V E++ VG SA+TG + ++IL
Sbjct: 64 VVSYTGSSS-TTVSYDVDLNNV---------------LPEWVRVGLSATTGLYKETNTIL 107
Query: 275 SWEFFS 280
SW F S
Sbjct: 108 SWSFTS 113
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 43/223 (19%)
Query: 362 PSKPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
P KP + E+ R T + +E L + G ++ G VAVK + L
Sbjct: 7 PQKPWWEDEWEVPRETLKL--VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 64
Query: 422 DWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGV 477
++K++ H L +R + +E I I+ +Y +NGSL +L G+
Sbjct: 65 AEANLMKQLQ--------HQRL--VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK- 113
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FM 529
L ++ ++ +AE ++F+ + H +L+++++ + + D+G
Sbjct: 114 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 173
Query: 530 GSVSSK------------------KADVFGFGMLVLEIVSGKR 554
+K K+DV+ FG+L+ EIV+ R
Sbjct: 174 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 440 HPNLAPIRGWCCDNRET--IIVYDYYQNGSLDRWL--FGVGVLPWSRRFELIKDVAESLS 495
H ++ +G C D E +V +Y GSL +L +G+ ++ + + E ++
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL---AQLLLFAQQICEGMA 131
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LH++ H NL + +V LD + +GD+G
Sbjct: 132 YLHAQHYIHRNLAARNVLLDNDRLVKIGDFGL 163
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 43/223 (19%)
Query: 362 PSKPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
P KP + E+ R T + +E L + G ++ G VAVK + L
Sbjct: 8 PQKPWWEDEWEVPRETLKL--VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 65
Query: 422 DWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGV 477
++K++ H L +R + +E I I+ +Y +NGSL +L G+
Sbjct: 66 AEANLMKQLQ--------HQRL--VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK- 114
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FM 529
L ++ ++ +AE ++F+ + H +L+++++ + + D+G
Sbjct: 115 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 174
Query: 530 GSVSSK------------------KADVFGFGMLVLEIVSGKR 554
+K K+DV+ FG+L+ EIV+ R
Sbjct: 175 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|2JDZ|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin
Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
Length = 239
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTA-----DSSESNASLHHDDVVHR--A 214
+ AVE D+ + + GDP+ H+GI++ + S TA A + ++ V R A
Sbjct: 6 IVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLSA 65
Query: 215 WIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSIL 274
+ Y G + Y VD + V E++ VG SA+TG + ++IL
Sbjct: 66 VVSYSGTSSTTVSY-DVDLNNV---------------LPEWVRVGLSATTGLYKETNTIL 109
Query: 275 SWEFFS 280
SW F S
Sbjct: 110 SWSFTS 115
>pdb|2JE7|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin
S131h Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
Length = 239
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTA-----DSSESNASLHHDDVVHR--A 214
+ AVE D+ + + GDP+ H+GI++ + S TA A + ++ V R A
Sbjct: 6 IVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLSA 65
Query: 215 WIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSIL 274
+ Y G + Y VD + V E++ VG SA+TG + ++IL
Sbjct: 66 VVSYSGTSSTTVSY-DVDLNNV---------------LPEWVRVGLSATTGLYKETNTIL 109
Query: 275 SWEFFS 280
SW F S
Sbjct: 110 SWSFTS 115
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 43/223 (19%)
Query: 362 PSKPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
P KP + E+ R T + +E L + G ++ G VAVK + L
Sbjct: 5 PQKPWWEDEWEVPRETLKL--VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 62
Query: 422 DWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGV 477
++K++ H L +R + +E I I+ +Y +NGSL +L G+
Sbjct: 63 AEANLMKQLQ--------HQRL--VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK- 111
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FM 529
L ++ ++ +AE ++F+ + H +L+++++ + + D+G
Sbjct: 112 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 171
Query: 530 GSVSSK------------------KADVFGFGMLVLEIVSGKR 554
+K K+DV+ FG+L+ EIV+ R
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLF-GVGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G + +I+ +Y +NGSLD +L G + +++ + + +L
Sbjct: 89 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 148
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
H +L + ++ ++ N + D+G
Sbjct: 149 DMSAVHRDLAARNILVNSNLVCKVSDFGM 177
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLF-GVGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G + +I+ +Y +NGSLD +L G + +++ + + +L
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
H +L + ++ ++ N + D+G
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGM 156
>pdb|1DGL|A Chain A, Lectin From Dioclea Grandiflora Complexed To Trimannoside
pdb|1DGL|B Chain B, Lectin From Dioclea Grandiflora Complexed To Trimannoside
Length = 237
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNASLHHDDVVHRAWIRYDGH 221
+ AVE ++ + + GDPN H+GI++ S ++ ++ N VH ++
Sbjct: 4 IVAVELNSYPNTDIGDPNYPHIGIDIK---SIRSKSTARWNMQTGKVGTVHISYNSVAKR 60
Query: 222 RNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSILSWEFFS 280
+ + Y G TV E++ VG SA+TG + ++ILSW F S
Sbjct: 61 LSAVVSYSGSSSTTV------SYDVDLNNVLPEWVRVGLSATTGLYKETNTILSWSFTS 113
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLF-GVGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G + +I+ +Y +NGSLD +L G + +++ + + +L
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
H +L + ++ ++ N + D+G
Sbjct: 134 DMSYVHRDLAARNILVNSNLVCKVSDFGM 162
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 43/223 (19%)
Query: 362 PSKPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
P KP + E+ R T + +E L + G ++ G VAVK + L
Sbjct: 1 PQKPWWEDEWEVPRETLKL--VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 58
Query: 422 DWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGV 477
++K++ H L +R + +E I I+ +Y +NGSL +L G+
Sbjct: 59 AEANLMKQLQ--------HQRL--VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK- 107
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FM 529
L ++ ++ +AE ++F+ + H +L+++++ + + D+G
Sbjct: 108 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 167
Query: 530 GSVSSK------------------KADVFGFGMLVLEIVSGKR 554
+K K+DV+ FG+L+ EIV+ R
Sbjct: 168 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 28/122 (22%)
Query: 458 IVYDYYQNGS-LDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDV 516
I+ +Y GS LD L G L ++ +++++ + L +LHS++ H ++K+++V L
Sbjct: 102 IIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 159
Query: 517 NCKAVLGDYG-------------------FFMG------SVSSKKADVFGFGMLVLEIVS 551
+ + L D+G F+M S KAD++ G+ +E+
Sbjct: 160 HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 219
Query: 552 GK 553
G+
Sbjct: 220 GE 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFG----VGVLPWSRRFELIKDVAESLS 495
H +L G C E I+V ++ + GSLD +L + +L W + E+ K +A ++
Sbjct: 71 HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAAAMH 127
Query: 496 FLHSKELTHGNLKSSSVFL 514
FL L HGN+ + ++ L
Sbjct: 128 FLEENTLIHGNVCAKNILL 146
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 27/188 (14%)
Query: 376 ATKRFSKMEVLASDTRGVLYRGTLP-NGCYVAVKRF------SSNEFLHLSRLDWTRVLK 428
AT R+ + + G +Y+ P +G +VA+K L +S + +L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 429 RISSITTNVPCHPNLAPIRGWCCDNR--ETIIVYDYYQNGSLDRWLFGVGVLPWSRRFEL 486
R+ + HPN+ + C +R I V +++ D + P E
Sbjct: 67 RLEAFE-----HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAET 121
Query: 487 IKDVAES----LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
IKD+ L FLH+ + H +LK ++ + L D+G A ++ +
Sbjct: 122 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL---------ARIYSY 172
Query: 543 GMLVLEIV 550
M + +V
Sbjct: 173 QMALTPVV 180
>pdb|1H9W|A Chain A, Native Dioclea Guianensis Seed Lectin
pdb|1H9W|B Chain B, Native Dioclea Guianensis Seed Lectin
Length = 237
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTA-----DSSESNASLHHDDVVHR--A 214
+ AVE D+ + + GDP+ H+GI++ + S TA A + ++ V R A
Sbjct: 4 IVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLSA 63
Query: 215 WIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSIL 274
+ Y G + + VD + V E++ VG SA+TG + ++IL
Sbjct: 64 VVSYTGSSS-TTVSYDVDLNNV---------------LPEWVRVGLSATTGLYKETNTIL 107
Query: 275 SWEFFS 280
SW F S
Sbjct: 108 SWSFTS 113
>pdb|1H9P|A Chain A, Crystal Structure Of Dioclea Guianensis Seed Lectin
Length = 237
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTA-----DSSESNASLHHDDVVHR--A 214
+ AVE D+ + + GDP+ H+GI++ + S TA A + ++ V R A
Sbjct: 4 IVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLSA 63
Query: 215 WIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSIL 274
+ Y G + + VD + V E++ VG SA+TG + ++IL
Sbjct: 64 VVSYTGSSS-TTVSYDVDLNNV---------------LPEWVRVGLSATTGLYKETNTIL 107
Query: 275 SWEFFS 280
SW F S
Sbjct: 108 SWSFTS 113
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 40/152 (26%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIK----------- 488
HPN+ + G C + +Y +G+L +L VL F +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 489 -----DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMG------------- 530
DVA + +L K+ H +L + ++ + N A + D+G G
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 194
Query: 531 -----------SVSSKKADVFGFGMLVLEIVS 551
SV + +DV+ +G+L+ EIVS
Sbjct: 195 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 25/140 (17%)
Query: 440 HPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWLFGVG--VLPWSRRFELIKDVAESLSF 496
H NL + G + + + IV +Y GSL +L G VL + DV E++ +
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSK--------------------- 535
L H +L + +V + + A + D+G + S++
Sbjct: 305 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFS 364
Query: 536 -KADVFGFGMLVLEIVSGKR 554
K+DV+ FG+L+ EI S R
Sbjct: 365 TKSDVWSFGILLWEIYSFGR 384
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 40/152 (26%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIK----------- 488
HPN+ + G C + +Y +G+L +L VL F +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 489 -----DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMG------------- 530
DVA + +L K+ H +L + ++ + N A + D+G G
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 531 -----------SVSSKKADVFGFGMLVLEIVS 551
SV + +DV+ +G+L+ EIVS
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3A0K|A Chain A, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
pdb|3A0K|C Chain C, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
pdb|3A0K|E Chain E, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
pdb|3A0K|G Chain G, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
Length = 237
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 162 VFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTA-----DSSESNASLHHDDVVHR--A 214
+ AVE D+ + + GDP+ H+GI++ + S TA A + ++ V R A
Sbjct: 4 IVAVELDSYPNTDIGDPSYPHIGIDIKSIRSKSTARWNMQTGKVGTAHISYNSVAKRLTA 63
Query: 215 WIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXEYMFVGFSASTGDSSQIHSIL 274
+ Y G + + VD V E++ VG SA+TG + ++IL
Sbjct: 64 VVSYSGSSS-TTVSYDVDLTNV---------------LPEWVRVGLSATTGLYKETNTIL 107
Query: 275 SWEFFS 280
SW F S
Sbjct: 108 SWSFTS 113
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Query: 442 NLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKE 501
NLA + WC E +Y + +F + ++ + A+ + +LH+K
Sbjct: 105 NLAIVTQWC----EGSSLYKHLHVQETKFQMFQL--------IDIARQTAQGMDYLHAKN 152
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ H ++KS+++FL +GD+G
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGL 178
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 26/150 (17%)
Query: 431 SSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWLFGVG--VLPWSRRFELI 487
+S+ T + H NL + G + + + IV +Y GSL +L G VL +
Sbjct: 65 ASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 123
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSK------------ 535
DV E++ +L H +L + +V + + A + D+G + S++
Sbjct: 124 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 183
Query: 536 ----------KADVFGFGMLVLEIVSGKRT 555
K+DV+ FG+L+ EI S R
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYSFGRV 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 26/150 (17%)
Query: 431 SSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWLFGVG--VLPWSRRFELI 487
+S+ T + H NL + G + + + IV +Y GSL +L G VL +
Sbjct: 50 ASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 108
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSK------------ 535
DV E++ +L H +L + +V + + A + D+G + S++
Sbjct: 109 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 168
Query: 536 ----------KADVFGFGMLVLEIVSGKRT 555
K+DV+ FG+L+ EI S R
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGRV 198
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELI-KDVAESLSFLH 498
HP + + G + + I+ ++ G++D + + + +++ + + E+L+FLH
Sbjct: 75 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSS-KKADVF 540
SK + H +LK+ +V + + L D+G ++ + +K D F
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%)
Query: 431 SSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWLFGVG--VLPWSRRFELI 487
+S+ T + H NL + G + + + IV +Y GSL +L G VL +
Sbjct: 56 ASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 114
