Query 038188
Match_columns 384
No_of_seqs 142 out of 1694
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 14:21:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038188.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038188hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 99.3 2.1E-09 7.3E-14 97.6 26.2 198 119-342 90-297 (308)
2 3ii7_A Kelch-like protein 7; p 99.3 1.3E-09 4.3E-14 98.9 22.5 211 106-341 51-281 (306)
3 4asc_A Kelch repeat and BTB do 99.2 3.4E-09 1.2E-13 96.5 25.2 197 120-339 68-284 (315)
4 2vpj_A Kelch-like protein 12; 99.2 3E-09 1E-13 96.1 23.6 208 107-340 59-286 (301)
5 2xn4_A Kelch-like protein 2; s 99.2 7.1E-09 2.4E-13 93.7 24.3 207 107-339 58-283 (302)
6 2woz_A Kelch repeat and BTB do 99.2 1.1E-08 3.9E-13 93.2 25.8 194 121-338 80-293 (318)
7 2vpj_A Kelch-like protein 12; 99.2 1.5E-08 5.2E-13 91.5 24.8 220 119-366 31-263 (301)
8 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 2.9E-11 9.8E-16 79.1 4.2 45 7-51 5-49 (53)
9 1zgk_A Kelch-like ECH-associat 99.1 1.1E-08 3.9E-13 92.7 21.9 224 119-366 39-272 (308)
10 2xn4_A Kelch-like protein 2; s 99.1 2.6E-08 8.9E-13 90.0 24.1 220 119-366 30-261 (302)
11 3ii7_A Kelch-like protein 7; p 99.1 2.5E-08 8.6E-13 90.2 23.5 220 118-366 23-257 (306)
12 2e31_A FBS1, F-box only protei 99.1 5.9E-11 2E-15 105.3 5.2 50 9-58 49-99 (297)
13 2uvk_A YJHT; unknown function, 99.1 1.6E-08 5.5E-13 93.7 20.2 242 107-367 16-327 (357)
14 4asc_A Kelch repeat and BTB do 99.0 5.9E-08 2E-12 88.2 22.8 231 112-364 6-251 (315)
15 2woz_A Kelch repeat and BTB do 99.0 1.4E-07 4.7E-12 85.9 21.9 234 110-365 15-262 (318)
16 3v7d_B Cell division control p 98.8 1.4E-05 4.8E-10 76.1 30.4 43 10-52 14-57 (464)
17 2ovr_B FBW7, F-BOX/WD repeat p 98.8 2.2E-05 7.5E-10 74.5 31.6 282 9-336 17-312 (445)
18 2uvk_A YJHT; unknown function, 98.7 1.8E-06 6E-11 79.8 22.0 151 183-339 168-349 (357)
19 2zwa_A Leucine carboxyl methyl 98.7 1E-06 3.4E-11 89.0 21.7 213 109-340 396-643 (695)
20 1p22_A F-BOX/WD-repeat protein 98.6 1.7E-05 5.8E-10 75.1 23.4 46 9-54 9-58 (435)
21 3l2o_B F-box only protein 4; s 98.1 1.2E-06 4.2E-11 76.8 3.1 51 9-59 3-53 (312)
22 1k3i_A Galactose oxidase precu 98.0 5.7E-05 1.9E-09 75.8 14.3 195 120-339 220-448 (656)
23 2zwa_A Leucine carboxyl methyl 97.9 0.00023 7.9E-09 71.7 16.0 178 182-366 411-617 (695)
24 1k3i_A Galactose oxidase precu 97.9 7.7E-05 2.6E-09 74.8 11.8 216 108-340 251-505 (656)
25 2ast_B S-phase kinase-associat 97.6 2.2E-05 7.6E-10 71.6 3.5 43 7-49 5-47 (336)
26 2p1m_B Transport inhibitor res 97.1 0.00019 6.4E-09 70.8 3.0 37 8-44 3-40 (594)
27 3ogk_B Coronatine-insensitive 96.5 0.00089 3E-08 65.9 2.5 34 11-44 13-47 (592)
28 2z2n_A Virginiamycin B lyase; 95.9 0.71 2.4E-05 39.9 18.6 188 108-336 107-299 (299)
29 4gga_A P55CDC, cell division c 94.8 2.4 8.2E-05 39.0 20.9 208 95-337 100-315 (420)
30 1q7f_A NHL, brain tumor CG1071 94.2 2.4 8.1E-05 36.5 22.5 201 108-341 38-247 (286)
31 3jrp_A Fusion protein of prote 92.9 4.7 0.00016 35.7 18.9 139 182-333 78-241 (379)
32 3v65_B Low-density lipoprotein 92.6 6 0.0002 36.2 19.8 187 110-338 87-283 (386)
33 3dsm_A Uncharacterized protein 92.0 6.2 0.00021 34.9 22.6 140 182-337 63-217 (328)
34 4aez_A CDC20, WD repeat-contai 91.9 7.1 0.00024 35.4 21.8 190 109-336 103-297 (401)
35 1q7f_A NHL, brain tumor CG1071 91.9 5.5 0.00019 34.1 20.3 190 108-333 86-281 (286)
36 3m0c_C LDL receptor, low-densi 91.0 14 0.0005 37.3 21.7 159 182-361 492-658 (791)
37 3jro_A Fusion protein of prote 90.4 9.9 0.00034 38.1 16.9 139 182-333 76-239 (753)
38 3v65_B Low-density lipoprotein 89.3 13 0.00043 34.0 17.8 209 108-360 125-343 (386)
39 3v64_C Agrin; beta propeller, 89.3 12 0.0004 33.6 19.6 187 110-338 44-240 (349)
40 1ri6_A Putative isomerase YBHE 89.2 10 0.00036 32.9 16.8 105 233-340 198-318 (343)
41 3q7m_A Lipoprotein YFGL, BAMB; 89.1 11 0.00038 33.8 14.9 109 214-337 48-167 (376)
42 3hfq_A Uncharacterized protein 88.7 4.6 0.00016 35.7 11.9 104 234-338 17-124 (347)
43 1rwi_B Serine/threonine-protei 88.2 11 0.00036 31.7 14.8 185 108-334 75-266 (270)
44 3g4e_A Regucalcin; six bladed 87.5 13 0.00045 32.1 22.2 195 108-340 22-238 (297)
45 3mbr_X Glutamine cyclotransfer 87.5 12 0.00043 31.7 15.5 112 217-340 28-142 (243)
46 3hfq_A Uncharacterized protein 87.1 15 0.00051 32.2 20.3 116 219-341 197-328 (347)
47 3dsm_A Uncharacterized protein 86.8 16 0.00054 32.2 15.0 101 232-337 14-119 (328)
48 3e5z_A Putative gluconolactona 86.6 14 0.00049 31.6 19.8 190 118-341 49-255 (296)
49 1k8k_C P40, ARP2/3 complex 41 86.2 16 0.00054 32.2 14.0 99 233-334 28-129 (372)
50 3scy_A Hypothetical bacterial 86.1 17 0.0006 32.0 15.5 114 219-339 221-346 (361)
51 3hrp_A Uncharacterized protein 86.0 7.5 0.00026 35.8 11.8 109 218-338 140-255 (409)
52 1n7d_A LDL receptor, low-densi 86.0 3.5 0.00012 41.2 10.1 132 215-359 500-638 (699)
53 3nol_A Glutamine cyclotransfer 85.1 18 0.0006 31.2 14.4 111 218-340 51-164 (262)
54 3v64_C Agrin; beta propeller, 85.1 21 0.00071 32.0 19.6 210 107-360 81-300 (349)
55 1ijq_A LDL receptor, low-densi 85.1 19 0.00065 31.6 18.9 185 112-338 3-201 (316)
56 1pjx_A Dfpase, DIISOPROPYLFLUO 84.6 18 0.00063 31.0 15.6 194 118-339 45-264 (314)
57 1npe_A Nidogen, entactin; glyc 84.3 18 0.00061 30.5 18.6 195 112-338 3-204 (267)
58 2qc5_A Streptogramin B lactona 84.2 18 0.00062 30.6 14.0 109 219-339 30-140 (300)
59 3p5b_L Low density lipoprotein 83.9 26 0.00087 32.1 20.9 128 219-361 213-346 (400)
60 2ojh_A Uncharacterized protein 83.8 18 0.00062 30.2 18.8 195 110-339 52-265 (297)
61 2z2n_A Virginiamycin B lyase; 83.3 20 0.00068 30.3 22.1 109 219-341 151-263 (299)
62 4e54_B DNA damage-binding prot 83.2 14 0.00047 34.0 12.4 195 109-335 130-330 (435)
63 2iwa_A Glutamine cyclotransfer 82.4 23 0.00079 30.5 14.4 110 220-340 32-144 (266)
64 3m0c_C LDL receptor, low-densi 81.9 46 0.0016 33.6 21.8 113 215-339 475-596 (791)
65 2dg1_A DRP35, lactonase; beta 81.8 20 0.00068 31.2 12.4 112 219-338 55-177 (333)
66 4e54_B DNA damage-binding prot 81.6 17 0.00057 33.4 12.3 56 280-337 378-435 (435)
67 1ijq_A LDL receptor, low-densi 81.4 27 0.00092 30.6 21.1 129 219-361 131-264 (316)
68 3nok_A Glutaminyl cyclase; bet 81.2 26 0.00088 30.2 14.0 108 218-340 63-173 (268)
69 1rwi_B Serine/threonine-protei 80.4 24 0.00082 29.4 17.7 190 105-337 29-227 (270)
70 1npe_A Nidogen, entactin; glyc 80.3 25 0.00086 29.6 21.5 193 107-339 44-246 (267)
71 3bws_A Protein LP49; two-domai 79.7 35 0.0012 30.8 18.4 192 108-338 178-396 (433)
72 3jrp_A Fusion protein of prote 79.2 32 0.0011 30.1 13.9 98 234-334 32-136 (379)
73 1l0q_A Surface layer protein; 78.2 36 0.0012 30.1 18.9 187 110-337 85-280 (391)
74 3vgz_A Uncharacterized protein 78.2 33 0.0011 29.7 24.1 203 107-337 97-308 (353)
75 3fm0_A Protein CIAO1; WDR39,SG 78.1 35 0.0012 30.0 15.4 94 234-330 126-223 (345)
76 3e5z_A Putative gluconolactona 77.3 30 0.001 29.5 11.9 108 219-338 38-167 (296)
77 1l0q_A Surface layer protein; 76.9 39 0.0013 29.9 18.8 176 118-336 53-237 (391)
78 2qc5_A Streptogramin B lactona 76.3 34 0.0012 28.8 21.4 191 105-339 25-224 (300)
79 3ei3_B DNA damage-binding prot 76.2 41 0.0014 29.7 20.5 183 118-334 95-284 (383)
80 3g4e_A Regucalcin; six bladed 75.9 37 0.0013 29.1 14.0 102 219-333 24-140 (297)
81 3v9f_A Two-component system se 75.9 67 0.0023 32.1 19.2 143 183-340 469-619 (781)
82 2p4o_A Hypothetical protein; p 75.7 39 0.0013 29.2 14.1 104 219-334 42-149 (306)
83 3zwl_B Eukaryotic translation 75.6 40 0.0014 29.3 20.4 68 267-337 186-254 (369)
84 4a0p_A LRP6, LRP-6, low-densit 75.5 63 0.0022 31.6 22.1 185 111-336 7-201 (628)
85 3sov_A LRP-6, low-density lipo 75.2 43 0.0015 29.4 18.4 126 219-360 133-263 (318)
86 3dwl_C Actin-related protein 2 74.9 15 0.00052 32.5 9.6 139 182-333 32-178 (377)
87 3u4y_A Uncharacterized protein 74.8 40 0.0014 29.0 16.4 111 219-339 186-311 (331)
88 3sjl_D Methylamine dehydrogena 74.5 43 0.0015 30.5 12.4 120 218-344 236-376 (386)
89 3q7m_A Lipoprotein YFGL, BAMB; 74.3 47 0.0016 29.5 14.0 137 183-337 198-342 (376)
90 3u4y_A Uncharacterized protein 74.1 42 0.0014 28.8 17.8 185 110-335 9-210 (331)
91 4ggc_A P55CDC, cell division c 73.8 41 0.0014 28.5 21.4 31 104-134 29-60 (318)
92 1k8k_C P40, ARP2/3 complex 41 73.7 27 0.00092 30.6 10.9 70 267-338 19-89 (372)
93 1kv9_A Type II quinohemoprotei 73.5 36 0.0012 33.5 12.6 111 213-337 60-192 (668)
94 2fp8_A Strictosidine synthase; 73.1 36 0.0012 29.6 11.4 110 219-338 29-180 (322)
95 2fp8_A Strictosidine synthase; 72.3 48 0.0016 28.7 14.9 95 234-341 164-278 (322)
96 3tc9_A Hypothetical hydrolase; 72.0 61 0.0021 29.8 15.4 110 219-338 149-263 (430)
97 1yfq_A Cell cycle arrest prote 71.7 48 0.0016 28.5 17.5 99 234-336 169-286 (342)
98 4aow_A Guanine nucleotide-bind 71.5 48 0.0016 28.4 16.4 93 234-334 236-339 (340)
99 3p5b_L Low density lipoprotein 70.9 62 0.0021 29.4 22.1 188 110-339 83-284 (400)
100 3bws_A Protein LP49; two-domai 70.7 53 0.0018 29.5 12.4 110 219-337 133-248 (433)
101 3jro_A Fusion protein of prote 70.4 80 0.0027 31.4 14.5 97 234-333 30-133 (753)
102 2aq5_A Coronin-1A; WD40 repeat 69.9 61 0.0021 28.9 20.3 147 182-340 153-309 (402)
103 2ad6_A Methanol dehydrogenase 69.9 48 0.0016 31.9 12.3 113 213-337 56-190 (571)
104 3fm0_A Protein CIAO1; WDR39,SG 69.8 57 0.0019 28.6 14.5 100 234-336 82-185 (345)
105 1gxr_A ESG1, transducin-like e 69.8 51 0.0018 28.1 12.9 101 234-337 71-177 (337)
106 1kb0_A Quinohemoprotein alcoho 69.8 31 0.0011 34.1 11.1 114 213-337 71-204 (677)
107 3i2n_A WD repeat-containing pr 69.4 55 0.0019 28.2 17.5 96 234-334 138-245 (357)
108 3k26_A Polycomb protein EED; W 69.4 56 0.0019 28.3 16.5 63 268-332 299-366 (366)
109 1ri6_A Putative isomerase YBHE 68.7 55 0.0019 28.0 11.9 110 219-338 48-167 (343)
110 3fvz_A Peptidyl-glycine alpha- 68.4 60 0.002 28.2 14.2 163 108-289 152-322 (329)
111 2hqs_A Protein TOLB; TOLB, PAL 68.2 70 0.0024 29.0 19.9 183 120-340 204-395 (415)
112 3f3f_A Nucleoporin SEH1; struc 67.2 58 0.002 27.7 13.5 65 268-334 71-145 (351)
113 1yiq_A Quinohemoprotein alcoho 67.1 46 0.0016 32.9 11.7 113 213-336 64-196 (689)
114 1gxr_A ESG1, transducin-like e 67.0 59 0.002 27.7 19.0 140 182-339 118-262 (337)
115 4hw6_A Hypothetical protein, I 66.9 74 0.0025 29.3 12.5 112 214-335 142-262 (433)
116 3mbr_X Glutamine cyclotransfer 66.6 58 0.002 27.5 16.4 140 182-341 42-189 (243)
117 3nok_A Glutaminyl cyclase; bet 66.2 63 0.0022 27.7 13.5 136 185-341 77-220 (268)
118 2mad_H Methylamine dehydrogena 65.3 77 0.0026 28.4 13.2 71 267-338 278-356 (373)
119 4gqb_B Methylosome protein 50; 65.1 73 0.0025 28.1 17.6 100 234-338 191-295 (344)
120 4g56_B MGC81050 protein; prote 65.1 73 0.0025 28.1 16.7 196 109-338 104-307 (357)
121 3dr2_A Exported gluconolactona 64.3 43 0.0015 28.8 9.9 109 219-339 55-185 (305)
122 1n7d_A LDL receptor, low-densi 64.2 64 0.0022 32.0 12.1 57 214-276 543-603 (699)
123 3dwl_C Actin-related protein 2 63.6 10 0.00035 33.7 5.8 98 234-334 32-133 (377)
124 1jmx_B Amine dehydrogenase; ox 62.9 57 0.002 28.0 10.6 106 219-333 10-135 (349)
125 3mmy_A MRNA export factor; mRN 62.8 56 0.0019 28.2 10.5 71 268-340 54-125 (368)
126 3dr2_A Exported gluconolactona 62.6 73 0.0025 27.2 17.1 103 234-341 168-276 (305)
127 4a11_B DNA excision repair pro 62.3 82 0.0028 27.7 19.6 98 234-335 266-368 (408)
128 3o4h_A Acylamino-acid-releasin 60.7 1.1E+02 0.0039 28.8 15.1 184 111-338 123-320 (582)
129 3mmy_A MRNA export factor; mRN 60.0 83 0.0029 27.0 19.5 29 308-336 279-308 (368)
130 2dg1_A DRP35, lactonase; beta 59.9 83 0.0029 27.0 17.5 204 109-341 54-272 (333)
131 2pm9_A Protein WEB1, protein t 59.9 93 0.0032 27.5 15.5 94 236-334 241-339 (416)
132 3sov_A LRP-6, low-density lipo 59.8 89 0.0031 27.3 20.3 188 111-338 5-203 (318)
133 3f3f_A Nucleoporin SEH1; struc 59.5 81 0.0028 26.7 12.3 65 267-333 22-91 (351)
134 3lrv_A PRE-mRNA-splicing facto 59.4 65 0.0022 28.0 10.3 97 233-334 147-246 (343)
135 1flg_A Protein (quinoprotein e 58.9 72 0.0025 30.8 11.2 112 213-337 62-198 (582)
136 1r5m_A SIR4-interacting protei 58.8 96 0.0033 27.3 16.7 185 109-331 216-424 (425)
137 3mkq_A Coatomer beta'-subunit; 58.5 1.5E+02 0.005 29.3 21.5 99 233-337 161-264 (814)
138 4aez_A CDC20, WD repeat-contai 57.7 1E+02 0.0035 27.4 21.1 99 233-335 282-383 (401)
139 2oiz_A Aromatic amine dehydrog 57.6 1E+02 0.0035 27.3 13.4 72 267-340 265-342 (361)
140 3nol_A Glutamine cyclotransfer 57.4 91 0.0031 26.6 15.6 139 182-341 64-211 (262)
141 3bg1_A Protein SEC13 homolog; 56.0 97 0.0033 26.5 15.2 53 280-332 189-247 (316)
142 3hrp_A Uncharacterized protein 54.9 1.2E+02 0.0042 27.4 13.0 197 108-340 139-362 (409)
143 2pm7_B Protein transport prote 54.9 97 0.0033 26.2 13.4 97 234-333 30-133 (297)
144 2ghs_A AGR_C_1268P; regucalcin 52.2 1.2E+02 0.004 26.3 18.6 198 107-340 57-268 (326)
145 1got_B GT-beta; complex (GTP-b 51.4 1.2E+02 0.0041 26.2 20.8 95 234-335 163-260 (340)
146 2ghs_A AGR_C_1268P; regucalcin 51.0 1.2E+02 0.0042 26.2 14.0 105 219-338 60-174 (326)
147 3fvz_A Peptidyl-glycine alpha- 49.8 1.3E+02 0.0043 26.0 20.6 113 219-338 154-283 (329)
148 3scy_A Hypothetical bacterial 49.4 1.3E+02 0.0045 26.1 13.5 95 234-332 28-129 (361)
149 1nir_A Nitrite reductase; hemo 48.6 1.8E+02 0.0062 27.5 12.4 112 219-335 334-461 (543)
150 1sq9_A Antiviral protein SKI8; 48.4 1.4E+02 0.0048 26.1 17.2 96 235-334 258-397 (397)
151 2hqs_A Protein TOLB; TOLB, PAL 47.6 1.6E+02 0.0054 26.5 18.3 184 119-339 159-351 (415)
152 1pgu_A Actin interacting prote 47.5 1.8E+02 0.0062 27.2 13.1 95 234-333 466-573 (615)
153 3lrv_A PRE-mRNA-splicing facto 47.4 1.4E+02 0.0047 25.8 14.3 196 105-337 89-299 (343)
154 4h5i_A Guanine nucleotide-exch 46.7 1.5E+02 0.0052 26.0 15.3 121 234-357 196-322 (365)
155 1evh_A WH1 domain, protein (ME 46.6 26 0.00088 25.7 4.4 42 119-169 11-52 (112)
156 2hz6_A Endoplasmic reticulum t 46.3 5.5 0.00019 36.1 0.8 30 214-249 4-35 (369)
157 3ow8_A WD repeat-containing pr 45.8 1.1E+02 0.0039 26.2 9.5 66 268-335 48-114 (321)
158 1r5m_A SIR4-interacting protei 45.6 1.6E+02 0.0053 25.9 21.1 99 232-337 224-324 (425)
159 2kwv_A RAD30 homolog B, DNA po 45.2 13 0.00044 22.2 1.9 21 8-28 18-38 (48)
160 2hes_X YDR267CP; beta-propelle 44.9 1.5E+02 0.0051 25.5 11.3 70 267-338 118-190 (330)
161 1egx_A VAsp, vasodilator-stimu 44.8 35 0.0012 25.1 4.9 43 119-169 11-53 (115)
162 3no2_A Uncharacterized protein 44.7 92 0.0031 26.4 8.5 109 216-335 84-198 (276)
163 2iwa_A Glutamine cyclotransfer 44.7 1.5E+02 0.005 25.3 14.6 139 182-340 43-190 (266)
164 1p22_A F-BOX/WD-repeat protein 44.0 1.8E+02 0.0061 26.1 18.2 110 215-336 178-289 (435)
165 3s94_A LRP-6, low-density lipo 43.8 2.3E+02 0.008 27.4 22.4 208 107-358 357-573 (619)
166 1w6s_A Methanol dehydrogenase 43.7 1.8E+02 0.0061 28.1 11.2 113 213-337 56-196 (599)
167 2ovr_B FBW7, F-BOX/WD repeat p 42.6 1.9E+02 0.0065 26.0 20.5 111 215-333 324-443 (445)
168 4a11_B DNA excision repair pro 42.5 1.7E+02 0.0058 25.4 18.1 68 267-336 256-327 (408)
169 3iuj_A Prolyl endopeptidase; h 41.8 2.6E+02 0.0088 27.3 18.2 116 218-340 290-413 (693)
170 2z3z_A Dipeptidyl aminopeptida 41.7 2.5E+02 0.0085 27.1 22.0 107 233-339 233-351 (706)
171 3mkq_A Coatomer beta'-subunit; 41.0 2.7E+02 0.0092 27.3 18.3 96 234-335 118-220 (814)
172 1erj_A Transcriptional repress 40.7 1.9E+02 0.0066 25.5 20.1 192 108-336 132-345 (393)
173 1pgu_A Actin interacting prote 40.6 2.3E+02 0.008 26.4 19.3 106 219-333 499-615 (615)
174 3kvp_A Uncharacterized protein 40.2 62 0.0021 21.1 4.7 17 324-340 41-57 (72)
175 3s94_A LRP-6, low-density lipo 40.0 2.7E+02 0.0092 27.0 21.6 108 219-338 403-516 (619)
176 3frx_A Guanine nucleotide-bind 39.9 1.8E+02 0.006 24.9 11.0 65 269-335 31-99 (319)
177 3s3x_D Psalmotoxin-1; acid-sen 39.8 15 0.0005 19.8 1.5 22 107-128 15-36 (37)
178 1got_B GT-beta; complex (GTP-b 39.5 1.8E+02 0.0063 25.0 15.1 98 234-336 76-177 (340)
179 4a2l_A BT_4663, two-component 38.9 3E+02 0.01 27.3 18.2 204 108-339 223-443 (795)
180 1nir_A Nitrite reductase; hemo 38.5 2.6E+02 0.0089 26.4 18.7 192 109-338 147-361 (543)
181 3bg1_A Protein SEC13 homolog; 37.7 1.5E+02 0.0051 25.3 9.0 68 267-336 24-94 (316)
182 2hes_X YDR267CP; beta-propelle 37.2 2E+02 0.0068 24.7 11.3 60 280-339 221-287 (330)
183 2dk7_A Transcription elongatio 37.1 30 0.001 23.1 3.0 19 316-334 23-41 (73)
184 2pm7_B Protein transport prote 36.1 1.9E+02 0.0066 24.2 19.1 64 268-333 170-239 (297)
185 4gga_A P55CDC, cell division c 35.8 2.4E+02 0.0081 25.1 14.1 88 247-337 94-183 (420)
186 4gqb_B Methylosome protein 50; 35.7 2.2E+02 0.0076 24.8 13.0 58 280-337 103-163 (344)
187 2qe8_A Uncharacterized protein 35.5 1.9E+02 0.0063 25.2 9.3 75 215-289 71-154 (343)
188 1pby_B Quinohemoprotein amine 35.2 1.7E+02 0.0059 24.6 9.0 96 236-337 220-315 (337)
189 4a0p_A LRP6, LRP-6, low-densit 34.7 3.3E+02 0.011 26.4 24.6 209 107-360 45-262 (628)
190 3v7d_B Cell division control p 34.6 2.5E+02 0.0087 25.2 22.9 96 233-337 330-426 (464)
191 2z3z_A Dipeptidyl aminopeptida 33.5 3.3E+02 0.011 26.2 20.2 189 119-335 235-438 (706)
192 3ow8_A WD repeat-containing pr 33.3 2.3E+02 0.0078 24.2 20.2 97 234-337 185-284 (321)
193 2pbi_B Guanine nucleotide-bind 32.8 2.4E+02 0.0084 24.4 17.8 91 234-329 261-354 (354)
194 3sfz_A APAF-1, apoptotic pepti 32.5 4.6E+02 0.016 27.4 21.1 192 108-338 624-834 (1249)
195 2be1_A Serine/threonine-protei 31.8 1E+02 0.0034 27.5 6.7 31 312-342 110-140 (339)
196 3vl1_A 26S proteasome regulato 31.6 2.7E+02 0.0091 24.5 18.5 96 233-332 311-419 (420)
197 1sq9_A Antiviral protein SKI8; 31.3 2.6E+02 0.0089 24.2 17.8 69 262-335 191-270 (397)
198 2jp2_A Spred-2, sprouty-relate 31.1 59 0.002 24.3 4.2 44 118-169 19-65 (126)
199 1ddw_A GLGF-domain protein hom 30.6 99 0.0034 22.8 5.4 39 119-168 11-50 (120)
200 3v9f_A Two-component system se 29.1 4.3E+02 0.015 26.1 21.0 202 110-339 323-531 (781)
201 3dm0_A Maltose-binding peripla 29.1 4E+02 0.014 25.7 11.7 66 269-336 396-465 (694)
202 2pm9_A Protein WEB1, protein t 29.0 1.4E+02 0.0048 26.3 7.5 98 234-334 44-147 (416)
203 2bkl_A Prolyl endopeptidase; m 28.4 4.1E+02 0.014 25.7 20.6 143 183-339 252-404 (695)
204 2ynn_A Coatomer subunit beta'; 27.7 2.7E+02 0.0093 23.3 13.1 94 234-334 34-130 (304)
205 4ggc_A P55CDC, cell division c 27.6 2.6E+02 0.009 23.1 13.8 58 280-337 45-103 (318)
206 3sfz_A APAF-1, apoptotic pepti 27.3 5.5E+02 0.019 26.8 17.7 102 219-332 809-913 (1249)
207 1yfq_A Cell cycle arrest prote 27.3 2.8E+02 0.0095 23.3 12.8 72 267-340 22-97 (342)
208 3c75_H MADH, methylamine dehyd 27.2 3.6E+02 0.012 24.6 12.8 103 234-337 285-407 (426)
209 3k26_A Polycomb protein EED; W 27.2 2.9E+02 0.0098 23.4 20.3 65 268-334 241-320 (366)
210 2ymu_A WD-40 repeat protein; u 26.9 3.8E+02 0.013 24.8 22.8 99 234-340 406-506 (577)
211 2ojh_A Uncharacterized protein 26.5 2.6E+02 0.0088 22.7 18.3 183 119-339 22-213 (297)
212 3azo_A Aminopeptidase; POP fam 26.2 4.3E+02 0.015 25.1 21.1 112 219-339 252-376 (662)
213 2pbi_B Guanine nucleotide-bind 25.7 3.3E+02 0.011 23.6 19.4 95 234-335 175-274 (354)
214 3gre_A Serine/threonine-protei 25.5 3.1E+02 0.011 24.2 9.3 100 233-337 190-297 (437)
215 3hxj_A Pyrrolo-quinoline quino 25.5 3E+02 0.01 23.1 9.9 18 110-127 107-125 (330)
216 1erj_A Transcriptional repress 25.1 2.9E+02 0.01 24.3 8.9 66 267-336 134-200 (393)
217 4h5i_A Guanine nucleotide-exch 24.9 3.5E+02 0.012 23.6 10.7 66 267-335 144-209 (365)
218 1e0n_A Hypothetical protein; Y 23.9 67 0.0023 16.6 2.4 17 319-335 6-22 (27)
219 2vdu_B TRNA (guanine-N(7)-)-me 23.5 4E+02 0.014 23.8 21.0 98 234-335 170-274 (450)
220 3hxj_A Pyrrolo-quinoline quino 23.4 3.3E+02 0.011 22.8 11.2 31 309-339 221-251 (330)
221 1i2h_A PSD-ZIP45(homer-1C/VESL 23.2 1.5E+02 0.0052 23.3 5.4 39 119-168 16-55 (168)
222 4a2l_A BT_4663, two-component 23.0 5.5E+02 0.019 25.3 19.9 145 184-339 236-393 (795)
223 3odt_A Protein DOA1; ubiquitin 22.8 3.2E+02 0.011 22.4 22.3 107 215-336 109-218 (313)
224 3odt_A Protein DOA1; ubiquitin 22.7 3.2E+02 0.011 22.4 15.1 96 234-337 164-260 (313)
225 4aow_A Guanine nucleotide-bind 22.7 3.4E+02 0.012 22.7 12.4 71 268-340 51-125 (340)
226 2xzm_R RACK1; ribosome, transl 22.1 3.7E+02 0.013 22.9 12.0 67 267-335 38-110 (343)
227 2xzh_A Clathrin heavy chain 1; 21.5 2.9E+02 0.01 24.7 7.5 31 306-336 261-294 (365)
228 3vl1_A 26S proteasome regulato 21.4 4.1E+02 0.014 23.2 21.2 70 267-340 258-332 (420)
229 3gre_A Serine/threonine-protei 21.1 4.3E+02 0.015 23.3 11.2 67 267-337 181-250 (437)
230 3c5m_A Oligogalacturonate lyas 21.0 4E+02 0.014 22.9 10.6 146 182-340 167-337 (396)
231 3vgz_A Uncharacterized protein 21.0 3.8E+02 0.013 22.6 18.0 114 217-337 97-220 (353)
232 2aq5_A Coronin-1A; WD40 repeat 20.7 4.2E+02 0.014 23.1 23.1 96 234-334 153-256 (402)
233 3i2n_A WD repeat-containing pr 20.7 3.8E+02 0.013 22.5 19.9 98 234-334 233-355 (357)
234 4g56_B MGC81050 protein; prote 20.6 4.1E+02 0.014 22.9 17.2 92 234-333 248-344 (357)
235 1jmx_B Amine dehydrogenase; ox 20.5 3.8E+02 0.013 22.5 13.6 142 182-337 20-180 (349)
236 1nr0_A Actin interacting prote 20.2 2.8E+02 0.0094 26.4 8.0 63 267-332 459-522 (611)
237 3frx_A Guanine nucleotide-bind 20.1 4E+02 0.014 22.5 19.8 95 234-335 175-270 (319)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.29 E-value=2.1e-09 Score=97.58 Aligned_cols=198 Identities=12% Similarity=0.059 Sum_probs=125.8
Q ss_pred CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCccccc
Q 038188 119 GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRVS 198 (384)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 198 (384)
+.++++||.|++|..+|+++..... .... .++ . +++.+...... .....+++|+..+++|+.+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~--~~~----~-~iyv~GG~~~~-----~~~~~~~~yd~~~~~W~~~ 152 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNR-----IGVG--VID----G-HIYAVGGSHGC-----IHHNSVERYEPERDEWHLV 152 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBT-----CEEE--EET----T-EEEEECCEETT-----EECCCEEEEETTTTEEEEC
T ss_pred ceEEEECCCCCeEeECCCCCcCccc-----cEEE--EEC----C-EEEEEcCCCCC-----cccccEEEECCCCCeEeEC
Confidence 3689999999999999877653211 1111 111 1 34444322111 1146799999999999998
Q ss_pred cCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeeec-CCCCCCCCceeEEEECCeEEEEEec-
Q 038188 199 KGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQ-RPCIPYTPFESLAPLNGSIALLHLD- 276 (384)
Q Consensus 199 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~-~P~~~~~~~~~l~~~~G~L~l~~~~- 276 (384)
..++.. .....++.++|.+|.+...........+..||+.+++|+.++ +|... .....+..+|+|+++...
T Consensus 153 ~~~p~~-----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~ 225 (308)
T 1zgk_A 153 APMLTR-----RIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR--SGAGVCVLHNCIYAAGGYD 225 (308)
T ss_dssp CCCSSC-----CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEECCBC
T ss_pred CCCCcc-----ccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc--ccceEEEECCEEEEEeCCC
Confidence 755322 122356778999999987543333678999999999999874 34332 233556779999998532
Q ss_pred CCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEe------CCeEEEEECCCCeEEEEeecc
Q 038188 277 ESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESI------NGKLLLYDLVVQEMRDLGRFS 342 (384)
Q Consensus 277 ~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v~~~~ 342 (384)
.....-++|+++- ..|.++..++ .+...... +.-+++|++..+ ...+..||+++++|+++....
T Consensus 226 ~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 297 (308)
T 1zgk_A 226 GQDQLNSVERYDVETETWTFVAPMK-HRRSALGI-TVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMT 297 (308)
T ss_dssp SSSBCCCEEEEETTTTEEEECCCCS-SCCBSCEE-EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS
T ss_pred CCCccceEEEEeCCCCcEEECCCCC-CCccceEE-EEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCC
Confidence 2222345777765 8899865332 22122222 233777776643 346999999999999986543
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.25 E-value=1.3e-09 Score=98.90 Aligned_cols=211 Identities=12% Similarity=0.091 Sum_probs=132.5
Q ss_pred eccccceEEEeeC------CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEeccccccc
Q 038188 106 LGPYDGIFCLCDG------GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDA 179 (384)
Q Consensus 106 ~~s~~GLl~~~~~------~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 179 (384)
....+|.|.+..+ +.++++||.|++|..+|+.|..... ... ..++ . +++.+..... ..
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~--~~~~----~-~iyv~GG~~~----~~ 114 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS-----LAA--CAAE----G-KIYTSGGSEV----GN 114 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS-----CEE--EEET----T-EEEEECCBBT----TB
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc-----eeE--EEEC----C-EEEEECCCCC----CC
Confidence 3345666655543 5789999999999999877643211 111 1111 1 3444432110 11
Q ss_pred ccccEEEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCC----ccEEEEEEcCCceeeeec-CCC
Q 038188 180 YEHAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFH----SKLILLFRISDEEFQEIQ-RPC 254 (384)
Q Consensus 180 ~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~----~~~il~fD~~~~~~~~i~-~P~ 254 (384)
.....+++|+..+++|+.+..++.. .....++.++|.+|.+........ ...+..||+.+++|+.++ +|.
T Consensus 115 ~~~~~~~~~d~~~~~W~~~~~~p~~-----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 189 (306)
T 3ii7_A 115 SALYLFECYDTRTESWHTKPSMLTQ-----RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIE 189 (306)
T ss_dssp SCCCCEEEEETTTTEEEEECCCSSC-----CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSS
T ss_pred cEeeeEEEEeCCCCceEeCCCCcCC-----cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccc
Confidence 2257799999999999998655322 122356788999999987543332 577999999999999984 443
Q ss_pred CCCCCceeEEEECCeEEEEEecC-CCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEe------CCeE
Q 038188 255 IPYTPFESLAPLNGSIALLHLDE-SNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESI------NGKL 325 (384)
Q Consensus 255 ~~~~~~~~l~~~~G~L~l~~~~~-~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l 325 (384)
.. ....++..+|+|+++.... ....-++|+++- ..|..+..+ |.+.......+ -++.|++..+ ...+
T Consensus 190 ~r--~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~ 265 (306)
T 3ii7_A 190 AR--KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM-PWKGVTVKCAA-VGSIVYVLAGFQGVGRLGHI 265 (306)
T ss_dssp CC--BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC-SCCBSCCEEEE-ETTEEEEEECBCSSSBCCEE
T ss_pred hh--hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC-CCCccceeEEE-ECCEEEEEeCcCCCeeeeeE
Confidence 32 3445677799999984321 112235677765 789986533 22212222223 3777766643 2469
Q ss_pred EEEECCCCeEEEEeec
Q 038188 326 LLYDLVVQEMRDLGRF 341 (384)
Q Consensus 326 ~~yd~~t~~~~~v~~~ 341 (384)
..||+++++|+.+...
T Consensus 266 ~~yd~~~~~W~~~~~~ 281 (306)
T 3ii7_A 266 LEYNTETDKWVANSKV 281 (306)
T ss_dssp EEEETTTTEEEEEEEE
T ss_pred EEEcCCCCeEEeCCCc
Confidence 9999999999998664
No 3
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.25 E-value=3.4e-09 Score=96.52 Aligned_cols=197 Identities=9% Similarity=-0.041 Sum_probs=125.4
Q ss_pred eEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCcccccc
Q 038188 120 LITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRVSK 199 (384)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 199 (384)
.++++||.|++|..+|+.|... ...+.... +. +++.+...... ........+++|+..+++|+.+.
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r--------~~~~~~~~---~~-~lyv~GG~~~~--~~~~~~~~~~~~d~~~~~W~~~~ 133 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPR--------CLFGLGEA---LN-SIYVVGGREIK--DGERCLDSVMCYDRLSFKWGESD 133 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCE--------ESCEEEEE---TT-EEEEECCEESS--TTCCBCCCEEEEETTTTEEEECC
T ss_pred ceEEecCCCCeEEECCCCCcch--------hceeEEEE---CC-EEEEEeCCcCC--CCCcccceEEEECCCCCcEeECC
Confidence 3899999999999998876431 11111111 12 44444322110 01122577999999999999987
Q ss_pred CCccccceeecCCcceEEECceEEEEEee-cCCCCccEEEEEEcCCceeeeec-CCCCCCCCceeEEEECCeEEEEEecC
Q 038188 200 GNIKWIPYVFESYYNNANLNGVFYWFVSR-AGDFHSKLILLFRISDEEFQEIQ-RPCIPYTPFESLAPLNGSIALLHLDE 277 (384)
Q Consensus 200 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~-~~~~~~~~il~fD~~~~~~~~i~-~P~~~~~~~~~l~~~~G~L~l~~~~~ 277 (384)
.++.. .....++.++|.+|.+.+. ........+..||+.+.+|+.++ +|... .....+..+|+|+++....
T Consensus 134 ~~p~~-----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~ 206 (315)
T 4asc_A 134 PLPYV-----VYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR--SLFGATVHDGRIIVAAGVT 206 (315)
T ss_dssp CCSSC-----CBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEEEEEC
T ss_pred CCCCc-----ccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch--hceEEEEECCEEEEEeccC
Confidence 65322 1223577899999999875 33344578999999999999874 45432 3345667899999995433
Q ss_pred C-CCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEeC---------------CeEEEEECCCCeEEEEe
Q 038188 278 S-NQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESIN---------------GKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 278 ~-~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~---------------~~l~~yd~~t~~~~~v~ 339 (384)
. ...-++|+++- ..|..+..+ |.+...+...+ -+++|++..+. ..+..||+++++|+.+.
T Consensus 207 ~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 207 DTGLTSSAEVYSITDNKWAPFEAF-PQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp SSSEEEEEEEEETTTTEEEEECCC-SSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred CCCccceEEEEECCCCeEEECCCC-CCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 2 23446888866 789997543 22212222233 36677665321 24889999999999983
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.23 E-value=3e-09 Score=96.08 Aligned_cols=208 Identities=10% Similarity=0.043 Sum_probs=130.8
Q ss_pred ccccceEEEeeC-------CeEEEEccCccc---ccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccc
Q 038188 107 GPYDGIFCLCDG-------GLITLWNPATKE---CRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKI 176 (384)
Q Consensus 107 ~s~~GLl~~~~~-------~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~ 176 (384)
...+|.+.+..+ +.++++||.|++ |..+++.+.... ....... +. +++.+......
T Consensus 59 ~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~--------~~~~~~~---~~-~lyv~GG~~~~-- 124 (301)
T 2vpj_A 59 VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRG--------LAGATTL---GD-MIYVSGGFDGS-- 124 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCB--------SCEEEEE---TT-EEEEECCBCSS--
T ss_pred EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCcc--------ceeEEEE---CC-EEEEEcccCCC--
Confidence 345666655432 468999999999 999988765321 1111111 12 34444321111
Q ss_pred cccccccEEEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeeec-CCCC
Q 038188 177 QDAYEHAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQ-RPCI 255 (384)
Q Consensus 177 ~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~-~P~~ 255 (384)
.....+++|+..+++|+.+..++.. .....++.++|.+|.+.+.........+..||+.+.+|+.++ +|..
T Consensus 125 ---~~~~~~~~~d~~~~~W~~~~~~p~~-----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 196 (301)
T 2vpj_A 125 ---RRHTSMERYDPNIDQWSMLGDMQTA-----REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK 196 (301)
T ss_dssp ---CBCCEEEEEETTTTEEEEEEECSSC-----CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC
T ss_pred ---cccceEEEEcCCCCeEEECCCCCCC-----cccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc
Confidence 1146799999999999998654321 122356778999999987543334678999999999999883 4443
Q ss_pred CCCCceeEEEECCeEEEEEecCCC-CeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEeC------CeEE
Q 038188 256 PYTPFESLAPLNGSIALLHLDESN-QYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESIN------GKLL 326 (384)
Q Consensus 256 ~~~~~~~l~~~~G~L~l~~~~~~~-~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~------~~l~ 326 (384)
. ....++..+|+|+++...... ..-++|.++- ..|.++..+ |.+....... .-+++|++..+. ..+.
T Consensus 197 r--~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~ 272 (301)
T 2vpj_A 197 R--SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM-TTPRCYVGAT-VLRGRLYAIAGYDGNSLLSSIE 272 (301)
T ss_dssp C--BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC-SSCCBSCEEE-EETTEEEEECCBCSSSBEEEEE
T ss_pred c--ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC-CCcccceeEE-EECCEEEEEcCcCCCcccccEE
Confidence 2 334567789999998543211 1345666654 789987543 2221222222 337777666431 3589
Q ss_pred EEECCCCeEEEEee
Q 038188 327 LYDLVVQEMRDLGR 340 (384)
Q Consensus 327 ~yd~~t~~~~~v~~ 340 (384)
.||+++++|+.+..
T Consensus 273 ~yd~~~~~W~~~~~ 286 (301)
T 2vpj_A 273 CYDPIIDSWEVVTS 286 (301)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEcCCCCeEEEcCC
Confidence 99999999999865
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.20 E-value=7.1e-09 Score=93.71 Aligned_cols=207 Identities=10% Similarity=0.073 Sum_probs=130.3
Q ss_pred ccccceEEEeeC-------CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEeccccccc
Q 038188 107 GPYDGIFCLCDG-------GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDA 179 (384)
Q Consensus 107 ~s~~GLl~~~~~-------~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 179 (384)
...+|.|.+..+ +.++++||.|++|..+|+++..... .... .++ . +++.+......
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~--~~~----~-~iyv~GG~~~~----- 120 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-----LGAA--VLN----G-LLYAVGGFDGS----- 120 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-----CEEE--EET----T-EEEEEEEECSS-----
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-----eEEE--EEC----C-EEEEEcCCCCC-----
Confidence 344666655532 4689999999999999987653211 1111 111 2 34444332221
Q ss_pred ccccEEEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCC--CccEEEEEEcCCceeeee-cCCCCC
Q 038188 180 YEHAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDF--HSKLILLFRISDEEFQEI-QRPCIP 256 (384)
Q Consensus 180 ~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~--~~~~il~fD~~~~~~~~i-~~P~~~ 256 (384)
.....+++|+..+++|+.+..++.. .....++.++|.+|.+.+..... ....+..||+.+++|+.+ ++|...
T Consensus 121 ~~~~~~~~~d~~~~~W~~~~~~p~~-----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 195 (302)
T 2xn4_A 121 TGLSSVEAYNIKSNEWFHVAPMNTR-----RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR 195 (302)
T ss_dssp CEEEEEEEEETTTTEEEEECCCSSC-----CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC
T ss_pred ccCceEEEEeCCCCeEeecCCCCCc-----ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc
Confidence 1146799999999999998755322 12235677899999998653221 246789999999999988 444332
Q ss_pred CCCceeEEEECCeEEEEEecCC-CCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEe------CCeEEE
Q 038188 257 YTPFESLAPLNGSIALLHLDES-NQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESI------NGKLLL 327 (384)
Q Consensus 257 ~~~~~~l~~~~G~L~l~~~~~~-~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~ 327 (384)
....++..+|+|+++..... ...-++|.++- ..|.++..+. .+.....+ +.-+++|++..+ ...+..
T Consensus 196 --~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~ 271 (302)
T 2xn4_A 196 --SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN-MCRRNAGV-CAVNGLLYVVGGDDGSCNLASVEY 271 (302)
T ss_dssp --BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS-SCCBSCEE-EEETTEEEEECCBCSSSBCCCEEE
T ss_pred --ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC-CccccCeE-EEECCEEEEECCcCCCcccccEEE
Confidence 33456778999999854321 12335777765 7899875432 22122222 233777776643 235999
Q ss_pred EECCCCeEEEEe
Q 038188 328 YDLVVQEMRDLG 339 (384)
Q Consensus 328 yd~~t~~~~~v~ 339 (384)
||+++++|+.+.
T Consensus 272 yd~~~~~W~~~~ 283 (302)
T 2xn4_A 272 YNPTTDKWTVVS 283 (302)
T ss_dssp EETTTTEEEECS
T ss_pred EcCCCCeEEECC
Confidence 999999999985
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.19 E-value=1.1e-08 Score=93.16 Aligned_cols=194 Identities=11% Similarity=0.070 Sum_probs=122.9
Q ss_pred EEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCccccccC
Q 038188 121 ITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRVSKG 200 (384)
Q Consensus 121 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~~ 200 (384)
++++||.|++|..+|+.|.... ..+.... +. +++.+...... .......+++|++.+++|+.+..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~--------~~~~~~~---~~-~iyv~GG~~~~---~~~~~~~~~~yd~~~~~W~~~~~ 144 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARC--------LFGLGEV---DD-KIYVVAGKDLQ---TEASLDSVLCYDPVAAKWSEVKN 144 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBC--------SCEEEEE---TT-EEEEEEEEBTT---TCCEEEEEEEEETTTTEEEEECC
T ss_pred EEEEeCCCCcEEECCCCCcccc--------ccceEEE---CC-EEEEEcCccCC---CCcccceEEEEeCCCCCEeECCC
Confidence 7899999999999988765321 1111111 12 34444332111 11125679999999999999875
Q ss_pred CccccceeecCCcceEEECceEEEEEeec-CCCCccEEEEEEcCCceeeeec-CCCCCCCCceeEEEECCeEEEEEec-C
Q 038188 201 NIKWIPYVFESYYNNANLNGVFYWFVSRA-GDFHSKLILLFRISDEEFQEIQ-RPCIPYTPFESLAPLNGSIALLHLD-E 277 (384)
Q Consensus 201 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~~~~~~~il~fD~~~~~~~~i~-~P~~~~~~~~~l~~~~G~L~l~~~~-~ 277 (384)
++.. . ....++.++|.+|.+.+.. .......+..||+.+++|+.++ +|... .....+..+|+|+++.-. .
T Consensus 145 ~p~~--r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~ 217 (318)
T 2woz_A 145 LPIK--V---YGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR--SMFGVAIHKGKIVIAGGVTE 217 (318)
T ss_dssp CSSC--E---ESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEEEEEET
T ss_pred CCCc--c---cccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc--ccceEEEECCEEEEEcCcCC
Confidence 5322 1 1235677999999998642 1223567999999999999884 44332 233567789999999542 2
Q ss_pred CCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEe---------------CCeEEEEECCCCeEEEE
Q 038188 278 SNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESI---------------NGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 278 ~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~---------------~~~l~~yd~~t~~~~~v 338 (384)
....-++|+++- ..|.++..+ |.+...+.+. .-+++|++..+ ...+..||+++++|+++
T Consensus 218 ~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 218 DGLSASVEAFDLKTNKWEVMTEF-PQERSSISLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp TEEEEEEEEEETTTCCEEECCCC-SSCCBSCEEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCccceEEEEECCCCeEEECCCC-CCcccceEEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 122346777765 789996543 2221222222 33677766532 23589999999999998
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.16 E-value=1.5e-08 Score=91.46 Aligned_cols=220 Identities=11% Similarity=0.100 Sum_probs=135.2
Q ss_pred CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCc---c
Q 038188 119 GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDS---W 195 (384)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~---W 195 (384)
+.++++||.|++|..+|+.|..... ... ...+ . +++.+....+ ......+++|+..+++ |
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~--~~~~----~-~l~v~GG~~~-----~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRY-----VAS--VSLH----D-RIYVIGGYDG-----RSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBS-----CEE--EEET----T-EEEEECCBCS-----SCBCCCEEEEETTCCTTCCC
T ss_pred eEEEEEcCCCCeEEeCCCCChhhcc-----ccE--EEEC----C-EEEEEcCCCC-----CccCceEEEEECCCCCCCee
Confidence 4789999999999999876643110 111 1111 2 3444432111 1125679999999999 9
Q ss_pred ccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeee-cCCCCCCCCceeEEEECCeEEEEE
Q 038188 196 RVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEI-QRPCIPYTPFESLAPLNGSIALLH 274 (384)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~G~L~l~~ 274 (384)
+.+..++.. .....++.++|.+|.+.+.........+..||+.+.+|+.+ ++|... .....+..+|+|+++.
T Consensus 94 ~~~~~~p~~-----r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~G 166 (301)
T 2vpj_A 94 YSVAPMNVR-----RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR--EGAGLVVASGVIYCLG 166 (301)
T ss_dssp EEECCCSSC-----CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC--BSCEEEEETTEEEEEC
T ss_pred EECCCCCCC-----ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc--ccceEEEECCEEEEEC
Confidence 998655322 12235677899999998754333356899999999999987 445432 3335566799999984
Q ss_pred ecC-CCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEe------CCeEEEEECCCCeEEEEeeccCCC
Q 038188 275 LDE-SNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESI------NGKLLLYDLVVQEMRDLGRFSSGE 345 (384)
Q Consensus 275 ~~~-~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v~~~~~~~ 345 (384)
... ....-++|+++- ..|.++..+ |.+.. ..-.+.-+++|++..+ ...+..||+++++|+.+......-
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 244 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPM-ATKRS-GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR 244 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCC-SSCCB-SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCC
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCC-Ccccc-cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcc
Confidence 322 112345677764 889987433 22212 2222333777776643 245999999999999987533221
Q ss_pred CcceEEEEEEeccceeCCCCC
Q 038188 346 LGAAILIYCYKESLIRLKGEE 366 (384)
Q Consensus 346 ~~~~~~~~~y~~sL~~~~~~~ 366 (384)
.....+.+-..+.-+.+..
T Consensus 245 --~~~~~~~~~~~i~v~GG~~ 263 (301)
T 2vpj_A 245 --CYVGATVLRGRLYAIAGYD 263 (301)
T ss_dssp --BSCEEEEETTEEEEECCBC
T ss_pred --cceeEEEECCEEEEEcCcC
Confidence 2333445555555555433
No 8
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.14 E-value=2.9e-11 Score=79.09 Aligned_cols=45 Identities=29% Similarity=0.515 Sum_probs=39.1
Q ss_pred cccccCCCCHHHHHHHHccCChhhhhhhhcccHhhHhhcCChHhH
Q 038188 7 DIASSMLMPEDVRLEILSRLPVKSLMRLRCVCKSWYALIENPKFI 51 (384)
Q Consensus 7 ~~~~~~~LP~dll~eIl~rLp~~~l~r~r~VcK~W~~li~~p~F~ 51 (384)
....+..||+|++.+||++||++++.++++|||+|+.++.++.|-
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 345678999999999999999999999999999999999998763
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.12 E-value=1.1e-08 Score=92.72 Aligned_cols=224 Identities=12% Similarity=0.084 Sum_probs=134.0
Q ss_pred CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCccccc
Q 038188 119 GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRVS 198 (384)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 198 (384)
+.++++||.|++|..+++.|.... ....... +. +++.+....... ........+++|+..+++|+.+
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~--------~~~~~~~---~~-~lyv~GG~~~~~-~~~~~~~~~~~~d~~~~~W~~~ 105 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRS--------GLAGCVV---GG-LLYAVGGRNNSP-DGNTDSSALDCYNPMTNQWSPC 105 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCB--------SCEEEEE---TT-EEEEECCEEEET-TEEEECCCEEEEETTTTEEEEC
T ss_pred ceEEEEcCCCCeEeECCCCCcccc--------cceEEEE---CC-EEEEECCCcCCC-CCCeecceEEEECCCCCeEeEC
Confidence 478999999999999987665321 1111111 12 333332211000 0011146789999999999998
Q ss_pred cCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeee-cCCCCCCCCceeEEEECCeEEEEEecC
Q 038188 199 KGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEI-QRPCIPYTPFESLAPLNGSIALLHLDE 277 (384)
Q Consensus 199 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~G~L~l~~~~~ 277 (384)
..++.. ......+.++|.+|.+...........+..||+.+.+|+.+ ++|... .....+..+|+|+++....
T Consensus 106 ~~~p~~-----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~ 178 (308)
T 1zgk_A 106 APMSVP-----RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRR--IGVGVAVLNRLLYAVGGFD 178 (308)
T ss_dssp CCCSSC-----CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEECCBC
T ss_pred CCCCcC-----ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccc--cceEEEEECCEEEEEeCCC
Confidence 755322 12235677899999998654333356789999999999987 445433 2334566799999984322
Q ss_pred -CCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEe------CCeEEEEECCCCeEEEEeeccCCCCcc
Q 038188 278 -SNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESI------NGKLLLYDLVVQEMRDLGRFSSGELGA 348 (384)
Q Consensus 278 -~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v~~~~~~~~~~ 348 (384)
....-++|.++- ..|.++..+ |.+....... .-+++|++..+ ...+..||+++++|+.+......- .
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r--~ 254 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAM-NTIRSGAGVC-VLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR--S 254 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCC-SSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC--B
T ss_pred CCCcCceEEEEeCCCCeEeeCCCC-CCccccceEE-EECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc--c
Confidence 112335666654 889986543 2221222222 33777776643 245999999999999987533221 2
Q ss_pred eEEEEEEeccceeCCCCC
Q 038188 349 AILIYCYKESLIRLKGEE 366 (384)
Q Consensus 349 ~~~~~~y~~sL~~~~~~~ 366 (384)
....+.+-..+.-+.+.+
T Consensus 255 ~~~~~~~~~~i~v~GG~~ 272 (308)
T 1zgk_A 255 ALGITVHQGRIYVLGGYD 272 (308)
T ss_dssp SCEEEEETTEEEEECCBC
T ss_pred ceEEEEECCEEEEEcCcC
Confidence 333445555565555533
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.12 E-value=2.6e-08 Score=89.97 Aligned_cols=220 Identities=11% Similarity=0.086 Sum_probs=134.7
Q ss_pred CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCccccc
Q 038188 119 GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRVS 198 (384)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 198 (384)
+.++++||.+++|..+++.|.... ..+.... +. +++.+...... .....+++|+..+++|+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~--------~~~~~~~---~~-~lyv~GG~~~~-----~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRC--------RAGMVYM---AG-LVFAVGGFNGS-----LRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCB--------SCEEEEE---TT-EEEEESCBCSS-----SBCCCEEEEETTTTEEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccc--------cceEEEE---CC-EEEEEeCcCCC-----ccccceEEECCCCCceeeC
Confidence 468899999999999987664321 1111111 11 34443221111 1246789999999999998
Q ss_pred cCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeee-cCCCCCCCCceeEEEECCeEEEEEecC
Q 038188 199 KGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEI-QRPCIPYTPFESLAPLNGSIALLHLDE 277 (384)
Q Consensus 199 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~G~L~l~~~~~ 277 (384)
..++.. .....++.++|.+|.+.+.........+..||+.+.+|+.+ ++|... .....+..+|+|+++....
T Consensus 93 ~~~p~~-----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~ 165 (302)
T 2xn4_A 93 ANMRDR-----RSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR--SSVGVGVVGGLLYAVGGYD 165 (302)
T ss_dssp CCCSSC-----CBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECCEE
T ss_pred CCCCcc-----ccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc--cCceEEEECCEEEEEeCCC
Confidence 765322 12235677899999998764333456789999999999998 344332 3345667899999984321
Q ss_pred CCC---eEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEe------CCeEEEEECCCCeEEEEeeccCCCC
Q 038188 278 SNQ---YIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESI------NGKLLLYDLVVQEMRDLGRFSSGEL 346 (384)
Q Consensus 278 ~~~---~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v~~~~~~~~ 346 (384)
... .-++|.++- ..|.++..+ |.+...+.. +.-+++|++..+ ...+..||+++++|+.+......-
T Consensus 166 ~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r- 242 (302)
T 2xn4_A 166 VASRQCLSTVECYNATTNEWTYIAEM-STRRSGAGV-GVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR- 242 (302)
T ss_dssp TTTTEECCCEEEEETTTTEEEEECCC-SSCCBSCEE-EEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC-
T ss_pred CCCCccccEEEEEeCCCCcEEECCCC-ccccccccE-EEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc-
Confidence 111 234666665 789997543 222122222 233777776643 235999999999999987543321
Q ss_pred cceEEEEEEeccceeCCCCC
Q 038188 347 GAAILIYCYKESLIRLKGEE 366 (384)
Q Consensus 347 ~~~~~~~~y~~sL~~~~~~~ 366 (384)
....++.+-..+.-+.+.+
T Consensus 243 -~~~~~~~~~~~i~v~GG~~ 261 (302)
T 2xn4_A 243 -RNAGVCAVNGLLYVVGGDD 261 (302)
T ss_dssp -BSCEEEEETTEEEEECCBC
T ss_pred -ccCeEEEECCEEEEECCcC
Confidence 2333455555666555543
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.11 E-value=2.5e-08 Score=90.24 Aligned_cols=220 Identities=11% Similarity=0.055 Sum_probs=134.8
Q ss_pred CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCcccc
Q 038188 118 GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRV 197 (384)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 197 (384)
.+.++++||.|++|..++++|..... .... .+ +. +++.+.... ......+++|+..+++|+.
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~--~~----~~-~lyv~GG~~------~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRD-----AACV--FW----DN-VVYILGGSQ------LFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBS-----CEEE--EE----TT-EEEEECCBS------SSBCCEEEEEETTTTEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccce-----eEEE--EE----CC-EEEEEeCCC------CCCcceEEEEeCCCCeEEE
Confidence 35789999999999999877653211 1111 11 12 243332211 1125789999999999998
Q ss_pred ccCCccccceeecCCcceEEECceEEEEEeec-CCCCccEEEEEEcCCceeeee-cCCCCCCCCceeEEEECCeEEEEEe
Q 038188 198 SKGNIKWIPYVFESYYNNANLNGVFYWFVSRA-GDFHSKLILLFRISDEEFQEI-QRPCIPYTPFESLAPLNGSIALLHL 275 (384)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~G~L~l~~~ 275 (384)
+..++.. .....++.++|.+|.+.+.. .......+..||+.+.+|+.+ ++|... .....+..+|+|+++..
T Consensus 85 ~~~~p~~-----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG 157 (306)
T 3ii7_A 85 KLGPPTP-----RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR--CSHGMVEANGLIYVCGG 157 (306)
T ss_dssp EECCSSC-----CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECC
T ss_pred CCCCCcc-----ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc--ceeEEEEECCEEEEECC
Confidence 8655322 12235678899999998753 233457799999999999987 445432 33355678999999843
Q ss_pred -cCCCC----eEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEe------CCeEEEEECCCCeEEEEeecc
Q 038188 276 -DESNQ----YIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESI------NGKLLLYDLVVQEMRDLGRFS 342 (384)
Q Consensus 276 -~~~~~----~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~v~~~~ 342 (384)
..... .-++|.++- ..|.++..+ |.+ ....-.+.-+++|++..+ ...+..||+++++|+.+....
T Consensus 158 ~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 235 (306)
T 3ii7_A 158 SLGNNVSGRVLNSCEVYDPATETWTELCPM-IEA-RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMP 235 (306)
T ss_dssp EESCTTTCEECCCEEEEETTTTEEEEECCC-SSC-CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCS
T ss_pred CCCCCCcccccceEEEeCCCCCeEEECCCc-cch-hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCC
Confidence 21111 345777765 889987543 222 122222333777766632 245999999999999986533
Q ss_pred CCCCcceEEEEEEeccceeCCCCC
Q 038188 343 SGELGAAILIYCYKESLIRLKGEE 366 (384)
Q Consensus 343 ~~~~~~~~~~~~y~~sL~~~~~~~ 366 (384)
..- .....+.+-..+.-+.+..
T Consensus 236 ~~r--~~~~~~~~~~~i~v~GG~~ 257 (306)
T 3ii7_A 236 WKG--VTVKCAAVGSIVYVLAGFQ 257 (306)
T ss_dssp CCB--SCCEEEEETTEEEEEECBC
T ss_pred CCc--cceeEEEECCEEEEEeCcC
Confidence 221 2233444555555555543
No 12
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.09 E-value=5.9e-11 Score=105.29 Aligned_cols=50 Identities=24% Similarity=0.436 Sum_probs=46.7
Q ss_pred cccCCCCHHHHHHHHccCChhhhh-hhhcccHhhHhhcCChHhHHHHhhcc
Q 038188 9 ASSMLMPEDVRLEILSRLPVKSLM-RLRCVCKSWYALIENPKFISKHLENF 58 (384)
Q Consensus 9 ~~~~~LP~dll~eIl~rLp~~~l~-r~r~VcK~W~~li~~p~F~~~~~~~~ 58 (384)
+....||+||+.+||+|||+++|+ ||++|||+|+++|++|.|.+.+..+.
