Query 038182
Match_columns 245
No_of_seqs 228 out of 1328
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 14:14:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038182.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038182hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lya_A Cathepsin D; lysosomal 99.9 9.7E-24 3.3E-28 159.9 9.5 90 114-237 4-96 (97)
2 3vla_A EDGP; extracellular, in 99.8 2.7E-20 9.4E-25 173.5 9.2 105 110-236 6-118 (413)
3 2bju_A Plasmepsin II; aspartic 99.8 5.8E-20 2E-24 173.5 11.1 92 113-238 128-220 (453)
4 3psg_A Pepsinogen; hydrolase(a 99.8 1.8E-19 6.3E-24 165.5 9.3 93 112-238 45-138 (370)
5 1b5f_A Protein (cardosin A); h 99.8 2.2E-19 7.5E-24 155.5 9.3 91 114-238 4-96 (239)
6 1mpp_A Pepsin; hydrolase(acid 99.8 5.5E-19 1.9E-23 161.0 11.8 94 110-237 5-100 (361)
7 3cms_A Chymosin B; hydrolase, 99.8 3.1E-19 1E-23 160.5 8.9 90 114-237 5-95 (323)
8 2x0b_A Renin; hydrolase-hormon 99.8 2.8E-19 9.6E-24 165.3 8.7 92 113-238 51-145 (383)
9 1am5_A Pepsin, acid proteinase 99.8 2.8E-19 9.6E-24 160.7 8.4 91 113-237 2-93 (324)
10 4aa9_A Chymosin; hydrolase, as 99.8 3.1E-19 1.1E-23 159.9 7.5 89 115-237 3-92 (320)
11 1tzs_A Cathepsin E; hydrolase, 99.8 4.7E-19 1.6E-23 161.1 8.7 93 112-238 12-105 (351)
12 3k1w_A Renin; protease, altern 99.8 6.3E-19 2.2E-23 159.0 9.2 94 110-237 5-101 (341)
13 1dpj_A Proteinase A; proteinas 99.8 5.8E-19 2E-23 159.0 8.8 91 114-238 4-95 (329)
14 2apr_A Rhizopuspepsin; hydrola 99.8 2E-18 6.8E-23 155.5 12.2 83 124-238 13-97 (325)
15 3c9x_A Trichoderma reesei aspa 99.8 1.2E-18 4E-23 157.2 9.8 84 124-237 13-98 (329)
16 1htr_B Gastricsin; aspartyl pr 99.8 5.5E-19 1.9E-23 159.1 7.6 88 115-237 5-93 (329)
17 3fv3_A SAPP1P-secreted asparti 99.8 2.5E-18 8.6E-23 155.1 11.7 89 113-238 3-98 (339)
18 1oew_A Endothiapepsin; hydrola 99.8 1.7E-18 5.7E-23 156.2 10.3 83 124-237 13-97 (329)
19 1miq_A Plasmepsin; aspartic pr 99.8 1.4E-18 4.7E-23 159.9 9.7 91 113-237 52-143 (375)
20 3aup_A SBG7S, BG, basic 7S glo 99.8 2.1E-18 7.2E-23 159.7 10.6 105 111-237 8-120 (403)
21 1j71_A Candidapepsin, aspartic 99.8 2.5E-18 8.7E-23 155.2 10.5 91 112-237 2-103 (334)
22 2qzx_A Candidapepsin-5; aspart 99.7 3.8E-18 1.3E-22 154.4 10.5 90 113-237 3-103 (342)
23 3qvc_A Histo-aspartic protease 99.7 3.6E-18 1.2E-22 161.1 9.0 93 112-238 126-219 (451)
24 3pvk_A Candidapepsin-2; hydrol 99.7 1.1E-17 3.9E-22 150.8 11.0 90 113-237 3-103 (342)
25 2ewy_A Beta-secretase 2; BACE2 99.7 9.8E-18 3.3E-22 153.7 10.3 77 126-237 13-90 (383)
26 1qdm_A Prophytepsin; aspartic 99.7 8.4E-18 2.9E-22 159.6 9.4 92 113-238 42-135 (478)
27 2qp8_A Beta-secretase 1; BACE1 99.7 2.1E-17 7.1E-22 152.4 9.9 77 126-237 21-98 (395)
28 3vf3_A Beta-secretase 1; struc 99.7 2.9E-17 9.9E-22 151.6 10.0 77 126-237 28-105 (402)
29 3lpj_A Beta-secretase 1; alzhe 99.7 5E-17 1.7E-21 152.8 10.0 77 126-237 74-151 (455)
30 1wkr_A Polyporopepsin; hydrola 99.7 5E-16 1.7E-20 140.3 11.7 78 114-237 4-81 (340)
31 1yg9_A Aspartic protease BLA G 99.6 2.6E-16 9E-21 142.0 8.6 90 112-238 6-98 (330)
32 1ibq_A Aspergillopepsin; aspar 99.6 2E-15 7E-20 135.8 10.1 80 124-237 12-93 (325)
33 1izd_A Aspartic proteinase; su 99.6 1.6E-15 5.3E-20 136.5 9.3 80 125-238 14-95 (323)
34 1bxo_A Protein (penicillopepsi 99.6 1E-15 3.5E-20 137.6 6.2 80 125-238 14-95 (323)
35 1t6e_X Xylanase inhibitor; two 99.6 1.6E-15 5.5E-20 139.4 6.2 95 113-237 3-106 (381)
36 3liy_A Protease; hydrolase, hy 74.3 3 0.0001 31.7 3.7 29 129-157 12-43 (116)
37 1fmb_A EIAV protease; hydrolas 73.8 3.8 0.00013 30.4 4.2 28 127-156 8-35 (104)
38 2hs1_A HIV-1 protease; ultra-h 73.2 3.4 0.00012 30.5 3.8 27 128-156 9-35 (99)
39 2i1a_A DNA damage-inducible pr 66.1 6.2 0.00021 30.2 4.1 31 125-157 24-54 (148)
40 3ec0_A Protease; HIV-2, inhibi 65.6 6 0.00021 29.1 3.7 26 128-155 9-34 (99)
41 2hah_A Protease, retropepsin; 58.1 11 0.00036 28.6 4.0 27 128-157 15-41 (116)
42 3sqf_A Protease; folded monome 51.1 18 0.00061 27.3 4.2 27 129-157 11-37 (114)
43 3s8i_A Protein DDI1 homolog 1; 47.7 18 0.00063 28.1 4.0 30 126-157 23-52 (148)
44 3c9x_A Trichoderma reesei aspa 44.0 28 0.00095 30.1 5.0 41 113-157 184-230 (329)
45 1bxo_A Protein (penicillopepsi 39.3 29 0.001 29.8 4.4 41 113-157 180-224 (323)
46 1b5f_A Protein (cardosin A); h 39.2 38 0.0013 27.8 4.9 32 126-157 188-227 (239)
47 1oew_A Endothiapepsin; hydrola 38.0 31 0.0011 29.7 4.4 41 113-157 183-229 (329)
48 1ibq_A Aspergillopepsin; aspar 36.3 40 0.0014 29.0 4.7 41 113-157 179-225 (325)
49 2apr_A Rhizopuspepsin; hydrola 36.1 34 0.0012 29.4 4.3 41 113-157 184-229 (325)
50 1izd_A Aspartic proteinase; su 35.7 37 0.0013 29.2 4.5 41 113-157 180-225 (323)
51 3slz_A GAG-Pro-POL polyprotein 34.8 41 0.0014 25.8 4.0 28 127-156 22-49 (132)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 34.0 34 0.0012 28.3 3.7 27 127-155 8-34 (203)
53 2rsp_A RSV protease; hydrolase 33.3 37 0.0013 25.8 3.5 19 139-157 30-48 (124)
54 1lya_B Cathepsin D; lysosomal 26.8 60 0.002 26.4 4.1 32 126-157 99-137 (241)
55 1qdm_A Prophytepsin; aspartic 25.8 74 0.0025 29.3 4.9 32 126-157 231-270 (478)
56 1mpp_A Pepsin; hydrolase(acid 23.4 99 0.0034 26.7 5.1 44 113-157 197-248 (361)
No 1
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=9.7e-24 Score=159.90 Aligned_cols=90 Identities=24% Similarity=0.353 Sum_probs=77.9
Q ss_pred eeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCC--CCCCCCCCCCCCCCCCCCCCCcceeccCCC
Q 038182 114 KIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKG--ENCPKDGLTPPNRMFHADASSTFKTIPCSS 190 (245)
Q Consensus 114 ~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~--~~C~~~~~~~~~~~fdps~SsT~~~v~C~s 190 (245)
.+||.+. .+.+|+++|.||||||++.|+|||||+++||+|. |.. ..|..+ +.|||++|+||+..
T Consensus 4 ~~~l~n~---~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~------~~y~p~~SsT~~~~---- 70 (97)
T 1lya_A 4 PEVLKNY---MDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIH------HKYNSDKSSTYVKN---- 70 (97)
T ss_dssp EEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTS------CCBCGGGCTTCEEE----
T ss_pred eEeeEEC---CCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCC------CCCCchhCCCceeC----
Confidence 4788753 3489999999999999999999999999999999 862 247653 58999999999875
Q ss_pred cccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 191 RTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 191 ~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.||||+..|.+++|+|.|++
T Consensus 71 ---------------------~~~~~i~Yg~Gs~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 ---------------------GTSFDIHYGSGSLSGYLSQDTVSVPC 96 (97)
T ss_dssp ---------------------EEEEEEECSSCEEEEEEEEEEEEESC
T ss_pred ---------------------CCcEEEEECCcEEEEEEEEEEEEECC
Confidence 28999999999999999999999975
No 2
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=99.81 E-value=2.7e-20 Score=173.55 Aligned_cols=105 Identities=18% Similarity=0.378 Sum_probs=85.6
Q ss_pred CceeeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecCCCCCCCCCCCCCCCCCCCCCCCCCcceeccCC
Q 038182 110 SNIVKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCNHKGENCPKDGLTPPNRMFHADASSTFKTIPCS 189 (245)
Q Consensus 110 ~~~~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~ 189 (245)
.+.+.+||+.+. .+++|+++|.||||||+|.|+|||||+++||||. .|+ +|+||+.++|.