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVS-------------- 533
DV E++ +L H +L + +V + + A + D+G + S
Sbjct: 115 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 174
Query: 534 --------SKKADVFGFGMLVLEIVSGKRT 555
S K+DV+ FG+L+ EI S R
Sbjct: 175 EALREAAFSTKSDVWSFGILLWEIYSFGRV 204
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELI-KDVAESLSFLH 498
HP + + G + + I+ ++ G++D + + + +++ + + E+L+FLH
Sbjct: 67 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSS-KKADVF 540
SK + H +LK+ +V + + L D+G ++ + +K D F
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 169
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFG-VGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G + +IV ++ +NG+LD +L G + +++ +A + +L
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
H +L + ++ ++ N + D+G
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGL 191
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 29/191 (15%)
Query: 373 LYRATKRFSKMEVLASDTRGVLYRGT-LPNGC-YVAVKRF---SSNEFLHLSRLDWTRVL 427
L RA +++ + + G +++ L NG +VA+KR + E + LS + VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 428 KRISSITTNVPCHPNLAPIRGWCC---DNRET--IIVYDYYQNGSLDRWLFGV---GVLP 479
+ + + HPN+ + C +RET +V+++ + L +L V GV P
Sbjct: 66 RHLETFE-----HPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGV-P 118
Query: 480 WSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADV 539
+++ + L FLHS + H +LK ++ + + + L D+G A +
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL---------ARI 169
Query: 540 FGFGMLVLEIV 550
+ F M + +V
Sbjct: 170 YSFQMALTSVV 180
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 402 GCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWC--CDNRETIIV 459
G VAVK+ + HL D+ R ++ + S+ H N+ +G C R ++
Sbjct: 40 GEVVAVKKLQHSTEEHLR--DFEREIEILKSLQ-----HDNIVKYKGVCYSAGRRNLKLI 92
Query: 460 YDYYQNGSLDRWLFGVGVLPWSRRFELIK------DVAESLSFLHSKELTHGNLKSSSVF 513
+Y GSL +L R + IK + + + +L +K H NL + ++
Sbjct: 93 MEYLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNIL 147
Query: 514 LDVNCKAVLGDYGF 527
++ + +GD+G
Sbjct: 148 VENENRVKIGDFGL 161
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 26/180 (14%)
Query: 373 LYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISS 432
LY + +EV A G +++ L N YVAVK F + + W + S
Sbjct: 19 LYFQSMPLQLLEVKARGRFGCVWKAQLLNE-YVAVKIFPIQD-----KQSWQNEYEVYSL 72
Query: 433 ITTNVPCHPNL-----APIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELI 487
H N+ A RG D + ++ +++ GSL +L V+ W+ +
Sbjct: 73 PGMK---HENILQFIGAEKRGTSVD-VDLWLITAFHEKGSLSDFL-KANVVSWNELCHIA 127
Query: 488 KDVAESLSFLHSK----------ELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKA 537
+ +A L++LH ++H ++KS +V L N A + D+G + + K A
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA 187
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 446 IRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGVLPWSRRFELIKDVAESLSFLHSKE 501
+R + +E I I+ +Y +NGSL +L G+ L ++ ++ +AE ++F+ +
Sbjct: 66 VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 124
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------------ 535
H +L+++++ + + D+G + +K
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 184
Query: 536 KADVFGFGMLVLEIVSGKR 554
K+DV+ FG+L+ EIV+ R
Sbjct: 185 KSDVWSFGILLTEIVTHGR 203
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/153 (18%), Positives = 68/153 (44%), Gaps = 12/153 (7%)
Query: 381 SKMEVLASDTRGVLYRGTLPNG-----CYVAVKRFSSNEFLHLSRLDWTRVLKRISSITT 435
++ +V+ + G +Y+G L VA+K + + R+D+ + +
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFS- 104
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGV-GVLPWSRRFELIKDVAESL 494
H N+ + G + +I+ +Y +NG+LD++L G + +++ +A +
Sbjct: 105 ----HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM 160
Query: 495 SFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+L + H +L + ++ ++ N + D+G
Sbjct: 161 KYLANMNYVHRDLAARNILVNSNLVCKVSDFGL 193
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 401 NGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETII-- 458
G VAVK L R W R ++ + ++ H ++ +G C D E +
Sbjct: 36 TGEMVAVKALKEGCGPQL-RSGWQREIEILRTLY-----HEHIVKYKGCCEDQGEKSVQL 89
Query: 459 VYDYYQNGSLDRWL--FGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDV 516
V +Y GSL +L VG+ ++ + + E +++LH++ H L + +V LD
Sbjct: 90 VMEYVPLGSLRDYLPRHCVGL---AQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDN 146
Query: 517 NCKAVLGDYGF 527
+ +GD+G
Sbjct: 147 DRLVKIGDFGL 157
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 401 NGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETII-- 458
G VAVK L R W R ++ + ++ H ++ +G C D E +
Sbjct: 37 TGEMVAVKALKEGCGPQL-RSGWQREIEILRTLY-----HEHIVKYKGCCEDQGEKSVQL 90
Query: 459 VYDYYQNGSLDRWL--FGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDV 516
V +Y GSL +L VG+ ++ + + E +++LH++ H L + +V LD
Sbjct: 91 VMEYVPLGSLRDYLPRHCVGL---AQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDN 147
Query: 517 NCKAVLGDYGF 527
+ +GD+G
Sbjct: 148 DRLVKIGDFGL 158
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV + +NGSLD +L F V L +++ +A
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV + +NGSLD +L F V L +++ +A
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 130
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 164
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWL------FGVGVLPWSRRFELIKDVAES 493
HPN+ + G ++ +IV + +NGSLD +L F V L +++ +A
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASG 159
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ +L H +L + ++ ++ N + D+G
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 29/191 (15%)
Query: 373 LYRATKRFSKMEVLASDTRGVLYRGT-LPNGC-YVAVKRF---SSNEFLHLSRLDWTRVL 427
L RA +++ + + G +++ L NG +VA+KR + E + LS + VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 428 KRISSITTNVPCHPNLAPIRGWCC---DNRET--IIVYDYYQNGSLDRWLFGV---GVLP 479
+ + + HPN+ + C +RET +V+++ + L +L V GV P
Sbjct: 66 RHLETFE-----HPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGV-P 118
Query: 480 WSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADV 539
+++ + L FLHS + H +LK ++ + + + L D+G A +
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL---------ARI 169
Query: 540 FGFGMLVLEIV 550
+ F M + +V
Sbjct: 170 YSFQMALTSVV 180
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLF-GVGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G + +I+ ++ +NGSLD +L G + +++ +A + +L
Sbjct: 67 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 126
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
H L + ++ ++ N + D+G
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGL 155
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 446 IRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGVLPWSRRFELIKDVAESLSFLHSKE 501
+R + +E I I+ +Y +NGSL +L G+ L ++ ++ +AE ++F+ +
Sbjct: 71 VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------------ 535
H +L+++++ + + D+G + +K
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 536 KADVFGFGMLVLEIVSGKR 554
K+DV+ FG+L+ EIV+ R
Sbjct: 190 KSDVWSFGILLTEIVTHGR 208
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 29/191 (15%)
Query: 373 LYRATKRFSKMEVLASDTRGVLYRGT-LPNGC-YVAVKRF---SSNEFLHLSRLDWTRVL 427
L RA +++ + + G +++ L NG +VA+KR + E + LS + VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 428 KRISSITTNVPCHPNLAPIRGWCC---DNRET--IIVYDYYQNGSLDRWLFGV---GVLP 479
+ + + HPN+ + C +RET +V+++ + L +L V GV P
Sbjct: 66 RHLETFE-----HPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGV-P 118
Query: 480 WSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADV 539
+++ + L FLHS + H +LK ++ + + + L D+G A +
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL---------ARI 169
Query: 540 FGFGMLVLEIV 550
+ F M + +V
Sbjct: 170 YSFQMALTSVV 180
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 24/182 (13%)
Query: 359 PVPPSKPRR-------FEILELYRATKRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKRF 410
PVP +P++ + L +R K+ + + +YR L +G VA+K+
Sbjct: 12 PVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQF------SEVYRAACLLDGVPVALKKV 65
Query: 411 SSNEFLHL-SRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLD 469
+ + +R D + + + + HPN+ ++ E IV + G L
Sbjct: 66 QIFDLMDAKARADCIKEIDLLKQLN-----HPNVIKYYASFIEDNELNIVLELADAGDLS 120
Query: 470 RWLFGVG----VLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDY 525
R + ++P ++ + +L +HS+ + H ++K ++VF+ LGD
Sbjct: 121 RMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDL 180
Query: 526 GF 527
G
Sbjct: 181 GL 182
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 43/221 (19%)
Query: 364 KPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDW 423
KP + E+ R T + +E L + G ++ G VAVK + L
Sbjct: 1 KPWWEDAWEVPRETLKL--VERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 58
Query: 424 TRVLKRISSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGVLP 479
++K++ H L +R + +E I I+ +Y +NGSL +L G+ L
Sbjct: 59 ANLMKQLQ--------HQRL--VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LT 107
Query: 480 WSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGS 531
++ ++ +AE ++F+ + H +L+++++ + + D+G
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAR 167
Query: 532 VSSK------------------KADVFGFGMLVLEIVSGKR 554
+K K+DV+ FG+L+ EIV+ R
Sbjct: 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 34/146 (23%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSL-DRWLFGVGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G + +V ++ G L R L + WS + L+ D+A + ++
Sbjct: 82 HPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 499 SKE--LTHGNLKSSSVFL---DVNCK--AVLGDYGFFMGSVSS----------------- 534
++ + H +L+S ++FL D N A + D+G SV S
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 535 -------KKADVFGFGMLVLEIVSGK 553
+KAD + F M++ I++G+
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGE 225
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF---FMGSVSSKK---------- 536
V ++LS LH++ + H ++KS S+ L + + L D+GF V +K
Sbjct: 256 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 315
Query: 537 ------------ADVFGFGMLVLEIVSGK 553
D++ G++V+E+V G+
Sbjct: 316 PELISRLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 458 IVYDYYQNGSLDRWLFGVGVLPWSR--RFELIKDVAESLSFLHSKELTHGNLKSSSVFLD 515
I ++ G+L++W+ + EL + + + + ++HSK+L + +LK S++FL
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL- 155
Query: 516 VNCKAV-LGDYGF 527
V+ K V +GD+G
Sbjct: 156 VDTKQVKIGDFGL 168
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGF---------------FMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 210
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+SK +D++ G ++ ++V+G
Sbjct: 211 ASKSSDLWALGCIIYQLVAG 230
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 13/126 (10%)
Query: 405 VAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ 464
+ K+ S+ +F L R R+ +++ HPN+ + + +V+D
Sbjct: 62 INTKKLSARDFQKLER--EARICRKLQ--------HPNIVRLHDSIQEESFHYLVFDLVT 111
Query: 465 NGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAV--- 521
G L + + I+ + ES+++ HS + H NLK ++ L K
Sbjct: 112 GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK 171
Query: 522 LGDYGF 527
L D+G
Sbjct: 172 LADFGL 177
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 28/122 (22%)
Query: 458 IVYDYYQNGS-LDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDV 516
I+ +Y GS LD L G + ++K++ + L +LHS++ H ++K+++V L
Sbjct: 98 IIMEYLGGGSALD--LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE 155
Query: 517 NCKAVLGDYG-------------------FFMG------SVSSKKADVFGFGMLVLEIVS 551
L D+G F+M S KAD++ G+ +E+
Sbjct: 156 QGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAK 215
Query: 552 GK 553
G+
Sbjct: 216 GE 217
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 378 KRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKR-FSSNEFLHLSRLDWTRVLKRISSITT 435
+++ ++ L G++++ G VAVK+ F + + + D R + I I T
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ----NSTDAQRTFREIM-ILT 63
Query: 436 NVPCHPNLAPIRGWC-CDN-RETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAES 493
+ H N+ + DN R+ +V+DY + + +L + ++ + +
Sbjct: 64 ELSGHENIVNLLNVLRADNDRDVYLVFDYMETDL--HAVIRANILEPVHKQYVVYQLIKV 121
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKA 537
+ +LHS L H ++K S++ L+ C + D+G V+ ++
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV 165
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 18/151 (11%)
Query: 380 FSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPC 439
FS + T G+ + + N K+ S+ +F L R R+ +++
Sbjct: 18 FSVVRRCVHKTTGLEFAAKIIN-----TKKLSARDFQKLERE--ARICRKLQ-------- 62
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + +V+D G L + + I+ + ES+++ HS
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 500 KELTHGNLKSSSVFLDVNCKAV---LGDYGF 527
+ H NLK ++ L K L D+G
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGL 153
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF---FMGSVSSKK---------- 536
V ++LS LH++ + H ++KS S+ L + + L D+GF V +K
Sbjct: 134 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 193
Query: 537 ------------ADVFGFGMLVLEIVSGK 553
D++ G++V+E+V G+
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 85
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 86 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 141