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 456799999999999999999999 99999999999999999999988765
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.05 E-value=1.6e-08 Score=93.66 Aligned_cols=242 Identities=14% Similarity=0.102 Sum_probs=136.6
Q ss_pred ccccceEEEee---CCeEEEEccC--cccccccCCCC-CCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccc
Q 038188 107 GPYDGIFCLCD---GGLITLWNPA--TKECRTLPNYK-KNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAY 180 (384)
Q Consensus 107 ~s~~GLl~~~~---~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 180 (384)
+..+|.|.+.. .+.++++||. +++|..+|+.| ..+.. .... .++ . +++.+............
T Consensus 16 ~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~-----~~~~--~~~----~-~lyv~GG~~~~~~~~~~ 83 (357)
T 2uvk_A 16 AIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQ-----ATSA--FID----G-NLYVFGGIGKNSEGLTQ 83 (357)
T ss_dssp EEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBS-----CEEE--EET----T-EEEEECCEEECTTSCEE
T ss_pred EEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCcc-----ceEE--EEC----C-EEEEEcCCCCCCCccce
Confidence 34477766654 3589999998 59999998876 32110 1111 111 1 34444322010000111
Q ss_pred cccEEEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCC-----------------------------
Q 038188 181 EHAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGD----------------------------- 231 (384)
Q Consensus 181 ~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~----------------------------- 231 (384)
....+++|+..+++|+.+..++ |. ......++..+|.+|.+......
T Consensus 84 ~~~~v~~yd~~~~~W~~~~~~~---p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (357)
T 2uvk_A 84 VFNDVHKYNPKTNSWVKLMSHA---PM-GMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDK 159 (357)
T ss_dssp ECCCEEEEETTTTEEEECSCCC---SS-CCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred eeccEEEEeCCCCcEEECCCCC---Cc-ccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccc
Confidence 2467999999999999987653 11 11223456799999999864211
Q ss_pred -----CCccEEEEEEcCCceeeee-cCCCCCCCCceeEEEECCeEEEEEe--cCCCCeEEEEEEc---C-CceeEEEEeC
Q 038188 232 -----FHSKLILLFRISDEEFQEI-QRPCIPYTPFESLAPLNGSIALLHL--DESNQYIEIWVMN---E-MNWIQQFAIG 299 (384)
Q Consensus 232 -----~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~G~L~l~~~--~~~~~~l~iW~l~---~-~~W~~~~~i~ 299 (384)
.....+..||+.+.+|+.+ ++|... .....++..+|+|+++.- ......-++|.++ + ..|.++..+.
T Consensus 160 ~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~ 238 (357)
T 2uvk_A 160 KAEDYFFNKFLLSFDPSTQQWSYAGESPWYG-TAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVS 238 (357)
T ss_dssp CGGGGCCCCEEEEEETTTTEEEEEEECSSCC-CBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSS
T ss_pred cccccCCcccEEEEeCCCCcEEECCCCCCCC-cccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCC
Confidence 0136899999999999987 455432 222466778999999832 1111233566664 2 7899865442
Q ss_pred CCCccccceEEEeCCEEEEEEeC-----------------------CeEEEEECCCCeEEEEeeccCCCCcceEEEEEEe
Q 038188 300 PFLGVKSPCGFWKNNAVLMESIN-----------------------GKLLLYDLVVQEMRDLGRFSSGELGAAILIYCYK 356 (384)
Q Consensus 300 ~~~~~~~~~~~~~~~~il~~~~~-----------------------~~l~~yd~~t~~~~~v~~~~~~~~~~~~~~~~y~ 356 (384)
..........+.-+++|++..+. ..+..||+++++|+.+.....+- .....+.+-
T Consensus 239 ~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~ 316 (357)
T 2uvk_A 239 SPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR--AYGVSLPWN 316 (357)
T ss_dssp TTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCC--BSSEEEEET
T ss_pred CCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCc--ccceeEEeC
Confidence 11111122233347787766431 24789999999999987643331 222344455
Q ss_pred ccceeCCCCCc
Q 038188 357 ESLIRLKGEEE 367 (384)
Q Consensus 357 ~sL~~~~~~~~ 367 (384)
..+.-+.+..+
T Consensus 317 ~~i~v~GG~~~ 327 (357)
T 2uvk_A 317 NSLLIIGGETA 327 (357)
T ss_dssp TEEEEEEEECG
T ss_pred CEEEEEeeeCC
Confidence 55655555443
No 14
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.03 E-value=5.9e-08 Score=88.25 Aligned_cols=231 Identities=9% Similarity=0.127 Sum_probs=133.0
Q ss_pred eEEEeeCCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecc-cccccccccEEEEEEc
Q 038188 112 IFCLCDGGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNE-KIQDAYEHAHVAVYTS 190 (384)
Q Consensus 112 Ll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~-~~~~~~~~~~~~vyss 190 (384)
++++..++.++++||.|++|.. ++.+...++ ...... ...+ +++.+...... ..........+++|+.
T Consensus 6 ~l~~~GG~~~~~yd~~~~~W~~-~~~~~p~~r------~~~~~~--~~~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~ 74 (315)
T 4asc_A 6 LIFMISEEGAVAYDPAANECYC-ASLSSQVPK------NHVSLV--TKEN--QVFVAGGLFYNEDNKEDPMSAYFLQFDH 74 (315)
T ss_dssp EEEEEETTEEEEEETTTTEEEE-EECCCCSCS------SEEEEE--CTTC--CEEEEEEEEECSSCSSSCEEEEEEEEET
T ss_pred EEEEEcCCceEEECCCCCeEec-CCCCCCCCc------cceEEE--EECC--EEEEEcCcccCCCCCccccccceEEecC
Confidence 3444456889999999999986 333221111 111111 1122 23333221110 1000111344899999
Q ss_pred CCCccccccCCccccceeecCCcceEEECceEEEEEeec---CCCCccEEEEEEcCCceeeee-cCCCCCCCCceeEEEE
Q 038188 191 STDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRA---GDFHSKLILLFRISDEEFQEI-QRPCIPYTPFESLAPL 266 (384)
Q Consensus 191 ~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~---~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~ 266 (384)
.+++|+.+..++.. . .....+.++|.+|.+.+.. .......+..||+.+.+|+.+ ++|... .....+..
T Consensus 75 ~~~~W~~~~~~p~~--r---~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~ 147 (315)
T 4asc_A 75 LDSEWLGMPPLPSP--R---CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV--YGHTVLSH 147 (315)
T ss_dssp TTTEEEECCCBSSC--E---ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEE
T ss_pred CCCeEEECCCCCcc--h---hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc--cceeEEEE
Confidence 99999988655321 1 1235678899999998753 134457799999999999987 445433 33455678
Q ss_pred CCeEEEEEec--CCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEe-C-----CeEEEEECCCCeEE
Q 038188 267 NGSIALLHLD--ESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESI-N-----GKLLLYDLVVQEMR 336 (384)
Q Consensus 267 ~G~L~l~~~~--~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~-~-----~~l~~yd~~t~~~~ 336 (384)
+|+|+++... .....-++|.++- .+|.++..+ |.+...+.. +.-+++|++..+ . ..+..||+++++|+
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM-QTARSLFGA-TVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC-SSCCBSCEE-EEETTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC-CCchhceEE-EEECCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 9999998543 2222346777765 789986543 222122222 233677766543 1 25899999999999
Q ss_pred EEeeccCCCCcceEEEEEEeccceeCCC
Q 038188 337 DLGRFSSGELGAAILIYCYKESLIRLKG 364 (384)
Q Consensus 337 ~v~~~~~~~~~~~~~~~~y~~sL~~~~~ 364 (384)
.+.....+- .....+.+-..|.-+.+
T Consensus 226 ~~~~~p~~r--~~~~~~~~~~~l~v~GG 251 (315)
T 4asc_A 226 PFEAFPQER--SSLSLVSLVGTLYAIGG 251 (315)
T ss_dssp EECCCSSCC--BSCEEEEETTEEEEEEE
T ss_pred ECCCCCCcc--cceeEEEECCEEEEECC
Confidence 987533221 22234444444544443
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.95 E-value=1.4e-07 Score=85.89 Aligned_cols=234 Identities=12% Similarity=0.182 Sum_probs=134.3
Q ss_pred cceEEEeeCCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEe-cccccccccccEEEEE
Q 038188 110 DGIFCLCDGGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLW-NEKIQDAYEHAHVAVY 188 (384)
Q Consensus 110 ~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~-~~~~~~~~~~~~~~vy 188 (384)
++.|++..+....++||.|++|...|.+ ...++ ...... ... . +++.+.... ............+++|
T Consensus 15 ~~~i~~~GG~~~~~yd~~~~~W~~~~~~-~~~~r------~~~~~~--~~~-~-~lyv~GG~~~~~~~~~~~~~~~~~~~ 83 (318)
T 2woz_A 15 KDLILLVNDTAAVAYDPMENECYLTALA-EQIPR------NHSSIV--TQQ-N-QVYVVGGLYVDEENKDQPLQSYFFQL 83 (318)
T ss_dssp EEEEEEECSSEEEEEETTTTEEEEEEEC-TTSCS------SEEEEE--CSS-S-CEEEEESSCC-------CCCBEEEEE
T ss_pred cchhhhccccceEEECCCCCceecccCC-ccCCc------cceEEE--EEC-C-EEEEECCcccCccccCCCccccEEEE
Confidence 4566666667789999999999884322 11111 111111 111 1 233332110 0000000112348999
Q ss_pred EcCCCccccccCCccccceeecCCcceEEECceEEEEEeec--CCCCccEEEEEEcCCceeeee-cCCCCCCCCceeEEE
Q 038188 189 TSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRA--GDFHSKLILLFRISDEEFQEI-QRPCIPYTPFESLAP 265 (384)
Q Consensus 189 ss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~--~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~ 265 (384)
+..+++|+.+..++.. ......+.++|.+|.+.+.. .......+..||+.+.+|+.+ ++|... .....+.
T Consensus 84 d~~~~~W~~~~~~p~~-----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~ 156 (318)
T 2woz_A 84 DNVSSEWVGLPPLPSA-----RCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV--YGHNVIS 156 (318)
T ss_dssp ETTTTEEEECSCBSSC-----BCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE--ESCEEEE
T ss_pred eCCCCcEEECCCCCcc-----ccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc--cccEEEE
Confidence 9999999988655322 12235677899999998753 223356799999999999988 455433 2234556
Q ss_pred ECCeEEEEEe--cCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEe------CCeEEEEECCCCeE
Q 038188 266 LNGSIALLHL--DESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESI------NGKLLLYDLVVQEM 335 (384)
Q Consensus 266 ~~G~L~l~~~--~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~t~~~ 335 (384)
.+|+|+++.. ......-++|+++- .+|.++..+ |.+...+... .-+++|++..+ ...+..||+++++|
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM-KTPRSMFGVA-IHKGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC-SSCCBSCEEE-EETTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC-CCCcccceEE-EECCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 8999999843 22112335777765 789987543 2221222222 33677766543 13588999999999
Q ss_pred EEEeeccCCCCcceEEEEEEeccceeCCCC
Q 038188 336 RDLGRFSSGELGAAILIYCYKESLIRLKGE 365 (384)
Q Consensus 336 ~~v~~~~~~~~~~~~~~~~y~~sL~~~~~~ 365 (384)
+.+.....+- .....+.+-..|.-+.+.
T Consensus 235 ~~~~~~p~~r--~~~~~~~~~~~i~v~GG~ 262 (318)
T 2woz_A 235 EVMTEFPQER--SSISLVSLAGSLYAIGGF 262 (318)
T ss_dssp EECCCCSSCC--BSCEEEEETTEEEEECCB
T ss_pred EECCCCCCcc--cceEEEEECCEEEEECCe
Confidence 9986533221 223345555566655543
No 16
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.78 E-value=1.4e-05 Score=76.09 Aligned_cols=43 Identities=16% Similarity=0.369 Sum_probs=38.2
Q ss_pred ccCCCCHHHHHHHHccCChhhhhhhhcccHhhHhhcCC-hHhHH
Q 038188 10 SSMLMPEDVRLEILSRLPVKSLMRLRCVCKSWYALIEN-PKFIS 52 (384)
Q Consensus 10 ~~~~LP~dll~eIl~rLp~~~l~r~r~VcK~W~~li~~-p~F~~ 52 (384)
....||+|++.+||++||+++|.++..|||+|+.++.+ +..-+
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~ 57 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWK 57 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHH
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 35679999999999999999999999999999999998 65433
No 17
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.78 E-value=2.2e-05 Score=74.49 Aligned_cols=282 Identities=12% Similarity=0.116 Sum_probs=141.2
Q ss_pred cccCCCCHHHHHHHHccCChhhhhhhhcccHhhHhhcCChHhHHHHhhccCCCCceEEEEeeeecCC-CCCceeE-ecc-
Q 038188 9 ASSMLMPEDVRLEILSRLPVKSLMRLRCVCKSWYALIENPKFISKHLENFNDENAHLMISYQVYDDN-GPNSVTS-LFK- 85 (384)
Q Consensus 9 ~~~~~LP~dll~eIl~rLp~~~l~r~r~VcK~W~~li~~p~F~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~- 85 (384)
.....||+|++.+||++|++++|.++.+|||+|+.++.++.+-+....+.....+...-........ .....-. +..
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~~ 96 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQ 96 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHHH
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhhh
Confidence 4467899999999999999999999999999999999999776665443221111100000000000 0000000 000
Q ss_pred ---CCCc--cCCCCCC-C--CccccceeeccccceEEEee-CCeEEEEccCcccccc-cCCCCCCCCcccccceeeeEEe
Q 038188 86 ---DKTL--ADLSYEN-I--HRPISRELLGPYDGIFCLCD-GGLITLWNPATKECRT-LPNYKKNLPALATFLKRNAIFG 155 (384)
Q Consensus 86 ---~~~~--~~~~~~~-~--~~~~~~~~~~s~~GLl~~~~-~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g 155 (384)
...+ ....... + +.......+...+.+++... ++.+.|||..|++... ++... .....+.
T Consensus 97 ~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~----------~~v~~~~ 166 (445)
T 2ovr_B 97 HRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT----------GGVWSSQ 166 (445)
T ss_dssp HHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCS----------SCEEEEE
T ss_pred hhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCC----------CCEEEEE
Confidence 0000 0000000 0 00001122333444444443 5689999999887653 22111 1122333
Q ss_pred eeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCcc
Q 038188 156 LCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSK 235 (384)
Q Consensus 156 ~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~ 235 (384)
+++ .+ +... .. .-.+.+|+..++.-... . .. ....-.++..+|.....+ ...+
T Consensus 167 ~~~---~~--l~s~---~~-------dg~i~vwd~~~~~~~~~--~----~~-h~~~v~~~~~~~~~l~s~-----s~dg 219 (445)
T 2ovr_B 167 MRD---NI--IISG---ST-------DRTLKVWNAETGECIHT--L----YG-HTSTVRCMHLHEKRVVSG-----SRDA 219 (445)
T ss_dssp EET---TE--EEEE---ET-------TSCEEEEETTTTEEEEE--E----CC-CSSCEEEEEEETTEEEEE-----ETTS
T ss_pred ecC---CE--EEEE---eC-------CCeEEEEECCcCcEEEE--E----CC-CCCcEEEEEecCCEEEEE-----eCCC
Confidence 332 22 1111 11 45678888877632211 0 00 000112344455543333 3367
Q ss_pred EEEEEEcCCceee-eecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCC
Q 038188 236 LILLFRISDEEFQ-EIQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNN 314 (384)
Q Consensus 236 ~il~fD~~~~~~~-~i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~ 314 (384)
.|..+|+.+.+.. .+... ......+..+|...++...+ ..+.+|-++.. ..+..+........-+.+ .+.
T Consensus 220 ~i~~wd~~~~~~~~~~~~~----~~~v~~~~~~~~~l~~~~~d--g~i~iwd~~~~--~~~~~~~~~~~~v~~~~~-~~~ 290 (445)
T 2ovr_B 220 TLRVWDIETGQCLHVLMGH----VAAVRCVQYDGRRVVSGAYD--FMVKVWDPETE--TCLHTLQGHTNRVYSLQF-DGI 290 (445)
T ss_dssp EEEEEESSSCCEEEEEECC----SSCEEEEEECSSCEEEEETT--SCEEEEEGGGT--EEEEEECCCSSCEEEEEE-CSS
T ss_pred EEEEEECCCCcEEEEEcCC----cccEEEEEECCCEEEEEcCC--CEEEEEECCCC--cEeEEecCCCCceEEEEE-CCC
Confidence 8888998766543 23222 12223334477766666555 78999987652 334444332211112222 344
Q ss_pred EEEEEEeCCeEEEEECCCCeEE
Q 038188 315 AVLMESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 315 ~il~~~~~~~l~~yd~~t~~~~ 336 (384)
.++....++.+.+||+++++..
T Consensus 291 ~l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 291 HVVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEeCCCeEEEEECCCCCEE
Confidence 5555666788999999987753
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.74 E-value=1.8e-06 Score=79.78 Aligned_cols=151 Identities=8% Similarity=-0.010 Sum_probs=91.0
Q ss_pred cEEEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecC-CCCccEEEEEEc--CCceeeee-cCCCCCCC
Q 038188 183 AHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAG-DFHSKLILLFRI--SDEEFQEI-QRPCIPYT 258 (384)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~-~~~~~~il~fD~--~~~~~~~i-~~P~~~~~ 258 (384)
..+++|+..+++|+.+..++.. .......+.++|.+|.+.+... ......+..||+ .+.+|+.+ ++|.....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~----~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~ 243 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWY----GTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV 243 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSC----CCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC
T ss_pred ccEEEEeCCCCcEEECCCCCCC----CcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc
Confidence 6899999999999998654211 1122356788999999976421 122456777876 89999987 34433222
Q ss_pred CceeEEEECCeEEEEEecC------------------CCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEE
Q 038188 259 PFESLAPLNGSIALLHLDE------------------SNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLM 318 (384)
Q Consensus 259 ~~~~l~~~~G~L~l~~~~~------------------~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~ 318 (384)
.....+..+|+|+++.-.. .....++|+++- .+|.++..++ .+... ..++.-+++|++
T Consensus 244 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~-~~~~~~~~~i~v 321 (357)
T 2uvk_A 244 AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELS-QGRAY-GVSLPWNNSLLI 321 (357)
T ss_dssp BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECS-SCCBS-SEEEEETTEEEE
T ss_pred ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCC-CCccc-ceeEEeCCEEEE
Confidence 2335778899999984311 111245666654 8899986653 22122 223334777766
Q ss_pred EEe-C------CeEEEEECCCCeEEEEe
Q 038188 319 ESI-N------GKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 319 ~~~-~------~~l~~yd~~t~~~~~v~ 339 (384)
..+ + ..+..++++++++.+..
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 533 1 24888999999987653
No 19
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.74 E-value=1e-06 Score=89.01 Aligned_cols=213 Identities=10% Similarity=0.064 Sum_probs=122.4
Q ss_pred ccceEEEeeC------CeEEEEccCcccccccC-CCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEeccccccccc
Q 038188 109 YDGIFCLCDG------GLITLWNPATKECRTLP-NYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYE 181 (384)
Q Consensus 109 ~~GLl~~~~~------~~~~V~NP~T~~~~~LP-~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 181 (384)
.+|.|.+..+ +.++++||.|++|..++ +.+....+.. ........... +. +++.+...... ...
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~---R~~hs~~~~~~-~~-~lyv~GG~~~~----~~~ 466 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVA---RMCHTFTTISR-NN-QLLLIGGRKAP----HQG 466 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCC---CBSCEEEEETT-TT-EEEEECCBSST----TCB
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCcc---ccceEEEEEcc-CC-EEEEEcCCCCC----CCc
Confidence 4566555543 46899999999999988 5221100000 01111111100 12 24444321111 111
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEEE-CceEEEEEeecCCCCccEEEEEEcCCceeeeec----CCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL-NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQ----RPCIP 256 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~----~P~~~ 256 (384)
...+++|+..+++|+.+..++.. .....++.+ +|.+|.+.+.... . .+..||+.+.+|+.++ +|...
T Consensus 467 ~~dv~~yd~~t~~W~~~~~~p~~-----R~~h~~~~~~~~~iyv~GG~~~~--~-~v~~yd~~t~~W~~~~~~g~~p~~r 538 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIKSLSHT-----RFRHSACSLPDGNVLILGGVTEG--P-AMLLYNVTEEIFKDVTPKDEFFQNS 538 (695)
T ss_dssp CCCCEEEETTTTEEEECCCCSBC-----CBSCEEEECTTSCEEEECCBCSS--C-SEEEEETTTTEEEECCCSSGGGGSC
T ss_pred cccEEEEeCCCCcEEECCCCCCC-----cccceEEEEcCCEEEEECCCCCC--C-CEEEEECCCCceEEccCCCCCCCcc
Confidence 45699999999999998755322 122345554 9999999875321 1 7999999999999886 44433
Q ss_pred CCCceeEEEEC---CeEEEEEecCC---CCeEEEEEEc--CCc------eeEEEEeCCCCccccceEEEeCCEEEEEEe-
Q 038188 257 YTPFESLAPLN---GSIALLHLDES---NQYIEIWVMN--EMN------WIQQFAIGPFLGVKSPCGFWKNNAVLMESI- 321 (384)
Q Consensus 257 ~~~~~~l~~~~---G~L~l~~~~~~---~~~l~iW~l~--~~~------W~~~~~i~~~~~~~~~~~~~~~~~il~~~~- 321 (384)
... ..+.++ |+|+++..... ...-++|.++ ... |.++...++.+...+...+.++++|++..+
T Consensus 539 ~~~--~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 539 LVS--AGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp CBS--CEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCB
T ss_pred cce--eEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCc
Confidence 222 223334 88999854311 1123455554 456 888766433333334444555478877643
Q ss_pred --------CCeEEEEECCCCeEEEEee
Q 038188 322 --------NGKLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 322 --------~~~l~~yd~~t~~~~~v~~ 340 (384)
...+..||+++++|+.+..
T Consensus 617 ~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 617 SPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp CSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred cCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 2359999999999996554
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.56 E-value=1.7e-05 Score=75.13 Aligned_cols=46 Identities=30% Similarity=0.460 Sum_probs=39.9
Q ss_pred cccCCCCHH----HHHHHHccCChhhhhhhhcccHhhHhhcCChHhHHHH
Q 038188 9 ASSMLMPED----VRLEILSRLPVKSLMRLRCVCKSWYALIENPKFISKH 54 (384)
Q Consensus 9 ~~~~~LP~d----ll~eIl~rLp~~~l~r~r~VcK~W~~li~~p~F~~~~ 54 (384)
.....||+| |+.+||++|++++|.++.+|||+|+.++.++.+-+..
T Consensus 9 d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~ 58 (435)
T 1p22_A 9 DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKL 58 (435)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHH
T ss_pred ChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHH
Confidence 445679999 9999999999999999999999999999987654443
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.10 E-value=1.2e-06 Score=76.82 Aligned_cols=51 Identities=25% Similarity=0.303 Sum_probs=45.8
Q ss_pred cccCCCCHHHHHHHHccCChhhhhhhhcccHhhHhhcCChHhHHHHhhccC
Q 038188 9 ASSMLMPEDVRLEILSRLPVKSLMRLRCVCKSWYALIENPKFISKHLENFN 59 (384)
Q Consensus 9 ~~~~~LP~dll~eIl~rLp~~~l~r~r~VcK~W~~li~~p~F~~~~~~~~~ 59 (384)
..+..||+|++..||+.|++++|+++.+|||+||.+++++.--+.++.+..
T Consensus 3 ~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 3 STLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp CHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred chhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 346789999999999999999999999999999999999988877777654
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.04 E-value=5.7e-05 Score=75.75 Aligned_cols=195 Identities=11% Similarity=0.099 Sum_probs=111.3
Q ss_pred eEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCcccccc
Q 038188 120 LITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRVSK 199 (384)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 199 (384)
.+.++||.|++|..++.++.... ....+..... +=+++.+. +.. ...+++|+..+++|+.+.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~------~~~~~~~~~~---~g~lyv~G---G~~------~~~v~~yd~~t~~W~~~~ 281 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHD------MFCPGISMDG---NGQIVVTG---GND------AKKTSLYDSSSDSWIPGP 281 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCC------CSSCEEEECT---TSCEEEEC---SSS------TTCEEEEEGGGTEEEECC
T ss_pred EEEEEeCCCCcEEeCcccCCCCC------CccccccCCC---CCCEEEeC---CCC------CCceEEecCcCCceeECC
Confidence 57899999999999876653211 1111111111 11344432 211 347999999999999886
Q ss_pred CCccccceeecCCcceEEE-CceEEEEEee-cCCCCccEEEEEEcCCceeeeec----CCCCCCCCceeEEEECCeEEEE
Q 038188 200 GNIKWIPYVFESYYNNANL-NGVFYWFVSR-AGDFHSKLILLFRISDEEFQEIQ----RPCIPYTPFESLAPLNGSIALL 273 (384)
Q Consensus 200 ~~~~~~~~~~~~~~~~v~~-~G~lywl~~~-~~~~~~~~il~fD~~~~~~~~i~----~P~~~~~~~~~l~~~~G~L~l~ 273 (384)
.++.. .....++.+ +|++|.+.+. ........+..||+.+++|+.++ .|... .....+...+++++++
T Consensus 282 ~~~~~-----R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~-~~~~~~~~~~~~iyv~ 355 (656)
T 1k3i_A 282 DMQVA-----RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLT-ADKQGLYRSDNHAWLF 355 (656)
T ss_dssp CCSSC-----CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCC-CCTTGGGTTTCSCCEE
T ss_pred CCCcc-----ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccc-ccccceeecCCceEEE
Confidence 55321 122345666 9999999873 22223467899999999999873 12111 1111333456666666
Q ss_pred EecC-------CCCeEEEEEEcCCceeEEEEeCCC------CccccceEE---EeCCEEEEEEeC---------C---eE
Q 038188 274 HLDE-------SNQYIEIWVMNEMNWIQQFAIGPF------LGVKSPCGF---WKNNAVLMESIN---------G---KL 325 (384)
Q Consensus 274 ~~~~-------~~~~l~iW~l~~~~W~~~~~i~~~------~~~~~~~~~---~~~~~il~~~~~---------~---~l 325 (384)
.... ....+..|-.+...|.......+. .... ..++ ..+++|++..+. . .+
T Consensus 356 Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~-~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v 434 (656)
T 1k3i_A 356 GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC-GNAVMYDAVKGKILTFGGSPDYQDSDATTNAHII 434 (656)
T ss_dssp ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT-CEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEE
T ss_pred ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC-CceEeccCCCCeEEEEeCCCCCCCCCcCCcceEE
Confidence 4221 124455555554677654332221 0011 1222 136788776441 1 58
Q ss_pred EEEECCCCeEEEEe
Q 038188 326 LLYDLVVQEMRDLG 339 (384)
Q Consensus 326 ~~yd~~t~~~~~v~ 339 (384)
..||+++++|..+.
T Consensus 435 ~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 435 TLGEPGTSPNTVFA 448 (656)
T ss_dssp ECCSTTSCCEEEEC
T ss_pred EcCCCCCCCeeEEc
Confidence 89999999999885
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.91 E-value=0.00023 Score=71.73 Aligned_cols=178 Identities=10% Similarity=0.015 Sum_probs=109.9
Q ss_pred ccEEEEEEcCCCcccccc-CCc-cccceeecCCcceEEE--CceEEEEEeecCCC-CccEEEEEEcCCceeeee-cCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSK-GNI-KWIPYVFESYYNNANL--NGVFYWFVSRAGDF-HSKLILLFRISDEEFQEI-QRPCI 255 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~-~~~-~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~-~~~~il~fD~~~~~~~~i-~~P~~ 255 (384)
...+++|+..+++|+.+. ..+ ..+|. .......+.+ +|.+|.+.+..... ....+..||+.+.+|+.+ ++|..
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~-~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~ 489 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPV-ARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT 489 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCC-CCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCc-cccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC
Confidence 567899999999999886 321 01122 1122456778 99999998764322 345689999999999987 44543
Q ss_pred CCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcC--CceeEEEEeC--CCCccccceEEEe-C-CEEEEEEeC------
Q 038188 256 PYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNE--MNWIQQFAIG--PFLGVKSPCGFWK-N-NAVLMESIN------ 322 (384)
Q Consensus 256 ~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~--~~~~~~~~~~~~~-~-~~il~~~~~------ 322 (384)
. .....+.+ +|+|+++....... ++|+++- ..|..+.... |.+...+...+.. + ++|++..+.
T Consensus 490 R--~~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~ 565 (695)
T 2zwa_A 490 R--FRHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTT 565 (695)
T ss_dssp C--BSCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSC
T ss_pred c--ccceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCe
Confidence 2 22234443 99999985433223 7888866 8899865422 2222222322322 3 677666431
Q ss_pred --CeEEEEECCCCe------EEEEeec-cCCCCcceEEEEEEe-ccceeCCCCC
Q 038188 323 --GKLLLYDLVVQE------MRDLGRF-SSGELGAAILIYCYK-ESLIRLKGEE 366 (384)
Q Consensus 323 --~~l~~yd~~t~~------~~~v~~~-~~~~~~~~~~~~~y~-~sL~~~~~~~ 366 (384)
..+..||+++++ |+.+... ... ......+.+- ..+.-+.+..
T Consensus 566 ~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~--R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 566 VSDKAIIFKYDAENATEPITVIKKLQHPLFQ--RYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp BCCEEEEEEECTTCSSCCEEEEEEEECGGGC--CBSCEEEEEETTEEEEECCBC
T ss_pred eeCcEEEEEccCCccccceEEEEcCCCCCCC--cccceEEEeCCCEEEEECCcc
Confidence 459999999999 8888652 111 1233455566 6666666543
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.87 E-value=7.7e-05 Score=74.77 Aligned_cols=216 Identities=10% Similarity=0.005 Sum_probs=119.7
Q ss_pred cccceEEEeeC---CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccE
Q 038188 108 PYDGIFCLCDG---GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAH 184 (384)
Q Consensus 108 s~~GLl~~~~~---~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (384)
..||.|++..+ ..+.++||.|++|..+++++..+. ......-+ .+ |++.+... . ++......
T Consensus 251 ~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~--------~~s~~~~~-dg--~iyv~GG~---~-~~~~~~~~ 315 (656)
T 1k3i_A 251 DGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARG--------YQSSATMS-DG--RVFTIGGS---W-SGGVFEKN 315 (656)
T ss_dssp CTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCS--------SCEEEECT-TS--CEEEECCC---C-CSSSCCCC
T ss_pred CCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccc--------ccceEEec-CC--eEEEEeCc---c-cCCccccc
Confidence 46787777653 479999999999999987664321 11111111 11 34444221 1 01112567
Q ss_pred EEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCC----CCccEEEEEEcCCceeeee-cCCCC----
Q 038188 185 VAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGD----FHSKLILLFRISDEEFQEI-QRPCI---- 255 (384)
Q Consensus 185 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~----~~~~~il~fD~~~~~~~~i-~~P~~---- 255 (384)
+++|+..+++|+.+.... ..|.........+..+|.+|.+....+. .....+..||+.++.|... ..+..
T Consensus 316 ~e~yd~~t~~W~~~~~~~-~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~ 394 (656)
T 1k3i_A 316 GEVYSPSSKTWTSLPNAK-VNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGV 394 (656)
T ss_dssp EEEEETTTTEEEEETTSC-SGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEE
T ss_pred ceEeCCCCCcceeCCCcc-ccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccccccc
Confidence 999999999999874321 0121111112334467888877753211 1256789999999988642 11111
Q ss_pred --CCCCceeEE--EECCeEEEEEecC-------CCCeEEEEEEcC--CceeEEE--EeCCCCccccceEEEeCCEEEEEE
Q 038188 256 --PYTPFESLA--PLNGSIALLHLDE-------SNQYIEIWVMNE--MNWIQQF--AIGPFLGVKSPCGFWKNNAVLMES 320 (384)
Q Consensus 256 --~~~~~~~l~--~~~G~L~l~~~~~-------~~~~l~iW~l~~--~~W~~~~--~i~~~~~~~~~~~~~~~~~il~~~ 320 (384)
.......++ ..+|+|+++.... ......|++.+- ..|.++. .+ |.....+...+..+++|++..
T Consensus 395 ~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~m-p~~R~~~~~~~l~~g~i~v~G 473 (656)
T 1k3i_A 395 APDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL-YFARTFHTSVVLPDGSTFITG 473 (656)
T ss_dssp CCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC-SSCCBSCEEEECTTSCEEEEC
T ss_pred CCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCC-CCCcccCCeEECCCCCEEEEC
Confidence 001111111 2489999984321 112235665554 7898864 22 222222333344477777664
Q ss_pred e------------CCeEEEEECCCCeEEEEee
Q 038188 321 I------------NGKLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 321 ~------------~~~l~~yd~~t~~~~~v~~ 340 (384)
+ ...+..||+++++|+.+..
T Consensus 474 G~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~ 505 (656)
T 1k3i_A 474 GQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNP 505 (656)
T ss_dssp CBSBCCTTCCCSBCCCCEEEEGGGTEEEECCC
T ss_pred CcccCcCcCCCCcccceEEEcCCCCceeecCC
Confidence 3 1358999999999998754
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.65 E-value=2.2e-05 Score=71.63 Aligned_cols=43 Identities=30% Similarity=0.537 Sum_probs=38.3
Q ss_pred cccccCCCCHHHHHHHHccCChhhhhhhhcccHhhHhhcCChH
Q 038188 7 DIASSMLMPEDVRLEILSRLPVKSLMRLRCVCKSWYALIENPK 49 (384)
Q Consensus 7 ~~~~~~~LP~dll~eIl~rLp~~~l~r~r~VcK~W~~li~~p~ 49 (384)
....+..||+|++.+||.+|+.+++.+++.|||+|+.++.+|.
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 3456899999999999999999999999999999999987765
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.12 E-value=0.00019 Score=70.81 Aligned_cols=37 Identities=30% Similarity=0.538 Sum_probs=29.5
Q ss_pred ccccCCCCHHHHHHHHccCC-hhhhhhhhcccHhhHhh
Q 038188 8 IASSMLMPEDVRLEILSRLP-VKSLMRLRCVCKSWYAL 44 (384)
Q Consensus 8 ~~~~~~LP~dll~eIl~rLp-~~~l~r~r~VcK~W~~l 44 (384)
...+..||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 35678999999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.52 E-value=0.00089 Score=65.91 Aligned_cols=34 Identities=18% Similarity=0.450 Sum_probs=31.9
Q ss_pred cCCCCHHHHHHHHccC-ChhhhhhhhcccHhhHhh
Q 038188 11 SMLMPEDVRLEILSRL-PVKSLMRLRCVCKSWYAL 44 (384)
Q Consensus 11 ~~~LP~dll~eIl~rL-p~~~l~r~r~VcK~W~~l 44 (384)
...||||++.+||.+| |.+++.++..|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 3579999999999999 899999999999999987
No 28
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.95 E-value=0.71 Score=39.86 Aligned_cols=188 Identities=11% Similarity=0.040 Sum_probs=95.0
Q ss_pred cccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEE
Q 038188 108 PYDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHV 185 (384)
Q Consensus 108 s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (384)
..+|.+.+.. ...++++|| +++......+... ....++..|+... +.... .. ...+
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~--------~~~~~i~~~~~g~---l~v~~---~~-------~~~i 164 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKG--------SYPSFITLGSDNA---LWFTE---NQ-------NNAI 164 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT--------CCEEEEEECTTSC---EEEEE---TT-------TTEE
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCCC--------CCCceEEEcCCCC---EEEEe---CC-------CCEE
Confidence 3467666654 458899999 7766654322111 1234556665432 11110 00 3456
Q ss_pred EEEEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeE
Q 038188 186 AVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESL 263 (384)
Q Consensus 186 ~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l 263 (384)
.+|+. ++........ .... .-.++.+ +|.+|+.. ...+.|..||. +.++..+.+|... ..-..+
T Consensus 165 ~~~~~-~g~~~~~~~~-~~~~-----~~~~i~~~~~g~l~v~~-----~~~~~i~~~~~-~g~~~~~~~~~~~-~~~~~i 230 (299)
T 2z2n_A 165 GRITE-SGDITEFKIP-TPAS-----GPVGITKGNDDALWFVE-----IIGNKIGRITT-SGEITEFKIPTPN-ARPHAI 230 (299)
T ss_dssp EEECT-TCCEEEEECS-STTC-----CEEEEEECTTSSEEEEE-----TTTTEEEEECT-TCCEEEEECSSTT-CCEEEE
T ss_pred EEEcC-CCcEEEeeCC-CCCC-----cceeEEECCCCCEEEEc-----cCCceEEEECC-CCcEEEEECCCCC-CCceeE
Confidence 66776 5555443111 0000 0123443 57875544 33678999999 7777766665322 222234
Q ss_pred EEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEEEEEEeCCeEEEEECCCCeEE
Q 038188 264 APL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAVLMESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 264 ~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~~~ 336 (384)
... +|.|++..... ..+.+|-.+ ..- ..+.+.........+.+ .++.+++....+.++.||+++++++
T Consensus 231 ~~~~~g~l~v~~~~~--~~i~~~d~~-g~~-~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 231 TAGAGIDLWFTEWGA--NKIGRLTSN-NII-EEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp EECSTTCEEEEETTT--TEEEEEETT-TEE-EEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-----
T ss_pred EECCCCCEEEeccCC--ceEEEECCC-Cce-EEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcccCC
Confidence 443 67877765433 555555442 221 12222211112233445 6788888766678999999988764
No 29
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.83 E-value=2.4 Score=39.01 Aligned_cols=208 Identities=10% Similarity=0.122 Sum_probs=101.0
Q ss_pred CCCCccccceeec-cccceEEEeeCCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEec
Q 038188 95 ENIHRPISRELLG-PYDGIFCLCDGGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWN 173 (384)
Q Consensus 95 ~~~~~~~~~~~~~-s~~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~ 173 (384)
|.+....+..+++ |.+++|-+..++.++|||..|++...+-..... . .....+.+.+. +.|-++.-
T Consensus 100 p~~~~d~y~~~l~wS~~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~-----~--~~V~sv~fspd-g~~lasgs----- 166 (420)
T 4gga_A 100 PEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQP-----G--EYISSVAWIKE-GNYLAVGT----- 166 (420)
T ss_dssp TTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCST-----T--CCEEEEEECTT-SSEEEEEE-----
T ss_pred CCCcccccceeEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCC-----C--CcEEEEEECCC-CCEEEEEE-----
Confidence 4443333334555 567788777788999999999988765322211 0 12344555553 34433321
Q ss_pred ccccccccccEEEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeeecCC
Q 038188 174 EKIQDAYEHAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRP 253 (384)
Q Consensus 174 ~~~~~~~~~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P 253 (384)
. .-.+.+++..++.-...... + ...-.++..+|.+-... .....+..+|..........+.
T Consensus 167 ~-------Dg~v~iWd~~~~~~~~~~~~--h-----~~~v~~~s~~~~~l~sg-----s~d~~i~~~d~~~~~~~~~~~~ 227 (420)
T 4gga_A 167 S-------SAEVQLWDVQQQKRLRNMTS--H-----SARVGSLSWNSYILSSG-----SRSGHIHHHDVRVAEHHVATLS 227 (420)
T ss_dssp T-------TSCEEEEETTTTEEEEEECC--C-----SSCEEEEEEETTEEEEE-----ETTSEEEEEETTSSSCEEEEEE
T ss_pred C-------CCeEEEEEcCCCcEEEEEeC--C-----CCceEEEeeCCCEEEEE-----eCCCceeEeeecccceeeEEec
Confidence 1 45688888877632111000 0 01112344455443333 2356667777665443322222
Q ss_pred CCCCCCceeEEE-ECCeEEEEEecCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEe-CCEEEEE-E--eCCeEE
Q 038188 254 CIPYTPFESLAP-LNGSIALLHLDESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWK-NNAVLME-S--INGKLL 326 (384)
Q Consensus 254 ~~~~~~~~~l~~-~~G~L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~-~--~~~~l~ 326 (384)
... .....+.. .+|+..+....+ ..+.||-... ..+..+........-...+.+.. +..++.. . .++.+.
T Consensus 228 ~h~-~~~~~~~~~~~g~~l~s~~~D--~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~ 304 (420)
T 4gga_A 228 GHS-QEVCGLRWAPDGRHLASGGND--NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 304 (420)
T ss_dssp CCS-SCEEEEEECTTSSEEEEEETT--SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEE
T ss_pred ccc-cceeeeeecCCCCeeeeeecc--ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEE
Confidence 111 11122222 255555555554 7888998765 22222222222221111222222 3334333 2 356789
Q ss_pred EEECCCCeEEE
Q 038188 327 LYDLVVQEMRD 337 (384)
Q Consensus 327 ~yd~~t~~~~~ 337 (384)
+||+.+++...
T Consensus 305 iwd~~t~~~~~ 315 (420)
T 4gga_A 305 IWNVCSGACLS 315 (420)
T ss_dssp EEETTTTEEEE
T ss_pred EEeCCccccce
Confidence 99999987544
No 30
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=94.24 E-value=2.4 Score=36.46 Aligned_cols=201 Identities=12% Similarity=0.093 Sum_probs=103.7
Q ss_pred cccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEE
Q 038188 108 PYDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHV 185 (384)
Q Consensus 108 s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (384)
+.+|-+.+.+ ...+.++|+..+....++....... . .....++.+++..+..-|... .. ...+
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~--~--~~~p~~i~~~~~~g~l~v~~~----~~-------~~~i 102 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDS--Q--LLYPNRVAVVRNSGDIIVTER----SP-------THQI 102 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTT--C--BSSEEEEEEETTTTEEEEEEC----GG-------GCEE
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcc--c--ccCceEEEEEcCCCeEEEEcC----CC-------CCEE
Confidence 3456666654 4578999998665555554221100 0 012345555433332222110 00 3457
Q ss_pred EEEEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeE
Q 038188 186 AVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESL 263 (384)
Q Consensus 186 ~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l 263 (384)
.+|+.....-+.........| .++.+ +|.+|... .....|..||...+....+..+... .....+
T Consensus 103 ~~~d~~g~~~~~~~~~~~~~~-------~~i~~~~~g~l~v~~-----~~~~~i~~~~~~g~~~~~~~~~~~~-~~p~~i 169 (286)
T 1q7f_A 103 QIYNQYGQFVRKFGATILQHP-------RGVTVDNKGRIIVVE-----CKVMRVIIFDQNGNVLHKFGCSKHL-EFPNGV 169 (286)
T ss_dssp EEECTTSCEEEEECTTTCSCE-------EEEEECTTSCEEEEE-----TTTTEEEEECTTSCEEEEEECTTTC-SSEEEE
T ss_pred EEECCCCcEEEEecCccCCCc-------eEEEEeCCCCEEEEE-----CCCCEEEEEcCCCCEEEEeCCCCcc-CCcEEE
Confidence 777743332222211100111 23333 68766544 3467899999887766666443221 122334
Q ss_pred EEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccc--eEEEeCCEEEEEEe-CC-eEEEEECCCCeEEEE
Q 038188 264 APL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSP--CGFWKNNAVLMESI-NG-KLLLYDLVVQEMRDL 338 (384)
Q Consensus 264 ~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~--~~~~~~~~il~~~~-~~-~l~~yd~~t~~~~~v 338 (384)
+.. +|.|++..... ..+.+|-.+. .. +..+........| +++..++.+++... +. .+..||.+.+.++.+
T Consensus 170 ~~~~~g~l~v~~~~~--~~i~~~~~~g-~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 170 VVNDKQEIFISDNRA--HCVKVFNYEG-QY--LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISAL 244 (286)
T ss_dssp EECSSSEEEEEEGGG--TEEEEEETTC-CE--EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEE
T ss_pred EECCCCCEEEEECCC--CEEEEEcCCC-CE--EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEE
Confidence 443 67887766544 6777776543 22 2233221112234 44555778877764 33 799999988877777
Q ss_pred eec
Q 038188 339 GRF 341 (384)
Q Consensus 339 ~~~ 341 (384)
...
T Consensus 245 ~~~ 247 (286)
T 1q7f_A 245 ESK 247 (286)
T ss_dssp EES
T ss_pred ccc
Confidence 653
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.93 E-value=4.7 Score=35.73 Aligned_cols=139 Identities=8% Similarity=0.106 Sum_probs=75.0
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEEEC----ceEEEEEeecCCCCccEEEEEEcCCcee-eeecCCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLN----GVFYWFVSRAGDFHSKLILLFRISDEEF-QEIQRPCIP 256 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~----G~lywl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~ 256 (384)
.-.+.+|+..++.|..+...... ...-.++.+. |.+.... ...+.|..+|+.+..- ..+.+....
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~l~~~-----~~d~~i~v~d~~~~~~~~~~~~~~~~ 147 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVH-----SASVNSVQWAPHEYGPLLLVA-----SSDGKVSVVEFKENGTTSPIIIDAHA 147 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCC-----SSCEEEEEECCGGGCSEEEEE-----ETTSEEEEEECCTTSCCCEEEEECCT
T ss_pred CCEEEEEEcCCCceeEeeeecCC-----CcceEEEEeCCCCCCCEEEEe-----cCCCcEEEEecCCCCceeeEEecCCC
Confidence 35688888888877654322111 0001122222 4443333 2366788888876522 111111111
Q ss_pred CCCceeEEEE--------------CCeEEEEEecCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeC---CEEE
Q 038188 257 YTPFESLAPL--------------NGSIALLHLDESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKN---NAVL 317 (384)
Q Consensus 257 ~~~~~~l~~~--------------~G~L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~il 317 (384)
..-..+... +|.+.++...+ ..+.+|-+.. ..|.....+........-+.+.++ +.++
T Consensus 148 -~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l 224 (379)
T 3jrp_A 148 -IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD--NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL 224 (379)
T ss_dssp -TCEEEEEECCCC----------CTTCEEEEEETT--SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred -CceEEEEEcCccccccccccCCCCCCEEEEEeCC--CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeE
Confidence 111122222 46666666555 7899999976 567777766544322334455555 6665
Q ss_pred EE-EeCCeEEEEECCCC
Q 038188 318 ME-SINGKLLLYDLVVQ 333 (384)
Q Consensus 318 ~~-~~~~~l~~yd~~t~ 333 (384)
+. ..++.+.+||++++
T Consensus 225 ~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 225 ASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEETTSCEEEEEESST
T ss_pred EEEeCCCEEEEEeCCCC
Confidence 55 55778999999886
No 32
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.63 E-value=6 Score=36.17 Aligned_cols=187 Identities=8% Similarity=-0.054 Sum_probs=96.9
Q ss_pred cceEEEeeCCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEE
Q 038188 110 DGIFCLCDGGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYT 189 (384)
Q Consensus 110 ~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (384)
.+.|++.....+...++.+++...+-... ....++.+|+..+...++-. . ..++..++
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~~~----------~~~~gl~~d~~~~~ly~~D~-----~-------~~~I~r~~ 144 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLLNNL----------ENAIALDFHHRRELVFWSDV-----T-------LDRILRAN 144 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEECSC----------SCEEEEEEETTTTEEEEEET-----T-------TTEEEEEE
T ss_pred cceeEeecCccceeeccCCCcEEEEecCC----------CccEEEEEecCCCeEEEEeC-----C-------CCcEEEEe
Confidence 57777777778888888776655432211 23567888876553322211 0 34566777
Q ss_pred cCCCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE
Q 038188 190 SSTDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL 266 (384)
Q Consensus 190 s~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 266 (384)
..++..+.+.......| .++.+ +|.|||.. .....|..+|++...-..+-. ... .....+++.
T Consensus 145 ~~g~~~~~~~~~~~~~p-------~glavd~~~g~lY~~d-----~~~~~I~~~~~dg~~~~~l~~-~~l-~~P~giavd 210 (386)
T 3v65_B 145 LNGSNVEEVVSTGLESP-------GGLAVDWVHDKLYWTD-----SGTSRIEVANLDGAHRKVLLW-QSL-EKPRAIALH 210 (386)
T ss_dssp TTSCCEEEEECSSCSCC-------CCEEEETTTTEEEEEE-----TTTTEEEECBTTSCSCEEEEC-SSC-SCEEEEEEE
T ss_pred cCCCCcEEEEeCCCCCc-------cEEEEEeCCCeEEEEc-----CCCCeEEEEeCCCCceEEeec-CCC-CCCcEEEEE
Confidence 76655443311100111 23333 68999987 346789999987654333311 111 122344444
Q ss_pred --CCeEEEEEecCCCCeEEEEEEcC-CceeEEEEeCCCCccccc--eEEE-eCCEEEEEEe-CCeEEEEECCCCeEEEE
Q 038188 267 --NGSIALLHLDESNQYIEIWVMNE-MNWIQQFAIGPFLGVKSP--CGFW-KNNAVLMESI-NGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 267 --~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~--~~~~-~~~~il~~~~-~~~l~~yd~~t~~~~~v 338 (384)
+|.|++..... .-.|++.+- .+-.+.. +. ..+..| +++. .++.|++... .+.+..+|+.....+.+
T Consensus 211 p~~g~ly~td~~~---~~~I~r~~~dG~~~~~~-~~--~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 211 PMEGTIYWTDWGN---TPRIEASSMDGSGRRII-AD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 283 (386)
T ss_dssp TTTTEEEEEECSS---SCEEEEEETTSCSCEEE-EC--SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEE
T ss_pred cCCCeEEEeccCC---CCEEEEEeCCCCCcEEE-EE--CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEE
Confidence 67788875432 124555543 2222211 11 113334 3444 3567766643 45688888776544443
No 33
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=92.01 E-value=6.2 Score=34.93 Aligned_cols=140 Identities=10% Similarity=-0.071 Sum_probs=79.9
Q ss_pred ccEEEEEEcCCCcc-ccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceee-eecCCCCC--C
Q 038188 182 HAHVAVYTSSTDSW-RVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQ-EIQRPCIP--Y 257 (384)
Q Consensus 182 ~~~~~vyss~t~~W-~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~--~ 257 (384)
...+.+++..|++- +++... ..|.. -.+.-+|.+|... ...+.|..+|+.+.+.. .++.+... .
T Consensus 63 ~~~v~viD~~t~~~~~~i~~~--~~p~~-----i~~~~~g~lyv~~-----~~~~~v~~iD~~t~~~~~~i~~g~~~~~~ 130 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITGF--TSPRY-----IHFLSDEKAYVTQ-----IWDYRIFIINPKTYEITGYIECPDMDMES 130 (328)
T ss_dssp GTEEEEEETTTCCEEEEEECC--SSEEE-----EEEEETTEEEEEE-----BSCSEEEEEETTTTEEEEEEECTTCCTTT
T ss_pred CCEEEEEECcccEEEEEcCCC--CCCcE-----EEEeCCCeEEEEE-----CCCCeEEEEECCCCeEEEEEEcCCccccC
Confidence 46788888887654 222211 11111 1122478887765 23689999999988765 46665411 0
Q ss_pred CCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEEEEEEeC-----------CeEE
Q 038188 258 TPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAVLMESIN-----------GKLL 326 (384)
Q Consensus 258 ~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~-----------~~l~ 326 (384)
.....++..+|+|++..... ...+.++-++.....+ ++.... ...-+.+.+++++++.... ..+.
T Consensus 131 ~~p~~i~~~~~~lyv~~~~~-~~~v~viD~~t~~~~~--~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~ 206 (328)
T 3dsm_A 131 GSTEQMVQYGKYVYVNCWSY-QNRILKIDTETDKVVD--ELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLY 206 (328)
T ss_dssp CBCCCEEEETTEEEEEECTT-CCEEEEEETTTTEEEE--EEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEE
T ss_pred CCcceEEEECCEEEEEcCCC-CCEEEEEECCCCeEEE--EEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEE
Confidence 11224455788898886521 2555555444333333 332211 1234556667888776542 5799
Q ss_pred EEECCCCeEEE
Q 038188 327 LYDLVVQEMRD 337 (384)
Q Consensus 327 ~yd~~t~~~~~ 337 (384)
.+|++++++..
T Consensus 207 ~id~~t~~v~~ 217 (328)
T 3dsm_A 207 RIDAETFTVEK 217 (328)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCCCeEEE
Confidence 99999988763
No 34
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=91.91 E-value=7.1 Score=35.42 Aligned_cols=190 Identities=11% Similarity=0.085 Sum_probs=98.7
Q ss_pred ccceEEEeeCCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEE
Q 038188 109 YDGIFCLCDGGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVY 188 (384)
Q Consensus 109 ~~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 188 (384)
.+.++....++.+.|||..+++...+-..... .....+.+.+ .+.+-++.- . .-.+.+|
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~--------~~v~~v~~s~-~~~~l~~~~-----~-------dg~i~iw 161 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDES--------TYVASVKWSH-DGSFLSVGL-----G-------NGLVDIY 161 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTT--------CCEEEEEECT-TSSEEEEEE-----T-------TSCEEEE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCC--------CCEEEEEECC-CCCEEEEEC-----C-------CCeEEEE
Confidence 45566666678999999999987665332211 2334455555 233332221 1 3567888
Q ss_pred EcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-C
Q 038188 189 TSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-N 267 (384)
Q Consensus 189 ss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~ 267 (384)
+..++.-...-.. ....-.++..+|...... ...+.|..+|+....-....+.... ..-..+... +
T Consensus 162 d~~~~~~~~~~~~-------~~~~v~~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~ 228 (401)
T 4aez_A 162 DVESQTKLRTMAG-------HQARVGCLSWNRHVLSSG-----SRSGAIHHHDVRIANHQIGTLQGHS-SEVCGLAWRSD 228 (401)
T ss_dssp ETTTCCEEEEECC-------CSSCEEEEEEETTEEEEE-----ETTSEEEEEETTSSSCEEEEEECCS-SCEEEEEECTT
T ss_pred ECcCCeEEEEecC-------CCCceEEEEECCCEEEEE-----cCCCCEEEEecccCcceeeEEcCCC-CCeeEEEEcCC
Confidence 8876643211100 001112344566644444 3367888899874322221111111 112223332 5
Q ss_pred CeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEe-CCEEEEEE---eCCeEEEEECCCCeEE
Q 038188 268 GSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWK-NNAVLMES---INGKLLLYDLVVQEMR 336 (384)
Q Consensus 268 G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~---~~~~l~~yd~~t~~~~ 336 (384)
|.+.+....+ ..+.+|-+.. -..+..+.........+.+.+ +..++... .++.+.+||+.+++..
T Consensus 229 ~~~l~s~~~d--~~v~iwd~~~--~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 229 GLQLASGGND--NVVQIWDARS--SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp SSEEEEEETT--SCEEEEETTC--SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred CCEEEEEeCC--CeEEEccCCC--CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 6665555555 7899998875 223333433322223344444 34455544 3778999999887643
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=91.87 E-value=5.5 Score=34.05 Aligned_cols=190 Identities=12% Similarity=0.114 Sum_probs=96.7
Q ss_pred cccceEEEee---CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccE
Q 038188 108 PYDGIFCLCD---GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAH 184 (384)
Q Consensus 108 s~~GLl~~~~---~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (384)
..+|.+.+.. ...+.++|+..+....+..... ....++.+|+.. . ++... .. ...
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~---------~~~~~i~~~~~g-~--l~v~~----~~------~~~ 143 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL---------QHPRGVTVDNKG-R--IIVVE----CK------VMR 143 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC---------SCEEEEEECTTS-C--EEEEE----TT------TTE
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC---------CCceEEEEeCCC-C--EEEEE----CC------CCE
Confidence 4567766665 4678899965544444433211 123456666643 2 22110 00 345
Q ss_pred EEEEEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCcee
Q 038188 185 VAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFES 262 (384)
Q Consensus 185 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~ 262 (384)
+.+|+.....-+..... .... ...++.+ +|.+|... ...+.|..||...+....+..+... .....
T Consensus 144 i~~~~~~g~~~~~~~~~-~~~~-----~p~~i~~~~~g~l~v~~-----~~~~~i~~~~~~g~~~~~~~~~g~~-~~p~~ 211 (286)
T 1q7f_A 144 VIIFDQNGNVLHKFGCS-KHLE-----FPNGVVVNDKQEIFISD-----NRAHCVKVFNYEGQYLRQIGGEGIT-NYPIG 211 (286)
T ss_dssp EEEECTTSCEEEEEECT-TTCS-----SEEEEEECSSSEEEEEE-----GGGTEEEEEETTCCEEEEESCTTTS-CSEEE
T ss_pred EEEEcCCCCEEEEeCCC-CccC-----CcEEEEECCCCCEEEEE-----CCCCEEEEEcCCCCEEEEEccCCcc-CCCcE
Confidence 66777544332222110 0000 0123444 57866543 3477899999987766665443211 12233
Q ss_pred EEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEEEEEEeCCeEEEEECCCC
Q 038188 263 LAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAVLMESINGKLLLYDLVVQ 333 (384)
Q Consensus 263 l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~ 333 (384)
+... +|.|++..... ...+.+|-.+ ..-...............+++.+++.+++...++.+.+|+....
T Consensus 212 i~~d~~G~l~v~~~~~-~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 212 VGINSNGEILIADNHN-NFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp EEECTTCCEEEEECSS-SCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred EEECCCCCEEEEeCCC-CEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcccc
Confidence 4443 77888876543 1277777543 22222222211111123455666888887766777888887553
No 36
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=91.05 E-value=14 Score=37.32 Aligned_cols=159 Identities=9% Similarity=-0.027 Sum_probs=83.5
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYT 258 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~ 258 (384)
..++++++.....-+.+... .+ ..-.++.+ +|.|||... .....|..++++...-..+-. ... .
T Consensus 492 ~~~I~v~~ldG~~~~~l~~~--~l-----~~P~gIaVDp~~g~LYwtD~----g~~~~I~~~~~dG~~~~~lv~-~~l-~ 558 (791)
T 3m0c_C 492 LGTVSVADTKGVKRKTLFRE--NG-----SKPRAIVVDPVHGFMYWTDW----GTPAKIKKGGLNGVDIYSLVT-ENI-Q 558 (791)
T ss_dssp TTEEEEEETTSSSEEEEEEC--TT-----CCEEEEEEETTTTEEEEEEC----SSSCEEEEEETTSCCEEEEEC-SSC-S
T ss_pred CCeEEEEeCCCCeEEEEEeC--CC-----CCcceEEEecCCCCEEEecC----CCCCeEEEEecCCCceEEEEe-CCC-C
Confidence 45677887765543332110 10 11235555 589999873 224789999997655444311 111 1
Q ss_pred CceeEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEe-CCEEEEEEe-CCeEEEEECCCCe
Q 038188 259 PFESLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWK-NNAVLMESI-NGKLLLYDLVVQE 334 (384)
Q Consensus 259 ~~~~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~~-~~~l~~yd~~t~~ 334 (384)
.-..|+.- +|+||++.... ..|..--++. .-.++. +.....+..|+++.- ++.|++... ...|..+|..+++
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~--~~I~~~d~dG-~~~~~v-~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKL--HSISSIDVNG-GNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTT--TEEEEEETTS-CSCEEE-EECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred CceEEEEecCCCeEEEEeCCC--CcEEEEecCC-CceEEE-ecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCc
Confidence 22244543 78899986543 4444444443 222211 111112456766653 567777754 4668888877764
Q ss_pred -EEEEeeccCCCCcceEEEEEEecccee
Q 038188 335 -MRDLGRFSSGELGAAILIYCYKESLIR 361 (384)
Q Consensus 335 -~~~v~~~~~~~~~~~~~~~~y~~sL~~ 361 (384)
.+.| ..+.. ..+.+.+|.+..-+
T Consensus 635 ~~~~l-~~~l~---~P~~i~v~h~~~Qp 658 (791)
T 3m0c_C 635 DVNLL-AENLL---SPEDMVLFHNLTQP 658 (791)
T ss_dssp CCEEE-ECSCS---CCCCEEEESGGGSC
T ss_pred ceEEe-ecCCC---CceeEeeeccccCC
Confidence 3333 22332 33456777776543
No 37
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=90.38 E-value=9.9 Score=38.14 Aligned_cols=139 Identities=8% Similarity=0.104 Sum_probs=73.6
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEEE--C--ceEEEEEeecCCCCccEEEEEEcCCceee-eecCCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--N--GVFYWFVSRAGDFHSKLILLFRISDEEFQ-EIQRPCIP 256 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~--G~lywl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~ 256 (384)
.-.+.+|+..++.|..+....... ..-.++.+ + |.....+ ...+.|..+|+.+..-. .+.+....
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h~-----~~V~~v~~sp~~~~~~l~sg-----s~dg~I~vwdl~~~~~~~~~~~~~~~ 145 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVHS-----ASVNSVQWAPHEYGPLLLVA-----SSDGKVSVVEFKENGTTSPIIIDAHA 145 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECCGGGCSEEEEE-----ETTSEEEEEECCSSSCCCCEEEECCS
T ss_pred CCeEEEEECCCCcccccccccCCC-----CCeEEEEECCCCCCCEEEEE-----eCCCcEEEEEeecCCCcceeEeecCC
Confidence 456888888888776543221110 00112222 2 4444443 23667888888665221 11111110
Q ss_pred CCCceeEEEE--------------CCeEEEEEecCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeC---CEEE
Q 038188 257 YTPFESLAPL--------------NGSIALLHLDESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKN---NAVL 317 (384)
Q Consensus 257 ~~~~~~l~~~--------------~G~L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~il 317 (384)
..-..+... +|.+.++...+ ..+.+|-+.. ..+.....+..+..-..-+.+.++ +.++
T Consensus 146 -~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d--g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l 222 (753)
T 3jro_A 146 -IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD--NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL 222 (753)
T ss_dssp -SCEEEEEECCCC---------CGGGCCEEEEETT--SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred -CceEEEEecCcccccccccccCCCCCEEEEEECC--CeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEE
Confidence 111112211 35555555555 7899999976 556666666544422333445555 6665
Q ss_pred EE-EeCCeEEEEECCCC
Q 038188 318 ME-SINGKLLLYDLVVQ 333 (384)
Q Consensus 318 ~~-~~~~~l~~yd~~t~ 333 (384)
+. ..++.+.+||+.++
T Consensus 223 ~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 223 ASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEEESSSCEEEEEESSS
T ss_pred EEEecCCEEEEecCCCC
Confidence 55 55778999999886
No 38
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=89.34 E-value=13 Score=33.97 Aligned_cols=209 Identities=9% Similarity=-0.035 Sum_probs=102.9
Q ss_pred cccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEE
Q 038188 108 PYDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHV 185 (384)
Q Consensus 108 s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (384)
..+|.|.+.+ .+.++.+++.++....+-..... ...++.+|+..+...+.-. . ...+
T Consensus 125 ~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~---------~p~glavd~~~g~lY~~d~----~--------~~~I 183 (386)
T 3v65_B 125 HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE---------SPGGLAVDWVHDKLYWTDS----G--------TSRI 183 (386)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS---------CCCCEEEETTTTEEEEEET----T--------TTEE
T ss_pred cCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC---------CccEEEEEeCCCeEEEEcC----C--------CCeE
Confidence 4567776665 35777888877654443222111 2234666765443222110 0 3456
Q ss_pred EEEEcCCCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCcee
Q 038188 186 AVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFES 262 (384)
Q Consensus 186 ~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~ 262 (384)
++++.....-+.+.......| .++.+ +|.|||... .....|..+|++...-..+--. .. ...-.
