Your job contains 1 sequence.
>038184
MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA
LAGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDDQ
G
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038184
(121 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2034481 - symbol:STRS1 "STRESS RESPONSE SUPPRE... 504 2.9e-48 1
SGD|S000003046 - symbol:DBP3 "RNA-Dependent ATPase, membe... 340 1.3e-30 1
CGD|CAL0005460 - symbol:DBP3 species:5476 "Candida albica... 335 7.6e-30 1
ASPGD|ASPL0000069536 - symbol:AN7424 species:162425 "Emer... 312 1.2e-27 1
POMBASE|SPBC17D1.06 - symbol:dbp3 "ATP-dependent RNA heli... 301 4.7e-26 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 243 1.0e-19 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 234 8.6e-19 1
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m... 235 1.1e-18 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 230 1.8e-18 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 230 2.2e-18 1
UNIPROTKB|E1BII7 - symbol:DDX43 "Uncharacterized protein"... 228 5.2e-18 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 228 7.3e-18 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 223 1.3e-17 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 222 1.5e-17 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 222 1.5e-17 1
DICTYBASE|DDB_G0281925 - symbol:DDB_G0281925 "DEAD/DEAH b... 222 1.9e-17 1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein... 222 2.1e-17 1
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p... 222 2.2e-17 1
UNIPROTKB|Q9NXZ2 - symbol:DDX43 "Probable ATP-dependent R... 222 2.3e-17 1
UNIPROTKB|F1S0I6 - symbol:DDX43 "Uncharacterized protein"... 221 3.0e-17 1
UNIPROTKB|G3MYF0 - symbol:LOC100300937 "Uncharacterized p... 220 3.3e-17 1
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 219 5.2e-17 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 218 5.5e-17 1
UNIPROTKB|F1NQ09 - symbol:DDX43 "Uncharacterized protein"... 214 7.4e-17 1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 218 1.4e-16 1
UNIPROTKB|F1NVJ6 - symbol:DDX43 "Uncharacterized protein"... 214 1.6e-16 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 212 2.0e-16 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 211 2.0e-16 1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 213 2.0e-16 1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 214 2.5e-16 1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 213 2.5e-16 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 212 2.7e-16 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 212 2.9e-16 1
UNIPROTKB|B4DLW8 - symbol:DDX5 "Probable ATP-dependent RN... 210 3.1e-16 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 212 3.3e-16 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 210 3.4e-16 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 211 3.5e-16 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 211 3.5e-16 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 211 3.5e-16 1
UNIPROTKB|E9PT29 - symbol:Ddx17 "Protein Ddx17" species:1... 211 3.5e-16 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 210 3.8e-16 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 210 3.9e-16 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 210 4.1e-16 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 210 4.1e-16 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 210 4.1e-16 1
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 210 4.1e-16 1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 210 4.1e-16 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 210 4.1e-16 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 210 4.1e-16 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 210 4.1e-16 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 210 4.1e-16 1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 211 4.3e-16 1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 211 4.3e-16 1
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation... 210 4.3e-16 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 211 4.3e-16 1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 211 4.3e-16 1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 210 4.8e-16 1
WB|WBGene00013214 - symbol:Y54G11A.3 species:6239 "Caenor... 207 5.7e-16 1
ZFIN|ZDB-GENE-080204-77 - symbol:ddx43 "DEAD (Asp-Glu-Ala... 209 6.9e-16 1
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme... 208 7.8e-16 1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 205 1.1e-15 1
DICTYBASE|DDB_G0275443 - symbol:helB1 "putative RNA splic... 199 1.7e-15 2
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 204 1.8e-15 1
TAIR|locus:2176192 - symbol:AT5G51280 species:3702 "Arabi... 202 2.8e-15 1
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ... 202 3.0e-15 1
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 203 4.6e-15 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 200 5.4e-15 1
UNIPROTKB|I3LRT7 - symbol:DDX4 "Probable ATP-dependent RN... 190 5.4e-15 1
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd... 200 6.2e-15 1
TAIR|locus:2119176 - symbol:AT4G33370 species:3702 "Arabi... 197 8.1e-15 1
DICTYBASE|DDB_G0293064 - symbol:DDB_G0293064 species:4468... 197 9.0e-15 1
DICTYBASE|DDB_G0287361 - symbol:ddx41 "DEAD box protein a... 198 9.3e-15 1
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 199 9.4e-15 1
UNIPROTKB|I3LNN1 - symbol:DDX23 "Uncharacterized protein"... 198 1.2e-14 1
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu... 196 1.3e-14 1
UNIPROTKB|P0A9P6 - symbol:deaD "DeaD, DEAD-box RNA helica... 178 1.5e-14 2
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 199 1.6e-14 1
GENEDB_PFALCIPARUM|PFL1310c - symbol:PFL1310c "ATP-depend... 196 1.8e-14 1
UNIPROTKB|A8MTP9 - symbol:DDX52 "Probable ATP-dependent R... 192 2.3e-14 1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd... 193 3.1e-14 1
UNIPROTKB|Q9Y2R4 - symbol:DDX52 "Probable ATP-dependent R... 192 3.4e-14 1
UNIPROTKB|A5D7C1 - symbol:DDX52 "Probable ATP-dependent R... 191 4.3e-14 1
UNIPROTKB|J9P4L6 - symbol:DDX52 "Uncharacterized protein"... 191 4.3e-14 1
UNIPROTKB|E2RB54 - symbol:DDX52 "Uncharacterized protein"... 191 4.4e-14 1
DICTYBASE|DDB_G0283661 - symbol:ddx3 "DEAD/DEAH box helic... 192 4.5e-14 1
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz... 191 4.6e-14 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 194 4.7e-14 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 194 4.7e-14 1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 194 4.7e-14 1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 194 4.7e-14 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 194 4.7e-14 1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 194 4.7e-14 1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 194 4.7e-14 1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 194 4.7e-14 1
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 193 5.1e-14 1
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 191 5.7e-14 1
TAIR|locus:2057640 - symbol:AT2G33730 species:3702 "Arabi... 191 6.0e-14 1
UNIPROTKB|Q86TM3 - symbol:DDX53 "Probable ATP-dependent R... 190 6.1e-14 1
RGD|621743 - symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box pol... 189 7.1e-14 1
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 191 8.5e-14 1
WARNING: Descriptions of 691 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 99/118 (83%), Positives = 107/118 (90%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VATD+AARGLDIPDVEVVINY+FPLTTEDYVHRIGRTG+AGKKGV+H F T NK LA
Sbjct: 419 LLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLA 478
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDDQ 120
GELVNVLREA QVVP LLKFGTHVKKKESKLYGAHF+EI+ADAPKA KI F+NSDD+
Sbjct: 479 GELVNVLREAGQVVPADLLKFGTHVKKKESKLYGAHFKEIAADAPKATKITFDNSDDE 536
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 340 (124.7 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 67/113 (59%), Positives = 82/113 (72%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+ VIN +FPLT EDYVHRIGRTG+AG+ G +H T K LA
Sbjct: 412 LLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLA 471
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
G LVNVL A Q VP+ L+KFGTH KKKE YG+ F+++ K KKI F+
Sbjct: 472 GGLVNVLNGANQPVPEDLIKFGTHTKKKEHSAYGSFFKDVDL-TKKPKKITFD 523
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 335 (123.0 bits), Expect = 7.6e-30, P = 7.6e-30
Identities = 68/114 (59%), Positives = 84/114 (73%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+VVIN +FPLT EDYVHRIGRTG+AG KG +H T K L+
Sbjct: 453 LLLATDVAARGLDIPNVKVVINLTFPLTIEDYVHRIGRTGRAGAKGTAHTLFTEDEKHLS 512
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPK-AKKIPFN 115
G L N+LR A Q VP+ LLKFG H KKK +YGA ++++ D K AKKI F+
Sbjct: 513 GALCNILRGANQPVPEELLKFGGHTKKKAHSVYGAFYKDV--DMTKTAKKIKFD 564
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 312 (114.9 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 63/112 (56%), Positives = 82/112 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++V+N +FPLT EDYVHRIGRTG+AG G + T +KA +G
Sbjct: 378 VATDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETDKAQSGA 437
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNN 116
L+NVL+ A Q VP+ALLKFG+ VKKK+ YGA F+++ A KI F++
Sbjct: 438 LINVLKAANQEVPEALLKFGSTVKKKQHDAYGAFFKDVEP-GKAATKIVFDD 488
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 301 (111.0 bits), Expect = 4.7e-26, P = 4.7e-26
Identities = 64/111 (57%), Positives = 81/111 (72%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++VIN +FPLT EDYVHRIGRTG+A KG + F T +K+ AGE
Sbjct: 471 VATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQDKSHAGE 530
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
LVNVLR+A+Q +P+ L KFGT VK K + YG+ ++ A A KI F+
Sbjct: 531 LVNVLRQAKQDIPEGLFKFGTAVKPKLNA-YGSRVVDVPVKA--ATKIVFD 578
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 243 (90.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 45/78 (57%), Positives = 58/78 (74%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ ATD+AARGLD+ D++ V+NY FP T EDY+HRIGRTG+AG KG++ F T+ N A
Sbjct: 463 IMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFA 522
Query: 63 GELVNVLREARQVVPDAL 80
ELV +L+EA QVVP L
Sbjct: 523 RELVKILQEAGQVVPPTL 540
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 234 (87.4 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 43/78 (55%), Positives = 60/78 (76%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ +ATD+AARGLD+ D++ VINY +P +EDYVHRIGRTG++ KKG ++ F T+ N + A
Sbjct: 429 IMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKA 488
Query: 63 GELVNVLREARQVVPDAL 80
+L+ VL EA+Q VP AL
Sbjct: 489 KDLLKVLDEAKQTVPQAL 506
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 235 (87.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 46/89 (51%), Positives = 60/89 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A+RGLDI D+ VINY FP E+YVHR+GRTG+AG++G S F T + A+A E
Sbjct: 584 VATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKE 643
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESK 93
L+ +L+EA Q VPD L K + K
Sbjct: 644 LIEILQEAEQEVPDELHNMARRFKAMKDK 672
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 230 (86.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 46/82 (56%), Positives = 56/82 (68%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ ATD+AARGLD+ DV+ VINY FP + EDYVHRIGRTG+AG KG ++ F T N A
Sbjct: 397 IMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFA 456
Query: 63 GELVNVLREARQVVPDALLKFG 84
EL N+L+EA Q V L G
Sbjct: 457 KELTNILQEAGQKVSPELASMG 478
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 230 (86.0 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 42/81 (51%), Positives = 56/81 (69%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+AARG+D+ + VINY P EDYVHRIGRTG+AG G + F T NK L
Sbjct: 413 IMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLG 472
Query: 63 GELVNVLREARQVVPDALLKF 83
+L++++REA Q +P LLK+
Sbjct: 473 AKLISIMREANQNIPPELLKY 493
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 228 (85.3 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV V NY FP E+YVHR+GRTG+AG+ GVS +T ++ +AGE
Sbjct: 541 IATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRNDWKIAGE 600
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESK 93
L+N+L A Q VP+ L+ K + K
Sbjct: 601 LINILERANQSVPEDLVSMAERYKANKLK 629
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 228 (85.3 bits), Expect = 7.3e-18, P = 7.3e-18
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ +ATD+A+RGLDI D++ V+NY FP T E Y+HRIGRT +AG GVS+ LT N LA
Sbjct: 682 IMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLA 741
Query: 63 GELVNVLREARQVVP 77
EL+ VL EA+Q +P
Sbjct: 742 NELIKVLTEAKQKIP 756
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 223 (83.6 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 45/98 (45%), Positives = 59/98 (60%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+AARG+D+ + VINY P EDYVHRIGRTG+ G G + F T N L
Sbjct: 427 IMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLG 486
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFR 100
G+L ++REA Q VP L +F + + YG+H R
Sbjct: 487 GDLCKIMREANQTVPPELQRF-------DRRSYGSHMR 517
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 222 (83.2 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ +ATD+A+RGLDI +V+ VIN+ FP EDYVHRIGRTG+AG G S FLT LA
Sbjct: 413 IMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKYRLA 472
Query: 63 GELVNVLREARQVVPDALLK 82
+LV +LRE+ Q VP L K
Sbjct: 473 KDLVKILRESEQPVPPQLEK 492
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 222 (83.2 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 45/80 (56%), Positives = 56/80 (70%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ +ATD+A+RGLDI +V+ VIN+ FP EDYVHRIGRTG+AG G S FLT LA
Sbjct: 413 IMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKYRLA 472
Query: 63 GELVNVLREARQVVPDALLK 82
+LV +LRE+ Q VP L K
Sbjct: 473 KDLVKILRESEQPVPPQLEK 492
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 222 (83.2 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 46/92 (50%), Positives = 60/92 (65%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARGLDIP V+ V NY P EDYVHRIGRTG+AGK G + ++T L +
