BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038184
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C551|RH5_ARATH DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana
GN=RH5 PE=1 SV=1
Length = 537
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/118 (83%), Positives = 107/118 (90%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VATD+AARGLDIPDVEVVINY+FPLTTEDYVHRIGRTG+AGKKGV+H F T NK LA
Sbjct: 419 LLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLA 478
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDDQ 120
GELVNVLREA QVVP LLKFGTHVKKKESKLYGAHF+EI+ADAPKA KI F+NSDD+
Sbjct: 479 GELVNVLREAGQVVPADLLKFGTHVKKKESKLYGAHFKEIAADAPKATKITFDNSDDE 536
>sp|Q6YS30|RH5_ORYSJ DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp.
japonica GN=Os07g0301200 PE=2 SV=1
Length = 512
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 91/117 (77%), Positives = 104/117 (88%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+A+RGLDIPDVEVVINYS+PLTTEDYVHRIGRTG+AGKKGV+H F T NK LA
Sbjct: 395 LMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLA 454
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDD 119
GELVNVLREA QVVP AL KFGTHVKKKES++YG+HF+EI ADAPK+ KI F +SD+
Sbjct: 455 GELVNVLREAGQVVPPALTKFGTHVKKKESQIYGSHFKEIKADAPKSTKITFGDSDE 511
>sp|Q6BZ77|DBP3_DEBHA ATP-dependent RNA helicase DBP3 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP3 PE=3 SV=1
Length = 527
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+VVIN +FPLT EDYVHRIGRTG+AG+ G++H T H K L+
Sbjct: 416 LLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQTGIAHTLFTEHEKHLS 475
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
G L+NVLR A Q VPD LLKFG H KKK YGA F+++ AKKI F+
Sbjct: 476 GALMNVLRGANQPVPDELLKFGGHTKKKAHSAYGAFFKDVDM-TKTAKKIKFD 527
>sp|A5DAC8|DBP3_PICGU ATP-dependent RNA helicase DBP3 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP3 PE=3 SV=2
Length = 534
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+VVIN +FPLT EDYVHRIGRTG+AG+ G++H T H K L+
Sbjct: 423 LLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQTGIAHTLFTEHEKHLS 482
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPF 114
G L+NVLR A Q VPD LLKFG H KKK YGA F+++ AKKI F
Sbjct: 483 GALMNVLRGAGQPVPDELLKFGGHTKKKSHSAYGAFFKDVDM-TKTAKKIKF 533
>sp|A3LRW2|DBP3_PICST ATP-dependent RNA helicase DBP3 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DBP3 PE=3 SV=1
Length = 526
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+VVIN +FPLT EDYVHRIGRTG+AG+ G +H T H K L+
Sbjct: 415 LLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEHEKHLS 474
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
G L+N+LR A Q VPD LLKFG H KKK YGA F+++ AKKI F+
Sbjct: 475 GALMNILRGANQPVPDELLKFGGHTKKKAHSAYGAFFKDVDM-TKTAKKIKFD 526
>sp|Q0UY62|DBP3_PHANO ATP-dependent RNA helicase DBP3 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DBP3 PE=3 SV=1
Length = 592
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VATD+AARGLDIP V++VIN +FPLT EDYVHRIGRTG+AGK+G++ F T H+K L+
Sbjct: 481 LLVATDVAARGLDIPAVKLVINVTFPLTAEDYVHRIGRTGRAGKEGLAITFFTEHDKGLS 540
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
G L+NVL+ A Q VP+ LLKFGT VKKKE YGA ++++ + A KI F+
Sbjct: 541 GSLINVLKAANQEVPEELLKFGTTVKKKEHGAYGAFYKDVD-NTKAATKITFD 592
>sp|Q6C9P3|DBP3_YARLI ATP-dependent RNA helicase DBP3 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP3 PE=3 SV=1