T Consensus 6 ~~~~~~pv~~d~--~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~----~c~--------------~Sst~~~v~C~ 65 (413)
T 3vla_A 6 PSALVVPVKKDA--STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD----QNY--------------VSSTYRPVRCR 65 (413)
T ss_dssp CSEEEEEEEECT--TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS----SSC--------------CCTTCEECBTT
T ss_pred CccEEEEeeecC--CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC----CCC--------------CCCCcCccCCC
Confidence 456889999875 6799999999999999999999999999999997 131 69999999999
Q ss_pred CcccccccccccC------CCCCCCCCCCCcEEEEec-CCce-EEEEEEEEEEEC
Q 038182 190 SRTCKVDLQDTFS------LSMCPTPVTPCAYDYRFV-YKYA-SGIIFFNILCIK 236 (245)
Q Consensus 190 s~~C~~~~~~~~~------~~~C~~~~~~C~y~~~Yg-dgs~-~G~l~~D~v~l~ 236 (245)
++.|.......+. ...|. ++.|.|.+.|+ ||+. .|+|++|+|+|+
T Consensus 66 s~~C~~~~~~~~~~c~s~~~~~c~--~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~ 118 (413)
T 3vla_A 66 TSQCSLSGSIACGDCFNGPRPGCN--NNTCGVFPENPVINTATGGEVAEDVVSVE 118 (413)
T ss_dssp SHHHHHTTCCEEECCSSCCBTTBC--SSEEEECCEETTTTEECCEEEEEEEEEEE
T ss_pred cccccccccCCCcccccCCCCCCC--CCcCcceeecCcCCceeeeEEEEEEEEec
Confidence 9999864321110 12343 34699999994 8887 999999999996
No 3
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=99.81 E-value=5.8e-20 Score=173.45 Aligned_cols=92 Identities=20% Similarity=0.315 Sum_probs=80.1
Q ss_pred eeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCc
Q 038182 113 VKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSR 191 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~ 191 (245)
..+||.+. .+++|+++|.||||||++.|++||||+++||+|. |....|..+ +.|||++|+||+..
T Consensus 128 ~~~~L~n~---~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~------~~ydps~SsT~~~~----- 193 (453)
T 2bju_A 128 DNIELVDF---QNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTK------HLYDSSKSRTYEKD----- 193 (453)
T ss_dssp EEEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGS------CCBCGGGCTTCEEE-----
T ss_pred CceeeEec---CCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCC------CcCCCccCCceeEC-----
Confidence 45788753 3489999999999999999999999999999999 975568654 58999999998764
Q ss_pred ccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECcc
Q 038182 192 TCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKM 238 (245)
Q Consensus 192 ~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~~ 238 (245)
.|.|.+.||||+..|.+++|+|+|++.
T Consensus 194 --------------------~~~~~i~YgdGs~~G~~~~Dtv~ig~~ 220 (453)
T 2bju_A 194 --------------------GTKVEMNYVSGTVSGFFSKDLVTVGNL 220 (453)
T ss_dssp --------------------EEEEEEECSSSEEEEEEEEEEEEETTE
T ss_pred --------------------CcEEEEEcCCCCeEEEEEEEEEEEeCc
Confidence 289999999999999999999999863
No 4
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=99.79 E-value=1.8e-19 Score=165.49 Aligned_cols=93 Identities=26% Similarity=0.429 Sum_probs=81.2
Q ss_pred eeeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCC
Q 038182 112 IVKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSS 190 (245)
Q Consensus 112 ~~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s 190 (245)
...+||.+. .+.+|+++|.||||||++.|++||||+++||+|. |....|..+ +.|||++|+||+..
T Consensus 45 ~~~~~l~n~---~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~------~~y~~~~SsT~~~~---- 111 (370)
T 3psg_A 45 IGDEPLENY---LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDH------NQFNPDDSSTFEAT---- 111 (370)
T ss_dssp SCCCTTGGG---TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS------CCBCGGGCTTCEEE----
T ss_pred cceecceec---cCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCC------CCCCCccCcCcEEC----
Confidence 456788754 4589999999999999999999999999999999 976567654 68999999999764
Q ss_pred cccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECcc
Q 038182 191 RTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKM 238 (245)
Q Consensus 191 ~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~~ 238 (245)
.|.|.+.||+|+..|++++|+|+|++.
T Consensus 112 ---------------------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~ 138 (370)
T 3psg_A 112 ---------------------SQELSITYGTGSMTGILGYDTVQVGGI 138 (370)
T ss_dssp ---------------------EEEEEEESSSCEEEEEEEEEEEEETTE
T ss_pred ---------------------CcEEEEEeCCceEEEEEEEEEEeeCCc
Confidence 288999999999899999999999864
No 5
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.79 E-value=2.2e-19 Score=155.52 Aligned_cols=91 Identities=25% Similarity=0.427 Sum_probs=77.6
Q ss_pred eeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCC-CCCCCCCCCCCCCCCCCCCCCcceeccCCCc
Q 038182 114 KIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKG-ENCPKDGLTPPNRMFHADASSTFKTIPCSSR 191 (245)
Q Consensus 114 ~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~-~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~ 191 (245)
.+||.+. .+++|+++|.||||+|++.|+|||||+++||+|. |.. ..|..+ +.|||++|+||+..
T Consensus 4 ~~~l~n~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~------~~y~~~~SsT~~~~----- 69 (239)
T 1b5f_A 4 VVALTND---RDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAH------SMYESSDSSTYKEN----- 69 (239)
T ss_dssp EEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTS------CCBCGGGCTTCEEE-----
T ss_pred eeeeeec---CCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCC------CCCCCccCCCeeeC-----
Confidence 4677754 3489999999999999999999999999999999 852 247654 57999999998764
Q ss_pred ccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECcc
Q 038182 192 TCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKM 238 (245)
Q Consensus 192 ~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~~ 238 (245)
.|.|.+.|+||+..|.+++|+|.|++.
T Consensus 70 --------------------~~~~~i~Yg~Gs~~G~~~~D~v~~g~~ 96 (239)
T 1b5f_A 70 --------------------GTFGAIIYGTGSITGFFSQDSVTIGDL 96 (239)
T ss_dssp --------------------EEEEEEECSSCEEEEEEEEEEEEETTE
T ss_pred --------------------CcEEEEEECCCcEEEEEEEEEEEECCc
Confidence 278999999998899999999999863
No 6
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=99.78 E-value=5.5e-19 Score=161.04 Aligned_cols=94 Identities=29% Similarity=0.457 Sum_probs=81.7
Q ss_pred CceeeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CC-CCCCCCCCCCCCCCCCCCCCCCcceecc
Q 038182 110 SNIVKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HK-GENCPKDGLTPPNRMFHADASSTFKTIP 187 (245)
Q Consensus 110 ~~~~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~-~~~C~~~~~~~~~~~fdps~SsT~~~v~ 187 (245)
.+....||.+. .+++|+++|.||||+|++.|+|||||+++||+|. |. ...|..+ +.|||++|+||+..
T Consensus 5 g~~~~~~l~~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~------~~y~~~~SsT~~~~- 74 (361)
T 1mpp_A 5 GSVDTPGLYDF---DLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK------RFFDPSSSSTFKET- 74 (361)
T ss_dssp CCEEEEEEEET---TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS------CCBCGGGCTTCEEE-
T ss_pred CccceEEeecC---CCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC------CcCCCccCCceEec-
Confidence 45567899864 3489999999999999999999999999999999 97 3458764 58999999999864
Q ss_pred CCCcccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 188 CSSRTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 188 C~s~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.|+||+..|.+++|+|+|++
T Consensus 75 ------------------------~~~~~i~Yg~Gs~~G~~~~D~v~~g~ 100 (361)
T 1mpp_A 75 ------------------------DYNLNITYGTGGANGIYFRDSITVGG 100 (361)
T ss_dssp ------------------------EEEEEEECSSCEEEEEEEEEEEEETT
T ss_pred ------------------------CCeEEEEECCceEEEEEEEEEEEECC
Confidence 28999999999989999999999985
No 7
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=99.78 E-value=3.1e-19 Score=160.54 Aligned_cols=90 Identities=27% Similarity=0.486 Sum_probs=78.5
Q ss_pred eeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcc
Q 038182 114 KIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRT 192 (245)
Q Consensus 114 ~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~ 192 (245)
..||.+. .+++|+++|.||||||++.|++||||+++||+|. |....|..+ +.|||++|+||+..
T Consensus 5 ~~~l~n~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~------~~y~~~~SsT~~~~------ 69 (323)
T 3cms_A 5 SVPLTNY---LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNH------QRFDPRKSSTFQNL------ 69 (323)
T ss_dssp EEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS------CCBCGGGCTTCEEE------
T ss_pred eeeeEec---cCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCC------CCCCCccCCCeEEC------
Confidence 4688764 3489999999999999999999999999999999 854458654 57999999999764
Q ss_pred cccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 193 CKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 193 C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.|+||+..|.+++|+|+|++
T Consensus 70 -------------------~~~~~i~Yg~Gs~~G~~~~D~v~ig~ 95 (323)
T 3cms_A 70 -------------------GKPLSIHYGTGSMQGILGYDTVTVSN 95 (323)
T ss_dssp -------------------EEEEEEEETTEEEEEEEEEEEEEETT
T ss_pred -------------------CcEEEEEeCCCCeEEEEEEEEEEECC
Confidence 38999999999889999999999986
No 8
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=99.78 E-value=2.8e-19 Score=165.26 Aligned_cols=92 Identities=25% Similarity=0.448 Sum_probs=79.8
Q ss_pred eeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCC--CCCCCCCCCCCCCCCCCCCCCcceeccCC
Q 038182 113 VKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKG--ENCPKDGLTPPNRMFHADASSTFKTIPCS 189 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~--~~C~~~~~~~~~~~fdps~SsT~~~v~C~ 189 (245)
..+||.+. .+.+|+++|.||||||+|.|+|||||+++||+|. |.. ..|..+ +.|||++|+||+..
