BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038186
MCIHWCFRETLGNVLLSIYANKESVDETLVEVLIFSTYIACNEEGVLDAFVSIVTGPPGP
NPVQLMPTIFIPVLVLWGDKDPFTPLDGPVGKYFSSLPSKLSNVKLIVLEGVRHCPHDDR
PELVHENMLPWLAETFNF

High Scoring Gene Products

Symbol, full name Information P value
AT5G38520 protein from Arabidopsis thaliana 8.4e-42
AT5G19850 protein from Arabidopsis thaliana 4.6e-13
AT4G36530 protein from Arabidopsis thaliana 2.0e-07
AT1G80280 protein from Arabidopsis thaliana 7.3e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038186
        (138 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2159823 - symbol:AT5G38520 species:3702 "Arabi...   443  8.4e-42   1
TAIR|locus:2832896 - symbol:AT5G19850 species:3702 "Arabi...   177  4.6e-13   1
TAIR|locus:2115440 - symbol:AT4G36530 species:3702 "Arabi...   126  2.0e-07   1
TAIR|locus:2034220 - symbol:AT1G80280 species:3702 "Arabi...   100  7.3e-05   2


>TAIR|locus:2159823 [details] [associations]
            symbol:AT5G38520 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016787 "hydrolase
            activity" evidence=ISS] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=RCA] [GO:0009657 "plastid
            organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
            evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
            biosynthetic process" evidence=RCA] [GO:0019761 "glucosinolate
            biosynthetic process" evidence=RCA] [GO:0043085 "positive
            regulation of catalytic activity" evidence=RCA] EMBL:CP002688
            GO:GO:0009941 GO:GO:0016787 GO:GO:0009534 IPI:IPI00846134
            RefSeq:NP_001078682.1 UniGene:At.20746 ProteinModelPortal:F4KBJ3
            SMR:F4KBJ3 PRIDE:F4KBJ3 EnsemblPlants:AT5G38520.2 GeneID:833840
            KEGG:ath:AT5G38520 OMA:TPILLIW Uniprot:F4KBJ3
        Length = 374

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 81/127 (63%), Positives = 100/127 (78%)

Query:     8 RETLGNVLLSIYANKESVDETLVEVLIFSTYIACNEEGVLDAFVSIVTGPPGPNPVQLMP 67
             RE L N+L ++Y NK++VD+TLVE++        N EG LDAFVSI+TGPPGPNP++L+P
Sbjct:   248 RENLKNILTNVYGNKDNVDDTLVEIIAGPA----NTEGALDAFVSILTGPPGPNPIKLIP 303

Query:    68 TIFIPVLVLWGDKDPFTPLDGPVGKYFSSLPSKLSNVKLIVLEGVRHCPHDDRPELVHEN 127
              I  PVLVLWGD+D  TPLDGPVGKYF+SLP +L N  L VL+GV HCP DDRP+LVHE 
Sbjct:   304 EITKPVLVLWGDQDGLTPLDGPVGKYFTSLPDQLPNFNLYVLQGVGHCPQDDRPDLVHER 363

Query:   128 MLPWLAE 134
             +LPWLA+
Sbjct:   364 LLPWLAQ 370


>TAIR|locus:2832896 [details] [associations]
            symbol:AT5G19850 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0016787 "hydrolase
            activity" evidence=ISS] InterPro:IPR000073 EMBL:CP002688
            GO:GO:0016787 PRINTS:PR00111 IPI:IPI00529562 RefSeq:NP_568381.1
            UniGene:At.31247 UniGene:At.66697 ProteinModelPortal:F4K2M9
            SMR:F4K2M9 PRIDE:F4K2M9 EnsemblPlants:AT5G19850.1 GeneID:832105
            KEGG:ath:AT5G19850 OMA:YTFETWG Uniprot:F4K2M9
        Length = 359

 Score = 177 (67.4 bits), Expect = 4.6e-13, P = 4.6e-13
 Identities = 37/117 (31%), Positives = 64/117 (54%)

Query:     9 ETLGNVLLSIYANKESVDETLVEVLIFSTYIACNEEGVLDAFVSIVTGPPGPNPVQLMPT 68
             ET+ ++L   Y +   V + LVE ++        E G +D F+  +    GP P  L+P 
Sbjct:   242 ETVKSILCQCYHDSSQVTDELVEAILRPGL----EPGAVDVFLEFICYSGGPLPEDLLPL 297

Query:    69 IFIPVLVLWGDKDPFTPLDGPVGKYFSSLPSKLSNVKLIVLEGVRHCPHDDRPELVH 125
             +  PVL+ WG+KDP+ P++  +G+ +S+  +       +VL    HCP D++PE+V+
Sbjct:   298 VKCPVLIAWGEKDPWEPIE--LGRAYSNFDAVED---FVVLPDAGHCPQDEKPEMVN 349