Length = 532
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/111 (62%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARGLDIP+V++VIN +FPLT EDYVHRIGRTG+AGK G + T H K L+G
Sbjct: 423 LATDVAARGLDIPNVKLVINLTFPLTVEDYVHRIGRTGRAGKTGQAITLFTEHEKHLSGA 482
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
L+NVLR A Q VPD LLKFG H KKKE YGA F+++ KAKKI F+
Sbjct: 483 LINVLRGADQPVPDELLKFGGHTKKKEHGAYGAFFKDVDM-TKKAKKITFD 532
>sp|A7TJ36|DBP3_VANPO ATP-dependent RNA helicase DBP3 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DBP3 PE=3 SV=1
Length = 530
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+AARGLDIP+V+ VIN +FPLT EDYVHRIGRTG+AGK G +H T K LAG
Sbjct: 421 LATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGKTGTAHTLFTEQEKHLAGS 480
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
LVNVL A Q VP+ L KFGTH KKKE YGA ++++ KAKKI F+
Sbjct: 481 LVNVLNGAGQPVPEELKKFGTHTKKKEHSAYGAFYKDVDM-TKKAKKITFD 530
>sp|Q755A5|DBP3_ASHGO ATP-dependent RNA helicase DBP3 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP3
PE=3 SV=1
Length = 535
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+ VIN +FPLT EDYVHRIGRTG+AG GV+H T K LA
Sbjct: 424 LLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGATGVAHTLFTEQEKHLA 483
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
G LVNVL A Q VP+ L+KFGTH K+KE YGA ++ + KAKKI F+
Sbjct: 484 GALVNVLNGAGQPVPEELMKFGTHTKRKEHNAYGAFYKNVDL-TKKAKKITFD 535
>sp|Q6FS54|DBP3_CANGA ATP-dependent RNA helicase DBP3 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP3 PE=3 SV=1
Length = 540
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+ VIN +FPLT EDYVHRIGRTG+AG+ G +H T K LA
Sbjct: 429 LLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLA 488
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
G LVNVL A Q VP+ L+KFGTH K+KE YGA F++I + K KKI F+
Sbjct: 489 GGLVNVLNGANQPVPEDLIKFGTHTKRKEHGAYGAFFKDIDM-SKKPKKITFD 540
>sp|Q5APT8|DBP3_CANAL ATP-dependent RNA helicase DBP3 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP3 PE=3 SV=1
Length = 564
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+VVIN +FPLT EDYVHRIGRTG+AG KG +H T K L+
Sbjct: 453 LLLATDVAARGLDIPNVKVVINLTFPLTIEDYVHRIGRTGRAGAKGTAHTLFTEDEKHLS 512
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
G L N+LR A Q VP+ LLKFG H KKK +YGA ++++ AKKI F+
Sbjct: 513 GALCNILRGANQPVPEELLKFGGHTKKKAHSVYGAFYKDVDM-TKTAKKIKFD 564
>sp|A6SCT6|DBP3_BOTFB ATP-dependent RNA helicase dbp3 OS=Botryotinia fuckeliana (strain
B05.10) GN=dbp3 PE=3 SV=1
Length = 592
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++VIN +FPLT EDYVHRIGRTG+AGK G++ T H+KA +G
Sbjct: 483 VATDVAARGLDIPAVKLVINCTFPLTVEDYVHRIGRTGRAGKDGLAITLFTEHDKAQSGA 542
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
L+NVL+ A Q VPD LLKFGT VKKK YGA F+ + KA KI F+
Sbjct: 543 LINVLKAANQPVPDELLKFGTTVKKKAHDAYGAFFKNVDT-TKKATKITFD 592
>sp|P20447|DBP3_YEAST ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP3 PE=1 SV=2
Length = 523
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+ VIN +FPLT EDYVHRIGRTG+AG+ G +H T K LA
Sbjct: 412 LLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLA 471
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
G LVNVL A Q VP+ L+KFGTH KKKE YG+ F+++ K KKI F+
Sbjct: 472 GGLVNVLNGANQPVPEDLIKFGTHTKKKEHSAYGSFFKDVDL-TKKPKKITFD 523
>sp|A7EYW0|DBP3_SCLS1 ATP-dependent RNA helicase dbp3 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=dbp3 PE=3 SV=2