T Consensus 184 ~~~~~dg~~~~~l~~~~l~~P-------~giavdp~~g~ly~td~----~~~~~I~r~~~dG~~~~~~~~~-~~-~~PnG 250 (386)
T 3v65_B 184 EVANLDGAHRKVLLWQSLEKP-------RAIALHPMEGTIYWTDW----GNTPRIEASSMDGSGRRIIADT-HL-FWPNG 250 (386)
T ss_dssp EECBTTSCSCEEEECSSCSCE-------EEEEEETTTTEEEEEEC----SSSCEEEEEETTSCSCEEEECS-SC-SCEEE
T ss_pred EEEeCCCCceEEeecCCCCCC-------cEEEEEcCCCeEEEecc----CCCCEEEEEeCCCCCcEEEEEC-CC-CCeee
Confidence 666654432221111000111 23444 589999864 2247899999976544333111 01 11223
Q ss_pred EEE--ECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEE-eCCEEEEEEe-CCeEEEEECCC-CeEEE
Q 038188 263 LAP--LNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFW-KNNAVLMESI-NGKLLLYDLVV-QEMRD 337 (384)
Q Consensus 263 l~~--~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~~~il~~~~-~~~l~~yd~~t-~~~~~ 337 (384)
|+. .+|+||++.... ..+...-++.. -.+.. +. ..+..|.++. .++.+++... .+.+..+|..+ +..+.
T Consensus 251 lavd~~~~~lY~aD~~~--~~I~~~d~dG~-~~~~~-~~--~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAKH--HVIERANLDGS-HRKAV-IS--QGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEI 324 (386)
T ss_dssp EEEEGGGTEEEEEETTT--TEEEEECTTSC-SCEEE-EC--SSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEEeCCCCEEEEEECCC--CEEEEEeCCCC-eeEEE-EE--CCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEE
Confidence 454 478899987544 44444433331 11111 11 1134565543 3567777654 56799999544 44555
Q ss_pred EeeccCCCCcceEEEEEEeccce
Q 038188 338 LGRFSSGELGAAILIYCYKESLI 360 (384)
Q Consensus 338 v~~~~~~~~~~~~~~~~y~~sL~ 360 (384)
+.. +.. ....+.+|.+...
T Consensus 325 i~~-~~~---~p~gi~v~~~~~q 343 (386)
T 3v65_B 325 IRN-KLH---FPMDIHTLHPQRQ 343 (386)
T ss_dssp EEC-SCS---CCCCEEEESGGGS
T ss_pred Ecc-CCC---CCceEEEEchhcC
Confidence 543 222 2334666766554
No 39
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=89.32 E-value=12 Score=33.61 Aligned_cols=187 Identities=9% Similarity=-0.026 Sum_probs=96.3
Q ss_pred cceEEEeeCCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEE
Q 038188 110 DGIFCLCDGGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYT 189 (384)
Q Consensus 110 ~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (384)
.+.|++.+...+...++.+.+...+-... ....++.+|+..+...++-. . ...+..++
T Consensus 44 ~~~ll~~~~~~I~~i~~~g~~~~~~~~~~----------~~~~~l~~d~~~~~ly~~D~-----~-------~~~I~r~~ 101 (349)
T 3v64_C 44 EPVLLFANRIDIRQVLPHRSEYTLLLNNL----------ENAIALDFHHRRELVFWSDV-----T-------LDRILRAN 101 (349)
T ss_dssp CCEEEEECBSCEEEECTTSCCEEEEECSC----------SCEEEEEEETTTTEEEEEET-----T-------TTEEEEEE
T ss_pred CceeEeecccceEEEeCCCCeeEEeecCC----------CceEEEEEeccccEEEEEec-----c-------CCceEEEe
Confidence 56777777777888888766554432211 23567888876553322211 0 34566677
Q ss_pred cCCCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE
Q 038188 190 SSTDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL 266 (384)
Q Consensus 190 s~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 266 (384)
..++.-+.+.......| .++.+ +|.+||.. ...+.|..+|++...-..+.. ... .....+++.
T Consensus 102 ~~g~~~~~~~~~~~~~p-------~glavd~~~g~ly~~d-----~~~~~I~~~~~dG~~~~~l~~-~~l-~~P~~iavd 167 (349)
T 3v64_C 102 LNGSNVEEVVSTGLESP-------GGLAVDWVHDKLYWTD-----SGTSRIEVANLDGAHRKVLLW-QSL-EKPRAIALH 167 (349)
T ss_dssp TTSCSCEEEECSSCSCC-------CEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSCEEEEC-TTC-SCEEEEEEE
T ss_pred cCCCCceEEEeCCCCCc-------cEEEEecCCCeEEEEc-----CCCCeEEEEcCCCCceEEEEe-CCC-CCcceEEEe
Confidence 66654333211100111 23443 68999987 446789999997654333321 111 122344554
Q ss_pred --CCeEEEEEecCCCCeEEEEEEcC-CceeEEEEeCCCCccccceE--EE-eCCEEEEEEe-CCeEEEEECCCCeEEEE
Q 038188 267 --NGSIALLHLDESNQYIEIWVMNE-MNWIQQFAIGPFLGVKSPCG--FW-KNNAVLMESI-NGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 267 --~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~--~~-~~~~il~~~~-~~~l~~yd~~t~~~~~v 338 (384)
+|.|++..... .. .|++.+- ..-.+. +-. ..+..|.+ +. .++.|++... .+.+..+|+.....+.+
T Consensus 168 p~~g~ly~td~~~-~~--~I~r~~~dG~~~~~--~~~-~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~ 240 (349)
T 3v64_C 168 PMEGTIYWTDWGN-TP--RIEASSMDGSGRRI--IAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 240 (349)
T ss_dssp TTTTEEEEEECSS-SC--EEEEEETTSCSCEE--SCC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cCcCeEEEeccCC-CC--EEEEEeCCCCCcEE--EEE-CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEE
Confidence 67788876432 13 4444432 211111 101 12334444 44 3567766643 45688888776544443
No 40
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.22 E-value=10 Score=32.88 Aligned_cols=105 Identities=7% Similarity=0.011 Sum_probs=59.1
Q ss_pred CccEEEEEEcC--Cceee---ee-cCCCCCC--CCceeEEEE-CCe-EEEEEecCCCCeEEEEEEcC--CceeEEEEeCC
Q 038188 233 HSKLILLFRIS--DEEFQ---EI-QRPCIPY--TPFESLAPL-NGS-IALLHLDESNQYIEIWVMNE--MNWIQQFAIGP 300 (384)
Q Consensus 233 ~~~~il~fD~~--~~~~~---~i-~~P~~~~--~~~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~ 300 (384)
..+.|..+|+. +.++. .+ .+|.... .....+... +|+ |++..... ..+.+|-++. ..+..+..+..
T Consensus 198 ~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~--~~i~v~d~~~~~~~~~~~~~~~~ 275 (343)
T 1ri6_A 198 LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA--SLITVFSVSEDGSVLSKEGFQPT 275 (343)
T ss_dssp TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT--TEEEEEEECTTSCCEEEEEEEEC
T ss_pred CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC--CEEEEEEEcCCCCceEEeeeecC
Confidence 46778888884 34432 23 2343221 111123333 454 44433333 7999999984 56777666643
Q ss_pred CCccccceEEEeCCE-EEEEE-eCCeEEEE--ECCCCeEEEEee
Q 038188 301 FLGVKSPCGFWKNNA-VLMES-INGKLLLY--DLVVQEMRDLGR 340 (384)
Q Consensus 301 ~~~~~~~~~~~~~~~-il~~~-~~~~l~~y--d~~t~~~~~v~~ 340 (384)
... ...+.+.+++. +++.. .++.+.+| |.++++++.+..
T Consensus 276 ~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 276 ETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp SSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEE
T ss_pred CCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccc
Confidence 332 34456666665 44444 35667777 778888877754
No 41
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=89.15 E-value=11 Score=33.77 Aligned_cols=109 Identities=12% Similarity=0.126 Sum_probs=63.0
Q ss_pred ceEEECceEEEEEeecCCCCccEEEEEEcCCce--eeeecCCCCC-------CCCceeEEEECCeEEEEEecCCCCeEEE
Q 038188 214 NNANLNGVFYWFVSRAGDFHSKLILLFRISDEE--FQEIQRPCIP-------YTPFESLAPLNGSIALLHLDESNQYIEI 284 (384)
Q Consensus 214 ~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~--~~~i~~P~~~-------~~~~~~l~~~~G~L~l~~~~~~~~~l~i 284 (384)
.++..+|.+|.... .+.|.+||.++.+ |+. +++... ......++..+|.|++...+ ..+..
T Consensus 48 ~p~v~~~~v~~~~~------~g~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~---g~l~a 117 (376)
T 3q7m_A 48 HPALADNVVYAADR------AGLVKALNADDGKEIWSV-SLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK---AQVYA 117 (376)
T ss_dssp CCEEETTEEEEECT------TSEEEEEETTTCCEEEEE-ECCC---CCSCCCCCEEEEEEEETTEEEEEETT---SEEEE
T ss_pred ccEEECCEEEEEcC------CCeEEEEEccCCceeeee-cCccccccccccCcccccCceEeCCEEEEEcCC---CEEEE
Confidence 57888999987653 5699999996554 443 332211 11123455667887776533 33333
Q ss_pred EEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEeCCeEEEEECCCCeEEE
Q 038188 285 WVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 285 W~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~~~~ 337 (384)
+-.+. ..|... +.. .....|. ..++.+++...++.++.+|.+|++...
T Consensus 118 ~d~~tG~~~W~~~--~~~-~~~~~p~--~~~~~v~v~~~~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 118 LNTSDGTVAWQTK--VAG-EALSRPV--VSDGLVLIHTSNGQLQALNEADGAVKW 167 (376)
T ss_dssp EETTTCCEEEEEE--CSS-CCCSCCE--EETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred EECCCCCEEEEEe--CCC-ceEcCCE--EECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 33332 456542 211 1112232 237788888878889999999987543
No 42
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=88.73 E-value=4.6 Score=35.68 Aligned_cols=104 Identities=6% Similarity=-0.060 Sum_probs=58.7
Q ss_pred ccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEe
Q 038188 234 SKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWK 312 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 312 (384)
...++.+|..+.++..+...... .....++.. +|+|+++........+.+|-++...+..+..+.....-..-+.+.+
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~-~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp 95 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAAT-QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE 95 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEC-SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET
T ss_pred CEEEEEEcCCCCeEEEeeeeecc-CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC
Confidence 45677888888887765332211 112234433 7887766554334788889886666666555322111223355666
Q ss_pred CCE-EEEEE-eCCeEEEEECC-CCeEEEE
Q 038188 313 NNA-VLMES-INGKLLLYDLV-VQEMRDL 338 (384)
Q Consensus 313 ~~~-il~~~-~~~~l~~yd~~-t~~~~~v 338 (384)
+++ +++.. .++.+.+||+. +++.+.+
T Consensus 96 dg~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 96 ARQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 665 44444 45678899985 4444443
No 43
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=88.25 E-value=11 Score=31.73 Aligned_cols=185 Identities=10% Similarity=0.089 Sum_probs=93.0
Q ss_pred cccceEEEee-CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEE
Q 038188 108 PYDGIFCLCD-GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVA 186 (384)
Q Consensus 108 s~~GLl~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (384)
..+|-+.+.+ .+.++++|+.++....++.... ....++.+|+.. . +... . .. ...+.
T Consensus 75 ~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~---------~~p~~i~~~~~g-~--l~v~-~--~~-------~~~i~ 132 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL---------NYPEGLAVDTQG-A--VYVA-D--RG-------NNRVV 132 (270)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSCCEECCCCSC---------SSEEEEEECTTC-C--EEEE-E--GG-------GTEEE
T ss_pred CCCCCEEEEcCCCEEEEEeCCCceEeeeecCCc---------CCCcceEECCCC-C--EEEE-E--CC-------CCEEE
Confidence 3456665555 5689999998887665543221 123456667633 2 2211 1 10 34566
Q ss_pred EEEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEE
Q 038188 187 VYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLA 264 (384)
Q Consensus 187 vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~ 264 (384)
+|+.++......... .. ....++.+ +|.+|+.. ...+.|..||..+........... .....+.
T Consensus 133 ~~~~~~~~~~~~~~~--~~-----~~p~~i~~~~~g~l~v~~-----~~~~~i~~~~~~~~~~~~~~~~~~--~~p~~i~ 198 (270)
T 1rwi_B 133 KLAAGSKTQTVLPFT--GL-----NDPDGVAVDNSGNVYVTD-----TDNNRVVKLEAESNNQVVLPFTDI--TAPWGIA 198 (270)
T ss_dssp EECTTCCSCEECCCC--SC-----CSCCCEEECTTCCEEEEE-----GGGTEEEEECTTTCCEEECCCSSC--CSEEEEE
T ss_pred EEECCCceeEeeccc--cC-----CCceeEEEeCCCCEEEEE-----CCCCEEEEEecCCCceEeecccCC--CCceEEE
Confidence 665554433221111 10 01123444 58876654 336789999998766544322111 1223444
Q ss_pred EE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccc--eEEEeCCEEEEEE-eCCeEEEEECCCCe
Q 038188 265 PL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSP--CGFWKNNAVLMES-INGKLLLYDLVVQE 334 (384)
Q Consensus 265 ~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~--~~~~~~~~il~~~-~~~~l~~yd~~t~~ 334 (384)
.. +|.|++..... ..+.+|-.+.. -... + +......| +.+.+++.+++.. .++.+..|++..++
T Consensus 199 ~d~~g~l~v~~~~~--~~v~~~~~~~~-~~~~--~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 199 VDEAGTVYVTEHNT--NQVVKLLAGST-TSTV--L-PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp ECTTCCEEEEETTT--SCEEEECTTCS-CCEE--C-CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred ECCCCCEEEEECCC--CcEEEEcCCCC-ccee--e-ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 43 56777766544 55655554431 1111 1 11112334 3444566666654 45678888877654
No 44
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=87.51 E-value=13 Score=32.06 Aligned_cols=195 Identities=9% Similarity=0.079 Sum_probs=99.7
Q ss_pred cccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEE
Q 038188 108 PYDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHV 185 (384)
Q Consensus 108 s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (384)
..+|-|.+.+ .+.++.+||.|++...+.... ...++.+++..+ + ++.. ...+
T Consensus 22 ~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----------~~~~i~~~~dG~-l-~v~~-------------~~~l 75 (297)
T 3g4e_A 22 EVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-----------PVSSVALRQSGG-Y-VATI-------------GTKF 75 (297)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEECSS-----------CEEEEEEBTTSS-E-EEEE-------------TTEE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC-----------ceEEEEECCCCC-E-EEEE-------------CCeE
Confidence 3456565555 468899999998775543211 223456666443 2 2221 3467
Q ss_pred EEEEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecC------CCCccEEEEEEcCCceeee---ecCCC
Q 038188 186 AVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAG------DFHSKLILLFRISDEEFQE---IQRPC 254 (384)
Q Consensus 186 ~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~------~~~~~~il~fD~~~~~~~~---i~~P~ 254 (384)
.+|+..++.++.+.......+... ...+.+ +|.+|+-..... ......|..+|.....-.. +..|
T Consensus 76 ~~~d~~~g~~~~~~~~~~~~~~~~---~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~p- 151 (297)
T 3g4e_A 76 CALNWKEQSAVVLATVDNDKKNNR---FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDIS- 151 (297)
T ss_dssp EEEETTTTEEEEEEECCTTCSSEE---EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBE-
T ss_pred EEEECCCCcEEEEEecCCCCCCCC---CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccc-
Confidence 788888887765533211111100 112333 688655443211 0234678888876432221 1112
Q ss_pred CCCCCceeEEEE-CCe-EEEEEecCCCCeEEEEEEc-C-CceeEE---EEeCCCCccccceEEEeCCEEEEEEe-CCeEE
Q 038188 255 IPYTPFESLAPL-NGS-IALLHLDESNQYIEIWVMN-E-MNWIQQ---FAIGPFLGVKSPCGFWKNNAVLMESI-NGKLL 326 (384)
Q Consensus 255 ~~~~~~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l~-~-~~W~~~---~~i~~~~~~~~~~~~~~~~~il~~~~-~~~l~ 326 (384)
-.++.. +|+ |+++.... ..+.+|-++ + ...... ..+........-+.+..++.+++... .+.+.
T Consensus 152 ------ngi~~spdg~~lyv~~~~~--~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~ 223 (297)
T 3g4e_A 152 ------NGLDWSLDHKIFYYIDSLS--YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVI 223 (297)
T ss_dssp ------EEEEECTTSCEEEEEEGGG--TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEE
T ss_pred ------cceEEcCCCCEEEEecCCC--CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEE
Confidence 123333 454 66666544 666666664 2 333211 12211111222344555778877754 56799
Q ss_pred EEECCCCe-EEEEee
Q 038188 327 LYDLVVQE-MRDLGR 340 (384)
Q Consensus 327 ~yd~~t~~-~~~v~~ 340 (384)
.||+++++ ...+..
T Consensus 224 ~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 224 RLDPVTGKRLQTVKL 238 (297)
T ss_dssp EECTTTCCEEEEEEC
T ss_pred EEcCCCceEEEEEEC
Confidence 99999765 455544
No 45
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=87.47 E-value=12 Score=31.70 Aligned_cols=112 Identities=9% Similarity=-0.002 Sum_probs=72.4
Q ss_pred EECceEEEEEeecCCCCccEEEEEEcCCcee-eeecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEE
Q 038188 217 NLNGVFYWFVSRAGDFHSKLILLFRISDEEF-QEIQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQ 295 (384)
Q Consensus 217 ~~~G~lywl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~ 295 (384)
+.+|.||.-+.. .....|..+|+.+.+. ..+++|... ....+...+++|+++.... . .+|+.+-.+-.++
T Consensus 28 ~~~~~LyestG~---~g~S~v~~vD~~tgkv~~~~~l~~~~--fgeGi~~~~~~ly~ltw~~--~--~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 28 YLRGHLYESTGE---TGRSSVRKVDLETGRILQRAEVPPPY--FGAGIVAWRDRLIQLTWRN--H--EGFVYDLATLTPR 98 (243)
T ss_dssp EETTEEEEEECC---TTSCEEEEEETTTCCEEEEEECCTTC--CEEEEEEETTEEEEEESSS--S--EEEEEETTTTEEE
T ss_pred EECCEEEEECCC---CCCceEEEEECCCCCEEEEEeCCCCc--ceeEEEEeCCEEEEEEeeC--C--EEEEEECCcCcEE
Confidence 345777765542 2356899999988766 457887643 2234666789999986543 3 5666665455566
Q ss_pred EEeCCCCccccceEEEe-CCEEEEEEeCCeEEEEECCCCeE-EEEee
Q 038188 296 FAIGPFLGVKSPCGFWK-NNAVLMESINGKLLLYDLVVQEM-RDLGR 340 (384)
Q Consensus 296 ~~i~~~~~~~~~~~~~~-~~~il~~~~~~~l~~yd~~t~~~-~~v~~ 340 (384)
.++... ..+.++.. ++.+++..+..++..+|++|.+. +.+..
T Consensus 99 ~ti~~~---~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 99 ARFRYP---GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEECS---SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEeCC---CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 666432 23455554 45677777778899999999654 44443
No 46
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=87.10 E-value=15 Score=32.23 Aligned_cols=116 Identities=12% Similarity=0.087 Sum_probs=64.3
Q ss_pred Cce-EEEEEeecCCCCccEEEEEEcC--Cceeeee----cCCCCCC--CCceeEEEE-CCe-EEEEEecCCCCeEEEEEE
Q 038188 219 NGV-FYWFVSRAGDFHSKLILLFRIS--DEEFQEI----QRPCIPY--TPFESLAPL-NGS-IALLHLDESNQYIEIWVM 287 (384)
Q Consensus 219 ~G~-lywl~~~~~~~~~~~il~fD~~--~~~~~~i----~~P~~~~--~~~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l 287 (384)
+|. +|... ...+.|..+|+. +.++..+ ..|.... .....+... +|+ |++..... ..+.+|.+
T Consensus 197 dg~~l~v~~-----~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~--~~v~v~~~ 269 (347)
T 3hfq_A 197 DGQYAFLAG-----ELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY--NTLAVFAV 269 (347)
T ss_dssp TSSEEEEEE-----TTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT--TEEEEEEE
T ss_pred CCCEEEEEe-----CCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC--CEEEEEEE
Confidence 676 55443 234555555554 4555432 2233211 112234433 666 55555544 78999999
Q ss_pred cC-CceeEEEEeCCCCccccceEEEeCCE-EEEEEe-CCeEEEE--ECCCCeEEEEeec
Q 038188 288 NE-MNWIQQFAIGPFLGVKSPCGFWKNNA-VLMESI-NGKLLLY--DLVVQEMRDLGRF 341 (384)
Q Consensus 288 ~~-~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~-~~~l~~y--d~~t~~~~~v~~~ 341 (384)
+. ..+..+..+.........+.+.++++ +++... .+.+.+| |.++++++.+...
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~~ 328 (347)
T 3hfq_A 270 TADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQKD 328 (347)
T ss_dssp CGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred CCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecccc
Confidence 75 55666655543221234566666776 444443 3567777 8889998887653
No 47
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=86.83 E-value=16 Score=32.21 Aligned_cols=101 Identities=9% Similarity=0.050 Sum_probs=63.5
Q ss_pred CCccEEEEEEcCCceeee-ecC---CCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccc
Q 038188 232 FHSKLILLFRISDEEFQE-IQR---PCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSP 307 (384)
Q Consensus 232 ~~~~~il~fD~~~~~~~~-i~~---P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~ 307 (384)
.....|-.+|+++.++.. +.. +.........+...+++|+++.... ..+.+|-.+ +...+.++.... ...-
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~--~~v~viD~~--t~~~~~~i~~~~-~p~~ 88 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNS--HVIFAIDIN--TFKEVGRITGFT-SPRY 88 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGG--TEEEEEETT--TCCEEEEEECCS-SEEE
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCC--CEEEEEECc--ccEEEEEcCCCC-CCcE
Confidence 346789999999988754 211 1111122345666799999988754 566665444 344555553211 2334
Q ss_pred eEEEeCCEEEEEE-eCCeEEEEECCCCeEEE
Q 038188 308 CGFWKNNAVLMES-INGKLLLYDLVVQEMRD 337 (384)
Q Consensus 308 ~~~~~~~~il~~~-~~~~l~~yd~~t~~~~~ 337 (384)
+.+..++.+++.. .++.+..+|++|+++..
T Consensus 89 i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp EEEEETTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred EEEeCCCeEEEEECCCCeEEEEECCCCeEEE
Confidence 5554677887776 57789999999998753
No 48
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=86.62 E-value=14 Score=31.57 Aligned_cols=190 Identities=8% Similarity=0.031 Sum_probs=99.1
Q ss_pred CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCcccc
Q 038188 118 GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRV 197 (384)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 197 (384)
.+.++++||.++ ...+..+. ....++.+++.. .. ++.. .. ...+.+|+..++..+.
T Consensus 49 ~~~i~~~~~~~~-~~~~~~~~----------~~~~~l~~~~dg-~l-~v~~----~~-------~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMHPS----------HHQNGHCLNKQG-HL-IACS----HG-------LRRLERQREPGGEWES 104 (296)
T ss_dssp GTEEEEEETTSC-EEEEESSC----------SSEEEEEECTTC-CE-EEEE----TT-------TTEEEEECSTTCCEEE
T ss_pred CCEEEEEECCCC-eEEEECCC----------CCcceeeECCCC-cE-EEEe----cC-------CCeEEEEcCCCCcEEE
Confidence 468999999998 55543321 123456667643 22 1111 00 3567888887777654
Q ss_pred ccCCccccceeecCCcceEEE--CceEEEEEeec------------CCCCccEEEEEEcCCceeeeecCCCCCCCCceeE
Q 038188 198 SKGNIKWIPYVFESYYNNANL--NGVFYWFVSRA------------GDFHSKLILLFRISDEEFQEIQRPCIPYTPFESL 263 (384)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~------------~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l 263 (384)
........+. ..-..+.+ +|.+|+..... .......|..+|.. .++..+.-.. .....+
T Consensus 105 ~~~~~~~~~~---~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~---~~~~gi 177 (296)
T 3e5z_A 105 IADSFEGKKL---NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR---VKPNGL 177 (296)
T ss_dssp EECEETTEEC---CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC---SSEEEE
T ss_pred EeeccCCCCC---CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC---CCCccE
Confidence 4221001010 00112333 68776642100 01124589999987 5554432111 111233
Q ss_pred EEE-CCeEEEEEecCCCCeEEEEEEcC-Cce-eEEEEeCCCCccccceEEEeCCEEEEEEeCCeEEEEECCCCeEEEEee
Q 038188 264 APL-NGSIALLHLDESNQYIEIWVMNE-MNW-IQQFAIGPFLGVKSPCGFWKNNAVLMESINGKLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 264 ~~~-~G~L~l~~~~~~~~~l~iW~l~~-~~W-~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~~~~v~~ 340 (384)
+.. +|++.++.... ..+.+|-++. ... .....+........-+.+..++.+++.. .+.+..||++++.++.+..
T Consensus 178 ~~s~dg~~lv~~~~~--~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~~~~~~ 254 (296)
T 3e5z_A 178 AFLPSGNLLVSDTGD--NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDGDELGRVLT 254 (296)
T ss_dssp EECTTSCEEEEETTT--TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTSCEEEEEEC
T ss_pred EECCCCCEEEEeCCC--CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCCCEEEEEEC
Confidence 333 66665333333 6788888863 444 2222232111122345566678887777 7779999999888777765
Q ss_pred c
Q 038188 341 F 341 (384)
Q Consensus 341 ~ 341 (384)
.
T Consensus 255 ~ 255 (296)
T 3e5z_A 255 P 255 (296)
T ss_dssp S
T ss_pred C
Confidence 3
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=86.24 E-value=16 Score=32.17 Aligned_cols=99 Identities=6% Similarity=0.086 Sum_probs=57.7
Q ss_pred CccEEEEEEcCCceeeee-cCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEE
Q 038188 233 HSKLILLFRISDEEFQEI-QRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGF 310 (384)
Q Consensus 233 ~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 310 (384)
..+.|..+|+.+.++..+ .++... ..-..+... +|++.+....+ ..+.+|-++...+.....+........-+.+
T Consensus 28 ~d~~v~i~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~ 104 (372)
T 1k8k_C 28 NNHEVHIYEKSGNKWVQVHELKEHN-GQVTGVDWAPDSNRIVTCGTD--RNAYVWTLKGRTWKPTLVILRINRAARCVRW 104 (372)
T ss_dssp SSSEEEEEEEETTEEEEEEEEECCS-SCEEEEEEETTTTEEEEEETT--SCEEEEEEETTEEEEEEECCCCSSCEEEEEE
T ss_pred CCCEEEEEeCCCCcEEeeeeecCCC-CcccEEEEeCCCCEEEEEcCC--CeEEEEECCCCeeeeeEEeecCCCceeEEEE
Confidence 367788888888765433 222111 222233333 56666655555 7899999987666666554333322233444
Q ss_pred EeCCE-EEEEEeCCeEEEEECCCCe
Q 038188 311 WKNNA-VLMESINGKLLLYDLVVQE 334 (384)
Q Consensus 311 ~~~~~-il~~~~~~~l~~yd~~t~~ 334 (384)
.+++. ++....++.+.+||+++++
T Consensus 105 ~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 105 APNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp CTTSSEEEEEETTSSEEEEEEETTT
T ss_pred CCCCCEEEEEeCCCEEEEEEecCCC
Confidence 45554 4445667778899888875
No 50
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=86.12 E-value=17 Score=32.04 Aligned_cols=114 Identities=13% Similarity=0.078 Sum_probs=64.7
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeec----CCCCCCCCceeEEEE-CCe-EEEEEecCCCCeEEEEEEcC--C
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQ----RPCIPYTPFESLAPL-NGS-IALLHLDESNQYIEIWVMNE--M 290 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~----~P~~~~~~~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l~~--~ 290 (384)
+|...++.. ...+.|..||+.+.++..+. .|... .....+... +|+ |++.... ....+.||.++. .
T Consensus 221 dg~~l~v~~----~~~~~v~v~~~~~g~~~~~~~~~~~~~~~-~~~~~i~~spdg~~l~v~~~~-~~~~i~v~~~~~~~g 294 (361)
T 3scy_A 221 DGKFAYLIN----EIGGTVIAFRYADGMLDEIQTVAADTVNA-QGSGDIHLSPDGKYLYASNRL-KADGVAIFKVDETNG 294 (361)
T ss_dssp TSSEEEEEE----TTTCEEEEEEEETTEEEEEEEEESCSSCC-CCEEEEEECTTSSEEEEEECS-SSCEEEEEEECTTTC
T ss_pred CCCEEEEEc----CCCCeEEEEEecCCceEEeEEEecCCCCC-CCcccEEECCCCCEEEEECCC-CCCEEEEEEEcCCCC
Confidence 576434443 33677888998877665432 22211 122244443 676 4443433 137899999973 6
Q ss_pred ceeEEEEeCCCCccccceEEEeCCEE-EEEE-eCCeEEE--EECCCCeEEEEe
Q 038188 291 NWIQQFAIGPFLGVKSPCGFWKNNAV-LMES-INGKLLL--YDLVVQEMRDLG 339 (384)
Q Consensus 291 ~W~~~~~i~~~~~~~~~~~~~~~~~i-l~~~-~~~~l~~--yd~~t~~~~~v~ 339 (384)
.+..+..+.. .....-+.+.++++. ++.. ..+.+.+ +|+++++++.+.
T Consensus 295 ~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 295 TLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp CEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred cEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 6766666543 212344566667764 4444 3455555 688899887764
No 51
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=86.03 E-value=7.5 Score=35.81 Aligned_cols=109 Identities=11% Similarity=0.152 Sum_probs=63.9
Q ss_pred ECceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCe-EEEEEecCCCCeEEEEEEcC-Ccee-
Q 038188 218 LNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGS-IALLHLDESNQYIEIWVMNE-MNWI- 293 (384)
Q Consensus 218 ~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l~~-~~W~- 293 (384)
-+|.|||.. ...+.|..+|+++.....+..... ... ++.. +|. |++..... .. .||+++. ..|.
T Consensus 140 ~~g~lyv~d-----~~~~~I~~id~~~g~~~~~~~~~~--~~~--ia~~~~g~~l~~~d~~~-~~--~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 140 GNNTVLAYQ-----RDDPRVRLISVDDNKVTTVHPGFK--GGK--PAVTKDKQRVYSIGWEG-TH--TVYVYMKASGWAP 207 (409)
T ss_dssp STTEEEEEE-----TTTTEEEEEETTTTEEEEEEETCC--BCB--CEECTTSSEEEEEBSST-TC--EEEEEEGGGTTCE
T ss_pred CCCCEEEEe-----cCCCcEEEEECCCCEEEEeeccCC--CCc--eeEecCCCcEEEEecCC-Cc--eEEEEEcCCCcee
Confidence 368999986 346899999999887766533211 112 3332 444 44443322 12 6777765 4454
Q ss_pred -EEEEeCC-CCccccceEEEe-CCEEEEEEeCCeEEEEECCCCeEEEE
Q 038188 294 -QQFAIGP-FLGVKSPCGFWK-NNAVLMESINGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 294 -~~~~i~~-~~~~~~~~~~~~-~~~il~~~~~~~l~~yd~~t~~~~~v 338 (384)
....+.+ ...-..-+.+.+ ++.|++....+.++.||+++++...+
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 2222222 111233456666 67888866667899999998876655
No 52
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=85.96 E-value=3.5 Score=41.20 Aligned_cols=132 Identities=10% Similarity=0.014 Sum_probs=65.9
Q ss_pred eEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEE--ECCeEEEEEecCCCCeEEEEEEcC
Q 038188 215 NANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAP--LNGSIALLHLDESNQYIEIWVMNE 289 (384)
Q Consensus 215 ~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~--~~G~L~l~~~~~~~~~l~iW~l~~ 289 (384)
++.+ +|.|||... .....|..+++....-..+-.. .. .....|+. .+|+||++.... ..|.+.-++.
T Consensus 500 giavDp~~g~ly~td~----~~~~~I~~~~~dG~~~~~l~~~-~l-~~PnGlavd~~~~~LY~aD~~~--~~I~~~d~dG 571 (699)
T 1n7d_A 500 AIVVDPVHGFMYWTDW----GTPAKIKKGGLNGVDIYSLVTE-NI-QWPNGITLDLLSGRLYWVDSKL--HSISSIDVNG 571 (699)
T ss_dssp CEECCSSSSCCEECCC----SSSCCEEBCCSSSCCCCEESCS-SC-SSCCCEEECTTTCCEEEEETTT--TEEEEECSSS
T ss_pred eEEEccCCCcEEEccc----CCCCeEEEEeCCCCCeeEEEeC-CC-CCccEEEEeccCCEEEEEecCC--CeEEEEccCC
Confidence 4554 689999763 2236788888865433332110 00 11113444 367898887543 5554444443
Q ss_pred CceeEEEEeCCCCccccceEEEe-CCEEEEEEe-CCeEEEEECCCCeEEEEeeccCCCCcceEEEEEEeccc
Q 038188 290 MNWIQQFAIGPFLGVKSPCGFWK-NNAVLMESI-NGKLLLYDLVVQEMRDLGRFSSGELGAAILIYCYKESL 359 (384)
Q Consensus 290 ~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~~-~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~~~~y~~sL 359 (384)
. -.++. +.....+..|.++.- ++.|++... .+.|..+|..+++..++-..+.. ....+.+|.+..
T Consensus 572 ~-~~~~~-~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~---~P~~i~v~~~~~ 638 (699)
T 1n7d_A 572 G-NRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLL---SPEDMVLFHQLT 638 (699)
T ss_dssp S-CCEEE-CCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCS---SCCCCCBCSSSS
T ss_pred C-ceEEE-EecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCC---CCcEEEEeCccc
Confidence 1 11111 111112345555442 456766643 46799999988765443222222 223355565544
No 53
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=85.11 E-value=18 Score=31.15 Aligned_cols=111 Identities=19% Similarity=0.024 Sum_probs=69.3
Q ss_pred ECceEEEEEeecCCCCccEEEEEEcCCcee-eeecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEE
Q 038188 218 LNGVFYWFVSRAGDFHSKLILLFRISDEEF-QEIQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQF 296 (384)
Q Consensus 218 ~~G~lywl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~ 296 (384)
.+|.||--+.. .....|..+|+++.+. ..+++|... ....+...+++|+++.... . .+|+.+-.+-.++.
T Consensus 51 ~~~~LyestG~---~g~S~v~~vD~~Tgkv~~~~~l~~~~--FgeGit~~g~~ly~ltw~~--~--~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 51 RNGYFYESTGL---NGRSSIRKVDIESGKTLQQIELGKRY--FGEGISDWKDKIVGLTWKN--G--LGFVWNIRNLRQVR 121 (262)
T ss_dssp ETTEEEEEEEE---TTEEEEEEECTTTCCEEEEEECCTTC--CEEEEEEETTEEEEEESSS--S--EEEEEETTTCCEEE
T ss_pred ECCEEEEECCC---CCCceEEEEECCCCcEEEEEecCCcc--ceeEEEEeCCEEEEEEeeC--C--EEEEEECccCcEEE
Confidence 37778776652 2245899999988776 457776532 2234667789999986544 3 55666654445555
Q ss_pred EeCCCCccccceEEEeC-CEEEEEEeCCeEEEEECCCCeE-EEEee
Q 038188 297 AIGPFLGVKSPCGFWKN-NAVLMESINGKLLLYDLVVQEM-RDLGR 340 (384)
Q Consensus 297 ~i~~~~~~~~~~~~~~~-~~il~~~~~~~l~~yd~~t~~~-~~v~~ 340 (384)
+|.... .+.++..+ +.+++..+...+..+|++|.+. +.+..
T Consensus 122 ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 122 SFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 654211 33444444 4566666677899999998654 44443
No 54
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=85.09 E-value=21 Score=31.95 Aligned_cols=210 Identities=9% Similarity=-0.045 Sum_probs=106.7
Q ss_pred ccccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccE
Q 038188 107 GPYDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAH 184 (384)
Q Consensus 107 ~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (384)
+..+|.|.+.+ .+.++.+++.++....+..... ....++++|+..+...+.-. . ...
T Consensus 81 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~---------~~p~glavd~~~g~ly~~d~----~--------~~~ 139 (349)
T 3v64_C 81 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL---------ESPGGLAVDWVHDKLYWTDS----G--------TSR 139 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---------SCCCEEEEETTTTEEEEEET----T--------TTE
T ss_pred eccccEEEEEeccCCceEEEecCCCCceEEEeCCC---------CCccEEEEecCCCeEEEEcC----C--------CCe
Confidence 34677777776 3578888887766544422221 12345677765543222110 0 356
Q ss_pred EEEEEcCCCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCce
Q 038188 185 VAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFE 261 (384)
Q Consensus 185 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~ 261 (384)
+++++.....-+.+.......| .++.+ +|.|||... .....|..+|++...-..+- .... ...-
T Consensus 140 I~~~~~dG~~~~~l~~~~l~~P-------~~iavdp~~g~ly~td~----~~~~~I~r~~~dG~~~~~~~-~~~~-~~Pn 206 (349)
T 3v64_C 140 IEVANLDGAHRKVLLWQSLEKP-------RAIALHPMEGTIYWTDW----GNTPRIEASSMDGSGRRIIA-DTHL-FWPN 206 (349)
T ss_dssp EEEEETTSCSCEEEECTTCSCE-------EEEEEETTTTEEEEEEC----SSSCEEEEEETTSCSCEESC-CSSC-SCEE
T ss_pred EEEEcCCCCceEEEEeCCCCCc-------ceEEEecCcCeEEEecc----CCCCEEEEEeCCCCCcEEEE-ECCC-CCcc
Confidence 7777765443222111000111 23443 589999874 22488999999765443331 1111 1122
Q ss_pred eEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEE-eCCEEEEEEe-CCeEEEEECCCC-eEE
Q 038188 262 SLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFW-KNNAVLMESI-NGKLLLYDLVVQ-EMR 336 (384)
Q Consensus 262 ~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~~~il~~~~-~~~l~~yd~~t~-~~~ 336 (384)
.|+.. +|+||++.... ..+...-++. .-.+.. +. . .+..|.++. .++.+++... .+.+..+|..++ ..+
T Consensus 207 Gla~d~~~~~lY~aD~~~--~~I~~~~~dG-~~~~~~-~~-~-~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~ 280 (349)
T 3v64_C 207 GLTIDYAGRRMYWVDAKH--HVIERANLDG-SHRKAV-IS-Q-GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQE 280 (349)
T ss_dssp EEEEETTTTEEEEEETTT--TEEEEEETTS-CSCEEE-EC-S-SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred eEEEeCCCCEEEEEECCC--CEEEEEeCCC-CceEEE-Ee-C-CCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccE
Confidence 35543 78899887654 5555554443 111111 11 1 134555543 3567777754 567888985444 444
Q ss_pred EEeeccCCCCcceEEEEEEeccce
Q 038188 337 DLGRFSSGELGAAILIYCYKESLI 360 (384)
Q Consensus 337 ~v~~~~~~~~~~~~~~~~y~~sL~ 360 (384)
.+.. +.. ....+.+|.++.-
T Consensus 281 ~i~~-~~~---~p~gi~v~~~~~q 300 (349)
T 3v64_C 281 IIRN-KLH---FPMDIHTLHPQRQ 300 (349)
T ss_dssp EEEC-SCS---CCCCEEEECGGGS
T ss_pred Eecc-CCC---CCceEEEEccccC
Confidence 5443 222 2334666766543
No 55
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=85.08 E-value=19 Score=31.57 Aligned_cols=185 Identities=8% Similarity=-0.029 Sum_probs=88.1
Q ss_pred eEEEeeCCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcC
Q 038188 112 IFCLCDGGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSS 191 (384)
Q Consensus 112 Ll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~ 191 (384)
+|++.+...+.+.++.+++...+-+.. ....++.+|+..+.-.+.-. . ...+..++..
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~~~----------~~p~g~~~d~~~~~ly~~D~-----~-------~~~I~~~~~~ 60 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIPNL----------RNVVALDTEVASNRIYWSDL-----S-------QRMICSTQLD 60 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEECSC----------SSEEEEEEETTTTEEEEEET-----T-------TTEEEEEEC-
T ss_pred EEEEECCCeEEEEECCCcceEehhcCC----------CceEEEEEEeCCCEEEEEEC-----C-------CCcEEEEECC
Confidence 466666778888888887665442111 23456777775543222111 0 3456666665
Q ss_pred CC---cc-ccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEE
Q 038188 192 TD---SW-RVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLA 264 (384)
Q Consensus 192 t~---~W-~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~ 264 (384)
+. +- +.+-.. . ... ..++.+ +|.+||.. ...+.|..+|++...-..+--. .. .....++
T Consensus 61 g~~~~~~~~~~~~~--~----~~~-p~glavd~~~~~ly~~d-----~~~~~I~~~~~~g~~~~~~~~~-~~-~~P~~ia 126 (316)
T 1ijq_A 61 RAHGVSSYDTVISR--D----IQA-PDGLAVDWIHSNIYWTD-----SVLGTVSVADTKGVKRKTLFRE-NG-SKPRAIV 126 (316)
T ss_dssp -------CEEEECS--S----CSC-CCEEEEETTTTEEEEEE-----TTTTEEEEEETTSSSEEEEEEC-TT-CCEEEEE
T ss_pred CCCCCcccEEEEeC--C----CCC-cCEEEEeecCCeEEEEE-----CCCCEEEEEeCCCCceEEEEEC-CC-CCcceEE
Confidence 41 11 111000 0 001 123443 68999986 4477899999986544433111 11 1223444
Q ss_pred E--ECCeEEEEEecCCCCeEEEEEEcC-CceeEEEEeCCCCccccceE--EEe-CCEEEEEEe-CCeEEEEECCCCeEEE
Q 038188 265 P--LNGSIALLHLDESNQYIEIWVMNE-MNWIQQFAIGPFLGVKSPCG--FWK-NNAVLMESI-NGKLLLYDLVVQEMRD 337 (384)
Q Consensus 265 ~--~~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~--~~~-~~~il~~~~-~~~l~~yd~~t~~~~~ 337 (384)
. .+|.|++..... .. .|++.+- .+-.++. +. . .+..|-+ +.. ++.|++... .+.+..+|+++...+.
T Consensus 127 vdp~~g~ly~~d~~~-~~--~I~~~~~dG~~~~~~-~~-~-~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~ 200 (316)
T 1ijq_A 127 VDPVHGFMYWTDWGT-PA--KIKKGGLNGVDIYSL-VT-E-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 200 (316)
T ss_dssp EETTTTEEEEEECSS-SC--EEEEEETTSCCEEEE-EC-S-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred eCCCCCEEEEEccCC-CC--eEEEEcCCCCCeEEE-EE-C-CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEE
Confidence 4 367788775432 12 3454432 2222211 11 1 1233433 332 456665543 3457777776654444
Q ss_pred E
Q 038188 338 L 338 (384)
Q Consensus 338 v 338 (384)
+
T Consensus 201 ~ 201 (316)
T 1ijq_A 201 I 201 (316)
T ss_dssp E
T ss_pred E
Confidence 4
No 56
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=84.63 E-value=18 Score=30.97 Aligned_cols=194 Identities=9% Similarity=-0.010 Sum_probs=90.9
Q ss_pred CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCcccc
Q 038188 118 GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRV 197 (384)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 197 (384)
.+.++++||.+++...+..+... +. .....++.+|+..+..-| .- . ...+.+|+.. +..+.
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~---~~--~~~~~~i~~~~~~g~l~v-~~-----~-------~~~l~~~d~~-g~~~~ 105 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVN---GY--GGIPAGCQCDRDANQLFV-AD-----M-------RLGLLVVQTD-GTFEE 105 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEET---TE--ECCEEEEEECSSSSEEEE-EE-----T-------TTEEEEEETT-SCEEE
T ss_pred CCEEEEEeCCCCcEEEEEecccC---CC--CCCCceEEEecCCCcEEE-EE-----C-------CCCEEEEeCC-CCEEE
Confidence 46799999999988765431100 00 012345666654232111 11 0 2356777777 65543
Q ss_pred c-cCCccccceeecCCcceEEE--CceEEEEEeec----------CCCCccEEEEEEcCCceeeeecCCCCCCCCceeEE
Q 038188 198 S-KGNIKWIPYVFESYYNNANL--NGVFYWFVSRA----------GDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLA 264 (384)
Q Consensus 198 ~-~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~----------~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~ 264 (384)
. .......+. ..-..+.+ +|.+|+..... .......|..+|.. .++..+.-.. .....++
T Consensus 106 ~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~---~~~~~i~ 178 (314)
T 1pjx_A 106 IAKKDSEGRRM---QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF---QFPNGIA 178 (314)
T ss_dssp CCSBCTTSCBC---BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE---SSEEEEE
T ss_pred EEeccCCCccc---cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC---CCcceEE
Confidence 3 211101110 01123433 57776554210 00112689999987 5554331100 0111233
Q ss_pred EE-----CC-eEEEEEecCCCCeEEEEEEcC-CceeEEEEeCCCC----ccccceEEEeCCEEEEEE-eCCeEEEEECCC
Q 038188 265 PL-----NG-SIALLHLDESNQYIEIWVMNE-MNWIQQFAIGPFL----GVKSPCGFWKNNAVLMES-INGKLLLYDLVV 332 (384)
Q Consensus 265 ~~-----~G-~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~----~~~~~~~~~~~~~il~~~-~~~~l~~yd~~t 332 (384)
.. +| .|++..... ..+.+|-++. ........+...+ ....-+.+.+++.+++.. ..+.+..||+++
T Consensus 179 ~~~~~d~dg~~l~v~~~~~--~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~ 256 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAETPT--KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG 256 (314)
T ss_dssp EEECTTSCEEEEEEEETTT--TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC
T ss_pred EecccCCCCCEEEEEECCC--CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 33 34 355555433 6777776652 3332221111111 112234445577887765 456799999995
Q ss_pred Ce-EEEEe
Q 038188 333 QE-MRDLG 339 (384)
Q Consensus 333 ~~-~~~v~ 339 (384)
++ .+.+.
T Consensus 257 g~~~~~~~ 264 (314)
T 1pjx_A 257 GQPKMRIR 264 (314)
T ss_dssp BSCSEEEE
T ss_pred CcEeEEEe
Confidence 44 34443
No 57
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=84.26 E-value=18 Score=30.54 Aligned_cols=195 Identities=8% Similarity=-0.055 Sum_probs=94.2
Q ss_pred eEEEeeCCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcC
Q 038188 112 IFCLCDGGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSS 191 (384)
Q Consensus 112 Ll~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~ 191 (384)
.|++.+...++.++.-++....+-..+.. ........++.+|+..+...+.-. . ...+.+|+..
T Consensus 3 ~l~~~~~~~I~~~~~~g~~~~~~~~~~~~----~~~~~~~~gi~~d~~~~~ly~~d~----~--------~~~I~~~~~~ 66 (267)
T 1npe_A 3 HLLFAQTGKIERLPLERNTMKKTEAKAFL----HIPAKVIIGLAFDCVDKVVYWTDI----S--------EPSIGRASLH 66 (267)
T ss_dssp EEEEEEEEEEEEEEESSSCBCGGGCEEEE----EEEEEEEEEEEEETTTTEEEEEET----T--------TTEEEEEESS
T ss_pred EEEEEcCCeEEEEEecCcccccccceeee----cCCCCcEEEEEEecCCCEEEEEEC----C--------CCEEEEEecC
Confidence 34455555677777766544322100000 000123456777775443222211 0 3567778776
Q ss_pred CCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE--
Q 038188 192 TDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-- 266 (384)
Q Consensus 192 t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-- 266 (384)
++.-+.+... .+ ....++.+ +|.+||.. ...+.|..+|++...-+.+- +... .....++..
T Consensus 67 g~~~~~~~~~--~~-----~~p~~ia~d~~~~~lyv~d-----~~~~~I~~~~~~g~~~~~~~-~~~~-~~P~~i~vd~~ 132 (267)
T 1npe_A 67 GGEPTTIIRQ--DL-----GSPEGIALDHLGRTIFWTD-----SQLDRIEVAKMDGTQRRVLF-DTGL-VNPRGIVTDPV 132 (267)
T ss_dssp SCCCEEEECT--TC-----CCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSCEEEE-CSSC-SSEEEEEEETT
T ss_pred CCCcEEEEEC--CC-----CCccEEEEEecCCeEEEEE-----CCCCEEEEEEcCCCCEEEEE-ECCC-CCccEEEEeeC
Confidence 5432221100 10 01123444 57899987 34678999999765433331 1111 122344443
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEe-CCEEEEEEe-CCeEEEEECCCCeEEEE
Q 038188 267 NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWK-NNAVLMESI-NGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~~-~~~l~~yd~~t~~~~~v 338 (384)
+|.|++.........+....++. .-.+...-.... ....+++.. ++.+++... .+.+..+|++++..+.+
T Consensus 133 ~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~-~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 133 RGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLG-LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp TTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred CCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCC-CCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 67888876542224554444443 222211101111 223344554 467766654 46799999987665544
No 58
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=84.17 E-value=18 Score=30.58 Aligned_cols=109 Identities=9% Similarity=0.035 Sum_probs=60.3
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFA 297 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~ 297 (384)
+|.+|+.. ...+.|..||.. .++..+.+|... .....+... +|.|++..... ..+..+-.+ ..+.. ..
T Consensus 30 ~g~l~v~~-----~~~~~v~~~~~~-~~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~--~~v~~~d~~-g~~~~-~~ 98 (300)
T 2qc5_A 30 DGKVWFTQ-----HKANKISSLDQS-GRIKEFEVPTPD-AKVMCLIVSSLGDIWFTENGA--NKIGKLSKK-GGFTE-YP 98 (300)
T ss_dssp TSCEEEEE-----TTTTEEEEECTT-SCEEEEECSSTT-CCEEEEEECTTSCEEEEETTT--TEEEEECTT-SCEEE-EE
T ss_pred CCCEEEEc-----CCCCeEEEECCC-CceEEEECCCCC-CcceeEEECCCCCEEEEecCC--CeEEEECCC-CCeEE-ec
Confidence 58877654 346889999998 777777666432 222334443 67787765433 344333222 34322 22
Q ss_pred eCCCCccccceEEEeCCEEEEEEe-CCeEEEEECCCCeEEEEe
Q 038188 298 IGPFLGVKSPCGFWKNNAVLMESI-NGKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 298 i~~~~~~~~~~~~~~~~~il~~~~-~~~l~~yd~~t~~~~~v~ 339 (384)
+........-+.+.+++.+++... .+.++.||++ +++..+.
T Consensus 99 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~ 140 (300)
T 2qc5_A 99 LPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD 140 (300)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred CCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc
Confidence 221111122233445677777654 5679999998 6665543
No 59
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=83.92 E-value=26 Score=32.07 Aligned_cols=128 Identities=9% Similarity=-0.003 Sum_probs=69.8
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE--CCeEEEEEecCCCCeEEEEEEcC-CceeEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL--NGSIALLHLDESNQYIEIWVMNE-MNWIQQ 295 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~ 295 (384)
+|.|||... .....|..+|++...-..+-.. .. .....|+.. +|+||++.... ..+...-++. ...+.
T Consensus 213 ~g~ly~td~----~~~~~I~~~~~dG~~~~~~~~~-~l-~~P~glavd~~~~~lY~aD~~~--~~I~~~d~dG~~~~~~- 283 (400)
T 3p5b_L 213 HGFMYWTDW----GTPAKIKKGGLNGVDIYSLVTE-NI-QWPNGITLDLLSGRLYWVDSKL--HSISSIDVNGGNRKTI- 283 (400)
T ss_dssp TTEEEEEEC----SSSCCEEEEETTSCSCEEEECS-SC-SCEEEEEEETTTTEEEEEETTT--TEEEEEETTSCCCEEE-
T ss_pred cCeEEEEeC----CCCCEEEEEeCCCCccEEEEEC-CC-CceEEEEEEeCCCEEEEEECCC--CEEEEEeCCCCccEEE-
Confidence 689999864 2246899999876543332111 11 122245544 77899986544 4444444443 22222
Q ss_pred EEeCCCCccccceEEE-eCCEEEEEEe-CCeEEEEECCCCe-EEEEeeccCCCCcceEEEEEEecccee
Q 038188 296 FAIGPFLGVKSPCGFW-KNNAVLMESI-NGKLLLYDLVVQE-MRDLGRFSSGELGAAILIYCYKESLIR 361 (384)
Q Consensus 296 ~~i~~~~~~~~~~~~~-~~~~il~~~~-~~~l~~yd~~t~~-~~~v~~~~~~~~~~~~~~~~y~~sL~~ 361 (384)
.. ....+..|.++. .++.|++... .+.+..+|..+++ .+.+. .+.. ..+.+.+|.+..-+
T Consensus 284 ~~--~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~-~~~~---~p~~i~v~~~~~qp 346 (400)
T 3p5b_L 284 LE--DEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA-ENLL---SPEDMVLFHNLTQP 346 (400)
T ss_dssp EE--CSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE-CSCS---CEEEEEEESGGGSC
T ss_pred Ee--CCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe-cCCC---CCceEEEEeeccCC
Confidence 11 111245676654 3567777754 4568999966654 44443 2332 35567778776543
No 60
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=83.77 E-value=18 Score=30.23 Aligned_cols=195 Identities=15% Similarity=0.056 Sum_probs=92.1
Q ss_pred cce-EEEeeCCeEEEEccCc-ccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEE
Q 038188 110 DGI-FCLCDGGLITLWNPAT-KECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAV 187 (384)
Q Consensus 110 ~GL-l~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (384)
+|- +.+...+.++++|..+ ++...+...... .....+.+.|. +.+-++.. . ... ....+.+
T Consensus 52 dg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~spd-g~~l~~~~-~--~~~-----~~~~l~~ 114 (297)
T 2ojh_A 52 DGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT--------ICNNDHGISPD-GALYAISD-K--VEF-----GKSAIYL 114 (297)
T ss_dssp TSSEEEEEETTEEEEEESSSCCSCEECCCTTCC--------CBCSCCEECTT-SSEEEEEE-C--TTT-----SSCEEEE
T ss_pred CCCEEEEEcCCeEEEEeCCCCCCceEecccccc--------ccccceEECCC-CCEEEEEE-e--CCC-----CcceEEE
Confidence 443 4444467899999999 887766543211 11112333342 22222211 0 000 1466667
Q ss_pred EEcCCCccccccCCccccceeecCCcceEEECce-EEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE
Q 038188 188 YTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGV-FYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL 266 (384)
Q Consensus 188 yss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 266 (384)
++..++.-+.+..... ... ....-+|. +++.... .....|..+|+.+.....+.... .....+...
T Consensus 115 ~~~~~~~~~~~~~~~~--~~~-----~~~spdg~~l~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~s 181 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNLP--SYW-----HGWSPDGKSFTYCGIR---DQVFDIYSMDIDSGVETRLTHGE---GRNDGPDYS 181 (297)
T ss_dssp EETTCCCCEECCSSSS--EEE-----EEECTTSSEEEEEEEE---TTEEEEEEEETTTCCEEECCCSS---SCEEEEEEC
T ss_pred EECCCCceEEeecCCC--ccc-----eEECCCCCEEEEEECC---CCceEEEEEECCCCcceEcccCC---CccccceEC
Confidence 7766665444332210 010 01111454 4433322 22346777777766655443221 112233332
Q ss_pred -CCeEEEEEe-cCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCE-EEEEEeC-----------CeEEEEEC
Q 038188 267 -NGSIALLHL-DESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNA-VLMESIN-----------GKLLLYDL 330 (384)
Q Consensus 267 -~G~L~l~~~-~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~-----------~~l~~yd~ 330 (384)
+|+..++.. .. ..+.||.++. .. ...+.........+.+.+++. |++...+ ..++.||+
T Consensus 182 ~dg~~l~~~~~~~--~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 182 PDGRWIYFNSSRT--GQMQIWRVRVDGSS---VERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp TTSSEEEEEECTT--SSCEEEEEETTSSC---EEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred CCCCEEEEEecCC--CCccEEEECCCCCC---cEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEec
Confidence 566444333 33 6789999873 22 222322221122344445554 4444432 45999999
Q ss_pred CCCeEEEEe
Q 038188 331 VVQEMRDLG 339 (384)
Q Consensus 331 ~t~~~~~v~ 339 (384)
++++.+.+.
T Consensus 257 ~~~~~~~~~ 265 (297)
T 2ojh_A 257 DGGNVETLF 265 (297)
T ss_dssp TSCSCEEEE
T ss_pred CCCCceeee
Confidence 998766554
No 61
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=83.25 E-value=20 Score=30.31 Aligned_cols=109 Identities=8% Similarity=0.013 Sum_probs=62.0
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFA 297 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~ 297 (384)
+|.+|+.. .....|..+|. +.++..+..|... .....+... +|.|++..... ..+.+|-. +..... ..
T Consensus 151 ~g~l~v~~-----~~~~~i~~~~~-~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~--~~i~~~~~-~g~~~~-~~ 219 (299)
T 2z2n_A 151 DNALWFTE-----NQNNAIGRITE-SGDITEFKIPTPA-SGPVGITKGNDDALWFVEIIG--NKIGRITT-SGEITE-FK 219 (299)
T ss_dssp TSCEEEEE-----TTTTEEEEECT-TCCEEEEECSSTT-CCEEEEEECTTSSEEEEETTT--TEEEEECT-TCCEEE-EE
T ss_pred CCCEEEEe-----CCCCEEEEEcC-CCcEEEeeCCCCC-CcceeEEECCCCCEEEEccCC--ceEEEECC-CCcEEE-EE
Confidence 57776644 33578999999 7777766555332 122234443 67887765433 45555544 233322 22
Q ss_pred eCCCCccccc--eEEEeCCEEEEEE-eCCeEEEEECCCCeEEEEeec
Q 038188 298 IGPFLGVKSP--CGFWKNNAVLMES-INGKLLLYDLVVQEMRDLGRF 341 (384)
Q Consensus 298 i~~~~~~~~~--~~~~~~~~il~~~-~~~~l~~yd~~t~~~~~v~~~ 341 (384)
. +.. ...| +.+.+++.+++.. ..+.+..||+ +++++.+...
T Consensus 220 ~-~~~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~ 263 (299)
T 2z2n_A 220 I-PTP-NARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQ 263 (299)
T ss_dssp C-SST-TCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECS
T ss_pred C-CCC-CCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCC
Confidence 2 111 2334 4444567777765 4567999999 5677666543
No 62
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=83.17 E-value=14 Score=33.98 Aligned_cols=195 Identities=12% Similarity=0.046 Sum_probs=89.2
Q ss_pred ccc-eEEEee-CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEE
Q 038188 109 YDG-IFCLCD-GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVA 186 (384)
Q Consensus 109 ~~G-Ll~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (384)
.++ +|.... ++.+.|||..+++...+-.... +. .....+.|.|..+.+-+.+ .. .-.+.
T Consensus 130 ~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~g-----H~--~~V~~l~f~p~~~~~l~s~-----s~-------D~~v~ 190 (435)
T 4e54_B 130 THPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIG-----AG--GSITGLKFNPLNTNQFYAS-----SM-------EGTTR 190 (435)
T ss_dssp SCTTCEEEEETTSCEEEECSSCCSCCEEECCCS-----SS--CCCCEEEECSSCTTEEEEE-----CS-------SSCEE
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCceeEEEccC-----CC--CCEEEEEEeCCCCCEEEEE-----eC-------CCEEE
Confidence 344 443333 4688999999887544322111 11 2334456666544442211 11 34577
Q ss_pred EEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE
Q 038188 187 VYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL 266 (384)
Q Consensus 187 vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 266 (384)
+++.+++.-+........ .. ....-...-+|.+.... ...+.|..+|+.+.....+.... ..-..+...
T Consensus 191 iwd~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~l~~g-----~~dg~i~~wd~~~~~~~~~~~h~---~~v~~v~~~ 259 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTI-NI--WFCSLDVSASSRMVVTG-----DNVGNVILLNMDGKELWNLRMHK---KKVTHVALN 259 (435)
T ss_dssp EEETTSCEEEEEECCSSC-SC--CCCCEEEETTTTEEEEE-----CSSSBEEEEESSSCBCCCSBCCS---SCEEEEEEC
T ss_pred EeeccCCceeEEeccCCC-Cc--cEEEEEECCCCCEEEEE-----eCCCcEeeeccCcceeEEEeccc---ceEEeeeec
Confidence 777776654432211000 00 00001112245544433 33667888888765443332211 111122222
Q ss_pred -CCe-EEEEEecCCCCeEEEEEEcCCceeEEE-EeCCCCccccceEEEeCCEEEE-EEeCCeEEEEECCCCeE
Q 038188 267 -NGS-IALLHLDESNQYIEIWVMNEMNWIQQF-AIGPFLGVKSPCGFWKNNAVLM-ESINGKLLLYDLVVQEM 335 (384)
Q Consensus 267 -~G~-L~l~~~~~~~~~l~iW~l~~~~W~~~~-~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~t~~~ 335 (384)
+|. +.+....+ ..+.||-+....-.... ....+..-..-+.+..++..++ ...++.+.+||+.+.+.