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 142 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 173
>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOB|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOC|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOE|A Chain A, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOE|C Chain C, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOF|A Chain A, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
pdb|1LOG|A Chain A, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
pdb|1LOG|C Chain C, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
Length = 181
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 12/122 (9%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA+YSSPI + D T A F I P + G
Sbjct: 42 GRALYSSPIHIWDSKTGNVA---NFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGG 98
Query: 148 PWLGIVN--DACEHYKVFAVEFD----NSNDPNFGDPNDDHVGINLGTAVSFKTADSSES 201
+LG+ N D + + AVEFD + DP+ G D H+GI++ + S T +
Sbjct: 99 GYLGVFNSKDYDKTSQTVAVEFDTFYNTAWDPSNG---DRHIGIDVNSIKSINTKSWALQ 155
Query: 202 NA 203
N
Sbjct: 156 NG 157
>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
Length = 181
Score = 35.0 bits (79), Expect = 0.11, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 12/114 (10%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA+YSSPI + D T A F I P + G
Sbjct: 42 GRALYSSPIHIWDSKTGNVA---NFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGG 98
Query: 148 PWLGIVN--DACEHYKVFAVEFD----NSNDPNFGDPNDDHVGINLGTAVSFKT 195
+LG+ N D + + AVEFD + DP+ G D H+GI++ + S T
Sbjct: 99 GYLGVFNSKDYDKTSQTVAVEFDTFYNTAWDPSNG---DRHIGIDVNSIKSINT 149
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 18/151 (11%)
Query: 380 FSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPC 439
FS + T G+ + + N K+ S+ +F L R R+ +++
Sbjct: 19 FSVVRRCVHKTTGLEFAAKIIN-----TKKLSARDFQKLERE--ARICRKLQ-------- 63
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + +V+D G L + + I+ + ES+++ HS
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 500 KELTHGNLKSSSVFLDVNCKAV---LGDYGF 527
+ H NLK ++ L K L D+G
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGL 154
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 12/140 (8%)
Query: 392 GVLYRGTL-PNGCYVAVK--RFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRG 448
G ++ G L + VAVK R + L L R+LK+ S HPN+ + G
Sbjct: 128 GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS--------HPNIVRLIG 179
Query: 449 WCCDNRETIIVYDYYQNGSLDRWLFGVGV-LPWSRRFELIKDVAESLSFLHSKELTHGNL 507
C + IV + Q G +L G L +++ D A + +L SK H +L
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 508 KSSSVFLDVNCKAVLGDYGF 527
+ + + + D+G
Sbjct: 240 AARNCLVTEKNVLKISDFGM 259
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ + + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGF 187
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF---FMGSVSSKK---------- 536
V ++LS LH++ + H ++KS S+ L + + L D+GF V +K
Sbjct: 179 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 238
Query: 537 ------------ADVFGFGMLVLEIVSGK 553
D++ G++V+E+V G+
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF---FMGSVSSKK---------- 536
V ++LS LH++ + H ++KS S+ L + + L D+GF V +K
Sbjct: 136 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 195
Query: 537 ------------ADVFGFGMLVLEIVSGK 553
D++ G++V+E+V G+
Sbjct: 196 PELISRLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 392 GVLYRGTL-PNGCYVAVK--RFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRG 448
G ++ G L + VAVK R + L L R+LK+ S HPN+ + G
Sbjct: 128 GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS--------HPNIVRLIG 179
Query: 449 WCCDNRETIIVYDYYQNGSLDRWLFGVGV-LPWSRRFELIKDVAESLSFLHSKELTHGNL 507
C + IV + Q G +L G L +++ D A + +L SK H +L
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 508 KSSSVFLDVNCKAVLGDYGFFMGSVSSKKAD 538
+ + + + D+G +S ++AD
Sbjct: 240 AARNCLVTEKNVLKISDFG-----MSREEAD 265
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ + + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGF 187
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ + + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGF 187
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 18/151 (11%)
Query: 380 FSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPC 439
FS + T G+ + + N K+ S+ +F L R R+ +++
Sbjct: 19 FSVVRRCVHKTTGLEFAAKIIN-----TKKLSARDFQKLERE--ARICRKLQ-------- 63
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + +V+D G L + + I+ + ES+++ HS
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 500 KELTHGNLKSSSVFLDVNCKAV---LGDYGF 527
+ H NLK ++ L K L D+G
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGL 154
>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 12/122 (9%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA+YSSPI + D T A F I P + G
Sbjct: 42 GRALYSSPIHIWDSKTGNVA---NFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGG 98
Query: 148 PWLGIVN--DACEHYKVFAVEFD----NSNDPNFGDPNDDHVGINLGTAVSFKTADSSES 201
+LG+ N D + + AVEFD + DP+ G D H+GI++ + S T +
Sbjct: 99 GYLGVFNSKDYDKTSQTVAVEFDTFYNTAWDPSNG---DRHIGIDVNSIKSINTKSWALQ 155
Query: 202 NA 203
N
Sbjct: 156 NG 157
>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|C Chain C, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|E Chain E, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 12/114 (10%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA+YSSPI + D T A F I P + G
Sbjct: 42 GRALYSSPIHIWDSKTGNVA---NFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGG 98
Query: 148 PWLGIVN--DACEHYKVFAVEFD----NSNDPNFGDPNDDHVGINLGTAVSFKT 195
+LG+ N D + + AVEFD + DP+ G D H+GI++ + S T
Sbjct: 99 GYLGVFNSKDYDKTSQTVAVEFDTFYNTAWDPSNG---DRHIGIDVNSIKSINT 149
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF---FMGSVSSKK---------- 536
V ++LS LH++ + H ++KS S+ L + + L D+GF V +K
Sbjct: 125 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 184
Query: 537 ------------ADVFGFGMLVLEIVSGK 553
D++ G++V+E+V G+
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 187
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGF 187
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFG----VGVLPWSRRFELIKDVAESLS 495
H +L G C E I+V ++ + GSLD +L + +L W + E+ K +A ++
Sbjct: 71 HKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAWAMH 127
Query: 496 FLHSKELTHGNLKSSSVFL 514
FL L HGN+ + ++ L
Sbjct: 128 FLEENTLIHGNVCAKNILL 146
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 187
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF---FMGSVSSKK---------- 536
V +LS+LH++ + H ++KS S+ L + + L D+GF V +K
Sbjct: 150 VLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMA 209
Query: 537 ------------ADVFGFGMLVLEIVSGK 553
D++ G++V+E++ G+
Sbjct: 210 PEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF---FMGSVSSKK---------- 536
V ++LS LH++ + H ++KS S+ L + + L D+GF V +K
Sbjct: 129 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 188
Query: 537 ------------ADVFGFGMLVLEIVSGK 553
D++ G++V+E+V G+
Sbjct: 189 PELISRLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 34/146 (23%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSL-DRWLFGVGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G + +V ++ G L R L + WS + L+ D+A + ++
Sbjct: 82 HPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 499 SKE--LTHGNLKSSSVFL---DVNCK--AVLGDYGFFMGSVSS----------------- 534
++ + H +L+S ++FL D N A + D+G SV S
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 535 -------KKADVFGFGMLVLEIVSGK 553
+KAD + F M++ I++G+
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 28/122 (22%)
Query: 458 IVYDYYQNGS-LDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDV 516
I+ +Y GS LD L G L + +++++ + L +LHS+ H ++K+++V L
Sbjct: 94 IIMEYLGGGSALD--LLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE 151
Query: 517 NCKAVLGDYG-------------------FFMG------SVSSKKADVFGFGMLVLEIVS 551
L D+G F+M S KAD++ G+ +E+
Sbjct: 152 QGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAK 211
Query: 552 GK 553
G+
Sbjct: 212 GE 213
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F ++ L + + G V+ G + A+K + + L +++ T KRI
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGF 188
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 84/218 (38%), Gaps = 42/218 (19%)
Query: 364 KPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDW 423
KP + E+ R + + K L + G ++ G N VAVK + L+
Sbjct: 1 KPWDKDAWEIPRESIKLVKR--LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEE 58
Query: 424 TRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLF----GVGVLP 479
++K + H L + I+ +Y GSL +L G +LP
Sbjct: 59 ANLMKTLQ--------HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP 110
Query: 480 WSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGS 531
+ + +AE ++++ K H +L++++V + + + D+G +
Sbjct: 111 --KLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 168
Query: 532 VSSK------------------KADVFGFGMLVLEIVS 551
+K K+DV+ FG+L+ EIV+
Sbjct: 169 EGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 31/139 (22%)
Query: 446 IRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGVLPWSRRFELIKDVAESLSFLHSKE 501
+R + +E I I+ +Y +NGSL +L G+ L ++ ++ +AE ++F+ +
Sbjct: 71 VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------------ 535
H +L+++++ + + D+G +K
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 536 KADVFGFGMLVLEIVSGKR 554
K+DV+ FG+L+ EIV+ R
Sbjct: 190 KSDVWSFGILLTEIVTHGR 208
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Query: 404 YVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYY 463
+ A+K + L ++ T V KR+ S+ HP L + V +Y
Sbjct: 44 FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE---HPFLTHMFCTFQTKENLFFVMEYL 100
Query: 464 QNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLG 523
G L + SR ++ L FLHSK + + +LK ++ LD + +
Sbjct: 101 NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIA 160
Query: 524 DYG 526
D+G
Sbjct: 161 DFG 163
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 73 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 133 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 192
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 193 ACKSSDLWALGCIIYQLVAG 212
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 96 HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 156 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 215
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 216 ACKSSDLWALGCIIYQLVAG 235
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 207
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 208 ACKSSDLWALGCIIYQLVAG 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 209 ACKSSDLWALGCIIYQLVAG 228
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 64/175 (36%), Gaps = 28/175 (16%)
Query: 404 YVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYY 463
+ A+K + L ++ T V KR+ S+ HP L + V +Y
Sbjct: 45 FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE---HPFLTHMFCTFQTKENLFFVMEYL 101
Query: 464 QNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLG 523
G L + SR ++ L FLHSK + + +LK ++ LD + +
Sbjct: 102 NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIA 161
Query: 524 DYGF-------------------------FMGSVSSKKADVFGFGMLVLEIVSGK 553
D+G +G + D + FG+L+ E++ G+
Sbjct: 162 DFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 69 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 128
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 129 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 188
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 189 ACKSSDLWALGCIIYQLVAG 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 31/139 (22%)
Query: 446 IRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGVLPWSRRFELIKDVAESLSFLHSKE 501
+R + +E I I+ +Y +NGSL +L G+ L ++ ++ +AE ++F+ +
Sbjct: 72 VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 130
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------------ 535
H +L+++++ + + D+G +K
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 190
Query: 536 KADVFGFGMLVLEIVSGKR 554
K+DV+ FG+L+ EIV+ R
Sbjct: 191 KSDVWSFGILLTEIVTHGR 209
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 31/139 (22%)
Query: 446 IRGWCCDNRETI-IVYDYYQNGSLDRWL---FGVGVLPWSRRFELIKDVAESLSFLHSKE 501
+R + +E I I+ +Y +NGSL +L G+ L ++ ++ +AE ++F+ +
Sbjct: 71 VRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------------ 535
H +L+++++ + + D+G +K
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 536 KADVFGFGMLVLEIVSGKR 554
K+DV+ FG+L+ EIV+ R
Sbjct: 190 KSDVWSFGILLTEIVTHGR 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 209 ACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 209 ACKSSDLWALGCIIYQLVAG 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 68 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 127
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 128 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 187
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 188 ACKSSDLWALGCIIYQLVAG 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 211 ACKSSDLWALGCIIYQLVAG 230
>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
pdb|1RIN|C Chain C, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