T Consensus 51 ~~~~l~n~---~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~------~~y~~~~SsT~~~~--- 118 (383)
T 2x0b_A 51 SSVILTNY---MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH------KLFDASDSSSYKHN--- 118 (383)
T ss_dssp CEEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTS------CCBCGGGCTTCEEE---
T ss_pred ceEeeeec---CCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCC------CCCCCCCCCcEEEC---
Confidence 45788863 3589999999999999999999999999999999 863 358654 57999999999764
Q ss_pred CcccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECcc
Q 038182 190 SRTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKM 238 (245)
Q Consensus 190 s~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~~ 238 (245)
.|.|.+.||+|+..|++++|+|+|++.
T Consensus 119 ----------------------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~ 145 (383)
T 2x0b_A 119 ----------------------GTELTLRYSTGTVSGFLSQDIITVGGI 145 (383)
T ss_dssp ----------------------EEEEEEECSSCEEEEEEEEEEEEETTE
T ss_pred ----------------------CcEEEEEcCCccEEEEEEeeEEEEcCc
Confidence 389999999998899999999999864
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=99.78 E-value=2.8e-19 Score=160.71 Aligned_cols=91 Identities=22% Similarity=0.410 Sum_probs=78.9
Q ss_pred eeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCc
Q 038182 113 VKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSR 191 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~ 191 (245)
+.+||.+. .+++|+++|.||||||++.|++||||+++||+|. |....|..+ +.|||++|+||+..
T Consensus 2 ~~~~l~n~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~------~~y~~~~SsT~~~~----- 67 (324)
T 1am5_A 2 VTEQMKNE---ADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNH------NKFKPRQSSTYVET----- 67 (324)
T ss_dssp EEEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTS------CCBCGGGCTTCEEE-----
T ss_pred ceeeeecC---CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCC------CcCCCccCCCeEeC-----
Confidence 35788763 3489999999999999999999999999999999 864458653 57999999998764
Q ss_pred ccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 192 TCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 192 ~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.||||+..|.+++|+|+|++
T Consensus 68 --------------------~~~~~i~Yg~Gs~~G~~~~D~v~~g~ 93 (324)
T 1am5_A 68 --------------------GKTVDLTYGTGGMRGILGQDTVSVGG 93 (324)
T ss_dssp --------------------EEEEEEECSSCEEEEEEEEEEEESSS
T ss_pred --------------------CcEEEEEECCCCeEEEEEECceeECC
Confidence 28999999999889999999999985
No 10
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=99.77 E-value=3.1e-19 Score=159.88 Aligned_cols=89 Identities=27% Similarity=0.466 Sum_probs=74.6
Q ss_pred eeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCccc
Q 038182 115 IPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTC 193 (245)
Q Consensus 115 ~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C 193 (245)
+||.+. .+.+|+++|.||||||++.|++||||+++||+|. |....|..+ +.|||++|+||+..
T Consensus 3 ~~l~n~---~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~------~~y~~~~SsT~~~~------- 66 (320)
T 4aa9_A 3 EPLTSY---LDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNH------HRFDPRKSSTFRNL------- 66 (320)
T ss_dssp -----C---CCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS------CCBCGGGCTTCEEE-------
T ss_pred ccceec---cCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCC------CCCCCCCCcCeEcC-------
Confidence 466653 4589999999999999999999999999999999 875457653 58999999999875
Q ss_pred ccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 194 KVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 194 ~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.||||+..|.+++|+|+|++
T Consensus 67 ------------------~~~~~i~Yg~gs~~G~~~~D~v~ig~ 92 (320)
T 4aa9_A 67 ------------------GKPLSIHYGTGSMEGFLGYDTVTVSN 92 (320)
T ss_dssp ------------------EEEEEEEETTEEEEEEEEEEEEEETT
T ss_pred ------------------CcEEEEEECCcEEEEEEEEEEEEECC
Confidence 28999999999889999999999986
No 11
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=99.77 E-value=4.7e-19 Score=161.14 Aligned_cols=93 Identities=28% Similarity=0.421 Sum_probs=78.8
Q ss_pred eeeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCC
Q 038182 112 IVKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSS 190 (245)
Q Consensus 112 ~~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s 190 (245)
...+||.+. .+++|+++|.||||+|++.|++||||+++||+|. |....|..+ +.|||++|+||+..
T Consensus 12 ~~~~~l~n~---~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~------~~y~~~~SsT~~~~---- 78 (351)
T 1tzs_A 12 SAKEPLINY---LDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTH------SRFQPSQSSTYSQP---- 78 (351)
T ss_dssp --CCTTGGG---SSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS------CCBCGGGCTTCBCC----
T ss_pred ccceeceec---CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCC------CcCCcccCcceEEC----
Confidence 345788753 3489999999999999999999999999999999 975468754 58999999998653
Q ss_pred cccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECcc
Q 038182 191 RTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKM 238 (245)
Q Consensus 191 ~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~~ 238 (245)
.|.|.+.||||+..|.+++|+|+|++.
T Consensus 79 ---------------------~~~~~i~Yg~Gs~~G~~~~D~v~ig~~ 105 (351)
T 1tzs_A 79 ---------------------GQSFSIQYGTGSLSGIIGADQVSVEGL 105 (351)
T ss_dssp ---------------------SCEEEEESSSCEEEEEEEEEEEEETTE
T ss_pred ---------------------CCEEEEEeCCCCeEEEEEEeEEEECCe
Confidence 389999999998899999999999863
No 12
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=99.77 E-value=6.3e-19 Score=159.02 Aligned_cols=94 Identities=24% Similarity=0.443 Sum_probs=81.0
Q ss_pred CceeeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCC--CCCCCCCCCCCCCCCCCCCCCcceec
Q 038182 110 SNIVKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKG--ENCPKDGLTPPNRMFHADASSTFKTI 186 (245)
Q Consensus 110 ~~~~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~--~~C~~~~~~~~~~~fdps~SsT~~~v 186 (245)
+..+.+||.+.. +.+|+++|.||||||++.|++||||+++||+|. |.. ..|..+ +.|||++|+||+..
T Consensus 5 ~~~~~~~l~n~~---d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~------~~y~~~~SsT~~~~ 75 (341)
T 3k1w_A 5 NTTSSVILTNYM---DTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH------KLFDASDSSSYKHN 75 (341)
T ss_dssp CBCEEEEEEEET---TTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTS------CCBCGGGCTTCEEE
T ss_pred CCCccccceEcc---CCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCC------CCCCCCcCcCeeEC
Confidence 456788998753 489999999999999999999999999999999 862 247543 58999999998763
Q ss_pred cCCCcccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 187 PCSSRTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 187 ~C~s~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.|++|+..|.+++|+|+|++
T Consensus 76 -------------------------~~~~~i~Yg~gs~~G~~~~D~v~ig~ 101 (341)
T 3k1w_A 76 -------------------------GTELTLRYSTGTVSGFLSQDIITVGG 101 (341)
T ss_dssp -------------------------EEEEEEEETTEEEEEEEEEEEEEETT
T ss_pred -------------------------CCEEEEEECCcEEEEEEEEEEEEECC
Confidence 38999999999889999999999986
No 13
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=99.77 E-value=5.8e-19 Score=158.97 Aligned_cols=91 Identities=27% Similarity=0.470 Sum_probs=77.9
Q ss_pred eeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcc
Q 038182 114 KIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRT 192 (245)
Q Consensus 114 ~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~ 192 (245)
.+||.+. .+++|+++|.||||+|++.|++||||+++||+|. |....|..+ +.|||++|+||+..
T Consensus 4 ~~~l~~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~------~~y~~~~SsT~~~~------ 68 (329)
T 1dpj_A 4 DVPLTNY---LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH------SKYDHEASSSYKAN------ 68 (329)
T ss_dssp EEECEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS------CCBCGGGCTTCEEE------
T ss_pred ceeeeec---CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc------CcCCcccCcCeEEC------
Confidence 5677754 3489999999999999999999999999999999 865457654 57999999998753
Q ss_pred cccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECcc
Q 038182 193 CKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKM 238 (245)
Q Consensus 193 C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~~ 238 (245)
.|.|.+.|+||+..|.+++|+|+|++.
T Consensus 69 -------------------~~~~~i~Yg~Gs~~G~~~~D~v~ig~~ 95 (329)
T 1dpj_A 69 -------------------GTEFAIQYGTGSLEGYISQDTLSIGDL 95 (329)
T ss_dssp -------------------EEEEEEEETTEEEEEEEEEEEEEETTE
T ss_pred -------------------CcEEEEEECCceEEEEEEEEEEEECCe
Confidence 389999999996699999999999863
No 14
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=99.77 E-value=2e-18 Score=155.49 Aligned_cols=83 Identities=23% Similarity=0.402 Sum_probs=72.7
Q ss_pred CceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcccccccccccC
Q 038182 124 GLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFS 202 (245)
Q Consensus 124 ~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~ 202 (245)
.+++|+++|.||||+|++.|++||||+++||+|. |.. | .+. ++.|||++|+||+..
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~--c-~~~----~~~y~~~~SsT~~~~---------------- 69 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTN--C-GSG----QTKYDPNQSSTYQAD---------------- 69 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSS--C-CTT----SCCBCGGGCTTCEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCch--H-hcC----CCCCCcccCCCeeeC----------------
Confidence 4489999999999999999999999999999999 865 6 222 468999999998762
Q ss_pred CCCCCCCCCCCcEEEEecCCce-EEEEEEEEEEECcc
Q 038182 203 LSMCPTPVTPCAYDYRFVYKYA-SGIIFFNILCIKKM 238 (245)
Q Consensus 203 ~~~C~~~~~~C~y~~~Ygdgs~-~G~l~~D~v~l~~~ 238 (245)
.|.|.+.|+||+. .|.+++|+|+|++.