T Consensus 260 p~~~~~~~s~s~d--~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 260 PCCDWFLATASVD--QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp TTCSSEEEEEETT--SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred CCCceEEEEecCc--ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 343 44444444 78899987651100000 0001111111233344555544 45677899999988653
No 63
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=82.44 E-value=23 Score=30.47 Aligned_cols=110 Identities=7% Similarity=-0.046 Sum_probs=69.0
Q ss_pred ceEEEEEeecCCCCccEEEEEEcCCcee-eeecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEe
Q 038188 220 GVFYWFVSRAGDFHSKLILLFRISDEEF-QEIQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAI 298 (384)
Q Consensus 220 G~lywl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i 298 (384)
|.||--+.. .....|..+|+.+.+- ..+++|... ....+...+++|+++.... . .+++.+-.+-..+.+|
T Consensus 32 g~Lyvstg~---~~~s~v~~iD~~tg~v~~~i~l~~~~--fgeGi~~~g~~lyv~t~~~--~--~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 32 DTLFESTGL---YGRSSVRQVALQTGKVENIHKMDDSY--FGEGLTLLNEKLYQVVWLK--N--IGFIYDRRTLSNIKNF 102 (266)
T ss_dssp TEEEEEECS---TTTCEEEEEETTTCCEEEEEECCTTC--CEEEEEEETTEEEEEETTC--S--EEEEEETTTTEEEEEE
T ss_pred CeEEEECCC---CCCCEEEEEECCCCCEEEEEecCCCc--ceEEEEEeCCEEEEEEecC--C--EEEEEECCCCcEEEEE
Confidence 677776531 2367999999987765 456776532 2224555688898886543 3 3566665455566666
Q ss_pred CCCCccccceEEEeC-CEEEEEEeCCeEEEEECCCCe-EEEEee
Q 038188 299 GPFLGVKSPCGFWKN-NAVLMESINGKLLLYDLVVQE-MRDLGR 340 (384)
Q Consensus 299 ~~~~~~~~~~~~~~~-~~il~~~~~~~l~~yd~~t~~-~~~v~~ 340 (384)
... ...+.++..+ +.+++..+.+.+..+|++|.+ .+.+..
T Consensus 103 ~~g--~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 103 THQ--MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp ECC--SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ECC--CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 422 1234555544 557777667789999999966 444443
No 64
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=81.90 E-value=46 Score=33.61 Aligned_cols=113 Identities=9% Similarity=0.023 Sum_probs=61.7
Q ss_pred eEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEE--ECCeEEEEEecCCCCeEEEEEEcC
Q 038188 215 NANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAP--LNGSIALLHLDESNQYIEIWVMNE 289 (384)
Q Consensus 215 ~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~--~~G~L~l~~~~~~~~~l~iW~l~~ 289 (384)
++.+ +|.|||.. ...+.|.++|+....-..+-.. .. ..-..|++ .+|.||+..... ...+.+--|+.
T Consensus 475 GLAvD~~~~~LY~tD-----~~~~~I~v~~ldG~~~~~l~~~-~l-~~P~gIaVDp~~g~LYwtD~g~-~~~I~~~~~dG 546 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTD-----SVLGTVSVADTKGVKRKTLFRE-NG-SKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNG 546 (791)
T ss_dssp EEEEETTTTEEEEEE-----TTTTEEEEEETTSSSEEEEEEC-TT-CCEEEEEEETTTTEEEEEECSS-SCEEEEEETTS
T ss_pred eeeeeecCCcEEEEe-----cCCCeEEEEeCCCCeEEEEEeC-CC-CCcceEEEecCCCCEEEecCCC-CCeEEEEecCC
Confidence 4555 46999987 4578999999986654443211 11 12234555 368888876532 13333333332
Q ss_pred CceeEEEEeCCCCccccceEEE---eCCEEEEEEe-CCeEEEEECCCCeEEEEe
Q 038188 290 MNWIQQFAIGPFLGVKSPCGFW---KNNAVLMESI-NGKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 290 ~~W~~~~~i~~~~~~~~~~~~~---~~~~il~~~~-~~~l~~yd~~t~~~~~v~ 339 (384)
+-.++. +. ..+..|.++. .++.|++... ...|..+|+.....+.+.
T Consensus 547 -~~~~~l-v~--~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 547 -VDIYSL-VT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp -CCEEEE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred -CceEEE-Ee--CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 211111 11 1234555443 3567777643 456888888776665554
No 65
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=81.80 E-value=20 Score=31.19 Aligned_cols=112 Identities=10% Similarity=0.034 Sum_probs=60.2
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcC-CceeEEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNE-MNWIQQF 296 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~ 296 (384)
+|.+||.. .....|..+|+.+.++..+..+.. ..-..+... +|+|++.........-.|++++. ..... .
T Consensus 55 ~g~l~~~~-----~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-~ 126 (333)
T 2dg1_A 55 QGQLFLLD-----VFEGNIFKINPETKEIKRPFVSHK--ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ-D 126 (333)
T ss_dssp TSCEEEEE-----TTTCEEEEECTTTCCEEEEEECSS--SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE-E
T ss_pred CCCEEEEE-----CCCCEEEEEeCCCCcEEEEeeCCC--CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE-E
Confidence 68888765 346789999999888776532111 122334443 67887765432111124455543 11111 1
Q ss_pred EeC-CCC-ccccceEEEeCCEEEEEEe-------CCeEEEEECCCCeEEEE
Q 038188 297 AIG-PFL-GVKSPCGFWKNNAVLMESI-------NGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 297 ~i~-~~~-~~~~~~~~~~~~~il~~~~-------~~~l~~yd~~t~~~~~v 338 (384)
.+. ... .....+.+.+++.+++... ...++.||.++++++.+
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 111 111 1122234455777777654 25699999988776654
No 66
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=81.55 E-value=17 Score=33.38 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=30.1
Q ss_pred CeEEEEEEcCCceeEEEEeC-CCC-ccccceEEEeCCEEEEEEeCCeEEEEECCCCeEEE
Q 038188 280 QYIEIWVMNEMNWIQQFAIG-PFL-GVKSPCGFWKNNAVLMESINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 280 ~~l~iW~l~~~~W~~~~~i~-~~~-~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~~~~ 337 (384)
..+.||-..... .+..+. +.. .+.....+.+++.++....++.+.+||+++++.++
T Consensus 378 ~~i~iwd~~~g~--~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 378 RTIDVFDGNSGK--MMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CCEEEECSSSCC--EEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC------
T ss_pred CEEEEEECCCCc--EEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 568888765422 223322 222 12222345667777777777889999999987653
No 67
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=81.45 E-value=27 Score=30.58 Aligned_cols=129 Identities=9% Similarity=0.021 Sum_probs=69.7
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQF 296 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~ 296 (384)
+|.|||... .....|..+|++...-..+-.. .. .....|+.. +|+||++.... ..+...-++. .-.++.
T Consensus 131 ~g~ly~~d~----~~~~~I~~~~~dG~~~~~~~~~-~~-~~P~gla~d~~~~~lY~~D~~~--~~I~~~d~dg-~~~~~~ 201 (316)
T 1ijq_A 131 HGFMYWTDW----GTPAKIKKGGLNGVDIYSLVTE-NI-QWPNGITLDLLSGRLYWVDSKL--HSISSIDVNG-GNRKTI 201 (316)
T ss_dssp TTEEEEEEC----SSSCEEEEEETTSCCEEEEECS-SC-SCEEEEEEETTTTEEEEEETTT--TEEEEEETTS-CSCEEE
T ss_pred CCEEEEEcc----CCCCeEEEEcCCCCCeEEEEEC-CC-CCceEEEEeccCCEEEEEECCC--CeEEEEecCC-CceEEE
Confidence 689999863 2237899999876544433111 11 122244544 67888877544 5555555543 222211
Q ss_pred EeCCCCccccceEEE-eCCEEEEEEe-CCeEEEEECCCCe-EEEEeeccCCCCcceEEEEEEecccee
Q 038188 297 AIGPFLGVKSPCGFW-KNNAVLMESI-NGKLLLYDLVVQE-MRDLGRFSSGELGAAILIYCYKESLIR 361 (384)
Q Consensus 297 ~i~~~~~~~~~~~~~-~~~~il~~~~-~~~l~~yd~~t~~-~~~v~~~~~~~~~~~~~~~~y~~sL~~ 361 (384)
+.....+..|.++. .++.+++... .+++..+|..+++ .+.+.. +.. ....+.+|.++.-+
T Consensus 202 -~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~-~~~---~p~~i~v~~~~~qp 264 (316)
T 1ijq_A 202 -LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE-NLL---SPEDMVLFHNLTQP 264 (316)
T ss_dssp -EECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEEC-SCS---CCCCEEEESGGGSC
T ss_pred -eecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEec-CCC---CceEEEEeccccCC
Confidence 11111234565543 3567777654 5679999987655 444432 222 23346677766533
No 68
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=81.23 E-value=26 Score=30.21 Aligned_cols=108 Identities=12% Similarity=-0.007 Sum_probs=67.5
Q ss_pred ECceEEEEEeecCCCCccEEEEEEcCCceee-eecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEE
Q 038188 218 LNGVFYWFVSRAGDFHSKLILLFRISDEEFQ-EIQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQF 296 (384)
Q Consensus 218 ~~G~lywl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~ 296 (384)
.+|.||.-+. ..+.|..+|+++.+.. .+ +|... ....+...+++|+++.... . .+|+.+-.+-.++.
T Consensus 63 ~~~~Ly~stG-----~~g~v~~iD~~Tgkv~~~~-l~~~~--FgeGit~~g~~Ly~ltw~~--~--~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 63 HQGHFFESTG-----HQGTLRQLSLESAQPVWME-RLGNI--FAEGLASDGERLYQLTWTE--G--LLFTWSGMPPQRER 130 (268)
T ss_dssp ETTEEEEEET-----TTTEEEECCSSCSSCSEEE-ECTTC--CEEEEEECSSCEEEEESSS--C--EEEEEETTTTEEEE
T ss_pred ECCEEEEEcC-----CCCEEEEEECCCCcEEeEE-CCCCc--ceeEEEEeCCEEEEEEccC--C--EEEEEECCcCcEEE
Confidence 3567776663 2445999999887664 45 66432 2234666788999986543 3 56666654555666
Q ss_pred EeCCCCccccceEEEe-CCEEEEEEeCCeEEEEECCCCeE-EEEee
Q 038188 297 AIGPFLGVKSPCGFWK-NNAVLMESINGKLLLYDLVVQEM-RDLGR 340 (384)
Q Consensus 297 ~i~~~~~~~~~~~~~~-~~~il~~~~~~~l~~yd~~t~~~-~~v~~ 340 (384)
+|... ..+.++.. ++.+++..+...+..+|++|.+. +.+..
T Consensus 131 ti~~~---~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 131 TTRYS---GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EEECS---SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEeCC---CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 66432 12344444 55677777678899999999654 44444
No 69
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=80.43 E-value=24 Score=29.39 Aligned_cols=190 Identities=10% Similarity=0.058 Sum_probs=91.5
Q ss_pred eeccccceEEE-ee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEeccccccccc
Q 038188 105 LLGPYDGIFCL-CD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYE 181 (384)
Q Consensus 105 ~~~s~~GLl~~-~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 181 (384)
+....+|-+.+ .+ .+.++++|+.++....++..... ...++.+|+.. .. ... . .
T Consensus 29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------~p~~i~~~~~g-~l--~v~-~--~-------- 85 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY---------QPQGLAVDGAG-TV--YVT-D--F-------- 85 (270)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCC---------SCCCEEECTTC-CE--EEE-E--T--------
T ss_pred eEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcC---------CcceeEECCCC-CE--EEE-c--C--------
Confidence 33344666655 43 46789999988776665432211 22345556532 21 111 1 0
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTP 259 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~ 259 (384)
...+.+|+..++.-..........| .++.+ +|.+|+.. ...+.|..+|..+.......... . ..
T Consensus 86 ~~~i~~~d~~~~~~~~~~~~~~~~p-------~~i~~~~~g~l~v~~-----~~~~~i~~~~~~~~~~~~~~~~~-~-~~ 151 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQTVLPFDGLNYP-------EGLAVDTQGAVYVAD-----RGNNRVVKLAAGSKTQTVLPFTG-L-ND 151 (270)
T ss_dssp TTEEEEECTTCSCCEECCCCSCSSE-------EEEEECTTCCEEEEE-----GGGTEEEEECTTCCSCEECCCCS-C-CS
T ss_pred CCEEEEEeCCCceEeeeecCCcCCC-------cceEECCCCCEEEEE-----CCCCEEEEEECCCceeEeecccc-C-CC
Confidence 2356667766654332211100111 23333 67876654 33678888887665443321111 1 11
Q ss_pred ceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccc--eEEEeCCEEEEEEe-CCeEEEEECCCCeE
Q 038188 260 FESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSP--CGFWKNNAVLMESI-NGKLLLYDLVVQEM 335 (384)
Q Consensus 260 ~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~--~~~~~~~~il~~~~-~~~l~~yd~~t~~~ 335 (384)
...+... +|+|++..... ..+.+|-.+... ... . .......| +.+.+++.+++... .+.+..||++++..
T Consensus 152 p~~i~~~~~g~l~v~~~~~--~~i~~~~~~~~~--~~~-~-~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 152 PDGVAVDNSGNVYVTDTDN--NRVVKLEAESNN--QVV-L-PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CCCEEECTTCCEEEEEGGG--TEEEEECTTTCC--EEE-C-CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred ceeEEEeCCCCEEEEECCC--CEEEEEecCCCc--eEe-e-cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 2234443 67887776544 566665544321 111 1 11112334 44445667777654 55699999988765
Q ss_pred EE
Q 038188 336 RD 337 (384)
Q Consensus 336 ~~ 337 (384)
..
T Consensus 226 ~~ 227 (270)
T 1rwi_B 226 TV 227 (270)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 70
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=80.33 E-value=25 Score=29.56 Aligned_cols=193 Identities=10% Similarity=0.000 Sum_probs=97.0
Q ss_pred ccccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccE
Q 038188 107 GPYDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAH 184 (384)
Q Consensus 107 ~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (384)
+..+|.|.+.+ .+.++++++.++....+-.... ....++.+|+..+...+.- .. ...
T Consensus 44 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~---------~~p~~ia~d~~~~~lyv~d------~~------~~~ 102 (267)
T 1npe_A 44 DCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL---------GSPEGIALDHLGRTIFWTD------SQ------LDR 102 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC---------CCEEEEEEETTTTEEEEEE------TT------TTE
T ss_pred ecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC---------CCccEEEEEecCCeEEEEE------CC------CCE
Confidence 44567776666 3578888887765433321111 1334566776543222211 10 356
Q ss_pred EEEEEcCCCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCce
Q 038188 185 VAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFE 261 (384)
Q Consensus 185 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~ 261 (384)
+.+++.....-+.+... . . ....++.+ +|.+||.... .....|..++++....+.+... .. ....
T Consensus 103 I~~~~~~g~~~~~~~~~--~----~-~~P~~i~vd~~~g~lyv~~~~---~~~~~I~~~~~dg~~~~~~~~~-~~-~~P~ 170 (267)
T 1npe_A 103 IEVAKMDGTQRRVLFDT--G----L-VNPRGIVTDPVRGNLYWTDWN---RDNPKIETSHMDGTNRRILAQD-NL-GLPN 170 (267)
T ss_dssp EEEEETTSCSCEEEECS--S----C-SSEEEEEEETTTTEEEEEECC---SSSCEEEEEETTSCCCEEEECT-TC-SCEE
T ss_pred EEEEEcCCCCEEEEEEC--C----C-CCccEEEEeeCCCEEEEEECC---CCCcEEEEEecCCCCcEEEEEC-CC-CCCc
Confidence 77777754322221110 0 0 01123444 5899998631 1246888999876554433211 11 1222
Q ss_pred eEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEe-CCEEEEEEe-CCeEEEEECCCCeE-E
Q 038188 262 SLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWK-NNAVLMESI-NGKLLLYDLVVQEM-R 336 (384)
Q Consensus 262 ~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~~-~~~l~~yd~~t~~~-~ 336 (384)
.++.. ++.||++.... .++.+.-++.. .....+. ....|.++.. ++.+++... .+.+..+|+++++. +
T Consensus 171 gia~d~~~~~lyv~d~~~--~~I~~~~~~g~--~~~~~~~---~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 171 GLTFDAFSSQLCWVDAGT--HRAECLNPAQP--GRRKVLE---GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMD 243 (267)
T ss_dssp EEEEETTTTEEEEEETTT--TEEEEEETTEE--EEEEEEE---CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEcCCCCEEEEEECCC--CEEEEEecCCC--ceEEEec---CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceE
Confidence 34443 56788876554 55444444321 1111111 1234555433 567777654 56899999998764 4
Q ss_pred EEe
Q 038188 337 DLG 339 (384)
Q Consensus 337 ~v~ 339 (384)
.+.
T Consensus 244 ~i~ 246 (267)
T 1npe_A 244 TFH 246 (267)
T ss_dssp EEC
T ss_pred EEc
Confidence 444
No 71
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=79.68 E-value=35 Score=30.79 Aligned_cols=192 Identities=13% Similarity=0.123 Sum_probs=97.7
Q ss_pred cccceEEEee--CCeEEEEccCcccccc-cCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccE
Q 038188 108 PYDGIFCLCD--GGLITLWNPATKECRT-LPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAH 184 (384)
Q Consensus 108 s~~GLl~~~~--~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (384)
+.+|-+++.. .+.+.++|+.+++... ++... .....+.+++.. .+-++.- .. ...
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~-~~l~~~~----~~-------~~~ 235 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG----------KWSKILLYDPIR-DLVYCSN----WI-------SED 235 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS----------SSEEEEEEETTT-TEEEEEE----TT-------TTE
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC----------CCeeEEEEcCCC-CEEEEEe----cC-------CCc
Confidence 4566665554 3688999998876543 32111 123345556533 3222221 11 357
Q ss_pred EEEEEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecC-C--CCccEEEEEEcCCceeee-ecCCCCCCC
Q 038188 185 VAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAG-D--FHSKLILLFRISDEEFQE-IQRPCIPYT 258 (384)
Q Consensus 185 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~-~--~~~~~il~fD~~~~~~~~-i~~P~~~~~ 258 (384)
+.+|+.+++.....-... ..+ .++.+ +|...+...... . ...+.|..+|+.+.+... +..+.
T Consensus 236 i~~~d~~~~~~~~~~~~~-~~~-------~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~---- 303 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDKI-GLP-------RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG---- 303 (433)
T ss_dssp EEEEETTTTEEEEECCCC-SEE-------EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE----
T ss_pred EEEEECCCCcEEEEecCC-CCc-------eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC----
Confidence 888998876543221110 001 12222 565555543211 0 135688899998765533 22221
Q ss_pred CceeEEEE-CC-eEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE-EEEEEe--------------
Q 038188 259 PFESLAPL-NG-SIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA-VLMESI-------------- 321 (384)
Q Consensus 259 ~~~~l~~~-~G-~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~-------------- 321 (384)
....+... +| .|++....+ ..+.+|-++. ...+..+.... -...+.+.+++. +++...
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~--~~v~v~d~~~--~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~ 378 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCC--SKIEVYDLKE--KKVQKSIPVFD-KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGL 378 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTT--TEEEEEETTT--TEEEEEEECSS-SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCS
T ss_pred CcceEEECCCCCEEEEEecCC--CEEEEEECCC--CcEEEEecCCC-CCCeEEEcCCCCEEEEEecCCCccccccccccc
Confidence 11223322 45 455554444 7899998875 23333343211 223445555665 444443
Q ss_pred -CCeEEEEECCCCeEEEE
Q 038188 322 -NGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 322 -~~~l~~yd~~t~~~~~v 338 (384)
++.+..||+++++....
T Consensus 379 ~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 379 VLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp SCCEEEEEETTTTEEEEE
T ss_pred cceEEEEEECCCCcEEEE
Confidence 24899999999876543
No 72
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=79.16 E-value=32 Score=30.06 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=57.9
Q ss_pred ccEEEEEEcCCceeeee-cCCCCCCCCceeEEEE-C--CeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceE
Q 038188 234 SKLILLFRISDEEFQEI-QRPCIPYTPFESLAPL-N--GSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCG 309 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~-~--G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~ 309 (384)
.+.|..+|+..+....+ .+.... ..-..+... . |.+.+....+ ..+.||-++...|.....+.....-..-+.
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~l~s~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 108 (379)
T 3jrp_A 32 DKTIKIFEVEGETHKLIDTLTGHE-GPVWRVDWAHPKFGTILASCSYD--GKVLIWKEENGRWSQIAVHAVHSASVNSVQ 108 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCS-SCEEEEEECCGGGCSEEEEEETT--SCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred CCcEEEEecCCCcceeeeEecCCC-CcEEEEEeCCCCCCCEEEEeccC--CEEEEEEcCCCceeEeeeecCCCcceEEEE
Confidence 45677777765555443 222111 112233332 2 6666665555 789999998877877776654432233444
Q ss_pred EEeC--C-EEEEEEeCCeEEEEECCCCe
Q 038188 310 FWKN--N-AVLMESINGKLLLYDLVVQE 334 (384)
Q Consensus 310 ~~~~--~-~il~~~~~~~l~~yd~~t~~ 334 (384)
+.++ + .++....++.+.+||++++.
T Consensus 109 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 109 WAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp ECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred eCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 5444 4 45555677889999998873
No 73
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=78.23 E-value=36 Score=30.15 Aligned_cols=187 Identities=10% Similarity=0.054 Sum_probs=96.2
Q ss_pred cceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEE
Q 038188 110 DGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAV 187 (384)
Q Consensus 110 ~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (384)
+..+.+.. .+.+.++|+.+++....-... .....+.+.+.. .+-++.. .. ...+.+
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~----------~~~~~~~~s~dg-~~l~~~~----~~-------~~~v~~ 142 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKTG----------KSPLGLALSPDG-KKLYVTN----NG-------DKTVSV 142 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECS----------SSEEEEEECTTS-SEEEEEE----TT-------TTEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEEEeCC----------CCcceEEECCCC-CEEEEEe----CC-------CCEEEE
Confidence 33344443 368999999998775532211 122445555532 3322221 11 457888
Q ss_pred EEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeee-ecCCCCCCCCceeEE
Q 038188 188 YTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQE-IQRPCIPYTPFESLA 264 (384)
Q Consensus 188 yss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~l~ 264 (384)
|+.+++.....-... ..+ ..+.+ +|...++.. ...+.|..+|+.+.+... +.... ....+.
T Consensus 143 ~d~~~~~~~~~~~~~-~~~-------~~~~~~~dg~~l~~~~----~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~ 206 (391)
T 1l0q_A 143 INTVTKAVINTVSVG-RSP-------KGIAVTPDGTKVYVAN----FDSMSISVIDTVTNSVIDTVKVEA----APSGIA 206 (391)
T ss_dssp EETTTTEEEEEEECC-SSE-------EEEEECTTSSEEEEEE----TTTTEEEEEETTTTEEEEEEECSS----EEEEEE
T ss_pred EECCCCcEEEEEecC-CCc-------ceEEECCCCCEEEEEe----CCCCEEEEEECCCCeEEEEEecCC----CccceE
Confidence 888876543321110 001 12222 465444443 346789999998776543 33221 112233
Q ss_pred EE-CCe-EEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE-EEEE-EeCCeEEEEECCCCeEEE
Q 038188 265 PL-NGS-IALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA-VLME-SINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 265 ~~-~G~-L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~-~~~~~l~~yd~~t~~~~~ 337 (384)
.. +|+ |++...+.....+.+|-++.. ..+..+.... ....+.+..++. +++. ..++.+.+||+++++...
T Consensus 207 ~~~~g~~l~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 207 VNPEGTKAYVTNVDKYFNTVSMIDTGTN--KITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp ECTTSSEEEEEEECSSCCEEEEEETTTT--EEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEecCcCCCcEEEEECCCC--eEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEE
Confidence 32 554 444443223478888887652 2334443222 112344555664 4444 346789999999987654
No 74
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=78.22 E-value=33 Score=29.72 Aligned_cols=203 Identities=8% Similarity=-0.029 Sum_probs=99.5
Q ss_pred ccccceEEEee--CCeEEEEccCcccccc-cCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEeccccccccccc
Q 038188 107 GPYDGIFCLCD--GGLITLWNPATKECRT-LPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHA 183 (384)
Q Consensus 107 ~s~~GLl~~~~--~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 183 (384)
...++.+.+.. .+.+.++|+.|++... ++......+. ........++.+++..+ +-++.- . .. ..
T Consensus 97 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~-~l~~~~--~-~~-------~~ 164 (353)
T 3vgz_A 97 NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTE-EVRPLQPRELVADDATN-TVYISG--I-GK-------ES 164 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCS-SCCCCEEEEEEEETTTT-EEEEEE--E-SS-------SC
T ss_pred CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcccc-ccCCCCCceEEECCCCC-EEEEEe--c-CC-------Cc
Confidence 33444455544 3689999999988643 3322111000 00011234566676443 322221 0 11 35
Q ss_pred EEEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceee-eecCCCCC-CCCce
Q 038188 184 HVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQ-EIQRPCIP-YTPFE 261 (384)
Q Consensus 184 ~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~-~~~~~ 261 (384)
.+.+|+..++.=...-......+. .-.+.-+|...+... ..+.|..+|+.+.+.. .+..+... .....
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~-----~~~~s~dg~~l~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 234 (353)
T 3vgz_A 165 VIWVVDGGNIKLKTAIQNTGKMST-----GLALDSEGKRLYTTN-----ADGELITIDTADNKILSRKKLLDDGKEHFFI 234 (353)
T ss_dssp EEEEEETTTTEEEEEECCCCTTCC-----CCEEETTTTEEEEEC-----TTSEEEEEETTTTEEEEEEECCCSSSCCCEE
T ss_pred eEEEEcCCCCceEEEecCCCCccc-----eEEECCCCCEEEEEc-----CCCeEEEEECCCCeEEEEEEcCCCCCCcccc
Confidence 678888876532211000000011 112223565444442 2678889999887664 34553221 11222
Q ss_pred eEEEE-CCe-EEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE-EEEEE-eCCeEEEEECCCCeEEE
Q 038188 262 SLAPL-NGS-IALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA-VLMES-INGKLLLYDLVVQEMRD 337 (384)
Q Consensus 262 ~l~~~-~G~-L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~-~~~~l~~yd~~t~~~~~ 337 (384)
.+... +|+ |++..... ..+.+|-++...-.....+. . ...+.+..++. +++.. .++.+.+||.++++...
T Consensus 235 ~~~~s~dg~~l~~~~~~~--~~v~~~d~~~~~~~~~~~~~--~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 235 NISLDTARQRAFITDSKA--AEVLVVDTRNGNILAKVAAP--E--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EEEEETTTTEEEEEESSS--SEEEEEETTTCCEEEEEECS--S--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEECCCCCEEEEEeCCC--CEEEEEECCCCcEEEEEEcC--C--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 34443 454 65554333 67777766543333222221 1 12355666655 55555 46789999999987654
No 75
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=78.11 E-value=35 Score=29.95 Aligned_cols=94 Identities=7% Similarity=0.131 Sum_probs=51.6
Q ss_pred ccEEEEEEcCCce-eeeec-CCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEE
Q 038188 234 SKLILLFRISDEE-FQEIQ-RPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGF 310 (384)
Q Consensus 234 ~~~il~fD~~~~~-~~~i~-~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 310 (384)
.+.|..+|+.++. ...+. +.... ..-..+... +|.+.+....+ ..+.+|-++...|....++..+.....-+.+
T Consensus 126 D~~v~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~d--~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~ 202 (345)
T 3fm0_A 126 DKSVWVWEVDEEDEYECVSVLNSHT-QDVKHVVWHPSQELLASASYD--DTVKLYREEEDDWVCCATLEGHESTVWSLAF 202 (345)
T ss_dssp TSCEEEEEECTTSCEEEEEEECCCC-SCEEEEEECSSSSCEEEEETT--SCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred CCeEEEEECCCCCCeEEEEEecCcC-CCeEEEEECCCCCEEEEEeCC--CcEEEEEecCCCEEEEEEecCCCCceEEEEE
Confidence 5567777776542 22221 11111 111222222 55655555555 7899999887778877776544422334555
Q ss_pred EeCCEEEEE-EeCCeEEEEEC
Q 038188 311 WKNNAVLME-SINGKLLLYDL 330 (384)
Q Consensus 311 ~~~~~il~~-~~~~~l~~yd~ 330 (384)
.+++..++. ..++.+.+||.
T Consensus 203 sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 203 DPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp CTTSSEEEEEETTSCEEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEecc
Confidence 556655444 55677888875
No 76
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=77.29 E-value=30 Score=29.49 Aligned_cols=108 Identities=4% Similarity=-0.099 Sum_probs=61.7
Q ss_pred Cce-EEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEE
Q 038188 219 NGV-FYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQF 296 (384)
Q Consensus 219 ~G~-lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~ 296 (384)
+|. +||.. ...+.|..+|+.+. ++.+..|.. ....+... +|+|++..... ..+.+|-.++.......
T Consensus 38 ~g~~l~~~~-----~~~~~i~~~~~~~~-~~~~~~~~~---~~~~l~~~~dg~l~v~~~~~--~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 38 ARSAVIFSD-----VRQNRTWAWSDDGQ-LSPEMHPSH---HQNGHCLNKQGHLIACSHGL--RRLERQREPGGEWESIA 106 (296)
T ss_dssp GGTEEEEEE-----GGGTEEEEEETTSC-EEEEESSCS---SEEEEEECTTCCEEEEETTT--TEEEEECSTTCCEEEEE
T ss_pred CCCEEEEEe-----CCCCEEEEEECCCC-eEEEECCCC---CcceeeECCCCcEEEEecCC--CeEEEEcCCCCcEEEEe
Confidence 565 99987 44778999999988 776655432 22234443 77877655433 56666665444433322
Q ss_pred EeCCCCcc--ccceEEEeCCEEEEEEe------------------CCeEEEEECCCCeEEEE
Q 038188 297 AIGPFLGV--KSPCGFWKNNAVLMESI------------------NGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 297 ~i~~~~~~--~~~~~~~~~~~il~~~~------------------~~~l~~yd~~t~~~~~v 338 (384)
........ ...+.+.+++.+++... .+.++.||.+ ++++.+
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 11110101 12355566778877521 3468889888 555554
No 77
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=76.91 E-value=39 Score=29.89 Aligned_cols=176 Identities=7% Similarity=-0.007 Sum_probs=90.4
Q ss_pred CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCcccc
Q 038188 118 GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRV 197 (384)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 197 (384)
.+.+.++|+.|++....-... .....+.+.+.. .+-++.- .. ...+.+|+..++.-..
T Consensus 53 d~~i~v~d~~~~~~~~~~~~~----------~~v~~~~~spdg-~~l~~~~-----~~------~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 53 SNDVSIIDTATNNVIATVPAG----------SSPQGVAVSPDG-KQVYVTN-----MA------SSTLSVIDTTSNTVAG 110 (391)
T ss_dssp GTEEEEEETTTTEEEEEEECS----------SSEEEEEECTTS-SEEEEEE-----TT------TTEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCeEEEEEECC----------CCccceEECCCC-CEEEEEE-----CC------CCEEEEEECCCCeEEE
Confidence 568999999998876532211 122345555532 3322221 11 3578888888765432
Q ss_pred ccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeee-ecCCCCCCCCceeEEEE-CCe-EEE
Q 038188 198 SKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQE-IQRPCIPYTPFESLAPL-NGS-IAL 272 (384)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~l~~~-~G~-L~l 272 (384)
.-... . .-.++.+ +|...+++. ...+.|..+|+.+.+... +.... ....+... +|+ |++
T Consensus 111 ~~~~~-~-------~~~~~~~s~dg~~l~~~~----~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~~~dg~~l~~ 174 (391)
T 1l0q_A 111 TVKTG-K-------SPLGLALSPDGKKLYVTN----NGDKTVSVINTVTKAVINTVSVGR----SPKGIAVTPDGTKVYV 174 (391)
T ss_dssp EEECS-S-------SEEEEEECTTSSEEEEEE----TTTTEEEEEETTTTEEEEEEECCS----SEEEEEECTTSSEEEE
T ss_pred EEeCC-C-------CcceEEECCCCCEEEEEe----CCCCEEEEEECCCCcEEEEEecCC----CcceEEECCCCCEEEE
Confidence 21110 0 0112222 565443343 446789999998776543 33321 11233332 454 444
Q ss_pred EEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE-EEEEE---eCCeEEEEECCCCeEE
Q 038188 273 LHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA-VLMES---INGKLLLYDLVVQEMR 336 (384)
Q Consensus 273 ~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~---~~~~l~~yd~~t~~~~ 336 (384)
....+ ..+.+|-+... ..+..+.... ....+.+.+++. ++... .++.+.+||+++++..
T Consensus 175 ~~~~~--~~v~~~d~~~~--~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 175 ANFDS--MSISVIDTVTN--SVIDTVKVEA-APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EETTT--TEEEEEETTTT--EEEEEEECSS-EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred EeCCC--CEEEEEECCCC--eEEEEEecCC-CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 44333 78888877652 2333332211 122344455554 55554 4678999999987653
No 78
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=76.26 E-value=34 Score=28.80 Aligned_cols=191 Identities=10% Similarity=0.053 Sum_probs=96.5
Q ss_pred eeccccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccc
Q 038188 105 LLGPYDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEH 182 (384)
Q Consensus 105 ~~~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 182 (384)
+....+|-+.+.. .+.+.++||. ++...++.+... ....++..|+.. ..-+.. .. .
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~--------~~~~~i~~~~~g-~l~v~~-----~~-------~ 82 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPD--------AKVMCLIVSSLG-DIWFTE-----NG-------A 82 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT--------CCEEEEEECTTS-CEEEEE-----TT-------T
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCC--------CcceeEEECCCC-CEEEEe-----cC-------C
Confidence 3334467666665 3678999998 776654332110 123445556432 222211 00 2
Q ss_pred cEEEEEEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCc
Q 038188 183 AHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPF 260 (384)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~ 260 (384)
..+..|+.. +.++...... .. ..-.++.+ +|.+|+.. .....|..+|.+ .+...+.+|... ...
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~-~~-----~~~~~i~~~~~g~l~v~~-----~~~~~i~~~~~~-g~~~~~~~~~~~-~~~ 148 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQ-PD-----SGPYGITEGLNGDIWFTQ-----LNGDRIGKLTAD-GTIYEYDLPNKG-SYP 148 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS-TT-----CCEEEEEECSTTCEEEEE-----TTTTEEEEECTT-SCEEEEECSSTT-CCE
T ss_pred CeEEEECCC-CCeEEecCCC-CC-----CCCccceECCCCCEEEEc-----cCCCeEEEECCC-CCEEEccCCCCC-CCc
Confidence 456677766 5554332110 00 01123333 57776554 336789999998 666666555322 222
Q ss_pred eeEEE-ECCeEEEEEecCCCCeEEEEEEcC-CceeEEEEeCCCCccccceE--EEeCCEEEEEEe-CCeEEEEECCCCeE
Q 038188 261 ESLAP-LNGSIALLHLDESNQYIEIWVMNE-MNWIQQFAIGPFLGVKSPCG--FWKNNAVLMESI-NGKLLLYDLVVQEM 335 (384)
Q Consensus 261 ~~l~~-~~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~--~~~~~~il~~~~-~~~l~~yd~~t~~~ 335 (384)
..+.. .+|+|++..... .. |++++. ..... ... +.. ...|.+ +..++.+++... .+.+..||+ ++++
T Consensus 149 ~~i~~d~~g~l~v~~~~~--~~--i~~~~~~g~~~~-~~~-~~~-~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~ 220 (300)
T 2qc5_A 149 AFITLGSDNALWFTENQN--NS--IGRITNTGKLEE-YPL-PTN-AAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEI 220 (300)
T ss_dssp EEEEECTTSSEEEEETTT--TE--EEEECTTCCEEE-EEC-SST-TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred eeEEECCCCCEEEEecCC--Ce--EEEECCCCcEEE-eeC-CCC-CCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcE
Confidence 33444 367877765433 33 444443 33333 222 111 223433 444667777654 456999999 5555
Q ss_pred EEEe
Q 038188 336 RDLG 339 (384)
Q Consensus 336 ~~v~ 339 (384)
..+.
T Consensus 221 ~~~~ 224 (300)
T 2qc5_A 221 SEYD 224 (300)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 79
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=76.17 E-value=41 Score=29.73 Aligned_cols=183 Identities=9% Similarity=0.031 Sum_probs=92.5
Q ss_pred CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCcccc
Q 038188 118 GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRV 197 (384)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~ 197 (384)
++.+.|||..+++....-..... . .....+.+.|..+.+-+.. . . ...+.+++..++..+.
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~h-----~--~~v~~~~~~~~~~~~l~s~--~---~-------d~~i~iwd~~~~~~~~ 155 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMGP-----G--DAITGMKFNQFNTNQLFVS--S---I-------RGATTLRDFSGSVIQV 155 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCST-----T--CBEEEEEEETTEEEEEEEE--E---T-------TTEEEEEETTSCEEEE
T ss_pred CCeEEEEeCCCcccceeeecCCc-----C--CceeEEEeCCCCCCEEEEE--e---C-------CCEEEEEECCCCceEE
Confidence 46788999998877654322111 1 2334455554322222211 1 1 4567888887655544
Q ss_pred ccCCccc-cceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCe-EEEEE
Q 038188 198 SKGNIKW-IPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGS-IALLH 274 (384)
Q Consensus 198 ~~~~~~~-~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~-L~l~~ 274 (384)
....... .+. ..-...-+|...... ...+.|..+|+..+....+.... ..-..+... +|. +.+..
T Consensus 156 ~~~~~~~~~~v----~~~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~h~---~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 156 FAKTDSWDYWY----CCVDVSVSRQMLATG-----DSTGRLLLLGLDGHEIFKEKLHK---AKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp EECCCCSSCCE----EEEEEETTTTEEEEE-----ETTSEEEEEETTSCEEEEEECSS---SCEEEEEECSSCTTEEEEE
T ss_pred EeccCCCCCCe----EEEEECCCCCEEEEE-----CCCCCEEEEECCCCEEEEeccCC---CcEEEEEECCCCCCEEEEE
Confidence 3321100 000 001112245543333 33678888998766555554321 112233333 455 55555
Q ss_pred ecCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEe-CCEEE-EEEeCCeEEEEECCCCe
Q 038188 275 LDESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWK-NNAVL-MESINGKLLLYDLVVQE 334 (384)
Q Consensus 275 ~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~-~~~il-~~~~~~~l~~yd~~t~~ 334 (384)
..+ ..+.+|-+.. ..-..+..+. ......-+.+.+ ++..+ ....++.+.+||+++.+
T Consensus 224 ~~d--~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 224 SVD--ATVKLWDLRNIKDKNSYIAEMP-HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp ETT--SEEEEEEGGGCCSTTCEEEEEE-CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred eCC--CEEEEEeCCCCCcccceEEEec-CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 555 7999999876 1223333332 221223344555 55554 44667889999998864
No 80
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=75.91 E-value=37 Score=29.09 Aligned_cols=102 Identities=8% Similarity=-0.056 Sum_probs=57.3
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFA 297 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~ 297 (384)
+|.+||.. .....|..+|+.+.....+..|... ..++.. +|+|++.. . ..+.+|-.+...+..+..
T Consensus 24 ~~~l~~~d-----~~~~~i~~~d~~~~~~~~~~~~~~~----~~i~~~~dG~l~v~~--~--~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 24 SNSLLFVD-----IPAKKVCRWDSFTKQVQRVTMDAPV----SSVALRQSGGYVATI--G--TKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp TTEEEEEE-----TTTTEEEEEETTTCCEEEEECSSCE----EEEEEBTTSSEEEEE--T--TEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEE-----CCCCEEEEEECCCCcEEEEeCCCce----EEEEECCCCCEEEEE--C--CeEEEEECCCCcEEEEEe
Confidence 48899987 4578999999998877766665322 234433 67765543 2 444444443344544443
Q ss_pred eCCCCccccc--eEEEeCCEEEEEEe------------CCeEEEEECCCC
Q 038188 298 IGPFLGVKSP--CGFWKNNAVLMESI------------NGKLLLYDLVVQ 333 (384)
Q Consensus 298 i~~~~~~~~~--~~~~~~~~il~~~~------------~~~l~~yd~~t~ 333 (384)
........++ +.+.+++.+++... .+.++.+|...+
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~ 140 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH 140 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC
Confidence 3211111222 34445677766542 235777877643
No 81
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=75.88 E-value=67 Score=32.06 Aligned_cols=143 Identities=9% Similarity=0.017 Sum_probs=75.0
Q ss_pred cEEEEEEcCCCccccccCCc-cccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCC-CC
Q 038188 183 AHVAVYTSSTDSWRVSKGNI-KWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIP-YT 258 (384)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~~-~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~-~~ 258 (384)
..+..|+..++.|+...... ...+. ..-.+++. +|.+ |++. ....+..||..++++..+..+... ..
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~---~~i~~i~~d~~g~l-Wigt-----~~~Gl~~~~~~~~~~~~~~~~~~l~~~ 539 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLE---NFVRSIAQDSEGRF-WIGT-----FGGGVGIYTPDMQLVRKFNQYEGFCSN 539 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSC---SCEEEEEECTTCCE-EEEE-----SSSCEEEECTTCCEEEEECTTTTCSCS
T ss_pred CceEEEeCCCCeEEecccCccccccc---ceeEEEEEcCCCCE-EEEE-----cCCCEEEEeCCCCeEEEccCCCCCCCC
Confidence 45777888888887653221 00000 11123333 4554 6664 135789999999999887544322 12
Q ss_pred CceeEEEE-CCeEEEEEecCCCCeEEEEEEcC--CceeEEEEeCCCCc-cccceEEEeCCEEEEEEeCCeEEEEECCCCe
Q 038188 259 PFESLAPL-NGSIALLHLDESNQYIEIWVMNE--MNWIQQFAIGPFLG-VKSPCGFWKNNAVLMESINGKLLLYDLVVQE 334 (384)
Q Consensus 259 ~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~-~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~ 334 (384)
.-..+.+. +|.|.+.+. . .+ |..++. ..+.....-+.++. ...-+...+++.|.+.+..+ +..||+++++
T Consensus 540 ~i~~i~~d~~g~lWi~T~-~---Gl-v~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~G-l~~~~~~~~~ 613 (781)
T 3v9f_A 540 TINQIYRSSKGQMWLATG-E---GL-VCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTG-ISCYITSKKC 613 (781)
T ss_dssp CEEEEEECTTSCEEEEET-T---EE-EEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECSSC-EEEEETTTTE
T ss_pred eeEEEEECCCCCEEEEEC-C---Cc-eEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcCCc-eEEEECCCCc
Confidence 22344443 667766543 1 12 133332 33332111111110 11122233467787777666 9999999999
Q ss_pred EEEEee
Q 038188 335 MRDLGR 340 (384)
Q Consensus 335 ~~~v~~ 340 (384)
++.+..
T Consensus 614 ~~~~~~ 619 (781)
T 3v9f_A 614 FYTYDH 619 (781)
T ss_dssp EEEECG
T ss_pred eEEecc
Confidence 887754
No 82
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=75.65 E-value=39 Score=29.18 Aligned_cols=104 Identities=12% Similarity=0.082 Sum_probs=60.2
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcC--CceeEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNE--MNWIQQ 295 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~--~~W~~~ 295 (384)
+|.+||.. ...+.|..+|.+.+.-..+..+. .-..++.. +|+|+++.... ....|+.++. .....+
T Consensus 42 ~g~lyv~d-----~~~~~I~~~d~~g~~~~~~~~~~----~p~gia~~~dG~l~vad~~~--~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 42 DGTIFVTN-----HEVGEIVSITPDGNQQIHATVEG----KVSGLAFTSNGDLVATGWNA--DSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp TSCEEEEE-----TTTTEEEEECTTCCEEEEEECSS----EEEEEEECTTSCEEEEEECT--TSCEEEEEECTTSCEEEE
T ss_pred CCCEEEEe-----CCCCeEEEECCCCceEEEEeCCC----CceeEEEcCCCcEEEEeccC--CcceEEEEcCCCCeEEEE
Confidence 68899886 34678999999876544455542 12234443 67887776543 3345666643 444444
Q ss_pred EEeCCCCccccceEEEeCCEEEEEE-eCCeEEEEECCCCe
Q 038188 296 FAIGPFLGVKSPCGFWKNNAVLMES-INGKLLLYDLVVQE 334 (384)
Q Consensus 296 ~~i~~~~~~~~~~~~~~~~~il~~~-~~~~l~~yd~~t~~ 334 (384)
..+.... ......++.++.+++.. ..+.++.+|+.+++
T Consensus 111 ~~~~~~~-~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 111 LTLPDAI-FLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp EECTTCS-CEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred EeCCCcc-ccCcccccCCCcEEEEECCCCeEEEEeCCCCc
Confidence 4432111 11122234466666665 36789999998764
No 83
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=75.58 E-value=40 Score=29.25 Aligned_cols=68 Identities=13% Similarity=0.091 Sum_probs=39.7
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEE-EEEEeCCeEEEEECCCCeEEE
Q 038188 267 NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAV-LMESINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i-l~~~~~~~l~~yd~~t~~~~~ 337 (384)
+|++.++...+ ..+.+|-+.. ....+..+.....-..-+.+.+++.. +....++.+.+||+++++...
T Consensus 186 ~~~~l~~~~~d--g~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 186 KGKYIIAGHKD--GKISKYDVSN-NYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp GGCEEEEEETT--SEEEEEETTT-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEcCC--CEEEEEECCC-CcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 55555555444 7899998874 13333444332222233444455554 445667889999999977544
No 84
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=75.49 E-value=63 Score=31.56 Aligned_cols=185 Identities=9% Similarity=0.020 Sum_probs=95.2
Q ss_pred ceEEEeeCCeEEEEccCccccc-ccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEE
Q 038188 111 GIFCLCDGGLITLWNPATKECR-TLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYT 189 (384)
Q Consensus 111 GLl~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (384)
.+|++.....+...+..+.+.. .+|-... ....++.||+..+.-.+.-. . ..++..++
T Consensus 7 ~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~---------~~~~~l~~d~~~~~lywtD~-----~-------~~~I~r~~ 65 (628)
T 4a0p_A 7 AFLLFSRRADIRRISLETNNNNVAIPLTGV---------KEASALDFDVTDNRIYWTDI-----S-------LKTISRAF 65 (628)
T ss_dssp CEEEEEETTEEEEEESSCTTCEEECCCCSC---------SCEEEEEEETTTTEEEEEET-----T-------TTEEEEEE
T ss_pred cEEEEEeCCcEEEEECCCCCcceEEEcCCC---------CceEEEEEECCCCEEEEEEC-----C-------CCeEEEEE
Confidence 3566777778888888765543 3343221 24577888886553222111 0 34555566
Q ss_pred cCCCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE
Q 038188 190 SSTDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL 266 (384)
Q Consensus 190 s~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 266 (384)
......+.+-.. .+ ....++.+ +|.|||.. ...+.|..+|++...-..+-. ... .....|++-
T Consensus 66 ~~g~~~~~v~~~--g~-----~~P~GlAvD~~~~~LY~tD-----~~~~~I~v~~~dG~~~~~l~~-~~l-~~P~~iavd 131 (628)
T 4a0p_A 66 MNGSALEHVVEF--GL-----DYPEGMAVDWLGKNLYWAD-----TGTNRIEVSKLDGQHRQVLVW-KDL-DSPRALALD 131 (628)
T ss_dssp TTSCSCEEEECS--SC-----SCCCEEEEETTTTEEEEEE-----TTTTEEEEEETTSTTCEEEEC-SSC-CCEEEEEEE
T ss_pred CCCCCcEEEEeC--CC-----CCcceEEEEeCCCEEEEEE-----CCCCEEEEEecCCCcEEEEEe-CCC-CCcccEEEc
Confidence 555444333211 10 01134555 58999976 457899999997654333321 111 122345554
Q ss_pred --CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEE--e-CCEEEEEEe-CCeEEEEECCCCeEE
Q 038188 267 --NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFW--K-NNAVLMESI-NGKLLLYDLVVQEMR 336 (384)
Q Consensus 267 --~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~--~-~~~il~~~~-~~~l~~yd~~t~~~~ 336 (384)
+|.||+..... ...+...-++...-..+ +. .+..|.++. . ++.|++... ...+..+|+.++..+
T Consensus 132 p~~G~lY~tD~g~-~~~I~r~~~dG~~~~~l--~~---~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 132 PAEGFMYWTEWGG-KPKIDRAAMDGSERTTL--VP---NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE 201 (628)
T ss_dssp TTTTEEEEEECSS-SCEEEEEETTSCSCEEE--EC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred cCCCeEEEeCCCC-CCEEEEEeCCCCceEEE--EC---CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE
Confidence 78888876532 23444333443221111 11 234555443 2 456666543 455777777665443
No 85
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=75.21 E-value=43 Score=29.44 Aligned_cols=126 Identities=10% Similarity=0.026 Sum_probs=68.4
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQF 296 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~ 296 (384)
+|.|||... .....|..+|++...-..+-.. .. ...-.|+.. +|+||++.... ..+...-++.. -.++.
T Consensus 133 ~g~ly~td~----~~~~~I~r~~~dG~~~~~~~~~-~l-~~Pnglavd~~~~~lY~aD~~~--~~I~~~d~dG~-~~~~~ 203 (318)
T 3sov_A 133 SGFMYWTDW----GEVPKIERAGMDGSSRFIIINS-EI-YWPNGLTLDYEEQKLYWADAKL--NFIHKSNLDGT-NRQAV 203 (318)
T ss_dssp GTEEEEEEC----SSSCEEEEEETTSCSCEEEECS-SC-SCEEEEEEETTTTEEEEEETTT--TEEEEEETTSC-SCEEE
T ss_pred CCEEEEEec----CCCCEEEEEEcCCCCeEEEEEC-CC-CCccEEEEeccCCEEEEEECCC--CEEEEEcCCCC-ceEEE
Confidence 589999863 2367899999975433332111 11 112244544 77899887544 55555555431 11111
Q ss_pred EeCCCCccccceEEE-eCCEEEEEEe-CCeEEEEECCCCe-EEEEeeccCCCCcceEEEEEEeccce
Q 038188 297 AIGPFLGVKSPCGFW-KNNAVLMESI-NGKLLLYDLVVQE-MRDLGRFSSGELGAAILIYCYKESLI 360 (384)
Q Consensus 297 ~i~~~~~~~~~~~~~-~~~~il~~~~-~~~l~~yd~~t~~-~~~v~~~~~~~~~~~~~~~~y~~sL~ 360 (384)
+. ..+..|.++. .++.+++... .+.+..+|..+++ .+.+.. +.. ..+.+.+|.++..
T Consensus 204 -~~--~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~-~~~---~P~~i~v~~~~~q 263 (318)
T 3sov_A 204 -VK--GSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHS-DIF---SPMDIHAFSQQRQ 263 (318)
T ss_dssp -EC--SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC-CCS---SCCCEEEECGGGS
T ss_pred -ec--CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeC-CCC---CCcEEEEeccccc
Confidence 11 1245666654 3567777654 5679999997655 344443 222 2334567776553
No 86
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=74.86 E-value=15 Score=32.52 Aligned_cols=139 Identities=8% Similarity=0.087 Sum_probs=65.8
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCce-eeee-cCCCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEE-FQEI-QRPCIPY 257 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~-~~~i-~~P~~~~ 257 (384)
.-.+.+|+..++.|+.+.....+-. .-.++.+ +|.+...+ ...+.|..+|+.+.. +..+ .+... .
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~h~~-----~v~~~~~s~~~~~l~s~-----s~d~~v~vwd~~~~~~~~~~~~~~~~-~ 100 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSDHDK-----IVTCVDWAPKSNRIVTC-----SQDRNAYVYEKRPDGTWKQTLVLLRL-N 100 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCCCSS-----CEEEEEECTTTCCEEEE-----ETTSSEEEC------CCCCEEECCCC-S
T ss_pred CCEEEEEEccCCceEEEEEEecCCc-----eEEEEEEeCCCCEEEEE-----eCCCeEEEEEcCCCCceeeeeEeccc-C
Confidence 3567788888877766543311100 0011222 34433332 225677888887766 3332 22111 1
Q ss_pred CCceeEEEE-CCeEEEEEecCCCCeEEEEEEcC-CceeEEEEeCC-CCccccceEEEeCCEEE-EEEeCCeEEEEECCCC
Q 038188 258 TPFESLAPL-NGSIALLHLDESNQYIEIWVMNE-MNWIQQFAIGP-FLGVKSPCGFWKNNAVL-MESINGKLLLYDLVVQ 333 (384)
Q Consensus 258 ~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~-~~~~~~~~~~~~~~~il-~~~~~~~l~~yd~~t~ 333 (384)
..-..+... +|++.+....+ ..+.+|-++. ..|.....+.. ......-+.+.+++..+ ....++.+.+||++++
T Consensus 101 ~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 101 RAATFVRWSPNEDKFAVGSGA--RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp SCEEEEECCTTSSCCEEEESS--SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCS
T ss_pred CceEEEEECCCCCEEEEEecC--CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEec
Confidence 122223322 56655555554 7899999887 55666666653 33223344555565544 4466778999998643
No 87
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=74.82 E-value=40 Score=28.96 Aligned_cols=111 Identities=9% Similarity=0.054 Sum_probs=58.6
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCcee----eeecCCCCCCCCceeEEEE-CCe-EEEEEecCCCCeEEEEEEcCCce
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEF----QEIQRPCIPYTPFESLAPL-NGS-IALLHLDESNQYIEIWVMNEMNW 292 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~----~~i~~P~~~~~~~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l~~~~W 292 (384)
+|...++.. ...+.|..+|+.+.+. ..++... ....+... +|+ |++..... ..+.+|-++....
T Consensus 186 dg~~l~v~~----~~~~~v~v~d~~~~~~~~~~~~~~~~~----~~~~~~~spdg~~l~v~~~~~--~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 186 DGNFAFVAN----LIGNSIGILETQNPENITLLNAVGTNN----LPGTIVVSRDGSTVYVLTEST--VDVFNFNQLSGTL 255 (331)
T ss_dssp TSSEEEEEE----TTTTEEEEEECSSTTSCEEEEEEECSS----CCCCEEECTTSSEEEEECSSE--EEEEEEETTTTEE
T ss_pred CCCEEEEEe----CCCCeEEEEECCCCcccceeeeccCCC----CCceEEECCCCCEEEEEEcCC--CEEEEEECCCCce
Confidence 576444443 3467899999987664 2333321 11233333 666 44443322 5566666655433
Q ss_pred eEEEEeCCC----Ccc---ccceEEEeCCEE-EEEEe-CCeEEEEECCCCeEEEEe
Q 038188 293 IQQFAIGPF----LGV---KSPCGFWKNNAV-LMESI-NGKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 293 ~~~~~i~~~----~~~---~~~~~~~~~~~i-l~~~~-~~~l~~yd~~t~~~~~v~ 339 (384)
..+..+... +.. ...+.+.++++. ++... ++.+.+||+.++....+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~ 311 (331)
T 3u4y_A 256 SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVA 311 (331)
T ss_dssp EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECT
T ss_pred eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccccee
Confidence 333333211 100 122466667654 44443 457999999998876653
No 88
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=74.47 E-value=43 Score=30.53 Aligned_cols=120 Identities=13% Similarity=0.069 Sum_probs=70.9
Q ss_pred ECceEEEEEeecCCCCccEEEEEEcCCceeee---ecC-------CCCCCCCceeEEEE--CCeEEEEEecC-----CCC
Q 038188 218 LNGVFYWFVSRAGDFHSKLILLFRISDEEFQE---IQR-------PCIPYTPFESLAPL--NGSIALLHLDE-----SNQ 280 (384)
Q Consensus 218 ~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~---i~~-------P~~~~~~~~~l~~~--~G~L~l~~~~~-----~~~ 280 (384)
.+|.++|.+. .+.+..+|+.++.-.. +.+ +...-+....++.. +++||+..... ...
T Consensus 236 ~dG~~~~vs~------~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 236 KAGRLVWPTY------TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp TTTEEEEEBT------TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred CCCcEEEEeC------CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCC
Confidence 3789999764 5689999998775332 221 00000111223333 55788874311 123
Q ss_pred eEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE-EEEE-Ee-CCeEEEEECCCCeE-EEEeeccCC
Q 038188 281 YIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA-VLME-SI-NGKLLLYDLVVQEM-RDLGRFSSG 344 (384)
Q Consensus 281 ~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~-~~-~~~l~~yd~~t~~~-~~v~~~~~~ 344 (384)
.=+||+++-.++..+.+|.... -..-+.+..+++ .++. .. .+.+.+||..|++. +.+...+.+
T Consensus 310 ~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p 376 (386)
T 3sjl_D 310 SRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG 376 (386)
T ss_dssp EEEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSS
T ss_pred CCEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCC
Confidence 5789999987777777775221 122456666664 4444 33 57899999999774 556555555
No 89
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=74.34 E-value=47 Score=29.47 Aligned_cols=137 Identities=10% Similarity=0.092 Sum_probs=73.5
Q ss_pred cEEEEEEcCCC--ccccccCCcccc---ceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeee-ecCCCCC
Q 038188 183 AHVAVYTSSTD--SWRVSKGNIKWI---PYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQE-IQRPCIP 256 (384)
Q Consensus 183 ~~~~vyss~t~--~W~~~~~~~~~~---~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~ 256 (384)
-.+..|+..++ .|+.....+... .........++..+|.+|.... .+.+.++|..+.+... .+.+
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g~l~~~d~~tG~~~w~~~~~--- 268 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY------NGNLTALDLRSGQIMWKRELG--- 268 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT------TSCEEEEETTTCCEEEEECCC---
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec------CcEEEEEECCCCcEEeeccCC---
Confidence 45677777665 576542211000 0000122356777888887653 6789999997654332 2222
Q ss_pred CCCceeEEEECCeEEEEEecCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEEEeCCeEEEEECCCCe
Q 038188 257 YTPFESLAPLNGSIALLHLDESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESINGKLLLYDLVVQE 334 (384)
Q Consensus 257 ~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~ 334 (384)
....+...+|.|++...+ ..+..+-.+. ..|.... . .......|+. .++.|++...++.++.+|.++++
T Consensus 269 --~~~~~~~~~~~l~~~~~~---g~l~~~d~~tG~~~w~~~~-~-~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 269 --SVNDFIVDGNRIYLVDQN---DRVMALTIDGGVTLWTQSD-L-LHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp --CEEEEEEETTEEEEEETT---CCEEEEETTTCCEEEEECT-T-TTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred --CCCCceEECCEEEEEcCC---CeEEEEECCCCcEEEeecc-c-CCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCc
Confidence 123455567777776532 2333333222 3354310 0 1111223332 37888888888889999999988
Q ss_pred EEE
Q 038188 335 MRD 337 (384)
Q Consensus 335 ~~~ 337 (384)
...
T Consensus 340 ~~~ 342 (376)
T 3q7m_A 340 FVA 342 (376)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 90
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=74.14 E-value=42 Score=28.85 Aligned_cols=185 Identities=10% Similarity=0.012 Sum_probs=94.8
Q ss_pred cceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEE
Q 038188 110 DGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAV 187 (384)
Q Consensus 110 ~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (384)
.+.+.+.. .+.+.++|+.|++....-..+. ... ++.+++..+ +-++.- .. ...+.+
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~---------~~~-~~~~s~dg~-~l~~~~----~~-------~~~i~~ 66 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGY---------DFV-DTAITSDCS-NVVVTS----DF-------CQTLVQ 66 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCC---------CEE-EEEECSSSC-EEEEEE----ST-------TCEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccC---------Ccc-eEEEcCCCC-EEEEEe----CC-------CCeEEE
Confidence 34444443 4688999999998855322211 122 566666433 322221 11 347888
Q ss_pred EEcCCCcc-ccccCCccccceeecCCcceEE--ECce-EEEEEeecCCCCcc--EEEEEEcCCceeee-ecCCCCCCCCc
Q 038188 188 YTSSTDSW-RVSKGNIKWIPYVFESYYNNAN--LNGV-FYWFVSRAGDFHSK--LILLFRISDEEFQE-IQRPCIPYTPF 260 (384)
Q Consensus 188 yss~t~~W-~~~~~~~~~~~~~~~~~~~~v~--~~G~-lywl~~~~~~~~~~--~il~fD~~~~~~~~-i~~P~~~~~~~ 260 (384)
|+..++.- ...- .. ......++. -+|. +| ... .... .|..+|+.+.+... ++... ..
T Consensus 67 ~d~~~~~~~~~~~------~~-~~~~~~~~~~s~dg~~l~-~~~----~~~~~~~i~v~d~~~~~~~~~~~~~~----~~ 130 (331)
T 3u4y_A 67 IETQLEPPKVVAI------QE-GQSSMADVDITPDDQFAV-TVT----GLNHPFNMQSYSFLKNKFISTIPIPY----DA 130 (331)
T ss_dssp EECSSSSCEEEEE------EE-CSSCCCCEEECTTSSEEE-ECC----CSSSSCEEEEEETTTTEEEEEEECCT----TE
T ss_pred EECCCCceeEEec------cc-CCCCccceEECCCCCEEE-Eec----CCCCcccEEEEECCCCCeEEEEECCC----Cc
Confidence 88887754 1110 00 001111122 2455 44 332 1123 89999998776533 34322 12
Q ss_pred eeEEEE-CCe-EEEEEecCCCCe-EEEEEEcC-CceeEE--EEeCCCCccccceEEEeCCE-EEEEE-eCCeEEEEECCC
Q 038188 261 ESLAPL-NGS-IALLHLDESNQY-IEIWVMNE-MNWIQQ--FAIGPFLGVKSPCGFWKNNA-VLMES-INGKLLLYDLVV 332 (384)
Q Consensus 261 ~~l~~~-~G~-L~l~~~~~~~~~-l~iW~l~~-~~W~~~--~~i~~~~~~~~~~~~~~~~~-il~~~-~~~~l~~yd~~t 332 (384)
..+... +|+ |++..... .. +.+|.++. ..-... ..+.... -..-+.+.++++ +++.. .++.+.+||+++
T Consensus 131 ~~~~~spdg~~l~~~~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 207 (331)
T 3u4y_A 131 VGIAISPNGNGLILIDRSS--ANTVRRFKIDADGVLFDTGQEFISGGT-RPFNITFTPDGNFAFVANLIGNSIGILETQN 207 (331)
T ss_dssp EEEEECTTSSCEEEEEETT--TTEEEEEEECTTCCEEEEEEEEECSSS-SEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cceEECCCCCEEEEEecCC--CceEEEEEECCCCcEeecCCccccCCC-CccceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 234443 565 66655543 45 99999876 222111 1222111 223455556665 55554 366799999998
Q ss_pred CeE
Q 038188 333 QEM 335 (384)
Q Consensus 333 ~~~ 335 (384)
++.