Length = 180
Score = 34.3 bits (77), Expect = 0.19, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA+YSSPI + D T A F I P + G
Sbjct: 42 GRALYSSPIHIWDRETGNVA---NFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGG 98
Query: 148 PWLGIVNDACEHYK---VFAVEFDNSNDPNFGDPN-DDHVGINLGTAVSFKT 195
+LG+ N A E+ K AVEFD + + N D H+GI++ + S T
Sbjct: 99 GYLGVFNSA-EYDKTTETVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNT 149
>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|2LTN|C Chain C, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|1BQP|A Chain A, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1BQP|C Chain C, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1HKD|A Chain A, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
pdb|1HKD|C Chain C, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
Length = 181
Score = 34.3 bits (77), Expect = 0.19, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA+YSSPI + D T A F I P + G
Sbjct: 42 GRALYSSPIHIWDRETGNVA---NFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGG 98
Query: 148 PWLGIVNDACEHYK---VFAVEFDNSNDPNFGDPN-DDHVGINLGTAVSFKT 195
+LG+ N A E+ K AVEFD + + N D H+GI++ + S T
Sbjct: 99 GYLGVFNSA-EYDKTTQTVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNT 149
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 211 AXKSSDLWALGCIIYQLVAG 230
>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex
pdb|1OFS|C Chain C, Pea Lectin-sucrose Complex
Length = 187
Score = 34.3 bits (77), Expect = 0.19, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA+YSSPI + D T A F I P + G
Sbjct: 42 GRALYSSPIHIWDRETGNVA---NFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGG 98
Query: 148 PWLGIVNDACEHYK---VFAVEFDNSNDPNFGDPN-DDHVGINLGTAVSFKT 195
+LG+ N A E+ K AVEFD + + N D H+GI++ + S T
Sbjct: 99 GYLGVFNSA-EYDKTTQTVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNT 149
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 66 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 126 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 185
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 186 ACKSSDLWALGCIIYQLVAG 205
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 211 ACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 211 ACKSSDLWALGCIIYQLVAG 230
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 127 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 186
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 187 ACKSSDLWALGCIIYQLVAG 206
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 211
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 212 ACKSSDLWALGCIIYQLVAG 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 94 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 154 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 213
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 214 ACKSSDLWALGCIIYQLVAG 233
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWS----RRFELIKDVAESLS 495
HP++ + + D+ +V + NG ++R+L V P+S R F + + +
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHF--MHQIITGML 126
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS + H +L S++ L N + D+G
Sbjct: 127 YLHSHGILHRDLTLSNLLLTRNMNIKIADFGL 158
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 455 ETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSK-----------ELT 503
E ++ ++ GSL +L G ++ W+ + + ++ LS+LH +
Sbjct: 87 ELWLITAFHDKGSLTDYLKG-NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIA 145
Query: 504 HGNLKSSSVFLDVNCKAVLGDYGF 527
H + KS +V L + AVL D+G
Sbjct: 146 HRDFKSKNVLLKSDLTAVLADFGL 169
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 39/87 (44%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG 526
K + H +LK ++ L+ + + D+G
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFG 174
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG---------------FFMGSV------------ 532
K + H +LK ++ L+ + + D+G F+G+
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 533 SSKKADVFGFGMLVLEIVSG 552
+ K +D++ G ++ ++V+G
Sbjct: 211 ACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 39/87 (44%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG 526
K + H +LK ++ L+ + + D+G
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFG 175
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 458 IVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVN 517
IV +Y +L + G + R E+I D ++L+F H + H ++K +++ +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 518 CKAVLGDYGF 527
+ D+G
Sbjct: 153 NAVKVMDFGI 162
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 458 IVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVN 517
IV +Y +L + G + R E+I D ++L+F H + H ++K +++ +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 518 CKAVLGDYGF 527
+ D+G
Sbjct: 153 NAVKVMDFGI 162
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 458 IVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVN 517
IV +Y +L + G + R E+I D ++L+F H + H ++K +++ +
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 169
Query: 518 CKAVLGDYGF 527
+ D+G
Sbjct: 170 NAVKVMDFGI 179
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 458 IVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVN 517
IV +Y +L + G + R E+I D ++L+F H + H ++K +++ +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 518 CKAVLGDYGF 527
+ D+G
Sbjct: 153 NAVKVMDFGI 162
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 39/87 (44%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP + D+ + Y +NG L +++ +G + ++ +L +LH
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYG 526
K + H +LK ++ L+ + + D+G
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFG 178
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 458 IVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVN 517
IV +Y +L + G + R E+I D ++L+F H + H ++K +++ +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 518 CKAVLGDYGF 527
+ D+G
Sbjct: 153 NAVKVMDFGI 162
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 458 IVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVN 517
IV +Y +L + G + R E+I D ++L+F H + H ++K +++ +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISAT 152
Query: 518 CKAVLGDYGF 527
+ D+G
Sbjct: 153 NAVKVVDFGI 162
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 120
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 121 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFE 176
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 82/221 (37%), Gaps = 39/221 (17%)
Query: 362 PSKPRRFEILELYRATKRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRL 421
P KP + E+ R + + K L + G ++ T VAVK + L
Sbjct: 174 PQKPWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFL 231
Query: 422 DWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGV--GVLP 479
V+K + H L + I+ ++ GSL +L P
Sbjct: 232 AEANVMKTLQ--------HDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 282
Query: 480 WSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGS 531
+ + +AE ++F+ + H +L+++++ + + + D+G +
Sbjct: 283 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342
Query: 532 VSSK------------------KADVFGFGMLVLEIVSGKR 554
+K K+DV+ FG+L++EIV+ R
Sbjct: 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 120
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 121 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 176
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ G + A+K + + L +++ T KRI
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 120
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 121 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 176
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ G + A+K + + L +++ T KRI
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/207 (17%), Positives = 82/207 (39%), Gaps = 32/207 (15%)
Query: 374 YRATKRFSKMEVLASDTRGVLYR-GTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISS 432
+++ +++ + ++ + G++ + G VA+K+F ++ + + R +K +
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 433 ITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAE 492
+ H NL + C + +V+++ + LD L + + + +
Sbjct: 81 LR-----HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIIN 135
Query: 493 SLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF------------------------- 527
+ F HS + H ++K ++ + + L D+GF
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
Query: 528 FMGSVSSKKA-DVFGFGMLVLEIVSGK 553
+G V KA DV+ G LV E+ G+
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 22/156 (14%)
Query: 405 VAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ 464
VAVK E +R D+ R + ++ + H ++ G C + R ++V++Y +
Sbjct: 74 VAVKAL--KEASESARQDFQREAELLTMLQ-----HQHIVRFFGVCTEGRPLLMVFEYMR 126
Query: 465 NGSLDRWL---------------FGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKS 509
+G L+R+L G L + + VA + +L H +L +
Sbjct: 127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT 186
Query: 510 SSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGFGML 545
+ + +GD+G S+ V G ML
Sbjct: 187 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ G + A+K + + L +++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ G + A+K + + L +++ T KRI
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 440 HPNLAPIRGWCCDNRETI---IVYDYYQNGSLDRWL--FGVGVLPWSRRFELIKDVAESL 494
H ++ +G CC++ +V +Y GSL +L +G+ ++ + + E +
Sbjct: 92 HEHIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGL---AQLLLFAQQICEGM 147
Query: 495 SFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
++LH++ H +L + +V LD + +GD+G
Sbjct: 148 AYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGL 180
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ G + A+K + + L +++ T KRI
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + DYG G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 94
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 95 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFE 150
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 151 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 182
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 451 CDNRETIIVYDYYQNGSLDRWLFGV-GVLPWSRRFELIKDVAESLSFLHSKELTHGNLKS 509
C ++V + G L ++L G +P S EL+ V+ + +L K H NL +
Sbjct: 405 CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAA 464
Query: 510 SSVFLDVNCKAVLGDYGF 527
+V L A + D+G
Sbjct: 465 RNVLLVNRHYAKISDFGL 482
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ G + A+K + + L +++ T KRI
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 92
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 93 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 148
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 180
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ G + A+K + + L +++ T KRI
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 92
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 93 --FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--AAQIVLTFE 148
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 180
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 59/150 (39%), Gaps = 5/150 (3%)
Query: 378 KRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTN 436
K FS + + + G +Y + N VA+K+ S + S W ++K + +
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG--KQSNEKWQDIIKEVRFLQKL 111
Query: 437 VPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSF 496
HPN RG +V +Y + D L + + L++
Sbjct: 112 R--HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 169
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAVLGDYG 526
LHS + H ++K+ ++ L LGD+G
Sbjct: 170 LHSHNMIHRDVKAGNILLSEPGLVKLGDFG 199
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 86
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 87 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 142
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 143 YLHSLDLIYRDLKPENLLIDEQGYIQVTDFGF 174
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 22/156 (14%)
Query: 405 VAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ 464
VAVK + E +R D+ R + ++ + H ++ G C + R ++V++Y +
Sbjct: 51 VAVK--ALKEASESARQDFQREAELLTMLQ-----HQHIVRFFGVCTEGRPLLMVFEYMR 103
Query: 465 NGSLDRWL---------------FGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKS 509
+G L+R+L G L + + VA + +L H +L +
Sbjct: 104 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT 163
Query: 510 SSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGFGML 545
+ + +GD+G S+ V G ML
Sbjct: 164 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ +G + A+K + + L +++ T KRI
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 156 YLHSLDLIYRDLKPENLIIDQQGYIQVTDFGF 187
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 378 KRFSKMEVLASDTRGVLYR-GTLPNGCYVAVKRFSSNE---FLHLSRLDWTRVLKRISSI 433
+++ K+ + + GV+++ G VA+K+F +E + L R+LK++
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-- 60
Query: 434 TTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNG---SLDRWLFGVGVLPWSRRFELIKDV 490
HPNL + R +V++Y + LDR+ GV P +
Sbjct: 61 ------HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGV---PEHLVKSITWQT 111
Query: 491 AESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