Length = 596
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++VIN +FPLT EDYVHRIGRTG+AGK G++ T H+KA +G
Sbjct: 487 VATDVAARGLDIPAVKLVINCTFPLTVEDYVHRIGRTGRAGKDGLAITLFTEHDKAQSGA 546
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
L+NVL+ A Q VPD LLKFGT VKKK YGA F+ + KA KI F+
Sbjct: 547 LINVLKAANQPVPDELLKFGTTVKKKAHDAYGAFFKNVDT-TKKATKITFD 596
>sp|A6ZUA1|DBP3_YEAS7 ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP3 PE=3 SV=1
Length = 523
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+ VIN +FPLT EDYVHRIGRTG+AG+ G +H T K LA
Sbjct: 412 LLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLA 471
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
G LVNVL A Q VP+ L+KFGTH KKKE YG+ F+++ K KKI F+
Sbjct: 472 GGLVNVLNGANQPVPEDLIKFGTHTKKKEHSAYGSFFKDVDL-TKKPKKITFD 523
>sp|Q4IJH1|DBP3_GIBZE ATP-dependent RNA helicase DBP3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP3 PE=3
SV=1
Length = 581
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP+V++VIN +FPLT EDYVHRIGRTG+AGK G + F T +K+ +G
Sbjct: 472 VATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKTGQAITFFTVEDKSHSGS 531
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
LVN+LR A Q VP+ LLKFGT VKKK +YGA F+++ +A K+ KI F+
Sbjct: 532 LVNILRGANQPVPEDLLKFGTTVKKKAHDMYGAFFKDVDMNA-KSTKITFD 581
>sp|Q6CT46|DBP3_KLULA ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP3 PE=3 SV=1
Length = 504
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+ VIN +FPLT EDYVHRIGRTG+AG+ G +H T K LA
Sbjct: 393 LLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQYGTAHTLFTEQEKHLA 452
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
G LVNVL A Q VP+ L KFGTH KKKE YGA F+++ + K KKI F+
Sbjct: 453 GALVNVLNGAGQPVPEELKKFGTHTKKKEHSAYGAFFKDVDL-SKKPKKITFD 504
>sp|Q7S5R1|DBP3_NEUCR ATP-dependent RNA helicase dbp-3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-3 PE=3 SV=1
Length = 614
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP+V++VIN +FPLT EDYVHRIGRTG+AGK G + T H+KA +G
Sbjct: 505 VATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKLGKAITLFTEHDKAHSGS 564
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
LVN+LR A+Q VP+ LLKFGT VKKK YG+ +++I + KA KI F+
Sbjct: 565 LVNILRAAKQPVPEELLKFGTTVKKKAHDAYGSFYKDIDPNK-KATKITFD 614
>sp|A6QXC1|DBP3_AJECN ATP-dependent RNA helicase DBP3 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP3 PE=3 SV=1
Length = 487
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 87/113 (76%), Gaps = 3/113 (2%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++V+N +FPLT EDYVHRIGRTG+AG G++ T ++KAL+G
Sbjct: 377 VATDVAARGLDIPAVKLVLNVTFPLTVEDYVHRIGRTGRAGSDGLAITMFTENDKALSGG 436
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPK-AKKIPFNN 116
LVN+L+ A Q +P+ALLKFGT VKKK+ YGA FRE AD K A KI F++
Sbjct: 437 LVNILKGANQDIPEALLKFGTTVKKKQHDSYGAFFRE--ADTMKTATKIKFDD 487
>sp|Q1DZK8|DBP3_COCIM ATP-dependent RNA helicase DBP3 OS=Coccidioides immitis (strain RS)
GN=DBP3 PE=3 SV=2
Length = 515
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 88/117 (75%), Gaps = 3/117 (2%)
Query: 1 MYLQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKA 60
+ L VATD+AARGLDIP V++V+N +FPLT EDYVHRIGRTG+AG +G++ T +KA
Sbjct: 401 ISLLVATDVAARGLDIPAVKLVLNVTFPLTIEDYVHRIGRTGRAGAEGLAITLFTERDKA 460
Query: 61 LAGELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPK-AKKIPFNN 116