Sbjct: 416 IATDVAARGLDIPSVKAVFNYRLPGNIEDYVHRIGRTGRAGKTGDAWSYVTTQTPNLR-D 474
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYG 96
LV +L+ Q +PD L KF H ++ S+ YG
Sbjct: 475 LVKILQRTNQKIPDFLEKFAVHSRQGISR-YG 505
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 222 (83.2 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV V NY+FP E+YVHR+GRTG+AGK G S +T + +AGE
Sbjct: 515 IATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDDWKVAGE 574
Query: 65 LVNVLREARQVVPDALLKFGTHVK-KKESKLYG 96
L+ +L+ A Q +P+ LL K K+ K G
Sbjct: 575 LIEILQRANQSIPEDLLSMAEQYKLHKQEKETG 607
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 222 (83.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV V NY+FP E+YVHR+GRTG+AGK G S +T + +AGE
Sbjct: 524 IATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDDWKVAGE 583
Query: 65 LVNVLREARQVVPDALLKFGTHVK-KKESKLYG 96
L+ +L+ A Q +P+ LL K K+ K G
Sbjct: 584 LIEILQRANQSIPEDLLSMAEQYKLHKQEKETG 616
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 222 (83.2 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 44/91 (48%), Positives = 63/91 (69%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV V N+ FP E+YVHRIGRTG+AG+ GVS LT ++ +A E
Sbjct: 542 IATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASE 601
Query: 65 LVNVLREARQVVPDALL----KFGTHVKKKE 91
L+N+L A Q +P+ L+ +F H +K+E
Sbjct: 602 LINILERANQSIPEELVSMAERFKAHQQKRE 632
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 221 (82.9 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 41/89 (46%), Positives = 60/89 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV V NY FP E+YVHR+GRTG+AG+ GVS +T + +AGE
Sbjct: 544 IATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRSDWKIAGE 603
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESK 93
L+++L A Q +P+ L++ K + K
Sbjct: 604 LIHILERANQSIPEDLVEMAERYKANKLK 632
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 220 (82.5 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 43/94 (45%), Positives = 60/94 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARGLD+ DV V NY+FP E+YVHR+GRTG+AGK G S +T + +A E
Sbjct: 501 IATDLAARGLDVSDVTHVYNYNFPRNIEEYVHRVGRTGRAGKIGESITLVTQDDWKIADE 560
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAH 98
L+ +L+ A Q+VP +L KK+ + H
Sbjct: 561 LIKILQRANQIVPPSLRSMADRFKKQHKQKNQPH 594
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 219 (82.2 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 52/120 (43%), Positives = 66/120 (55%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDIP+V VINY P +DYVHRIGRTG+AG G++ F +NK +
Sbjct: 498 VATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKG 557
Query: 65 LVNVLREARQVVPDALLKF---GTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDDQG 121
L+ +L EA Q VPD L K G K G R S D ++ + NS + G
Sbjct: 558 LIELLSEANQEVPDFLTKIAREGAFGKMTRGGGRGGSSRGPSRDFRRSGNSGWGNSGNSG 617
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 218 (81.8 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 47/102 (46%), Positives = 63/102 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V V+N+ P +DYVHRIGRTG+AGK G++ F +N LA
Sbjct: 463 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARS 522
Query: 65 LVNVLREARQVVPDALLKFGTHVK----KKES--KLYGAHFR 100
L +++EA Q VP+ L ++ + KK S + G FR
Sbjct: 523 LAELMQEANQEVPEWLTRYASRASFGGGKKRSGGRFGGRDFR 564
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 214 (80.4 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 39/87 (44%), Positives = 59/87 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A+RGLD+ D+ V N+ FP E+YVHR+GRTG+AG+ G + +T + A E
Sbjct: 352 VATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAVTLITKKDWKAASE 411
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKE 91
L+++L+ A+QVVPD L+ K+ +
Sbjct: 412 LIDILQRAKQVVPDELISMAERYKQHQ 438
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 218 (81.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 43/73 (58%), Positives = 51/73 (69%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARGLDI D+ VVINY FP EDYVHRIGRTG+AG GV+ F T + A +
Sbjct: 734 IATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPD 793
Query: 65 LVNVLREARQVVP 77
L+ VL A Q VP
Sbjct: 794 LIKVLEGANQQVP 806
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 214 (80.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 39/87 (44%), Positives = 59/87 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A+RGLD+ D+ V N+ FP E+YVHR+GRTG+AG+ G + +T + A E
Sbjct: 539 VATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAVTLITKKDWKAASE 598
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKE 91
L+++L+ A+QVVPD L+ K+ +
Sbjct: 599 LIDILQRAKQVVPDELISMAERYKQHQ 625
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 212 (79.7 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+A+RG+D+ + V NY FP TEDYVHRIGRTG+AG KG ++ + T+ N A
Sbjct: 422 IMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQA 481
Query: 63 GELVNVLREARQVVPDAL 80
ELV++L EA+Q + L
Sbjct: 482 RELVSILSEAKQDIDPKL 499
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 211 (79.3 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDYVHRIGRT ++ KG ++ F T N A E
Sbjct: 392 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 451
Query: 65 LVNVLREARQVVPDALLKFGTH 86
L+ VL EA Q + L++ H
Sbjct: 452 LIKVLEEANQAINPKLMQLVDH 473
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 213 (80.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V V+N+ P +DYVHRIGRTG+AGK G++ F + N +LA
Sbjct: 473 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARP 532
Query: 65 LVNVLREARQVVPDALLKFGT 85
L +++EA Q VP+ L ++ +
Sbjct: 533 LAELMQEANQEVPEWLTRYAS 553
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 214 (80.4 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLD+ DV+ VINY +P +EDYVHRIGRTG++ G ++ T+ N A +
Sbjct: 459 VATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKAND 518
Query: 65 LVNVLREARQVVPDALL 81
L+ VLREA Q + L+
Sbjct: 519 LIQVLREANQTINPKLM 535
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 213 (80.0 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 40/81 (49%), Positives = 55/81 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLD+ D+ VV+NY FP EDYVHRIGRTG+AG G+++ F + + A +
Sbjct: 528 VATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASD 587
Query: 65 LVNVLREARQVVPDALLKFGT 85
L+ +L A Q VP + + T
Sbjct: 588 LIKILEGANQKVPPQVREMAT 608
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 212 (79.7 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 40/81 (49%), Positives = 56/81 (69%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V V+N+ P +DYVHRIGRTG+AG G++ F ++N +A
Sbjct: 460 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKP 519
Query: 65 LVNVLREARQVVPDALLKFGT 85
L +++EA Q VPD L ++ +
Sbjct: 520 LAELMQEANQEVPDWLTRYAS 540
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 212 (79.7 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDYVHRIGRT ++ KG ++ F T N A +
Sbjct: 397 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARD 456
Query: 65 LVNVLREARQVVPDALLK 82
LV VL EARQ + LL+
Sbjct: 457 LVRVLEEARQAINPKLLQ 474
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 210 (79.0 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 317 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 376
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 377 LISVLREANQAINPKLLQ 394
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 212 (79.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLD+ ++ VIN+ +P +EDY+HRIGRTG++ KG S F T +N A
Sbjct: 585 VATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKA 644
Query: 65 LVNVLREARQVVPDAL 80
LV+VLREA Q + AL
Sbjct: 645 LVDVLREANQEINPAL 660
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 210 (79.0 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+A+RG+D+ D+ VINY +P +EDYVHRIGRTG+AG KG + F T N A
Sbjct: 440 IMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQA 499
Query: 63 GELVNVLREARQVVPDAL 80
+LV +L EA+Q + L
Sbjct: 500 RDLVTILSEAKQQIDPRL 517
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 211 (79.3 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDYVHRIGRT ++ KG ++ F T N A E
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 65 LVNVLREARQVVPDALLKFGTH 86
L+ VL EA Q + L++ H
Sbjct: 454 LIKVLEEANQAINPKLMQLVDH 475
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 211 (79.3 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDYVHRIGRT ++ KG ++ F T N A E
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 65 LVNVLREARQVVPDALLKFGTH 86
L+ VL EA Q + L++ H
Sbjct: 454 LIKVLEEANQAINPKLMQLVDH 475
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 211 (79.3 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDYVHRIGRT ++ KG ++ F T N A E
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 65 LVNVLREARQVVPDALLKFGTH 86
L+ VL EA Q + L++ H
Sbjct: 454 LIKVLEEANQAINPKLMQLVDH 475
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 211 (79.3 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDYVHRIGRT ++ KG ++ F T N A E
Sbjct: 393 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 452
Query: 65 LVNVLREARQVVPDALLKFGTH 86
L+ VL EA Q + L++ H
Sbjct: 453 LIKVLEEANQAINPKLMQLVDH 474
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 210 (79.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 384 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVND 443
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 444 LISVLREANQAINPKLLQ 461
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 210 (79.0 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 392 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVND 451
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 452 LISVLREANQAINPKLLQ 469
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 210 (79.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 456 LISVLREANQAINPKLLQ 473
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 210 (79.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 456 LISVLREANQAINPKLLQ 473
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 210 (79.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 456 LISVLREANQAINPKLLQ 473
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 210 (79.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 456 LISVLREANQAINPKLLQ 473
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 210 (79.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 456 LISVLREANQAINPKLLQ 473
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 210 (79.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 456 LISVLREANQAINPKLLQ 473
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 210 (79.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 456 LISVLREANQAINPKLLQ 473
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 210 (79.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 456 LISVLREANQAINPKLLQ 473
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 210 (79.0 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 44/116 (37%), Positives = 68/116 (58%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VIN+ +P +EDY+HRIGRT ++ K G ++ F T +N A +
Sbjct: 398 IATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHD 457
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNN-SDD 119
LV+VLREA Q + L++ + G +R+ D + F + S D
Sbjct: 458 LVSVLREANQAINPKLIQMAEDRGGRSRGGRGGGYRDDRRDRHSGSRRDFGSYSQD 513
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 211 (79.3 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDYVHRIGRT ++ KG ++ F T N A E
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 65 LVNVLREARQVVPDALLKFGTH 86
L+ VL EA Q + L++ H
Sbjct: 533 LIKVLEEANQAINPKLMQLVDH 554
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 211 (79.3 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDYVHRIGRT ++ KG ++ F T N A E
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 65 LVNVLREARQVVPDALLKFGTH 86
L+ VL EA Q + L++ H
Sbjct: 533 LIKVLEEANQAINPKLMQLVDH 554
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 210 (79.0 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 41/79 (51%), Positives = 54/79 (68%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VAT +A+RGLDIP+V VINY P +DYVHRIGRTG+AG G + F +NK +A
Sbjct: 483 IMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIA 542
Query: 63 GELVNVLREARQVVPDALL 81
EL+ +L+EA Q P L+
Sbjct: 543 KELIELLQEANQECPSFLI 561
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 211 (79.3 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDYVHRIGRT ++ KG ++ F T N A E
Sbjct: 475 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 534
Query: 65 LVNVLREARQVVPDALLKFGTH 86
L+ VL EA Q + L++ H
Sbjct: 535 LIKVLEEANQAINPKLMQLVDH 556
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 211 (79.3 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDYVHRIGRT ++ KG ++ F T N A E
Sbjct: 475 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 534
Query: 65 LVNVLREARQVVPDALLKFGTH 86
L+ VL EA Q + L++ H
Sbjct: 535 LIKVLEEANQAINPKLMQLVDH 556
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 210 (79.0 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV+ VINY +P ++EDY+HRIGRT ++ K G ++ F T +N +
Sbjct: 453 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 512
Query: 65 LVNVLREARQVVPDALLK 82
L++VLREA Q + LL+
Sbjct: 513 LISVLREANQAINPKLLQ 530
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 207 (77.9 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 37/76 (48%), Positives = 57/76 (75%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A+RG+D+PD+ V+NY FP+ E+YVHR+GRTG+AG+KG + FL ++++
Sbjct: 393 VATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLWWNDRSNFEG 452
Query: 65 LVNVLREARQVVPDAL 80
L+ +L ++ Q VPD L
Sbjct: 453 LIQILEKSEQEVPDQL 468
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 209 (78.6 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 40/94 (42%), Positives = 61/94 (64%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A+RGLD+ D+ V NY FP E+YVHR+GRTG+AG+ G S +T + +A E
Sbjct: 578 VATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRAGRSGESVTLVTREDWRVAAE 637
Query: 65 LVNVLREARQVVPDALLKFGTHVKK--KESKLYG 96
L+ +L + Q VP+ L+ +K +E +++G
Sbjct: 638 LITILERSGQDVPEELVLMAERYEKHRREKEMFG 671