T Consensus 70 ---------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~ 97 (325)
T 2apr_A 70 ---------GRTWSISYGDGSSASGILAKDNVNLGGL 97 (325)
T ss_dssp ---------EEEEEEECTTSCEEEEEEEEEEEEETTE
T ss_pred ---------CCEEEEEECCCCCEEEEEEEEEEEECCE
Confidence 3899999999996 99999999999853
No 15
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=99.76 E-value=1.2e-18 Score=157.22 Aligned_cols=84 Identities=23% Similarity=0.376 Sum_probs=73.3
Q ss_pred CceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcccccccccccC
Q 038182 124 GLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFS 202 (245)
Q Consensus 124 ~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~ 202 (245)
.+++|+++|.||||+|++.|++||||+++||+|. |.. |..+. ++.|||++|+||+.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~--~~~~~----~~~y~~~~SsT~~~~~--------------- 71 (329)
T 3c9x_A 13 ADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPK--SSATG----HAIYTPSKSSTSKKVS--------------- 71 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCH--HHHTT----SCCBCGGGCTTCEECT---------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCc--cccCC----CCcCCcccCcCceEcC---------------
Confidence 4589999999999999999999999999999999 865 53322 3689999999998763
Q ss_pred CCCCCCCCCCCcEEEEecCCce-EEEEEEEEEEECc
Q 038182 203 LSMCPTPVTPCAYDYRFVYKYA-SGIIFFNILCIKK 237 (245)
Q Consensus 203 ~~~C~~~~~~C~y~~~Ygdgs~-~G~l~~D~v~l~~ 237 (245)
.|.|.+.||||+. .|.+++|+|+|++
T Consensus 72 ---------~~~~~i~Yg~Gs~~~G~~~~D~v~ig~ 98 (329)
T 3c9x_A 72 ---------GASWSISYGDGSSSSGDVYTDKVTIGG 98 (329)
T ss_dssp ---------TCBEEEECTTSCEEEEEEEEEEEEETT
T ss_pred ---------CCeEEEEeCCCCcEEEEEEEEEEEECC
Confidence 3899999999996 9999999999986
No 16
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=99.76 E-value=5.5e-19 Score=159.10 Aligned_cols=88 Identities=24% Similarity=0.480 Sum_probs=76.6
Q ss_pred eeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCccc
Q 038182 115 IPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTC 193 (245)
Q Consensus 115 ~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C 193 (245)
+||+ . .+++|+++|.||||+|++.|++||||+++||+|. |....|..+ +.|||++|+||+..
T Consensus 5 ~~l~-~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~------~~y~~~~SsT~~~~------- 67 (329)
T 1htr_B 5 EPMA-Y---MDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSH------SRFNPSESSTYSTN------- 67 (329)
T ss_dssp CGGG-G---TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS------CCBCGGGCTTCEEE-------
T ss_pred eeeE-E---cCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCC------CcCCCccCCCeEEC-------
Confidence 5676 2 3489999999999999999999999999999999 864457653 57999999998764
Q ss_pred ccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 194 KVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 194 ~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.|+||+..|.+++|+|+|++
T Consensus 68 ------------------~~~~~i~Yg~gs~~G~~~~D~v~~g~ 93 (329)
T 1htr_B 68 ------------------GQTFSLQYGSGSLTGFFGYDTLTVQS 93 (329)
T ss_dssp ------------------EEEEEEEETTEEEEEEEEEEEEEETT
T ss_pred ------------------CcEEEEEeCCCCeEEEEEeeeEEEcc
Confidence 28999999999889999999999975
No 17
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=99.76 E-value=2.5e-18 Score=155.12 Aligned_cols=89 Identities=25% Similarity=0.418 Sum_probs=77.8
Q ss_pred eeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeee-----cC-CCCCCCCCCCCCCCCCCCCCCCCCcceec
Q 038182 113 VKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMH-----CN-HKGENCPKDGLTPPNRMFHADASSTFKTI 186 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~-----C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v 186 (245)
+.+||.++. ++|+++|.||||||++.|++||||+++||+ |. |. .|..+ +.|||++|+||+..
T Consensus 3 i~~~l~~~~----~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~--~C~~~------~~y~~~~SsT~~~~ 70 (339)
T 3fv3_A 3 ISLSLINEG----PSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV--DCKSS------GTFTPSSSSSYKNL 70 (339)
T ss_dssp EEEEEEECS----SSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC--CTTTT------CCBCGGGCTTCEEE
T ss_pred eeeEEEcCC----CEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC--CCCCC------CcCCCccCcceeeC
Confidence 678998876 799999999999999999999999999998 65 43 38753 68999999999875
Q ss_pred cCCCcccccccccccCCCCCCCCCCCCcEEEEecCCce-EEEEEEEEEEECcc
Q 038182 187 PCSSRTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYA-SGIIFFNILCIKKM 238 (245)
Q Consensus 187 ~C~s~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~-~G~l~~D~v~l~~~ 238 (245)
. |.|.+.||||+. .|.+++|+|+|++.
T Consensus 71 ~-------------------------~~~~i~Yg~gs~~~G~~~~D~v~~g~~ 98 (339)
T 3fv3_A 71 G-------------------------AAFTIRYGDGSTSQGTWGKDTVTINGV 98 (339)
T ss_dssp E-------------------------EEEEEECTTSCEEEEEEEEEEEEETTE
T ss_pred C-------------------------ceEEEEECCCceEEEEEEEEEEEECCE
Confidence 2 899999999976 99999999999863
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=99.76 E-value=1.7e-18 Score=156.25 Aligned_cols=83 Identities=18% Similarity=0.323 Sum_probs=72.8
Q ss_pred CceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcccccccccccC
Q 038182 124 GLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFS 202 (245)
Q Consensus 124 ~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~ 202 (245)
.+++|+++|.||||+|++.|++||||+++||+|. |.. |.. . ++.|||++|+||+.+.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~--~~~-~----~~~y~~~~SsT~~~~~--------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTA--SEV-X----QTIYTPSKSTTAKLLS--------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCG--GGC------CCCBCGGGCTTCEEEE---------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCc--ccc-c----cCccCCccCccceecC---------------
Confidence 4479999999999999999999999999999999 865 432 1 3689999999998763
Q ss_pred CCCCCCCCCCCcEEEEecCCce-EEEEEEEEEEECc
Q 038182 203 LSMCPTPVTPCAYDYRFVYKYA-SGIIFFNILCIKK 237 (245)
Q Consensus 203 ~~~C~~~~~~C~y~~~Ygdgs~-~G~l~~D~v~l~~ 237 (245)
.|.|.+.||||+. .|.+++|+|+|++
T Consensus 71 ---------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~ 97 (329)
T 1oew_A 71 ---------GATWSISYGDGSSSSGDVYTDTVSVGG 97 (329)
T ss_dssp ---------EEEEEEECTTSCEEEEEEEEEEEEETT
T ss_pred ---------CCeEEEEeCCCCcEEEEEEEEEEEECC
Confidence 2899999999996 9999999999986
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=99.76 E-value=1.4e-18 Score=159.94 Aligned_cols=91 Identities=20% Similarity=0.314 Sum_probs=79.5
Q ss_pred eeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCc
Q 038182 113 VKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSR 191 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~ 191 (245)
..+||.+. .+++|+++|.||||||++.|+|||||+++||+|. |....|..+ +.|||++|+||+..