L+G L+NVLR A Q VP++LLKFG VKKK+ + YGA FRE+ D K A +I F +
Sbjct: 461 LSGPLINVLRAADQDVPESLLKFGATVKKKQHESYGAFFREM--DTTKVASRIKFED 515
>sp|Q4WH83|DBP3_ASPFU ATP-dependent RNA helicase dbp3 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dbp3
PE=3 SV=1
Length = 503
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++VIN +FPLT EDYVHRIGRTG+AG G + T +KA +G
Sbjct: 393 VATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGADGHAITLFTEADKAQSGA 452
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNN 116
L+NVLR A+Q VPDALLKFGT VKKK+ YGA F+++ + A KI F+
Sbjct: 453 LINVLRAAKQDVPDALLKFGTTVKKKQHGAYGAFFKDVDT-SKSATKIVFDE 503
>sp|A1DG51|DBP3_NEOFI ATP-dependent RNA helicase dbp3 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp3
PE=3 SV=1
Length = 503
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++VIN +FPLT EDYVHRIGRTG+AG G + T +KA +G
Sbjct: 393 VATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETDKAQSGA 452
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNN 116
L+NVLR A+Q VPDALLKFGT VKKK+ YGA F+++ + A KI F+
Sbjct: 453 LINVLRAAKQDVPDALLKFGTTVKKKQHGAYGAFFKDVDT-SKSATKIVFDE 503
>sp|A5E1W4|DBP3_LODEL ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP3 PE=3 SV=2
Length = 535
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 78/100 (78%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L +ATD+AARGLDIP+V+ VIN +FPLT EDYVHR+GRTG+AG+ G++H F T K L+
Sbjct: 427 LLLATDVAARGLDIPNVKYVINLTFPLTIEDYVHRLGRTGRAGQTGIAHTFFTEDEKHLS 486
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREI 102
G L N+LR A Q VP+ALLK+G H KKK +YGA ++++
Sbjct: 487 GALCNILRGANQPVPEALLKYGGHTKKKTHSVYGAFYKDV 526
>sp|A1C5V3|DBP3_ASPCL ATP-dependent RNA helicase dbp3 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp3 PE=3 SV=1
Length = 503
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 85/113 (75%), Gaps = 3/113 (2%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++VIN +FPLT EDYVHRIGRTG+AG +G + T +KA +G
Sbjct: 393 VATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGAEGRAITLFTETDKAQSGA 452
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPK-AKKIPFNN 116
L+NVL+ A+Q VP LLKFGT VKKK+ YGA F+E AD+ K A KI F++
Sbjct: 453 LINVLKAAKQEVPQELLKFGTTVKKKQHGAYGAFFKE--ADSGKSATKIVFDD 503
>sp|Q2UMH8|DBP3_ASPOR ATP-dependent RNA helicase dbp3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp3 PE=3 SV=1
Length = 498
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V+ VIN +FPLT EDYVHRIGRTG+AG +G + T +KA +G
Sbjct: 388 VATDVAARGLDIPSVKQVINVTFPLTVEDYVHRIGRTGRAGAEGHAVTLFTETDKAQSGA 447
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNN 116
L+NVLR A+Q +P+ LLKFGT VKKK+ YGA F+ + D A KI F++
Sbjct: 448 LINVLRAAKQDIPEDLLKFGTTVKKKQHDAYGAFFKNVDTDK-TATKIVFDD 498
>sp|Q5AWA6|DBP3_EMENI ATP-dependent RNA helicase dbp3 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp3
PE=3 SV=2
Length = 488
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++V+N +FPLT EDYVHRIGRTG+AG G + T +KA +G
Sbjct: 378 VATDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETDKAQSGA 437
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNN 116
L+NVL+ A Q VP+ALLKFG+ VKKK+ YGA F+++ A KI F++
Sbjct: 438 LINVLKAANQEVPEALLKFGSTVKKKQHDAYGAFFKDVEP-GKAATKIVFDD 488
>sp|P0CQ79|DBP3_CRYNB ATP-dependent RNA helicase DBP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DBP3 PE=3 SV=1
Length = 605