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 208 (78.3 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 40/76 (52%), Positives = 53/76 (69%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDIP+V VINY P +DYVHRIGRTG+AG G++ F N+ + +
Sbjct: 501 VATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRD 560
Query: 65 LVNVLREARQVVPDAL 80
L+++L+EA Q VP L
Sbjct: 561 LIDLLKEAHQEVPSFL 576
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 205 (77.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+A+RG+D+ ++ V+NY +P +EDY+HRIGRTG+AG KG + F T N A
Sbjct: 427 IMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQA 486
Query: 63 GELVNVLREARQVVPDALLKFGTH 86
+L+ VL+EA+Q + L + +
Sbjct: 487 RDLLGVLQEAKQEIDPRLAEMARY 510
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 199 (75.1 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 39/91 (42%), Positives = 59/91 (64%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+AT +A+RGLDI D+ +V+N+ P EDYVHR+GRTG+AG +G ++ F+T + +
Sbjct: 811 IATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITPDEERFSSS 870
Query: 65 LVNVLREARQVVPDALLKFG-THVKK-KESK 93
++ L ++ VPD L K T+ KK KE K
Sbjct: 871 IIKALEQSGSKVPDELRKLNDTYEKKRKEGK 901
Score = 36 (17.7 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 88 KKKESKLYGAHFREISADAPKAK 110
+K++ K YG E D K K
Sbjct: 929 RKQQRKAYGIEEEEEEEDEDKEK 951
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 204 (76.9 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLD+ D+ V+NY FP EDYVHRIGRTG+AG G + F + + A +
Sbjct: 457 VATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASD 516
Query: 65 LVNVLREARQVVPDALLKFGT 85
L+ +L A Q VP + + T
Sbjct: 517 LIKILEGANQRVPPQIREMAT 537
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 202 (76.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 38/89 (42%), Positives = 61/89 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT-NHNKALAG 63
VATD+A++GLD PD++ VINY P E+YVHRIGRTG+ GK G++ F+ N ++
Sbjct: 452 VATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLL 511
Query: 64 ELVNVLREARQVVPDALLKFGTHVKKKES 92
+L ++L+EA+Q +P L + +++ E+
Sbjct: 512 DLKHLLQEAKQRIPPVLAELNDPMEEAET 540
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 202 (76.2 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 41/76 (53%), Positives = 52/76 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDIP+V VINY P +DYVHRIGRTG+AG GV+ F ++N+ +
Sbjct: 466 VATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKG 525
Query: 65 LVNVLREARQVVPDAL 80
L+ +L EA Q VP L
Sbjct: 526 LMEILNEANQEVPTFL 541
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 203 (76.5 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 39/77 (50%), Positives = 55/77 (71%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ D++ VINY +P ++E+YVHRIGRTG+ + G ++ F T N A E
Sbjct: 546 IATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARE 605
Query: 65 LVNVLREARQVVPDALL 81
L++VL EA Q ALL
Sbjct: 606 LISVLEEAGQTPSQALL 622
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 200 (75.5 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 40/84 (47%), Positives = 56/84 (66%)
Query: 5 VATDIAARGL--DIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ATD+A+RGL D+ DV+ VINY +P ++EDYVHRIGRT ++ KG ++ F T N A
Sbjct: 394 IATDVASRGLGFDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQA 453
Query: 63 GELVNVLREARQVVPDALLKFGTH 86
EL+ VL EA Q + L++ H
Sbjct: 454 RELIKVLEEANQAINPKLMQLVDH 477
>UNIPROTKB|I3LRT7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00620000087942 EMBL:CU929824
Ensembl:ENSSSCT00000031627 OMA:VGDERTM Uniprot:I3LRT7
Length = 290
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 48/108 (44%), Positives = 61/108 (56%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P T ++YVHRIGRTG+ G G + F + LA
Sbjct: 162 VATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDESDSHLAQP 221
Query: 65 LVNVLREARQVVPDAL--LKFGTHVKKKESKLYGAHFREISADAPKAK 110
LV VL +A+Q VP L + F T+V G F S D K K
Sbjct: 222 LVKVLSDAQQDVPAWLEEIAFSTYVPGFSGSSRGNVFA--SVDTRKGK 267
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 200 (75.5 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 39/76 (51%), Positives = 55/76 (72%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDIP+V+ VINY P ++YVHRIGRTG+ G G++ F + N+ +A E
Sbjct: 547 VATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIARE 606
Query: 65 LVNVLREARQVVPDAL 80
L++++ EA Q +PD L
Sbjct: 607 LMDLIVEANQELPDWL 622
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 197 (74.4 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 38/89 (42%), Positives = 61/89 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT-NHNKALAG 63
VATD+A++GLD PD++ VINY P E+YVHRIGRTG+ GK G++ F+ N ++
Sbjct: 403 VATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLL 462
Query: 64 ELVNVLREARQVVPDALLKFGTHVKKKES 92
+L ++L+EA+Q +P L + +++ E+
Sbjct: 463 DLKHLLQEAKQRIPPVLAELNGPMEETET 491
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 197 (74.4 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 41/80 (51%), Positives = 53/80 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHN---KAL 61
VATD+A+RGLDI + VIN+S P E YVHRIGRTG+AG G SH L+N++ L
Sbjct: 445 VATDVASRGLDIKGISHVINFSLPSDCETYVHRIGRTGRAGALGTSHSILSNNSLDDMEL 504
Query: 62 AGELVNVLREARQVVPDALL 81
G+L N+L+ + Q VP L
Sbjct: 505 VGDLTNLLQRSEQEVPSEFL 524
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 198 (74.8 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 39/79 (49%), Positives = 58/79 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHN-KALAG 63
VATD+A++GLD P+++ VIN+ P E+Y+HRIGRTG+ G KGV+ F+ +N ++L
Sbjct: 529 VATDVASKGLDFPEIQHVINFDMPREIENYIHRIGRTGRRGNKGVATTFINKNNTESLLL 588
Query: 64 ELVNVLREARQVVPDALLK 82
+L +L EA+Q VP ALL+
Sbjct: 589 DLKYLLIEAKQKVPPALLE 607
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 199 (75.1 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP + V+NY E + HRIGRTG+AG+KG ++ +T+ +K AG
Sbjct: 569 VATDVAARGLDIPHIRNVVNYDTARDIETHTHRIGRTGRAGEKGNAYTLVTDKDKEFAGH 628
Query: 65 LVNVLREARQVVPDALLK 82
LV L A Q+VPD L++
Sbjct: 629 LVRNLEGADQLVPDDLME 646
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 198 (74.8 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 41/81 (50%), Positives = 53/81 (65%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A RG+DI DV +V+NY EDY+HRIGRTG+AGK GV+ FLT + A+ E
Sbjct: 700 VATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYE 759
Query: 65 LVNVLREAR-QVVPDALLKFG 84
L + E+ +P AL K G
Sbjct: 760 LKQAILESPVSAIPPALEKQG 780
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 196 (74.1 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 41/78 (52%), Positives = 50/78 (64%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VAT +AARGLDIP+V VINY P +DYVHRIGRTG+AG G++ F + N +
Sbjct: 452 LLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIV 511
Query: 63 GELVNVLREARQVVPDAL 80
L +L EA Q VP L
Sbjct: 512 KGLHEILTEANQEVPSFL 529
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 178 (67.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 36/97 (37%), Positives = 59/97 (60%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARGLD+ + +V+NY P+ +E YVHRIGRTG+AG+ G + F+ N + L
Sbjct: 300 IATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRL--- 356
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFRE 101
L N+ R + +P+ L + K+ + + A ++
Sbjct: 357 LRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQ 393
Score = 41 (19.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 102 ISADAPKAKKIPFNNSDDQG 121
+ DAP K F + DD+G
Sbjct: 440 VPPDAPMRPKREFRDRDDRG 459
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 199 (75.1 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 44/98 (44%), Positives = 63/98 (64%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +AT +AARGLD+ ++E+V+N+ P EDYVHR+GRTG+AG+KG + F++ + A
Sbjct: 829 LLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYA 888
Query: 63 GELVNVLREARQVVPDAL--LKFGTHVKKKESKLYGAH 98
+LV L + Q VPD L L G VK K+ + AH
Sbjct: 889 PDLVKALELSEQPVPDDLKALADGFMVKVKQG-IEQAH 925
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 196 (74.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 41/81 (50%), Positives = 52/81 (64%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKG-----VSHPFLTNHNK 59
VATD+A+RGLDI ++ VVINY P T EDY+HRIGRTG+AGKKG S+ +
Sbjct: 655 VATDVASRGLDIKNISVVINYDIPNTIEDYIHRIGRTGRAGKKGKSILFFSYDYYMPQKL 714
Query: 60 ALAGELVNVLREARQVVPDAL 80
A EL+ +L + Q VP L
Sbjct: 715 KFAKELIKLLNKTNQTVPPQL 735
>UNIPROTKB|A8MTP9 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000242486
HOVERGEN:HBG051332 EMBL:AC091199 HGNC:HGNC:20038
PharmGKB:PA134904836 ChiTaRS:DDX52 NextBio:42007 IPI:IPI00394982
ProteinModelPortal:A8MTP9 SMR:A8MTP9 STRING:A8MTP9 PRIDE:A8MTP9
Ensembl:ENST00000394367 ArrayExpress:A8MTP9 Bgee:A8MTP9
Uniprot:A8MTP9
Length = 491
Score = 192 (72.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 40/109 (36%), Positives = 65/109 (59%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T + ARG+D V +VINY FP ++ +Y+HRIGRTG+AG KG + F T +K
Sbjct: 355 IWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKP 414
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHF-REISADAPK 108
L + NV+++A VP+ + F + K++ K+ RE + PK
Sbjct: 415 LLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKKPLERESISTTPK 463
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 193 (73.0 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 37/76 (48%), Positives = 53/76 (69%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDIP+V VINY P +++YVHRIGRTG+ G G++ F + N+ + +
Sbjct: 453 VATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRD 512
Query: 65 LVNVLREARQVVPDAL 80
L N++ E+ Q VP+ L
Sbjct: 513 LKNLIVESNQEVPEWL 528
>UNIPROTKB|Q9Y2R4 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AF077033 EMBL:AK001652 EMBL:AK093661 EMBL:AC091199
EMBL:BC041785 EMBL:AJ010840 IPI:IPI00032423 RefSeq:NP_008941.2
UniGene:Hs.590937 PDB:3DKP PDBsum:3DKP ProteinModelPortal:Q9Y2R4
SMR:Q9Y2R4 IntAct:Q9Y2R4 STRING:Q9Y2R4 PhosphoSite:Q9Y2R4
DMDM:296439375 SWISS-2DPAGE:Q9Y2R4 PaxDb:Q9Y2R4 PRIDE:Q9Y2R4
Ensembl:ENST00000349699 GeneID:11056 KEGG:hsa:11056 UCSC:uc002hoh.2
GeneCards:GC17M035969 HGNC:HGNC:20038 MIM:612500 neXtProt:NX_Q9Y2R4
PharmGKB:PA134904836 InParanoid:Q9Y2R4 PhylomeDB:Q9Y2R4
ChiTaRS:DDX52 EvolutionaryTrace:Q9Y2R4 GenomeRNAi:11056
NextBio:42007 ArrayExpress:Q9Y2R4 Bgee:Q9Y2R4 CleanEx:HS_DDX52
Genevestigator:Q9Y2R4 GermOnline:ENSG00000141141 Uniprot:Q9Y2R4
Length = 599
Score = 192 (72.6 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 40/109 (36%), Positives = 65/109 (59%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T + ARG+D V +VINY FP ++ +Y+HRIGRTG+AG KG + F T +K
Sbjct: 463 IWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKP 522
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHF-REISADAPK 108
L + NV+++A VP+ + F + K++ K+ RE + PK
Sbjct: 523 LLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKKPLERESISTTPK 571
>UNIPROTKB|A5D7C1 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:BC140501 IPI:IPI00692860
RefSeq:NP_001096708.1 UniGene:Bt.51117 ProteinModelPortal:A5D7C1
SMR:A5D7C1 PRIDE:A5D7C1 Ensembl:ENSBTAT00000013622 GeneID:510826
KEGG:bta:510826 CTD:11056 GeneTree:ENSGT00550000074863
HOGENOM:HOG000242486 HOVERGEN:HBG051332 InParanoid:A5D7C1 KO:K14779
OMA:NVMKQSG OrthoDB:EOG4XKV6Q NextBio:20869637 ArrayExpress:A5D7C1
Uniprot:A5D7C1
Length = 596
Score = 191 (72.3 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 40/109 (36%), Positives = 65/109 (59%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T + ARG+D V +VINY FP ++ +Y+HRIGRTG+AG KG + F T +K
Sbjct: 461 IWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKP 520
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHF-REISADAPK 108
L + NV+++A VP+ + F + K++ K+ RE + PK
Sbjct: 521 LLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKKPLERESISTTPK 569
>UNIPROTKB|J9P4L6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AAEX03026218 Ensembl:ENSCAFT00000021498 Uniprot:J9P4L6
Length = 598
Score = 191 (72.3 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 40/109 (36%), Positives = 65/109 (59%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T + ARG+D V +VINY FP ++ +Y+HRIGRTG+AG KG + F T +K
Sbjct: 462 IWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKP 521
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHF-REISADAPK 108
L + NV+++A VP+ + F + K++ K+ RE + PK
Sbjct: 522 LLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKKPLERESISTTPK 570
>UNIPROTKB|E2RB54 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:ERESINT
EMBL:AAEX03006616 Ensembl:ENSCAFT00000028820 Uniprot:E2RB54
Length = 601
Score = 191 (72.3 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 40/109 (36%), Positives = 65/109 (59%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T + ARG+D V +VINY FP ++ +Y+HRIGRTG+AG KG + F T +K
Sbjct: 465 IWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKP 524
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHF-REISADAPK 108
L + NV+++A VP+ + F + K++ K+ RE + PK
Sbjct: 525 LLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKKPLERESISTTPK 573
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 192 (72.6 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATDIA+RGL I +V +VIN+ P YVHRIGRTG+AGKKG++ F NK + E
Sbjct: 559 VATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAISFFNEKNKPVGAE 618
Query: 65 LVNVLREARQVVPD 78
L+ +++ + Q +PD
Sbjct: 619 LLKLMKASNQDIPD 632
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 191 (72.3 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 42/85 (49%), Positives = 56/85 (65%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT-NHNKALAG 63
VAT +A+RGLDIPDV+ V+N+ P T +DYVHRIGRTG+ G G + F + + LA
Sbjct: 488 VATSVASRGLDIPDVQHVVNFDLPNTIDDYVHRIGRTGRCGNTGRAVSFYDPDVDSQLAR 547
Query: 64 ELVNVLREARQVVPDALLK--FGTH 86
LV +L +A+Q VP L + FG H
Sbjct: 548 SLVGILAKAQQEVPSWLEESAFGAH 572
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 194 (73.4 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 43/109 (39%), Positives = 63/109 (57%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VAT +AARGLD+ + +V+NYS P EDYVHR GRTG+AG KG ++ F+T A
Sbjct: 671 LLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQARYA 730