++++F H H ++K ++ + + L D+GF
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGF 148
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Query: 421 LDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPW 480
+DW + K + +N HP L + V +Y G L + LP
Sbjct: 49 IDWVQTEKHVFEQASN---HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 105
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYG 526
+++ +L++LH + + + +LK +V LD L DYG
Sbjct: 106 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG 151
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 22/156 (14%)
Query: 405 VAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ 464
VAVK + E +R D+ R + ++ + H ++ G C + R ++V++Y +
Sbjct: 45 VAVK--ALKEASESARQDFQREAELLTMLQ-----HQHIVRFFGVCTEGRPLLMVFEYMR 97
Query: 465 NGSLDRWL---------------FGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKS 509
+G L+R+L G L + + VA + +L H +L +
Sbjct: 98 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT 157
Query: 510 SSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGFGML 545
+ + +GD+G S+ V G ML
Sbjct: 158 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 421 LDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPW 480
+DW + K + +N HP L + V +Y G L + LP
Sbjct: 96 IDWVQTEKHVFEQASN---HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 152
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+++ +L++LH + + + +LK +V LD L DYG
Sbjct: 153 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Query: 421 LDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPW 480
+DW + K + +N HP L + V +Y G L + LP
Sbjct: 53 IDWVQTEKHVFEQASN---HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 109
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYG 526
+++ +L++LH + + + +LK +V LD L DYG
Sbjct: 110 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG 155
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 34/146 (23%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSL-DRWLFGVGVLPWSRRFELIKDVAESLSFLH 498
HPN+ + G + +V ++ G L R L + WS + L+ D+A + ++
Sbjct: 82 HPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 499 SKE--LTHGNLKSSSVFL---DVNCK--AVLGDYGFFMGSVSS----------------- 534
++ + H +L+S ++FL D N A + D+ SV S
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 535 -------KKADVFGFGMLVLEIVSGK 553
+KAD + F M++ I++G+
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 59/150 (39%), Gaps = 5/150 (3%)
Query: 378 KRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTN 436
K FS + + + G +Y + N VA+K+ S + S W ++K + +
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG--KQSNEKWQDIIKEVRFLQKL 72
Query: 437 VPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSF 496
HPN RG +V +Y + D L + + L++
Sbjct: 73 R--HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAVLGDYG 526
LHS + H ++K+ ++ L LGD+G
Sbjct: 131 LHSHNMIHRDVKAGNILLSEPGLVKLGDFG 160
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ G + A+K + + L +++ T KRI
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-- 100
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 101 --FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 156
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+GF
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF 188
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Query: 421 LDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPW 480
+DW + K + +N HP L + V +Y G L + LP
Sbjct: 64 IDWVQTEKHVFEQASN---HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 120
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYG 526
+++ +L++LH + + + +LK +V LD L DYG
Sbjct: 121 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG 166
>pdb|2B7Y|B Chain B, Fava Bean Lectin-Glucose Complex
pdb|2B7Y|D Chain D, Fava Bean Lectin-Glucose Complex
Length = 51
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 254 EYMFVGFSASTGDSSQIHSILSWEFFS 280
E++ +GFSA+TG H +LSW F S
Sbjct: 18 EWVRIGFSATTGAEYATHEVLSWTFLS 44
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 48/210 (22%)
Query: 384 EVLASDTRGVLYRG-TLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCH-P 441
EV+ S V+ P VA+KR + L + +LK I +++ CH P
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRIN----LEKCQTSMDELLKEIQAMSQ---CHHP 73
Query: 442 NLAPIRGWCCDNRETIIVYDYYQNGS-LD-------RWLFGVGVLPWSRRFELIKDVAES 493
N+ E +V GS LD + GVL S ++++V E
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 494 LSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF------------------FMGS---- 531
L +LH H ++K+ ++ L + + D+G F+G+
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 532 ---VSSK------KADVFGFGMLVLEIVSG 552
V + KAD++ FG+ +E+ +G
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 31/137 (22%)
Query: 400 PNGCYVAVKRFS----SNEF-------LHLSRLDWTRVLKRISSITTNVPCHPNLAPIRG 448
P G YV V+R + SNE LH+S+L HPN+ P R
Sbjct: 50 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF----------------NHPNIVPYRA 93
Query: 449 WCCDNRETIIVYDYYQNGSLDRWL---FGVGVLPWSRRFELIKDVAESLSFLHSKELTHG 505
+ E +V + GS + F G+ + + +++ V ++L ++H H
Sbjct: 94 TFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY-ILQGVLKALDYIHHMGYVHR 152
Query: 506 NLKSSSVFLDVNCKAVL 522
++K+S + + V+ K L
Sbjct: 153 SVKASHILISVDGKVYL 169
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDV--NCKAVLGDYGF 527
++L FLH E HGN+ + ++F+D + L YGF
Sbjct: 170 DALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGF 207
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 31/137 (22%)
Query: 400 PNGCYVAVKRFS----SNEF-------LHLSRLDWTRVLKRISSITTNVPCHPNLAPIRG 448
P G YV V+R + SNE LH+S+L HPN+ P R
Sbjct: 34 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF----------------NHPNIVPYRA 77
Query: 449 WCCDNRETIIVYDYYQNGSLDRWL---FGVGVLPWSRRFELIKDVAESLSFLHSKELTHG 505
+ E +V + GS + F G+ + + +++ V ++L ++H H
Sbjct: 78 TFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY-ILQGVLKALDYIHHMGYVHR 136
Query: 506 NLKSSSVFLDVNCKAVL 522
++K+S + + V+ K L
Sbjct: 137 SVKASHILISVDGKVYL 153
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 60
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 61 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 113
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ LSF HS + H +LK ++ ++ L D+G
Sbjct: 114 QGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 82/214 (38%), Gaps = 48/214 (22%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVP 438
+ EV+ S V+ P VA+KR + L + +LK I +++
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN----LEKCQTSMDELLKEIQAMSQ--- 64
Query: 439 CH-PNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGV--------GVLPWSRRFELIKD 489
CH PN+ E +V GS+ + + GVL S ++++
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF------------------FMGS 531
V E L +LH H ++K+ ++ L + + D+G F+G+
Sbjct: 125 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 532 -------VSSK------KADVFGFGMLVLEIVSG 552
V + KAD++ FG+ +E+ +G
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 187
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 183
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 188
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 181
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 189
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 180
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 187
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 187
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 181
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYR 209
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 203
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLD----RWLFGVGV-LPWSRRFEL 486
HPN+ + + +V+++ D L G+ + L S F+L
Sbjct: 61 --------HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQL 112
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 113 L----QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 149
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 187
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 188
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 44/225 (19%)
Query: 361 PPSKPRRFEILELYRATKR----FSKMEVLASDTRGVLYRGT-LPNGCYVAVKRFSSNEF 415
PP R+ + L+ TK+ F +E L + G +Y+ G VA+K+
Sbjct: 10 PPR--RQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES- 66
Query: 416 LHLSRLDWTRVLKRISSITTNVPCH-PNLAPIRGWCCDNRETIIVYDYYQNGSL-DRWLF 473
D ++K IS + C P++ G N + IV +Y GS+ D
Sbjct: 67 ------DLQEIIKEISIMQQ---CDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL 117
Query: 474 GVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYG------- 526
L +++ + L +LH H ++K+ ++ L+ A L D+G
Sbjct: 118 RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177
Query: 527 ------------FFMGSVSSKK------ADVFGFGMLVLEIVSGK 553
F+M ++ AD++ G+ +E+ GK
Sbjct: 178 XMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 82/209 (39%), Gaps = 45/209 (21%)
Query: 378 KRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSIT 434
+++ K+E + T GV+Y+ G VA+KR + +E + + + +LK +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH--- 77
Query: 435 TNVPCHPNLAPIRGWCCDNRETIIVYDYYQ---NGSLDRWLFGVGVLPWS-RRFELIKDV 490
HPN+ + R +V+++ + LD G+ ++L++ V
Sbjct: 78 -----HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 491 AESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF----------------------- 527
A H + H +LK ++ ++ + L D+G
Sbjct: 133 AHC----HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
Query: 528 --FMGSVS-SKKADVFGFGMLVLEIVSGK 553
MGS S D++ G + E+++GK
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 185
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 191
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 183
>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex
pdb|2B7Y|C Chain C, Fava Bean Lectin-Glucose Complex
Length = 182
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA+YS PI + D T A F I P + G
Sbjct: 43 GRALYSLPIHIWDSETGNVA---DFTTTFIFVIDAPNGYNVADGFTFFIAPVDTKPQTGG 99
Query: 148 PWLGIVN--DACEHYKVFAVEFDNSNDPNFGDPNDD--HVGINLGTAVSFKTADSSESNA 203
+LG+ N D + + AVEFD + + DP++ H+GI++ T S T + N
Sbjct: 100 GYLGVFNGKDYDKTAQTVAVEFDTFYNAAW-DPSNGKRHIGIDVNTIKSISTKSWNLQNG 158
Query: 204 SLHH 207
H
Sbjct: 159 EEAH 162
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 82/209 (39%), Gaps = 45/209 (21%)
Query: 378 KRFSKMEVLASDTRGVLYRGTLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSIT 434
+++ K+E + T GV+Y+ G VA+KR + +E + + + +LK +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH--- 77
Query: 435 TNVPCHPNLAPIRGWCCDNRETIIVYDYYQ---NGSLDRWLFGVGVLPWS-RRFELIKDV 490
HPN+ + R +V+++ + LD G+ ++L++ V
Sbjct: 78 -----HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 491 AESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF----------------------- 527
A H + H +LK ++ ++ + L D+G
Sbjct: 133 AHC----HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
Query: 528 --FMGSVS-SKKADVFGFGMLVLEIVSGK 553
MGS S D++ G + E+++GK
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L ++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+G
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGL 187
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 490 VAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSSKKADVFGF 542
+ L ++HS + H +LK S++ L+ C + D+G + V+ D GF
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHTGF 185
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Query: 379 RFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNV 437
+F +++ L + + G V+ + G + A+K + + L ++ T KRI
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN-- 99
Query: 438 PCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVL--PWSRRFELIKDVAESLS 495
P L + DN +V +Y G + L +G P +R + + +
Sbjct: 100 --FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--AAQIVLTFE 155
Query: 496 FLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+LHS +L + +LK ++ +D + D+G
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGL 187
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 424 TRV-LKRISSITTNVPCHPNLAPIRGWCCDNRETII-VYDYYQNGSLD--RWLFGVGVLP 479
TRV +K+IS C L I+ E +I + D + +L+ R ++ V L
Sbjct: 69 TRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLM 128
Query: 480 WSRRFELIK--------------DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDY 525
+ ++L+K + L ++HS + H +LK S++ ++ C + D+
Sbjct: 129 ETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDF 188
Query: 526 GFFMGSVSSKKADVFGF 542
G + ++ + D GF
Sbjct: 189 G--LARIADPEHDHTGF 203
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 159 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 218
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 219 APEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 68/188 (36%), Gaps = 46/188 (24%)
Query: 405 VAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ 464
VAVK S + D L I +++ H N+ + G C +++ +Y
Sbjct: 79 VAVKMLKST-----AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 465 NGSLDRWL------------FGVGVLPWSRR--FELIKDVAESLSFLHSKELTHGNLKSS 510
G L +L F + S R VA+ ++FL SK H ++ +
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 193
Query: 511 SVFLDVNCKAVLGDYGF---------------------------FMGSVSSKKADVFGFG 543
+V L A +GD+G V + ++DV+ +G