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 81/113 (71%), Gaps = 3/113 (2%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT--NHNKALA 62
VATD+AARGLDIPDV +VIN +FPLTTED+VHR GRTG+AGK G + F T NH K+LA
Sbjct: 494 VATDVAARGLDIPDVGLVINVTFPLTTEDFVHRCGRTGRAGKTGKAVTFFTGENHEKSLA 553
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
GE + VLR+ +P + +F T +KKKE YGA ++E S +AP KI F+
Sbjct: 554 GEFMRVLRDVGAEIPKEMDRFPTTIKKKEHGSYGAFYKETS-NAPAPTKITFD 605
>sp|P0CQ78|DBP3_CRYNJ ATP-dependent RNA helicase DBP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP3 PE=3 SV=1
Length = 605
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 81/113 (71%), Gaps = 3/113 (2%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLT--NHNKALA 62
VATD+AARGLDIPDV +VIN +FPLTTED+VHR GRTG+AGK G + F T NH K+LA
Sbjct: 494 VATDVAARGLDIPDVGLVINVTFPLTTEDFVHRCGRTGRAGKTGKAVTFFTGENHEKSLA 553
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
GE + VLR+ +P + +F T +KKKE YGA ++E + +AP KI F+
Sbjct: 554 GEFMRVLRDVGAEIPKEMDRFPTTIKKKEHGSYGAFYKE-TTNAPAPTKITFD 605
>sp|Q0CL13|DBP3_ASPTN ATP-dependent RNA helicase dbp3 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp3 PE=3 SV=1
Length = 493
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++VIN +FPLT EDYVHRIGRTG+AG +G + T +KA +G
Sbjct: 383 VATDVAARGLDIPAVKLVINVTFPLTVEDYVHRIGRTGRAGAEGHAITLFTETDKAQSGA 442
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNN 116
L+NVL+ A Q VP+ LLKFG VKKK+ YGA F+++ A KI F++
Sbjct: 443 LINVLKAAGQEVPEELLKFGGTVKKKQHDAYGAFFKDVDT-TKAATKIVFDD 493
>sp|Q10202|DBP3_SCHPO ATP-dependent RNA helicase dbp3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp3 PE=3 SV=1
Length = 578
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 3/111 (2%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++VIN +FPLT EDYVHRIGRTG+A KG + F T +K+ AGE
Sbjct: 471 VATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQDKSHAGE 530
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFN 115
LVNVLR+A+Q +P+ L KFGT VK K + YG+ ++ A A KI F+
Sbjct: 531 LVNVLRQAKQDIPEGLFKFGTAVKPKLNA-YGSRVVDVPVKA--ATKIVFD 578
>sp|A2QFL3|DBP3_ASPNC ATP-dependent RNA helicase dbp3 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp3 PE=3 SV=1
Length = 495
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDIP V++VIN +FPLT EDYVHRIGRTG+AG +G + T +KA +G
Sbjct: 385 VATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGAEGHAITLFTEVDKAQSGA 444
Query: 65 LVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNN 116
L+NVL+ A Q VP+ LLKFG VKKK+ YGA ++++ + + KI F++
Sbjct: 445 LINVLKAANQDVPEDLLKFGATVKKKQHDAYGAFYKDVDTNK-TSTKIVFDD 495
>sp|Q4PDT1|DBP3_USTMA ATP-dependent RNA helicase DBP3 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP3 PE=3 SV=1
Length = 585
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
L VATD+AARGLDIP+VE V+NY+FPLT EDYVHRIGRTG+ GK G S F T +KA A
Sbjct: 473 LLVATDVAARGLDIPNVEHVVNYTFPLTIEDYVHRIGRTGRGGKTGKSLTFFTEMDKAHA 532
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFREISADAPKAKKIPFNN 116
GEL+ VL++A Q VPDAL KF T +KKK YG HF+E+ KAKKI F++
Sbjct: 533 GELIRVLKDADQKVPDALTKFPTTIKKKTHSSYGDHFKELVPG--KAKKITFDD 584
>sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana
GN=RH30 PE=2 SV=2
Length = 591
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 58/78 (74%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ ATD+AARGLD+ D++ V+NY FP T EDY+HRIGRTG+AG KG++ F T+ N A