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
G+++ L + +P L K K+++ K G ++ S + K K
Sbjct: 731 GDIIKALELSGNPIPADLEKLWADFKEQQ-KAEGKLIKKSSGFSGKGFK 778
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 194 (73.4 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 44/109 (40%), Positives = 63/109 (57%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VAT +AARGLD+ + +V+NYS P EDYVHR GRTG+AG KG ++ F+T A
Sbjct: 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
G+++ L + VP L K + K ++ K G ++ S + K K
Sbjct: 732 GDIIKALELSGTAVPPDLEKLWSDFKDQQ-KAEGKIIKKSSGFSGKGFK 779
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 194 (73.4 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 44/109 (40%), Positives = 63/109 (57%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VAT +AARGLD+ + +V+NYS P EDYVHR GRTG+AG KG ++ F+T A
Sbjct: 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
G+++ L + VP L K + K ++ K G ++ S + K K
Sbjct: 732 GDIIKALELSGTAVPPDLEKLWSDFKDQQ-KAEGKIIKKSSGFSGKGFK 779
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 194 (73.4 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 44/109 (40%), Positives = 63/109 (57%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VAT +AARGLD+ + +V+NYS P EDYVHR GRTG+AG KG ++ F+T A
Sbjct: 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
G+++ L + VP L K + K ++ K G ++ S + K K
Sbjct: 732 GDIIKALELSGTAVPPDLEKLWSDFKDQQ-KAEGKIIKKSSGFSGKGFK 779
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 194 (73.4 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 44/109 (40%), Positives = 63/109 (57%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VAT +AARGLD+ + +V+NYS P EDYVHR GRTG+AG KG ++ F+T A
Sbjct: 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
G+++ L + VP L K + K ++ K G ++ S + K K
Sbjct: 732 GDIIKALELSGTAVPPDLEKLWSDFKDQQ-KAEGKIIKKSSGFSGKGFK 779
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 194 (73.4 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 44/109 (40%), Positives = 63/109 (57%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VAT +AARGLD+ + +V+NYS P EDYVHR GRTG+AG KG ++ F+T A
Sbjct: 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
G+++ L + VP L K + K ++ K G ++ S + K K
Sbjct: 732 GDIIKALELSGTAVPPDLEKLWSDFKDQQ-KAEGKIIKKSSGFSGKGFK 779
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 194 (73.4 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 44/109 (40%), Positives = 63/109 (57%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VAT +AARGLD+ + +V+NYS P EDYVHR GRTG+AG KG ++ F+T A
Sbjct: 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
G+++ L + VP L K + K ++ K G ++ S + K K
Sbjct: 732 GDIIKALELSGTAVPPDLEKLWSDFKDQQ-KAEGKIIKKSSGFSGKGFK 779
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 194 (73.4 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 44/109 (40%), Positives = 63/109 (57%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VAT +AARGLD+ + +V+NYS P EDYVHR GRTG+AG KG ++ F+T A
Sbjct: 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
G+++ L + VP L K + K ++ K G ++ S + K K
Sbjct: 732 GDIIKALELSGTAVPPDLEKLWSDFKDQQ-KAEGKIIKKSSGFSGKGFK 779
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 193 (73.0 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP + V+NY + + HRIGRTG+AG+KGV++ LT + + AG+
Sbjct: 557 VATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTTKDTSFAGD 616
Query: 65 LVNVLREARQVVPDALL 81
LV L A Q V LL
Sbjct: 617 LVRNLEGANQSVSKDLL 633
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 191 (72.3 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP ++ VINY + + HRIGRTG+AG+KGV++ LT + AG+
Sbjct: 548 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 607
Query: 65 LVNVLREARQVVPDALL 81
LV L A Q V LL
Sbjct: 608 LVRNLEGANQHVSKELL 624
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 191 (72.3 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 39/78 (50%), Positives = 50/78 (64%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+ RG+DIPDV VINY P E Y HRIGRTG+AGK GV+ FLT H+ + +
Sbjct: 631 VATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYD 690
Query: 65 LVNVLREARQVVPDALLK 82
L +L ++ VP L +
Sbjct: 691 LKQMLVQSNSAVPPELAR 708
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 190 (71.9 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 41/110 (37%), Positives = 59/110 (53%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ TDI +RGLD+ DV V NY FP + YVHR+G G+ GK G S +T + +AGE
Sbjct: 522 ITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGE 581
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPF 114
L+ +L A Q VP+ L+ K + K + RE + P ++ F
Sbjct: 582 LIKILDRANQSVPEDLVVMAEQYKLNQQKRH----RETRSRKPGQRRKEF 627
>RGD|621743 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:621743
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
CTD:11056 GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AB055628 IPI:IPI00201365 RefSeq:NP_445977.1 UniGene:Rn.18605
ProteinModelPortal:Q99PT0 SMR:Q99PT0 PRIDE:Q99PT0
Ensembl:ENSRNOT00000003600 GeneID:85432 KEGG:rno:85432
InParanoid:Q99PT0 NextBio:617542 Genevestigator:Q99PT0
GermOnline:ENSRNOG00000002612 Uniprot:Q99PT0
Length = 598
Score = 189 (71.6 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 39/109 (35%), Positives = 65/109 (59%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T + ARG+D V +VINY FP ++ +Y+HRIGRTG+AG +G + F T +K
Sbjct: 464 IWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKP 523
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHF-REISADAPK 108
L + NV+++A VP+ + F + K++ K+ RE + PK
Sbjct: 524 LLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKKPLERESISTTPK 572
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 191 (72.3 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP ++ VINY + + HRIGRTG+AG+KGV++ LT + AG+
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 65 LVNVLREARQVVPDALL 81
LV L A Q V LL
Sbjct: 613 LVRNLEGANQHVSKELL 629
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 191 (72.3 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP ++ VINY + + HRIGRTG+AG+KGV++ LT + AG+
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 65 LVNVLREARQVVPDALL 81
LV L A Q V LL
Sbjct: 613 LVRNLEGANQHVSKELL 629
>UNIPROTKB|I3LJA0 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:FP565631 EMBL:FP312903 Ensembl:ENSSSCT00000024730
Uniprot:I3LJA0
Length = 507
Score = 187 (70.9 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 39/109 (35%), Positives = 64/109 (58%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T + ARG+D V +VINY FP ++ +Y+HRIGRTG+AG KG + F T +K
Sbjct: 371 IWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKP 430
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHF-REISADAPK 108
L + NV+++A VP+ + F + K++ ++ RE PK
Sbjct: 431 LLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKRMIKKPLERESICTTPK 479
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 191 (72.3 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP ++ VINY + + HRIGRTG+AG+KGV++ LT + AG+
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 65 LVNVLREARQVVPDALL 81
LV L A Q V LL
Sbjct: 613 LVRNLEGANQHVSKELL 629
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 191 (72.3 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP ++ VINY + + HRIGRTG+AG+KGV++ LT + AG+
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 65 LVNVLREARQVVPDALL 81
LV L A Q V LL
Sbjct: 613 LVRNLEGANQHVSKELL 629
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 191 (72.3 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP ++ VINY + + HRIGRTG+AG+KGV++ LT + AG+
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 65 LVNVLREARQVVPDALL 81
LV L A Q V LL
Sbjct: 613 LVRNLEGANQHVSKELL 629
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 191 (72.3 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP ++ VINY + + HRIGRTG+AG+KGV++ LT + AG+
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 65 LVNVLREARQVVPDALL 81
LV L A Q V LL
Sbjct: 613 LVRNLEGANQHVSKELL 629
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 191 (72.3 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP ++ VINY + + HRIGRTG+AG+KGV++ LT + AG+
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 65 LVNVLREARQVVPDALL 81
LV L A Q V LL
Sbjct: 613 LVRNLEGANQHVSKELL 629
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 191 (72.3 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP ++ VINY + + HRIGRTG+AG+KGV++ LT + AG+
Sbjct: 555 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 614
Query: 65 LVNVLREARQVVPDALL 81
LV L A Q V LL
Sbjct: 615 LVRNLEGANQHVSKELL 631
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 191 (72.3 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 40/77 (51%), Positives = 51/77 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP ++ VINY + + HRIGRTG+AG+KGV++ LT + AG+
Sbjct: 552 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 611
Query: 65 LVNVLREARQVVPDALL 81
LV L A Q V LL
Sbjct: 612 LVRNLEGANQHVSKELL 628
>MGI|MGI:1925644 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1925644 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:CH466556 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AK080767 EMBL:AK133545 EMBL:AL645615 EMBL:BC029094
IPI:IPI00336965 RefSeq:NP_084372.2 UniGene:Mm.280544
ProteinModelPortal:Q8K301 SMR:Q8K301 STRING:Q8K301
PhosphoSite:Q8K301 PaxDb:Q8K301 PRIDE:Q8K301
Ensembl:ENSMUST00000049257 GeneID:78394 KEGG:mmu:78394
InParanoid:Q3UZY9 NextBio:348796 Bgee:Q8K301 CleanEx:MM_DDX52
Genevestigator:Q8K301 GermOnline:ENSMUSG00000020677 Uniprot:Q8K301
Length = 598
Score = 188 (71.2 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 39/109 (35%), Positives = 64/109 (58%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T + ARG+D V +VINY FP ++ +Y+HRIGRTG+AG +G + F T +K
Sbjct: 464 IWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKP 523
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHF-REISADAPK 108
L + NV+++A VP+ + F + K++ K+ RE PK
Sbjct: 524 LLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKKPLERESICTTPK 572
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 191 (72.3 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 36/76 (47%), Positives = 53/76 (69%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +AT +AARGLD+ ++E+V+N+ P EDYVHR+GRTG+AG+KG + F++ + A
Sbjct: 667 LLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYA 726
Query: 63 GELVNVLREARQVVPD 78
+LV L + Q VPD
Sbjct: 727 PDLVKALELSEQPVPD 742
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 192 (72.6 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 37/86 (43%), Positives = 54/86 (62%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +AT +AARGLD+ D+ +V+NY P EDYVHR GRTG+AGKKG ++ F+T A
Sbjct: 810 LLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYA 869
Query: 63 GELVNVLREARQVVPDALLKFGTHVK 88
G+++ + + ++P L T K
Sbjct: 870 GDIIRAMDLSGTLIPAELQALWTEYK 895
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 191 (72.3 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 43/109 (39%), Positives = 64/109 (58%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VAT +AARGLD+ + +V+NYS P EDYVHR GRTG+AG KG ++ F+T +
Sbjct: 657 LLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEGQARYS 716
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
G+++ L + VP L + T+ K+++ K G + S + K K
Sbjct: 717 GDILKALELSGSSVPAELEQLWTNFKEQQ-KAEGKIIKSSSGFSGKGFK 764
>UNIPROTKB|I3LIB1 [details] [associations]
symbol:LOC100625841 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00550000074997 EMBL:CU407277
Ensembl:ENSSSCT00000025578 OMA:VIAHYRE Uniprot:I3LIB1
Length = 442
Score = 185 (70.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 41/110 (37%), Positives = 65/110 (59%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V+ VIN++ P T + YVHR+GRT +AG+ G S + + + E
Sbjct: 164 VATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKE 223
Query: 65 LVNVLR---EARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
+V + +AR + D +LKF ++K E +Y ++ A+ + +K
Sbjct: 224 IVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAV--LQLEAEEKEMQK 271
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 189 (71.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 44/94 (46%), Positives = 58/94 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A RG+DI DV +V+NY EDY+HRIGRTG+AGK GV+ FLT + A+ E
Sbjct: 718 VATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYE 777
Query: 65 LVNVLREAR------QVV--PDALLKFGTHVKKK 90
L + E+ ++ PDA K GT + KK
Sbjct: 778 LKQAILESPVSSCPPELANHPDAQHKPGTILTKK 811
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 189 (71.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 44/94 (46%), Positives = 58/94 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A RG+DI DV +V+NY EDY+HRIGRTG+AGK GV+ FLT + A+ E
Sbjct: 719 VATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYE 778
Query: 65 LVNVLREAR------QVV--PDALLKFGTHVKKK 90
L + E+ ++ PDA K GT + KK
Sbjct: 779 LKQAILESPVSSCPPELANHPDAQHKPGTILTKK 812
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 189 (71.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 44/94 (46%), Positives = 58/94 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A RG+DI DV +V+NY EDY+HRIGRTG+AGK GV+ FLT + A+ E
Sbjct: 719 VATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYE 778
Query: 65 LVNVLREAR------QVV--PDALLKFGTHVKKK 90
L + E+ ++ PDA K GT + KK
Sbjct: 779 LKQAILESPVSSCPPELANHPDAQHKPGTILTKK 812
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 189 (71.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 44/94 (46%), Positives = 58/94 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A RG+DI DV +V+NY EDY+HRIGRTG+AGK GV+ FLT + A+ E
Sbjct: 719 VATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYE 778
Query: 65 LVNVLREAR------QVV--PDALLKFGTHVKKK 90
L + E+ ++ PDA K GT + KK
Sbjct: 779 LKQAILESPVSSCPPELANHPDAQHKPGTILTKK 812
>DICTYBASE|DDB_G0274325 [details] [associations]
symbol:ddx52 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0274325 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0003723
EMBL:AAFI02000012 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K14779 RefSeq:XP_643949.1