T Consensus 208 ~~~ 210 (331)
T 3u4y_A 208 PEN 210 (331)
T ss_dssp TTS
T ss_pred Ccc
Confidence 774
No 91
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=73.79 E-value=41 Score=28.54 Aligned_cols=31 Identities=13% Similarity=0.363 Sum_probs=23.8
Q ss_pred eeec-cccceEEEeeCCeEEEEccCccccccc
Q 038188 104 ELLG-PYDGIFCLCDGGLITLWNPATKECRTL 134 (384)
Q Consensus 104 ~~~~-s~~GLl~~~~~~~~~V~NP~T~~~~~L 134 (384)
.+++ |.+|+|-...++.+.|||..|++...+
T Consensus 29 ~~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~ 60 (318)
T 4ggc_A 29 NLVDWSSGNVLAVALDNSVYLWSASSGDILQL 60 (318)
T ss_dssp BCEEECTTSEEEEEETTEEEEEETTTCCEEEE
T ss_pred eEEEECCCCEEEEEeCCEEEEEECCCCCEEEE
Confidence 3444 678887776788999999999987654
No 92
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=73.71 E-value=27 Score=30.57 Aligned_cols=70 Identities=7% Similarity=0.152 Sum_probs=45.6
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEE-EEEEeCCeEEEEECCCCeEEEE
Q 038188 267 NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAV-LMESINGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~i-l~~~~~~~l~~yd~~t~~~~~v 338 (384)
+|++.++...+ ..+.||-++...|..+..+.....-..-+.+.+++.. +....++.+.+||+++++....
T Consensus 19 ~~~~l~~~~~d--~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 19 DRTQIAICPNN--HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp TSSEEEEECSS--SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCEEEEEeCC--CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee
Confidence 55555554444 7899999987767777776544422334555555554 4446677899999999875443
No 93
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=73.46 E-value=36 Score=33.52 Aligned_cols=111 Identities=15% Similarity=0.119 Sum_probs=61.2
Q ss_pred cceEEECceEEEEEeecCCCCccEEEEEEcCC--ceeeee-cCCCCC------CCCceeEEEECCeEEEEEecCCCCeEE
Q 038188 213 YNNANLNGVFYWFVSRAGDFHSKLILLFRISD--EEFQEI-QRPCIP------YTPFESLAPLNGSIALLHLDESNQYIE 283 (384)
Q Consensus 213 ~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~--~~~~~i-~~P~~~------~~~~~~l~~~~G~L~l~~~~~~~~~l~ 283 (384)
..++..+|.+|.... .+.+.++|..+ +.|+.- ..+... ......++..+|++++...+ ..
T Consensus 60 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~-- 128 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD---GR-- 128 (668)
T ss_dssp CCCEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT---SE--
T ss_pred cCCEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC---CE--
Confidence 357889999998764 67899999854 456642 222110 00112344567777665322 23
Q ss_pred EEEEc--C--CceeEEEEeCCC---CccccceEEEeCCEEEEEEe------CCeEEEEECCCCeEEE
Q 038188 284 IWVMN--E--MNWIQQFAIGPF---LGVKSPCGFWKNNAVLMESI------NGKLLLYDLVVQEMRD 337 (384)
Q Consensus 284 iW~l~--~--~~W~~~~~i~~~---~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~ 337 (384)
|..|+ . ..|..... .+. .....|+. .++.|++... ++.++.||.+|++...
T Consensus 129 l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 129 LIALDAKTGKAIWSQQTT-DPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp EEEEETTTCCEEEEEECS-CTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EEEEECCCCCEeeeeccC-CCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 33443 2 45665321 110 11123332 3677776643 3679999999987543
No 94
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=73.05 E-value=36 Score=29.60 Aligned_cols=110 Identities=10% Similarity=0.050 Sum_probs=61.8
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCC-----------------CCCceeEEEE--CCeEEEEEecCCC
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIP-----------------YTPFESLAPL--NGSIALLHLDESN 279 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~-----------------~~~~~~l~~~--~G~L~l~~~~~~~ 279 (384)
+|.++|.. ...+.|..||..+..+..+..+... ......++.. +|.|+++...
T Consensus 29 ~g~~l~v~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~--- 100 (322)
T 2fp8_A 29 TNKGFYTS-----VQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY--- 100 (322)
T ss_dssp TCSSEEEE-----CTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT---
T ss_pred CCCEEEEE-----cCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC---
Confidence 67888876 4468899999988777765433211 0112345554 5788887543
Q ss_pred CeEEEEEEcC--CceeEEEEeCCCCcc--ccceEEEe-CCEEEEEEeC------------------CeEEEEECCCCeEE
Q 038188 280 QYIEIWVMNE--MNWIQQFAIGPFLGV--KSPCGFWK-NNAVLMESIN------------------GKLLLYDLVVQEMR 336 (384)
Q Consensus 280 ~~l~iW~l~~--~~W~~~~~i~~~~~~--~~~~~~~~-~~~il~~~~~------------------~~l~~yd~~t~~~~ 336 (384)
.. |++++- .....+........+ ...+.+.. ++.+++.... +.++.||+++++++
T Consensus 101 ~~--i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 101 YH--LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TE--EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CC--EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 22 455543 222221111010111 22355566 7788776532 56999999988876
Q ss_pred EE
Q 038188 337 DL 338 (384)
Q Consensus 337 ~v 338 (384)
.+
T Consensus 179 ~~ 180 (322)
T 2fp8_A 179 LL 180 (322)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 95
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=72.28 E-value=48 Score=28.72 Aligned_cols=95 Identities=8% Similarity=-0.018 Sum_probs=54.5
Q ss_pred ccEEEEEEcCCceeeee----cCCCCCCCCceeEEEE-CCe-EEEEEecCCCCeEEEEEEcC---CceeEEEEeCCCCcc
Q 038188 234 SKLILLFRISDEEFQEI----QRPCIPYTPFESLAPL-NGS-IALLHLDESNQYIEIWVMNE---MNWIQQFAIGPFLGV 304 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i----~~P~~~~~~~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l~~---~~W~~~~~i~~~~~~ 304 (384)
.+.|..||..+.+...+ ..|. .++.. +|+ |++..... .++.++-++. ........ .+.
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~~p~-------gia~~~dg~~lyv~d~~~--~~I~~~~~~~~~~~~~~~~~~---~~g- 230 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELHVPG-------GAEVSADSSFVLVAEFLS--HQIVKYWLEGPKKGTAEVLVK---IPN- 230 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEESCCC-------EEEECTTSSEEEEEEGGG--TEEEEEESSSTTTTCEEEEEE---CSS-
T ss_pred CceEEEEeCCCCEEEEeccCCccCc-------ceEECCCCCEEEEEeCCC--CeEEEEECCCCcCCccceEEe---CCC-
Confidence 36799999987766543 2231 23443 454 77765543 5555555543 23333222 121
Q ss_pred ccceEEEeCCEEEEEEeC-----------CeEEEEECCCCeEEEEeec
Q 038188 305 KSPCGFWKNNAVLMESIN-----------GKLLLYDLVVQEMRDLGRF 341 (384)
Q Consensus 305 ~~~~~~~~~~~il~~~~~-----------~~l~~yd~~t~~~~~v~~~ 341 (384)
..-+.+..++.|++.... ..++.||++.+.++.+...
T Consensus 231 P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECC
T ss_pred CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECC
Confidence 222444456777766532 5699999988878777654
No 96
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=71.99 E-value=61 Score=29.82 Aligned_cols=110 Identities=12% Similarity=0.113 Sum_probs=63.6
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCe-EEEEEecCCC-CeEEEEEEcCCceeEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGS-IALLHLDESN-QYIEIWVMNEMNWIQQ 295 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~-L~l~~~~~~~-~~l~iW~l~~~~W~~~ 295 (384)
+|.||+... .+.|..||+++.....+..+ ......+... +|+ |++....... ....+|...+..|...
T Consensus 149 ~g~Lyv~d~------~~~I~~id~~~~~v~~~~~~---~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~ 219 (430)
T 3tc9_A 149 HNHLYLVGE------QHPTRLIDFEKEYVSTVYSG---LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVI 219 (430)
T ss_dssp EEEEEEEEB------TEEEEEEETTTTEEEEEECC---CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSE
T ss_pred CCeEEEEeC------CCcEEEEECCCCEEEEEecC---CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeee
Confidence 388988763 28999999999887765321 1223344443 565 7777654322 3344555555445422
Q ss_pred EEeCCCCccccceEEEe-CCEEEEEE-eCCeEEEEECCCCeEEEE
Q 038188 296 FAIGPFLGVKSPCGFWK-NNAVLMES-INGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 296 ~~i~~~~~~~~~~~~~~-~~~il~~~-~~~~l~~yd~~t~~~~~v 338 (384)
..+.... -..-+++.+ ++.|++.. ..++++.||+++++...+
T Consensus 220 ~~l~~~~-~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 220 TELTKGQ-NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp EEEEECS-SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eeeccCC-CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 2222111 123344555 67777765 456799999998876433
No 97
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=71.66 E-value=48 Score=28.47 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=54.2
Q ss_pred ccEEEEEEcCC-ce--eeeecCCCCCCCCceeEEEE--CCeEEEEEecCCCCeEEEEEEcCC--c--eeEEEEeCCCCc-
Q 038188 234 SKLILLFRISD-EE--FQEIQRPCIPYTPFESLAPL--NGSIALLHLDESNQYIEIWVMNEM--N--WIQQFAIGPFLG- 303 (384)
Q Consensus 234 ~~~il~fD~~~-~~--~~~i~~P~~~~~~~~~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~--~--W~~~~~i~~~~~- 303 (384)
.+.|..+|+.+ .. ......+.. ..-..+... +|++.++...+ ..+.||.++.. . ......+.....
T Consensus 169 d~~i~i~d~~~~~~~~~~~~~~~~~--~~i~~i~~~~~~~~~l~~~~~d--g~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T 1yfq_A 169 NSQVQWFRLPLCEDDNGTIEESGLK--YQIRDVALLPKEQEGYACSSID--GRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244 (342)
T ss_dssp TTEEEEEESSCCTTCCCEEEECSCS--SCEEEEEECSGGGCEEEEEETT--SEEEEEECCTTCCSTTCTTCEEEECCCCC
T ss_pred CCeEEEEECCccccccceeeecCCC--CceeEEEECCCCCCEEEEEecC--CcEEEEEEcCCCcccccccceeeeccccc
Confidence 67888899887 32 332322211 122233333 46666666555 89999998652 1 223333332211
Q ss_pred --------cccceEEEeCCEEEE-EEeCCeEEEEECCCCeEE
Q 038188 304 --------VKSPCGFWKNNAVLM-ESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 304 --------~~~~~~~~~~~~il~-~~~~~~l~~yd~~t~~~~ 336 (384)
....+.+.+++..++ ...++.+.+||+++++..
T Consensus 245 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp TTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred ccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 122334445555444 456778999999988753
No 98
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=71.53 E-value=48 Score=28.40 Aligned_cols=93 Identities=9% Similarity=0.086 Sum_probs=45.6
Q ss_pred ccEEEEEEcCCceeee-ecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCC---------CCc
Q 038188 234 SKLILLFRISDEEFQE-IQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGP---------FLG 303 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~-i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~---------~~~ 303 (384)
.+.|..+|+.+..-.. +.... .-..+....+...++...+ ..+.||-++.. ..+..+.. ...
T Consensus 236 Dg~i~iwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~d--~~i~iwd~~~~--~~~~~~~~~~~~~~~~~h~~ 307 (340)
T 4aow_A 236 DGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCAATG--PSIKIWDLEGK--IIVDELKQEVISTSSKAEPP 307 (340)
T ss_dssp TCEEEEEETTTTEEEEEEECSS----CEEEEEECSSSSEEEEEET--TEEEEEETTTT--EEEEEECCC-------CCCC
T ss_pred CCeEEEEEeccCceeeeecCCc----eEEeeecCCCCceeeccCC--CEEEEEECCCC--eEEEeccccceeeeccCCCC
Confidence 5677788887654322 22221 1112222333333333333 68888877651 11122211 111
Q ss_pred cccceEEEeCCEEEEE-EeCCeEEEEECCCCe
Q 038188 304 VKSPCGFWKNNAVLME-SINGKLLLYDLVVQE 334 (384)
Q Consensus 304 ~~~~~~~~~~~~il~~-~~~~~l~~yd~~t~~ 334 (384)
-..-+.+.+++..++. ..++.+.+||++|++
T Consensus 308 ~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 308 QCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 1122445556666555 557789999999875
No 99
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=70.85 E-value=62 Score=29.41 Aligned_cols=188 Identities=7% Similarity=-0.044 Sum_probs=95.7
Q ss_pred cceEEEeeCCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEE
Q 038188 110 DGIFCLCDGGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYT 189 (384)
Q Consensus 110 ~GLl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (384)
..+|++.+...+...++.+++...+-... ....++.+|+..+.-.+.-. . ...+..++
T Consensus 83 ~~~ll~~~~~~I~~i~l~~~~~~~~~~~~----------~~~~~l~~d~~~~~lywsD~----~--------~~~I~~~~ 140 (400)
T 3p5b_L 83 IAYLFFTNRHEVRKMTLDRSEYTSLIPNL----------RNVVALDTEVASNRIYWSDL----S--------QRMICSTQ 140 (400)
T ss_dssp SCEEEEEETTEEEEECTTSCSCEEEECSC----------SCEEEEEEETTTTEEEEEET----T--------TTEEEEEE
T ss_pred cceeEEeccceeEEEccCCcceeEecccc----------CcceEEeeeeccCceEEEec----C--------CCeEEEEE
Confidence 45677777788888888777665542211 24567888876553222111 0 23455555
Q ss_pred cCCCc----cccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCcee
Q 038188 190 SSTDS----WRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFES 262 (384)
Q Consensus 190 s~t~~----W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~ 262 (384)
..+.. ...+-.. .+ ....++.+ +|.|||.. ...+.|..+|++...-..+-. ... .....
T Consensus 141 ~~g~~~~~~~~~~~~~--~~-----~~p~glavD~~~~~lY~~d-----~~~~~I~~~~~~g~~~~~l~~-~~~-~~P~~ 206 (400)
T 3p5b_L 141 LDRAHGVSSYDTVISR--DI-----QAPDGLAVDWIHSNIYWTD-----SVLGTVSVADTKGVKRKTLFR-ENG-SKPRA 206 (400)
T ss_dssp C------CCCEEEECS--SC-----SCEEEEEEETTTTEEEEEE-----TTTTEEEEECTTTCSEEEEEE-CSS-CCEEE
T ss_pred cccCCCCCcceEEEeC--CC-----CCcccEEEEecCCceEEEE-----CCCCeEEEEeCCCCceEEEEe-CCC-CCcce
Confidence 54311 1111110 00 01123443 68999987 446789999998765444311 111 11234
Q ss_pred EEE--ECCeEEEEEecCCCCeEEEEEEcC-CceeEEEEeCCCCccccceE--EE-eCCEEEEEEe-CCeEEEEECCCCeE
Q 038188 263 LAP--LNGSIALLHLDESNQYIEIWVMNE-MNWIQQFAIGPFLGVKSPCG--FW-KNNAVLMESI-NGKLLLYDLVVQEM 335 (384)
Q Consensus 263 l~~--~~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~--~~-~~~~il~~~~-~~~l~~yd~~t~~~ 335 (384)
|++ .+|.||+..... ... |++.+- .+-.+.. +. ..+..|-+ +. .++.|++... ...+..+|++....
T Consensus 207 iavdp~~g~ly~td~~~-~~~--I~~~~~dG~~~~~~-~~--~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 207 IVVDPVHGFMYWTDWGT-PAK--IKKGGLNGVDIYSL-VT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 280 (400)
T ss_dssp EEEETTTTEEEEEECSS-SCC--EEEEETTSCSCEEE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC
T ss_pred EEEecccCeEEEEeCCC-CCE--EEEEeCCCCccEEE-EE--CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc
Confidence 454 367888876532 133 444432 2222211 11 12334544 44 3567777643 45788888887666
Q ss_pred EEEe
Q 038188 336 RDLG 339 (384)
Q Consensus 336 ~~v~ 339 (384)
+.+.
T Consensus 281 ~~~~ 284 (400)
T 3p5b_L 281 KTIL 284 (400)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 100
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=70.72 E-value=53 Score=29.52 Aligned_cols=110 Identities=5% Similarity=-0.004 Sum_probs=60.6
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeee-cCCCCC-CCCce-eEEE-ECCeEEEEEecCCCCeEEEEEEcCCceeE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEI-QRPCIP-YTPFE-SLAP-LNGSIALLHLDESNQYIEIWVMNEMNWIQ 294 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~-~~~~~-~l~~-~~G~L~l~~~~~~~~~l~iW~l~~~~W~~ 294 (384)
+|.++... ...+.|..+|+.+.+.... +.+... ..... .+.. -+|++++....+ ..+.+|-++... .
T Consensus 133 ~~~~~~~~-----~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d--~~v~~~d~~~~~--~ 203 (433)
T 3bws_A 133 NTRLAIPL-----LEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA--NAVHVFDLKTLA--Y 203 (433)
T ss_dssp SSEEEEEB-----TTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG--TEEEEEETTTCC--E
T ss_pred CCeEEEEe-----CCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC--CEEEEEECCCce--E
Confidence 45555544 3355689999987766542 221110 11122 2222 267777766655 789999887522 2
Q ss_pred EEEeCCCCccccceEEEeCCE-EEEEE-eCCeEEEEECCCCeEEE
Q 038188 295 QFAIGPFLGVKSPCGFWKNNA-VLMES-INGKLLLYDLVVQEMRD 337 (384)
Q Consensus 295 ~~~i~~~~~~~~~~~~~~~~~-il~~~-~~~~l~~yd~~t~~~~~ 337 (384)
+.++........-+.+.+++. +++.. .++.+..||+++++...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 204 KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 233322221223345555554 44444 46789999999887543
No 101
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=70.38 E-value=80 Score=31.41 Aligned_cols=97 Identities=16% Similarity=0.190 Sum_probs=58.3
Q ss_pred ccEEEEEEcCCceeeee-cCCCCCCCCceeEEEE-C--CeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceE
Q 038188 234 SKLILLFRISDEEFQEI-QRPCIPYTPFESLAPL-N--GSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCG 309 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~-~--G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~ 309 (384)
.+.|..+|+.++....+ .+.... ..-..+... + |.+.+....+ ..+.+|-++...|.....+.....-..-+.
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~~~l~s~s~D--g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~ 106 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTGHE-GPVWRVDWAHPKFGTILASCSYD--GKVLIWKEENGRWSQIAVHAVHSASVNSVQ 106 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECCCS-SCEEEEEECCTTSCSEEEEEETT--SCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred CCcEEEEecCCCCCccceeccCCc-CceEEEEecCCCCCCEEEEEeCC--CeEEEEECCCCcccccccccCCCCCeEEEE
Confidence 56677777776555543 222111 122233332 2 6666666555 789999998877877777654442233344
Q ss_pred EEeC--CE-EEEEEeCCeEEEEECCCC
Q 038188 310 FWKN--NA-VLMESINGKLLLYDLVVQ 333 (384)
Q Consensus 310 ~~~~--~~-il~~~~~~~l~~yd~~t~ 333 (384)
+.++ +. ++....++.+.+||++++
T Consensus 107 ~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 107 WAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp ECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred ECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 4444 44 455566788999999887
No 102
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=69.94 E-value=61 Score=28.93 Aligned_cols=147 Identities=10% Similarity=0.083 Sum_probs=73.0
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeee-ecCCCCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQE-IQRPCIPYT 258 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~ 258 (384)
...+.+|+.+++.....-..... . ..-.++.+ +|.....+ ...+.|..+|+.+.+... +.... ...
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~l~~~-----~~d~~i~iwd~~~~~~~~~~~~~~-~~~ 221 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVH-P----DTIYSVDWSRDGALICTS-----CRDKRVRVIEPRKGTVVAEKDRPH-EGT 221 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTC-C----SCEEEEEECTTSSCEEEE-----ETTSEEEEEETTTTEEEEEEECSS-CSS
T ss_pred CCEEEEEECCCCCccEEEecCCC-C----CceEEEEECCCCCEEEEE-----ecCCcEEEEeCCCCceeeeeccCC-CCC
Confidence 45688888887654321100000 0 00012222 45544444 236788999998765433 21111 111
Q ss_pred CceeEEE-ECCeEEEEEec-CCCCeEEEEEEcC-CceeEEEEeCCCCccccceEEEeCCEEE-EEE-eCCeEEEEECCCC
Q 038188 259 PFESLAP-LNGSIALLHLD-ESNQYIEIWVMNE-MNWIQQFAIGPFLGVKSPCGFWKNNAVL-MES-INGKLLLYDLVVQ 333 (384)
Q Consensus 259 ~~~~l~~-~~G~L~l~~~~-~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~il-~~~-~~~~l~~yd~~t~ 333 (384)
....+.. -+|++.++... .....+.+|-+.. ..=.....+.... -...+.+..++..+ +.. .++.+.+||++++
T Consensus 222 ~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 222 RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSS-GVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCS-SCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred cceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCC-ceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 1223333 36665555421 2348999999876 2212223332211 12223445555554 444 4678999999998
Q ss_pred e--EEEEee
Q 038188 334 E--MRDLGR 340 (384)
Q Consensus 334 ~--~~~v~~ 340 (384)
+ ++.+..
T Consensus 301 ~~~~~~l~~ 309 (402)
T 2aq5_A 301 APFLHYLSM 309 (402)
T ss_dssp TTCEEEEEE
T ss_pred CcceEeecc
Confidence 7 655544
No 103
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=69.89 E-value=48 Score=31.95 Aligned_cols=113 Identities=14% Similarity=0.158 Sum_probs=61.6
Q ss_pred cceEEECceEEEEEeecCCCCccEEEEEEc-CC--ceeeee-cCCCCC------CCCceeEEEECCeEEEEEecCCCCeE
Q 038188 213 YNNANLNGVFYWFVSRAGDFHSKLILLFRI-SD--EEFQEI-QRPCIP------YTPFESLAPLNGSIALLHLDESNQYI 282 (384)
Q Consensus 213 ~~~v~~~G~lywl~~~~~~~~~~~il~fD~-~~--~~~~~i-~~P~~~------~~~~~~l~~~~G~L~l~~~~~~~~~l 282 (384)
..++..+|.+|.... ..+.+.++|. .+ +.|+.- ..+... ......++..+|+|++...+ .
T Consensus 56 ~~P~v~~g~vyv~~~-----~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g-- 125 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSA-----FPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN---G-- 125 (571)
T ss_dssp SCCEEETTEEEEECS-----TTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT---S--
T ss_pred cccEEECCEEEEEeC-----CCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC---C--
Confidence 357889999998752 1467999998 54 456542 221100 01112345567777765432 2
Q ss_pred EEEEEcC----CceeEEEEeCC--CCccccceEEEeCCEEEEEEe------CCeEEEEECCCCeEEE
Q 038188 283 EIWVMNE----MNWIQQFAIGP--FLGVKSPCGFWKNNAVLMESI------NGKLLLYDLVVQEMRD 337 (384)
Q Consensus 283 ~iW~l~~----~~W~~~~~i~~--~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~ 337 (384)
.+..|+- ..|.....-.. ......|+. .++.|++... ++.++.||.+|++...
T Consensus 126 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred EEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 3444442 35664321000 011123332 2677877654 5789999999987554
No 104
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=69.83 E-value=57 Score=28.55 Aligned_cols=100 Identities=10% Similarity=0.150 Sum_probs=54.3
Q ss_pred ccEEEEEEcCCceeeee-cCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcC-CceeEEEEeCCCCccccceEE
Q 038188 234 SKLILLFRISDEEFQEI-QRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNE-MNWIQQFAIGPFLGVKSPCGF 310 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~ 310 (384)
...|..+|..+..+..+ .+.... ..-..+... +|++.+....+ ..+.||-++. ..+..+..+........-+.+
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~-~~v~~v~~sp~~~~l~s~s~D--~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHE-NEVKSVAWAPSGNLLATCSRD--KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCS-SCEEEEEECTTSSEEEEEETT--SCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred CCcEEEEEccCCCeEEEEEccCCC-CCceEEEEeCCCCEEEEEECC--CeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 44566667666655432 222111 112223333 56665555555 7899999987 556555555443322233444
Q ss_pred EeCCEEEE-EEeCCeEEEEECCCCeEE
Q 038188 311 WKNNAVLM-ESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 311 ~~~~~il~-~~~~~~l~~yd~~t~~~~ 336 (384)
.+++.+++ ...++.+.+||.+++++.
T Consensus 159 ~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 159 HPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp CSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred CCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 45555444 455677888888887654
No 105
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=69.82 E-value=51 Score=28.06 Aligned_cols=101 Identities=11% Similarity=0.101 Sum_probs=53.3
Q ss_pred ccEEEEEEcCCcee----eeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccce
Q 038188 234 SKLILLFRISDEEF----QEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPC 308 (384)
Q Consensus 234 ~~~il~fD~~~~~~----~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~ 308 (384)
.+.|..+|+.+... ..+...... ..-..+... +|++.++...+ ..+.+|-++.........+........-+
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d--~~i~~~d~~~~~~~~~~~~~~~~~~i~~~ 147 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRD-NYIRSCKLLPDGCTLIVGGEA--STLSIWDLAAPTPRIKAELTSSAPACYAL 147 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTT-SBEEEEEECTTSSEEEEEESS--SEEEEEECCCC--EEEEEEECSSSCEEEE
T ss_pred CCeEEEEECCCCCceeeeecccccCCC-CcEEEEEEcCCCCEEEEEcCC--CcEEEEECCCCCcceeeecccCCCceEEE
Confidence 56777777765432 112211111 111223333 56655555544 78999998875544444443332122334
Q ss_pred EEEeCCE-EEEEEeCCeEEEEECCCCeEEE
Q 038188 309 GFWKNNA-VLMESINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 309 ~~~~~~~-il~~~~~~~l~~yd~~t~~~~~ 337 (384)
.+.+++. ++....++.+.+||+++++...
T Consensus 148 ~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 148 AISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 4444554 4555667789999999886543
No 106
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=69.79 E-value=31 Score=34.08 Aligned_cols=114 Identities=14% Similarity=0.066 Sum_probs=61.6
Q ss_pred cceEEECceEEEEEeecCCCCccEEEEEEcCCc--eeeee-cCCCCC------CCCceeEEEECCeEEEEEecCCCCeEE
Q 038188 213 YNNANLNGVFYWFVSRAGDFHSKLILLFRISDE--EFQEI-QRPCIP------YTPFESLAPLNGSIALLHLDESNQYIE 283 (384)
Q Consensus 213 ~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~--~~~~i-~~P~~~------~~~~~~l~~~~G~L~l~~~~~~~~~l~ 283 (384)
..++..+|.+|.... .+.|.++|..+. .|+.- ..+... ......++..+|+|++...+ ..+.
T Consensus 71 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d---g~l~ 141 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD---GRLI 141 (677)
T ss_dssp CCCEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT---SEEE
T ss_pred eCCEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC---CEEE
Confidence 357889999998763 678999998654 55542 222100 01122345567777765322 2333
Q ss_pred EEEEcC--CceeEEEEeCC---CCccccceEEEeCCEEEEEEe------CCeEEEEECCCCeEEE
Q 038188 284 IWVMNE--MNWIQQFAIGP---FLGVKSPCGFWKNNAVLMESI------NGKLLLYDLVVQEMRD 337 (384)
Q Consensus 284 iW~l~~--~~W~~~~~i~~---~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~ 337 (384)
.+-.+. ..|......+. ......|+. .++.|++... ++.++.||.+|++...
T Consensus 142 alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 142 ALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp EEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 322222 44655311010 011123332 2677777654 4679999999988653
No 107
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=69.39 E-value=55 Score=28.21 Aligned_cols=96 Identities=11% Similarity=0.187 Sum_probs=49.7
Q ss_pred ccEEEEEEcCCce--eeeecCCCCCCC-CceeEE-----EECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccc
Q 038188 234 SKLILLFRISDEE--FQEIQRPCIPYT-PFESLA-----PLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVK 305 (384)
Q Consensus 234 ~~~il~fD~~~~~--~~~i~~P~~~~~-~~~~l~-----~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~ 305 (384)
.+.|..+|+.+.. ...+..+..... .-..+. ..+|.+.++...+ ..+.+|-++... ...... ...-.
T Consensus 138 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~--~~~~~~-~~~~v 212 (357)
T 3i2n_A 138 DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN--GDIKLFDLRNMA--LRWETN-IKNGV 212 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT--SEEEEEETTTTE--EEEEEE-CSSCE
T ss_pred CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC--CeEEEEECccCc--eeeecC-CCCce
Confidence 6678889988764 333443322111 111222 1466666666555 789999887621 111111 11112
Q ss_pred cceEEEe---C-CEEEEEEeCCeEEEEECCCCe
Q 038188 306 SPCGFWK---N-NAVLMESINGKLLLYDLVVQE 334 (384)
Q Consensus 306 ~~~~~~~---~-~~il~~~~~~~l~~yd~~t~~ 334 (384)
.-+.+.+ + +.++....++.+.+||+++++
T Consensus 213 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 213 CSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred EEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 2233443 3 445555667788888887643
No 108
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=69.36 E-value=56 Score=28.26 Aligned_cols=63 Identities=8% Similarity=0.109 Sum_probs=35.9
Q ss_pred CeEEEEEecCCCCeEEEEEEcC-C-ceeEEEEeCCC--CccccceEEEeCCEEEE-EEeCCeEEEEECCC
Q 038188 268 GSIALLHLDESNQYIEIWVMNE-M-NWIQQFAIGPF--LGVKSPCGFWKNNAVLM-ESINGKLLLYDLVV 332 (384)
Q Consensus 268 G~L~l~~~~~~~~~l~iW~l~~-~-~W~~~~~i~~~--~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~t 332 (384)
|++.++...+ ..+.+|-++. . .......+... .....-+.+..++..++ ...++.+.+||+.+
T Consensus 299 ~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQV--GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECTT--SCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEecC--CcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 6665555544 7899999987 2 22233444432 11223344555665544 46678899999864
No 109
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=68.69 E-value=55 Score=27.99 Aligned_cols=110 Identities=8% Similarity=0.072 Sum_probs=58.9
Q ss_pred Cce-EEEEEeecCCCCccEEEEEEcC--Cceeeee-cCCCCCCCCceeEEEE-CCe-EEEEEecCCCCeEEEEEEcC-Cc
Q 038188 219 NGV-FYWFVSRAGDFHSKLILLFRIS--DEEFQEI-QRPCIPYTPFESLAPL-NGS-IALLHLDESNQYIEIWVMNE-MN 291 (384)
Q Consensus 219 ~G~-lywl~~~~~~~~~~~il~fD~~--~~~~~~i-~~P~~~~~~~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l~~-~~ 291 (384)
+|. +|... ...+.|..||+. +.++..+ .++.. .....+... +|+ |++..... ..+.+|-+++ ..
T Consensus 48 dg~~l~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~--~~i~~~d~~~~~~ 118 (343)
T 1ri6_A 48 DKRYLYVGV-----RPEFRVLAYRIAPDDGALTFAAESALP--GSLTHISTDHQGQFVFVGSYNA--GNVSVTRLEDGLP 118 (343)
T ss_dssp TSSEEEEEE-----TTTTEEEEEEECTTTCCEEEEEEEECS--SCCSEEEECTTSSEEEEEETTT--TEEEEEEEETTEE
T ss_pred CCCEEEEee-----cCCCeEEEEEecCCCCceeeccccccC--CCCcEEEEcCCCCEEEEEecCC--CeEEEEECCCCcc
Confidence 565 55444 223678887776 6666543 22211 122233333 565 44444333 7899998854 22
Q ss_pred eeEEEEeCCCCccccceEEEeCCE-EEEEE-eCCeEEEEECCC-CeEEEE
Q 038188 292 WIQQFAIGPFLGVKSPCGFWKNNA-VLMES-INGKLLLYDLVV-QEMRDL 338 (384)
Q Consensus 292 W~~~~~i~~~~~~~~~~~~~~~~~-il~~~-~~~~l~~yd~~t-~~~~~v 338 (384)
......+.... ....+.+.+++. +++.. .++.+..||+.+ +++..+
T Consensus 119 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 119 VGVVDVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp EEEEEEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred ccccccccCCC-CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeee
Confidence 33334443222 233355555654 55555 567899999988 766543
No 110
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=68.42 E-value=60 Score=28.24 Aligned_cols=163 Identities=12% Similarity=0.118 Sum_probs=77.2
Q ss_pred cccceEEEeeC---CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccE
Q 038188 108 PYDGIFCLCDG---GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAH 184 (384)
Q Consensus 108 s~~GLl~~~~~---~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (384)
+.+|.+.+.+. .++.++|+..+....+..................++.+|+..+..-|.. . ...+
T Consensus 152 ~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d------~------~~~~ 219 (329)
T 3fvz_A 152 PSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD------R------ENGR 219 (329)
T ss_dssp TTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE------T------TTTE
T ss_pred CCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE------C------CCCE
Confidence 33777766662 4678888654433334321110000000112345677777544322221 1 1567
Q ss_pred EEEEEcCCCccccccCCcc--ccceee-cCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCC-CCCc
Q 038188 185 VAVYTSSTDSWRVSKGNIK--WIPYVF-ESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIP-YTPF 260 (384)
Q Consensus 185 ~~vyss~t~~W~~~~~~~~--~~~~~~-~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~-~~~~ 260 (384)
+.+|+..++.....-.... ..+... ..+...+..+|.+|... .....|..+|+.+.+....--+... ...-
T Consensus 220 I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~-----~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p 294 (329)
T 3fvz_A 220 IQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGD-----QEPVQGFVMNFSSGEIIDVFKPVRKHFDMP 294 (329)
T ss_dssp EEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTC-----SCCCCEEEEETTTCCEEEEECCSSSCCSSE
T ss_pred EEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEecc-----CCCcEEEEEEcCCCeEEEEEcCCCCccCCe
Confidence 8899988665533211100 011110 01112223344433221 3456889999877766543111111 1222
Q ss_pred eeEEEE-CCeEEEEEecCCCCeEEEEEEcC
Q 038188 261 ESLAPL-NGSIALLHLDESNQYIEIWVMNE 289 (384)
Q Consensus 261 ~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~ 289 (384)
..++.. +|.|++..... .++.+|.++.
T Consensus 295 ~~ia~~~dG~lyvad~~~--~~I~~~~~~~ 322 (329)
T 3fvz_A 295 HDIVASEDGTVYIGDAHT--NTVWKFTLTE 322 (329)
T ss_dssp EEEEECTTSEEEEEESSS--CCEEEEEEEE
T ss_pred eEEEECCCCCEEEEECCC--CEEEEEeCCc
Confidence 344443 67788877655 7888888764
No 111
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=68.18 E-value=70 Score=29.00 Aligned_cols=183 Identities=10% Similarity=0.076 Sum_probs=92.3
Q ss_pred eEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCcccccc
Q 038188 120 LITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRVSK 199 (384)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 199 (384)
.++++|..|++...+...+. ....+.+.|. +.+-++.. . .+ ....+.+++..++..+.+.
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~----------~~~~~~~spd-g~~la~~~-~--~~------g~~~i~~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR----------HNGAPAFSPD-GSKLAFAL-S--KT------GSLNLYVMDLASGQIRQVT 263 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS----------CEEEEEECTT-SSEEEEEE-C--TT------SSCEEEEEETTTCCEEECC
T ss_pred EEEEEECCCCcEEEeecCCC----------cccCEEEcCC-CCEEEEEE-e--cC------CCceEEEEECCCCCEEeCc
Confidence 79999999998876643321 2233445553 23322221 1 11 1456888888887665443
Q ss_pred CCccccceeecCCcceEEE--Cce-EEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEE-ECCe-EEEEE
Q 038188 200 GNIKWIPYVFESYYNNANL--NGV-FYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAP-LNGS-IALLH 274 (384)
Q Consensus 200 ~~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~G~-L~l~~ 274 (384)
.... .. ..+.. +|. +++...+ .....|..+|+.+.....+.... .....+.. -+|+ |+...
T Consensus 264 ~~~~--~~------~~~~~spdg~~l~~~s~~---~g~~~i~~~d~~~~~~~~l~~~~---~~~~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 264 DGRS--NN------TEPTWFPDSQNLAFTSDQ---AGRPQVYKVNINGGAPQRITWEG---SQNQDADVSSDGKFMVMVS 329 (415)
T ss_dssp CCSS--CE------EEEEECTTSSEEEEEECT---TSSCEEEEEETTSSCCEECCCSS---SEEEEEEECTTSSEEEEEE
T ss_pred CCCC--cc------cceEECCCCCEEEEEECC---CCCcEEEEEECCCCCEEEEecCC---CcccCeEECCCCCEEEEEE
Confidence 2210 00 11221 565 4444321 22347888999887654443221 11122333 2665 44444
Q ss_pred ecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE-EEEEEeCC---eEEEEECCCCeEEEEee
Q 038188 275 LDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA-VLMESING---KLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 275 ~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~~---~l~~yd~~t~~~~~v~~ 340 (384)
.+.....+.+|-++..... .+.... ....+.+.+++. |++...++ .++.+|++++..+.+..
T Consensus 330 ~~~g~~~i~~~d~~~~~~~---~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 330 SNGGQQHIAKQDLATGGVQ---VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp ECSSCEEEEEEETTTCCEE---ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred CcCCceEEEEEECCCCCEE---EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 4432245666655543332 222222 122334555655 55554433 69999999988877654
No 112
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=67.25 E-value=58 Score=27.67 Aligned_cols=65 Identities=17% Similarity=0.259 Sum_probs=43.1
Q ss_pred CeEEEEEecCCCCeEEEEEEcC-------CceeEEEEeCCCCccccceEEEeC--CE-EEEEEeCCeEEEEECCCCe
Q 038188 268 GSIALLHLDESNQYIEIWVMNE-------MNWIQQFAIGPFLGVKSPCGFWKN--NA-VLMESINGKLLLYDLVVQE 334 (384)
Q Consensus 268 G~L~l~~~~~~~~~l~iW~l~~-------~~W~~~~~i~~~~~~~~~~~~~~~--~~-il~~~~~~~l~~yd~~t~~ 334 (384)
|.+.+....+ ..+.||-++. ..|.....+........-+.+.++ +. ++....++.+.+||+++++
T Consensus 71 ~~~l~s~~~d--g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 71 GRIIASASYD--KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CSEEEEEETT--SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred CCEEEEEcCC--CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 6666666555 7899999976 457777776544422334445544 55 4455667889999998765
No 113
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=67.09 E-value=46 Score=32.92 Aligned_cols=113 Identities=14% Similarity=0.061 Sum_probs=61.7
Q ss_pred cceEEECceEEEEEeecCCCCccEEEEEEcC--Cceeeee-cCCCCC------CCCceeEEEECCeEEEEEecCCCCeEE
Q 038188 213 YNNANLNGVFYWFVSRAGDFHSKLILLFRIS--DEEFQEI-QRPCIP------YTPFESLAPLNGSIALLHLDESNQYIE 283 (384)
Q Consensus 213 ~~~v~~~G~lywl~~~~~~~~~~~il~fD~~--~~~~~~i-~~P~~~------~~~~~~l~~~~G~L~l~~~~~~~~~l~ 283 (384)
..++..+|.+|.... .+.+.++|.. ++.|+.- ..+... ......++..+|+|++...+ ..+.
T Consensus 64 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d---g~l~ 134 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD---GRLE 134 (689)
T ss_dssp CCCEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT---SEEE
T ss_pred ecCEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC---CEEE
Confidence 357889999998753 5679999985 4566642 222110 01112345567777665422 3333
Q ss_pred EEEEcC--CceeEEEEeCCCC---ccccceEEEeCCEEEEEEe------CCeEEEEECCCCeEE
Q 038188 284 IWVMNE--MNWIQQFAIGPFL---GVKSPCGFWKNNAVLMESI------NGKLLLYDLVVQEMR 336 (384)
Q Consensus 284 iW~l~~--~~W~~~~~i~~~~---~~~~~~~~~~~~~il~~~~------~~~l~~yd~~t~~~~ 336 (384)
.+-.+. ..|......++.. ....|+. .++.|++... ++.++.||.+|++..
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 135 AIDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp EEETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 322222 4566543212111 1123432 2677777543 467999999998854
No 114
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=67.02 E-value=59 Score=27.67 Aligned_cols=140 Identities=7% Similarity=0.051 Sum_probs=70.8
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeee-ecCCCCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQE-IQRPCIPYT 258 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~ 258 (384)
.-.+.+|+.+++............. .-..+.+ +|....... ..+.|..+|+.+.+... +.... .
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~-----~dg~v~~~d~~~~~~~~~~~~~~---~ 184 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSSAP-----ACYALAISPDSKVCFSCC-----SDGNIAVWDLHNQTLVRQFQGHT---D 184 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECSSS-----CEEEEEECTTSSEEEEEE-----TTSCEEEEETTTTEEEEEECCCS---S
T ss_pred CCcEEEEECCCCCcceeeecccCCC-----ceEEEEECCCCCEEEEEe-----CCCcEEEEeCCCCceeeeeeccc---C
Confidence 4578889888876443221100000 0011222 455444442 35678889987765432 33221 1
Q ss_pred CceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE-EEEEEeCCeEEEEECCCCeEE
Q 038188 259 PFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA-VLMESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 259 ~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~~~l~~yd~~t~~~~ 336 (384)
.-..+... +|...++...+ ..+.+|-++.. ..+..+.... -..-+.+.+++. ++....++.+.+||+++++..
T Consensus 185 ~i~~~~~~~~~~~l~~~~~d--g~i~~~d~~~~--~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLD--NTVRSWDLREG--RQLQQHDFTS-QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY 259 (337)
T ss_dssp CEEEEEECTTSSEEEEEETT--SEEEEEETTTT--EEEEEEECSS-CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE
T ss_pred ceEEEEECCCCCEEEEEecC--CcEEEEECCCC--ceEeeecCCC-ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE
Confidence 12233333 56665555544 78999988752 2222222111 122334444554 445566778999999998765
Q ss_pred EEe
Q 038188 337 DLG 339 (384)
Q Consensus 337 ~v~ 339 (384)
.+.
T Consensus 260 ~~~ 262 (337)
T 1gxr_A 260 QLH 262 (337)
T ss_dssp EEC
T ss_pred EEc
Confidence 543
No 115
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=66.94 E-value=74 Score=29.30 Aligned_cols=112 Identities=9% Similarity=0.169 Sum_probs=61.4
Q ss_pred ceEEEC-----ceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEE
Q 038188 214 NNANLN-----GVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVM 287 (384)
Q Consensus 214 ~~v~~~-----G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l 287 (384)
.++.++ |.|||... .+.|..+|+.+.+...+..+. .....++.. +|.|++.........-.+..+
T Consensus 142 ~gvavd~~s~~g~Lyv~D~------~~~I~~id~~~g~v~~~~~~~---~~P~giavd~dG~lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQ------RDAFRHVDFVNQYVDIKTTNI---GQCADVNFTLNGDMVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CEEEECTTTTTCEEEEECB------TSCEEEEETTTTEEEEECCCC---SCEEEEEECTTCCEEEEECCSCTTSEEEEEE
T ss_pred ceEEEccccCCCEEEEEeC------CCCEEEEECCCCEEEEeecCC---CCccEEEECCCCCEEEEcCCCCcccceEEEE
Confidence 466666 89998763 289999999888877653321 122334443 677877765321122333333
Q ss_pred c-CCceeEEEEeCCCCccccceEEEe-CCEEEEEE-eCCeEEEEECCCCeE
Q 038188 288 N-EMNWIQQFAIGPFLGVKSPCGFWK-NNAVLMES-INGKLLLYDLVVQEM 335 (384)
Q Consensus 288 ~-~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~-~~~~l~~yd~~t~~~ 335 (384)
. +..|.....+..+. ...-+.+.. ++.|++.. ..+.+..||++++++
T Consensus 213 ~~~~~~~~~~~~~~~~-~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 213 TRASGFTERLSLCNAR-GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp CGGGTTCCEEEEEECS-SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred ECCCCeeccccccccC-CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 3 33343211221111 122345555 56776664 345688888887766
No 116
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=66.61 E-value=58 Score=27.48 Aligned_cols=140 Identities=9% Similarity=-0.043 Sum_probs=81.8
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCcee-eeecCCCCCCCCc
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEF-QEIQRPCIPYTPF 260 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~ 260 (384)
...+.+++..|++=...-.++.. ++ ...-...++.+|-++. ..+.+..||..+.+- ..++.|. ..
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~-~f----geGi~~~~~~ly~ltw-----~~~~v~v~D~~tl~~~~ti~~~~----~G 107 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPP-YF----GAGIVAWRDRLIQLTW-----RNHEGFVYDLATLTPRARFRYPG----EG 107 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTT-CC----EEEEEEETTEEEEEES-----SSSEEEEEETTTTEEEEEEECSS----CC
T ss_pred CceEEEEECCCCCEEEEEeCCCC-cc----eeEEEEeCCEEEEEEe-----eCCEEEEEECCcCcEEEEEeCCC----Cc
Confidence 56889999988754332212111 11 1122445788998873 478999999987654 4577763 23
Q ss_pred eeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEE-----EeCCEEEEEEe-CCeEEEEECCCCe
Q 038188 261 ESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGF-----WKNNAVLMESI-NGKLLLYDLVVQE 334 (384)
Q Consensus 261 ~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~-----~~~~~il~~~~-~~~l~~yd~~t~~ 334 (384)
..|..-+++|++.... . .|++++-.+=..+.+|.... -..|+.. +.+++|+.... ...+...|++|++
T Consensus 108 wglt~dg~~L~vSdgs---~--~l~~iDp~t~~~~~~I~V~~-~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 108 WALTSDDSHLYMSDGT---A--VIRKLDPDTLQQVGSIKVTA-GGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp CEEEECSSCEEEECSS---S--EEEEECTTTCCEEEEEECEE-TTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCB
T ss_pred eEEeeCCCEEEEECCC---C--eEEEEeCCCCeEEEEEEEcc-CCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCC
Confidence 4555556778776421 3 47788753323334443210 0112111 23788876653 5679999999998
Q ss_pred E-EEEeec
Q 038188 335 M-RDLGRF 341 (384)
Q Consensus 335 ~-~~v~~~ 341 (384)
+ ..+...
T Consensus 182 V~~~idl~ 189 (243)
T 3mbr_X 182 VVAWIDLQ 189 (243)
T ss_dssp EEEEEECG
T ss_pred EEEEEECC
Confidence 6 455544
No 117
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=66.24 E-value=63 Score=27.74 Aligned_cols=136 Identities=9% Similarity=-0.028 Sum_probs=76.4
Q ss_pred EEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCcee-eeecCCCCCCCCceeE
Q 038188 185 VAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEF-QEIQRPCIPYTPFESL 263 (384)
Q Consensus 185 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~l 263 (384)
+.+++..|++=...- .++. ++ ...-...++.+|-++ -..+.+..||.++.+- ..|+.+. ....|
T Consensus 77 v~~iD~~Tgkv~~~~-l~~~-~F----geGit~~g~~Ly~lt-----w~~~~v~V~D~~Tl~~~~ti~~~~----eGwGL 141 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLGN-IF----AEGLASDGERLYQLT-----WTEGLLFTWSGMPPQRERTTRYSG----EGWGL 141 (268)
T ss_dssp EEECCSSCSSCSEEE-ECTT-CC----EEEEEECSSCEEEEE-----SSSCEEEEEETTTTEEEEEEECSS----CCCCE
T ss_pred EEEEECCCCcEEeEE-CCCC-cc----eeEEEEeCCEEEEEE-----ccCCEEEEEECCcCcEEEEEeCCC----ceeEE
Confidence 777777776432211 1111 11 011233456788876 3478999999987655 4577653 23455
Q ss_pred EEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceE-----EEeCCEEEEEEe-CCeEEEEECCCCeE-E
Q 038188 264 APLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCG-----FWKNNAVLMESI-NGKLLLYDLVVQEM-R 336 (384)
Q Consensus 264 ~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~-----~~~~~~il~~~~-~~~l~~yd~~t~~~-~ 336 (384)
..-+++|++.... . .|++++-.+=..+.+|.... -..++. -+.+++|+...+ ...+...|++|+++ +
T Consensus 142 t~Dg~~L~vSdGs---~--~l~~iDp~T~~v~~~I~V~~-~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 142 CYWNGKLVRSDGG---T--MLTFHEPDGFALVGAVQVKL-RGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp EEETTEEEEECSS---S--EEEEECTTTCCEEEEEECEE-TTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEE
T ss_pred ecCCCEEEEECCC---C--EEEEEcCCCCeEEEEEEeCC-CCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEE
Confidence 6667777776421 2 67777752223344443111 111211 122778877654 56799999999986 4
Q ss_pred EEeec
Q 038188 337 DLGRF 341 (384)
Q Consensus 337 ~v~~~ 341 (384)
.+...
T Consensus 216 ~Idl~ 220 (268)
T 3nok_A 216 VIDAS 220 (268)
T ss_dssp EEECH
T ss_pred EEECC
Confidence 55553
No 118
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=65.29 E-value=77 Score=28.42 Aligned_cols=71 Identities=15% Similarity=0.059 Sum_probs=44.4
Q ss_pred CCeEEEEEecCC-----CCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE-EEEE-E-eCCeEEEEECCCCeEEEE
Q 038188 267 NGSIALLHLDES-----NQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA-VLME-S-INGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 267 ~G~L~l~~~~~~-----~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~-~-~~~~l~~yd~~t~~~~~v 338 (384)
+++||+...... ...=+||+++-.+...+.+|. .......+.+..+++ +++. . ..+.+.+||.+|.+....
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 456777643211 023478998877777777774 222344566666766 5544 3 367899999999886543
No 119
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=65.14 E-value=73 Score=28.05 Aligned_cols=100 Identities=13% Similarity=0.006 Sum_probs=52.6
Q ss_pred ccEEEEEEcCCceee-eecCCCCCCCCceeEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEE
Q 038188 234 SKLILLFRISDEEFQ-EIQRPCIPYTPFESLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGF 310 (384)
Q Consensus 234 ~~~il~fD~~~~~~~-~i~~P~~~~~~~~~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 310 (384)
.+.|..+|+.+.+-. .+..+... .....+... ++.+.+....+ ..+.||-+.. ...+.++..+..-..-+.+
T Consensus 191 D~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~l~sg~~d--g~v~~wd~~~--~~~~~~~~~h~~~v~~v~f 265 (344)
T 4gqb_B 191 DNRILLWDTRCPKPASQIGCSAPG-YLPTSLAWHPQQSEVFVFGDEN--GTVSLVDTKS--TSCVLSSAVHSQCVTGLVF 265 (344)
T ss_dssp TSCEEEEETTSSSCEEECC----C-CCEEEEEECSSCTTEEEEEETT--SEEEEEESCC----CCEEEECCSSCEEEEEE
T ss_pred ccccccccccccceeeeeecceee-ccceeeeecCCCCcceEEeccC--CcEEEEECCC--CcEEEEEcCCCCCEEEEEE
Confidence 567888898765443 23332211 111223322 45565555555 7899997764 1222333222212223445
Q ss_pred EeCC-EEEEE-EeCCeEEEEECCCCeEEEE
Q 038188 311 WKNN-AVLME-SINGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 311 ~~~~-~il~~-~~~~~l~~yd~~t~~~~~v 338 (384)
.+++ .++.. ..++.+.+||.+++++..+
T Consensus 266 sp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 266 SPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp CSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred ccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 5554 45444 5677899999999987554
No 120
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=65.12 E-value=73 Score=28.07 Aligned_cols=196 Identities=12% Similarity=0.005 Sum_probs=84.2
Q ss_pred ccceEEEee-CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEE
Q 038188 109 YDGIFCLCD-GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAV 187 (384)
Q Consensus 109 ~~GLl~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (384)
.+|.++... .+.+.|||..+++.......... ++. .....+.+.|. +.+-+..- . .-.+.+
T Consensus 104 ~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~---~h~--~~V~~v~~spd-g~~l~sgs-----~-------dg~v~i 165 (357)
T 4g56_B 104 SEKGILVASDSGAVELWEILEKESLLVNKFAKY---EHD--DIVKTLSVFSD-GTQAVSGG-----K-------DFSVKV 165 (357)
T ss_dssp TTTEEEEEETTSCEEEC--------CCCCEEEC---CCS--SCEEEEEECSS-SSEEEEEE-----T-------TSCEEE
T ss_pred CCCCEEEEECCCEEEEeeccccceeEEEeeccC---CCC--CCEEEEEECCC-CCEEEEEe-----C-------CCeEEE
Confidence 344444433 56899999999876544332211 011 12334455442 23322211 1 356778
Q ss_pred EEcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeee-ecCCCCCCCCceeEE
Q 038188 188 YTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQE-IQRPCIPYTPFESLA 264 (384)
Q Consensus 188 yss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~l~ 264 (384)
|+.+++.-...-.. + ...-.++.+ +|.-+.+.. ...+.|..+|+.+.+... +..... ......+.
T Consensus 166 wd~~~~~~~~~~~~--h-----~~~v~~v~~s~~~~~~~~s~----~~dg~v~~wd~~~~~~~~~~~~~~~-~~~v~~v~ 233 (357)
T 4g56_B 166 WDLSQKAVLKSYNA--H-----SSEVNCVAACPGKDTIFLSC----GEDGRILLWDTRKPKPATRIDFCAS-DTIPTSVT 233 (357)
T ss_dssp EETTTTEEEEEECC--C-----SSCEEEEEECTTCSSCEEEE----ETTSCEEECCTTSSSCBCBCCCTTC-CSCEEEEE
T ss_pred EECCCCcEEEEEcC--C-----CCCEEEEEEccCCCceeeee----ccCCceEEEECCCCceeeeeeeccc-cccccchh
Confidence 88776542211000 0 000012222 232222222 225667778887654322 222211 11112233
Q ss_pred EE--CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCC-EEEEE-EeCCeEEEEECCCCeEEEE
Q 038188 265 PL--NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNN-AVLME-SINGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 265 ~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~-~il~~-~~~~~l~~yd~~t~~~~~v 338 (384)
.. ++.+.+....+ ..+.+|-+... ..+..+.....-..-+.+..++ .++.. ..++.+.+||+++++....
T Consensus 234 ~sp~~~~~la~g~~d--~~i~~wd~~~~--~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 234 WHPEKDDTFACGDET--GNVSLVNIKNP--DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp ECTTSTTEEEEEESS--SCEEEEESSCG--GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred hhhcccceEEEeecc--cceeEEECCCC--cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 22 35555555544 78999987651 1222332222112234444443 45544 5577899999999876543
No 121
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=64.26 E-value=43 Score=28.78 Aligned_cols=109 Identities=6% Similarity=-0.083 Sum_probs=58.7
Q ss_pred Cce-EEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEE
Q 038188 219 NGV-FYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQF 296 (384)
Q Consensus 219 ~G~-lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~ 296 (384)
+|. +||.. ...+.|..+|.. ...+.+..|.. ....+... +|+|++..... ..+.+|-.+ .....+.
T Consensus 55 ~g~~l~~~d-----~~~~~i~~~~~~-g~~~~~~~~~~---~~~gl~~d~dG~l~v~~~~~--~~v~~~~~~-g~~~~~~ 122 (305)
T 3dr2_A 55 AQRTLVWSD-----LVGRRVLGWRED-GTVDVLLDATA---FTNGNAVDAQQRLVHCEHGR--RAITRSDAD-GQAHLLV 122 (305)
T ss_dssp GGTEEEEEE-----TTTTEEEEEETT-SCEEEEEESCS---CEEEEEECTTSCEEEEETTT--TEEEEECTT-SCEEEEE
T ss_pred CCCEEEEEE-----CCCCEEEEEeCC-CCEEEEeCCCC---ccceeeECCCCCEEEEECCC--CEEEEECCC-CCEEEEE
Confidence 454 89986 446789999985 44555544422 12233333 67777655433 455555443 3333221
Q ss_pred EeCCCCcc--ccceEEEeCCEEEEEE------------------eCCeEEEEECCCCeEEEEe
Q 038188 297 AIGPFLGV--KSPCGFWKNNAVLMES------------------INGKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 297 ~i~~~~~~--~~~~~~~~~~~il~~~------------------~~~~l~~yd~~t~~~~~v~ 339 (384)
........ ...+.+..++.+++.. ....++.||+++++++.+.
T Consensus 123 ~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 123 GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 11011001 1235555678887742 1246999999888876653
No 122
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=64.20 E-value=64 Score=31.97 Aligned_cols=57 Identities=18% Similarity=0.172 Sum_probs=34.3
Q ss_pred ceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeee-cCCCCCCCCceeEEEECCeEEEEEec
Q 038188 214 NNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEI-QRPCIPYTPFESLAPLNGSIALLHLD 276 (384)
Q Consensus 214 ~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~~G~L~l~~~~ 276 (384)
.++.+ +|.|||.. .....|.++|+....-+.+ ..+... .....|...++.||++...
T Consensus 543 nGlavd~~~~~LY~aD-----~~~~~I~~~d~dG~~~~~~~~~~~~~-~~P~glavd~~~lywtd~~ 603 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVD-----SKLHSISSIDVNGGNRKTILEDEKRL-AHPFSLAVFEDKVFWTDII 603 (699)
T ss_dssp CCEEECTTTCCEEEEE-----TTTTEEEEECSSSSCCEEECCCSSSC-SSCCCCEEETTEEEEECST
T ss_pred cEEEEeccCCEEEEEe-----cCCCeEEEEccCCCceEEEEecCCcC-CCceEeEEECCEEEEEeCC
Confidence 35666 48899987 4478899999975443333 222111 1223455667788887643
No 123
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=63.62 E-value=10 Score=33.71 Aligned_cols=98 Identities=5% Similarity=0.009 Sum_probs=49.3
Q ss_pred ccEEEEEEcCCceeeeec-CCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcC-CceeEEEEeCCCCccccceEE
Q 038188 234 SKLILLFRISDEEFQEIQ-RPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNE-MNWIQQFAIGPFLGVKSPCGF 310 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i~-~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~ 310 (384)
.+.|..+|+.+..+..+. +... ...-..+... +|++.+....+ ..+.||-++. ..|.....+.....-..-+.+
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~d--~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 108 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSDH-DKIVTCVDWAPKSNRIVTCSQD--RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW 108 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCCC-SSCEEEEEECTTTCCEEEEETT--SSEEEC------CCCCEEECCCCSSCEEEEEC
T ss_pred CCEEEEEEccCCceEEEEEEecC-CceEEEEEEeCCCCEEEEEeCC--CeEEEEEcCCCCceeeeeEecccCCceEEEEE
Confidence 566777888777655432 2221 1222233333 55655555555 7899999987 437766665443322223344
Q ss_pred EeCCE-EEEEEeCCeEEEEECCCCe
Q 038188 311 WKNNA-VLMESINGKLLLYDLVVQE 334 (384)
Q Consensus 311 ~~~~~-il~~~~~~~l~~yd~~t~~ 334 (384)
.+++. ++....++.+.+||+++++
T Consensus 109 ~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 109 SPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp CTTSSCCEEEESSSCEEECCC----
T ss_pred CCCCCEEEEEecCCeEEEEEECCcc
Confidence 44544 4445667778899998875
No 124
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=62.95 E-value=57 Score=28.02 Aligned_cols=106 Identities=5% Similarity=-0.099 Sum_probs=55.4
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceee-eecCCCCCCCCceeEEEE-CCe-EEEEEecCCCCeEEEEEEcCCceeEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQ-EIQRPCIPYTPFESLAPL-NGS-IALLHLDESNQYIEIWVMNEMNWIQQ 295 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~~~~~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l~~~~W~~~ 295 (384)
+|.+|... ...+.|..+|+.+.+.. .++.+... ....+... +|+ +++..... ..+.+|-++...-...
T Consensus 10 ~~~~~v~~-----~~~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~~~v~~~~~--~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 10 GHEYMIVT-----NYPNNLHVVDVASDTVYKSCVMPDKF--GPGTAMMAPDNRTAYVLNNHY--GDIYGIDLDTCKNTFH 80 (349)
T ss_dssp TCEEEEEE-----ETTTEEEEEETTTTEEEEEEECSSCC--SSCEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEE
T ss_pred CCEEEEEe-----CCCCeEEEEECCCCcEEEEEecCCCC--CCceeEECCCCCEEEEEeCCC--CcEEEEeCCCCcEEEE
Confidence 45555544 33678999999887654 45665411 11233333 565 44444333 6777776654322222
Q ss_pred EEeCCC----CccccceEEEeCCE-EEEEEe------------CCeEEEEECCCC
Q 038188 296 FAIGPF----LGVKSPCGFWKNNA-VLMESI------------NGKLLLYDLVVQ 333 (384)
Q Consensus 296 ~~i~~~----~~~~~~~~~~~~~~-il~~~~------------~~~l~~yd~~t~ 333 (384)
..+... ......+.+.++++ +++... .+.+..||++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 222110 00123355555664 444443 368999999884
No 125
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=62.80 E-value=56 Score=28.24 Aligned_cols=71 Identities=11% Similarity=0.138 Sum_probs=42.5
Q ss_pred CeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE-EEEEEeCCeEEEEECCCCeEEEEee
Q 038188 268 GSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA-VLMESINGKLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 268 G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~~~l~~yd~~t~~~~~v~~ 340 (384)
|.+.+....+ ..+.||-++.........+.....-..-+.+..++. ++....++.+.+||+++++...+..