Sbjct: 463 IMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFA 522
Query: 63 GELVNVLREARQVVPDAL 80
ELV +L+EA QVVP L
Sbjct: 523 RELVKILQEAGQVVPPTL 540
>sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP2 PE=3 SV=1
Length = 544
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 58/81 (71%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+AARG+D+ + V+NY P EDYVHRIGRTG+AG G + F T NK+L
Sbjct: 410 IMVATDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLG 469
Query: 63 GELVNVLREARQVVPDALLKF 83
L++++REA+Q +P+ L+K+
Sbjct: 470 ASLISIMREAKQNIPEELMKY 490
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ ATD+AARGLD+ DV+ VINY FP + EDYVHRIGRTG+AG KG ++ F T N A
Sbjct: 397 IMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFA 456
Query: 63 GELVNVLREARQVVPDALLKFG 84
EL N+L+EA Q V L G
Sbjct: 457 KELTNILQEAGQKVSPELASMG 478
>sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP2 PE=3 SV=1
Length = 536
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+AARG+D+ + VIN P EDYVHRIGRTG+AG G + F T++N L
Sbjct: 405 IMVATDVAARGIDVKGISYVINLDMPGNIEDYVHRIGRTGRAGSTGTAVSFFTDNNSKLG 464
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFR 100
G+L ++REA Q +P L++F + + +G+H R
Sbjct: 465 GDLCKIMREANQTIPPELMRF-------DRRSFGSHIR 495
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ ATD+AARGLD+ DV+ VINY FP + EDYVHRIGRTG+AG KG ++ F T N A
Sbjct: 389 IMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFA 448
Query: 63 GELVNVLREARQVVPDALLKFG 84
+L+N+L EA Q V L G
Sbjct: 449 KDLINILEEAGQKVSPELANMG 470
>sp|A5DL80|DBP2_PICGU ATP-dependent RNA helicase DBP2 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP2 PE=3 SV=3
Length = 554
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+AARG+D+ + VINY P EDYVHRIGRTG+AG G + T N L
Sbjct: 425 IMVATDVAARGIDVKGISYVINYDMPGNIEDYVHRIGRTGRAGTTGTAVSLFTEANSKLG 484
Query: 63 GELVNVLREARQVVPDALLK-----FGTHVK 88
G+L ++REA Q VP LL+ FG+H++
Sbjct: 485 GDLCKIMREANQTVPPELLRYDRRSFGSHIR 515
>sp|A6ZRX0|DBP2_YEAS7 ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP2 PE=3 SV=1
Length = 546
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 56/81 (69%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+AARG+D+ + VINY P EDYVHRIGRTG+AG G + F T NK L
Sbjct: 413 IMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLG 472
Query: 63 GELVNVLREARQVVPDALLKF 83
+L++++REA Q +P LLK+
Sbjct: 473 AKLISIMREANQNIPPELLKY 493
>sp|P24783|DBP2_YEAST ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP2 PE=1 SV=1
Length = 546
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 56/81 (69%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+AARG+D+ + VINY P EDYVHRIGRTG+AG G + F T NK L
Sbjct: 413 IMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLG 472
Query: 63 GELVNVLREARQVVPDALLKF 83
+L++++REA Q +P LLK+
Sbjct: 473 AKLISIMREANQNIPPELLKY 493
>sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp.
japonica GN=Os01g0911100 PE=2 SV=2
Length = 666
Score = 93.6 bits (231), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ ATD+AARGLD+ D++ VIN+ FP T EDY+HRIGRTG+AG G + F T N +
Sbjct: 549 IMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFS 608
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFR 100
LV +LREA QVV AL + K S + G +FR
Sbjct: 609 RNLVKILREAGQVVNPAL----ESMAKSASSMGGGNFR 642
>sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp.