T Consensus 52 ~~~pl~~~---~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~------~~y~~~~SsT~~~~----- 117 (375)
T 1miq_A 52 DVIELDDV---ANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIK------NLYDSSKSKSYEKD----- 117 (375)
T ss_dssp BCCCGGGT---BCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGS------CCBCGGGCTTCEEE-----
T ss_pred ceEEcccC---CCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCC------CcCCCccCCceEEC-----
Confidence 45788753 4589999999999999999999999999999999 975568654 58999999998764
Q ss_pred ccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 192 TCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 192 ~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.||||+..|.+++|+|+|++
T Consensus 118 --------------------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~ 143 (375)
T 1miq_A 118 --------------------GTKVDITYGSGTVKGFFSKDLVTLGH 143 (375)
T ss_dssp --------------------EEEEEEEETTEEEEEEEEEEEEEETT
T ss_pred --------------------CcEEEEEeCCCeEEEEEEEEEEEEcC
Confidence 28999999999999999999999985
No 20
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=99.75 E-value=2.1e-18 Score=159.69 Aligned_cols=105 Identities=18% Similarity=0.351 Sum_probs=83.4
Q ss_pred ceeeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecCCCCCCCCCCCCCCCCCCCCCCCCCcceeccCCC
Q 038182 111 NIVKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCNHKGENCPKDGLTPPNRMFHADASSTFKTIPCSS 190 (245)
Q Consensus 111 ~~~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s 190 (245)
+.+.+||+.. +.+++|+++|.||||||++.|+|||||+++||+|.. | .+|+||+.++|.+
T Consensus 8 ~~~~~pl~~~--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~----~--------------~~Sst~~~~~C~s 67 (403)
T 3aup_A 8 NLVVLPVQND--GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQ----Q--------------YSSKTYQAPFCHS 67 (403)
T ss_dssp CCEEEEEEEC--TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSS----C--------------CCCSSCBCCCTTB
T ss_pred ccEEEeeecC--CCCceEEEEEECCCCCceeEEEEECCCCceeECCCC----C--------------CCCCCCCccCCCC
Confidence 4567899853 256899999999999999999999999999999971 2 2689999999999
Q ss_pred ccccccccccc------CCCCCCCCCCCCcEEEEec-CCce-EEEEEEEEEEECc
Q 038182 191 RTCKVDLQDTF------SLSMCPTPVTPCAYDYRFV-YKYA-SGIIFFNILCIKK 237 (245)
Q Consensus 191 ~~C~~~~~~~~------~~~~C~~~~~~C~y~~~Yg-dgs~-~G~l~~D~v~l~~ 237 (245)
+.|.....-.+ ....|. ++.|.|.+.|+ ||+. .|++++|+|+|++
T Consensus 68 ~~C~~~~~~~c~~c~~~~~s~~~--~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~ 120 (403)
T 3aup_A 68 TQCSRANTHQCLSCPAASRPGCH--KNTCGLMSTNPITQQTGLGELGEDVLAIHA 120 (403)
T ss_dssp HHHHHTTCCCEEECSSSCBTTBC--SSEEEEEEEETTTTEEEEEEEEEEEEEEEE
T ss_pred ccccCccccCccccCCCCCCCCC--CCcceeEeecCCCCceeeEEEEEEEEEecc
Confidence 99986432000 012353 24799999998 7877 9999999999976
No 21
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=99.75 E-value=2.5e-18 Score=155.21 Aligned_cols=91 Identities=20% Similarity=0.277 Sum_probs=77.0
Q ss_pred eeeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC---CCC-------CCCCCCCCCCCCCCCCCCCCC
Q 038182 112 IVKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN---HKG-------ENCPKDGLTPPNRMFHADASS 181 (245)
Q Consensus 112 ~~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~---C~~-------~~C~~~~~~~~~~~fdps~Ss 181 (245)
.+.+||.++. .+|+++|.||||+|++.|+|||||+++||+|. |.. ..|.. ++.|||++|+
T Consensus 2 ~~~~~l~~~~----~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~------~~~y~~~~Ss 71 (334)
T 1j71_A 2 DVPTTLINEG----PSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQ------EGTFDPSSSS 71 (334)
T ss_dssp CEEEEEEECS----SSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGS------SCCBCGGGCT
T ss_pred ceeEEEecCC----cEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccC------CCcCCcccCC
Confidence 3678888764 89999999999999999999999999999864 532 13543 3689999999
Q ss_pred cceeccCCCcccccccccccCCCCCCCCCCCCcEEEEecCCce-EEEEEEEEEEECc
Q 038182 182 TFKTIPCSSRTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYA-SGIIFFNILCIKK 237 (245)
Q Consensus 182 T~~~v~C~s~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~-~G~l~~D~v~l~~ 237 (245)
||+.. .|.|.+.|+||+. .|.+++|+|+|++
T Consensus 72 T~~~~-------------------------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~ 103 (334)
T 1j71_A 72 SAQNL-------------------------NQDFSIEYGDLTSSQGSFYKDTVGFGG 103 (334)
T ss_dssp TCEEE-------------------------EEEEEEEBTTSCEEEEEEEEEEEEETT
T ss_pred CcccC-------------------------CCceEEEECCCCEEEEEEEEEEEEECC
Confidence 99864 3899999999997 9999999999986
No 22
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=99.74 E-value=3.8e-18 Score=154.38 Aligned_cols=90 Identities=23% Similarity=0.349 Sum_probs=76.2
Q ss_pred eeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC---CCC-------CCCCCCCCCCCCCCCCCCCCCc
Q 038182 113 VKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN---HKG-------ENCPKDGLTPPNRMFHADASST 182 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~---C~~-------~~C~~~~~~~~~~~fdps~SsT 182 (245)
+.+||.++. ++|+++|.||||+|++.|+|||||+++||+|. |.. ..|.. ++.|||++|+|
T Consensus 3 v~~~l~~~~----~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~------~~~y~~~~SsT 72 (342)
T 2qzx_A 3 VAVTLHNEA----ITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKS------AGSYSPASSRT 72 (342)
T ss_dssp EEEEEEECS----SCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGT------TCCBCGGGCTT
T ss_pred eeEEEecCC----eEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccC------CCcCCcccCCC
Confidence 567888754 89999999999999999999999999999854 532 13443 36899999999
Q ss_pred ceeccCCCcccccccccccCCCCCCCCCCCCcEEEEecCCce-EEEEEEEEEEECc
Q 038182 183 FKTIPCSSRTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYA-SGIIFFNILCIKK 237 (245)
Q Consensus 183 ~~~v~C~s~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~-~G~l~~D~v~l~~ 237 (245)
|+.. .|.|.+.||||+. .|.+++|+|+|++
T Consensus 73 ~~~~-------------------------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~ 103 (342)
T 2qzx_A 73 SQNL-------------------------NTRFDIKYGDGSYAKGKLYKDTVGIGG 103 (342)
T ss_dssp CEEE-------------------------EEEEEEECTTSCEEEEEEEEEEEEETT
T ss_pred cccC-------------------------CCcEEEEeCCCCeEEEEEEEEEEEECC
Confidence 9865 2899999999997 9999999999986
No 23
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=99.73 E-value=3.6e-18 Score=161.08 Aligned_cols=93 Identities=19% Similarity=0.264 Sum_probs=80.1
Q ss_pred eeeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCC
Q 038182 112 IVKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSS 190 (245)
Q Consensus 112 ~~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s 190 (245)
...+||.+. .+.+|+++|.||||||++.|++||||+++||+|. |....|..+ +.|||++|+||+..
T Consensus 126 ~~~~pL~n~---~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~------~~ydps~SsT~~~~---- 192 (451)
T 3qvc_A 126 FDNVELKDL---ANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESK------NHYDSSKSKTYEKD---- 192 (451)
T ss_dssp -CCCCGGGG---BCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTS------CCBCGGGCTTCEEE----
T ss_pred CCccceeec---CCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCC------CCCCCCCCcccccC----
Confidence 345688754 3589999999999999999999999999999999 965568654 58999999999763
Q ss_pred cccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECcc
Q 038182 191 RTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKM 238 (245)
Q Consensus 191 ~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~~ 238 (245)
.|.|.+.||||+..|.+++|+|+|++.
T Consensus 193 ---------------------~~~f~i~YgdGs~~G~~~~Dtv~igg~ 219 (451)
T 3qvc_A 193 ---------------------DTPVKLTSKAGTISGIFSKDLVTIGKL 219 (451)
T ss_dssp ---------------------EEEEEEECSSEEEEEEEEEEEEEETTE
T ss_pred ---------------------CCEEEEEECCCEEEEEEEEEEEEECCE
Confidence 389999999999999999999999863
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=99.73 E-value=1.1e-17 Score=150.83 Aligned_cols=90 Identities=20% Similarity=0.331 Sum_probs=76.1
Q ss_pred eeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC---CCC-------CCCCCCCCCCCCCCCCCCCCCc
Q 038182 113 VKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN---HKG-------ENCPKDGLTPPNRMFHADASST 182 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~---C~~-------~~C~~~~~~~~~~~fdps~SsT 182 (245)
+.+|+.++. ++|+++|.||||||++.|++||||+++||+|. |.. ..|.. ++.|||++|+|
T Consensus 3 v~~~l~~~~----~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~------~~~y~~~~SsT 72 (342)
T 3pvk_A 3 VPVTLHNEQ----VTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQ------KGTYDPSGSSA 72 (342)
T ss_dssp EEEEEEECS----SSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGT------TCCBCGGGCTT
T ss_pred cceEEecCC----cEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCC------CCcCCCccCcc
Confidence 567787765 89999999999999999999999999999854 421 23543 36899999999
Q ss_pred ceeccCCCcccccccccccCCCCCCCCCCCCcEEEEecCCce-EEEEEEEEEEECc
Q 038182 183 FKTIPCSSRTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYA-SGIIFFNILCIKK 237 (245)
Q Consensus 183 ~~~v~C~s~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~-~G~l~~D~v~l~~ 237 (245)
|+... |.|.+.|+||+. .|.+++|+|+|++
T Consensus 73 ~~~~~-------------------------~~~~i~Yg~gs~~~G~~~~D~v~ig~ 103 (342)
T 3pvk_A 73 SQDLN-------------------------TPFKIGYGDGSSSQGTLYKDTVGFGG 103 (342)
T ss_dssp CEEEE-------------------------EEEEEECSSSCEEEEEEEEEEEEETT
T ss_pred eeecC-------------------------CeEEEEecCCCeEEEEEEEEEEEECC
Confidence 98752 899999999996 9999999999986
No 25
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=99.73 E-value=9.8e-18 Score=153.75 Aligned_cols=77 Identities=23% Similarity=0.402 Sum_probs=69.3
Q ss_pred eeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcccccccccccCCC
Q 038182 126 GQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFSLS 204 (245)
Q Consensus 126 ~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~ 204 (245)
..|+++|.||||+|++.|+|||||+++||+|. |.. |. +.|||++|+||+..
T Consensus 13 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~--~~--------~~f~~~~SsT~~~~------------------ 64 (383)
T 2ewy_A 13 RGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSY--ID--------TYFDTERSSTYRSK------------------ 64 (383)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTT--BS--------CCCCGGGCTTCEEE------------------
T ss_pred CcEEEEEEecCCCceEEEEEecCCCceEEecCCCCc--cc--------cCcccccCccceeC------------------
Confidence 57999999999999999999999999999998 743 42 47999999999875
Q ss_pred CCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 205 MCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 205 ~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.||||+..|++++|+|+|++
T Consensus 65 -------~~~~~i~Yg~Gs~~G~~~~Dtv~i~~ 90 (383)
T 2ewy_A 65 -------GFDVTVKYTQGSWTGFVGEDLVTIPK 90 (383)
T ss_dssp -------EEEEEEECSSCEEEEEEEEEEEEETT
T ss_pred -------CceEEEEECCcEEEEEEEEEEEEECC
Confidence 28899999999889999999999975
No 26
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=99.72 E-value=8.4e-18 Score=159.55 Aligned_cols=92 Identities=27% Similarity=0.366 Sum_probs=78.3
Q ss_pred eeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CC-CCCCCCCCCCCCCCCCCCCCCCcceeccCCC
Q 038182 113 VKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HK-GENCPKDGLTPPNRMFHADASSTFKTIPCSS 190 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~-~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s 190 (245)
..+||.+. .+++|+++|.||||||++.|+|||||+++||+|. |. ...|..+ +.|||++|+||+..