T Consensus 54 g~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 125 (368)
T 3mmy_A 54 GNFLIAGSWA--NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ 125 (368)
T ss_dssp SEEEEEEETT--SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ceEEEEECCC--CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecc
Confidence 4665555555 789999998623333233332222223344445555 4445667889999999998766443
No 126
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=62.57 E-value=73 Score=27.22 Aligned_cols=103 Identities=9% Similarity=-0.010 Sum_probs=55.0
Q ss_pred ccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCe-EEEEEecC---CCCeEEEEEEcCCceeEEEEe-CCCCccccc
Q 038188 234 SKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGS-IALLHLDE---SNQYIEIWVMNEMNWIQQFAI-GPFLGVKSP 307 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~-L~l~~~~~---~~~~l~iW~l~~~~W~~~~~i-~~~~~~~~~ 307 (384)
...|..+|+.+.++..+. .. ...-.++.. +|+ |+++.... ....+.+|-++.........+ ........-
T Consensus 168 ~~~v~~~d~~~g~~~~~~-~~---~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg 243 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA-DL---DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG 243 (305)
T ss_dssp CEEEEEECSSSCCCEEEE-EE---SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS
T ss_pred CCeEEEEcCCCCcEEEEe-cC---CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe
Confidence 468999999887776653 11 111123333 555 66665431 014555555544222111111 111112223
Q ss_pred eEEEeCCEEEEEEeCCeEEEEECCCCeEEEEeec
Q 038188 308 CGFWKNNAVLMESINGKLLLYDLVVQEMRDLGRF 341 (384)
Q Consensus 308 ~~~~~~~~il~~~~~~~l~~yd~~t~~~~~v~~~ 341 (384)
+.+..++.|++.. ...+..||++++.+..+...
T Consensus 244 i~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 244 FCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp EEECTTSCEEECC-SSEEEEECTTSCEEEEEECS
T ss_pred EEECCCCCEEEec-CCcEEEECCCCCEEEEEECC
Confidence 5555677776665 44599999998888877654
No 127
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=62.33 E-value=82 Score=27.67 Aligned_cols=98 Identities=13% Similarity=-0.001 Sum_probs=50.4
Q ss_pred ccEEEEEEcCCceeeeecCCCC-C---CCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceE
Q 038188 234 SKLILLFRISDEEFQEIQRPCI-P---YTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCG 309 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i~~P~~-~---~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~ 309 (384)
.+.|..+|+.+..-........ . ...........+...++...+ ..+.+|-+.. ...+..+........-+.
T Consensus 266 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~v~d~~~--~~~~~~~~~~~~~v~~~~ 341 (408)
T 4a11_B 266 DNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG--STIAVYTVYS--GEQITMLKGHYKTVDCCV 341 (408)
T ss_dssp TSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET--TEEEEEETTT--CCEEEEECCCSSCEEEEE
T ss_pred CCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC--CEEEEEECcC--CcceeeeccCCCeEEEEE
Confidence 5678899998765433211110 0 111111122222223333333 6888888765 334455544332233455
Q ss_pred EEeCCEEEEE-EeCCeEEEEECCCCeE
Q 038188 310 FWKNNAVLME-SINGKLLLYDLVVQEM 335 (384)
Q Consensus 310 ~~~~~~il~~-~~~~~l~~yd~~t~~~ 335 (384)
+.+++.+++. ..++.+.+||+++.+.
T Consensus 342 ~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 342 FQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EETTTTEEEEEETTSCEEEEEECC---
T ss_pred EcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 6666665554 5678899999999864
No 128
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=60.72 E-value=1.1e+02 Score=28.85 Aligned_cols=184 Identities=10% Similarity=0.033 Sum_probs=92.6
Q ss_pred ceEEEee-CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEE
Q 038188 111 GIFCLCD-GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYT 189 (384)
Q Consensus 111 GLl~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (384)
++++... .+...++|..|++.+.+...+. ..+.++|. +.+-+... ..... ...+.+++
T Consensus 123 ~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~------------~~~~~spD-G~~la~~~-~~~~~-------~~~i~~~d 181 (582)
T 3o4h_A 123 AVVFTGATEDRVALYALDGGGLRELARLPG------------FGFVSDIR-GDLIAGLG-FFGGG-------RVSLFTSN 181 (582)
T ss_dssp CEEEEEECSSCEEEEEEETTEEEEEEEESS------------CEEEEEEE-TTEEEEEE-EEETT-------EEEEEEEE
T ss_pred eEEEEecCCCCceEEEccCCcEEEeecCCC------------ceEEECCC-CCEEEEEE-EcCCC-------CeEEEEEc
Confidence 3555443 3566689999998777653221 22334442 23322221 11111 24578888
Q ss_pred cCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeE------
Q 038188 190 SSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESL------ 263 (384)
Q Consensus 190 s~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l------ 263 (384)
..++.++.+....... . .....-||...+.... .....|..+|+++.+...+.-... ....+
T Consensus 182 ~~~g~~~~l~~~~~~~-~-----~~~~SpDG~~l~~~~~---~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~ 249 (582)
T 3o4h_A 182 LSSGGLRVFDSGEGSF-S-----SASISPGMKVTAGLET---AREARLVTVDPRDGSVEDLELPSK---DFSSYRPTAIT 249 (582)
T ss_dssp TTTCCCEEECCSSCEE-E-----EEEECTTSCEEEEEEC---SSCEEEEEECTTTCCEEECCCSCS---HHHHHCCSEEE
T ss_pred CCCCCceEeecCCCcc-c-----cceECCCCCEEEEccC---CCeeEEEEEcCCCCcEEEccCCCc---Chhhhhhcccc
Confidence 8888887664321110 0 0111126764443321 223489999998877762221111 00111
Q ss_pred ---EEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEEEEEE-eC---CeEEEEECCCCeEE
Q 038188 264 ---APLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAVLMES-IN---GKLLLYDLVVQEMR 336 (384)
Q Consensus 264 ---~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~-~~---~~l~~yd~~t~~~~ 336 (384)
..-+|++++....+ ....||.+ . ...+ .+.. ....+.+. ++.+++.. .. ..++.+|.++ +.+
T Consensus 250 ~~~~spdg~~~~~~~~~--g~~~l~~~-g-~~~~----~~~~-~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~ 318 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARRE--GRSAVFID-G-ERVE----APQG-NHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLL 318 (582)
T ss_dssp EEEECTTSCEEEEEEET--TEEEEEET-T-EEEC----CCSS-EEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEE
T ss_pred ceeEcCCCcEEEEEEcC--CcEEEEEE-C-Ceec----cCCC-ceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceE
Confidence 23367776666555 78999998 3 1111 1111 12234555 77776553 22 3588888876 444
Q ss_pred EE
Q 038188 337 DL 338 (384)
Q Consensus 337 ~v 338 (384)
.+
T Consensus 319 ~l 320 (582)
T 3o4h_A 319 EG 320 (582)
T ss_dssp CC
T ss_pred EE
Confidence 43
No 129
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=60.05 E-value=83 Score=27.04 Aligned_cols=29 Identities=14% Similarity=0.227 Sum_probs=19.5
Q ss_pred eEEEeCCEEEE-EEeCCeEEEEECCCCeEE
Q 038188 308 CGFWKNNAVLM-ESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 308 ~~~~~~~~il~-~~~~~~l~~yd~~t~~~~ 336 (384)
+.+.+++..++ ...++.+.+||+++++..
T Consensus 279 ~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 279 IAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred EEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 33444555544 456788999999988653
No 130
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=59.91 E-value=83 Score=26.99 Aligned_cols=204 Identities=13% Similarity=0.074 Sum_probs=100.8
Q ss_pred ccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEE
Q 038188 109 YDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVA 186 (384)
Q Consensus 109 ~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (384)
.+|-+.+.. ...++++|+.+++...+..... ....++.+++.. ..-| .. . ... .....+.
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------~~~~~i~~~~dg-~l~v-~~-~--~~~----~~~~~i~ 115 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK---------ANPAAIKIHKDG-RLFV-CY-L--GDF----KSTGGIF 115 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECSS---------SSEEEEEECTTS-CEEE-EE-C--TTS----SSCCEEE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC---------CCcceEEECCCC-cEEE-Ee-C--CCC----CCCceEE
Confidence 466665543 4679999999998776532111 123455666543 2211 11 0 100 0024677
Q ss_pred EEEcCCCccccc-cCCccccceeecCCcceEEE--CceEEEEEeec-CCCCccEEEEEEcCCceeeeecCCCCCCCCcee
Q 038188 187 VYTSSTDSWRVS-KGNIKWIPYVFESYYNNANL--NGVFYWFVSRA-GDFHSKLILLFRISDEEFQEIQRPCIPYTPFES 262 (384)
Q Consensus 187 vyss~t~~W~~~-~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~-~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~ 262 (384)
+|+..++.-+.. .... +. ..-..+.+ +|.+|...... .......|..+|..+.++..+.-. . .....
T Consensus 116 ~~d~~~~~~~~~~~~~~---~~---~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~-~~~~~ 186 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLS---TA---YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--I-SVANG 186 (333)
T ss_dssp EECTTSCSCEEEECSSS---SC---CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--E-SSEEE
T ss_pred EEeCCCCEEEEEEccCc---cC---CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--C-Ccccc
Confidence 787777654422 1110 00 00112222 57766544210 011246799999887666544210 0 11122
Q ss_pred EEEE-CCe-EEEEEecCCCCeEEEEEEcC--CceeEEE-EeC-CCC--ccccceEEEeCCEEEEEEe-CCeEEEEECCCC
Q 038188 263 LAPL-NGS-IALLHLDESNQYIEIWVMNE--MNWIQQF-AIG-PFL--GVKSPCGFWKNNAVLMESI-NGKLLLYDLVVQ 333 (384)
Q Consensus 263 l~~~-~G~-L~l~~~~~~~~~l~iW~l~~--~~W~~~~-~i~-~~~--~~~~~~~~~~~~~il~~~~-~~~l~~yd~~t~ 333 (384)
+... +|+ |++..... ..+.+|-++. ....... .+. ... .....+.+..++.+++... ++.+..||++++
T Consensus 187 i~~~~dg~~l~v~~~~~--~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 187 IALSTDEKVLWVTETTA--NRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp EEECTTSSEEEEEEGGG--TEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSC
T ss_pred eEECCCCCEEEEEeCCC--CeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCC
Confidence 3333 554 66655443 6777777753 2222111 110 011 1223345556777777654 467999999887
Q ss_pred eEEEEeec
Q 038188 334 EMRDLGRF 341 (384)
Q Consensus 334 ~~~~v~~~ 341 (384)
.++.+...
T Consensus 265 ~~~~~~~~ 272 (333)
T 2dg1_A 265 PIGQILIP 272 (333)
T ss_dssp EEEEEECT
T ss_pred EEEEEEcC
Confidence 77777643
No 131
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=59.86 E-value=93 Score=27.51 Aligned_cols=94 Identities=12% Similarity=0.004 Sum_probs=51.6
Q ss_pred EEEEEEcCCceeeeecCC-CCCCCCceeEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEe
Q 038188 236 LILLFRISDEEFQEIQRP-CIPYTPFESLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWK 312 (384)
Q Consensus 236 ~il~fD~~~~~~~~i~~P-~~~~~~~~~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 312 (384)
.|..+|+.+..-....+. .. ...-..+... +|.+.+....+ ..+.+|-++.. ..+..+........-+.+.+
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~l~s~~~d--g~v~~wd~~~~--~~~~~~~~~~~~v~~~~~s~ 315 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGH-QKGILSLDWCHQDEHLLLSSGRD--NTVLLWNPESA--EQLSQFPARGNWCFKTKFAP 315 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCC-SSCEEEEEECSSCSSCEEEEESS--SEEEEECSSSC--CEEEEEECSSSCCCCEEECT
T ss_pred eEEEEeCCCCCCCcEEeecCc-cCceeEEEeCCCCCCeEEEEeCC--CCEEEeeCCCC--ccceeecCCCCceEEEEECC
Confidence 788888876421111111 11 1122233332 56666665555 78999987752 34444443332233455555
Q ss_pred CC-EEEEE-EeCCeEEEEECCCCe
Q 038188 313 NN-AVLME-SINGKLLLYDLVVQE 334 (384)
Q Consensus 313 ~~-~il~~-~~~~~l~~yd~~t~~ 334 (384)
++ .+++. ..++.+.+||+++.+
T Consensus 316 ~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 316 EAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp TCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCCEEEEEecCCcEEEEEccCCC
Confidence 55 45444 567889999998875
No 132
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=59.79 E-value=89 Score=27.29 Aligned_cols=188 Identities=9% Similarity=-0.051 Sum_probs=91.3
Q ss_pred ceEEEeeCCeEEEEccCccc-ccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEE
Q 038188 111 GIFCLCDGGLITLWNPATKE-CRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYT 189 (384)
Q Consensus 111 GLl~~~~~~~~~V~NP~T~~-~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 189 (384)
.+|++.+...+...++.+.. -..++-.. .....++.+|+..+...++-+ . ...+..++
T Consensus 5 p~ll~~~~~~I~~i~l~~~~~~~~~~~~~---------~~~~~~ld~d~~~~~lyw~D~----~--------~~~I~r~~ 63 (318)
T 3sov_A 5 PLLLYANRRDLRLVDATNGKENATIVVGG---------LEDAAAVDFVFSHGLIYWSDV----S--------EEAIKRTE 63 (318)
T ss_dssp CEEEEECEEEEEEEETTCTTSCCEEEEEE---------EEEEEEEEEEGGGTEEEEEET----T--------TTEEEEEE
T ss_pred cEEEEEccCeEEEEECCCCceEEEEEecC---------CCccEEEEEEeCCCEEEEEEC----C--------CCcEEEEE
Confidence 35666666777777776653 12222111 124566777765443222111 0 34566666
Q ss_pred cCCCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEE-
Q 038188 190 SSTDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAP- 265 (384)
Q Consensus 190 s~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~- 265 (384)
..++.-... . ....... ..++.+ +|.+||.. .....|..+|++...-..+... .. .....+++
T Consensus 64 ~~g~~~~~~--~---~~~~l~~-p~glavd~~~g~ly~~d-----~~~~~I~~~~~dG~~~~~l~~~-~~-~~P~giavd 130 (318)
T 3sov_A 64 FNKTESVQN--V---VVSGLLS-PDGLACDWLGEKLYWTD-----SETNRIEVSNLDGSLRKVLFWQ-EL-DQPRAIALD 130 (318)
T ss_dssp TTSSSCCCE--E---EEECCSC-CCEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSCEEEECS-SC-SSEEEEEEE
T ss_pred ccCCCceEE--E---EcCCCCC-ccEEEEEcCCCeEEEEE-----CCCCEEEEEECCCCcEEEEEeC-CC-CCccEEEEe
Confidence 655421100 0 0000011 123443 68999986 4467899999976543333211 11 12223444
Q ss_pred -ECCeEEEEEecCCCCeEEEEEEcC-CceeEEEEeCCCCccccc--eEEEe-CCEEEEEEe-CCeEEEEECCCCeEEEE
Q 038188 266 -LNGSIALLHLDESNQYIEIWVMNE-MNWIQQFAIGPFLGVKSP--CGFWK-NNAVLMESI-NGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 266 -~~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~--~~~~~-~~~il~~~~-~~~l~~yd~~t~~~~~v 338 (384)
.+|.|++..... .. .|++++- .+-.+.. +. ..+..| +++.. ++.|++... ...+..+|++....+.+
T Consensus 131 p~~g~ly~td~~~-~~--~I~r~~~dG~~~~~~-~~--~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 131 PSSGFMYWTDWGE-VP--KIERAGMDGSSRFII-IN--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp GGGTEEEEEECSS-SC--EEEEEETTSCSCEEE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCCEEEEEecCC-CC--EEEEEEcCCCCeEEE-EE--CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE
Confidence 367888876432 13 4555432 2222211 11 113344 34443 567776643 45688888876554444
No 133
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=59.48 E-value=81 Score=26.70 Aligned_cols=65 Identities=11% Similarity=0.109 Sum_probs=40.8
Q ss_pred CCeEEEEEecCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEe--CCEE-EEEEeCCeEEEEECCCC
Q 038188 267 NGSIALLHLDESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWK--NNAV-LMESINGKLLLYDLVVQ 333 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~--~~~i-l~~~~~~~l~~yd~~t~ 333 (384)
+|++.+....+ ..+.||-++. ..+.....+.....-..-+.+.. ++.+ +....++.+.+||++++
T Consensus 22 ~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 22 YGRHVATCSSD--QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp SSSEEEEEETT--SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTT
T ss_pred CCCEEEEeeCC--CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCC
Confidence 55555545444 7999999986 56777666654332223344444 3444 44566778999999885
No 134
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=59.42 E-value=65 Score=28.03 Aligned_cols=97 Identities=8% Similarity=0.028 Sum_probs=54.7
Q ss_pred CccEEEEEEcCCceeeeec-CCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCC-CCccccceE
Q 038188 233 HSKLILLFRISDEEFQEIQ-RPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGP-FLGVKSPCG 309 (384)
Q Consensus 233 ~~~~il~fD~~~~~~~~i~-~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~-~~~~~~~~~ 309 (384)
..+.|..+|+.+.+...+. .+.. ..-..+... +|.+.+....+ ..+.||-+....-. ...+.. +..-..-+.
T Consensus 147 ~dg~i~~wd~~~~~~~~~~~~~~~--~~i~~~~~~pdg~~lasg~~d--g~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~ 221 (343)
T 3lrv_A 147 NRGTIGFQSYEDDSQYIVHSAKSD--VEYSSGVLHKDSLLLALYSPD--GILDVYNLSSPDQA-SSRFPVDEEAKIKEVK 221 (343)
T ss_dssp TTCCEEEEESSSSCEEEEECCCSS--CCCCEEEECTTSCEEEEECTT--SCEEEEESSCTTSC-CEECCCCTTSCEEEEE
T ss_pred CCCcEEEEECCCCcEEEEEecCCC--CceEEEEECCCCCEEEEEcCC--CEEEEEECCCCCCC-ccEEeccCCCCEEEEE
Confidence 3667888898877664332 2211 112233333 56665555555 89999998762211 022322 222223345
Q ss_pred EEeCCEEEEEEeCCeEEEEECCCCe
Q 038188 310 FWKNNAVLMESINGKLLLYDLVVQE 334 (384)
Q Consensus 310 ~~~~~~il~~~~~~~l~~yd~~t~~ 334 (384)
+.+++..++...++.+.+||+++.+
T Consensus 222 fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 222 FADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp ECTTSSEEEEEESSBEEEEETTSST
T ss_pred EeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 5567776666556689999998864
No 135
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=58.95 E-value=72 Score=30.80 Aligned_cols=112 Identities=15% Similarity=0.109 Sum_probs=60.3
Q ss_pred cceEEECceEEEEEeecCCCCccEEEEEEcC--Cceeeee-cCCCCCC----CCceeEEEECCeEEEEEecCCCCeEEEE
Q 038188 213 YNNANLNGVFYWFVSRAGDFHSKLILLFRIS--DEEFQEI-QRPCIPY----TPFESLAPLNGSIALLHLDESNQYIEIW 285 (384)
Q Consensus 213 ~~~v~~~G~lywl~~~~~~~~~~~il~fD~~--~~~~~~i-~~P~~~~----~~~~~l~~~~G~L~l~~~~~~~~~l~iW 285 (384)
..++..+|.+|.... ...+.++|.. ++.|+.- ..|.... .....++..+|+|++...+. .|.
T Consensus 62 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg-----~l~ 130 (582)
T 1flg_A 62 SQAIVSDGVIYVTAS------YSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDA-----SVV 130 (582)
T ss_dssp CCCEEETTEEEEEET------TTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTT-----EEE
T ss_pred eccEEECCEEEEEcC------CCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCC-----EEE
Confidence 357889999998763 2449999985 4567652 3232110 01123345677777654322 344
Q ss_pred EEcC----CceeEEEEeCCC----CccccceEEEe--CC--EEEEEEe------CCeEEEEECCCCeEEE
Q 038188 286 VMNE----MNWIQQFAIGPF----LGVKSPCGFWK--NN--AVLMESI------NGKLLLYDLVVQEMRD 337 (384)
Q Consensus 286 ~l~~----~~W~~~~~i~~~----~~~~~~~~~~~--~~--~il~~~~------~~~l~~yd~~t~~~~~ 337 (384)
.|+- ..|.... ... .....|+.... ++ .|++... ++.++.||.+|++...
T Consensus 131 AlD~~TG~~~W~~~~--~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 131 ALNKNTGKVVWKKKF--ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp EEESSSCCEEEEEEC--SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE
T ss_pred EEECCCCCEEeeecC--CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe
Confidence 4432 4566432 110 11134443322 12 4555432 5679999999988654
No 136
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=58.80 E-value=96 Score=27.33 Aligned_cols=185 Identities=5% Similarity=-0.065 Sum_probs=88.6
Q ss_pred ccceEEEee-CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEE
Q 038188 109 YDGIFCLCD-GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAV 187 (384)
Q Consensus 109 ~~GLl~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 187 (384)
.+|.++... .+.+.++|..+++....-... . .....+.+.+.. .+-++.- . .-.+.+
T Consensus 216 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~-------~--~~i~~~~~~~~~-~~l~~~~-----~-------d~~i~i 273 (425)
T 1r5m_A 216 DDDKFVIPGPKGAIFVYQITEKTPTGKLIGH-------H--GPISVLEFNDTN-KLLLSAS-----D-------DGTLRI 273 (425)
T ss_dssp ETTEEEEECGGGCEEEEETTCSSCSEEECCC-------S--SCEEEEEEETTT-TEEEEEE-----T-------TSCEEE
T ss_pred CCCEEEEEcCCCeEEEEEcCCCceeeeeccC-------C--CceEEEEECCCC-CEEEEEc-----C-------CCEEEE
Confidence 455554443 568899999887554321111 0 123345555533 2222211 1 356778
Q ss_pred EEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeee-ecCCCCCCCCceeEEEE
Q 038188 188 YTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQE-IQRPCIPYTPFESLAPL 266 (384)
Q Consensus 188 yss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~l~~~ 266 (384)
|+.+++.-...-... ..+.. .-...-+| +.++. ...+.|..+|+.+.+... +.... ..-..+...
T Consensus 274 ~d~~~~~~~~~~~~~-~~~i~----~~~~~~~~--~l~~~----~~d~~i~i~d~~~~~~~~~~~~~~---~~i~~~~~s 339 (425)
T 1r5m_A 274 WHGGNGNSQNCFYGH-SQSIV----SASWVGDD--KVISC----SMDGSVRLWSLKQNTLLALSIVDG---VPIFAGRIS 339 (425)
T ss_dssp ECSSSBSCSEEECCC-SSCEE----EEEEETTT--EEEEE----ETTSEEEEEETTTTEEEEEEECTT---CCEEEEEEC
T ss_pred EECCCCccceEecCC-CccEE----EEEECCCC--EEEEE----eCCCcEEEEECCCCcEeEecccCC---ccEEEEEEc
Confidence 887765322211000 00110 00111255 33332 336788999997765433 23221 112223322
Q ss_pred -CCeEEEEEecCCCCeEEEEEEcC-C----c-------------eeEEEEeCCCCc--cccceEEEeCCEE-EEEEeCCe
Q 038188 267 -NGSIALLHLDESNQYIEIWVMNE-M----N-------------WIQQFAIGPFLG--VKSPCGFWKNNAV-LMESINGK 324 (384)
Q Consensus 267 -~G~L~l~~~~~~~~~l~iW~l~~-~----~-------------W~~~~~i~~~~~--~~~~~~~~~~~~i-l~~~~~~~ 324 (384)
+|++.++...+ ..+.||-++. . . +..+..+..... ...-+.+.+++.. +....++.
T Consensus 340 ~~~~~l~~~~~d--g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 417 (425)
T 1r5m_A 340 QDGQKYAVAFMD--GQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQE 417 (425)
T ss_dssp TTSSEEEEEETT--SCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSC
T ss_pred CCCCEEEEEECC--CeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCce
Confidence 56665555554 7899999875 1 0 113344433321 2223444455544 45566777
Q ss_pred EEEEECC
Q 038188 325 LLLYDLV 331 (384)
Q Consensus 325 l~~yd~~ 331 (384)
+.+||++
T Consensus 418 i~iw~~~ 424 (425)
T 1r5m_A 418 GSVVAIP 424 (425)
T ss_dssp CEEEECC
T ss_pred EEEEeec
Confidence 8888876
No 137
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=58.48 E-value=1.5e+02 Score=29.33 Aligned_cols=99 Identities=9% Similarity=0.117 Sum_probs=53.3
Q ss_pred CccEEEEEEcCCceeee-ecCCCCCCCCceeEEEE---CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccce
Q 038188 233 HSKLILLFRISDEEFQE-IQRPCIPYTPFESLAPL---NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPC 308 (384)
Q Consensus 233 ~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~l~~~---~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~ 308 (384)
..+.|..+|+.+..... +..+.. .....+... +|.+.++...+ ..+.+|-+... ..+..+.........+
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~d--g~i~~~d~~~~--~~~~~~~~~~~~v~~~ 234 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQE--RGVNYVDYYPLPDKPYMITASDD--LTIKIWDYQTK--SCVATLEGHMSNVSFA 234 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCT--TCCCEEEECCSTTCCEEEEECTT--SEEEEEETTTT--EEEEEEECCSSCEEEE
T ss_pred CCCeEEEEECCCCcceeEEecCCC--CCEEEEEEEECCCCCEEEEEeCC--CEEEEEECCCC--cEEEEEcCCCCCEEEE
Confidence 36788889986554322 222211 111122222 56665555554 78999987652 2333333322222334
Q ss_pred EEEeCCEEEE-EEeCCeEEEEECCCCeEEE
Q 038188 309 GFWKNNAVLM-ESINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 309 ~~~~~~~il~-~~~~~~l~~yd~~t~~~~~ 337 (384)
.+.+++.+++ ...++.+.+||+.+++...
T Consensus 235 ~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 235 VFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 4555655444 4557889999999876433
No 138
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=57.72 E-value=1e+02 Score=27.39 Aligned_cols=99 Identities=10% Similarity=0.086 Sum_probs=56.6
Q ss_pred CccEEEEEEcCCceee-eecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEE
Q 038188 233 HSKLILLFRISDEEFQ-EIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGF 310 (384)
Q Consensus 233 ~~~~il~fD~~~~~~~-~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 310 (384)
..+.|..+|+.+.+.. .+..+ ..-..+... +|+..++........+.||-+......+...+.....-..-+.+
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~ 357 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVDAG----SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSAL 357 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEECS----SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCC----CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEE
Confidence 3677888888765443 23322 112233332 56665554433348999999987556666555433322233455
Q ss_pred EeCCEEEE-EEeCCeEEEEECCCCeE
Q 038188 311 WKNNAVLM-ESINGKLLLYDLVVQEM 335 (384)
Q Consensus 311 ~~~~~il~-~~~~~~l~~yd~~t~~~ 335 (384)
..++..++ ...++.+.+||+.+++.
T Consensus 358 s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 358 SPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp CTTSSEEEEECTTSEEEEEECCC---
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 55666544 45678899999998764
No 139
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=57.56 E-value=1e+02 Score=27.27 Aligned_cols=72 Identities=18% Similarity=0.191 Sum_probs=42.9
Q ss_pred CCeEEEEEe-cCC-----CCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEEEEEEeCCeEEEEECCCCeEEEEee
Q 038188 267 NGSIALLHL-DES-----NQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAVLMESINGKLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 267 ~G~L~l~~~-~~~-----~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~~~~v~~ 340 (384)
++++++... ... ...-.||+.+-.+...+.++.... ..-+.+..+++.++....+.+.+||.+|++++.+..
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEE
Confidence 356777654 110 123456666654556677774333 455666677665555444789999999995555544
No 140
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=57.37 E-value=91 Score=26.63 Aligned_cols=139 Identities=5% Similarity=-0.055 Sum_probs=79.4
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCcee-eeecCCCCCCCCc
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEF-QEIQRPCIPYTPF 260 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~ 260 (384)
...+.+++..|++=...-..++. ++ ...-...++.+|-++ -..+.+..||.++.+- ..++.|. ..
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~l~~~-~F----geGit~~g~~ly~lt-----w~~~~v~v~D~~t~~~~~ti~~~~----eG 129 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIELGKR-YF----GEGISDWKDKIVGLT-----WKNGLGFVWNIRNLRQVRSFNYDG----EG 129 (262)
T ss_dssp EEEEEEECTTTCCEEEEEECCTT-CC----EEEEEEETTEEEEEE-----SSSSEEEEEETTTCCEEEEEECSS----CC
T ss_pred CceEEEEECCCCcEEEEEecCCc-cc----eeEEEEeCCEEEEEE-----eeCCEEEEEECccCcEEEEEECCC----Cc
Confidence 46788899888753322111111 11 011234567888887 3478999999987554 4577763 22
Q ss_pred eeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccc------eEEEeCCEEEEEEe-CCeEEEEECCCC
Q 038188 261 ESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSP------CGFWKNNAVLMESI-NGKLLLYDLVVQ 333 (384)
Q Consensus 261 ~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~------~~~~~~~~il~~~~-~~~l~~yd~~t~ 333 (384)
..+..-++.|++.... . .||+++-.+=..+.+|.... -.+| +.. .+++|+.... ...+...|++|+
T Consensus 130 ~glt~dg~~L~~SdGs---~--~i~~iDp~T~~v~~~I~V~~-~g~~~~~lNELe~-~~G~lyan~w~~~~I~vIDp~tG 202 (262)
T 3nol_A 130 WGLTHNDQYLIMSDGT---P--VLRFLDPESLTPVRTITVTA-HGEELPELNELEW-VDGEIFANVWQTNKIVRIDPETG 202 (262)
T ss_dssp CCEEECSSCEEECCSS---S--EEEEECTTTCSEEEEEECEE-TTEECCCEEEEEE-ETTEEEEEETTSSEEEEECTTTC
T ss_pred eEEecCCCEEEEECCC---C--eEEEEcCCCCeEEEEEEecc-CCccccccceeEE-ECCEEEEEEccCCeEEEEECCCC
Confidence 3455556667765321 2 58888763333344443210 1122 222 3778877654 567999999999
Q ss_pred eEE-EEeec
Q 038188 334 EMR-DLGRF 341 (384)
Q Consensus 334 ~~~-~v~~~ 341 (384)
++. .+...
T Consensus 203 ~V~~~Id~~ 211 (262)
T 3nol_A 203 KVTGIIDLN 211 (262)
T ss_dssp BEEEEEECT
T ss_pred cEEEEEECC
Confidence 864 45553
No 141
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=55.97 E-value=97 Score=26.54 Aligned_cols=53 Identities=11% Similarity=0.255 Sum_probs=33.0
Q ss_pred CeEEEEEEcC-CceeEEEEeCCCCccccceEEEeCC----E-EEEEEeCCeEEEEECCC
Q 038188 280 QYIEIWVMNE-MNWIQQFAIGPFLGVKSPCGFWKNN----A-VLMESINGKLLLYDLVV 332 (384)
Q Consensus 280 ~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~----~-il~~~~~~~l~~yd~~t 332 (384)
..+.||-++. ..|..+..+..+.....-+.+.+++ . ++-...++.+.+||+++
T Consensus 189 ~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 189 NLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp SBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 7899999975 6687766554333222233444432 3 44446678899999876
No 142
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=54.91 E-value=1.2e+02 Score=27.41 Aligned_cols=197 Identities=10% Similarity=-0.036 Sum_probs=97.2
Q ss_pred cccceEEEeeC--CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEE
Q 038188 108 PYDGIFCLCDG--GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHV 185 (384)
Q Consensus 108 s~~GLl~~~~~--~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (384)
..+|-|.+.+. ..+.++|+.+++...+..... ... +.+++..+ .++... ... ...+
T Consensus 139 d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~----------~~~-ia~~~~g~--~l~~~d---~~~------~~~I 196 (409)
T 3hrp_A 139 VGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK----------GGK-PAVTKDKQ--RVYSIG---WEG------THTV 196 (409)
T ss_dssp CSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC----------BCB-CEECTTSS--EEEEEB---SST------TCEE
T ss_pred eCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC----------CCc-eeEecCCC--cEEEEe---cCC------CceE
Confidence 35676666653 588999999888776643211 111 44454332 111110 000 1256
Q ss_pred EEEEcCCCc-cccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeec---CCCCCCC
Q 038188 186 AVYTSSTDS-WRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQ---RPCIPYT 258 (384)
Q Consensus 186 ~vyss~t~~-W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~---~P~~~~~ 258 (384)
.+++..++. .+........ . ... ..++.+ +|.+|+ +. ..+.|..+|+.+.....+. .... ..
T Consensus 197 ~~~d~~~~~~~~~~g~~~~~--~-~~~-p~~iav~p~~g~lyv-~d-----~~~~I~~~d~~~~~~~~~~~~~~~g~-~~ 265 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQLGST--F-SGK-IGAVALDETEEWLYF-VD-----SNKNFGRFNVKTQEVTLIKQLELSGS-LG 265 (409)
T ss_dssp EEEEGGGTTCEEEEEECCTT--S-CSC-CCBCEECTTSSEEEE-EC-----TTCEEEEEETTTCCEEEEEECCCCSC-CC
T ss_pred EEEEcCCCceeEEeeeccch--h-cCC-cEEEEEeCCCCeEEE-EE-----CCCcEEEEECCCCCEEEEecccccCC-CC
Confidence 666665432 1122100000 0 001 122333 689999 42 2668999999877655541 1111 11
Q ss_pred Cc-e-eEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCC----------Cccccce--EEEeCCEEEEEE--
Q 038188 259 PF-E-SLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPF----------LGVKSPC--GFWKNNAVLMES-- 320 (384)
Q Consensus 259 ~~-~-~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~----------~~~~~~~--~~~~~~~il~~~-- 320 (384)
.. . .++.. +|.|++..... .++..|-.+ ..-..+..-... ..+..|. ++.+++.+++..
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~--~~I~~~~~~-g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~ 342 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNL--SSVYKITPD-GECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF 342 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTT--TEEEEECTT-CCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT
T ss_pred CCccccEEEeCCCCEEEEEeCCC--CEEEEEecC-CCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC
Confidence 22 2 55554 57888876543 444444333 221111110000 0123344 445567777664
Q ss_pred eCCeEEEEECCCCeEEEEee
Q 038188 321 INGKLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 321 ~~~~l~~yd~~t~~~~~v~~ 340 (384)
.+..+..+|+.++++..+.-
T Consensus 343 ~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 343 KGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp TTCEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEeC
Confidence 45679999988888776654
No 143
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=54.90 E-value=97 Score=26.21 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=52.9
Q ss_pred ccEEEEEEcCCceeeee-cCCCCCCCCceeEEEE---CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceE
Q 038188 234 SKLILLFRISDEEFQEI-QRPCIPYTPFESLAPL---NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCG 309 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~~---~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~ 309 (384)
.+.|..+|+.++....+ .+.... ..-..+... +|.+.+....+ ..+.||-++...|..+..+........-+.
T Consensus 30 D~~v~iw~~~~~~~~~~~~l~gH~-~~V~~v~~s~~~~g~~l~s~s~D--~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~ 106 (297)
T 2pm7_B 30 DKTIKIFEVEGETHKLIDTLTGHE-GPVWRVDWAHPKFGTILASCSYD--GKVMIWKEENGRWSQIAVHAVHSASVNSVQ 106 (297)
T ss_dssp TSCEEEEEBCSSCBCCCEEECCCS-SCEEEEEECCGGGCSEEEEEETT--TEEEEEEBSSSCBCCCEEECCCSSCEEEEE
T ss_pred CCEEEEEecCCCCcEEEEEEcccc-CCeEEEEecCCCcCCEEEEEcCC--CEEEEEEcCCCceEEEEEeecCCCceeEEE
Confidence 55677777765433221 111111 111223322 26665555555 899999998766766665543322222344
Q ss_pred EEeC--C-EEEEEEeCCeEEEEECCCC
Q 038188 310 FWKN--N-AVLMESINGKLLLYDLVVQ 333 (384)
Q Consensus 310 ~~~~--~-~il~~~~~~~l~~yd~~t~ 333 (384)
+.++ + .++....++.+.+||++++
T Consensus 107 ~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 107 WAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp ECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred eCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 4433 4 4444566788999998875
No 144
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=52.22 E-value=1.2e+02 Score=26.32 Aligned_cols=198 Identities=7% Similarity=-0.056 Sum_probs=94.6
Q ss_pred ccccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccE
Q 038188 107 GPYDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAH 184 (384)
Q Consensus 107 ~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (384)
++.+|.+.+.+ .+.++++||.+++...+..+. ...++.+++. +.+ ++.. ...
T Consensus 57 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----------~v~~i~~~~d-g~l-~v~~-------------~~g 110 (326)
T 2ghs_A 57 DPASGTAWWFNILERELHELHLASGRKTVHALPF-----------MGSALAKISD-SKQ-LIAS-------------DDG 110 (326)
T ss_dssp ETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSS-----------CEEEEEEEET-TEE-EEEE-------------TTE
T ss_pred eCCCCEEEEEECCCCEEEEEECCCCcEEEEECCC-----------cceEEEEeCC-CeE-EEEE-------------CCC
Confidence 34456665554 468999999998766543211 1233445543 222 2211 124
Q ss_pred EEEEEcCCCccccccCCccccceeecCCcceEE--ECceEEEEEeec-CCCCccEEEEEEcCCceeeeecCCCCCCCCce
Q 038188 185 VAVYTSSTDSWRVSKGNIKWIPYVFESYYNNAN--LNGVFYWFVSRA-GDFHSKLILLFRISDEEFQEIQRPCIPYTPFE 261 (384)
Q Consensus 185 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~-~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~ 261 (384)
+.+|+..++..+.+.......+... -..+. -+|.+|.-.... .......|..+| +.+...+.-. . ....
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~~~~---~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~--~-~~~~ 182 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLPGNR---SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD--I-SIPN 182 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCTTEE---EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE--E-SSEE
T ss_pred EEEEECCCCcEEEEeeCCCCCCCCC---CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC--C-cccC
Confidence 6778887777665432211111000 01222 267765433211 011246888998 4555443110 0 1111
Q ss_pred eEEEE-CCe-EEEEEecCCCCeEEEEEEc--CC-cee--EE-EEeCCCCccccceEEEeCCEEEEEEe-CCeEEEEECCC
Q 038188 262 SLAPL-NGS-IALLHLDESNQYIEIWVMN--EM-NWI--QQ-FAIGPFLGVKSPCGFWKNNAVLMESI-NGKLLLYDLVV 332 (384)
Q Consensus 262 ~l~~~-~G~-L~l~~~~~~~~~l~iW~l~--~~-~W~--~~-~~i~~~~~~~~~~~~~~~~~il~~~~-~~~l~~yd~~t 332 (384)
.+... +|+ |++..... ..+.+|-++ .. ... +. ..+........-+.+..++.+++... .+.+..||+++
T Consensus 183 ~i~~s~dg~~lyv~~~~~--~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g 260 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDTKV--NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG 260 (326)
T ss_dssp EEEECTTSCEEEEEETTT--CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTC
T ss_pred CeEEcCCCCEEEEEECCC--CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCC
Confidence 33333 554 66654332 556666554 22 221 11 12211111122234445677766654 46799999977
Q ss_pred CeEEEEee
Q 038188 333 QEMRDLGR 340 (384)
Q Consensus 333 ~~~~~v~~ 340 (384)
+.++.+..
T Consensus 261 ~~~~~i~~ 268 (326)
T 2ghs_A 261 NHIARYEV 268 (326)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 77777654
No 145
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=51.37 E-value=1.2e+02 Score=26.24 Aligned_cols=95 Identities=13% Similarity=0.121 Sum_probs=53.6
Q ss_pred ccEEEEEEcCCceeee-ecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEE
Q 038188 234 SKLILLFRISDEEFQE-IQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFW 311 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~-i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 311 (384)
.+.|..+|+.+..... +... ...-..+... +|++.+....+ ..+.+|-+... ..+..+........-+.+.
T Consensus 163 d~~i~~wd~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~sg~~d--~~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~ 235 (340)
T 1got_B 163 DTTCALWDIETGQQTTTFTGH---TGDVMSLSLAPDTRLFVSGACD--ASAKLWDVREG--MCRQTFTGHESDINAICFF 235 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCC---SSCEEEEEECTTSSEEEEEETT--SCEEEEETTTC--SEEEEECCCSSCEEEEEEC
T ss_pred CCcEEEEECCCCcEEEEEcCC---CCceEEEEECCCCCEEEEEeCC--CcEEEEECCCC--eeEEEEcCCcCCEEEEEEc
Confidence 5678888987765432 2211 1112233332 56666655555 78999987652 2333443333222334555
Q ss_pred eCCEEEEE-EeCCeEEEEECCCCeE
Q 038188 312 KNNAVLME-SINGKLLLYDLVVQEM 335 (384)
Q Consensus 312 ~~~~il~~-~~~~~l~~yd~~t~~~ 335 (384)
+++..++. ..++.+.+||+++++.
T Consensus 236 p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 236 PNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcE
Confidence 56555444 5577899999998764
No 146
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=51.01 E-value=1.2e+02 Score=26.19 Aligned_cols=105 Identities=10% Similarity=0.110 Sum_probs=57.8
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEE-ECCeEEEEEecCCCCeEEEEEEcCCceeEEEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAP-LNGSIALLHLDESNQYIEIWVMNEMNWIQQFA 297 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~-~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~ 297 (384)
+|.+||.. .....|..+|+.+.+...+..|.. -..++. -+|++.+.. . ..+.+|-.+......+..
T Consensus 60 ~~~l~~~d-----~~~~~i~~~d~~~~~~~~~~~~~~----v~~i~~~~dg~l~v~~--~--~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 60 SGTAWWFN-----ILERELHELHLASGRKTVHALPFM----GSALAKISDSKQLIAS--D--DGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp TTEEEEEE-----GGGTEEEEEETTTTEEEEEECSSC----EEEEEEEETTEEEEEE--T--TEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEE-----CCCCEEEEEECCCCcEEEEECCCc----ceEEEEeCCCeEEEEE--C--CCEEEEECCCCcEEEEee
Confidence 37899987 346789999999888777766532 223333 478877654 2 333333333344443322
Q ss_pred eCCCCcc--ccceEEEeCCEEEEEEe-------CCeEEEEECCCCeEEEE
Q 038188 298 IGPFLGV--KSPCGFWKNNAVLMESI-------NGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 298 i~~~~~~--~~~~~~~~~~~il~~~~-------~~~l~~yd~~t~~~~~v 338 (384)
....... ...+.+..++.+++... .+.++.|| +++++.+
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 2111101 12234445677766543 24688888 5666554
No 147
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=49.84 E-value=1.3e+02 Score=26.04 Aligned_cols=113 Identities=10% Similarity=0.132 Sum_probs=59.2
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCC-------CCCceeEEEE-C-CeEEEEEecCCCCeEEEEEEcC
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIP-------YTPFESLAPL-N-GSIALLHLDESNQYIEIWVMNE 289 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~-------~~~~~~l~~~-~-G~L~l~~~~~~~~~l~iW~l~~ 289 (384)
+|.+|+... .....|..||........+..+... ......++.. + |.|+++.... .++.+|-.+.
T Consensus 154 ~g~lyv~d~----~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~--~~I~~~~~~~ 227 (329)
T 3fvz_A 154 TGAVFVSDG----YCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN--GRIQCFKTDT 227 (329)
T ss_dssp TCCEEEEEC----SSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT--TEEEEEETTT
T ss_pred CCeEEEEeC----CCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC--CEEEEEECCC
Confidence 578887762 1378899999766655554322110 0112234444 4 7888877655 7888888774
Q ss_pred CceeEEEEeCCCCccccceEEEeCCEEEEEE--------eCCeEEEEECCCCeEEEE
Q 038188 290 MNWIQQFAIGPFLGVKSPCGFWKNNAVLMES--------INGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 290 ~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~--------~~~~l~~yd~~t~~~~~v 338 (384)
..............-...+.+.+ +.++... ....+..||..++++...
T Consensus 228 G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 228 KEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp CCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred CcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 33333222111110111122222 3333322 233688999888776543
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=49.44 E-value=1.3e+02 Score=26.09 Aligned_cols=95 Identities=8% Similarity=0.106 Sum_probs=51.6
Q ss_pred ccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCe-EEEEEecC-CCCeEEEEEEcC--CceeEEEEeCCCCccccce
Q 038188 234 SKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGS-IALLHLDE-SNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPC 308 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~-L~l~~~~~-~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~ 308 (384)
.-.++.+|.++.+++.+... .. .....++.. +|+ |+++.... ....+.+|.++. ....++..+.... ..|.
T Consensus 28 ~i~~~~~d~~~g~~~~~~~~-~~-~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~--~~p~ 103 (361)
T 3scy_A 28 GIYTFRFNEETGESLPLSDA-EV-ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG--ADPC 103 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEE-EC-SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS--SCEE
T ss_pred CEEEEEEeCCCCCEEEeecc-cC-CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC--CCcE
Confidence 44566677777777665332 11 122234433 565 55544321 347999999986 5566665553222 2333
Q ss_pred EEE-eCCEEEEEE-eCCeEEEEECCC
Q 038188 309 GFW-KNNAVLMES-INGKLLLYDLVV 332 (384)
Q Consensus 309 ~~~-~~~~il~~~-~~~~l~~yd~~t 332 (384)
.+. .++.+++.. .++.+.+||+.+
T Consensus 104 ~~~~dg~~l~~~~~~~~~v~~~~~~~ 129 (361)
T 3scy_A 104 YLTTNGKNIVTANYSGGSITVFPIGQ 129 (361)
T ss_dssp EEEECSSEEEEEETTTTEEEEEEBCT
T ss_pred EEEECCCEEEEEECCCCEEEEEEeCC
Confidence 332 344455444 356788999864
No 149
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=48.59 E-value=1.8e+02 Score=27.50 Aligned_cols=112 Identities=9% Similarity=0.065 Sum_probs=64.7
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeee-ecCCCCCC-CCceeEEEEC-CeEEEEEecCCCCeEEEEEEcC-----C
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQE-IQRPCIPY-TPFESLAPLN-GSIALLHLDESNQYIEIWVMNE-----M 290 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~-~~~~~l~~~~-G~L~l~~~~~~~~~l~iW~l~~-----~ 290 (384)
+|...+.+. ...+.|..+|+.+.+... ++...... +....+..-+ |.+++... .....+.||-.+. .
T Consensus 334 dg~~l~va~----~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~-~~d~~V~v~d~~~~~~~~~ 408 (543)
T 1nir_A 334 SHRYFMTAA----NNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH-LGDGSISLIGTDPKNHPQY 408 (543)
T ss_dssp TSCEEEEEE----GGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEB-SSSSEEEEEECCTTTCTTT
T ss_pred CCCEEEEEe----cCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEecc-CCCceEEEEEeCCCCCchh
Confidence 566444443 336788889998876643 34321111 1122222223 55554433 2237899999875 2
Q ss_pred ceeEEEEeCCCCccccceEEEeCCEEEEEEe--------CCeEEEEECCCCeE
Q 038188 291 NWIQQFAIGPFLGVKSPCGFWKNNAVLMESI--------NGKLLLYDLVVQEM 335 (384)
Q Consensus 291 ~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~--------~~~l~~yd~~t~~~ 335 (384)
.|..+.++.....-...+.++++++.++... +..+.+||.+|.+.
T Consensus 409 ~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 409 AWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp BTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred cCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 3999888864321223455666776666543 44799999998764
No 150
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=48.41 E-value=1.4e+02 Score=26.11 Aligned_cols=96 Identities=10% Similarity=0.011 Sum_probs=51.6
Q ss_pred cEEEEEEcCCcee-eeecCCCCC----------CCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeC---
Q 038188 235 KLILLFRISDEEF-QEIQRPCIP----------YTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIG--- 299 (384)
Q Consensus 235 ~~il~fD~~~~~~-~~i~~P~~~----------~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~--- 299 (384)
+.|..+|+.+.+. ..+..|... ...-..+... +|++.+....+ ..+.||-+.. ...+..+.
T Consensus 258 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~--~~~~~~~~~~~ 333 (397)
T 1sq9_A 258 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD--GKLRFWDVKT--KERITTLNMHC 333 (397)
T ss_dssp EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT--SEEEEEETTT--TEEEEEEECCG
T ss_pred ceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC--CeEEEEEcCC--CceeEEEeccc
Confidence 7889999876543 334432110 1112233333 56665555544 7999998875 33444443
Q ss_pred ---CC---------------CccccceEEEeCC----------EE-EEEEeCCeEEEEECCCCe
Q 038188 300 ---PF---------------LGVKSPCGFWKNN----------AV-LMESINGKLLLYDLVVQE 334 (384)
Q Consensus 300 ---~~---------------~~~~~~~~~~~~~----------~i-l~~~~~~~l~~yd~~t~~ 334 (384)
.. ..-..-+.+.+++ .+ +....++.+.+||+++++
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 334 DDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp GGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred CcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 22 1112234455564 34 445668889999998764
No 151
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=47.61 E-value=1.6e+02 Score=26.54 Aligned_cols=184 Identities=8% Similarity=0.007 Sum_probs=89.5
Q ss_pred CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCCccccc
Q 038188 119 GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTDSWRVS 198 (384)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~~W~~~ 198 (384)
..++++|..+++.+.|.... .......+.|.. .+ ++.... .. ....+.+++..++.-+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~----------~~v~~~~~Spdg-~~-la~~s~--~~------~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP----------QPLMSPAWSPDG-SK-LAYVTF--ES------GRSALVIQTLANGAVRQV 218 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES----------SCEEEEEECTTS-SE-EEEEEC--TT------SSCEEEEEETTTCCEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCC----------CcceeeEEcCCC-CE-EEEEEe--cC------CCcEEEEEECCCCcEEEe
Confidence 57899998876655553221 122334444432 22 222211 10 136788999988876544
Q ss_pred cCCccccceeecCCcceEEE--Cce-EEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCe-EEEE
Q 038188 199 KGNIKWIPYVFESYYNNANL--NGV-FYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGS-IALL 273 (384)
Q Consensus 199 ~~~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~-L~l~ 273 (384)
.... . .. .++.+ +|. +.+.... .....|..+|+.+.+...+.... .....+... +|+ |+..
T Consensus 219 ~~~~-~-~~------~~~~~spdg~~la~~~~~---~g~~~i~~~d~~~~~~~~l~~~~---~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 219 ASFP-R-HN------GAPAFSPDGSKLAFALSK---TGSLNLYVMDLASGQIRQVTDGR---SNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp ECCS-S-CE------EEEEECTTSSEEEEEECT---TSSCEEEEEETTTCCEEECCCCS---SCEEEEEECTTSSEEEEE
T ss_pred ecCC-C-cc------cCEEEcCCCCEEEEEEec---CCCceEEEEECCCCCEEeCcCCC---CcccceEECCCCCEEEEE
Confidence 3221 0 00 11222 565 5544431 22457899999887765442211 112233333 666 4433
Q ss_pred EecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE-EEEEEeC---CeEEEEECCCCeEEEEe
Q 038188 274 HLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA-VLMESIN---GKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 274 ~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~---~~l~~yd~~t~~~~~v~ 339 (384)
.... ....||+++-..-. ...+.........+.+..+++ |++.... ..+..+|+++++.+.+.
T Consensus 285 s~~~--g~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 285 SDQA--GRPQVYKVNINGGA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp ECTT--SSCEEEEEETTSSC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC
T ss_pred ECCC--CCcEEEEEECCCCC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec
Confidence 3333 44566666541111 112221111112234445555 4444432 47999999999886654
No 152
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=47.48 E-value=1.8e+02 Score=27.20 Aligned_cols=95 Identities=8% Similarity=0.032 Sum_probs=53.5
Q ss_pred ccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCC-CCccccceEEE
Q 038188 234 SKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGP-FLGVKSPCGFW 311 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~-~~~~~~~~~~~ 311 (384)
.+.|..+|+.+.......+... ...-..+... +|++.++...+ ..+.||-++. ...+..+.. +..-..-+.+.
T Consensus 466 d~~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~~d--g~i~iw~~~~--~~~~~~~~~~h~~~v~~~~~s 540 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSFDLKTPL-RAKPSYISISPSETYIAAGDVM--GKILLYDLQS--REVKTSRWAFRTSKINAISWK 540 (615)
T ss_dssp TSCEEEEETTEEEEEEECSSCC-SSCEEEEEECTTSSEEEEEETT--SCEEEEETTT--TEEEECCSCCCSSCEEEEEEC
T ss_pred CCeEEEEECCCccccccccCCc-cCceEEEEECCCCCEEEEcCCC--CeEEEeeCCC--CcceeEeecCCCCceeEEEEc
Confidence 5678888888776542222211 1222233333 66766655555 7899998875 223333322 22222334455
Q ss_pred e----------CCEEEEE-EeCCeEEEEECCCC
Q 038188 312 K----------NNAVLME-SINGKLLLYDLVVQ 333 (384)
Q Consensus 312 ~----------~~~il~~-~~~~~l~~yd~~t~ 333 (384)
+ ++.+++. ..++.+.+||+++.
T Consensus 541 p~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 541 PAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp CCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred CccccccccccCCCEEEEEcCCCcEEEEECCCC
Confidence 5 6666555 55778999999996
No 153
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=47.42 E-value=1.4e+02 Score=25.79 Aligned_cols=196 Identities=10% Similarity=0.088 Sum_probs=90.0
Q ss_pred eeccccceEEEee-CCeEEEEccCcccccc-cCCCCCCCCcccccceeeeEEeeeCC-CCCEEEEEEEEEeccccccccc
Q 038188 105 LLGPYDGIFCLCD-GGLITLWNPATKECRT-LPNYKKNLPALATFLKRNAIFGLCDA-SGDYKVVFICKLWNEKIQDAYE 181 (384)
Q Consensus 105 ~~~s~~GLl~~~~-~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~-~~~ykvv~~~~~~~~~~~~~~~ 181 (384)
+.++.+|.+.+-+ .+...++|..+++... ..... . .....+.+.|. .+.+-+..- .
T Consensus 89 ~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~v~~~~~~~~~~~~~l~s~s-----~------- 147 (343)
T 3lrv_A 89 ISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS-A--------NEIIYMYGHNEVNTEYFIWAD-----N------- 147 (343)
T ss_dssp EEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC-S--------SCEEEEECCC---CCEEEEEE-----T-------
T ss_pred EEecCCCeEEEEEccCceEEeecCCcceeEEeecCC-C--------CCEEEEEcCCCCCCCEEEEEe-----C-------
Confidence 3445566665554 3466667776766322 11100 0 12344555552 223322111 1
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEE--ECceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNAN--LNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTP 259 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~ 259 (384)
.-.+.+|+.+++.-..........+ -.++. -+|.+...+ ...+.|..+|+.+..-....+.......
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~~~------i~~~~~~pdg~~lasg-----~~dg~i~iwd~~~~~~~~~~~~~~h~~~ 216 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSDVE------YSSGVLHKDSLLLALY-----SPDGILDVYNLSSPDQASSRFPVDEEAK 216 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSSCC------CCEEEECTTSCEEEEE-----CTTSCEEEEESSCTTSCCEECCCCTTSC
T ss_pred CCcEEEEECCCCcEEEEEecCCCCc------eEEEEECCCCCEEEEE-----cCCCEEEEEECCCCCCCccEEeccCCCC
Confidence 4567888887765422111100000 01122 245544443 3467888899987654312222201122
Q ss_pred ceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCC--ccc---cceEEEeCCEEEEE-Ee-CCeEEEEECC
Q 038188 260 FESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFL--GVK---SPCGFWKNNAVLME-SI-NGKLLLYDLV 331 (384)
Q Consensus 260 ~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~--~~~---~~~~~~~~~~il~~-~~-~~~l~~yd~~ 331 (384)
-..+... +|...+... + ..+.||-+.... ....+.++. ... .-+.+..++..++. .. ++.+.+|+.+
T Consensus 217 v~~l~fs~~g~~l~s~~-~--~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 217 IKEVKFADNGYWMVVEC-D--QTVVCFDLRKDV--GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp EEEEEECTTSSEEEEEE-S--SBEEEEETTSST--TCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeCCCCEEEEEe-C--CeEEEEEcCCCC--cceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 2233333 555444444 3 389999887611 111111110 011 12556666766555 33 6778888774
Q ss_pred --CCeEEE
Q 038188 332 --VQEMRD 337 (384)
Q Consensus 332 --t~~~~~ 337 (384)
++.|+.
T Consensus 292 ~~~~~~~~ 299 (343)
T 3lrv_A 292 KKTKNWTK 299 (343)
T ss_dssp TTTCSEEE
T ss_pred ccccceEe
Confidence 445664
No 154
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=46.73 E-value=1.5e+02 Score=26.05 Aligned_cols=121 Identities=6% Similarity=-0.068 Sum_probs=56.8
Q ss_pred ccEEEEEEcCCceeeeecCCCCCCCCceeEE-EECCeEEEEEecCCCC--eEEEEEEcCCceeE--EEEeCCCCccccce
Q 038188 234 SKLILLFRISDEEFQEIQRPCIPYTPFESLA-PLNGSIALLHLDESNQ--YIEIWVMNEMNWIQ--QFAIGPFLGVKSPC 308 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~-~~~G~L~l~~~~~~~~--~l~iW~l~~~~W~~--~~~i~~~~~~~~~~ 308 (384)
.+.+..++..+...............-..+. .-+|+..+....+... .+.+|-+....... ...+.....-..-+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~ 275 (365)
T 4h5i_A 196 GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSM 275 (365)
T ss_dssp SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEE
T ss_pred ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeE
Confidence 3455566665554433222111111111222 2367766655443333 44455554422222 22332222112234
Q ss_pred EEEeCCEEEEE-EeCCeEEEEECCCCeEEEEeeccCCCCcceEEEEEEec
Q 038188 309 GFWKNNAVLME-SINGKLLLYDLVVQEMRDLGRFSSGELGAAILIYCYKE 357 (384)
Q Consensus 309 ~~~~~~~il~~-~~~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~~~~y~~ 357 (384)
++.+++.++.. ..++.+.+||+++++.-.--..+.. .....+-|-|
T Consensus 276 ~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~---~~V~~v~fSp 322 (365)
T 4h5i_A 276 DVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHS---FAITEVTISP 322 (365)
T ss_dssp EECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSS---SCEEEEEECT
T ss_pred EECCCCCceEEEcCCCEEEEEECCCCcEEEEecCccc---CCEEEEEECC
Confidence 55667776555 5577899999999875432223443 3344455544
No 155
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=46.63 E-value=26 Score=25.68 Aligned_cols=42 Identities=10% Similarity=-0.001 Sum_probs=29.0
Q ss_pred CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEE
Q 038188 119 GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFIC 169 (384)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 169 (384)
-.+++.+|.|++|...-... +.....+.+|...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~~~---------g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGGST---------GFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEEEGGGCC---------SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceEECCCCC---------CceEEEEEEECCCCEEEEEEEE
Confidence 35788999999775432111 1344678889888899998874
No 156
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=46.28 E-value=5.5 Score=36.11 Aligned_cols=30 Identities=0% Similarity=-0.102 Sum_probs=18.0
Q ss_pred ceEEECceEEEEEeecCCCCccEEEEEEcCCc--eeee
Q 038188 214 NNANLNGVFYWFVSRAGDFHSKLILLFRISDE--EFQE 249 (384)
Q Consensus 214 ~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~--~~~~ 249 (384)
.++..+|.+|.-.. .+.|.++|..+. .|+.
T Consensus 4 sP~v~~~~v~~gs~------dg~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 4 TVTLPETLLFVSTL------DGSLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ----CTTEEEEEET------TSEEEEEETTTCCEEEEE
T ss_pred CCeeeCCEEEEEcC------CCEEEEEECCCCCEEEEe
Confidence 45667788876653 578999998654 4543
No 157
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=45.79 E-value=1.1e+02 Score=26.23 Aligned_cols=66 Identities=9% Similarity=0.130 Sum_probs=37.2
Q ss_pred CeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEEEEE-EeCCeEEEEECCCCeE
Q 038188 268 GSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAVLME-SINGKLLLYDLVVQEM 335 (384)
Q Consensus 268 G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~t~~~ 335 (384)
+.+.+....+ ..+.||-+++........+.....-..-+.+..++.+++. ..++.+.+||+++++.
T Consensus 48 ~~~l~tgs~D--~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~ 114 (321)
T 3ow8_A 48 SETVVTGSLD--DLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 114 (321)
T ss_dssp -CEEEEEETT--SCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCEEEEEcCC--CCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCE
Confidence 3444444444 7899998876444444444333311222334445555444 5577899999998764
No 158
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=45.62 E-value=1.6e+02 Score=25.87 Aligned_cols=99 Identities=15% Similarity=0.182 Sum_probs=55.6
Q ss_pred CCccEEEEEEcCCceeee-ecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceE
Q 038188 232 FHSKLILLFRISDEEFQE-IQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCG 309 (384)
Q Consensus 232 ~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~ 309 (384)
...+.|..+|+.+.+... +... ...-..+... +|++.++...+ ..+.+|-+.... .+..+........-+.
T Consensus 224 ~~~g~i~~~d~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~--~~~~~~~~~~~i~~~~ 296 (425)
T 1r5m_A 224 GPKGAIFVYQITEKTPTGKLIGH---HGPISVLEFNDTNKLLLSASDD--GTLRIWHGGNGN--SQNCFYGHSQSIVSAS 296 (425)
T ss_dssp CGGGCEEEEETTCSSCSEEECCC---SSCEEEEEEETTTTEEEEEETT--SCEEEECSSSBS--CSEEECCCSSCEEEEE
T ss_pred cCCCeEEEEEcCCCceeeeeccC---CCceEEEEECCCCCEEEEEcCC--CEEEEEECCCCc--cceEecCCCccEEEEE
Confidence 346788999998764332 2211 1122233333 56655555544 789999887522 1222322222223344
Q ss_pred EEeCCEEEEEEeCCeEEEEECCCCeEEE
Q 038188 310 FWKNNAVLMESINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 310 ~~~~~~il~~~~~~~l~~yd~~t~~~~~ 337 (384)
+.+++.++....++.+.+||+++++...
T Consensus 297 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 297 WVGDDKVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp EETTTEEEEEETTSEEEEEETTTTEEEE
T ss_pred ECCCCEEEEEeCCCcEEEEECCCCcEeE
Confidence 5556655555678889999999887544
No 159
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=45.17 E-value=13 Score=22.20 Aligned_cols=21 Identities=29% Similarity=0.276 Sum_probs=15.6
Q ss_pred ccccCCCCHHHHHHHHccCCh
Q 038188 8 IASSMLMPEDVRLEILSRLPV 28 (384)
Q Consensus 8 ~~~~~~LP~dll~eIl~rLp~ 28 (384)
+.....||.||.+|||+--..