japonica GN=Os06g0602400 PE=2 SV=2
Length = 602
Score = 93.6 bits (231), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/82 (52%), Positives = 60/82 (73%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+A+RGLD+P+V VINY P + EDYVHRIGRTG+AGK G + F T + +LA
Sbjct: 404 IMVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLA 463
Query: 63 GELVNVLREARQVVPDALLKFG 84
L+ ++ EA+Q VPD L+++
Sbjct: 464 KGLLELMTEAKQDVPDWLVQYA 485
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+AARG+D+ + VINY P EDYVHRIGRTG+AG G + F T NK L
Sbjct: 414 IMVATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKTLG 473
Query: 63 GELVNVLREARQVVPDALLKF 83
+L++++REA+Q +P LL +
Sbjct: 474 AQLISIMREAKQEIPQDLLVY 494
>sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP2 PE=3 SV=2
Length = 562
Score = 93.2 bits (230), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VATD+AARG+D+ + VINY P EDYVHRIGRTG+ G G + F T N L
Sbjct: 427 IMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLG 486
Query: 63 GELVNVLREARQVVPDALLKFGTHVKKKESKLYGAHFR 100
G+L ++REA Q VP L +F + + YG+H R
Sbjct: 487 GDLCKIMREANQTVPPELQRF-------DRRSYGSHMR 517
>sp|Q4PHU9|DBP2_USTMA ATP-dependent RNA helicase DBP2 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP2 PE=3 SV=2
Length = 552
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 55/75 (73%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ VAT +A+RGLD+ D+ VINY FP TEDYVH+IGRTG+AG+ G ++ + T N A
Sbjct: 429 IMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTPENSKSA 488
Query: 63 GELVNVLREARQVVP 77
EL+ +LREA+Q +P
Sbjct: 489 RELIGILREAKQEIP 503
>sp|P0CQ76|DBP2_CRYNJ ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP2 PE=3 SV=1
Length = 540
Score = 92.4 bits (228), Expect = 7e-19, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ +ATD+A+RGLD+ D+ VINY FP EDY+HRIGRTG+AG+KG S+ + T N A
Sbjct: 409 IMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAA 468
Query: 63 GELVNVLREARQVVPDAL 80
ELV +LRE++ +P L
Sbjct: 469 RELVQILRESKADIPPEL 486
>sp|P0CQ77|DBP2_CRYNB ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DBP2 PE=3 SV=1
Length = 540
Score = 92.4 bits (228), Expect = 7e-19, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ +ATD+A+RGLD+ D+ VINY FP EDY+HRIGRTG+AG+KG S+ + T N A
Sbjct: 409 IMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAA 468
Query: 63 GELVNVLREARQVVPDAL 80
ELV +LRE++ +P L
Sbjct: 469 RELVQILRESKADIPPEL 486
>sp|Q9NXZ2|DDX43_HUMAN Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens GN=DDX43
PE=2 SV=2
Length = 648
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 4/91 (4%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
+ATD+A+RGLD+ DV V N+ FP E+YVHRIGRTG+AG+ GVS LT ++ +A E
Sbjct: 542 IATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASE 601
Query: 65 LVNVLREARQVVPDALL----KFGTHVKKKE 91
L+N+L A Q +P+ L+ +F H +K+E
Sbjct: 602 LINILERANQSIPEELVSMAERFKAHQQKRE 632
>sp|P46942|DB10_NICSY ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana
sylvestris PE=2 SV=1
Length = 607
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 54/76 (71%)
Query: 5 VATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALAGE 64
VATD+AARGLDI D+ VVINY FP EDYVHRIGRTG+AG G+++ F ++ + A +
Sbjct: 444 VATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGASGLAYTFFSDQDSKHALD 503
Query: 65 LVNVLREARQVVPDAL 80
LV VL A Q VP L
Sbjct: 504 LVKVLEGANQCVPTEL 519
>sp|Q54CE0|DDX17_DICDI Probable ATP-dependent RNA helicase ddx17 OS=Dictyostelium
discoideum GN=ddx17 PE=3 SV=1
Length = 785
Score = 92.0 bits (227), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 3 LQVATDIAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGQAGKKGVSHPFLTNHNKALA 62
+ +ATD+A+RGLDI D++ V+NY FP T E Y+HRIGRT +AG GVS+ LT N LA
Sbjct: 682 IMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLA 741
Query: 63 GELVNVLREARQVVP 77
EL+ VL EA+Q +P
Sbjct: 742 NELIKVLTEAKQKIP 756
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,393,743
Number of Sequences: 539616
Number of extensions: 1669254
Number of successful extensions: 5679
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4273
Number of HSP's gapped (non-prelim): 1353
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)