ProteinModelPortal:Q86IZ9 EnsemblProtists:DDB0234211 GeneID:8619377
KEGG:ddi:DDB_G0274325 OMA:NGITSHE Uniprot:Q86IZ9
Length = 668
Score = 187 (70.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 38/112 (33%), Positives = 67/112 (59%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T++ ARG+D V VIN+ FP T Y+HRIGRTG+AG+ GV++ T+ +
Sbjct: 491 IWVLICTELMARGMDFKGVNFVINFDFPHTLASYIHRIGRTGRAGRPGVAYTLYTDADTP 550
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKES-KLYGAHFREISADAPKAKK 111
+ +V+ ++++ VPD +L KKK+ +L G RE + P +++
Sbjct: 551 MLPTIVHAMKQSGSHVPDWMLNLKVQGKKKQQYRLKGVE-RESFSTIPLSER 601
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 189 (71.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 35/73 (47%), Positives = 50/73 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI +++ VIN+ P +DY+HRIGRTG+AG G++ F+ NK + +
Sbjct: 700 VATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAGNIGIATSFVNEDNKNIFKD 759
Query: 65 LVNVLREARQVVP 77
L+ L E Q +P
Sbjct: 760 LLATLEECNQQIP 772
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 189 (71.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 35/73 (47%), Positives = 50/73 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI +++ VIN+ P +DY+HRIGRTG+AG G++ F+ NK + +
Sbjct: 700 VATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAGNIGIATSFVNEDNKNIFKD 759
Query: 65 LVNVLREARQVVP 77
L+ L E Q +P
Sbjct: 760 LLATLEECNQQIP 772
>ZFIN|ZDB-GENE-060623-1 [details] [associations]
symbol:ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
52" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-060623-1
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11056 HOVERGEN:HBG051332 KO:K14779
OrthoDB:EOG4XKV6Q EMBL:BC117610 IPI:IPI00627696
RefSeq:NP_001037780.1 UniGene:Dr.13799 ProteinModelPortal:Q1ECZ5
STRING:Q1ECZ5 GeneID:407696 KEGG:dre:407696 NextBio:20818558
Uniprot:Q1ECZ5
Length = 606
Score = 186 (70.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 38/94 (40%), Positives = 59/94 (62%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T + ARG+D + +VINY FP + +Y+HRIGRTG+AG KG + F T +K
Sbjct: 465 IWVLICTALLARGIDFKGINLVINYDFPTSAVEYIHRIGRTGRAGHKGKAVTFFTEDDKP 524
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKL 94
L + V+++A VPD ++ F KK +SKL
Sbjct: 525 LLRSIATVIKKAGCPVPDYMIGF----KKIKSKL 554
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 183 (69.5 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 35/75 (46%), Positives = 53/75 (70%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT++AARGLDIP +E V+N+ P EDYVHRIGRTG+AGK GV+ F++ + +
Sbjct: 299 VATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLAD 358
Query: 65 LVNVL-REARQV-VP 77
+ ++ ++ R++ VP
Sbjct: 359 IEKLIGQKIRRITVP 373
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 187 (70.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 36/73 (49%), Positives = 49/73 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDIP V+ VIN+ P E+YVHRIGRTG+ G GV+ F N+ + +
Sbjct: 614 VATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSD 673
Query: 65 LVNVLREARQVVP 77
L+ +L E +Q +P
Sbjct: 674 LLELLIETKQEIP 686
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 185 (70.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 40/90 (44%), Positives = 56/90 (62%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F + N + +
Sbjct: 528 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKD 587
Query: 65 LVNVLREARQVVPDALLKFG-THVKKKESK 93
L+++L EA+Q VP L H K S+
Sbjct: 588 LLDILVEAKQEVPSWLESLAYEHQHKSSSR 617
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 185 (70.2 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 43/86 (50%), Positives = 57/86 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFL-TNHNKALAG 63
VAT +AARGLDI +V+ VIN+ P T ++YVHRIGRTG+ G G + F T+ + LA
Sbjct: 568 VATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSDNHLAQ 627
Query: 64 ELVNVLREARQVVPDAL--LKFGTHV 87
LV VL +A+Q VP L + F T+V
Sbjct: 628 PLVKVLSDAQQDVPAWLEEIAFSTYV 653
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 185 (70.2 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F + N +
Sbjct: 542 IMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYNDKNSNIT 601
Query: 63 GELVNVLREARQVVPDAL 80
+L+++L EA+Q VP L
Sbjct: 602 KDLLDILVEAKQEVPSWL 619
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 185 (70.2 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 41/110 (37%), Positives = 65/110 (59%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V+ VIN++ P T + YVHR+GRT +AG+ G S + + + E
Sbjct: 487 VATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKE 546
Query: 65 LVNVLR---EARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
+V + +AR + D +LKF ++K E +Y ++ A+ + +K
Sbjct: 547 IVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAV--LQLEAEEKEMQK 594
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 180 (68.4 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 39/86 (45%), Positives = 54/86 (62%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 241 VATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKD 300
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + + H K
Sbjct: 301 LLDLLVEAKQEVPSWLENMAYEHHYK 326
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 184 (69.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V+ VIN++ P TT+ YVHR+GRT +AG+ G S + + + E
Sbjct: 480 VATDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKE 539
Query: 65 LVNVLR---EARQVVPDALLKFGTHVKKKESKLY 95
+V + +AR + D +LKF ++ E +Y
Sbjct: 540 IVKAAKTPVKARILPQDVILKFREKIENLEKDVY 573
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 184 (69.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V+ VIN++ P TT+ YVHR+GRT +AG+ G S + + + E
Sbjct: 481 VATDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKE 540
Query: 65 LVNVLR---EARQVVPDALLKFGTHVKKKESKLY 95
+V + +AR + D +LKF ++ E +Y
Sbjct: 541 IVKAAKTPVKARILPQDVILKFREKIENLEKDVY 574
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 184 (69.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V+ VIN++ P T + YVHR+GRT +AG+ G S + + + E
Sbjct: 484 VATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKE 543
Query: 65 LVNVLR---EARQVVPDALLKFGTHVKKKESKLY 95
+V + +AR + D +LKF ++K E +Y
Sbjct: 544 IVKAAKAPVKARILPQDVILKFRDKIEKLEKDVY 577
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 184 (69.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+AT +A RGLDI V+ VINY P +DY+HRIGRTG+ G G + F++ + +L E
Sbjct: 661 IATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE-DCSLLSE 719
Query: 65 LVNVLREARQVVPD 78
LV VL +A+Q+VPD
Sbjct: 720 LVGVLADAQQIVPD 733
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 184 (69.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+AT +A RGLDI V+ VINY P +DY+HRIGRTG+ G G + F++ + +L E
Sbjct: 661 IATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISE-DCSLLSE 719
Query: 65 LVNVLREARQVVPD 78
LV VL +A+Q+VPD
Sbjct: 720 LVGVLADAQQIVPD 733
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 184 (69.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V+ VIN++ P T + YVHR+GRT +AG+ G S + + + E
Sbjct: 487 VATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKE 546
Query: 65 LVNVLR---EARQVVPDALLKFGTHVKKKESKLY 95
+V + +AR + D +LKF ++K E +Y
Sbjct: 547 IVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 580
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 183 (69.5 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 40/86 (46%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 494 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKD 553
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + F H K
Sbjct: 554 LLDLLVEAKQEVPSWLENMAFEHHYK 579
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 183 (69.5 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 40/86 (46%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 495 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKD 554
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + F H K
Sbjct: 555 LLDLLVEAKQEVPSWLENMAFEHHYK 580
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 183 (69.5 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 40/86 (46%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 496 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKD 555
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + F H K
Sbjct: 556 LLDLLVEAKQEVPSWLENMAFEHHYK 581
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 183 (69.5 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 40/86 (46%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 496 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKD 555
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + F H K
Sbjct: 556 LLDLLVEAKQEVPSWLENMAFEHHYK 581
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 184 (69.8 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 43/105 (40%), Positives = 61/105 (58%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A RG+D+PDV +VIN++ + E Y HRIGRTG+AGK GV+ FL N + + +
Sbjct: 676 VATDLAGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYD 735
Query: 65 LVNVL-REARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPK 108
L +L + VP+ L K + K ++ G E S A K
Sbjct: 736 LKQMLIKSPISRVPEELRKHEA-AQSKPTRGAGKKIEEASGFAGK 779
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 184 (69.8 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V+ VIN++ P T + YVHR+GRT +AG+ G S + + + E
Sbjct: 508 VATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKE 567
Query: 65 LVNVLR---EARQVVPDALLKFGTHVKKKESKLY 95
+V + +AR + D +LKF ++K E +Y
Sbjct: 568 IVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 601
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 183 (69.5 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 42/100 (42%), Positives = 60/100 (60%)
Query: 2 YLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKK-GVSHPFLTNHNKA 60
++ +ATD+AARGLDI ++ V+NY + +VHRIGRTG+AG + GV++ +T
Sbjct: 525 HVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREAR 584
Query: 61 LAGELVNVLREARQVVP----DALLKFGTHVKKKESKLYG 96
AGELVN L A Q VP D +K G K++ + G
Sbjct: 585 FAGELVNSLVAAGQNVPPELTDLAMKDGRFKSKRDGRKGG 624
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 182 (69.1 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 496 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNANITKD 555
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + + H K
Sbjct: 556 LLDLLVEAKQEVPSWLENMAYEHHYK 581
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 183 (69.5 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V+ VIN++ P T + YVHR+GRT +AG+ G S + + + E
Sbjct: 518 VATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKE 577
Query: 65 LVNVLR---EARQVVPDALLKFGTHVKKKESKLY 95
+V + +AR + D +LKF ++K E +Y
Sbjct: 578 IVKAAKAPVKARILPQDVILKFRDKIEKMEKDVY 611
>DICTYBASE|DDB_G0270396 [details] [associations]
symbol:ddx49 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0270396 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:FRNLCAI
RefSeq:XP_646762.1 HSSP:P60842 ProteinModelPortal:Q55BR9
PRIDE:Q55BR9 EnsemblProtists:DDB0234206 GeneID:8617735
KEGG:ddi:DDB_G0270396 ProtClustDB:CLSZ2846935 Uniprot:Q55BR9
Length = 508
Score = 180 (68.4 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 36/100 (36%), Positives = 63/100 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A+RGLDIPDV++VINY +++DY+HR+GRT + G+ G + F+T H+ +L
Sbjct: 300 VATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVGRTARFGRSGRAISFITPHDVSLIKG 359
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKES--KLYGAHFREI 102
+ ++++ ++ + H+K+ + K+ H EI
Sbjct: 360 IEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEIHLDEI 399
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 183 (69.5 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A RG+DI DV +V+NY EDY+HRIGRTG+AGK GV+ FLT + ++ +
Sbjct: 706 VATDVAGRGIDIQDVSMVLNYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKEDSSVFYD 765
Query: 65 LVNVLREARQVV--------PDALLKFGTHVKKK 90
L + E+ PDA K GT + KK
Sbjct: 766 LKQAILESPVSTCPPELANHPDAQHKPGTILTKK 799
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 181 (68.8 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 489 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKD 548
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + + H K
Sbjct: 549 LLDLLVEAKQEVPSWLESMAYEHHYK 574
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 181 (68.8 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 495 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKD 554
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + + H K
Sbjct: 555 LLDLLVEAKQEVPSWLESMAYEHHYK 580
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 181 (68.8 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 47/109 (43%), Positives = 61/109 (55%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT-NHNKALAG 63
VAT +AARGLDI +V+ VIN+ P T ++YVHRIGRTG+ G G + F + LA
Sbjct: 575 VATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQ 634
Query: 64 ELVNVLREARQVVPDAL--LKFGTHVKKKESKLYGAHFREISADAPKAK 110
LV VL +A+Q VP L + F T++ G F S D K K
Sbjct: 635 PLVKVLTDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFA--SVDTRKGK 681
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 181 (68.8 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 47/109 (43%), Positives = 61/109 (55%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT-NHNKALAG 63
VAT +AARGLDI +V+ VIN+ P T ++YVHRIGRTG+ G G + F + LA
Sbjct: 593 VATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQ 652
Query: 64 ELVNVLREARQVVPDAL--LKFGTHVKKKESKLYGAHFREISADAPKAK 110
LV VL +A+Q VP L + F T++ G F S D K K
Sbjct: 653 PLVKVLTDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFA--SVDTRKGK 699
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 181 (68.8 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 47/109 (43%), Positives = 61/109 (55%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT-NHNKALAG 63
VAT +AARGLDI +V+ VIN+ P T ++YVHRIGRTG+ G G + F + LA
Sbjct: 595 VATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQ 654
Query: 64 ELVNVLREARQVVPDAL--LKFGTHVKKKESKLYGAHFREISADAPKAK 110
LV VL +A+Q VP L + F T++ G F S D K K
Sbjct: 655 PLVKVLTDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFA--SVDTRKGK 701