T Consensus 18 ~eVF~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 18 QEVFKQLPADIQEEILSGKSR 38 (48)
T ss_dssp GGGTTTSCHHHHHHHTTCCCS
T ss_pred HHHHHHCcHHHHHHHHhcchH
Confidence 445678999999998876543
No 160
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=44.87 E-value=1.5e+02 Score=25.48 Aligned_cols=70 Identities=10% Similarity=0.092 Sum_probs=40.5
Q ss_pred CCeEEEEEecCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCEEEEE-EeCCeEEEEECCCCeEEEE
Q 038188 267 NGSIALLHLDESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNAVLME-SINGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~v 338 (384)
+|++.+....+ ..+.||-+.+ ..+..+..+..+..-..-+.+.+++.+++. ..++.+.+||..++..+.+
T Consensus 118 ~g~~las~s~D--~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 118 DGYYLATCSRD--KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECV 190 (330)
T ss_dssp TSCEEEEEETT--SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCEEEEEeCC--CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEE
Confidence 34444444444 7889998854 456666665543322233444455555554 4567788898877754443
No 161
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=44.75 E-value=35 Score=25.07 Aligned_cols=43 Identities=12% Similarity=0.039 Sum_probs=29.1
Q ss_pred CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEE
Q 038188 119 GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFIC 169 (384)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 169 (384)
-.+++.||.|++|. |..... .......+.+|...+.|.|+...
T Consensus 11 A~V~~~d~~~~~W~--p~~~g~------~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 11 ATVMLYDDGNKRWL--PAGTGP------QAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp EECBEECTTTSSCC--BSSCSC------CCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCcee--ECCCCC------CCccEEEEEEeCCCCEEEEEEEE
Confidence 35688999999975 433210 01335678889888899998874
No 162
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=44.73 E-value=92 Score=26.42 Aligned_cols=109 Identities=11% Similarity=0.027 Sum_probs=51.8
Q ss_pred EEECceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCC---CceeE-EEECCeEEEEEecCCCCeEEEEEEcC-C
Q 038188 216 ANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYT---PFESL-APLNGSIALLHLDESNQYIEIWVMNE-M 290 (384)
Q Consensus 216 v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~---~~~~l-~~~~G~L~l~~~~~~~~~l~iW~l~~-~ 290 (384)
+..||.++.... .....++.||.+.+....+.+...... ....+ ...+|.+.++.... ..+.+|-.+. .
T Consensus 84 ~~~dG~~lv~~~----~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~--~~v~~~d~~G~~ 157 (276)
T 3no2_A 84 ILPDGNALVAWC----GHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT--SEVREIAPNGQL 157 (276)
T ss_dssp ECTTSCEEEEEE----STTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT--TEEEEECTTSCE
T ss_pred ECCCCCEEEEec----CCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC--CEEEEECCCCCE
Confidence 344677665542 115678888886654444433221100 00111 22356655544333 4555554443 3
Q ss_pred ceeEEEEeCCCCccccceEEEeCCEEEEE-EeCCeEEEEECCCCeE
Q 038188 291 NWIQQFAIGPFLGVKSPCGFWKNNAVLME-SINGKLLLYDLVVQEM 335 (384)
Q Consensus 291 ~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~t~~~ 335 (384)
.|... ....+ .-.....++.+++. ..+++++.+|++|+++
T Consensus 158 ~w~~~--~~~~~---~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 158 LNSVK--LSGTP---FSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp EEEEE--CSSCC---CEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred EEEEE--CCCCc---cceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 34332 11111 11222345666555 4455799999996654
No 163
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=44.67 E-value=1.5e+02 Score=25.31 Aligned_cols=139 Identities=8% Similarity=-0.068 Sum_probs=77.6
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEE-ECceEEEEEeecCCCCccEEEEEEcCCcee-eeecCCCCCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNAN-LNGVFYWFVSRAGDFHSKLILLFRISDEEF-QEIQRPCIPYTP 259 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~ 259 (384)
...+.+++..|++=...-... ..+. ..++. .++.+|... ...+.+..+|..+.+- ..|+.+ . ..
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~-~~~f-----geGi~~~g~~lyv~t-----~~~~~v~viD~~t~~v~~~i~~g-~--~~ 108 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMD-DSYF-----GEGLTLLNEKLYQVV-----WLKNIGFIYDRRTLSNIKNFTHQ-M--KD 108 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECC-TTCC-----EEEEEEETTEEEEEE-----TTCSEEEEEETTTTEEEEEEECC-S--SS
T ss_pred CCEEEEEECCCCCEEEEEecC-CCcc-----eEEEEEeCCEEEEEE-----ecCCEEEEEECCCCcEEEEEECC-C--CC
Confidence 467888888887532211110 1111 11233 356888887 4578899999987544 456665 1 12
Q ss_pred ceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCC---ccccc--eEEEeCCEEEEEEe-CCeEEEEECCCC
Q 038188 260 FESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFL---GVKSP--CGFWKNNAVLMESI-NGKLLLYDLVVQ 333 (384)
Q Consensus 260 ~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~---~~~~~--~~~~~~~~il~~~~-~~~l~~yd~~t~ 333 (384)
...+..-+++|++.. . .. .|++++-.+-..+.+|.... .+..| +.+. ++.++.... .+.+...|++|+
T Consensus 109 g~glt~Dg~~l~vs~-g--s~--~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg 182 (266)
T 2iwa_A 109 GWGLATDGKILYGSD-G--TS--ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDG 182 (266)
T ss_dssp CCEEEECSSSEEEEC-S--SS--EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTC
T ss_pred eEEEEECCCEEEEEC-C--CC--eEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCC
Confidence 234554456677643 2 12 67777764444444543211 01111 1223 678876654 567999999998
Q ss_pred eE-EEEee
Q 038188 334 EM-RDLGR 340 (384)
Q Consensus 334 ~~-~~v~~ 340 (384)
++ +.+..
T Consensus 183 ~V~~~I~~ 190 (266)
T 2iwa_A 183 TLLGWILL 190 (266)
T ss_dssp CEEEEEEC
T ss_pred cEEEEEEC
Confidence 75 45554
No 164
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=44.03 E-value=1.8e+02 Score=26.12 Aligned_cols=110 Identities=7% Similarity=0.084 Sum_probs=60.3
Q ss_pred eEEECceEEEEEeecCCCCccEEEEEEcCCceeee-ecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcC-Cce
Q 038188 215 NANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQE-IQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNE-MNW 292 (384)
Q Consensus 215 ~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~-~~W 292 (384)
++..+|.+...+ ...+.|..+|+.+.+... +... .....-+...+.+.+....+ ..+.+|-+.. ...
T Consensus 178 ~l~~~~~~l~sg-----~~dg~i~vwd~~~~~~~~~~~~h----~~~v~~l~~~~~~l~s~s~d--g~i~vwd~~~~~~~ 246 (435)
T 1p22_A 178 CLQYDERVIITG-----SSDSTVRVWDVNTGEMLNTLIHH----CEAVLHLRFNNGMMVTCSKD--RSIAVWDMASPTDI 246 (435)
T ss_dssp EEECCSSEEEEE-----ETTSCEEEEESSSCCEEEEECCC----CSCEEEEECCTTEEEEEETT--SCEEEEECSSSSCC
T ss_pred EEEECCCEEEEE-----cCCCeEEEEECCCCcEEEEEcCC----CCcEEEEEEcCCEEEEeeCC--CcEEEEeCCCCCCc
Confidence 344466655444 336778889987765432 2221 12223233345555555554 7999999877 333
Q ss_pred eEEEEeCCCCccccceEEEeCCEEEEEEeCCeEEEEECCCCeEE
Q 038188 293 IQQFAIGPFLGVKSPCGFWKNNAVLMESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 293 ~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~~~ 336 (384)
.....+........-+.+ .++.++....++.+.+||+++++..
T Consensus 247 ~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~ 289 (435)
T 1p22_A 247 TLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFV 289 (435)
T ss_dssp EEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCEE
T ss_pred eeeeEecCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcEE
Confidence 222333222211112222 4556666677888999999987653
No 165
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=43.79 E-value=2.3e+02 Score=27.40 Aligned_cols=208 Identities=10% Similarity=-0.060 Sum_probs=107.1
Q ss_pred ccccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccE
Q 038188 107 GPYDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAH 184 (384)
Q Consensus 107 ~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (384)
++.+|.|.+.+ .+.++.+++.+.....+-.... ....|+++|...+.-.+. ... ...
T Consensus 357 d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~---------~~p~GlAvD~~~~~lY~t------D~~------~~~ 415 (619)
T 3s94_A 357 DPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQI---------AHPDGIAVDWVARNLYWT------DTG------TDR 415 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---------SCCCEEEEETTTTEEEEE------ETT------TTE
T ss_pred EcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCC---------CCcCceEEecccCcEEEE------eCC------CCc
Confidence 34577777766 3567777776654433322111 133467788655432211 111 467
Q ss_pred EEEEEcCCCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCce
Q 038188 185 VAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFE 261 (384)
Q Consensus 185 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~ 261 (384)
+++.+.....-+.+... . . ..-.++.+ +|.|||... .....|..++++...-..+- .... ....
T Consensus 416 I~v~~~~G~~~~~l~~~--~----l-~~P~~iavdp~~G~ly~tD~----g~~~~I~r~~~dG~~~~~l~-~~~l-~~P~ 482 (619)
T 3s94_A 416 IEVTRLNGTMRKILISE--D----L-EEPRAIVLDPMVGYMYWTDW----GEIPKIERAALDGSDRVVLV-NTSL-GWPN 482 (619)
T ss_dssp EEEEETTSCSCEEEECT--T----C-CSEEEEEEETTTTEEEEEEC----SSSCEEEEEETTSCSCEEEE-CSSC-SCEE
T ss_pred EEEEeCCCCeEEEEEEC--C----C-CCeeeEEEEcCCCcEEEecC----CCCCEEEEEccCCCccEEEE-eCCC-CCCe
Confidence 78888765432222110 1 0 11234555 499999864 22468999988654333221 0001 1122
Q ss_pred eEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEE-eCCEEEEEEe-CCeEEEEECCCCeEEE
Q 038188 262 SLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFW-KNNAVLMESI-NGKLLLYDLVVQEMRD 337 (384)
Q Consensus 262 ~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~~~il~~~~-~~~l~~yd~~t~~~~~ 337 (384)
.|+.. +++||++.... .+++..-++. .-.+... . ..+.+|.++. .++.|++... ...+...|..++..+.
T Consensus 483 GlalD~~~~~LY~aD~~~--~~I~~~~~dG-~~~~~~~-~--~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g~~~~ 556 (619)
T 3s94_A 483 GLALDYDEGKIYWGDAKT--DKIEVMNTDG-TGRRVLV-E--DKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREV 556 (619)
T ss_dssp EEEEETTTTEEEEEETTT--TEEEEEESSS-CCCEEEE-E--CCCCSSCCEEEETTEEEEECTTSSCEEEEESSSCCEEE
T ss_pred eeEEcccCCEEEEEECCC--CEEEEEecCC-CceEEEe-c--cCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCCceEE
Confidence 34444 78899987654 5555554544 1122111 0 1234565443 2557777754 4568899999886544
Q ss_pred EeeccCCCCcceEEEEEEecc
Q 038188 338 LGRFSSGELGAAILIYCYKES 358 (384)
Q Consensus 338 v~~~~~~~~~~~~~~~~y~~s 358 (384)
+. .+.. ..+.+..|.+.
T Consensus 557 ~~-~~~~---~~~~i~~~~~~ 573 (619)
T 3s94_A 557 II-DQLP---DLMGLKATNVH 573 (619)
T ss_dssp EE-CSCC---CEEEEEEEESS
T ss_pred Ee-cCCC---CCceeeecccc
Confidence 43 2333 45556667654
No 166
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=43.70 E-value=1.8e+02 Score=28.14 Aligned_cols=113 Identities=18% Similarity=0.125 Sum_probs=58.5
Q ss_pred cceEEECceEEEEEeecCCCCccEEEEEEc-C--Cceeeee-cCCCCC------CCCceeEEE--ECCe----EEEEEec
Q 038188 213 YNNANLNGVFYWFVSRAGDFHSKLILLFRI-S--DEEFQEI-QRPCIP------YTPFESLAP--LNGS----IALLHLD 276 (384)
Q Consensus 213 ~~~v~~~G~lywl~~~~~~~~~~~il~fD~-~--~~~~~~i-~~P~~~------~~~~~~l~~--~~G~----L~l~~~~ 276 (384)
..++..+|.+|.... ..+.+.++|. . ++.|+.- ..+... ......++. .+|+ |++...+
T Consensus 56 ~tP~v~~g~vyv~~~-----~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d 130 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTS-----FPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD 130 (599)
T ss_dssp SCCEEETTEEEEECS-----TTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT
T ss_pred eccEEECCEEEEEeC-----CCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC
Confidence 357889999998652 1467999998 4 4456542 222100 001112334 4555 6554322
Q ss_pred CCCCeEEEEEEcC----CceeEEEEe-CCC-CccccceEEEeCCEEEEEEe------CCeEEEEECCCCeEEE
Q 038188 277 ESNQYIEIWVMNE----MNWIQQFAI-GPF-LGVKSPCGFWKNNAVLMESI------NGKLLLYDLVVQEMRD 337 (384)
Q Consensus 277 ~~~~~l~iW~l~~----~~W~~~~~i-~~~-~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~t~~~~~ 337 (384)
. .+..|+- ..|.....- ... .....|+. . ++.|++... ++.++.||.+|++...
T Consensus 131 ---g--~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 131 ---G--NVAALNAETGETVWKVENSDIKVGSTLTIAPYV-V-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVW 196 (599)
T ss_dssp ---S--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-E-TTEEEECCBCGGGTCCCEEEEEETTTCCEEE
T ss_pred ---C--EEEEEECCCCCEEEeecCCCCCccceeecCCEE-E-CCEEEEEecccccCCCCeEEEEECCCCcEEE
Confidence 1 2334432 346542110 000 11123433 2 677776653 5789999999988653
No 167
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=42.63 E-value=1.9e+02 Score=25.99 Aligned_cols=111 Identities=18% Similarity=0.190 Sum_probs=58.7
Q ss_pred eEEECceEEEEEeecCCCCccEEEEEEcCCcee-eeecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCcee
Q 038188 215 NANLNGVFYWFVSRAGDFHSKLILLFRISDEEF-QEIQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWI 293 (384)
Q Consensus 215 ~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~ 293 (384)
++..+|.....+ ...+.|..+|+.+.+. ..+..+... .....-+..++.+.+....+ ..+.||-++.....
T Consensus 324 ~~~~~~~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~s~~~d--g~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 324 GMELKDNILVSG-----NADSTVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQFNKNFVITSSDD--GTVKLWDLKTGEFI 395 (445)
T ss_dssp EEEEETTEEEEE-----ETTSCEEEEETTTCCEEEEECSTTSC-SSCEEEEEECSSEEEEEETT--SEEEEEETTTCCEE
T ss_pred EEEEeCCEEEEE-----eCCCeEEEEECCCCcEEEEEccCCCC-CCCEEEEEECCCEEEEEeCC--CeEEEEECCCCcee
Confidence 344556544433 3367888999976543 344444322 22233334467766666555 89999998864333
Q ss_pred EEEEeC---CCCccccceEEEeCCEEEEE-EeCC----eEEEEECCCC
Q 038188 294 QQFAIG---PFLGVKSPCGFWKNNAVLME-SING----KLLLYDLVVQ 333 (384)
Q Consensus 294 ~~~~i~---~~~~~~~~~~~~~~~~il~~-~~~~----~l~~yd~~t~ 333 (384)
...... .......-+.+.+++.++.. ..++ ++.+||.+..
T Consensus 396 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 396 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred eeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 322111 11111223444556666554 3344 3888887754
No 168
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=42.48 E-value=1.7e+02 Score=25.45 Aligned_cols=68 Identities=10% Similarity=0.075 Sum_probs=35.9
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCceeEEEE--eCCCC--ccccceEEEeCCEEEEEEeCCeEEEEECCCCeEE
Q 038188 267 NGSIALLHLDESNQYIEIWVMNEMNWIQQFA--IGPFL--GVKSPCGFWKNNAVLMESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~--i~~~~--~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~~~ 336 (384)
+|+..++...+ ..+.+|-+....-..... ..... ..........++.+++...++.+.+||+.+++..
T Consensus 256 ~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 256 DGLHLLTVGTD--NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp TSSEEEEEETT--SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred CCCEEEEecCC--CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 56655555554 789999987621111100 00000 0111111122456667777888999999887643
No 169
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=41.84 E-value=2.6e+02 Score=27.31 Aligned_cols=116 Identities=11% Similarity=0.130 Sum_probs=60.3
Q ss_pred ECceEEEEEeecCCCCccEEEEEEcCCc---eeeeecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeE
Q 038188 218 LNGVFYWFVSRAGDFHSKLILLFRISDE---EFQEIQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQ 294 (384)
Q Consensus 218 ~~G~lywl~~~~~~~~~~~il~fD~~~~---~~~~i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~ 294 (384)
-++.+|+++... .....|+..|+++. .|+.+- |... .. ......++.|.+.........+.+|-++ ..+.+
T Consensus 290 ~g~~l~~~t~~~--~~~~~l~~~d~~~~~~~~~~~l~-~~~~-~~-~~~s~~g~~lv~~~~~~g~~~l~~~d~~-g~~~~ 363 (693)
T 3iuj_A 290 KGSTLYLLTNRD--APNRRLVTVDAANPGPAHWRDLI-PERQ-QV-LTVHSGSGYLFAEYMVDATARVEQFDYE-GKRVR 363 (693)
T ss_dssp ETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEE-CCCS-SC-EEEEEETTEEEEEEEETTEEEEEEECTT-SCEEE
T ss_pred cCCEEEEEECCC--CCCCEEEEEeCCCCCccccEEEe-cCCC-CE-EEEEEECCEEEEEEEECCeeEEEEEECC-CCeeE
Confidence 356788877532 23578999999764 356531 2221 11 2444456677766665522344444333 33433
Q ss_pred EEEeCCCCccccceEEE-eCCEEEEEEeC----CeEEEEECCCCeEEEEee
Q 038188 295 QFAIGPFLGVKSPCGFW-KNNAVLMESIN----GKLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 295 ~~~i~~~~~~~~~~~~~-~~~~il~~~~~----~~l~~yd~~t~~~~~v~~ 340 (384)
.-.+ |.......+... +++.+++.... ..++.||+++++.+.+..
T Consensus 364 ~l~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 364 EVAL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp EECC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEEC
T ss_pred Eeec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEe
Confidence 2222 111111111112 24556555443 679999999988776653
No 170
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=41.71 E-value=2.5e+02 Score=27.13 Aligned_cols=107 Identities=13% Similarity=0.099 Sum_probs=55.5
Q ss_pred CccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCe-EEEEEecCCCCeEEEEEEcC--C-ceeEEEEeCCCC--ccc
Q 038188 233 HSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGS-IALLHLDESNQYIEIWVMNE--M-NWIQQFAIGPFL--GVK 305 (384)
Q Consensus 233 ~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l~~--~-~W~~~~~i~~~~--~~~ 305 (384)
....|..+|+.+.+...+.........-..+... +|+ |++...+.......||+.+- . ....+..-.... ...
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 3567899999888766554332111111233333 666 55544443335556666654 3 444433211111 012
Q ss_pred cceEEEe--CCEEEEEEe---CCeEEEEECCCCeEEEEe
Q 038188 306 SPCGFWK--NNAVLMESI---NGKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 306 ~~~~~~~--~~~il~~~~---~~~l~~yd~~t~~~~~v~ 339 (384)
..+.+.. ++++++... ...++.+|..++.++.+.
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC
Confidence 3456666 777666543 235788887777666553
No 171
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=41.05 E-value=2.7e+02 Score=27.33 Aligned_cols=96 Identities=6% Similarity=0.068 Sum_probs=48.9
Q ss_pred ccEEEEEEcCCc-eeee-ecCCCCCCCCceeEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceE
Q 038188 234 SKLILLFRISDE-EFQE-IQRPCIPYTPFESLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCG 309 (384)
Q Consensus 234 ~~~il~fD~~~~-~~~~-i~~P~~~~~~~~~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~ 309 (384)
.+.|..+|+.+. .... +... ...-..+... +|.+.++...+ ..+.+|-+....-...... ....-...+.
T Consensus 118 dg~i~vw~~~~~~~~~~~~~~~---~~~v~~~~~~p~~~~~l~~~~~d--g~v~vwd~~~~~~~~~~~~-~~~~~v~~~~ 191 (814)
T 3mkq_A 118 DLTVKLWNWENNWALEQTFEGH---EHFVMCVAFNPKDPSTFASGCLD--RTVKVWSLGQSTPNFTLTT-GQERGVNYVD 191 (814)
T ss_dssp TSEEEEEEGGGTSEEEEEEECC---SSCEEEEEEETTEEEEEEEEETT--SEEEEEETTCSSCSEEEEC-CCTTCCCEEE
T ss_pred CCEEEEEECCCCceEEEEEcCC---CCcEEEEEEEcCCCCEEEEEeCC--CeEEEEECCCCcceeEEec-CCCCCEEEEE
Confidence 677888888765 2222 2211 1112233333 34555555555 7899998875211111111 1111112233
Q ss_pred EEe--CCE-EEEEEeCCeEEEEECCCCeE
Q 038188 310 FWK--NNA-VLMESINGKLLLYDLVVQEM 335 (384)
Q Consensus 310 ~~~--~~~-il~~~~~~~l~~yd~~t~~~ 335 (384)
+.. ++. ++....++.+..||+++++.
T Consensus 192 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 192 YYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp ECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 333 444 44556677899999998774
No 172
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=40.72 E-value=1.9e+02 Score=25.54 Aligned_cols=192 Identities=10% Similarity=0.080 Sum_probs=90.3
Q ss_pred cccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEE
Q 038188 108 PYDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHV 185 (384)
Q Consensus 108 s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (384)
+.+|-.++.. ++.+.|||..+++....-.. +. .....+.+.|.. .+ ++.. .. ...+
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------h~--~~v~~~~~~p~~-~~-l~s~----s~-------d~~v 189 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQG-------HE--QDIYSLDYFPSG-DK-LVSG----SG-------DRTV 189 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------CS--SCEEEEEECTTS-SE-EEEE----ET-------TSEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-------CC--CCEEEEEEcCCC-CE-EEEe----cC-------CCcE
Confidence 4455444433 46899999988876542111 11 123345555533 32 2211 11 4667
Q ss_pred EEEEcCCCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceee-eecCCCCC---CC
Q 038188 186 AVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQ-EIQRPCIP---YT 258 (384)
Q Consensus 186 ~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~---~~ 258 (384)
.+++.+++.-...-.. . ..-..+.+ +|.+...+ ...+.|..+|+.+.... .+..+... ..
T Consensus 190 ~iwd~~~~~~~~~~~~--~------~~v~~~~~~~~~~~~l~~~-----s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~ 256 (393)
T 1erj_A 190 RIWDLRTGQCSLTLSI--E------DGVTTVAVSPGDGKYIAAG-----SLDRAVRVWDSETGFLVERLDSENESGTGHK 256 (393)
T ss_dssp EEEETTTTEEEEEEEC--S------SCEEEEEECSTTCCEEEEE-----ETTSCEEEEETTTCCEEEEEC------CCCS
T ss_pred EEEECCCCeeEEEEEc--C------CCcEEEEEECCCCCEEEEE-----cCCCcEEEEECCCCcEEEeecccccCCCCCC
Confidence 8888877643221100 0 00011221 45444333 23567888888776543 23222111 11
Q ss_pred Cc-eeEEEE-CCeEEEEEecCCCCeEEEEEEcCCc----------eeEEEEeCCCCccccceEEEeCCEEEEE-EeCCeE
Q 038188 259 PF-ESLAPL-NGSIALLHLDESNQYIEIWVMNEMN----------WIQQFAIGPFLGVKSPCGFWKNNAVLME-SINGKL 325 (384)
Q Consensus 259 ~~-~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~----------W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l 325 (384)
.. ..+... +|++.+....+ ..+.+|-+.... ......+..+.....-+.+..++..++. ..++.+
T Consensus 257 ~~v~~v~~~~~g~~l~s~s~d--~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v 334 (393)
T 1erj_A 257 DSVYSVVFTRDGQSVVSGSLD--RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 334 (393)
T ss_dssp SCEEEEEECTTSSEEEEEETT--SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEE
T ss_pred CCEEEEEECCCCCEEEEEeCC--CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeE
Confidence 11 223333 56665555555 899999887510 1111111111111222344445555444 567789
Q ss_pred EEEECCCCeEE
Q 038188 326 LLYDLVVQEMR 336 (384)
Q Consensus 326 ~~yd~~t~~~~ 336 (384)
.+||.++++..
T Consensus 335 ~iwd~~~~~~~ 345 (393)
T 1erj_A 335 LFWDKKSGNPL 345 (393)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCeEE
Confidence 99999998743
No 173
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=40.56 E-value=2.3e+02 Score=26.44 Aligned_cols=106 Identities=8% Similarity=0.023 Sum_probs=56.8
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-----------CCeEEEEEecCCCCeEEEEEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-----------NGSIALLHLDESNQYIEIWVM 287 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-----------~G~L~l~~~~~~~~~l~iW~l 287 (384)
+|.+.... ...+.|..+|+.+.+.... +.......-..+... +|++.+....+ ..+.||-+
T Consensus 499 ~g~~l~~~-----~~dg~i~iw~~~~~~~~~~-~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d--g~i~iw~~ 570 (615)
T 1pgu_A 499 SETYIAAG-----DVMGKILLYDLQSREVKTS-RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD--TNIFIYSV 570 (615)
T ss_dssp TSSEEEEE-----ETTSCEEEEETTTTEEEEC-CSCCCSSCEEEEEECCCC------CCSCCEEEEEETT--SCEEEEES
T ss_pred CCCEEEEc-----CCCCeEEEeeCCCCcceeE-eecCCCCceeEEEEcCccccccccccCCCEEEEEcCC--CcEEEEEC
Confidence 56544444 2367788899976654332 111011112223222 56666666655 79999999
Q ss_pred cCCceeEEEEeCCCCccccceEEEeCCEEEEEEeCCeEEEEECCCC
Q 038188 288 NEMNWIQQFAIGPFLGVKSPCGFWKNNAVLMESINGKLLLYDLVVQ 333 (384)
Q Consensus 288 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~ 333 (384)
+... ..+..+..+..-..-+.+..++.++....++.+.+||++++
T Consensus 571 ~~~~-~~~~~~~~h~~~v~~l~~s~~~~l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 571 KRPM-KIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNVVLE 615 (615)
T ss_dssp SCTT-CCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEEEEC--
T ss_pred CCCc-eechhhhcCccceEEEEEcCCCCeEEecCCceEEEEeeecC
Confidence 8621 23333333332233455667777333455777999998763
No 174
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=40.21 E-value=62 Score=21.10 Aligned_cols=17 Identities=18% Similarity=0.182 Sum_probs=14.1
Q ss_pred eEEEEECCCCeEEEEee
Q 038188 324 KLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 324 ~l~~yd~~t~~~~~v~~ 340 (384)
+++.||.++++++-+..
T Consensus 41 KIykyde~tNeI~LkKE 57 (72)
T 3kvp_A 41 KIYEYNESRNEVKLKKE 57 (72)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEeCCCCCeEEEEEe
Confidence 79999999999876543
No 175
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=39.96 E-value=2.7e+02 Score=26.98 Aligned_cols=108 Identities=12% Similarity=0.032 Sum_probs=57.6
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQF 296 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~ 296 (384)
+|.|||.. ...+.|..+++....-+.+--. .. .....|++- +|.||+..... ...+...-++.. =....
T Consensus 403 ~~~lY~tD-----~~~~~I~v~~~~G~~~~~l~~~-~l-~~P~~iavdp~~G~ly~tD~g~-~~~I~r~~~dG~-~~~~l 473 (619)
T 3s94_A 403 ARNLYWTD-----TGTDRIEVTRLNGTMRKILISE-DL-EEPRAIVLDPMVGYMYWTDWGE-IPKIERAALDGS-DRVVL 473 (619)
T ss_dssp TTEEEEEE-----TTTTEEEEEETTSCSCEEEECT-TC-CSEEEEEEETTTTEEEEEECSS-SCEEEEEETTSC-SCEEE
T ss_pred cCcEEEEe-----CCCCcEEEEeCCCCeEEEEEEC-CC-CCeeeEEEEcCCCcEEEecCCC-CCEEEEEccCCC-ccEEE
Confidence 68999986 4478899999876644333211 11 222345554 68899876543 234443334431 11111
Q ss_pred EeCCCCccccceEE--Ee-CCEEEEEEe-CCeEEEEECCCCeEEEE
Q 038188 297 AIGPFLGVKSPCGF--WK-NNAVLMESI-NGKLLLYDLVVQEMRDL 338 (384)
Q Consensus 297 ~i~~~~~~~~~~~~--~~-~~~il~~~~-~~~l~~yd~~t~~~~~v 338 (384)
+. ..+..|.++ .. ++.|++... .+++..+|++....+.+
T Consensus 474 -~~--~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~ 516 (619)
T 3s94_A 474 -VN--TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVL 516 (619)
T ss_dssp -EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE
T ss_pred -Ee--CCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 11 123455443 32 466766643 45677777766655444
No 176
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=39.94 E-value=1.8e+02 Score=24.86 Aligned_cols=65 Identities=14% Similarity=0.255 Sum_probs=38.6
Q ss_pred eEEEEEecCCCCeEEEEEEcC--Cce-eEEEEeCCCCccccceEEEeCCEEEEE-EeCCeEEEEECCCCeE
Q 038188 269 SIALLHLDESNQYIEIWVMNE--MNW-IQQFAIGPFLGVKSPCGFWKNNAVLME-SINGKLLLYDLVVQEM 335 (384)
Q Consensus 269 ~L~l~~~~~~~~~l~iW~l~~--~~W-~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~t~~~ 335 (384)
.+.+....+ ..+.+|-+.. ... ..+..+..+......+.+..++..++. ..++.+.+||+++++.
T Consensus 31 ~~l~s~s~D--~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~ 99 (319)
T 3frx_A 31 NLLLSASRD--KTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGET 99 (319)
T ss_dssp TEEEEEETT--SEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred cEEEEecCC--ccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCe
Confidence 455555555 8899998865 222 223333333322233455556665554 5678899999999874
No 177
>3s3x_D Psalmotoxin-1; acid-sensing, ION channel, membrane protein, sodium channel, membrane, glycoprotein, ION transport, membrane; HET: NAG; 2.99A {Psalmopoeus cambridgei} PDB: 2kni_A 1lmm_A 4fz0_M* 4fz1_D*
Probab=39.85 E-value=15 Score=19.78 Aligned_cols=22 Identities=18% Similarity=0.267 Sum_probs=18.4
Q ss_pred ccccceEEEeeCCeEEEEccCc
Q 038188 107 GPYDGIFCLCDGGLITLWNPAT 128 (384)
Q Consensus 107 ~s~~GLl~~~~~~~~~V~NP~T 128 (384)
++|.||-|......+-||-|-|
T Consensus 15 dcceglecwkrrrsfevcvpkt 36 (37)
T 3s3x_D 15 DCCEGLECWKRRRSFEVCVPKT 36 (37)
T ss_dssp CBCTTEEEECCSSSCCEEEECC
T ss_pred chhhhHHHHHhccceeeecCCC
Confidence 5799999998888888887765
No 178
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=39.51 E-value=1.8e+02 Score=24.98 Aligned_cols=98 Identities=13% Similarity=0.120 Sum_probs=54.7
Q ss_pred ccEEEEEEcCCcee-eeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcC--CceeEEEEeCCCCccccceE
Q 038188 234 SKLILLFRISDEEF-QEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCG 309 (384)
Q Consensus 234 ~~~il~fD~~~~~~-~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~ 309 (384)
.+.|..+|+.+... ..++... ..-..+... +|++.+....+ ..+.||-++. ........+..+......+.
T Consensus 76 Dg~v~iWd~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~s~~~d--~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~ 150 (340)
T 1got_B 76 DGKLIIWDSYTTNKVHAIPLRS---SWVMTCAYAPSGNYVACGGLD--NICSIYNLKTREGNVRVSRELAGHTGYLSCCR 150 (340)
T ss_dssp TTEEEEEETTTCCEEEEEECSS---SCEEEEEECTTSSEEEEEETT--CEEEEEETTTCSBSCEEEEEEECCSSCEEEEE
T ss_pred CCcEEEEECCCCCcceEeecCC---ccEEEEEECCCCCEEEEEeCC--CeEEEEECccCCCcceeEEEecCCCccEEEEE
Confidence 55667777655433 2233221 111222222 55555555444 7899999875 23333333333332223344
Q ss_pred EEeCCEEEEEEeCCeEEEEECCCCeEE
Q 038188 310 FWKNNAVLMESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 310 ~~~~~~il~~~~~~~l~~yd~~t~~~~ 336 (384)
+.+++.++....++.+.+||+++++..
T Consensus 151 ~~~~~~l~s~s~d~~i~~wd~~~~~~~ 177 (340)
T 1got_B 151 FLDDNQIVTSSGDTTCALWDIETGQQT 177 (340)
T ss_dssp EEETTEEEEEETTSCEEEEETTTTEEE
T ss_pred ECCCCcEEEEECCCcEEEEECCCCcEE
Confidence 556778777777888999999998754
No 179
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=38.93 E-value=3e+02 Score=27.27 Aligned_cols=204 Identities=11% Similarity=0.082 Sum_probs=97.8
Q ss_pred cccceEEEee-CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEE
Q 038188 108 PYDGIFCLCD-GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVA 186 (384)
Q Consensus 108 s~~GLl~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 186 (384)
..+|-+.+.. .+.++++||.++++......+.... .. .......+..|.. +. +.+.. ...+.
T Consensus 223 d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~-~l-~~~~i~~i~~d~~-g~---lWigt-----------~~Gl~ 285 (795)
T 4a2l_A 223 QSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPK-SI-SSNYIRSLAMDSQ-NR---LWIGT-----------FNDLN 285 (795)
T ss_dssp EETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTT-SC-SCSBEEEEEECTT-SC---EEEEE-----------SSCEE
T ss_pred cCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCcc-cc-CCCeEEEEEEcCC-CC---EEEEe-----------CChhh
Confidence 3456666555 4578999999988776643321000 00 0012222333332 11 11111 12566
Q ss_pred EEEcCCCccccccCCccccceeec-CCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCC----CCC
Q 038188 187 VYTSSTDSWRVSKGNIKWIPYVFE-SYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIP----YTP 259 (384)
Q Consensus 187 vyss~t~~W~~~~~~~~~~~~~~~-~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~----~~~ 259 (384)
+|+..++.+......... +.... ..-.+++. +|.+ |+.. ..+.|..+|..+..|+.+...... ...
T Consensus 286 ~~~~~~~~~~~~~~~~~~-~~~l~~~~i~~i~~D~~g~l-Wigt-----~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~ 358 (795)
T 4a2l_A 286 IYHEGTDSFASYSSNPVE-NGSLSQRSVRSIFMDSQGGM-WLGT-----YFGGLNYYHPIRNRFKNIRNIPYKNSLSDNV 358 (795)
T ss_dssp EEETTTTEEEEECCCTTS-TTSCSSSCEEEEEECTTSCE-EEEE-----SSSCEEEECGGGGSSEEECCCTTSSSCSCSS
T ss_pred eEcCCCCeEEEEecCCCC-CCCCCCCcEEEEEEeCCcCE-EEEE-----CCCCeEEeCCCcccceEEcCCCCCCCCCCCe
Confidence 788887777654321100 00000 11123333 3554 6663 257889999998888776432211 111
Q ss_pred ceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCC------C-CccccceEEEeCCE-EEEEEeCCeEEEEEC
Q 038188 260 FESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGP------F-LGVKSPCGFWKNNA-VLMESINGKLLLYDL 330 (384)
Q Consensus 260 ~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~------~-~~~~~~~~~~~~~~-il~~~~~~~l~~yd~ 330 (384)
-..+.+. +|.|.+.... ..+..|-.+...+.... ..+ . ......+....++. +.+.+..+.++.||.
T Consensus 359 V~~i~~d~~g~lWiGt~~---~Gl~~~~~~~~~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTND---GGLNLYNPITQRFTSYT-LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp EEEEEECTTSCEEEEESS---SCEEEECTTTCCEEEEC-CC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred eEEEEECCCCCEEEEECC---CCeEEEcCCCCcEEEEe-cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 2233333 5566664432 23333322223343321 111 0 11112223334677 777776567999999
Q ss_pred CCCeEEEEe
Q 038188 331 VVQEMRDLG 339 (384)
Q Consensus 331 ~t~~~~~v~ 339 (384)
++++++.+.
T Consensus 435 ~~~~~~~~~ 443 (795)
T 4a2l_A 435 NSGQVENFN 443 (795)
T ss_dssp TTCCEEEEC
T ss_pred CCCcEEEee
Confidence 999887764
No 180
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=38.47 E-value=2.6e+02 Score=26.39 Aligned_cols=192 Identities=10% Similarity=0.080 Sum_probs=96.5
Q ss_pred ccceEEEee--CCeEEEEccCcccccc-cCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEE
Q 038188 109 YDGIFCLCD--GGLITLWNPATKECRT-LPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHV 185 (384)
Q Consensus 109 ~~GLl~~~~--~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 185 (384)
-+|.+++.. .+.+.|+|+.|++... ++... ...++.++|.. .|-.+.- . ...+
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-----------~~~~v~~spdg-~~l~v~~-----~-------d~~V 202 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-----------AVHISRMSASG-RYLLVIG-----R-------DARI 202 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECST-----------TEEEEEECTTS-CEEEEEE-----T-------TSEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCc-----------ccceEEECCCC-CEEEEEC-----C-------CCeE
Confidence 367776665 4689999999987653 32110 12245555532 3333221 1 3567
Q ss_pred EEEEc--CCCccccccCCccccceeecCCcceEEE------CceEEEEEeecCCCCccEEEEEEcCCcee-eeecCCCCC
Q 038188 186 AVYTS--STDSWRVSKGNIKWIPYVFESYYNNANL------NGVFYWFVSRAGDFHSKLILLFRISDEEF-QEIQRPCIP 256 (384)
Q Consensus 186 ~vyss--~t~~W~~~~~~~~~~~~~~~~~~~~v~~------~G~lywl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~ 256 (384)
.+|+. .++. .+... +. ...-..+.+ +|..-+... .....|..+|..+.+. ..++.+...
T Consensus 203 ~v~D~~~~t~~--~~~~i----~~--g~~p~~va~sp~~~~dg~~l~v~~----~~~~~v~v~D~~t~~~~~~i~~~g~~ 270 (543)
T 1nir_A 203 DMIDLWAKEPT--KVAEI----KI--GIEARSVESSKFKGYEDRYTIAGA----YWPPQFAIMDGETLEPKQIVSTRGMT 270 (543)
T ss_dssp EEEETTSSSCE--EEEEE----EC--CSEEEEEEECCSTTCTTTEEEEEE----EESSEEEEEETTTCCEEEEEECCEEC
T ss_pred EEEECcCCCCc--EEEEE----ec--CCCcceEEeCCCcCCCCCEEEEEE----ccCCeEEEEeccccccceeecccCcc
Confidence 88888 4432 12111 10 000112222 565444443 2257788899877654 345543210
Q ss_pred -C------C-CceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEEEEE-E-eCCeE
Q 038188 257 -Y------T-PFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAVLME-S-INGKL 325 (384)
Q Consensus 257 -~------~-~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~-~~~~l 325 (384)
. . .-..+... +|...++.... ...+.+|-+.+..-.++.++.. ....+.+++..+++.++. . .++.+
T Consensus 271 ~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-~g~i~vvd~~~~~~l~~~~i~~-~~~~~~~~~spdg~~l~va~~~~~~v 348 (543)
T 1nir_A 271 VDTQTYHPEPRVAAIIASHEHPEFIVNVKE-TGKVLLVNYKDIDNLTVTSIGA-APFLHDGGWDSSHRYFMTAANNSNKV 348 (543)
T ss_dssp SSSCCEESCCCEEEEEECSSSSEEEEEETT-TTEEEEEECTTSSSCEEEEEEC-CSSCCCEEECTTSCEEEEEEGGGTEE
T ss_pred cCccccccCCceEEEEECCCCCEEEEEECC-CCeEEEEEecCCCcceeEEecc-CcCccCceECCCCCEEEEEecCCCeE
Confidence 0 1 11233333 34444443332 3677777665522122233432 223445667777775444 3 35679
Q ss_pred EEEECCCCeEEEE
Q 038188 326 LLYDLVVQEMRDL 338 (384)
Q Consensus 326 ~~yd~~t~~~~~v 338 (384)
.++|.+++++...
T Consensus 349 ~v~D~~tg~l~~~ 361 (543)
T 1nir_A 349 AVIDSKDRRLSAL 361 (543)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEECCCCeEEEe
Confidence 9999999987553
No 181
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=37.71 E-value=1.5e+02 Score=25.28 Aligned_cols=68 Identities=9% Similarity=0.035 Sum_probs=38.8
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEe--CCEE-EEEEeCCeEEEEECCCCeEE
Q 038188 267 NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWK--NNAV-LMESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~--~~~i-l~~~~~~~l~~yd~~t~~~~ 336 (384)
+|++.+....+ ..+.||-++......+..+..+..-..-+.+.. ++.+ +-...++.+.+||+++++++
T Consensus 24 ~g~~lasgs~D--~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 24 YGTRLATCSSD--RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE 94 (316)
T ss_dssp GGCEEEEEETT--TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC
T ss_pred CCCEEEEEeCC--CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce
Confidence 55655555555 789999987644444444433332222233322 2444 44456778999999987543
No 182
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=37.17 E-value=2e+02 Score=24.66 Aligned_cols=60 Identities=13% Similarity=0.228 Sum_probs=37.5
Q ss_pred CeEEEEEEcC------CceeEEEEeCC-CCccccceEEEeCCEEEEEEeCCeEEEEECCCCeEEEEe
Q 038188 280 QYIEIWVMNE------MNWIQQFAIGP-FLGVKSPCGFWKNNAVLMESINGKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 280 ~~l~iW~l~~------~~W~~~~~i~~-~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~~~~v~ 339 (384)
..+.||-+.. ..|.....+.. ...-...+.+..++.++....++.+.+||..+++++.+.
T Consensus 221 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 221 STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFA 287 (330)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEE
T ss_pred CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEe
Confidence 7899998864 35666655532 221122333444555555667888999999988765543
No 183
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.14 E-value=30 Score=23.07 Aligned_cols=19 Identities=5% Similarity=0.219 Sum_probs=15.6
Q ss_pred EEEEEeCCeEEEEECCCCe
Q 038188 316 VLMESINGKLLLYDLVVQE 334 (384)
Q Consensus 316 il~~~~~~~l~~yd~~t~~ 334 (384)
.++.+.++++|+||..|++
T Consensus 23 ~~v~T~dGR~fyyN~~Tk~ 41 (73)
T 2dk7_A 23 CVVWTGDERVFFYNPTTRL 41 (73)
T ss_dssp EEEEESSSCEEEEETTTTE
T ss_pred EEEECCCCCEEEecCcccc
Confidence 3455778899999999996
No 184
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=36.12 E-value=1.9e+02 Score=24.22 Aligned_cols=64 Identities=6% Similarity=0.127 Sum_probs=39.8
Q ss_pred CeEEEEEecCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeC---CEEEEE-EeCCeEEEEECCCC
Q 038188 268 GSIALLHLDESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKN---NAVLME-SINGKLLLYDLVVQ 333 (384)
Q Consensus 268 G~L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~il~~-~~~~~l~~yd~~t~ 333 (384)
+++.+....+ ..+.||-+.. ..|.....+..+.....-+.+.++ +..+.. ..++.+.+||+++.
T Consensus 170 ~~~l~sgs~D--~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 170 SRKFVTGGAD--NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp CCEEEEEETT--SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cceEEEEcCC--CcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 3444444444 7899999876 457776666544433334455554 355544 55778999998874
No 185
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=35.82 E-value=2.4e+02 Score=25.15 Aligned_cols=88 Identities=15% Similarity=0.211 Sum_probs=51.0
Q ss_pred eeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEEEE-EEeCCe
Q 038188 247 FQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAVLM-ESINGK 324 (384)
Q Consensus 247 ~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~ 324 (384)
++.+..|...+.....++.. .+.+..+.. + ..+.||-.+.+.-.++...........-+.+.+++..++ ...++.
T Consensus 94 ~~~l~ap~~~~d~y~~~l~wS~~n~lAvgl-d--~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~ 170 (420)
T 4gga_A 94 DRILDAPEIRNDYYLNLVDWSSGNVLAVAL-D--NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE 170 (420)
T ss_dssp SEEEECTTCCCCTTCBCEEECTTSEEEEEE-T--TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred ceEEECCCCcccccceeEEECCCCEEEEEe-C--CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCe
Confidence 44556666554444444443 334333333 3 789999887655555555433222233455556666544 466788
Q ss_pred EEEEECCCCeEEE
Q 038188 325 LLLYDLVVQEMRD 337 (384)
Q Consensus 325 l~~yd~~t~~~~~ 337 (384)
+.+||+++++...
T Consensus 171 v~iWd~~~~~~~~ 183 (420)
T 4gga_A 171 VQLWDVQQQKRLR 183 (420)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEEcCCCcEEE
Confidence 9999999987543
No 186
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=35.73 E-value=2.2e+02 Score=24.78 Aligned_cols=58 Identities=16% Similarity=0.209 Sum_probs=34.6
Q ss_pred CeEEEEEEcCC--ceeEEEEeCCCCccccceEEEeCCEEEEE-EeCCeEEEEECCCCeEEE
Q 038188 280 QYIEIWVMNEM--NWIQQFAIGPFLGVKSPCGFWKNNAVLME-SINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 280 ~~l~iW~l~~~--~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~ 337 (384)
..+.||-++.. ..........+.....-+.+..++..++. ..++.+.+||+++++...
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 78999998762 22222222222222234555566665554 557789999999987543
No 187
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=35.53 E-value=1.9e+02 Score=25.17 Aligned_cols=75 Identities=8% Similarity=0.010 Sum_probs=41.2
Q ss_pred eEEE--CceEEEEEeecCCCCccEEEEEEcCCce-eeeecCCCCC---CCCceeEEEE--CCeEEEEEecC-CCCeEEEE
Q 038188 215 NANL--NGVFYWFVSRAGDFHSKLILLFRISDEE-FQEIQRPCIP---YTPFESLAPL--NGSIALLHLDE-SNQYIEIW 285 (384)
Q Consensus 215 ~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~-~~~i~~P~~~---~~~~~~l~~~--~G~L~l~~~~~-~~~~l~iW 285 (384)
++.+ +|.|||+...........|+.||+.+.+ ...+.+|... ....-.++.. +|.+++..... ....+.+|
T Consensus 71 gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp EEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 4555 4889887631000014689999998777 5667776432 1112345554 46677765410 12566666
Q ss_pred EEcC
Q 038188 286 VMNE 289 (384)
Q Consensus 286 ~l~~ 289 (384)
-++.
T Consensus 151 d~~~ 154 (343)
T 2qe8_A 151 DLQT 154 (343)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 5543
No 188
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=35.24 E-value=1.7e+02 Score=24.55 Aligned_cols=96 Identities=13% Similarity=0.011 Sum_probs=0.0
Q ss_pred EEEEEEcCCceeeeecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE
Q 038188 236 LILLFRISDEEFQEIQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA 315 (384)
Q Consensus 236 ~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ 315 (384)
.|..+|+.+.+...+.++............-+|+..++. ...+.+|-++ ....+..+..............+..
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~----~~~v~~~d~~--~~~~~~~~~~~~~~~~~~~s~dg~~ 293 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA----YNVLESFDLE--KNASIKRVPLPHSYYSVNVSTDGST 293 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE----ESEEEEEETT--TTEEEEEEECSSCCCEEEECTTSCE
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe----CCeEEEEECC--CCcCcceecCCCceeeEEECCCCCE
Q ss_pred EEEEEeCCeEEEEECCCCeEEE
Q 038188 316 VLMESINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 316 il~~~~~~~l~~yd~~t~~~~~ 337 (384)
+++...++.+.+||+++++...
T Consensus 294 l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 294 VWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EEEESBSSEEEEEETTTCCEEE
T ss_pred EEEEcCCCcEEEEECcCCcEEE
No 189
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=34.73 E-value=3.3e+02 Score=26.43 Aligned_cols=209 Identities=11% Similarity=-0.028 Sum_probs=107.2
Q ss_pred ccccceEEEee--CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccE
Q 038188 107 GPYDGIFCLCD--GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAH 184 (384)
Q Consensus 107 ~s~~GLl~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (384)
+..+|.|.+.+ .+.++.+++..+....+-.... ....|+++|...+.-.+. .. ...+
T Consensus 45 d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~---------~~P~GlAvD~~~~~LY~t------D~------~~~~ 103 (628)
T 4a0p_A 45 DVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL---------DYPEGMAVDWLGKNLYWA------DT------GTNR 103 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC---------SCCCEEEEETTTTEEEEE------ET------TTTE
T ss_pred ECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC---------CCcceEEEEeCCCEEEEE------EC------CCCE
Confidence 44567777665 3567777776554433322221 133467777665432221 11 0467
Q ss_pred EEEEEcCCCccccccCCccccceeecCCcceEEE---CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCce
Q 038188 185 VAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL---NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFE 261 (384)
Q Consensus 185 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~ 261 (384)
+++++.....=+.+... .+ ....++.+ +|.|||... .....|..++++...-+.+-- .. ....
T Consensus 104 I~v~~~dG~~~~~l~~~--~l-----~~P~~iavdp~~G~lY~tD~----g~~~~I~r~~~dG~~~~~l~~--~~-~~P~ 169 (628)
T 4a0p_A 104 IEVSKLDGQHRQVLVWK--DL-----DSPRALALDPAEGFMYWTEW----GGKPKIDRAAMDGSERTTLVP--NV-GRAN 169 (628)
T ss_dssp EEEEETTSTTCEEEECS--SC-----CCEEEEEEETTTTEEEEEEC----SSSCEEEEEETTSCSCEEEEC--SC-SSEE
T ss_pred EEEEecCCCcEEEEEeC--CC-----CCcccEEEccCCCeEEEeCC----CCCCEEEEEeCCCCceEEEEC--CC-CCcc
Confidence 78888754321111100 11 01134444 599999763 236789999997665444311 11 1122
Q ss_pred eEEEE--CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEE-eCCEEEEEEe-CCeEEEEECCCCeEEE
Q 038188 262 SLAPL--NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFW-KNNAVLMESI-NGKLLLYDLVVQEMRD 337 (384)
Q Consensus 262 ~l~~~--~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~~~il~~~~-~~~l~~yd~~t~~~~~ 337 (384)
.|+.. +++||++.... ..+...-++. .-.++.. ..+.+|.++. .++.|++... .+.+..+|..+++-..
T Consensus 170 GlalD~~~~~LY~aD~~~--~~I~~~d~dG-~~~~v~~----~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 170 GLTIDYAKRRLYWTDLDT--NLIESSNMLG-LNREVIA----DDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRT 242 (628)
T ss_dssp EEEEETTTTEEEEEETTT--TEEEEEETTS-CSCEEEE----ECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred eEEEccccCEEEEEECCC--CEEEEEcCCC-CceEEee----ccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceE
Confidence 34443 68899987654 5544444443 1112211 1134566554 2467877764 5679999987765333
Q ss_pred EeeccCCCCcceEEEEEEeccce
Q 038188 338 LGRFSSGELGAAILIYCYKESLI 360 (384)
Q Consensus 338 v~~~~~~~~~~~~~~~~y~~sL~ 360 (384)
+-..+.. ..+.+.+|.++..
T Consensus 243 ~l~~~~~---~p~~i~v~~~~~q 262 (628)
T 4a0p_A 243 IIQGHLD---YVMDILVFHSSRQ 262 (628)
T ss_dssp EEECSCC---SCCEEEEECGGGS
T ss_pred EEecCCC---Ccceeeeeeeccc
Confidence 2222222 2334667776543
No 190
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=34.62 E-value=2.5e+02 Score=25.15 Aligned_cols=96 Identities=15% Similarity=0.303 Sum_probs=59.0
Q ss_pred CccEEEEEEcCCceee-eecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEE
Q 038188 233 HSKLILLFRISDEEFQ-EIQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFW 311 (384)
Q Consensus 233 ~~~~il~fD~~~~~~~-~i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 311 (384)
..+.|..+|+.+.+.. .+... ......+...|...+....+ ..+.+|-+.+.. +..... .......+.+.
T Consensus 330 ~dg~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~~~~l~s~s~d--g~v~vwd~~~~~--~~~~~~-~~~~~~~~~~~ 400 (464)
T 3v7d_B 330 MDTTIRIWDLENGELMYTLQGH----TALVGLLRLSDKFLVSAAAD--GSIRGWDANDYS--RKFSYH-HTNLSAITTFY 400 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCC----SSCEEEEEECSSEEEEEETT--SEEEEEETTTCC--EEEEEE-CTTCCCEEEEE
T ss_pred CCCcEEEEECCCCcEEEEEeCC----CCcEEEEEEcCCEEEEEeCC--CcEEEEECCCCc--eeeeec-CCCCccEEEEE
Confidence 3667888998766543 23322 12233344456665555555 789999988622 222221 12123445666
Q ss_pred eCCEEEEEEeCCeEEEEECCCCeEEE
Q 038188 312 KNNAVLMESINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 312 ~~~~il~~~~~~~l~~yd~~t~~~~~ 337 (384)
.++.+++...++.+.+||+++++...
T Consensus 401 ~~~~~l~~~~dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 401 VSDNILVSGSENQFNIYNLRSGKLVH 426 (464)
T ss_dssp ECSSEEEEEETTEEEEEETTTCCEEE
T ss_pred eCCCEEEEecCCeEEEEECCCCcEEe
Confidence 67777777778899999999998654
No 191
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=33.50 E-value=3.3e+02 Score=26.20 Aligned_cols=189 Identities=10% Similarity=0.032 Sum_probs=90.3
Q ss_pred CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCCC-cccc
Q 038188 119 GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSSTD-SWRV 197 (384)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t~-~W~~ 197 (384)
..++++|..|++...+...... . .....+.+.|. +.+-++.. . ... .....+.+++..++ ..+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~-----~--~~~~~~~~spd-g~~l~~~~-~-~~~-----~~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK-----E--KFLTNLSWSPD-ENILYVAE-V-NRA-----QNECKVNAYDAETGRFVRT 299 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT-----T--CEEEEEEECTT-SSEEEEEE-E-CTT-----SCEEEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceEeeccCCCC-----c--eeEeeEEEECC-CCEEEEEE-e-CCC-----CCeeEEEEEECCCCceeeE
Confidence 3689999999887665432111 0 12233444443 23322221 1 111 11457777888777 5554
Q ss_pred ccCCccccceeecCCcceEEE----CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCcee-EEEE-CCe-E
Q 038188 198 SKGNIKWIPYVFESYYNNANL----NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFES-LAPL-NGS-I 270 (384)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~v~~----~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~-l~~~-~G~-L 270 (384)
+... .... .......+.+ +|.+.+.... .....|..+|........+.... ..... +... +|+ |
T Consensus 300 ~~~~--~~~~-~~~~~~~~~~sp~~dg~~l~~~~~---~g~~~l~~~~~~~~~~~~l~~~~---~~v~~~~~~spdg~~l 370 (706)
T 2z3z_A 300 LFVE--TDKH-YVEPLHPLTFLPGSNNQFIWQSRR---DGWNHLYLYDTTGRLIRQVTKGE---WEVTNFAGFDPKGTRL 370 (706)
T ss_dssp EEEE--ECSS-CCCCCSCCEECTTCSSEEEEEECT---TSSCEEEEEETTSCEEEECCCSS---SCEEEEEEECTTSSEE
T ss_pred EEEc--cCCC-eECccCCceeecCCCCEEEEEEcc---CCccEEEEEECCCCEEEecCCCC---eEEEeeeEEcCCCCEE
Confidence 3211 0000 0000011222 7886666542 23567888887776666553221 11112 2333 454 5
Q ss_pred EEEEecCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCE-EEEEEeC----CeEEEEECCCCeE
Q 038188 271 ALLHLDESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNA-VLMESIN----GKLLLYDLVVQEM 335 (384)
Q Consensus 271 ~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~----~~l~~yd~~t~~~ 335 (384)
++...........||.++- .... .+..... ...+.+..+++ +++.... ..++.+|+++++.
T Consensus 371 ~~~~~~~~~~~~~l~~~d~~~~~~~---~l~~~~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 371 YFESTEASPLERHFYCIDIKGGKTK---DLTPESG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSH 438 (706)
T ss_dssp EEEESSSCTTCBEEEEEETTCCCCE---ESCCSSS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEE
T ss_pred EEEecCCCCceEEEEEEEcCCCCce---eccCCCc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeE
Confidence 5555444223577888764 3222 2222121 12344555554 4444332 4599999998873
No 192
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=33.31 E-value=2.3e+02 Score=24.22 Aligned_cols=97 Identities=13% Similarity=0.227 Sum_probs=54.5
Q ss_pred ccEEEEEEcCCceee-eecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEE
Q 038188 234 SKLILLFRISDEEFQ-EIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFW 311 (384)
Q Consensus 234 ~~~il~fD~~~~~~~-~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 311 (384)
.+.|..+|+.+.+.. .+.... ..-..+... +|++.+....+ ..+.||-+... .....+........-+.+.
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~---~~v~~l~~spd~~~l~s~s~d--g~i~iwd~~~~--~~~~~~~~h~~~v~~~~~s 257 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHA---MPIRSLTFSPDSQLLVTASDD--GYIKIYDVQHA--NLAGTLSGHASWVLNVAFC 257 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCS---SCCCEEEECTTSCEEEEECTT--SCEEEEETTTC--CEEEEECCCSSCEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEEcccC---CceeEEEEcCCCCEEEEEcCC--CeEEEEECCCc--ceeEEEcCCCCceEEEEEC
Confidence 567888898776543 232211 111233333 56655555544 78999988752 2333443333222334455
Q ss_pred eCCEEEEE-EeCCeEEEEECCCCeEEE
Q 038188 312 KNNAVLME-SINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 312 ~~~~il~~-~~~~~l~~yd~~t~~~~~ 337 (384)
+++..++. ..++.+.+||+++++...
T Consensus 258 p~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 258 PDDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 56655444 567789999999987543
No 193
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=32.82 E-value=2.4e+02 Score=24.42 Aligned_cols=91 Identities=11% Similarity=0.090 Sum_probs=46.9
Q ss_pred ccEEEEEEcCCceeee-ecCCCCCCCCceeEEE-ECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEE
Q 038188 234 SKLILLFRISDEEFQE-IQRPCIPYTPFESLAP-LNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFW 311 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~-i~~P~~~~~~~~~l~~-~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 311 (384)
.+.|-.+|+.+..-.. +...... .....+.. .+|.+.++...+ ..+.||-+.. ...+..+..+..-..-+.+.
T Consensus 261 D~~v~lwd~~~~~~~~~~~~~~~~-~~~~~~~~s~~g~~l~~g~~d--~~i~vwd~~~--~~~~~~l~~h~~~v~~l~~s 335 (354)
T 2pbi_B 261 DATCRLYDLRADREVAIYSKESII-FGASSVDFSLSGRLLFAGYND--YTINVWDVLK--GSRVSILFGHENRVSTLRVS 335 (354)
T ss_dssp TSCEEEEETTTTEEEEEECCTTCC-SCEEEEEECTTSSEEEEEETT--SCEEEEETTT--CSEEEEECCCSSCEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEEcCCCcc-cceeEEEEeCCCCEEEEEECC--CcEEEEECCC--CceEEEEECCCCcEEEEEEC
Confidence 5677888887654322 2221111 11122322 367766666655 7899998764 22334443333222334555
Q ss_pred eCCEEEEE-EeCCeEEEEE
Q 038188 312 KNNAVLME-SINGKLLLYD 329 (384)
Q Consensus 312 ~~~~il~~-~~~~~l~~yd 329 (384)
+++..++. ..++.+.+||
T Consensus 336 pdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 336 PDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTSSCEEEEETTSEEEEEC
T ss_pred CCCCEEEEEcCCCCEEecC
Confidence 56655444 4566666664
No 194
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=32.47 E-value=4.6e+02 Score=27.43 Aligned_cols=192 Identities=9% Similarity=0.116 Sum_probs=94.2
Q ss_pred cccceEEEee--CCeEEEEccCcccccc-cCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccE
Q 038188 108 PYDGIFCLCD--GGLITLWNPATKECRT-LPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAH 184 (384)
Q Consensus 108 s~~GLl~~~~--~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 184 (384)
+.+|-.++.. ++.+.|||..|++... +.... .....+.+.|. +.+-+..- . ...
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~----------~~v~~~~~s~~-~~~l~s~~-----~-------d~~ 680 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAHE----------DEVLCCAFSSD-DSYIATCS-----A-------DKK 680 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS----------SCEEEEEECTT-SSEEEEEE-----T-------TSE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCC----------CCEEEEEEecC-CCEEEEEe-----C-------CCe
Confidence 4455444433 4689999999987643 32111 12334555553 23332221 1 456
Q ss_pred EEEEEcCCCccccccCCccccceeecCCcceEEEC---ceEEEEEeecCCCCccEEEEEEcCCceeee-ecCCCCCCCCc
Q 038188 185 VAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLN---GVFYWFVSRAGDFHSKLILLFRISDEEFQE-IQRPCIPYTPF 260 (384)
Q Consensus 185 ~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~---G~lywl~~~~~~~~~~~il~fD~~~~~~~~-i~~P~~~~~~~ 260 (384)
+.+++..++.-...-... ..+. .++... ...+..+. ...+.|..+|+.+..... +.... ..-
T Consensus 681 v~vwd~~~~~~~~~~~~~-~~~v------~~~~~~~~~~~~~l~sg----~~d~~v~vwd~~~~~~~~~~~~h~---~~v 746 (1249)
T 3sfz_A 681 VKIWDSATGKLVHTYDEH-SEQV------NCCHFTNKSNHLLLATG----SNDFFLKLWDLNQKECRNTMFGHT---NSV 746 (1249)
T ss_dssp EEEEETTTCCEEEEEECC-SSCE------EEEEECSSSSCCEEEEE----ETTSCEEEEETTSSSEEEEECCCS---SCE
T ss_pred EEEEECCCCceEEEEcCC-CCcE------EEEEEecCCCceEEEEE----eCCCeEEEEECCCcchhheecCCC---CCE
Confidence 888888876432110000 0000 112221 11222222 235678888887765433 22111 111
Q ss_pred eeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCC--------C---CccccceEEEeCCEEEEEEeCCeEEEE
Q 038188 261 ESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGP--------F---LGVKSPCGFWKNNAVLMESINGKLLLY 328 (384)
Q Consensus 261 ~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~--------~---~~~~~~~~~~~~~~il~~~~~~~l~~y 328 (384)
..+... +|.+.+....+ ..+.+|-+....-........ . ......+.+..++..++...++.+..|
T Consensus 747 ~~~~~sp~~~~l~s~s~d--g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~ 824 (1249)
T 3sfz_A 747 NHCRFSPDDELLASCSAD--GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLF 824 (1249)
T ss_dssp EEEEECSSTTEEEEEESS--SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEE
T ss_pred EEEEEecCCCEEEEEECC--CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEE
Confidence 223322 56665555555 789999987622222111110 0 001223344557777666667889999
Q ss_pred ECCCCeEEEE
Q 038188 329 DLVVQEMRDL 338 (384)
Q Consensus 329 d~~t~~~~~v 338 (384)
|..++.....