T Consensus 42 ~~~~l~n~---~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~------~~y~~~~SsT~~~~---- 108 (478)
T 1qdm_A 42 DIVALKNY---MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLH------SRYKAGASSTYKKN---- 108 (478)
T ss_dssp CSGGGCCG---GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGS------CCBCGGGCTTCBCC----
T ss_pred ceEEeEec---cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCC------CCCCcccCCCeeeC----
Confidence 34677753 4589999999999999999999999999999999 85 2358764 57999999998653
Q ss_pred cccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECcc
Q 038182 191 RTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKM 238 (245)
Q Consensus 191 ~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~~ 238 (245)
.|.|.+.||+|+..|++++|+|+|++.
T Consensus 109 ---------------------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~ 135 (478)
T 1qdm_A 109 ---------------------GKPAAIQYGTGSIAGYFSEDSVTVGDL 135 (478)
T ss_dssp ---------------------CCEEEEEETTEEEEEEEEEEEEEETTE
T ss_pred ---------------------CcEEEEEcCCCCeEEEEEEEEEEECCe
Confidence 388999999998899999999999863
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=99.71 E-value=2.1e-17 Score=152.43 Aligned_cols=77 Identities=25% Similarity=0.369 Sum_probs=69.1
Q ss_pred eeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcccccccccccCCC
Q 038182 126 GQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFSLS 204 (245)
Q Consensus 126 ~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~ 204 (245)
.+|+++|.||||+|++.|+|||||+++||+|. |.. | ++.|||++|+||+..
T Consensus 21 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~--~--------~~~y~~~~SsT~~~~------------------ 72 (395)
T 2qp8_A 21 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF--L--------HRYYQRQLSSTYRDL------------------ 72 (395)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTT--C--------SCCCCGGGCTTCEEE------------------
T ss_pred ceEEEEEEecCCCceEEEEEecCCCceEEECCCCcc--c--------cCCcCcccCCCceeC------------------
Confidence 68999999999999999999999999999998 642 3 257999999999875
Q ss_pred CCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 205 MCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 205 ~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.|+||+..|.+++|+|+|++
T Consensus 73 -------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~ 98 (395)
T 2qp8_A 73 -------RKGVYVPYTQGKWEGELGTDLVSIPH 98 (395)
T ss_dssp -------EEEEEEECSSCEEEEEEEEEEEECTT
T ss_pred -------CceEEEEECCcEEEEEEEeEEEEECC
Confidence 28899999999889999999999974
No 28
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=99.70 E-value=2.9e-17 Score=151.64 Aligned_cols=77 Identities=25% Similarity=0.361 Sum_probs=69.5
Q ss_pred eeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcccccccccccCCC
Q 038182 126 GQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFSLS 204 (245)
Q Consensus 126 ~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~ 204 (245)
.+|+++|.||||||++.|+|||||+++||+|. | |.. ++.|||++|+||+..
T Consensus 28 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c----~~~------~~~y~~~~SsT~~~~------------------ 79 (402)
T 3vf3_A 28 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH----PFL------HRYYQRQLSSTYRDL------------------ 79 (402)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC----TTC------SCCCCGGGCTTCEEE------------------
T ss_pred CEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC----Ccc------cCCcCcccCcccccC------------------
Confidence 58999999999999999999999999999998 6 433 358999999999875
Q ss_pred CCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 205 MCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 205 ~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.|++|+..|.+++|+|+|++
T Consensus 80 -------~~~~~i~Yg~Gs~~G~~~~D~v~ig~ 105 (402)
T 3vf3_A 80 -------RKGVYVPYTQGKWEGELGTDLVSIPH 105 (402)
T ss_dssp -------EEEEEEECSSCEEEEEEEEEEEECTT
T ss_pred -------CCEEEEEECcEEEEEEEEEEEEEECC
Confidence 28999999999999999999999984
No 29
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=99.69 E-value=5e-17 Score=152.76 Aligned_cols=77 Identities=25% Similarity=0.361 Sum_probs=69.6
Q ss_pred eeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcccccccccccCCC
Q 038182 126 GQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFSLS 204 (245)
Q Consensus 126 ~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~~ 204 (245)
.+|+++|.||||||++.|+|||||+++||+|. | |.. ++.|||++|+||+..
T Consensus 74 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c----c~~------~~~y~~~~SsT~~~~------------------ 125 (455)
T 3lpj_A 74 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH----PFL------HRYYQRQLSSTYRDL------------------ 125 (455)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC----TTC------SCCCCGGGCTTCEEE------------------
T ss_pred CEEEEEEEECCCCeEEEEEEcCCCcceEEecccc----ccc------CCcccCCCCCCcccC------------------
Confidence 58999999999999999999999999999999 6 433 358999999999875
Q ss_pred CCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 205 MCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 205 ~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
.|.|.+.||||+..|.+++|+|+|++
T Consensus 126 -------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~ 151 (455)
T 3lpj_A 126 -------RKGVYVPYTQGKWEGELGTDLVSIPH 151 (455)
T ss_dssp -------EEEEEEECSSCEEEEEEEEEEEECTT
T ss_pred -------CccEEEEeCCeEEEEEEEEEEEEECC
Confidence 28999999999999999999999984
No 30
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=99.65 E-value=5e-16 Score=140.33 Aligned_cols=78 Identities=23% Similarity=0.410 Sum_probs=68.0
Q ss_pred eeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecCCCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCccc
Q 038182 114 KIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCNHKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTC 193 (245)
Q Consensus 114 ~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C 193 (245)
.+||.+.. .+|+++|.||||+|++.|+|||||+++||+|. +.|||++|+++
T Consensus 4 ~~~l~n~~----~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~---------- 54 (340)
T 1wkr_A 4 SVPATNQL----VDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSA---------- 54 (340)
T ss_dssp EEEEEECS----SCEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEE----------
T ss_pred cEeeeccC----cEEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCccc----------
Confidence 57888754 69999999999999999999999999999874 25999888753
Q ss_pred ccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECc
Q 038182 194 KVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKK 237 (245)
Q Consensus 194 ~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~ 237 (245)
..|.|.+.||||+..|.+++|+|+|++
T Consensus 55 -----------------~~~~~~i~Yg~Gs~~G~~~~Dtv~~g~ 81 (340)
T 1wkr_A 55 -----------------TSDKVSVTYGSGSFSGTEYTDTVTLGS 81 (340)
T ss_dssp -----------------EEEEEEEECSSCEEEEEEEEEEEEETT
T ss_pred -----------------cCceEEEEECCcEEEEEEEEEEEEECC
Confidence 138999999999889999999999986
No 31
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=99.64 E-value=2.6e-16 Score=141.96 Aligned_cols=90 Identities=17% Similarity=0.086 Sum_probs=75.9
Q ss_pred eeeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCC--CCCCCCCCCCCCCCCCCCcceeccC
Q 038182 112 IVKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENC--PKDGLTPPNRMFHADASSTFKTIPC 188 (245)
Q Consensus 112 ~~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C--~~~~~~~~~~~fdps~SsT~~~v~C 188 (245)
++..||.+. .+.+|+++|.|| +|++.|++||||+++||+|. |....| .. ++.|||++| ||+..
T Consensus 6 ~~~~~l~n~---~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~------~~~y~~~~S-T~~~~-- 71 (330)
T 1yg9_A 6 PLYKLVHVF---INTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPN------LQKYEKLKP-KYISD-- 71 (330)
T ss_dssp CSCSCEEEE---ECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTT------CCCCCCSSC-EEEEE--
T ss_pred eeEeeeecC---CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccc------cCccCCCCC-ceEEC--
Confidence 345677753 347899999999 99999999999999999999 974468 44 368999999 98764
Q ss_pred CCcccccccccccCCCCCCCCCCCCcEEEEecCCceEEEEEEEEEEECcc
Q 038182 189 SSRTCKVDLQDTFSLSMCPTPVTPCAYDYRFVYKYASGIIFFNILCIKKM 238 (245)
Q Consensus 189 ~s~~C~~~~~~~~~~~~C~~~~~~C~y~~~Ygdgs~~G~l~~D~v~l~~~ 238 (245)
.|.|.+.||||+..|.+++|+|+|++.