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 181 (68.8 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 47/109 (43%), Positives = 61/109 (55%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT-NHNKALAG 63
VAT +AARGLDI +V+ VIN+ P T ++YVHRIGRTG+ G G + F + LA
Sbjct: 596 VATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQ 655
Query: 64 ELVNVLREARQVVPDAL--LKFGTHVKKKESKLYGAHFREISADAPKAK 110
LV VL +A+Q VP L + F T++ G F S D K K
Sbjct: 656 PLVKVLTDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFA--SVDTRKGK 702
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 178 (67.7 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 35/77 (45%), Positives = 54/77 (70%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNH-NKALAG 63
VATD+A++GLD P ++ V+NY P E+YVHRIGRTG++GK G++ F+ ++++
Sbjct: 338 VATDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLM 397
Query: 64 ELVNVLREARQVVPDAL 80
+L +L EA+Q VP L
Sbjct: 398 DLKALLVEAKQKVPPVL 414
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 180 (68.4 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 39/86 (45%), Positives = 54/86 (62%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 491 VATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKD 550
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + + H K
Sbjct: 551 LLDLLVEAKQEVPSWLENMAYEHHYK 576
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 180 (68.4 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 39/86 (45%), Positives = 54/86 (62%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 494 VATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKD 553
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + + H K
Sbjct: 554 LLDLLVEAKQEVPSWLENMAYEHHYK 579
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 180 (68.4 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 495 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKD 554
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + + H K
Sbjct: 555 LLDLLVEAKQEVPSWLENMAYEHHYK 580
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 180 (68.4 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 496 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKD 555
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + + H K
Sbjct: 556 LLDLLVEAKQEVPSWLENMAYEHHYK 581
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 180 (68.4 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 496 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKD 555
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + + H K
Sbjct: 556 LLDLLVEAKQEVPSWLENMAYEHHYK 581
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 183 (69.5 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+AT +AARGLD+ +++V+NY P EDYVHR GRTG+AG G + FLT + + +
Sbjct: 848 IATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVD 907
Query: 65 LVNVLREARQVVPDALLK 82
+ L+++ Q VP+A+ K
Sbjct: 908 IAKALKQSGQEVPEAVQK 925
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 177 (67.4 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 37/119 (31%), Positives = 67/119 (56%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLDIP V+VV+N+ P ++DY+HR+GRT +AG+ G + F+T ++ L
Sbjct: 318 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQR 377
Query: 65 LVNVLREARQVVP--DALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDDQG 121
+ +++ + V P D + T + + RE + ++ P ++ D +G
Sbjct: 378 IEHLIGKKLPVFPTQDEEVMMLTERVSEAQRFARMELREHGEKKKRKREDPGDDDDTEG 436
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 180 (68.4 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 540 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKD 599
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + + H K
Sbjct: 600 LLDLLVEAKQEVPSWLENMAYEHHYK 625
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 182 (69.1 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 39/99 (39%), Positives = 58/99 (58%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+AT + ARGLD+ +++V+NY P EDYVHR+GRTG+AG GV+ F+T + A +
Sbjct: 723 IATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVD 782
Query: 65 LVNVLREARQVVPDALL----KFGTHVKKKESKLYGAHF 99
+ L+ ++Q VP L +F VK + K G F
Sbjct: 783 IAKALKMSKQPVPKELQTLASQFLEKVKAGKEKAAGGGF 821
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 176 (67.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/91 (39%), Positives = 58/91 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARG+D+PD+ VIN+ P + + Y+HRIGRTG+AGKKG++ + H++ +
Sbjct: 301 LATDVAARGIDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLVEAHDQPMMAR 360
Query: 65 LVNVLRE-ARQVVPDALL-KFGTHVKKKESK 93
+ ++E ++ D L K V KK+ K
Sbjct: 361 VERYIKEEVKERFIDGLRPKHKKPVFKKKKK 391
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 176 (67.0 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/91 (39%), Positives = 58/91 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARG+D+PD+ VIN+ P + + Y+HRIGRTG+AGKKG++ + H++ +
Sbjct: 301 LATDVAARGIDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLVEAHDQPMMAR 360
Query: 65 LVNVLRE-ARQVVPDALL-KFGTHVKKKESK 93
+ ++E ++ D L K V KK+ K
Sbjct: 361 VERYIKEEVKERFIDGLRPKHKKPVFKKKKK 391
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 179 (68.1 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 473 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKD 532
Query: 65 LVNVLREARQVVPDAL 80
L+++L EA+Q VP L
Sbjct: 533 LLDLLVEAKQEVPSWL 548
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 179 (68.1 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N + +
Sbjct: 474 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKD 533
Query: 65 LVNVLREARQVVPDAL 80
L+++L EA+Q VP L
Sbjct: 534 LLDLLVEAKQEVPSWL 549
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 179 (68.1 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 39/86 (45%), Positives = 56/86 (65%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G++ F N ++ +
Sbjct: 496 VATAVAARGLDISNVKHVINFDLPGDIEEYVHRIGRTGRVGNLGLATSFFNERNINISKD 555
Query: 65 LVNVLREARQVVPDAL--LKFGTHVK 88
L+++L EA+Q VP L + + H K
Sbjct: 556 LLDLLVEAKQEVPSWLENMAYEHHYK 581
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 179 (68.1 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATDIA RG+DIP+V +V+NY+ + EDY HRIGRTG+AGK G + FL + + +
Sbjct: 571 VATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYD 630
Query: 65 L-VNVLREARQVVPDAL 80
L V + R A+ +PD L
Sbjct: 631 LRVLLSRSAKAHIPDEL 647
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 181 (68.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 38/79 (48%), Positives = 52/79 (65%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPF-LTNHNKALAG 63
VAT +AARGLD+ ++ +V+NY P EDYVHR+GRTG+AG+KG ++ F L H + +AG
Sbjct: 607 VATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEHQEKMAG 666
Query: 64 ELVNVLREARQVVPDALLK 82
E+ E P A LK
Sbjct: 667 EICRAF-ETAGCKPPADLK 684
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 179 (68.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 39/74 (52%), Positives = 51/74 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFL-TNHNKALAG 63
VAT +AARGLDI +V+ VIN++ P T ++YVHRIGRTG+ G G + F T + LA
Sbjct: 580 VATSVAARGLDIENVQHVINFNLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQ 639
Query: 64 ELVNVLREARQVVP 77
LV VL +A+Q VP
Sbjct: 640 PLVKVLSDAQQDVP 653
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 179 (68.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 39/74 (52%), Positives = 51/74 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFL-TNHNKALAG 63
VAT +AARGLDI +V+ VIN++ P T ++YVHRIGRTG+ G G + F T + LA
Sbjct: 580 VATSVAARGLDIENVQHVINFNLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQ 639
Query: 64 ELVNVLREARQVVP 77
LV VL +A+Q VP
Sbjct: 640 PLVKVLSDAQQDVP 653
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VA+D+AARGLDIPDV V N+ P EDYVHRIGRTG+AG+ G S+ +T +
Sbjct: 301 LLVASDVAARGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAGRTGESYTVVTPADDKSW 360
Query: 63 GELVNVLR-EARQVVPDALLK 82
G +V +++ + + +P+ LL+
Sbjct: 361 GFVVKMIKKDVPEFMPEGLLE 381
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 175 (66.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 38/94 (40%), Positives = 55/94 (58%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VATD+AARGLDIPDV VIN+ P E Y+HRIGRTG+AG++G + + + L
Sbjct: 292 LLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLL 351
Query: 63 GELVNVL--REARQVVPDALLKFGTHVKKKESKL 94
+ + R R+++P+ + KK K+
Sbjct: 352 KAIEEAINKRLKREILPEPVDLEEARFKKIAKKI 385
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 175 (66.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 38/94 (40%), Positives = 55/94 (58%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VATD+AARGLDIPDV VIN+ P E Y+HRIGRTG+AG++G + + + L
Sbjct: 292 LLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLL 351
Query: 63 GELVNVL--REARQVVPDALLKFGTHVKKKESKL 94
+ + R R+++P+ + KK K+
Sbjct: 352 KAIEEAINKRLKREILPEPVDLEEARFKKIAKKI 385
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 179 (68.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V+ VIN++ P T + YVHR+GRT +AGK G S + + + E
Sbjct: 501 VATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGRSVSLVGETERKMLKE 560
Query: 65 LVNVLR---EARQVVPDALLKFGTHVKKKESKLY 95
+V + +AR + + +LKF ++K E +Y
Sbjct: 561 IVKKAKFPVKARVIPQEVILKFRDLIEKLEKDVY 594
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 177 (67.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 38/74 (51%), Positives = 49/74 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA-LAG 63
VAT +A+RGLDI +V+ VIN+ P T EDYVHRIGRTG+ G G + F + + L
Sbjct: 474 VATSVASRGLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDGHLVQ 533
Query: 64 ELVNVLREARQVVP 77
L+ VL EA+Q VP
Sbjct: 534 SLLKVLSEAQQEVP 547
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 178 (67.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 39/74 (52%), Positives = 50/74 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFL-TNHNKALAG 63
VAT +AARGLDI +V+ VIN+ P T ++YVHRIGRTG+ G G + F T + LA
Sbjct: 569 VATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQ 628
Query: 64 ELVNVLREARQVVP 77
LV VL +A+Q VP
Sbjct: 629 PLVKVLSDAQQDVP 642
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 179 (68.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 45/101 (44%), Positives = 61/101 (60%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A RG+DI DV +VINY T EDY HRIGRTG+AGK G + F+T + AL +
Sbjct: 721 VATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSALFYD 780
Query: 65 LVNVLREAR------QVV--PDALLKFGTHVKKK--ESKLY 95
L + + +++ P+A K GT V KK E K++
Sbjct: 781 LKQCVSASPVSTCPPELMNHPEAQHKPGTVVTKKRREEKIF 821
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 175 (66.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 37/120 (30%), Positives = 69/120 (57%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLDIP V+VV+N+ P ++DY+HR+GRT +AG+ G + F+T ++ L
Sbjct: 320 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQR 379
Query: 65 LVNVLREARQVVP---DALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDDQG 121
+ +++ + V P D ++ V + + + RE ++++ +N D +G
Sbjct: 380 IEHLIGKKLPVFPTQDDEVMMLTERVTEAQ-RFARMELREHGEKKKRSREDVGDNDDTEG 438
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 178 (67.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 42/86 (48%), Positives = 55/86 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT-NHNKALAG 63
VAT +AARGLDI +V+ VIN+ P T ++YVHRIGRTG+ G G + F + LA
Sbjct: 596 VATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDPESDNHLAQ 655
Query: 64 ELVNVLREARQVVPDAL--LKFGTHV 87
LV VL +A+Q VP L + F T+V
Sbjct: 656 PLVKVLSDAQQDVPAWLEEIAFSTYV 681
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 175 (66.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 37/120 (30%), Positives = 68/120 (56%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLDIP V+VV+N+ P ++DY+HR+GRT +AG+ G + F+T ++ L
Sbjct: 344 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQR 403
Query: 65 LVNVLREARQVVP---DALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDDQG 121
+ +++ + V P D ++ V + + + RE + ++ +N D +G
Sbjct: 404 IEHLIGKKLPVFPTQDDEVMMLTERVTEAQ-RFARMELREHGEKKKRTREDAGDNDDTEG 462
>TIGR_CMR|CPS_4097 [details] [associations]
symbol:CPS_4097 "ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K05590
ProtClustDB:PRK11192 RefSeq:YP_270752.2 ProteinModelPortal:Q47WS0
STRING:Q47WS0 PRIDE:Q47WS0 GeneID:3520098 KEGG:cps:CPS_4097
PATRIC:21471063 OMA:YLDKGHF BioCyc:CPSY167879:GI48-4110-MONOMER
Uniprot:Q47WS0
Length = 430
Score = 174 (66.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 40/109 (36%), Positives = 63/109 (57%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI D+ VIN+ P + Y+HRIGRTG+AGKKG + + H+ + G+
Sbjct: 312 VATDVAARGLDIDDISHVINFDMPRKVDIYIHRIGRTGRAGKKGTAISLVEAHDMGVIGK 371
Query: 65 LVNVLRE--ARQVVPDALLKFGTHVKKKESKLYGAHFR-EISADAPKAK 110
+ +E +R+ + + K KES++ + +++ KAK
Sbjct: 372 IERYTKERLSRRFIQEL------RPKNKESRVVNKKAKIKLTTSQKKAK 414
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 174 (66.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 30/54 (55%), Positives = 43/54 (79%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHN 58
VATD+AARGLDIP V+VV N+ P+ ++ Y+HR+GRT +AGK GV+ F+T ++
Sbjct: 340 VATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVTQYD 393
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 179 (68.1 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A RG+D+ V++VIN+ P E Y HRIGRTG+AG KG++ F+T H+ L +
Sbjct: 1022 VATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFITEHDSHLFYD 1081
Query: 65 LVNVLREARQVVP 77
L L + +VP
Sbjct: 1082 LKQFLISSNNIVP 1094
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 179 (68.1 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A RG+D+ V++VIN+ P E Y HRIGRTG+AG KG++ F+T H+ L +
Sbjct: 1022 VATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFITEHDSHLFYD 1081
Query: 65 LVNVLREARQVVP 77
L L + +VP
Sbjct: 1082 LKQFLISSNNIVP 1094
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARG+DIP+V +VINY ++Y+HRIGRTG+AG G S F+++ + +
Sbjct: 496 IATDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEIFTP 555
Query: 65 LVNVLREARQVVPDALLK 82
L L++ + +PD L K
Sbjct: 556 LKKFLKKGGKRLPDWLYK 573
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARG+DIP+V +VINY ++Y+HRIGRTG+AG G S F+++ + +