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 544 MLVLEIVS 551
+L+ EI S
Sbjct: 254 ILLWEIFS 261
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 185
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 195
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 186
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 185
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 140 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 199
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + + D R +V + Y+ G L + +IK V +++LH
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK 154
Query: 500 KELTHGNLKSSSVFLDVNCKAVL 522
+ H +LK ++ L+ K L
Sbjct: 155 HNIVHRDLKPENLLLESKEKDAL 177
>pdb|3BN9|B Chain B, Crystal Structure Of Mt-Sp1 In Complex With Fab Inhibitor
E2
pdb|3BN9|A Chain A, Crystal Structure Of Mt-Sp1 In Complex With Fab Inhibitor
E2
pdb|3NCL|A Chain A, Crystal Structure Of Mt-Sp1 Bound To Benzamidine
Phosphonate Inhibitor
pdb|3NPS|A Chain A, Crystal Structure Of Membrane-Type Serine Protease 1
(Mt-Sp1) In Complex With The Fab Inhibitor S4
pdb|3SO3|A Chain A, Structures Of Fab-Protease Complexes Reveal A Highly
Specific Non- Canonical Mechanism Of Inhibition
Length = 241
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 36 PGIR----TNVTKHLFFSNFTSNYEIKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAI 91
PG++ + H FF++FT +Y+I LL ++ ++ P P H + AG+AI
Sbjct: 73 PGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVR-PISLPDASHVFPAGKAI 131
Query: 92 Y 92
+
Sbjct: 132 W 132
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 186
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYR 196
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 185
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 128 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 187
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 191
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 195
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYR 196
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 67
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 68 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 120
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 156
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 194
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 129 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 188
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 189 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 191
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYR 196
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 61 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 109
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 208
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 195
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 196
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 60
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 61 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 113
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 194
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 191
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 67
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 68 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 120
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 121 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 156
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 201
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 209
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 201
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 61
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 62 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 114
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 209
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 65 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 113
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 153
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 63 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 111
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 64 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 112
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 63 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 111
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 59
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 60 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 112
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 64 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 112
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYR 212
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 208
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 61 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 109
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 62 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 110
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 60
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 61 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 113
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 26/42 (61%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 62 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 110
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 26/42 (61%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL 167
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 200
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G G V+++
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 201
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 26/42 (61%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL 194
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 26/42 (61%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
LI + L ++HS ++ H +LK S++ ++ +C+ + D+G
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL 171
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 61 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 109
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 68/188 (36%), Gaps = 46/188 (24%)
Query: 405 VAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ 464
VAVK S + D L I +++ H N+ + G C +++ +Y
Sbjct: 79 VAVKMLKST-----AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 465 NGSLDRWL------------FGVGVLPWSRR--FELIKDVAESLSFLHSKELTHGNLKSS 510
G L +L F + S R VA+ ++FL SK H ++ +
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 193
Query: 511 SVFLDVNCKAVLGDYGF---------------------------FMGSVSSKKADVFGFG 543
+V L A +GD+G V + ++DV+ +G
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 544 MLVLEIVS 551
+L+ EI S
Sbjct: 254 ILLWEIFS 261
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 63 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 111
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 151
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 60
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 61 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 113
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 59
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 60 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 112
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 59
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 60 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 112
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 62 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 110
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 59
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 60 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 112
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ L +++ + LP + + +
Sbjct: 61 --------HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--L 109
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 64
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 65 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 117
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 153
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 431 SSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGV--------GVLP--W 480
+S+ CH ++ + G + T++V + +G L +L + G P
Sbjct: 71 ASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
++ ++A+ +++L++K+ H NL + + + + +GD+G
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGM 176
>pdb|1EAW|A Chain A, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti
(Aprotinin) Complex
pdb|1EAW|C Chain C, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti
(Aprotinin) Complex
pdb|1EAX|A Chain A, Crystal Structure Of Mtsp1 (Matriptase)
pdb|2GV6|A Chain A, Crystal Structure Of Matriptase With Inhibitor Cj-730
pdb|2GV7|A Chain A, Structure Of Matriptase In Complex With Inhibitor Cj-672
Length = 241
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 36 PGIR----TNVTKHLFFSNFTSNYEIKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAI 91
PG++ + H FF++FT +Y+I LL ++ ++ P P H + AG+AI
Sbjct: 73 PGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVR-PICLPDASHVFPAGKAI 131
Query: 92 Y 92
+
Sbjct: 132 W 132
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 431 SSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGV--------GVLP--W 480
+S+ CH ++ + G + T++V + +G L +L + G P
Sbjct: 72 ASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 130
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
++ ++A+ +++L++K+ H NL + + + + +GD+G
Sbjct: 131 QEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGM 177
>pdb|3P8G|A Chain A, Crystal Structure Of Mt-Sp1 In Complex With Benzamidine
pdb|3P8F|A Chain A, Crystal Structure Of Mt-Sp1 In Complex With Sfti-1
Length = 241
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 36 PGIR----TNVTKHLFFSNFTSNYEIKLLGNASISQDKGFIQIPDPSPAVDHAYQAGRAI 91
PG++ + H FF++FT +Y+I LL ++ ++ P P H + AG+AI
Sbjct: 73 PGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVR-PICLPDASHVFPAGKAI 131
Query: 92 Y 92
+
Sbjct: 132 W 132
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 489 DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
++A +L +LHS + + +LK ++ LD VL D+G
Sbjct: 147 EIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL 185
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 452 DNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSS 511
D+ +V++ Q GS+ + +++DVA +L FLH+K + H +LK +
Sbjct: 82 DDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPEN 141
Query: 512 VFLD 515
+ +
Sbjct: 142 ILCE 145
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 13/151 (8%)
Query: 377 TKRFSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSR----LDWTRVLKRIS 431
+ R+ +++ L S G VL G A+K + S LD VLK++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVA 491
HPN+ + + D R +V + Y+ G L + ++K V
Sbjct: 63 --------HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVL 114
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVL 522
++LH + H +LK ++ L+ + L
Sbjct: 115 SGTTYLHKHNIVHRDLKPENLLLESKSRDAL 145
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLD----RWLFGVGV-LPWSRRFEL 486
HPN+ + + +V+++ D L G+ + L S F+L
Sbjct: 63 --------HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL 114
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 115 L----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 421 LDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPW 480
LD VLK++ HPN+ + + D R +V + Y+ G L +
Sbjct: 69 LDEVAVLKQLD--------HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE 120
Query: 481 SRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVL 522
++K V ++LH + H +LK ++ L+ + L
Sbjct: 121 VDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDAL 162
>pdb|1BQP|B Chain B, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1BQP|D Chain D, The Structure Of The Pea Lectin-D-Mannopyranose Complex
Length = 47
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 254 EYMFVGFSASTGDSSQIHSILSWEFFS 280
E++ +GFSA+TG H +LSW F S
Sbjct: 18 EWVRIGFSATTGAEYAAHEVLSWSFHS 44
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLD----RWLFGVGV-LPWSRRFEL 486
HPN+ + + +V+++ D L G+ + L S F+L
Sbjct: 64 --------HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL 115
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 116 L----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|1RIN|D Chain D, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
pdb|1RIN|B Chain B, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
Length = 49
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 254 EYMFVGFSASTGDSSQIHSILSWEFFS 280
E++ +GFSA+TG H +LSW F S
Sbjct: 18 EWVRIGFSATTGAEYAAHEVLSWSFHS 44
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 40/196 (20%)
Query: 386 LASDTRGVLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAP 445
L + G ++ G N VAVK + L+ ++K + H L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQ--------HDKLVR 71
Query: 446 IRGWCCDNRETIIVYDYYQNGSLDRWLF----GVGVLPWSRRFELIKDVAESLSFLHSKE 501
+ I+ ++ GSL +L G +LP + + +AE ++++ K