T Consensus 72 -----------------------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~ 98 (330)
T 1yg9_A 72 -----------------------GNVQVKFFDTGSAVGRGIEDSLTISQL 98 (330)
T ss_dssp -----------------------EEEEEEETTTEEEEEEEEEEEEEETTE
T ss_pred -----------------------CCEEEEEECCceEEEEEEEEEEEECCE
Confidence 278999999998899999999999863
No 32
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=99.60 E-value=2e-15 Score=135.75 Aligned_cols=80 Identities=18% Similarity=0.317 Sum_probs=67.3
Q ss_pred CceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcccccccccccC
Q 038182 124 GLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFS 202 (245)
Q Consensus 124 ~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~ 202 (245)
.+++|+++|.|| +|++.|++||||+++||+|. |....|.. ++.|||++|+ ++ +
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~------~~~y~~~~Ss-~~-~---------------- 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTG------HDLYTPSSSA-TK-L---------------- 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTT------SCCCBCCSSC-EE-C----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCC------CCCCCchhcC-Cc-c----------------
Confidence 347999999999 99999999999999999999 86522333 3689999998 43 1
Q ss_pred CCCCCCCCCCCcEEEEecCCce-EEEEEEEEEEECc
Q 038182 203 LSMCPTPVTPCAYDYRFVYKYA-SGIIFFNILCIKK 237 (245)
Q Consensus 203 ~~~C~~~~~~C~y~~~Ygdgs~-~G~l~~D~v~l~~ 237 (245)
+.|.|.+.||||+. .|.+++|+|+|++
T Consensus 66 --------~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~ 93 (325)
T 1ibq_A 66 --------SGYSWDISYGDGSSASGDVYRDTVTVGG 93 (325)
T ss_dssp --------TTCBEEEECSSSCEEEEEEEEEEEEETT
T ss_pred --------CCCEEEEEeCCCCEEEEEEEEeEEEECC
Confidence 14899999999996 9999999999985
No 33
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=99.60 E-value=1.6e-15 Score=136.50 Aligned_cols=80 Identities=16% Similarity=0.244 Sum_probs=67.3
Q ss_pred ceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcccccccccccCC
Q 038182 125 LGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFSL 203 (245)
Q Consensus 125 ~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~ 203 (245)
+.+|+++|.|| ||++.|+|||||+++||+|. |....|.. ++.|||++|+ ++.-
T Consensus 14 ~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~------~~~y~~~~Ss-~~~~----------------- 67 (323)
T 1izd_A 14 DEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSG------HDYYTPGSSA-QKID----------------- 67 (323)
T ss_dssp GCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTT------CCCBCCCTTC-EEEE-----------------
T ss_pred CCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccC------CCCCCccccC-CccC-----------------
Confidence 47999999999 89999999999999999999 86522433 3689999998 4321
Q ss_pred CCCCCCCCCCcEEEEecCCce-EEEEEEEEEEECcc
Q 038182 204 SMCPTPVTPCAYDYRFVYKYA-SGIIFFNILCIKKM 238 (245)
Q Consensus 204 ~~C~~~~~~C~y~~~Ygdgs~-~G~l~~D~v~l~~~ 238 (245)
.|.|.+.||||+. .|.+++|+|+|++.
T Consensus 68 --------~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~ 95 (323)
T 1izd_A 68 --------GATWSISYGDGSSASGDVYKDKVTVGGV 95 (323)
T ss_dssp --------EEEEEEECTTSCEEEEEEEEEEEEETTE
T ss_pred --------CCeEEEEcCCCCeEEEEEEEEEEEECCE
Confidence 3899999999996 99999999999853
No 34
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=99.58 E-value=1e-15 Score=137.63 Aligned_cols=80 Identities=15% Similarity=0.258 Sum_probs=67.4
Q ss_pred ceeEEEEEEeCCCCceEEEEEeCCCCceeeecC-CCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcccccccccccCC
Q 038182 125 LGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN-HKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRTCKVDLQDTFSL 203 (245)
Q Consensus 125 ~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~-C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~C~~~~~~~~~~ 203 (245)
+.+|+++|.|| ||++.|+|||||+++||+|. |....|.. ++.|||++|+ ++.-
T Consensus 14 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~------~~~y~~~~Ss-~~~~----------------- 67 (323)
T 1bxo_A 14 DEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSG------HSVYNPSATG-KELS----------------- 67 (323)
T ss_dssp GSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTT------SCCBCHHHHC-EEEE-----------------
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccC------CCCCCcccCC-cccC-----------------
Confidence 47999999999 99999999999999999999 86522333 3689999988 5321
Q ss_pred CCCCCCCCCCcEEEEecCCce-EEEEEEEEEEECcc
Q 038182 204 SMCPTPVTPCAYDYRFVYKYA-SGIIFFNILCIKKM 238 (245)
Q Consensus 204 ~~C~~~~~~C~y~~~Ygdgs~-~G~l~~D~v~l~~~ 238 (245)
.|.|.+.||||+. .|.+++|+|+|++.
T Consensus 68 --------~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~ 95 (323)
T 1bxo_A 68 --------GYTWSISYGDGSSASGNVFTDSVTVGGV 95 (323)
T ss_dssp --------EEEEEEECTTSCEEEEEEEEEEEEETTE
T ss_pred --------CCeEEEEeCCCCeEEEEEEEEEEEECCE
Confidence 3899999999996 99999999999863
No 35
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=99.57 E-value=1.6e-15 Score=139.36 Aligned_cols=95 Identities=28% Similarity=0.570 Sum_probs=72.4
Q ss_pred eeeeeeeCCCCCceeEEEEEEeCCCCceEEEEEeCCCCceeeecCCCCCCCCCCCCCCCCCCCCCCCCCcceeccCCCcc
Q 038182 113 VKIPLRSGADRGLGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCNHKGENCPKDGLTPPNRMFHADASSTFKTIPCSSRT 192 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~C~~~~C~~~~~~~~~~~fdps~SsT~~~v~C~s~~ 192 (245)
+.+||+.. ..+++|+++|.|||| |+|||||+++||+|.+ |+ +|+.++|.++.
T Consensus 3 ~~~pv~~~--~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~----~~-----------------~~~~~~C~s~~ 54 (381)
T 1t6e_X 3 VLAPVTKD--PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDG----GQ-----------------PPAEIPCSSPT 54 (381)
T ss_dssp EEEEEEEC--TTTCCEEEEEETTEE-----EEEETTCCCEEECCCT----TC-----------------CCCCCBTTSHH
T ss_pred eEEeEEec--CCCcEEEEEEeCCCE-----EEEECCCCceEEeCCC----CC-----------------CCCccCCCCch
Confidence 56788753 356899999999998 9999999999999971 21 24567899999
Q ss_pred cccccccccCCCCCCCC-------CCCC-cEEEEecCCce-EEEEEEEEEEECc
Q 038182 193 CKVDLQDTFSLSMCPTP-------VTPC-AYDYRFVYKYA-SGIIFFNILCIKK 237 (245)
Q Consensus 193 C~~~~~~~~~~~~C~~~-------~~~C-~y~~~Ygdgs~-~G~l~~D~v~l~~ 237 (245)
|..... ++...|... ++.| .|.+.||||+. .|++++|+|+|++
T Consensus 55 C~~~~~--~~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~ 106 (381)
T 1t6e_X 55 CLLANA--YPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANT 106 (381)
T ss_dssp HHHHHS--SCCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEE
T ss_pred hccccC--CCCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeec
Confidence 975321 222356531 2468 49999999998 9999999999974
No 36
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=74.26 E-value=3 Score=31.72 Aligned_cols=29 Identities=28% Similarity=0.439 Sum_probs=23.7
Q ss_pred EEEEEeC---CCCceEEEEEeCCCCceeeecC
Q 038182 129 FVSFRVG---SPPQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 129 ~v~i~iG---TPpq~~~vilDTGSdl~Wv~C~ 157 (245)
.++|.|| +|+|.+...+|||-|.+-+.-.
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 4556665 8899999999999999888754
No 37
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=73.83 E-value=3.8 Score=30.40 Aligned_cols=28 Identities=14% Similarity=0.203 Sum_probs=23.3
Q ss_pred eEEEEEEeCCCCceEEEEEeCCCCceeeec
Q 038182 127 QYFVSFRVGSPPQKFVLIADTGSDLTWMHC 156 (245)
Q Consensus 127 ~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C 156 (245)
.-++++.|| .|.+.+.+|||.|.+-+.-
T Consensus 8 RP~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 8 RPTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CCEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 346788898 5899999999999998873
No 38
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=73.23 E-value=3.4 Score=30.46 Aligned_cols=27 Identities=30% Similarity=0.342 Sum_probs=22.4
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCceeeec
Q 038182 128 YFVSFRVGSPPQKFVLIADTGSDLTWMHC 156 (245)
Q Consensus 128 Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C 156 (245)
=++++.|| .|.+.+.+|||.|.+-+.-
T Consensus 9 P~vtvkI~--Gq~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 9 PLVTIKIG--GQLKEALLDTGADDTIIEE 35 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSEEESC
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEec
Confidence 36778898 4999999999999987753
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=66.07 E-value=6.2 Score=30.22 Aligned_cols=31 Identities=16% Similarity=0.296 Sum_probs=25.9
Q ss_pred ceeEEEEEEeCCCCceEEEEEeCCCCceeeecC
Q 038182 125 LGQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 125 ~~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~ 157 (245)
.+.|++.+.|+ .+++.+++|||++.+-+.-.
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCHH
Confidence 36789999997 47999999999998877654
No 40
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=65.58 E-value=6 Score=29.15 Aligned_cols=26 Identities=23% Similarity=0.236 Sum_probs=21.8
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCceeee
Q 038182 128 YFVSFRVGSPPQKFVLIADTGSDLTWMH 155 (245)
Q Consensus 128 Y~v~i~iGTPpq~~~vilDTGSdl~Wv~ 155 (245)
-++++.|| .|.+.+.+|||.|.+-+.
T Consensus 9 P~vti~I~--Gq~~e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 9 PVVTAYIE--GQPVEVLLDTGADDSIVA 34 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEES
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEc
Confidence 36778888 489999999999998774
No 41
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=58.12 E-value=11 Score=28.58 Aligned_cols=27 Identities=22% Similarity=0.311 Sum_probs=21.9
Q ss_pred EEEEEEeCCCCceEEEEEeCCCCceeeecC
Q 038182 128 YFVSFRVGSPPQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 128 Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~ 157 (245)
=++ +.|| .|.+.+.+|||.|.+-+.-.
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 345 8888 58999999999999877643
No 42
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=51.06 E-value=18 Score=27.26 Aligned_cols=27 Identities=19% Similarity=0.358 Sum_probs=22.2
Q ss_pred EEEEEeCCCCceEEEEEeCCCCceeeecC
Q 038182 129 FVSFRVGSPPQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 129 ~v~i~iGTPpq~~~vilDTGSdl~Wv~C~ 157 (245)
.+++.|| .|.+.+++|||-|.+-+.-.
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecc
Confidence 5678888 49999999999999877654
No 43
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=47.72 E-value=18 Score=28.07 Aligned_cols=30 Identities=17% Similarity=0.352 Sum_probs=25.8
Q ss_pred eeEEEEEEeCCCCceEEEEEeCCCCceeeecC
Q 038182 126 GQYFVSFRVGSPPQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 126 ~~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C~ 157 (245)
..|++++.|+ .+++.+++|||++.+-+.-.