Sbjct: 496 IATDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEIFTP 555
Query: 65 LVNVLREARQVVPDALLK 82
L L++ + +PD L K
Sbjct: 556 LKKFLKKGGKRLPDWLYK 573
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 173 (66.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 38/118 (32%), Positives = 66/118 (55%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLDIP V+VV+N+ P ++DY+HR+GRT +AG+ G + F+T ++ L
Sbjct: 318 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQR 377
Query: 65 LVNVLREARQVVP--DALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDDQ 120
+ +++ + V P D + T + + RE + K K+ + DD+
Sbjct: 378 IEHLIGKKLPVFPTQDEEVMMLTERVNEAQRFARMELRE-HGEKKKRKREDAGDDDDK 434
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 175 (66.7 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNH-NKALAG 63
VATD+A++GLD P ++ VINY P E+YVHRIGRTG++G G++ F+ ++++
Sbjct: 483 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLM 542
Query: 64 ELVNVLREARQVVPDAL 80
+L +L EA+Q VP L
Sbjct: 543 DLKALLLEAKQKVPPVL 559
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 175 (66.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNH-NKALAG 63
VATD+A++GLD P ++ VINY P E+YVHRIGRTG++G G++ F+ ++++
Sbjct: 486 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLM 545
Query: 64 ELVNVLREARQVVPDAL 80
+L +L EA+Q VP L
Sbjct: 546 DLKALLLEAKQKVPPVL 562
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 175 (66.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNH-NKALAG 63
VATD+A++GLD P ++ VINY P E+YVHRIGRTG++G G++ F+ ++++
Sbjct: 487 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLM 546
Query: 64 ELVNVLREARQVVPDAL 80
+L +L EA+Q VP L
Sbjct: 547 DLKALLLEAKQKVPPVL 563
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 175 (66.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNH-NKALAG 63
VATD+A++GLD P ++ VINY P E+YVHRIGRTG++G G++ F+ ++++
Sbjct: 487 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLM 546
Query: 64 ELVNVLREARQVVPDAL 80
+L +L EA+Q VP L
Sbjct: 547 DLKALLLEAKQKVPPVL 563
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 175 (66.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNH-NKALAG 63
VATD+A++GLD P ++ VINY P E+YVHRIGRTG++G G++ F+ ++++
Sbjct: 487 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLM 546
Query: 64 ELVNVLREARQVVPDAL 80
+L +L EA+Q VP L
Sbjct: 547 DLKALLLEAKQKVPPVL 563
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 175 (66.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNH-NKALAG 63
VATD+A++GLD P ++ VINY P E+YVHRIGRTG++G G++ F+ ++++
Sbjct: 487 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLM 546
Query: 64 ELVNVLREARQVVPDAL 80
+L +L EA+Q VP L
Sbjct: 547 DLKALLLEAKQKVPPVL 563
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 175 (66.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNH-NKALAG 63
VATD+A++GLD P ++ VINY P E+YVHRIGRTG++G G++ F+ ++++
Sbjct: 487 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLM 546
Query: 64 ELVNVLREARQVVPDAL 80
+L +L EA+Q VP L
Sbjct: 547 DLKALLLEAKQKVPPVL 563
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 175 (66.7 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNH-NKALAG 63
VATD+A++GLD P ++ VINY P E+YVHRIGRTG++G G++ F+ ++++
Sbjct: 505 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLM 564
Query: 64 ELVNVLREARQVVPDAL 80
+L +L EA+Q VP L
Sbjct: 565 DLKALLLEAKQKVPPVL 581
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 175 (66.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNH-NKALAG 63
VATD+A++GLD P ++ VINY P E+YVHRIGRTG++G G++ F+ ++++
Sbjct: 514 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLM 573
Query: 64 ELVNVLREARQVVPDAL 80
+L +L EA+Q VP L
Sbjct: 574 DLKALLLEAKQKVPPVL 590
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 176 (67.0 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI ++ VIN+ + +VHRIGRTG+AG KG ++ +T + + G
Sbjct: 565 VATDVAARGLDISEIRTVINFDMARDIDTHVHRIGRTGRAGHKGTAYTLVTEKDIEMVGH 624
Query: 65 LVNVLREARQVVPDALL 81
LV L Q VP L+
Sbjct: 625 LVKNLESVSQEVPKPLM 641
>UNIPROTKB|F1NQA6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 EMBL:AADN02025730
IPI:IPI00822952 Ensembl:ENSGALT00000039070 ArrayExpress:F1NQA6
Uniprot:F1NQA6
Length = 603
Score = 174 (66.3 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 35/93 (37%), Positives = 54/93 (58%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T + ARG+D V +VINY P + +Y+HRIGRTG+AG G + F T +K
Sbjct: 457 IWVLICTALLARGIDFKGVNMVINYDLPTSAVEYIHRIGRTGRAGHTGKAVTFFTEDDKP 516
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESK 93
L + NV++ A VPD + F K++ K
Sbjct: 517 LLRSIANVIQRAGCPVPDYIKHFPKLQSKQKKK 549
>UNIPROTKB|E1C4M1 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AADN02025730 IPI:IPI00593921 ProteinModelPortal:E1C4M1
Ensembl:ENSGALT00000008815 ArrayExpress:E1C4M1 Uniprot:E1C4M1
Length = 604
Score = 174 (66.3 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 35/93 (37%), Positives = 54/93 (58%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T + ARG+D V +VINY P + +Y+HRIGRTG+AG G + F T +K
Sbjct: 458 IWVLICTALLARGIDFKGVNMVINYDLPTSAVEYIHRIGRTGRAGHTGKAVTFFTEDDKP 517
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESK 93
L + NV++ A VPD + F K++ K
Sbjct: 518 LLRSIANVIQRAGCPVPDYIKHFPKLQSKQKKK 550
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 177 (67.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ +AT +AARGLD+ +++V+NY P EDYVHR GRTG+AG G + F+T + A
Sbjct: 681 VMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTEEQENCA 740
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKK 90
+ L ++ Q VP+ L++ ++K
Sbjct: 741 IGIAKALEQSGQPVPEKLIEMRKAFREK 768
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 174 (66.3 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFL--TNHNKALA 62
VATD+A++GLD P+V+ VINY P E+YVHRIGRTG++ KG++ + T L
Sbjct: 483 VATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLL 542
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAH 98
+L ++L E +Q VPD L + + + L +H
Sbjct: 543 -DLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDSH 577
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 175 (66.7 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 41/85 (48%), Positives = 54/85 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT-NHNKALAG 63
VAT +AARGLDI +V+ VIN+ P T ++YVHRIGRTG+ G G + F + LA
Sbjct: 597 VATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLAQ 656
Query: 64 ELVNVLREARQVVPDAL--LKFGTH 86
LV VL +A+Q VP L + F T+
Sbjct: 657 PLVKVLSDAQQDVPAWLEEIAFSTY 681
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 175 (66.7 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 41/85 (48%), Positives = 54/85 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT-NHNKALAG 63
VAT +AARGLDI +V+ VIN+ P T ++YVHRIGRTG+ G G + F + LA
Sbjct: 597 VATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLAQ 656
Query: 64 ELVNVLREARQVVPDAL--LKFGTH 86
LV VL +A+Q VP L + F T+
Sbjct: 657 PLVKVLSDAQQDVPAWLEEIAFSTY 681
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 174 (66.3 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 34/77 (44%), Positives = 54/77 (70%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNK-ALAG 63
VATD+A++GLD +E VIN+ P E+YVHRIGRTG++G+KG++ F+ ++ ++
Sbjct: 496 VATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLS 555
Query: 64 ELVNVLREARQVVPDAL 80
+L +L EA Q +P+ L
Sbjct: 556 DLKQLLAEAGQELPEFL 572
>UNIPROTKB|I3LQ10 [details] [associations]
symbol:LOC100626268 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 Ensembl:ENSSSCT00000028964 OMA:RYLVALC
Uniprot:I3LQ10
Length = 684
Score = 174 (66.3 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 42/107 (39%), Positives = 62/107 (57%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V+ VIN++ P T + YVHR+GRT +AG+ G S L KA
Sbjct: 517 VATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLLKEIVKAAKAP 576
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKK 111
+ +AR + D +LKF ++K E +Y ++ A+ + +K
Sbjct: 577 V-----KARILPQDVILKFRDKIEKMEKDVYAV--LQLEAEEKEMQK 616
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 174 (66.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 40/85 (47%), Positives = 52/85 (61%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA-LAG 63
VAT +AARGLDI V+ V+N+ P + ++YVHRIGRTG+ G G + F + LA
Sbjct: 584 VATSVAARGLDIEQVQHVVNFDMPSSIDEYVHRIGRTGRCGNTGRAVSFFNPESDTPLAR 643
Query: 64 ELVNVLREARQVVPDAL--LKFGTH 86
LV VL A+QVVP L + F H
Sbjct: 644 SLVKVLSGAQQVVPKWLEEVAFSAH 668
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 174 (66.3 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+A RG+D+ DV +V+NY + EDY HRIGRTG+AGK G + FLT + A+ +
Sbjct: 628 VATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFD 687
Query: 65 LVNVLREA 72
L VL E+
Sbjct: 688 LKQVLVES 695
>FB|FBgn0036754 [details] [associations]
symbol:CG5589 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00550000074863 KO:K14779 OMA:NVMKQSG
RefSeq:NP_649009.1 ProteinModelPortal:Q9VVK8 SMR:Q9VVK8
STRING:Q9VVK8 PRIDE:Q9VVK8 EnsemblMetazoa:FBtr0075170 GeneID:39979
KEGG:dme:Dmel_CG5589 UCSC:CG5589-RA FlyBase:FBgn0036754
InParanoid:Q9VVK8 OrthoDB:EOG4QBZMN PhylomeDB:Q9VVK8
GenomeRNAi:39979 NextBio:816380 Bgee:Q9VVK8 Uniprot:Q9VVK8
Length = 594
Score = 172 (65.6 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 33/94 (35%), Positives = 58/94 (61%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ + T++ RG+D V +VINY FP TT Y+HRIGRTG+AG+ G + F T + +
Sbjct: 417 IWVLICTELMGRGIDFKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTS 476
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKL 94
+ +++ + VP+ +L+ V+K E+K+
Sbjct: 477 NLRGIALIIKNSGGTVPEYMLQM-KKVRKSEAKM 509
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 170 (64.9 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 31/73 (42%), Positives = 50/73 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLDIP V+VVIN+ P ++DY+HR+GRT +AG+ G S F+T ++ L
Sbjct: 319 LATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQR 378
Query: 65 LVNVLREARQVVP 77
+ +++ + P
Sbjct: 379 IEHLIGKKLPAFP 391
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 170 (64.9 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 30/46 (65%), Positives = 37/46 (80%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVS 50
VATD+AARGLDIPD+ V+N+ P EDYVHR+GRTG+AGK G +
Sbjct: 316 VATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGKSGTA 361
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 172 (65.6 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 39/85 (45%), Positives = 51/85 (60%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT-NHNKALAG 63
V T +AARGLDI +V+ VINY P ++YVHRIGRTG+ G G + F + +A
Sbjct: 581 VCTAVAARGLDIENVQHVINYDVPKEVDEYVHRIGRTGRCGNTGKATSFFNVQDDHVIAR 640
Query: 64 ELVNVLREARQVVPDAL--LKFGTH 86
LV +L +A Q VP L + FG H
Sbjct: 641 PLVKILTDAHQEVPAWLEEIAFGGH 665
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 169 (64.5 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 36/120 (30%), Positives = 68/120 (56%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLDIP V+VV+N+ P ++DY+HR+GRT +AG+ G + F+T ++ L
Sbjct: 318 LATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQR 377
Query: 65 LVNVLREARQVVP---DALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDDQG 121
+ +++ + P D ++ V + + + RE ++++ +N D +G
Sbjct: 378 IEHLIGKKLPGFPTQDDEVMMLTERVAEAQ-RFARMELREHGEKKKRSREDAGDNDDTEG 436
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 170 (64.9 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V V N+ P E YVHRIGRTG+AGKKG++ F+T +G+
Sbjct: 295 VATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRE---SGQ 351
Query: 65 LVNVLREARQ 74
L N+ R ++
Sbjct: 352 LKNIERTTKR 361
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 170 (64.9 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V V N+ P E YVHRIGRTG+AGKKG++ F+T +G+
Sbjct: 295 VATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRE---SGQ 351
Query: 65 LVNVLREARQ 74
L N+ R ++
Sbjct: 352 LKNIERTTKR 361
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 170 (64.9 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V V N+ P E YVHRIGRTG+AGKKG++ F+T +G+
Sbjct: 295 VATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRE---SGQ 351
Query: 65 LVNVLREARQ 74
L N+ R ++
Sbjct: 352 LKNIERTTKR 361
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 170 (64.9 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V V N+ P E YVHRIGRTG+AGKKG++ F+T +G+
Sbjct: 295 VATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRE---SGQ 351
Query: 65 LVNVLREARQ 74
L N+ R ++
Sbjct: 352 LKNIERTTKR 361
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 170 (64.9 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V V N+ P E YVHRIGRTG+AGKKG++ F+T +G+
Sbjct: 295 VATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRE---SGQ 351
Query: 65 LVNVLREARQ 74
L N+ R ++
Sbjct: 352 LKNIERTTKR 361
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 170 (64.9 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V V N+ P E YVHRIGRTG+AGKKG++ F+T +G+
Sbjct: 295 VATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRE---SGQ 351
Query: 65 LVNVLREARQ 74
L N+ R ++
Sbjct: 352 LKNIERTTKR 361
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 170 (64.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI V V N+ P E YVHRIGRTG+AGKKG++ F+T +G+
Sbjct: 295 VATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRE---SGQ 351
Query: 65 LVNVLREARQ 74
L N+ R ++
Sbjct: 352 LKNIERTTKR 361
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 169 (64.5 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V+VVINY P ++ Y+HR+GRT +AG+ G S +T ++ +
Sbjct: 417 VATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLR 476
Query: 65 LVNVL 69
+ +VL
Sbjct: 477 IESVL 481
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 167 (63.8 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 37/78 (47%), Positives = 49/78 (62%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARGLDI +E V+NY P EDYVHRIGRTG+AG G++ L+ H++ E
Sbjct: 306 IATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLS-HDEQPQLE 364
Query: 65 LVNVLREARQVVPDALLK 82
+ L R +P LK
Sbjct: 365 AIERLLNTR--LPQEWLK 380