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN 129
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF--------FMGSVSSK------------------ 535
H +L++++V + + + D+G + +K
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 189
Query: 536 KADVFGFGMLVLEIVS 551
K++V+ FG+L+ EIV+
Sbjct: 190 KSNVWSFGILLYEIVT 205
>pdb|1OFS|B Chain B, Pea Lectin-sucrose Complex
pdb|1OFS|D Chain D, Pea Lectin-sucrose Complex
Length = 48
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 254 EYMFVGFSASTGDSSQIHSILSWEFFS 280
E++ +GFSA+TG H +LSW F S
Sbjct: 18 EWVRIGFSATTGAEYAAHEVLSWSFHS 44
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELI 487
HPN+ + + +V+++ + L +++ + LP + + +
Sbjct: 64 --------HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSY--L 112
Query: 488 KDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIK--- 488
HPN+ + + +V+++ S+D F LIK
Sbjct: 64 --------HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYL 112
Query: 489 -DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 152
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 19/160 (11%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIK--- 488
HPN+ + + +V+++ S+D F LIK
Sbjct: 62 --------HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYL 110
Query: 489 -DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 150
>pdb|2LTN|B Chain B, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|2LTN|D Chain D, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|1HKD|B Chain B, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
pdb|1HKD|D Chain D, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
Length = 52
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 254 EYMFVGFSASTGDSSQIHSILSWEFFS 280
E++ +GFSA+TG H +LSW F S
Sbjct: 18 EWVRIGFSATTGAEYAAHEVLSWSFHS 44
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + D+ IV + Y G L + +IK V ++++H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 500 KELTHGNLKSSSVFL---DVNCKAVLGDYGF 527
+ H +LK ++ L + +C + D+G
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 440 HPNLAPIRGWCCDNR----ETIIVYDYYQNGSL----DRWLFGVGVLPWSRRFELIKDVA 491
HPN+ + +C R E ++ +++ G+L +R L + L+ +
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYG 526
L +H+K H +LK +++ L + VL D G
Sbjct: 145 RGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 451 CDNRETIIVYDYYQNGSLDRWLFGV-GVLPWSRRFELIKDVAESLSFLHSKELTHGNLKS 509
C ++V + G L ++L G +P S EL+ V+ + +L K H +L +
Sbjct: 79 CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAA 138
Query: 510 SSVFLDVNCKAVLGDYGF 527
+V L A + D+G
Sbjct: 139 RNVLLVNRHYAKISDFGL 156
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
L+ + L ++HS + H +LK S+V ++ +C+ + D+G G V+++
Sbjct: 128 LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYR 187
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E++ GK
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLD 515
+++DVA +L FLH+K + H +LK ++ +
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCE 145
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLD 515
+++DVA +L FLH+K + H +LK ++ +
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCE 145
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 479 PWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
P +R F ++ + + +LH+ + H +LK ++FL+ + +GD+G
Sbjct: 126 PEARYF--MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 172
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + D+ IV + Y G L + +IK V ++++H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 500 KELTHGNLKSSSVFL---DVNCKAVLGDYGF 527
+ H +LK ++ L + +C + D+G
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 376 ATKRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRIS 431
+ + F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 432 SITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGS---LDRWLFGVGVLPWSRRFELIK 488
HPN+ + + +V+++ +D LP + + +
Sbjct: 64 --------HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSY--LF 113
Query: 489 DVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L+F HS + H +LK ++ ++ L D+G
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + D+ IV + Y G L + +IK V ++++H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 500 KELTHGNLKSSSVFL---DVNCKAVLGDYGF 527
+ H +LK ++ L + +C + D+G
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 479 PWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
P +R F ++ + + +LH+ + H +LK ++FL+ + +GD+G
Sbjct: 142 PEARYF--MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 188
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 479 PWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
P +R F ++ + + +LH+ + H +LK ++FL+ + +GD+G
Sbjct: 142 PEARYF--MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 188
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 479 PWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
P +R F ++ + + +LH+ + H +LK ++FL+ + +GD+G
Sbjct: 142 PEARYF--MRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGL 188
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 452 DNRETIIVYDYYQNGSLDRWLFGV-GVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSS 510
D +V DYY G L L LP I ++ ++ +H H ++K
Sbjct: 145 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPD 204
Query: 511 SVFLDVNCKAVLGDYG 526
+V LDVN L D+G
Sbjct: 205 NVLLDVNGHIRLADFG 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 452 DNRETIIVYDYYQNGSLDRWLFGV-GVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSS 510
D +V DYY G L L LP I ++ ++ +H H ++K
Sbjct: 161 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPD 220
Query: 511 SVFLDVNCKAVLGDYG 526
+V LDVN L D+G
Sbjct: 221 NVLLDVNGHIRLADFG 236
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 42/91 (46%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 42/91 (46%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LOF|D Chain D, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
Length = 52
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 254 EYMFVGFSASTGDSSQIHSILSWEFFS 280
E++ +GFSA+TG H +LSW F S
Sbjct: 18 EWVRIGFSATTGAEFAAHEVLSWYFHS 44
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 65/184 (35%), Gaps = 42/184 (22%)
Query: 405 VAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ 464
VAVK S + D L I +++ H N+ + G C +++ +Y
Sbjct: 71 VAVKMLKST-----AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 125
Query: 465 NGSLDRWLFGVGVLPWSRR----------FELIKDVAESLSFLHSKELTHGNLKSSSVFL 514
G L +L + VA+ ++FL SK H ++ + +V L
Sbjct: 126 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 185
Query: 515 DVNCKAVLGDYGF---------------------------FMGSVSSKKADVFGFGMLVL 547
A +GD+G V + ++DV+ +G+L+
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 245
Query: 548 EIVS 551
EI S
Sbjct: 246 EIFS 249
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+K+ + E + + + +LK ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---- 59
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGS---LDRWLFGVGVLPWSRRFELIKDVAE 492
HPN+ + + +V+++ +D LP + + + + +
Sbjct: 60 ----HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSY--LFQLLQ 113
Query: 493 SLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
L+F HS + H +LK ++ ++ L D+G
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|1LOA|B Chain B, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|D Chain D, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|F Chain F, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|H Chain H, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOB|B Chain B, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|D Chain D, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|F Chain F, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|H Chain H, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOC|B Chain B, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|D Chain D, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|F Chain F, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|H Chain H, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|B Chain B, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|D Chain D, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|F Chain F, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|H Chain H, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOE|B Chain B, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOE|D Chain D, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOF|B Chain B, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
pdb|1LOG|B Chain B, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
pdb|1LOG|D Chain D, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
Length = 52
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 254 EYMFVGFSASTGDSSQIHSILSWEFFS 280
E++ +GFSA+TG H +LSW F S
Sbjct: 18 EWVRIGFSATTGAEFAAHEVLSWYFHS 44
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 65/184 (35%), Gaps = 42/184 (22%)
Query: 405 VAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ 464
VAVK S + D L I +++ H N+ + G C +++ +Y
Sbjct: 79 VAVKMLKST-----AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 465 NGSLDRWLFGVGVLPWSRR----------FELIKDVAESLSFLHSKELTHGNLKSSSVFL 514
G L +L + VA+ ++FL SK H ++ + +V L
Sbjct: 134 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 193
Query: 515 DVNCKAVLGDYGF---------------------------FMGSVSSKKADVFGFGMLVL 547
A +GD+G V + ++DV+ +G+L+
Sbjct: 194 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 253
Query: 548 EIVS 551
EI S
Sbjct: 254 EIFS 257
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 15/164 (9%)
Query: 371 LELYRATKRFSKMEVLASDTRGVLYRGTLPN-GCYVAVK------RFSSNEFLHLSRLDW 423
L++ KR+ K++ L +Y+ N VA+K R + + ++ + L
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE 62
Query: 424 TRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRR 483
++L+ +S HPN+ + +V+D+ + VL S
Sbjct: 63 IKLLQELS--------HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHI 114
Query: 484 FELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ + L +LH + H +LK +++ LD N L D+G
Sbjct: 115 KAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGL 158
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 47/205 (22%)
Query: 385 VLASDTRGVLYRG-TLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNL 443
VL T G++Y G L N +A+K + SR +++ L ++ ++ H N+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SR--YSQPLHEEIALHKHLK-HKNI 67
Query: 444 APIRGWCCDNRETIIVYDYYQNGSLDRWL---FGVGVLPWSRRFELI----KDVAESLSF 496
G +N I + GSL L +G P + I K + E L +
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG----PLKDNEQTIGFYTKQILEGLKY 123
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAV-LGDYGF-------------FMGSVS--------- 533
LH ++ H ++K +V ++ + + D+G F G++
Sbjct: 124 LHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK 183
Query: 534 -----SKKADVFGFGMLVLEIVSGK 553
K AD++ G ++E+ +GK
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Query: 375 RATKRFSKMEVLASDTRGVLYRGTLP-NGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSI 433
R T F ++E + S G +++ +GC A+KR S + L S +D L+ + +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR--SKKPLAGS-VDEQNALREVYAH 64
Query: 434 TTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSL-DRWLFGVGVLPWSRRFEL---IKD 489
+ W D+ +I +Y GSL D ++ + + EL +
Sbjct: 65 AVLGQHSHVVRYFSAWAEDDH-MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123
Query: 490 VAESLSFLHSKELTHGNLKSSSVFL 514
V L ++HS L H ++K S++F+
Sbjct: 124 VGRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 32/164 (19%)
Query: 378 KRFSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSI 433
+++ K+E + T G +++ VA+KR +E + S L +LK +
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-- 59
Query: 434 TTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ----------NGSLDRWLFGVGVLPWSRR 483
H N+ + +++ +V+++ NG LD + S
Sbjct: 60 ------HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK------SFL 107
Query: 484 FELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
F+L+K L F HS+ + H +LK ++ ++ N + L D+G
Sbjct: 108 FQLLK----GLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGL 147
>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|2LAL|C Chain C, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|1LEM|A Chain A, The Monosaccharide Binding Site Of Lentil Lectin: An X-Ray
And Molecular Modelling Study
pdb|1LEN|A Chain A, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
pdb|1LEN|C Chain C, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
pdb|1LES|A Chain A, Lentil Lectin Complexed With Sucrose
pdb|1LES|C Chain C, Lentil Lectin Complexed With Sucrose
Length = 181
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 6/111 (5%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA+YS+PI + D T A F I P + G
Sbjct: 42 GRALYSTPIHIWDRDTGNVA---NFVTSFTFVIDAPSSYNVADGFTFFIAPVDTKPQTGG 98
Query: 148 PWLGIVN--DACEHYKVFAVEFDNSNDPNFGDPNDD-HVGINLGTAVSFKT 195
+LG+ N + + + AVEFD + + N + H+GI++ + S T
Sbjct: 99 GYLGVFNSKEYDKTSQTVAVEFDTFYNAAWDPSNKERHIGIDVNSIKSVNT 149
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 28/146 (19%)
Query: 405 VAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETIIVYDYYQ 464
VAVK S + D L I +++ H N+ + G C +++ +Y