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 5788999997 58999999999999888766
No 44
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=43.96 E-value=28 Score=30.07 Aligned_cols=41 Identities=27% Similarity=0.399 Sum_probs=29.0
Q ss_pred eeeeeeeCCCCCceeEEEE---EEeCC---CCceEEEEEeCCCCceeeecC
Q 038182 113 VKIPLRSGADRGLGQYFVS---FRVGS---PPQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~---i~iGT---Ppq~~~vilDTGSdl~Wv~C~ 157 (245)
...|+.... +.|.+. |.||. +.....+++|||+.+++++-.
T Consensus 184 ~~~p~~~~~----~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 184 AYTPVDNSQ----GFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp EEEECBCTT----SSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred EEEEccCCC----ceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 456775322 456665 56765 345789999999999999886
No 45
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=39.30 E-value=29 Score=29.83 Aligned_cols=41 Identities=24% Similarity=0.353 Sum_probs=28.0
Q ss_pred eeeeeeeCCCCCceeEEEE---EEeCC-CCceEEEEEeCCCCceeeecC
Q 038182 113 VKIPLRSGADRGLGQYFVS---FRVGS-PPQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~---i~iGT-Ppq~~~vilDTGSdl~Wv~C~ 157 (245)
...|+.... +.|.+. |.||. +.....+++|||+.++++|-.
T Consensus 180 ~~~p~~~~~----~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~ 224 (323)
T 1bxo_A 180 TYTGVDNSQ----GFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDS 224 (323)
T ss_dssp EEEECBCTT----SSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHH
T ss_pred EEEECCCCC----CeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHH
Confidence 456775322 445554 56765 334678999999999999886
No 46
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=39.23 E-value=38 Score=27.82 Aligned_cols=32 Identities=16% Similarity=0.096 Sum_probs=23.2
Q ss_pred eeEEEE---EEeCC-----CCceEEEEEeCCCCceeeecC
Q 038182 126 GQYFVS---FRVGS-----PPQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 126 ~~Y~v~---i~iGT-----Ppq~~~vilDTGSdl~Wv~C~ 157 (245)
+.|.+. |.||. +.....+++|||+.++++|-.
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 456555 56764 234578999999999998864
No 47
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=37.97 E-value=31 Score=29.73 Aligned_cols=41 Identities=24% Similarity=0.351 Sum_probs=28.3
Q ss_pred eeeeeeeCCCCCceeEEEE---EEeCCC---CceEEEEEeCCCCceeeecC
Q 038182 113 VKIPLRSGADRGLGQYFVS---FRVGSP---PQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~---i~iGTP---pq~~~vilDTGSdl~Wv~C~ 157 (245)
...|+.+.. +.|.+. |.||.- .....+++|||+.+++++-.
T Consensus 183 ~~~p~~~~~----~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 183 TYTAVSTKQ----GFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp EEEECBCTT----SSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred EEEEccCCC----ceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 456775322 445554 567752 34678999999999999886
No 48
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=36.27 E-value=40 Score=29.00 Aligned_cols=41 Identities=27% Similarity=0.397 Sum_probs=28.3
Q ss_pred eeeeeeeCCCCCceeEEEE---EEeCC---CCceEEEEEeCCCCceeeecC
Q 038182 113 VKIPLRSGADRGLGQYFVS---FRVGS---PPQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~---i~iGT---Ppq~~~vilDTGSdl~Wv~C~ 157 (245)
...|+.... +.|.+. |.||. +.....+++|||+.++++|-.
T Consensus 179 ~~~p~~~~~----~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 179 TYTDADSSQ----GYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp EEEECBCTT----SSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred EEEEcCCCC----ceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 456775322 455554 56765 235678999999999999876
No 49
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=36.13 E-value=34 Score=29.42 Aligned_cols=41 Identities=27% Similarity=0.438 Sum_probs=27.7
Q ss_pred eeeeeeeCCCCCceeEEEE---EEeCCC--CceEEEEEeCCCCceeeecC
Q 038182 113 VKIPLRSGADRGLGQYFVS---FRVGSP--PQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~---i~iGTP--pq~~~vilDTGSdl~Wv~C~ 157 (245)
...|+.+.. +.|.+. |.||.+ .....+++|||+.+++++-.
T Consensus 184 ~~~p~~~~~----~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 184 TTVPIDNSR----GWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp EEEECBCTT----SSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred EEEEccCCC----CEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 456765322 445554 567762 34578999999999999875
No 50
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=35.69 E-value=37 Score=29.19 Aligned_cols=41 Identities=22% Similarity=0.355 Sum_probs=27.3
Q ss_pred eeeeeeeCCCCCceeEEEE---EEeCC--CCceEEEEEeCCCCceeeecC
Q 038182 113 VKIPLRSGADRGLGQYFVS---FRVGS--PPQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~---i~iGT--Ppq~~~vilDTGSdl~Wv~C~ 157 (245)
...|+.... +.|.+. |.||. +.....+++|||+.+++++-.
T Consensus 180 ~~~p~~~~~----~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~~ 225 (323)
T 1izd_A 180 TYTDVDNSQ----GFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDS 225 (323)
T ss_dssp EEEECBCTT----SSCEEEESEEEETTEEECCCEEEEECTTCCSEEECHH
T ss_pred EEEECCCCC----ceEEEEECeEEECCcccCCCceEEEeCCCcceeCCHH
Confidence 345664322 455554 45665 234578999999999999876
No 51
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=34.80 E-value=41 Score=25.85 Aligned_cols=28 Identities=21% Similarity=0.419 Sum_probs=21.7
Q ss_pred eEEEEEEeCCCCceEEEEEeCCCCceeeec
Q 038182 127 QYFVSFRVGSPPQKFVLIADTGSDLTWMHC 156 (245)
Q Consensus 127 ~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~C 156 (245)
.-++++.|+- |.+.+++|||.|.+-+.-
T Consensus 22 RP~v~i~I~G--~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 22 EPRITLKVGG--QPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp SSEEEEEETT--EEEEEEECTTCSSCEECS
T ss_pred CCEEEEEECC--EEEEEEEeCCCCeEEEcc
Confidence 3466788874 889999999999877643
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=34.02 E-value=34 Score=28.30 Aligned_cols=27 Identities=33% Similarity=0.437 Sum_probs=22.1
Q ss_pred eEEEEEEeCCCCceEEEEEeCCCCceeee
Q 038182 127 QYFVSFRVGSPPQKFVLIADTGSDLTWMH 155 (245)
Q Consensus 127 ~Y~v~i~iGTPpq~~~vilDTGSdl~Wv~ 155 (245)
.-.+++.||- |.+.+++|||-|.+-+.
T Consensus 8 RP~vtv~I~G--q~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 8 RPLVTIRIGG--QLKEALLDTGADDTVIE 34 (203)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred CCeEEEEECC--EEEEEEEecCCCceEEe
Confidence 3467888984 89999999999987664
No 53
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=33.32 E-value=37 Score=25.83 Aligned_cols=19 Identities=21% Similarity=0.354 Sum_probs=15.7
Q ss_pred ceEEEEEeCCCCceeeecC
Q 038182 139 QKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 139 q~~~vilDTGSdl~Wv~C~ 157 (245)
|.+.+++|||-|.+-+.-.
T Consensus 30 q~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 30 VYITALLDSGADITIISEE 48 (124)
T ss_dssp EEEEEEECTTCSSCEEETT
T ss_pred EEEEEEecCCCCcEEEecc
Confidence 6679999999999877643
No 54
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=26.76 E-value=60 Score=26.35 Aligned_cols=32 Identities=25% Similarity=0.244 Sum_probs=23.2
Q ss_pred eeEEE---EEEeCCC----CceEEEEEeCCCCceeeecC
Q 038182 126 GQYFV---SFRVGSP----PQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 126 ~~Y~v---~i~iGTP----pq~~~vilDTGSdl~Wv~C~ 157 (245)
+.|.+ .|.||.- .....+++|||+.++++|-.
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 34544 4567652 34678999999999999876
No 55
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=25.81 E-value=74 Score=29.25 Aligned_cols=32 Identities=25% Similarity=0.245 Sum_probs=23.3
Q ss_pred eeEEEE---EEeCC-----CCceEEEEEeCCCCceeeecC
Q 038182 126 GQYFVS---FRVGS-----PPQKFVLIADTGSDLTWMHCN 157 (245)
Q Consensus 126 ~~Y~v~---i~iGT-----Ppq~~~vilDTGSdl~Wv~C~ 157 (245)
+.|.+. |.||. +.....+++|||+.++++|-.
T Consensus 231 ~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 231 GYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp TTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHH
T ss_pred CeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHH
Confidence 456554 56664 335678999999999999864
No 56
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=23.44 E-value=99 Score=26.74 Aligned_cols=44 Identities=9% Similarity=0.050 Sum_probs=27.1
Q ss_pred eeeeeeeCCCCCceeEEEE---EEeCCC----CceEEEE-EeCCCCceeeecC
Q 038182 113 VKIPLRSGADRGLGQYFVS---FRVGSP----PQKFVLI-ADTGSDLTWMHCN 157 (245)
Q Consensus 113 ~~~Pl~~g~~~~~~~Y~v~---i~iGTP----pq~~~vi-lDTGSdl~Wv~C~ 157 (245)
...|+..... ....|.+. |.||.- .....++ ||||+.+++++-.
T Consensus 197 ~~~p~~~~~~-~~~~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~ 248 (361)
T 1mpp_A 197 QYTDVLKSRG-GYFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSS 248 (361)
T ss_dssp EEEECEEETT-EEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHH
T ss_pred EEEEcccCCC-ceeEEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHH
Confidence 4557654320 01145454 567652 1345788 9999999999986
Done!