>TAIR|locus:2115440 [details] [associations]
            symbol:AT4G36530 species:3702 "Arabidopsis thaliana"
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0016787 "hydrolase activity" evidence=ISS]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0000023
            "maltose metabolic process" evidence=RCA] [GO:0019252 "starch
            biosynthetic process" evidence=RCA] [GO:0043085 "positive
            regulation of catalytic activity" evidence=RCA] InterPro:IPR000639
            PRINTS:PR00412 InterPro:IPR000073 EMBL:CP002687 GO:GO:0009941
            GO:GO:0016787 PRINTS:PR00111 EMBL:AL161589 EMBL:Z99708 HSSP:O31243
            EMBL:AY087588 EMBL:AK227038 IPI:IPI00542770 PIR:C85431
            RefSeq:NP_195371.1 UniGene:At.4614 ProteinModelPortal:O23227
            SMR:O23227 STRING:O23227 MEROPS:S33.A01 PRIDE:O23227
            EnsemblPlants:AT4G36530.2 GeneID:829805 KEGG:ath:AT4G36530
            TAIR:At4g36530 InParanoid:O23227 OMA:FENLRRP PhylomeDB:O23227
            ProtClustDB:PLN02578 ArrayExpress:O23227 Genevestigator:O23227
            InterPro:IPR026129 PANTHER:PTHR10992:SF20 Uniprot:O23227
        Length = 378

 Score = 126 (49.4 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 35/121 (28%), Positives = 58/121 (47%)

Query:    13 NVLLSIYANKESVDETLVEVLIFSTYIACNEEGVLDAFVSIVTGPPGPNPVQLMPTIFIP 72
             +VL S+Y +  +VD+ LVE +          E         +T         ++  +  P
Sbjct:   249 SVLKSVYIDSTNVDDYLVESISKPATDPNAGEVYYRLMTRFLTNQSRYTLDSVLSKMTCP 308

Query:    73 VLVLWGDKDPFTPLDGPVGKYFSSLPSKLSNVKLIVLEGVRHCPHDDRPELVHENMLPWL 132
             +L++WGD DP+    GP       + +  SN  L+ L+   HCPHD+ PE V++ +L WL
Sbjct:   309 LLLVWGDLDPWV---GPAKA--EKIKAFYSNSSLVHLQA-GHCPHDEVPEAVNKALLDWL 362

Query:   133 A 133
             +
Sbjct:   363 S 363


>TAIR|locus:2034220 [details] [associations]
            symbol:AT1G80280 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0016787 "hydrolase
            activity" evidence=ISS] EMBL:CP002684 GO:GO:0016787 EMBL:AC018848
            UniGene:At.72982 EMBL:AY099691 EMBL:BT000273 IPI:IPI00545190
            PIR:C96834 RefSeq:NP_178144.1 UniGene:At.18173
            ProteinModelPortal:Q9C976 SMR:Q9C976 EnsemblPlants:AT1G80280.1
            GeneID:844368 KEGG:ath:AT1G80280 TAIR:At1g80280
            HOGENOM:HOG000005844 InParanoid:Q9C976 OMA:CREDGIN PhylomeDB:Q9C976
            ProtClustDB:CLSN2679484 ArrayExpress:Q9C976 Genevestigator:Q9C976
            Uniprot:Q9C976
        Length = 647

 Score = 100 (40.3 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query:    58 PGPNPVQLMPTIF-IPVLVLWGDKDPFTPLDGPVGKYFSSLPSKLSNVKLIVLEGVRHCP 116
             P  N + L+  +  +PVLV+ G +D   PL     K    + SKL N +L+ + G  H P
Sbjct:   569 PTQNALSLLKAVENLPVLVVAGAEDALVPL-----KSSQVMASKLENSRLVAISGCGHLP 623

Query:   117 HDDRPELVHENMLPWLA 133
             H++ P+ +   M P+++
Sbjct:   624 HEECPKALLAAMCPFIS 640

 Score = 33 (16.7 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query:    16 LSIYANKESVDETLVEVLIFSTYIAC 41
             LS YA K S+ +  +  L+ S  + C
Sbjct:    64 LSRYAFKSSLTDIPLVSLVRSFLVIC 89


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.142   0.460    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      138       138   0.00091  102 3  11 22  0.42    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  576 (61 KB)
  Total size of DFA:  148 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.58u 0.14s 14.72t   Elapsed:  00:00:01
  Total cpu time:  14.59u 0.14s 14.73t   Elapsed:  00:00:01
  Start:  Fri May 10 19:11:00 2013   End:  Fri May 10 19:11:01 2013

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