Sbjct: 64 VAVKMLKST-----AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 118
Query: 465 NGSLDRWL-------FGVGVLPWS----------RRFEL------IKDVAESLSFLHSKE 501
G L +L G + P R EL VA+ ++FL SK
Sbjct: 119 YGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN 178
Query: 502 LTHGNLKSSSVFLDVNCKAVLGDYGF 527
H ++ + +V L A +GD+G
Sbjct: 179 CIHRDVAARNVLLTNGHVAKIGDFGL 204
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 375 RATKRFSKMEVLASDTRGVLYRGTLP-NGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSI 433
R T F ++E + S G +++ +GC A+KR S + L S +D L+ + +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR--SKKPLAGS-VDEQNALREVYAH 62
Query: 434 TTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSL-DRWLFGVGVLPWSRRFEL---IKD 489
+ H ++ ++ +I +Y GSL D ++ + + EL +
Sbjct: 63 AV-LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 490 VAESLSFLHSKELTHGNLKSSSVFL 514
V L ++HS L H ++K S++F+
Sbjct: 122 VGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 30/174 (17%)
Query: 406 AVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNLAPIRGWCCDNRETI-IVYDYYQ 464
A+K + + ++ T V KR+ ++ P L C + + V +Y
Sbjct: 48 AIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHS----CFQTVDRLYFVMEYVN 103
Query: 465 NGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGD 524
G L + VG + +++ L FLH + + + +LK +V LD + D
Sbjct: 104 GGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIAD 163
Query: 525 YGF----FMGSVSS---------------------KKADVFGFGMLVLEIVSGK 553
+G M V++ K D + +G+L+ E+++G+
Sbjct: 164 FGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 375 RATKRFSKMEVLASDTRGVLYRGTLP-NGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSI 433
R T F ++E + S G +++ +GC A+KR S + L S +D L+ + +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR--SKKPLAGS-VDEQNALREVYAH 62
Query: 434 TTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSL-DRWLFGVGVLPWSRRFEL---IKD 489
+ H ++ ++ +I +Y GSL D ++ + + EL +
Sbjct: 63 AV-LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 490 VAESLSFLHSKELTHGNLKSSSVFL 514
V L ++HS L H ++K S++F+
Sbjct: 122 VGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 47/205 (22%)
Query: 385 VLASDTRGVLYRG-TLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVPCHPNL 443
VL T G++Y G L N +A+K + SR +++ L ++ ++ H N+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SR--YSQPLHEEIALHKHLK-HKNI 81
Query: 444 APIRGWCCDNRETIIVYDYYQNGSLDRWL---FGVGVLPWSRRFELI----KDVAESLSF 496
G +N I + GSL L +G P + I K + E L +
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG----PLKDNEQTIGFYTKQILEGLKY 137
Query: 497 LHSKELTHGNLKSSSVFLDVNCKAV-LGDYGF-------------FMGSVS--------- 533
LH ++ H ++K +V ++ + + D+G F G++
Sbjct: 138 LHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK 197
Query: 534 -----SKKADVFGFGMLVLEIVSGK 553
K AD++ G ++E+ +GK
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1LGB|B Chain B, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 53
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 254 EYMFVGFSASTGDSSQIHSILSWEF 278
E++ +GFSA+TG H +LSW F
Sbjct: 18 EWVRIGFSATTGAEFAAHEVLSWYF 42
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 375 RATKRFSKMEVLASDTRGVLYRGTLP-NGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSI 433
R T F ++E + S G +++ +GC A+KR S + L S +D L+ + +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR--SKKPLAGS-VDEQNALREVYAH 60
Query: 434 TTNVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSL-DRWLFGVGVLPWSRRFEL---IKD 489
+ H ++ ++ +I +Y GSL D ++ + + EL +
Sbjct: 61 AV-LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 119
Query: 490 VAESLSFLHSKELTHGNLKSSSVFL 514
V L ++HS L H ++K S++F+
Sbjct: 120 VGRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 42/91 (46%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + D G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/88 (18%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELI-KDVAESLSFLH 498
HPN+ + I+ ++ G++D + + + +++ K ++L++LH
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYG 526
++ H +LK+ ++ ++ L D+G
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFG 180
>pdb|1LGC|B Chain B, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|D Chain D, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|F Chain F, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 53
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 254 EYMFVGFSASTGDSSQIHSILSWEF 278
E++ +GFSA+TG H +LSW F
Sbjct: 18 EWVRIGFSATTGAEFAAHEVLSWYF 42
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/88 (18%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELI-KDVAESLSFLH 498
HPN+ + I+ ++ G++D + + + +++ K ++L++LH
Sbjct: 66 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 125
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYG 526
++ H +LK+ ++ ++ L D+G
Sbjct: 126 DNKIIHRDLKAGNILFTLDGDIKLADFG 153
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/88 (18%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELI-KDVAESLSFLH 498
HPN+ + I+ ++ G++D + + + +++ K ++L++LH
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYG 526
++ H +LK+ ++ ++ L D+G
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFG 180
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+ + + E + + + +LK ++
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN---- 60
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 61 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 113
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Query: 380 FSKMEVLASDTRGVLYRG-TLPNGCYVAVKRF---SSNEFLHLSRLDWTRVLKRISSITT 435
F K+E + T GV+Y+ G VA+ + + E + + + +LK ++
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN---- 59
Query: 436 NVPCHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGV----LPWSRRFELIKDVA 491
HPN+ + + +V+++ L +++ + LP + + + +
Sbjct: 60 ----HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY--LFQLL 112
Query: 492 ESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
+ L+F HS + H +LK ++ ++ L D+G
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/88 (18%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELI-KDVAESLSFLH 498
HPN+ + I+ ++ G++D + + + +++ K ++L++LH
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYG 526
++ H +LK+ ++ ++ L D+G
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFG 180
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYG 526
+ +++ LS LH ++ H ++K +V L N + L D+G
Sbjct: 134 ICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFG 174
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L
pdb|1AVB|B Chain B, Arcelin-1 From Phaseolus Vulgaris L
Length = 226
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 76/203 (37%), Gaps = 33/203 (16%)
Query: 88 GRAIYSSPIRLLDPLTATPAXXXXXXXXXXXXXXXXXXXXXXXXLAFVIVPDEFTVGRAG 147
GRA YS+PI++ D T LAF +VP G
Sbjct: 44 GRAFYSAPIQIND---RTIDNLASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPKLKG 100
Query: 148 PWLGIVN----DACEHYKVFAVEFDNSNDPNFGDPNDDHVGINLGTAVSFKTADSSESNA 203
+LG+ N D H AV FD ++ + I++ + T ES
Sbjct: 101 RYLGLFNTTNYDRDAH--TVAVVFDTVSN---------RIEIDVNSIRPIAT----ESCN 145
Query: 204 SLHHDDVVHRAWIRYDGHRNWIEIYLGVDGDTVPSQXXXXXXXXXXXXXXE---YMFVGF 260
H++ I YD +N + + L PS E ++ VGF
Sbjct: 146 FGHNNGEKAEVRITYDSPKNDLRVSL-----LYPSSEEKCHVSATVPLEKEVEDWVSVGF 200
Query: 261 SASTG---DSSQIHSILSWEFFS 280
SA++G ++++ H++LSW F S
Sbjct: 201 SATSGSKKETTETHNVLSWSFSS 223
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 479 PWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
P +R + ++ + +LH + H +LK ++FL+ + + +GD+G
Sbjct: 115 PEARYY--LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 161
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 479 PWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
P +R + ++ + +LH + H +LK ++FL+ + + +GD+G
Sbjct: 117 PEARYY--LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 479 PWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
P +R + ++ + +LH + H +LK ++FL+ + + +GD+G
Sbjct: 117 PEARYY--LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 479 PWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
P +R + ++ + +LH + H +LK ++FL+ + + +GD+G
Sbjct: 139 PEARYY--LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 185
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 479 PWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
P +R + ++ + +LH + H +LK ++FL+ + + +GD+G
Sbjct: 121 PEARYY--LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 167
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 479 PWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
P +R + ++ + +LH + H +LK ++FL+ + + +GD+G
Sbjct: 141 PEARYY--LRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 187
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDY 525
LI + L ++HS ++ H +LK S++ ++ +C+ + D+
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 20/170 (11%)
Query: 365 PRRFEILELYRATKRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKRFS--SNEFLHLSRL 421
P+R +Y + F +L GV+ T P G VA+K+ L L
Sbjct: 2 PKRI----VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 422 DWTRVLKRISSITTNVPCHPNLAPI----RGWCCDNRETIIVYDYYQNGSLDRWLFGVGV 477
++LK H N+ I R +N + + L R + +
Sbjct: 58 REIKILKHFK--------HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHR-VISTQM 108
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
L I ++ LH + H +LK S++ ++ NC + D+G
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 20/170 (11%)
Query: 365 PRRFEILELYRATKRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKRFS--SNEFLHLSRL 421
P+R +Y + F +L GV+ T P G VA+K+ L L
Sbjct: 2 PKRI----VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 422 DWTRVLKRISSITTNVPCHPNLAPI----RGWCCDNRETIIVYDYYQNGSLDRWLFGVGV 477
++LK H N+ I R +N + + L R + +
Sbjct: 58 REIKILKHFK--------HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHR-VISTQM 108
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
L I ++ LH + H +LK S++ ++ NC + D+G
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/76 (18%), Positives = 33/76 (43%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HPN+ + D + +V ++Y+ G L + ++K + + +LH
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK 164
Query: 500 KELTHGNLKSSSVFLD 515
+ H ++K ++ L+
Sbjct: 165 HNIVHRDIKPENILLE 180
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/91 (18%), Positives = 42/91 (46%), Gaps = 23/91 (25%)
Query: 486 LIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------FMGSVSSK--- 535
LI + L ++HS ++ H +LK S++ ++ +C+ + +G G V+++
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYR 189
Query: 536 -------------KADVFGFGMLVLEIVSGK 553
D++ G ++ E+++G+
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 487 IKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF-------------FMGSVS 533
+ ++A +L LHS + + +LK ++ LD L D+G F G+V
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191
Query: 534 ------------SKKADVFGFGMLVLEIVSG 552
++ AD + FG+L+ E+++G
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 5/156 (3%)
Query: 380 FSKMEVLASDTRG-VLYRGTLPNGCYVAVKRFSSNEFLHLSRLDWTRVLKRISSITTNVP 438
F +++L T G V+ G Y A+K + + T R+ T
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR--- 63
Query: 439 CHPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLH 498
HP L ++ + V +Y G L L V R ++ +L +LH
Sbjct: 64 -HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 499 SKELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSS 534
S+++ + ++K ++ LD + + D+G +S
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 20/170 (11%)
Query: 365 PRRFEILELYRATKRFSKMEVLASDTRGVLYRGT-LPNGCYVAVKRFS--SNEFLHLSRL 421
P+R +Y + F +L GV+ T P G VA+K+ L L
Sbjct: 2 PKRI----VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 422 DWTRVLKRISSITTNVPCHPNLAPI----RGWCCDNRETIIVYDYYQNGSLDRWLFGVGV 477
++LK H N+ I R +N + + L R + +
Sbjct: 58 REIKILKHFK--------HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHR-VISTQM 108
Query: 478 LPWSRRFELIKDVAESLSFLHSKELTHGNLKSSSVFLDVNCKAVLGDYGF 527
L I ++ LH + H +LK S++ ++ NC + D+G
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP L ++ + V +Y G L L V R ++ +L +LHS
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSS 534
+++ + ++K ++ LD + + D+G +S
Sbjct: 127 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 161
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 440 HPNLAPIRGWCCDNRETIIVYDYYQNGSLDRWLFGVGVLPWSRRFELIKDVAESLSFLHS 499
HP L ++ + V +Y G L L V R ++ +L +LHS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 500 KELTHGNLKSSSVFLDVNCKAVLGDYGFFMGSVSS 534
+++ + ++K ++ LD + + D+G +S
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,879,451
Number of Sequences: 62578
Number of extensions: 719136
Number of successful extensions: 2895
Number of sequences better than 100.0: 574
Number of HSP's better than 100.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 270
Number of HSP's that attempted gapping in prelim test: 2354
Number of HSP's gapped (non-prelim): 682
length of query: 620
length of database: 14,973,337
effective HSP length: 105
effective length of query: 515
effective length of database: 8,402,647
effective search space: 4327363205
effective search space used: 4327363205
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)