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 167 (63.8 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 37/78 (47%), Positives = 49/78 (62%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARGLDI +E V+NY P EDYVHRIGRTG+AG G++ L+ H++ E
Sbjct: 306 IATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLS-HDEQPQLE 364
Query: 65 LVNVLREARQVVPDALLK 82
+ L R +P LK
Sbjct: 365 AIERLLNTR--LPQEWLK 380
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 168 (64.2 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 43/121 (35%), Positives = 72/121 (59%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLDIP V+VVIN++ P + Y+HR+GRT +AG++G + +T ++ L
Sbjct: 303 IATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLLHA 362
Query: 65 LVNVLRE--ARQVVPDA-LLKFGTHV----KKKESKLYGAHFREISADAPKAKKIPFNNS 117
+ +++ A VV +A +L+ T V ++ E KL +HF E + K K++
Sbjct: 363 IEEQIKQQLAELVVEEAEVLQILTQVNVVRRECEIKLEASHFDE-KKEINKRKQMILEGK 421
Query: 118 D 118
D
Sbjct: 422 D 422
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 168 (64.2 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++V+NY P+ ++ Y+HR+GRT +AG+ G S ++ ++ L
Sbjct: 376 VATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILR 435
Query: 65 LVNVL 69
+ VL
Sbjct: 436 IEEVL 440
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 172 (65.6 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+AT +A RGLDI V+ VINY P +DY+HRIGRTG+ G G + F++ L+ E
Sbjct: 872 IATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISEDCNLLS-E 930
Query: 65 LVNVLREARQVVPD 78
LV VL +A Q+VP+
Sbjct: 931 LVRVLSDADQLVPE 944
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 172 (65.6 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+AT +A RGLDI V+ VINY P +DY+HRIGRTG+ G G + F++ L+ E
Sbjct: 872 IATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISEDCNLLS-E 930
Query: 65 LVNVLREARQVVPD 78
LV VL +A Q+VP+
Sbjct: 931 LVRVLSDADQLVPE 944
>POMBASE|SPAC22F3.08c [details] [associations]
symbol:rok1 "ATP-dependent RNA helicase Rok1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC22F3.08c GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000242486 KO:K14779
PIR:T38183 RefSeq:NP_593033.1 ProteinModelPortal:Q09775
STRING:Q09775 EnsemblFungi:SPAC22F3.08c.1 GeneID:2541786
KEGG:spo:SPAC22F3.08c OMA:ERESINT OrthoDB:EOG425926
NextBio:20802875 Uniprot:Q09775
Length = 481
Score = 167 (63.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ +ATD+ ARG+D V++VIN+ FP + Y+HRIGRTG+AG G + F T +
Sbjct: 339 IWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKEDGE 398
Query: 61 LAGELVNVLREARQVVPD---ALLKFGTHVKKKESK 93
+ V+R + VP+ AL K +KKK K
Sbjct: 399 YIKLIAGVMRSSGCEVPNWVMALPKPSKEMKKKLKK 434
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 167 (63.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHN 58
V TD+AARGLDIP V++VINY P ++DYVHR+GRT +AG+ G++ +T ++
Sbjct: 338 VCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYD 391
>SGD|S000003139 [details] [associations]
symbol:ROK1 "RNA-dependent ATPase" species:4932
"Saccharomyces cerevisiae" [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0030686
"90S preribosome" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0048254 "snoRNA localization" evidence=IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003139
GO:GO:0005524 GO:GO:0005730 EMBL:BK006941 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X85757
GO:GO:0030686 GO:GO:0004004 GO:GO:0000447 GO:GO:0000472
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000480
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486 KO:K14779
OMA:NVMKQSG OrthoDB:EOG425926 EMBL:Z34901 EMBL:Z72693 PIR:S59649
RefSeq:NP_011344.1 ProteinModelPortal:P45818 SMR:P45818
DIP:DIP-5111N IntAct:P45818 MINT:MINT-483312 STRING:P45818
PaxDb:P45818 PeptideAtlas:P45818 EnsemblFungi:YGL171W GeneID:852704
KEGG:sce:YGL171W CYGD:YGL171w NextBio:972056 Genevestigator:P45818
GermOnline:YGL171W GO:GO:0048254 Uniprot:P45818
Length = 564
Score = 168 (64.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 40/114 (35%), Positives = 63/114 (55%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
++ + TD+ ARG+D V +VINY P +++ YVHRIGRTG+ G+ G + F T +
Sbjct: 423 LWCLICTDVLARGIDFKGVNLVINYDVPGSSQAYVHRIGRTGRGGRSGKAITFYTKQDSV 482
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKK-KESKLYG-AHF-REISADAPKAKK 111
++NV++++ V + + K +K KES G AH R+ PK K
Sbjct: 483 AIKPIINVMKQSGCEVSEWMDKMAKMTRKEKESIKNGKAHKERKQITTVPKMDK 536
>UNIPROTKB|P21507 [details] [associations]
symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
Genevestigator:P21507 Uniprot:P21507
Length = 444
Score = 166 (63.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARG+DIPDV V N+ P + + Y+HRIGRT +AG+KG + + H+ L G+
Sbjct: 303 VATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLLGK 362
Query: 65 LVNVLRE 71
+ + E
Sbjct: 363 VGRYIEE 369
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 170 (64.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+AT +A+RG+ + V VIN+ P EDY HRIGRTG+AG G++ F+T+ + + +
Sbjct: 736 IATGVASRGIHVDGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGLASSFITDKDVEIMYD 795
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKES 92
L +L +VP LLK + +K S
Sbjct: 796 LKQILTSTNNIVPIELLKHPSSQQKHGS 823
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 165 (63.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI +++ VIN+ P EDY+HRIGRTG+AG G++ + + L E
Sbjct: 300 VATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEE 359
Query: 65 LVNVL 69
+ +L
Sbjct: 360 VETLL 364
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 165 (63.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI +++ VIN+ P EDY+HRIGRTG+AG G++ + + L E
Sbjct: 300 VATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEE 359
Query: 65 LVNVL 69
+ +L
Sbjct: 360 VETLL 364
>UNIPROTKB|Q8EI96 [details] [associations]
symbol:srmB "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 165 (63.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 37/111 (33%), Positives = 63/111 (56%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARG+DI D+ VIN+ P + + Y+HRIGRTG+AG KG + H+ + G+
Sbjct: 300 LATDVAARGIDIDDISHVINFDMPRSADTYIHRIGRTGRAGAKGTAISLAEAHDMRIVGK 359
Query: 65 LVNVLREA--RQVVPDALLKFG-THVK-KKESKLYGAHFREISADAPKAKK 111
+ + + R+++ + K V KK++K+ + ++ AKK
Sbjct: 360 IERYIEQPLKRRIIEELRPKHKEARVPTKKKAKVKAKEAAKKTSKKEAAKK 410
>TIGR_CMR|SO_0947 [details] [associations]
symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 165 (63.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 37/111 (33%), Positives = 63/111 (56%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARG+DI D+ VIN+ P + + Y+HRIGRTG+AG KG + H+ + G+
Sbjct: 300 LATDVAARGIDIDDISHVINFDMPRSADTYIHRIGRTGRAGAKGTAISLAEAHDMRIVGK 359
Query: 65 LVNVLREA--RQVVPDALLKFG-THVK-KKESKLYGAHFREISADAPKAKK 111
+ + + R+++ + K V KK++K+ + ++ AKK
Sbjct: 360 IERYIEQPLKRRIIEELRPKHKEARVPTKKKAKVKAKEAAKKTSKKEAAKK 410
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 168 (64.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGV---SHPFLTNHNKAL 61
VAT +AARGLDI +V+ VIN+ P E+YVHRIGRTG+ G G+ + F N +
Sbjct: 497 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLIGLATSFFNERNINI 556
Query: 62 AGELVNVLREARQVVPDAL--LKFGTHVK---KKESKLY 95
+L+++L EA+Q VP L + + H K + SK Y
Sbjct: 557 TKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSY 595
>FB|FBgn0010220 [details] [associations]
symbol:Dbp45A "DEAD box protein 45A" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS;NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE013599
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
GeneTree:ENSGT00670000098028 EMBL:L13612 EMBL:Z23266 EMBL:AY058728
PIR:S38329 RefSeq:NP_476927.1 UniGene:Dm.4231
ProteinModelPortal:Q07886 SMR:Q07886 PaxDb:Q07886
EnsemblMetazoa:FBtr0088564 GeneID:35917 KEGG:dme:Dmel_CG12759
CTD:35917 FlyBase:FBgn0010220 InParanoid:Q07886 OMA:CQLLSMT
OrthoDB:EOG431ZDJ PhylomeDB:Q07886 GenomeRNAi:35917 NextBio:795815
Bgee:Q07886 GermOnline:CG12759 Uniprot:Q07886
Length = 521
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 28/46 (60%), Positives = 40/46 (86%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVS 50
+ATD+AARGLDIP VE+V+N+ P T ++Y+HR+GRT +AG+KG+S
Sbjct: 306 IATDVAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMS 351
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 165 (63.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGV 49
V TD+A+RGLDIP V+VVINY P ++DY+HR+GRT +AG+ GV
Sbjct: 315 VCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGV 359
>TAIR|locus:2075034 [details] [associations]
symbol:AT3G09720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AC016661
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000242486 KO:K14779 OMA:NVMKQSG EMBL:BT005833
EMBL:AK227326 IPI:IPI00542757 RefSeq:NP_187583.2 UniGene:At.40050
ProteinModelPortal:Q84TG1 SMR:Q84TG1 STRING:Q84TG1 PaxDb:Q84TG1
PRIDE:Q84TG1 EnsemblPlants:AT3G09720.1 GeneID:820129
KEGG:ath:AT3G09720 KEGG:dosa:Os07t0647900-01 GeneFarm:1036
TAIR:At3g09720 InParanoid:Q84TG1 PhylomeDB:Q84TG1
ProtClustDB:CLSN2690529 Genevestigator:Q84TG1 GermOnline:AT3G09720
Uniprot:Q84TG1
Length = 541
Score = 166 (63.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 39/118 (33%), Positives = 64/118 (54%)
Query: 2 YLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKAL 61
++ +ATD+ ARG+D + VINY FP + Y+HRIGR+G+AG+ G + F T +
Sbjct: 432 WVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPF 491
Query: 62 AGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDD 119
+ N + + VP ++ +KKK+ + + IS PKA K N++D+
Sbjct: 492 LRNIANTMMSSGCEVPSWIMS----LKKKKWRKHRPRRDSISTK-PKADK---NDTDE 541
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 166 (63.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++VINY P +++YVHR+GRT +AG G + +T ++ +
Sbjct: 413 VATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITIVTQYDVEMYQR 472
Query: 65 LVNVLREARQVVP 77
+ VL++ P
Sbjct: 473 IEFVLKKKLDSFP 485
>UNIPROTKB|Q8EJQ5 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 164 (62.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 34/49 (69%), Positives = 36/49 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPF 53
VATD+AARGL I DV V NY P EDYVHRIGRTG+AG KGVS F
Sbjct: 311 VATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSF 359
>TIGR_CMR|SO_0407 [details] [associations]
symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 164 (62.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 34/49 (69%), Positives = 36/49 (73%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPF 53
VATD+AARGL I DV V NY P EDYVHRIGRTG+AG KGVS F
Sbjct: 311 VATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSF 359
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 169 (64.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARGLDIP ++ V+NY E + HRIGRTG+AG GV++ +T + + +
Sbjct: 605 IATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLITPKDIHFSVD 664
Query: 65 LVNVLREARQVVPDALL 81
L+ L A Q VP L+
Sbjct: 665 LIKNLESASQFVPPELI 681
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 167 (63.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 37/74 (50%), Positives = 48/74 (64%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNH-NKALAG 63
VAT +AARGLDI +V+ VIN+ P T ++YVHRIGRTG+ G G + F + LA
Sbjct: 575 VATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGKAISFFDPEPDSHLAQ 634
Query: 64 ELVNVLREARQVVP 77
LV VL +A+Q P
Sbjct: 635 PLVKVLSDAQQGCP 648
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 166 (63.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKG 48
VATD+AARGLD+P+V++VI+Y P TE +VHR GRTG+AGKKG
Sbjct: 415 VATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKG 458
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 164 (62.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 33/70 (47%), Positives = 48/70 (68%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARGLDIP V+VVIN++ P + Y+HR+GRT +AG+ GVS +T ++
Sbjct: 303 IATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDI----H 358
Query: 65 LVNVLREARQ 74
L+N + E Q
Sbjct: 359 LINAIEEQNQ 368
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 164 (62.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 42/121 (34%), Positives = 71/121 (58%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLDIP V+VVIN++ P + Y+HR+GRT +AG++G + +T ++ L
Sbjct: 303 IATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLLHA 362
Query: 65 LVNVLRE--ARQVVPDA-LLKFGTHV----KKKESKLYGAHFREISADAPKAKKIPFNNS 117
+ +++ A V +A +L+ T V ++ E KL +HF E + K K++
Sbjct: 363 IEEEIKQQLAELAVEEAQVLQILTQVNVVRRECEIKLEASHFDE-KKEINKRKQMILEGK 421
Query: 118 D 118
D
Sbjct: 422 D 422
>WB|WBGene00011032 [details] [associations]
symbol:R05D11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486 KO:K14779
OMA:NVMKQSG EMBL:Z75546 PIR:T23922 RefSeq:NP_492326.1
ProteinModelPortal:Q21736 SMR:Q21736 STRING:Q21736 PaxDb:Q21736
EnsemblMetazoa:R05D11.4.1 EnsemblMetazoa:R05D11.4.2 GeneID:172651
KEGG:cel:CELE_R05D11.4 UCSC:R05D11.4 CTD:172651 WormBase:R05D11.4
InParanoid:Q21736 NextBio:876429 Uniprot:Q21736
Length = 581
Score = 165 (63.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 38/112 (33%), Positives = 64/112 (57%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+++ V T++ RGLD+ DV +VINY P + Y+HR+GRTG+AGK G + + T+ +
Sbjct: 426 IWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFTDADMK 485
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKI 112
+ V+R++ VP+ L++ KK S+ +++ APK KI
Sbjct: 486 YIKSIATVIRQSGFDVPEYLMEM-----KKVSR---DRKKDMLKHAPKRHKI 529
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 164 (62.8 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 29/57 (50%), Positives = 43/57 (75%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKAL 61
+ATD+A+RGLDIP V+ VIN+ P ++DY+HR+GRT +AG+ G S F+T ++ L
Sbjct: 373 LATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVEL 429
WARNING: HSPs involving 541 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 121 121 0.00091 102 3 11 22 0.38 31
29 0.49 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 791
No. of states in DFA: 511 (54 KB)
Total size of DFA: 106 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.83u 0.18s 12.01t Elapsed: 00:00:01
Total cpu time: 11.85u 0.18s 12.03t Elapsed: 00:00:01
Start: Fri May 10 19:02:28 2013 End: Fri May 10 19:02:29 2013
WARNINGS ISSUED: 2