T Consensus 825 d~~~~~~~~~ 834 (1249)
T 3sfz_A 825 DIHTSGLLAE 834 (1249)
T ss_dssp ETTTCCEEEE
T ss_pred EecCCCceeE
Confidence 9999876543
No 195
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=31.85 E-value=1e+02 Score=27.50 Aligned_cols=31 Identities=10% Similarity=0.061 Sum_probs=24.6
Q ss_pred eCCEEEEEEeCCeEEEEECCCCeEEEEeecc
Q 038188 312 KNNAVLMESINGKLLLYDLVVQEMRDLGRFS 342 (384)
Q Consensus 312 ~~~~il~~~~~~~l~~yd~~t~~~~~v~~~~ 342 (384)
.++.|++...+++++..|++|++...-...+
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 4677888888889999999999877655433
No 196
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=31.59 E-value=2.7e+02 Score=24.46 Aligned_cols=96 Identities=14% Similarity=0.097 Sum_probs=51.4
Q ss_pred CccEEEEEEcCCcee--eeecCCCCCCCCceeEEEECCeEEEEEecCCCCeEEEEEEcC-CceeEEEE------eCCCCc
Q 038188 233 HSKLILLFRISDEEF--QEIQRPCIPYTPFESLAPLNGSIALLHLDESNQYIEIWVMNE-MNWIQQFA------IGPFLG 303 (384)
Q Consensus 233 ~~~~il~fD~~~~~~--~~i~~P~~~~~~~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~------i~~~~~ 303 (384)
..+.|..+|+.+..- ..+.... ...-..+...+|++.+....+ ..+.+|-+.+ ..-..... +.....
T Consensus 311 ~dg~i~vwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~l~s~~~d--~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (420)
T 3vl1_A 311 ENGMLAQWDLRSPECPVGEFLINE--GTPINNVYFAAGALFVSSGFD--TSIKLDIISDPESERPAIEFETPTFLVSNDD 386 (420)
T ss_dssp TTSEEEEEETTCTTSCSEEEEEST--TSCEEEEEEETTEEEEEETTT--EEEEEEEECCTTCCSCEECTTSCEEECCSSC
T ss_pred CCCeEEEEEcCCCcCchhhhhccC--CCCceEEEeCCCCEEEEecCC--ccEEEEeccCCCCCccceeccCccEEccCCc
Confidence 367888999976532 2232211 122223444577755555444 8999999976 11111111 111111
Q ss_pred cccceEEEeCC----EEEEEEeCCeEEEEECCC
Q 038188 304 VKSPCGFWKNN----AVLMESINGKLLLYDLVV 332 (384)
Q Consensus 304 ~~~~~~~~~~~----~il~~~~~~~l~~yd~~t 332 (384)
...-+.+..++ .++.....+.+..|+++.
T Consensus 387 ~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 387 AVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 12234444444 477777778889999875
No 197
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=31.31 E-value=2.6e+02 Score=24.25 Aligned_cols=69 Identities=12% Similarity=0.190 Sum_probs=37.3
Q ss_pred eEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCC---C---CccccceEEEeCCEE-EEEEeC---CeEEEEEC
Q 038188 262 SLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGP---F---LGVKSPCGFWKNNAV-LMESIN---GKLLLYDL 330 (384)
Q Consensus 262 ~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~---~---~~~~~~~~~~~~~~i-l~~~~~---~~l~~yd~ 330 (384)
.+... +| +.++...+ ..+.+|-+.... .+..+.. . ..-..-+.+..++.+ +....+ +.+.+||+
T Consensus 191 ~~~~~~~~-~l~~~~~d--g~i~i~d~~~~~--~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 191 SVDISERG-LIATGFNN--GTVQISELSTLR--PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp EEEECTTS-EEEEECTT--SEEEEEETTTTE--EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEET
T ss_pred EEEECCCc-eEEEEeCC--CcEEEEECCCCc--eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 34433 45 33334333 789999887532 2233322 2 212233444445554 444556 78999999
Q ss_pred CCCeE
Q 038188 331 VVQEM 335 (384)
Q Consensus 331 ~t~~~ 335 (384)
++++.
T Consensus 266 ~~~~~ 270 (397)
T 1sq9_A 266 EFGER 270 (397)
T ss_dssp TTCCE
T ss_pred CCCcc
Confidence 88764
No 198
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=31.09 E-value=59 Score=24.32 Aligned_cols=44 Identities=0% Similarity=-0.132 Sum_probs=25.7
Q ss_pred CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEee---eCCCCCEEEEEEE
Q 038188 118 GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGL---CDASGDYKVVFIC 169 (384)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~---d~~~~~ykvv~~~ 169 (384)
.-.+++.||.|++|...-..... ...+.+.+ |...+.|+|+...
T Consensus 19 ~A~Vm~~D~~~~~W~p~~~g~ls--------~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 19 KAVVMTRDDSSGGWFPQEGGGIS--------RVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEEEECTTSSSSEECSCCSCE--------EEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EEEEeeEcCCCCCEeeCCCCCcc--------cEEEEEecCCCCCCCCEEEEEEEE
Confidence 34678899999988654332110 12222333 4556789988774
No 199
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=30.61 E-value=99 Score=22.83 Aligned_cols=39 Identities=10% Similarity=0.132 Sum_probs=27.3
Q ss_pred CeEEEEccCcc-cccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEE
Q 038188 119 GLITLWNPATK-ECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFI 168 (384)
Q Consensus 119 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~ 168 (384)
-.+++.||.|+ +|...-.. .....+-+|+..+.|+|+.+
T Consensus 11 A~V~~~D~~tk~~W~p~g~~-----------~~~V~~~~d~~~~~yRIv~~ 50 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKH-----------AVTVSYFYDSTRNVYRIISL 50 (120)
T ss_dssp EEEEEECTTTSCSEEESCSS-----------CEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCC-----------ceEEEEEEcCCCCEEEEEEc
Confidence 46789999996 99653321 13445677888888999875
No 200
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=29.13 E-value=4.3e+02 Score=26.07 Aligned_cols=202 Identities=12% Similarity=0.049 Sum_probs=97.4
Q ss_pred cceEEEee-CCeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEE
Q 038188 110 DGIFCLCD-GGLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVY 188 (384)
Q Consensus 110 ~GLl~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 188 (384)
+|-|-+.. .+.++.++|.++.+......+.......-.......+..|... . +.+.. ....+..|
T Consensus 323 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~---lWigt----------~~~Gl~~~ 388 (781)
T 3v9f_A 323 FNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG-K---LWIGT----------DGGGINVF 388 (781)
T ss_dssp SCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS-C---EEEEE----------BSSCEEEE
T ss_pred CCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC-C---EEEEe----------CCCcEEEE
Confidence 44444444 5678889999888777653211000000000123334444322 1 11111 02345566
Q ss_pred EcCCCccccccCCccccceeecCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE
Q 038188 189 TSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL 266 (384)
Q Consensus 189 ss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~ 266 (384)
+..++.++..... ..++. ..-.+++. +|.+ |+.. ....|..||..+.+++.+..+......-..+.+.
T Consensus 389 ~~~~~~~~~~~~~-~~~~~---~~v~~i~~d~~g~l-Wigt-----~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d 458 (781)
T 3v9f_A 389 ENGKRVAIYNKEN-RELLS---NSVLCSLKDSEGNL-WFGT-----YLGNISYYNTRLKKFQIIELEKNELLDVRVFYED 458 (781)
T ss_dssp ETTEEEEECC------CCC---SBEEEEEECTTSCE-EEEE-----TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEEC
T ss_pred ECCCCeEEEccCC-CCCCC---cceEEEEECCCCCE-EEEe-----ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEEC
Confidence 6666655433110 01110 01123333 4554 5553 2468999999999998875441111222344444
Q ss_pred -CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCC---CccccceEEEeCCEEEEEEeCCeEEEEECCCCeEEEEe
Q 038188 267 -NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPF---LGVKSPCGFWKNNAVLMESINGKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 267 -~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~---~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~~~~v~ 339 (384)
+|.|.+... ..+.++-.+...|......... ......+....++.|.+.+..+.++.||+++++++.+.
T Consensus 459 ~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 459 KNKKIWIGTH----AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp TTSEEEEEET----TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEEC
T ss_pred CCCCEEEEEC----CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEcc
Confidence 567766543 2333333233566654432211 11112223334678877776445999999999888765
No 201
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=29.07 E-value=4e+02 Score=25.71 Aligned_cols=66 Identities=15% Similarity=0.193 Sum_probs=39.2
Q ss_pred eEEEEEecCCCCeEEEEEEcC--CceeE-EEEeCCCCccccceEEEeCCEEEEE-EeCCeEEEEECCCCeEE
Q 038188 269 SIALLHLDESNQYIEIWVMNE--MNWIQ-QFAIGPFLGVKSPCGFWKNNAVLME-SINGKLLLYDLVVQEMR 336 (384)
Q Consensus 269 ~L~l~~~~~~~~~l~iW~l~~--~~W~~-~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~t~~~~ 336 (384)
.+.+....+ ..+.||-+.. ..+.. ..++..+.....-+.+..++..++. ..++.+.+||+.+++..
T Consensus 396 ~~l~s~s~D--~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 396 DIIVSASRD--KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVST 465 (694)
T ss_dssp SEEEEEETT--SEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CEEEEEeCC--CcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcce
Confidence 344444445 8999999875 23322 2333333322334555566666555 55788999999988643
No 202
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=28.98 E-value=1.4e+02 Score=26.27 Aligned_cols=98 Identities=17% Similarity=0.197 Sum_probs=52.9
Q ss_pred ccEEEEEEcCCceee-eecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcC--CceeEEEEeCCCCccccceE
Q 038188 234 SKLILLFRISDEEFQ-EIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCG 309 (384)
Q Consensus 234 ~~~il~fD~~~~~~~-~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~ 309 (384)
.+.|..+|+.+.... .+..... ...-..+... +|++.+....+ ..+.||-++. ........+..+..-..-+.
T Consensus 44 d~~v~iw~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d--g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~ 120 (416)
T 2pm9_A 44 DSSLELWSLLAADSEKPIASLQV-DSKFNDLDWSHNNKIIAGALDN--GSLELYSTNEANNAINSMARFSNHSSSVKTVK 120 (416)
T ss_dssp CCCCEEEESSSGGGCSCSCCCCC-SSCEEEEEECSSSSCEEEEESS--SCEEEECCSSTTSCCCEEEECCCSSSCCCEEE
T ss_pred CCeEEEEEccCCCCCcEEEEEec-CCceEEEEECCCCCeEEEEccC--CeEEEeecccccccccchhhccCCccceEEEE
Confidence 456777888765432 1111111 1122233332 55555555444 7899999876 23445555544332233344
Q ss_pred EEeC-CEEEE-EEeCCeEEEEECCCCe
Q 038188 310 FWKN-NAVLM-ESINGKLLLYDLVVQE 334 (384)
Q Consensus 310 ~~~~-~~il~-~~~~~~l~~yd~~t~~ 334 (384)
+.++ +.+++ ...++.+.+||+++++
T Consensus 121 ~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 121 FNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp ECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred EcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 5544 44444 4557789999999875
No 203
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=28.43 E-value=4.1e+02 Score=25.69 Aligned_cols=143 Identities=10% Similarity=0.072 Sum_probs=75.4
Q ss_pred cEEEEEEcCCCccccccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCce---eeeecCCCCCCCC
Q 038188 183 AHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEE---FQEIQRPCIPYTP 259 (384)
Q Consensus 183 ~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~---~~~i~~P~~~~~~ 259 (384)
..+.+.+..++.|+.+..... .....+..+|.+|..+.. ......|+.+|+++.. |+.+-.+... ..
T Consensus 252 ~~l~~~~~~~~~~~~l~~~~~-------~~~~~~~~~g~l~~~s~~--~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~ 321 (695)
T 2bkl_A 252 NDVYWKRPGEKDFRLLVKGVG-------AKYEVHAWKDRFYVLTDE--GAPRQRVFEVDPAKPARASWKEIVPEDSS-AS 321 (695)
T ss_dssp EEEEEECTTCSSCEEEEECSS-------CCEEEEEETTEEEEEECT--TCTTCEEEEEBTTBCSGGGCEEEECCCSS-CE
T ss_pred eEEEEEcCCCCceEEeecCCC-------ceEEEEecCCcEEEEECC--CCCCCEEEEEeCCCCCccCCeEEecCCCC-Ce
Confidence 455555655667776542210 111234456776555432 1236789999997654 6655332211 11
Q ss_pred ceeEEEECCeEEEEEecCCCCeEEEEEEcC-CceeEEEEeCCC-CccccceEEEeC-CEEEEEEe----CCeEEEEECCC
Q 038188 260 FESLAPLNGSIALLHLDESNQYIEIWVMNE-MNWIQQFAIGPF-LGVKSPCGFWKN-NAVLMESI----NGKLLLYDLVV 332 (384)
Q Consensus 260 ~~~l~~~~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~-~~~~~~~~~~~~-~~il~~~~----~~~l~~yd~~t 332 (384)
-..+...+|.|.+....+ ....||+++- .. ....+... ......+.+..+ +.+++... ...++.||+++
T Consensus 322 l~~~~~~~~~lv~~~~~d--g~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 322 LLSVSIVGGHLSLEYLKD--ATSEVRVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp EEEEEEETTEEEEEEEET--TEEEEEEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEEECCEEEEEEEEC--CEEEEEEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 122344588887777665 6778888873 22 23334311 111112222233 45655432 34699999999
Q ss_pred CeEEEEe
Q 038188 333 QEMRDLG 339 (384)
Q Consensus 333 ~~~~~v~ 339 (384)
++.+.+.
T Consensus 398 g~~~~l~ 404 (695)
T 2bkl_A 398 GKSELWA 404 (695)
T ss_dssp CCEEEEE
T ss_pred CcEEEEe
Confidence 8876654
No 204
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=27.72 E-value=2.7e+02 Score=23.34 Aligned_cols=94 Identities=11% Similarity=0.034 Sum_probs=51.5
Q ss_pred ccEEEEEEcCCcee-eeecCCCCCCCCceeEEE-ECCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEE
Q 038188 234 SKLILLFRISDEEF-QEIQRPCIPYTPFESLAP-LNGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFW 311 (384)
Q Consensus 234 ~~~il~fD~~~~~~-~~i~~P~~~~~~~~~l~~-~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 311 (384)
.+.|..+|+.+... ..+..... .-..+.. .+|++.+....+ ..+.||-++.. ..+..+..+.....-+.+.
T Consensus 34 dg~v~lWd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~s~d--~~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~ 106 (304)
T 2ynn_A 34 SGRVELWNYETQVEVRSIQVTET---PVRAGKFIARKNWIIVGSDD--FRIRVFNYNTG--EKVVDFEAHPDYIRSIAVH 106 (304)
T ss_dssp TSEEEEEETTTTEEEEEEECCSS---CEEEEEEEGGGTEEEEEETT--SEEEEEETTTC--CEEEEEECCSSCEEEEEEC
T ss_pred CCcEEEEECCCCceeEEeeccCC---cEEEEEEeCCCCEEEEECCC--CEEEEEECCCC--cEEEEEeCCCCcEEEEEEc
Confidence 56677777766543 22332211 1112222 256665555555 89999988752 2333333333223345555
Q ss_pred eCCEEEEE-EeCCeEEEEECCCCe
Q 038188 312 KNNAVLME-SINGKLLLYDLVVQE 334 (384)
Q Consensus 312 ~~~~il~~-~~~~~l~~yd~~t~~ 334 (384)
+++..++. ..++.+.+||++++.
T Consensus 107 ~~~~~l~sgs~D~~v~lWd~~~~~ 130 (304)
T 2ynn_A 107 PTKPYVLSGSDDLTVKLWNWENNW 130 (304)
T ss_dssp SSSSEEEEEETTSCEEEEEGGGTT
T ss_pred CCCCEEEEECCCCeEEEEECCCCc
Confidence 56655444 557779999998863
No 205
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=27.59 E-value=2.6e+02 Score=23.13 Aligned_cols=58 Identities=14% Similarity=0.178 Sum_probs=35.7
Q ss_pred CeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEEEEE-EeCCeEEEEECCCCeEEE
Q 038188 280 QYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAVLME-SINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 280 ~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~ 337 (384)
..+.||-++...-.+............-+.+.+++..++. ..++.+.+||.++++...
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence 6899998776444444443222212233455556665554 567889999999987543
No 206
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=27.31 E-value=5.5e+02 Score=26.77 Aligned_cols=102 Identities=13% Similarity=0.166 Sum_probs=53.9
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeee-cCCCCCCCCceeEEE-ECCeEEEEEecCCCCeEEEEEEcCCceeEEE
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEI-QRPCIPYTPFESLAP-LNGSIALLHLDESNQYIEIWVMNEMNWIQQF 296 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~~~~~~l~~-~~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~ 296 (384)
+|....... .+.+..+|+.+...... ..... ..-..+.. -+|.+.++...+ ..+.+|-++. ...+.
T Consensus 809 dg~~l~~~~------~~~v~~~d~~~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~~~~d--g~v~vwd~~~--~~~~~ 876 (1249)
T 3sfz_A 809 DGDKIIVAA------KNKVLLFDIHTSGLLAEIHTGHH--STIQYCDFSPYDHLAVIALSQ--YCVELWNIDS--RLKVA 876 (1249)
T ss_dssp TSSEEEEEE------TTEEEEEETTTCCEEEEEECSSS--SCCCEEEECSSTTEEEEECSS--SCEEEEETTT--TEEEE
T ss_pred CCCEEEEEc------CCcEEEEEecCCCceeEEcCCCC--CceEEEEEcCCCCEEEEEeCC--CeEEEEEcCC--Cceee
Confidence 455444443 56788888877665432 22211 11122222 356666655554 7899998875 23334
Q ss_pred EeCCCCccccceEEEeCCEE-EEEEeCCeEEEEECCC
Q 038188 297 AIGPFLGVKSPCGFWKNNAV-LMESINGKLLLYDLVV 332 (384)
Q Consensus 297 ~i~~~~~~~~~~~~~~~~~i-l~~~~~~~l~~yd~~t 332 (384)
.+.........+.+.+++.. +....++.+.+||+.+
T Consensus 877 ~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 877 DCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred ecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 44333322233444445544 4445567788888653
No 207
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=27.25 E-value=2.8e+02 Score=23.32 Aligned_cols=72 Identities=14% Similarity=0.236 Sum_probs=42.1
Q ss_pred CCeEEEEEecCCCCeEEEEEEcC-CceeEEEEeCCCCccccceEEEeCCE--EEEEEeCCeEEEEEC-CCCeEEEEee
Q 038188 267 NGSIALLHLDESNQYIEIWVMNE-MNWIQQFAIGPFLGVKSPCGFWKNNA--VLMESINGKLLLYDL-VVQEMRDLGR 340 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~--il~~~~~~~l~~yd~-~t~~~~~v~~ 340 (384)
+|.+.++...+ ..+.||-++. ........+.....-..-+.+.+++. ++....++.+.+||+ ++++...+..
T Consensus 22 ~~~~l~~~~~d--~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 22 SKSLLLITSWD--GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp GGTEEEEEETT--SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS
T ss_pred CCCEEEEEcCC--CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccc
Confidence 55555555544 7899999987 32222222222221223344555655 455566788999999 9888765543
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=27.23 E-value=3.6e+02 Score=24.64 Aligned_cols=103 Identities=15% Similarity=0.002 Sum_probs=58.0
Q ss_pred ccEEEEEEcCCceeeeecC-CCC--C-------CCCceeEEE--ECCeEEEEEecCC-----CCeEEEEEEcCCceeEEE
Q 038188 234 SKLILLFRISDEEFQEIQR-PCI--P-------YTPFESLAP--LNGSIALLHLDES-----NQYIEIWVMNEMNWIQQF 296 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i~~-P~~--~-------~~~~~~l~~--~~G~L~l~~~~~~-----~~~l~iW~l~~~~W~~~~ 296 (384)
.+.+..+|..++....+.. +.. . -.....++. -+++||+...... ...=+||+++-.++..+.
T Consensus 285 ~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~ 364 (426)
T 3c75_H 285 TGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERIN 364 (426)
T ss_dssp TSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE
T ss_pred CCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEE
Confidence 4578889987665443321 100 0 001111232 2467888754211 124579999887788888
Q ss_pred EeCCCCccccceEEEeCCE-EEEE-E-eCCeEEEEECCCCeEEE
Q 038188 297 AIGPFLGVKSPCGFWKNNA-VLME-S-INGKLLLYDLVVQEMRD 337 (384)
Q Consensus 297 ~i~~~~~~~~~~~~~~~~~-il~~-~-~~~~l~~yd~~t~~~~~ 337 (384)
+|.... ...-+.+..+++ .++. . .++.+.+||..|.+...
T Consensus 365 ~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 365 KIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp EEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEE
Confidence 774211 223345566665 5444 4 36789999999988643
No 209
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=27.15 E-value=2.9e+02 Score=23.42 Aligned_cols=65 Identities=22% Similarity=0.149 Sum_probs=36.8
Q ss_pred CeEEEEEecCCCCeEEEEEEcC-C-----------ceeEEEEeCCCCccccceEEEeC--CEEEE-EEeCCeEEEEECCC
Q 038188 268 GSIALLHLDESNQYIEIWVMNE-M-----------NWIQQFAIGPFLGVKSPCGFWKN--NAVLM-ESINGKLLLYDLVV 332 (384)
Q Consensus 268 G~L~l~~~~~~~~~l~iW~l~~-~-----------~W~~~~~i~~~~~~~~~~~~~~~--~~il~-~~~~~~l~~yd~~t 332 (384)
|.+.+....+ ..+.+|-+.. . ....+..+.....-..-+.+..+ +.+++ ...++.+.+||+++
T Consensus 241 ~~~l~~~~~d--~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 241 GDLILSKSCE--NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp TTEEEEECSS--SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred CCEEEEEecC--CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence 6655544444 8999999876 1 12223333222211223444445 66555 45577899999998
Q ss_pred Ce
Q 038188 333 QE 334 (384)
Q Consensus 333 ~~ 334 (384)
++
T Consensus 319 ~~ 320 (366)
T 3k26_A 319 ED 320 (366)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 210
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=26.88 E-value=3.8e+02 Score=24.76 Aligned_cols=99 Identities=12% Similarity=0.126 Sum_probs=55.1
Q ss_pred ccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEe
Q 038188 234 SKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWK 312 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 312 (384)
.+.|..+|...+....+.... ..-..+... +|++.+....+ ..+.+|-++.. .+..+.....-..-+.+.+
T Consensus 406 d~~v~~~~~~~~~~~~~~~~~---~~v~~~~~s~d~~~l~~~~~d--~~v~~w~~~~~---~~~~~~~~~~~v~~~~~sp 477 (577)
T 2ymu_A 406 DKTVKLWNRNGQLLQTLTGHS---SSVWGVAFSPDDQTIASASDD--KTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSP 477 (577)
T ss_dssp TSEEEEECTTCCEEEEEECCS---SCEEEEEECTTSSEEEEEETT--SEEEEEETTSC---EEEEEECCSSCEEEEEECT
T ss_pred CCEEEEEeCCCCEEEEecCCC---CCeEEEEECCCCCEEEEEcCC--CEEEEEECCCC---EEEEEcCCCCCEEEEEEcC
Confidence 456777776665555443321 112233333 56655555554 78999986532 2233333332223455666
Q ss_pred CCEEEEE-EeCCeEEEEECCCCeEEEEee
Q 038188 313 NNAVLME-SINGKLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 313 ~~~il~~-~~~~~l~~yd~~t~~~~~v~~ 340 (384)
++.+++. ..++.+.+||...+.++.+..
T Consensus 478 d~~~las~~~d~~i~iw~~~~~~~~~~~~ 506 (577)
T 2ymu_A 478 DGQTIASASDDKTVKLWNRNGQLLQTLTG 506 (577)
T ss_dssp TSCEEEEEETTSEEEEEETTSCEEEEEEC
T ss_pred CCCEEEEEeCCCEEEEEcCCCCEEEEEeC
Confidence 7666555 556789999987776666543
No 211
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=26.52 E-value=2.6e+02 Score=22.65 Aligned_cols=183 Identities=10% Similarity=0.063 Sum_probs=89.5
Q ss_pred CeEEEEccCcccccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEEEEEecccccccccccEEEEEEcCC-Ccccc
Q 038188 119 GLITLWNPATKECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFICKLWNEKIQDAYEHAHVAVYTSST-DSWRV 197 (384)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~t-~~W~~ 197 (384)
..++++|+.+++...+.... .....+.+.|.. .+-++. . ...+.+++..+ +....
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~----------~~v~~~~~spdg-~~l~~~--~-----------~~~i~~~d~~~~~~~~~ 77 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTP----------ELFEAPNWSPDG-KYLLLN--S-----------EGLLYRLSLAGDPSPEK 77 (297)
T ss_dssp EEEEEEETTTTEEEEEEEES----------SCCEEEEECTTS-SEEEEE--E-----------TTEEEEEESSSCCSCEE
T ss_pred eeEEEEeCCCCceeeeccCC----------cceEeeEECCCC-CEEEEE--c-----------CCeEEEEeCCCCCCceE
Confidence 46899999998877654322 122334455532 333321 1 34688888888 66554
Q ss_pred ccCCccccceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCe-EEEEEe
Q 038188 198 SKGNIKWIPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGS-IALLHL 275 (384)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~-L~l~~~ 275 (384)
+........ .......-+|......... ......|..+|+.+.....+.... ....+... +|+ |++...
T Consensus 78 ~~~~~~~~~----~~~~~~spdg~~l~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~spdg~~l~~~~~ 148 (297)
T 2ojh_A 78 VDTGFATIC----NNDHGISPDGALYAISDKV-EFGKSAIYLLPSTGGTPRLMTKNL----PSYWHGWSPDGKSFTYCGI 148 (297)
T ss_dssp CCCTTCCCB----CSCCEECTTSSEEEEEECT-TTSSCEEEEEETTCCCCEECCSSS----SEEEEEECTTSSEEEEEEE
T ss_pred ecccccccc----ccceEECCCCCEEEEEEeC-CCCcceEEEEECCCCceEEeecCC----CccceEECCCCCEEEEEEC
Confidence 432110000 0001122255533333211 123678888888776655443322 11222332 565 443444
Q ss_pred cCCCCeEEEEEEcC--CceeEEEEeCCCCccccceEEEeCCE-EEEEEe---CCeEEEEECCCCeEEEEe
Q 038188 276 DESNQYIEIWVMNE--MNWIQQFAIGPFLGVKSPCGFWKNNA-VLMESI---NGKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 276 ~~~~~~l~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~---~~~l~~yd~~t~~~~~v~ 339 (384)
.+ ..+.||.++. ... ..+.........+.+..++. +++... ...++.+++.+++.+.+.
T Consensus 149 ~~--~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 149 RD--QVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp ET--TEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred CC--CceEEEEEECCCCcc---eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 44 6789999864 222 12222221122334444554 444432 235777777777766543
No 212
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=26.20 E-value=4.3e+02 Score=25.13 Aligned_cols=112 Identities=13% Similarity=0.032 Sum_probs=61.5
Q ss_pred CceEEEEEeecCCCCccEEEEEEcCCceeeee-cCCCCCC-----CCceeEEEE-CCeEEEEEecCCCCeEEEEEEcC--
Q 038188 219 NGVFYWFVSRAGDFHSKLILLFRISDEEFQEI-QRPCIPY-----TPFESLAPL-NGSIALLHLDESNQYIEIWVMNE-- 289 (384)
Q Consensus 219 ~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i-~~P~~~~-----~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~-- 289 (384)
+|.+|+.... .....|..+|+++.++..+ ....... .....+... +|++++.... ....||.++-
T Consensus 252 dg~l~~~~~~---~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~d~~~ 325 (662)
T 3azo_A 252 DGSLIVATDR---TGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK---GAAVLGILDPES 325 (662)
T ss_dssp TSCEEEEECT---TSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS---SSCEEEEEETTT
T ss_pred CCeEEEEECC---CCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc---CccEEEEEECCC
Confidence 7888877642 2234899999977776654 2221110 001234444 6776665443 6778998874
Q ss_pred CceeEEEEeCCCCccccceEEEeCCEEEEEE-eC---CeEEEEECCCCeEEEEe
Q 038188 290 MNWIQQFAIGPFLGVKSPCGFWKNNAVLMES-IN---GKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 290 ~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~-~~---~~l~~yd~~t~~~~~v~ 339 (384)
.. ..++.........+....++.+++.. .. ..++.+|+++++.+.+.
T Consensus 326 ~~---~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 326 GE---LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp TE---EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred Cc---EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence 33 23343222122233112355665553 32 25888999999887774
No 213
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=25.73 E-value=3.3e+02 Score=23.58 Aligned_cols=95 Identities=12% Similarity=0.111 Sum_probs=50.4
Q ss_pred ccEEEEEEcCCceee-eecCCCCCCCCceeEEE--E-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceE
Q 038188 234 SKLILLFRISDEEFQ-EIQRPCIPYTPFESLAP--L-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCG 309 (384)
Q Consensus 234 ~~~il~fD~~~~~~~-~i~~P~~~~~~~~~l~~--~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~ 309 (384)
.+.|..+|+.+.+.. .+.... ..-..+.. . +|.+.+....+ ..+.+|-+....- +..+..+..-...+.
T Consensus 175 D~~v~lwd~~~~~~~~~~~~h~---~~v~~~~~~~~~~g~~l~sgs~D--g~v~~wd~~~~~~--~~~~~~h~~~v~~v~ 247 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSFHGHG---ADVLCLDLAPSETGNTFVSGGCD--KKAMVWDMRSGQC--VQAFETHESDVNSVR 247 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECCS---SCEEEEEECCCSSCCEEEEEETT--SCEEEEETTTCCE--EEEECCCSSCEEEEE
T ss_pred CCcEEEEeCCCCeEEEEEcCCC---CCeEEEEEEeCCCCCEEEEEeCC--CeEEEEECCCCcE--EEEecCCCCCeEEEE
Confidence 567778888766542 222211 11111211 1 35555555555 7899998876332 223332222223344
Q ss_pred EEeCCEEEE-EEeCCeEEEEECCCCeE
Q 038188 310 FWKNNAVLM-ESINGKLLLYDLVVQEM 335 (384)
Q Consensus 310 ~~~~~~il~-~~~~~~l~~yd~~t~~~ 335 (384)
+.+++..++ ...++.+.+||+++++.
T Consensus 248 ~~p~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 248 YYPSGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 555555444 45677899999988754
No 214
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=25.49 E-value=3.1e+02 Score=24.25 Aligned_cols=100 Identities=15% Similarity=0.145 Sum_probs=53.4
Q ss_pred CccEEEEEEcCCcee-eeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeC-CCCccccceE
Q 038188 233 HSKLILLFRISDEEF-QEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIG-PFLGVKSPCG 309 (384)
Q Consensus 233 ~~~~il~fD~~~~~~-~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~-~~~~~~~~~~ 309 (384)
..+.|..+|+.+.+. ..+..|... ..-..+... +|.+.+....+ ..+.||-+... ..+..+. ....-..-+.
T Consensus 190 ~d~~i~iwd~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~~~d--g~i~iwd~~~~--~~~~~~~~~~~~~v~~~~ 264 (437)
T 3gre_A 190 NLSRVIIFDIRTLERLQIIENSPRH-GAVSSICIDEECCVLILGTTR--GIIDIWDIRFN--VLIRSWSFGDHAPITHVE 264 (437)
T ss_dssp TTSEEEEEETTTCCEEEEEECCGGG-CCEEEEEECTTSCEEEEEETT--SCEEEEETTTT--EEEEEEBCTTCEEEEEEE
T ss_pred CCCeEEEEeCCCCeeeEEEccCCCC-CceEEEEECCCCCEEEEEcCC--CeEEEEEcCCc--cEEEEEecCCCCceEEEE
Confidence 367889999976554 334443221 122233332 56666656555 78999988752 2233332 1110011111
Q ss_pred ----EEeCCEEEEE-EeCCeEEEEECCCCeEEE
Q 038188 310 ----FWKNNAVLME-SINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 310 ----~~~~~~il~~-~~~~~l~~yd~~t~~~~~ 337 (384)
+..++.+++. ..++.+.+||+++++...
T Consensus 265 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 297 (437)
T 3gre_A 265 VCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQY 297 (437)
T ss_dssp ECTTTCTTEEEEEEESTTEEEEEEETTTTEEEE
T ss_pred eccccCCCccEEEEEcCCCcEEEEEcCCCcEEE
Confidence 1134555555 446679999999887543
No 215
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=25.46 E-value=3e+02 Score=23.08 Aligned_cols=18 Identities=17% Similarity=0.305 Sum_probs=8.1
Q ss_pred cceEEEee-CCeEEEEccC
Q 038188 110 DGIFCLCD-GGLITLWNPA 127 (384)
Q Consensus 110 ~GLl~~~~-~~~~~V~NP~ 127 (384)
+|.|.+.. .+.++.+|+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~ 125 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD 125 (330)
T ss_dssp TTEEEEECTTSEEEEECTT
T ss_pred CCEEEEEecCCEEEEEcCC
Confidence 44444333 3345555554
No 216
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=25.06 E-value=2.9e+02 Score=24.26 Aligned_cols=66 Identities=11% Similarity=0.198 Sum_probs=38.0
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCE-EEEEEeCCeEEEEECCCCeEE
Q 038188 267 NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNA-VLMESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~~~l~~yd~~t~~~~ 336 (384)
+|++.+....+ ..+.||-++.. ..+..+..+..-..-+.+..++. ++....++.+.+||+++++..
T Consensus 134 dg~~l~s~~~d--~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 134 DGKFLATGAED--RLIRIWDIENR--KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp TSSEEEEEETT--SCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCEEEEEcCC--CeEEEEECCCC--cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE
Confidence 55555555544 78899987652 22333333322222344444554 444466788999999988754
No 217
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=24.86 E-value=3.5e+02 Score=23.59 Aligned_cols=66 Identities=14% Similarity=0.133 Sum_probs=39.5
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEEEEEEeCCeEEEEECCCCeE
Q 038188 267 NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAVLMESINGKLLLYDLVVQEM 335 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~~ 335 (384)
+|++.++........+.||-++.. ..+..+.... -..-+.+.++++++....++.+..++..+++.
T Consensus 144 Dg~~la~as~~~d~~i~iwd~~~~--~~~~~~~~~~-~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 144 EGTVAAIASSKVPAIMRIIDPSDL--TEKFEIETRG-EVKDLHFSTDGKVVAYITGSSLEVISTVTGSC 209 (365)
T ss_dssp TSSCEEEEESCSSCEEEEEETTTT--EEEEEEECSS-CCCEEEECTTSSEEEEECSSCEEEEETTTCCE
T ss_pred CCCEEEEEECCCCCEEEEeECCCC--cEEEEeCCCC-ceEEEEEccCCceEEeccceeEEEEEeccCcc
Confidence 677655544333478999988752 2334443222 22345666777777766666677777777654
No 218
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=23.89 E-value=67 Score=16.64 Aligned_cols=17 Identities=24% Similarity=0.288 Sum_probs=13.1
Q ss_pred EEeCCeEEEEECCCCeE
Q 038188 319 ESINGKLLLYDLVVQEM 335 (384)
Q Consensus 319 ~~~~~~l~~yd~~t~~~ 335 (384)
....++.++||..|++-
T Consensus 6 ~~~~g~~YYyN~~T~~s 22 (27)
T 1e0n_A 6 IHENGRPLYYNAEQKTK 22 (27)
T ss_dssp EESSSSEEEEETTTTEE
T ss_pred ECCCCCeEEEECCCCCE
Confidence 44567799999999863
No 219
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=23.48 E-value=4e+02 Score=23.84 Aligned_cols=98 Identities=7% Similarity=-0.016 Sum_probs=51.9
Q ss_pred ccEEEEEEcCCceeee--ecCCCCCCCCceeEEEE-C---CeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccc
Q 038188 234 SKLILLFRISDEEFQE--IQRPCIPYTPFESLAPL-N---GSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSP 307 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~--i~~P~~~~~~~~~l~~~-~---G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~ 307 (384)
.+.|..+|+.+..... +.........-..+... + |++.+....+ ..+.||-+....-.... +........-
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d--~~i~vwd~~~~~~~~~~-~~~h~~~v~~ 246 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD--EHIKISHYPQCFIVDKW-LFGHKHFVSS 246 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT--SCEEEEEESCTTCEEEE-CCCCSSCEEE
T ss_pred CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC--CcEEEEECCCCceeeee-ecCCCCceEE
Confidence 5677888886654331 11100001122233333 5 6666655555 78999999763222221 1122212233
Q ss_pred eEEEeCCEE-EEEEeCCeEEEEECCCCeE
Q 038188 308 CGFWKNNAV-LMESINGKLLLYDLVVQEM 335 (384)
Q Consensus 308 ~~~~~~~~i-l~~~~~~~l~~yd~~t~~~ 335 (384)
+.+. ++.. +....++.+.+||+++++.
T Consensus 247 ~~~s-d~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 247 ICCG-KDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp EEEC-STTEEEEEESSSEEEEEETTTCCE
T ss_pred EEEC-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 4445 5544 4456678899999999874
No 220
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=23.41 E-value=3.3e+02 Score=22.81 Aligned_cols=31 Identities=13% Similarity=0.202 Sum_probs=19.5
Q ss_pred EEEeCCEEEEEEeCCeEEEEECCCCeEEEEe
Q 038188 309 GFWKNNAVLMESINGKLLLYDLVVQEMRDLG 339 (384)
Q Consensus 309 ~~~~~~~il~~~~~~~l~~yd~~t~~~~~v~ 339 (384)
.+..++.|++.+.++.++.||..++.+....
T Consensus 221 ~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~ 251 (330)
T 3hxj_A 221 AISEDGTIYVTSLDGHLYAINPDGTEKWRFK 251 (330)
T ss_dssp EECTTSCEEEEETTTEEEEECTTSCEEEEEE
T ss_pred EECCCCeEEEEcCCCeEEEECCCCCEeEEee
Confidence 3444566766666666888877666655544
No 221
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=23.15 E-value=1.5e+02 Score=23.34 Aligned_cols=39 Identities=10% Similarity=0.132 Sum_probs=26.9
Q ss_pred CeEEEEccCcc-cccccCCCCCCCCcccccceeeeEEeeeCCCCCEEEEEE
Q 038188 119 GLITLWNPATK-ECRTLPNYKKNLPALATFLKRNAIFGLCDASGDYKVVFI 168 (384)
Q Consensus 119 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~ 168 (384)
-.+++.||.|+ +|+..-... ..+.+-+|...+.|+|+.+
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~~-----------~~V~i~~d~~rnsyRIvg~ 55 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKHA-----------VTVSYFYDSTRNVYRIISL 55 (168)
T ss_dssp EEEEEECTTSSCCSEESCSSC-----------EEEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCCC-----------eEEEEEEcCCCCEEEEEEc
Confidence 36788999997 896533221 2344558888888999885
No 222
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=23.04 E-value=5.5e+02 Score=25.30 Aligned_cols=145 Identities=10% Similarity=0.063 Sum_probs=70.4
Q ss_pred EEEEEEcCCCccccccCCccccceee-cCCcceEEE--CceEEEEEeecCCCCccEEEEEEcCCceeeeecCCC-C---C
Q 038188 184 HVAVYTSSTDSWRVSKGNIKWIPYVF-ESYYNNANL--NGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPC-I---P 256 (384)
Q Consensus 184 ~~~vyss~t~~W~~~~~~~~~~~~~~-~~~~~~v~~--~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~-~---~ 256 (384)
.+..|+..++.++...... ..+... ...-.+++. +|. .|+.. ...|..+|..+..|..+.... . .
T Consensus 236 Gl~~~~~~~~~~~~~~~~~-~~~~~l~~~~i~~i~~d~~g~-lWigt------~~Gl~~~~~~~~~~~~~~~~~~~~~~l 307 (795)
T 4a2l_A 236 GLFLINPKTKEIKNYLHSP-SNPKSISSNYIRSLAMDSQNR-LWIGT------FNDLNIYHEGTDSFASYSSNPVENGSL 307 (795)
T ss_dssp CEEEEETTTTEEEEECCCT-TCTTSCSCSBEEEEEECTTSC-EEEEE------SSCEEEEETTTTEEEEECCCTTSTTSC
T ss_pred CeEEEeCCCCeEEEeecCC-CCccccCCCeEEEEEEcCCCC-EEEEe------CChhheEcCCCCeEEEEecCCCCCCCC
Confidence 4667777777766543210 000000 011123333 454 56664 237899999999998774322 1 1
Q ss_pred -CCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCcc--ccceEE--EeCCEEEEEEeCCeEEEEEC
Q 038188 257 -YTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGV--KSPCGF--WKNNAVLMESINGKLLLYDL 330 (384)
Q Consensus 257 -~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~--~~~~~~--~~~~~il~~~~~~~l~~yd~ 330 (384)
...-..+.+- +|.|.+.... ..+..+-.+...+...........+ ....++ .+++.+.+.+..+.+..||.
T Consensus 308 ~~~~i~~i~~D~~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~ 384 (795)
T 4a2l_A 308 SQRSVRSIFMDSQGGMWLGTYF---GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNP 384 (795)
T ss_dssp SSSCEEEEEECTTSCEEEEESS---SCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECT
T ss_pred CCCcEEEEEEeCCcCEEEEECC---CCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcC
Confidence 1112233332 4556554432 2233332222333322111100111 112233 33577877777656999999
Q ss_pred CCCeEEEEe
Q 038188 331 VVQEMRDLG 339 (384)
Q Consensus 331 ~t~~~~~v~ 339 (384)
++++++.+.
T Consensus 385 ~~~~~~~~~ 393 (795)
T 4a2l_A 385 ITQRFTSYT 393 (795)
T ss_dssp TTCCEEEEC
T ss_pred CCCcEEEEe
Confidence 999887764
No 223
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=22.81 E-value=3.2e+02 Score=22.45 Aligned_cols=107 Identities=9% Similarity=0.028 Sum_probs=57.7
Q ss_pred eEEECceEEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCCCceeEEE-E-CCeEEEEEecCCCCeEEEEEEcCCce
Q 038188 215 NANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYTPFESLAP-L-NGSIALLHLDESNQYIEIWVMNEMNW 292 (384)
Q Consensus 215 ~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~-~-~G~L~l~~~~~~~~~l~iW~l~~~~W 292 (384)
++..+|...... ...+.|..+|. .+....+.... ..-..+.. . ++.+.++...+ ..+.+|-...
T Consensus 109 ~~~~~~~~l~~~-----~~d~~i~~~d~-~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~~~d--~~i~i~d~~~--- 174 (313)
T 3odt_A 109 SLSFQDGVVISG-----SWDKTAKVWKE-GSLVYNLQAHN---ASVWDAKVVSFSENKFLTASAD--KTIKLWQNDK--- 174 (313)
T ss_dssp EEEEETTEEEEE-----ETTSEEEEEET-TEEEEEEECCS---SCEEEEEEEETTTTEEEEEETT--SCEEEEETTE---
T ss_pred EEEecCCEEEEE-----eCCCCEEEEcC-CcEEEecccCC---CceeEEEEccCCCCEEEEEECC--CCEEEEecCc---
Confidence 344456544444 33667888882 22222232221 11122222 2 56666665555 7899997332
Q ss_pred eEEEEeCC-CCccccceEEEeCCEEEEEEeCCeEEEEECCCCeEE
Q 038188 293 IQQFAIGP-FLGVKSPCGFWKNNAVLMESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 293 ~~~~~i~~-~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~t~~~~ 336 (384)
....+.. ......-+.+.+++.++....++.+.+||+++++..
T Consensus 175 -~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 175 -VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp -EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred -eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh
Confidence 2222322 222234455666778666677888999999987643
No 224
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=22.73 E-value=3.2e+02 Score=22.44 Aligned_cols=96 Identities=9% Similarity=0.037 Sum_probs=52.6
Q ss_pred ccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEe
Q 038188 234 SKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWK 312 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 312 (384)
.+.|..+|..+ ....+..+. ...-..+... +|. .++...+ ..+.+|-+.. ...+..+........-+.+.+
T Consensus 164 d~~i~i~d~~~-~~~~~~~~~--~~~i~~~~~~~~~~-~~~~~~d--g~i~i~d~~~--~~~~~~~~~~~~~i~~~~~~~ 235 (313)
T 3odt_A 164 DKTIKLWQNDK-VIKTFSGIH--NDVVRHLAVVDDGH-FISCSND--GLIKLVDMHT--GDVLRTYEGHESFVYCIKLLP 235 (313)
T ss_dssp TSCEEEEETTE-EEEEECSSC--SSCEEEEEEEETTE-EEEEETT--SEEEEEETTT--CCEEEEEECCSSCEEEEEECT
T ss_pred CCCEEEEecCc-eEEEEeccC--cccEEEEEEcCCCe-EEEccCC--CeEEEEECCc--hhhhhhhhcCCceEEEEEEec
Confidence 56677777332 222232211 1122233333 566 3334444 7899998875 234444433332233345555
Q ss_pred CCEEEEEEeCCeEEEEECCCCeEEE
Q 038188 313 NNAVLMESINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 313 ~~~il~~~~~~~l~~yd~~t~~~~~ 337 (384)
++.++....++.+.+||+++++...
T Consensus 236 ~~~l~~~~~dg~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 236 NGDIVSCGEDRTVRIWSKENGSLKQ 260 (313)
T ss_dssp TSCEEEEETTSEEEEECTTTCCEEE
T ss_pred CCCEEEEecCCEEEEEECCCCceeE
Confidence 6677666778899999999987544
No 225
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=22.70 E-value=3.4e+02 Score=22.69 Aligned_cols=71 Identities=18% Similarity=0.149 Sum_probs=42.2
Q ss_pred CeEEEEEecCCCCeEEEEEEcC---CceeEEEEeCCCCccccceEEEeCCEEEEE-EeCCeEEEEECCCCeEEEEee
Q 038188 268 GSIALLHLDESNQYIEIWVMNE---MNWIQQFAIGPFLGVKSPCGFWKNNAVLME-SINGKLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 268 G~L~l~~~~~~~~~l~iW~l~~---~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~t~~~~~v~~ 340 (384)
|++.+....+ ..+.||-++. ..-.....+........-+.+.+++..++. ..++.+..++..+........
T Consensus 51 ~~~l~S~s~D--~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~ 125 (340)
T 4aow_A 51 PDMILSASRD--KTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV 125 (340)
T ss_dssp TTEEEEEETT--SCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEcCC--CeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec
Confidence 4555445555 7899999976 223334444433322333455556665444 557778899999887655443
No 226
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=22.10 E-value=3.7e+02 Score=22.93 Aligned_cols=67 Identities=18% Similarity=0.245 Sum_probs=38.0
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCC----ce-eEEEEeCCCCccccceEEEeCCEEEEE-EeCCeEEEEECCCCeE
Q 038188 267 NGSIALLHLDESNQYIEIWVMNEM----NW-IQQFAIGPFLGVKSPCGFWKNNAVLME-SINGKLLLYDLVVQEM 335 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~~----~W-~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~t~~~ 335 (384)
+|.+.+....+ ..+.||-+... .. .....+..+.....-+.+.+++.+++. ..++.+.+||+++++.
T Consensus 38 d~~~l~sgs~D--~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~ 110 (343)
T 2xzm_R 38 DSPVLISGSRD--KTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTT 110 (343)
T ss_dssp CCCEEEEEETT--SCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCE
T ss_pred CCCEEEEEcCC--CEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 45555555555 78999998751 11 122233322222233445556655554 5577899999998764
No 227
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=21.52 E-value=2.9e+02 Score=24.69 Aligned_cols=31 Identities=26% Similarity=0.367 Sum_probs=24.2
Q ss_pred cceEEE---eCCEEEEEEeCCeEEEEECCCCeEE
Q 038188 306 SPCGFW---KNNAVLMESINGKLLLYDLVVQEMR 336 (384)
Q Consensus 306 ~~~~~~---~~~~il~~~~~~~l~~yd~~t~~~~ 336 (384)
.|+++. +-|.|++.+..|-++.||++|++.-
T Consensus 261 FPVamqvs~kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 261 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred ceEEEEecccCCEEEEEeCCcEEEEEEcccCcEE
Confidence 355543 2578899999999999999999853
No 228
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=21.42 E-value=4.1e+02 Score=23.17 Aligned_cols=70 Identities=19% Similarity=0.113 Sum_probs=39.6
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCC-CCccccceEEEeCCE--EEEEEeCCeEEEEECCCCe--EEEEee
Q 038188 267 NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGP-FLGVKSPCGFWKNNA--VLMESINGKLLLYDLVVQE--MRDLGR 340 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~-~~~~~~~~~~~~~~~--il~~~~~~~l~~yd~~t~~--~~~v~~ 340 (384)
+|++.++...+ ..+.+|-+... .....+.. ......-+.+.+++. ++....++.+.+||+++.+ +..+..
T Consensus 258 ~~~~l~~~~~d--g~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 258 YGKYVIAGHVS--GVITVHNVFSK--EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp TTEEEEEEETT--SCEEEEETTTC--CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE
T ss_pred CCCEEEEEcCC--CeEEEEECCCC--ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc
Confidence 56665555555 78999988752 23333322 121223344455554 4445667889999999863 444443
No 229
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=21.08 E-value=4.3e+02 Score=23.29 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=39.0
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCC--CCccccceEEEeCCEEEE-EEeCCeEEEEECCCCeEEE
Q 038188 267 NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGP--FLGVKSPCGFWKNNAVLM-ESINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~--~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~t~~~~~ 337 (384)
+|.+.+....+ ..+.+|-+.... .+.++.. ......-+.+.+++..++ ...++.+.+||+++++...
T Consensus 181 ~~~~l~~~~~d--~~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL--SRVIIFDIRTLE--RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT--SEEEEEETTTCC--EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC--CeEEEEeCCCCe--eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEE
Confidence 45555555555 789999887522 2233322 222223344555665544 4667789999999877533
No 230
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.03 E-value=4e+02 Score=22.90 Aligned_cols=146 Identities=8% Similarity=0.000 Sum_probs=69.4
Q ss_pred ccEEEEEEcCCCccccccCCccccceeecCCcceEEE--Cce-EEEEEeecCCCCccEEEEEEcCCceeeeecCCCCCCC
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKWIPYVFESYYNNANL--NGV-FYWFVSRAGDFHSKLILLFRISDEEFQEIQRPCIPYT 258 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~~~~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~il~fD~~~~~~~~i~~P~~~~~ 258 (384)
...+.+++..++..+.+... .... ...... +|. +++............|..+|+.+.....+...... .
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~--~~~~-----~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~-~ 238 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQD--TAWL-----GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEG-E 238 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEE--SSCE-----EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTT-E
T ss_pred cceEEEEECCCCcEEeeccC--Cccc-----ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCC-c
Confidence 44677777777665544211 0000 112222 354 66655311001125788899887766554321100 0
Q ss_pred CceeEEEE-CCe-EEEEEecCCCCe--EEEEEEcCCceeEEEEeCCCCccccceEEEe-CCEEEEEE-------------
Q 038188 259 PFESLAPL-NGS-IALLHLDESNQY--IEIWVMNEMNWIQQFAIGPFLGVKSPCGFWK-NNAVLMES------------- 320 (384)
Q Consensus 259 ~~~~l~~~-~G~-L~l~~~~~~~~~--l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~------------- 320 (384)
....+... +|+ |+++........ +.+|-++......+...+ ... ..+.. ++.+++..
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~---~~~--~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP---PCS--HLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---SEE--EEEECSSSSEEEEEECCC---------
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---CCC--CCccCCCCceEEEecCCcceeeccccc
Confidence 11122333 555 666544433334 444444433333333221 111 44445 66554432
Q ss_pred ----eCCeEEEEECCCCeEEEEee
Q 038188 321 ----INGKLLLYDLVVQEMRDLGR 340 (384)
Q Consensus 321 ----~~~~l~~yd~~t~~~~~v~~ 340 (384)
....++.+|+++++.+.+..
T Consensus 314 ~~~~~~~~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp -CCCCCCEEEEEETTTTBCCEEEE
T ss_pred cccCCCCcEEEEecccCceEEccC
Confidence 23579999999988776654
No 231
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=21.01 E-value=3.8e+02 Score=22.59 Aligned_cols=114 Identities=11% Similarity=0.029 Sum_probs=62.2
Q ss_pred EECceEEEEEeecCCCCccEEEEEEcCCcee-eeecCCCCCC-----CC-ceeEEEE-CCe-EEEEEecCCCCeEEEEEE
Q 038188 217 NLNGVFYWFVSRAGDFHSKLILLFRISDEEF-QEIQRPCIPY-----TP-FESLAPL-NGS-IALLHLDESNQYIEIWVM 287 (384)
Q Consensus 217 ~~~G~lywl~~~~~~~~~~~il~fD~~~~~~-~~i~~P~~~~-----~~-~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l 287 (384)
.-+|...|+.. ...+.|..+|+.+.+. ..++.+.... .. ...+... +|+ |++..... ...+.+|-+
T Consensus 97 s~dg~~l~v~~----~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~i~~~d~ 171 (353)
T 3vgz_A 97 NNTTQTLWFGN----TVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-ESVIWVVDG 171 (353)
T ss_dssp ETTTTEEEEEE----TTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-SCEEEEEET
T ss_pred CCCCCEEEEEe----cCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-CceEEEEcC
Confidence 33666334443 3357899999987665 4456543221 00 1223443 555 55544322 255555544
Q ss_pred cCCceeEEEEeCCCCccccceEEEeCC-EEEEEEeCCeEEEEECCCCeEEE
Q 038188 288 NEMNWIQQFAIGPFLGVKSPCGFWKNN-AVLMESINGKLLLYDLVVQEMRD 337 (384)
Q Consensus 288 ~~~~W~~~~~i~~~~~~~~~~~~~~~~-~il~~~~~~~l~~yd~~t~~~~~ 337 (384)
+ ....+..+.........+.+..++ .+++...++.+..||+++++...
T Consensus 172 ~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~ 220 (353)
T 3vgz_A 172 G--NIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILS 220 (353)
T ss_dssp T--TTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEE
T ss_pred C--CCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEE
Confidence 4 344555554222123345566555 46666667789999999988654
No 232
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=20.72 E-value=4.2e+02 Score=23.09 Aligned_cols=96 Identities=13% Similarity=0.141 Sum_probs=54.3
Q ss_pred ccEEEEEEcCCceeee-ecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEe-CCCCcc-ccceE
Q 038188 234 SKLILLFRISDEEFQE-IQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAI-GPFLGV-KSPCG 309 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~-i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i-~~~~~~-~~~~~ 309 (384)
.+.|..+|+.+.+... +...... ..-..+... +|.+.+....+ ..+.||-+... ..+..+ ...... ..-+.
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~ 227 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHP-DTIYSVDWSRDGALICTSCRD--KRVRVIEPRKG--TVVAEKDRPHEGTRPVHAV 227 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCC-SCEEEEEECTTSSCEEEEETT--SEEEEEETTTT--EEEEEEECSSCSSSCCEEE
T ss_pred CCEEEEEECCCCCccEEEecCCCC-CceEEEEECCCCCEEEEEecC--CcEEEEeCCCC--ceeeeeccCCCCCcceEEE
Confidence 5678889998765543 3211111 122233333 66665555555 78999988752 233344 222211 22344
Q ss_pred EEeCCEEEEEE----eCCeEEEEECCCCe
Q 038188 310 FWKNNAVLMES----INGKLLLYDLVVQE 334 (384)
Q Consensus 310 ~~~~~~il~~~----~~~~l~~yd~~t~~ 334 (384)
+..++.++... .++.+.+||+++.+
T Consensus 228 ~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 228 FVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp ECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred EcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 55677776664 56789999998854
No 233
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=20.69 E-value=3.8e+02 Score=22.52 Aligned_cols=98 Identities=7% Similarity=-0.005 Sum_probs=51.1
Q ss_pred ccEEEEEEcCCceeee-ec---CCCCCCCCceeEEEE-CCe-EEEEEecCCCCeEEEEEEcC-----------------C
Q 038188 234 SKLILLFRISDEEFQE-IQ---RPCIPYTPFESLAPL-NGS-IALLHLDESNQYIEIWVMNE-----------------M 290 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~-i~---~P~~~~~~~~~l~~~-~G~-L~l~~~~~~~~~l~iW~l~~-----------------~ 290 (384)
.+.|..+|+.+..... +. +... ...-..+... +|+ +.+....+ ..+.||-+.. .
T Consensus 233 dg~i~i~d~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~g~~~~~~~ 309 (357)
T 3i2n_A 233 EGKFHVFDMRTQHPTKGFASVSEKAH-KSTVWQVRHLPQNRELFLTAGGA--GGLHLWKYEYPIQRSKKDSEGIEMGVAG 309 (357)
T ss_dssp TTEEEEEEEEEEETTTEEEEEEEECC-SSCEEEEEEETTEEEEEEEEETT--SEEEEEEEECCSCC--CCTTSCCCCCCC
T ss_pred CCeEEEEeCcCCCcccceeeeccCCC-cCCEEEEEECCCCCcEEEEEeCC--CcEEEeecCCCcccccccCCCCcccccc
Confidence 5677778876543221 11 1111 1222233333 455 44444444 7999999975 1
Q ss_pred ceeEEEEeCCCCccccceEEEeCCEEEE--EEeCCeEEEEECCCCe
Q 038188 291 NWIQQFAIGPFLGVKSPCGFWKNNAVLM--ESINGKLLLYDLVVQE 334 (384)
Q Consensus 291 ~W~~~~~i~~~~~~~~~~~~~~~~~il~--~~~~~~l~~yd~~t~~ 334 (384)
.+..+..+.....-..-+.+.+++..++ ...++.+.+||+++.+
T Consensus 310 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 310 SVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred ccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 3445555543332223344555665444 3557889999988653
No 234
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=20.64 E-value=4.1e+02 Score=22.93 Aligned_cols=92 Identities=8% Similarity=0.002 Sum_probs=46.5
Q ss_pred ccEEEEEEcCCceee-eecCCCCCCCCceeEEEE-CC-eEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEE
Q 038188 234 SKLILLFRISDEEFQ-EIQRPCIPYTPFESLAPL-NG-SIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGF 310 (384)
Q Consensus 234 ~~~il~fD~~~~~~~-~i~~P~~~~~~~~~l~~~-~G-~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 310 (384)
.+.|..+|+.+.+.. .+.... ..-..+... +| ++.+....+ ..+.||-++.. ..+..+ .+.....-+++
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~---~~v~~l~~sp~~~~~lasgs~D--~~i~iwd~~~~--~~~~~~-~H~~~V~~vaf 319 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHS---QNITGLAYSYHSSPFLASISED--CTVAVLDADFS--EVFRDL-SHRDFVTGVAW 319 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCS---SCEEEEEECSSSSCCEEEEETT--SCEEEECTTSC--EEEEEC-CCSSCEEEEEE
T ss_pred ccceeEEECCCCcEeEEEeccc---eeEEEEEEcCCCCCEEEEEeCC--CEEEEEECCCC--cEeEEC-CCCCCEEEEEE
Confidence 566778888765432 222221 122233332 44 444444444 78999976542 222222 22222233455
Q ss_pred Ee-CCEEEEE-EeCCeEEEEECCCC
Q 038188 311 WK-NNAVLME-SINGKLLLYDLVVQ 333 (384)
Q Consensus 311 ~~-~~~il~~-~~~~~l~~yd~~t~ 333 (384)
.+ ++.+|+. ..++.+.+||+.++
T Consensus 320 sP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 320 SPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CSSSTTEEEEEETTSCEEEEECC--
T ss_pred eCCCCCEEEEEcCCCeEEEEECCCC
Confidence 53 5555554 56788999998664
No 235
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=20.49 E-value=3.8e+02 Score=22.46 Aligned_cols=142 Identities=10% Similarity=0.010 Sum_probs=68.4
Q ss_pred ccEEEEEEcCCCccccccCCccc-cceeecCCcceEEECceEEEEEeecCCCCccEEEEEEcCCceee-eecCCCCC---
Q 038188 182 HAHVAVYTSSTDSWRVSKGNIKW-IPYVFESYYNNANLNGVFYWFVSRAGDFHSKLILLFRISDEEFQ-EIQRPCIP--- 256 (384)
Q Consensus 182 ~~~~~vyss~t~~W~~~~~~~~~-~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~~il~fD~~~~~~~-~i~~P~~~--- 256 (384)
...+.+++..++.....-..... .+. ...+.-+|...++.. ...+.|..+|+.+.+.. .+..+...
T Consensus 20 ~~~v~~~d~~~~~~~~~~~~~~~~~~~-----~~~~s~dg~~~~v~~----~~~~~i~~~d~~t~~~~~~~~~~~~~~~~ 90 (349)
T 1jmx_B 20 PNNLHVVDVASDTVYKSCVMPDKFGPG-----TAMMAPDNRTAYVLN----NHYGDIYGIDLDTCKNTFHANLSSVPGEV 90 (349)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSSC-----EEEECTTSSEEEEEE----TTTTEEEEEETTTTEEEEEEESCCSTTEE
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCc-----eeEECCCCCEEEEEe----CCCCcEEEEeCCCCcEEEEEEcccccccc
Confidence 45677888877654321111000 011 111222565444443 34678999999877654 45554321
Q ss_pred CCCceeEEEE-CCe-EEEEEec---------CCCCeEEEEEEcC---CceeEEEEeCCCCccccceEEEeCCEEEEEEeC
Q 038188 257 YTPFESLAPL-NGS-IALLHLD---------ESNQYIEIWVMNE---MNWIQQFAIGPFLGVKSPCGFWKNNAVLMESIN 322 (384)
Q Consensus 257 ~~~~~~l~~~-~G~-L~l~~~~---------~~~~~l~iW~l~~---~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~ 322 (384)
......+... +|+ |++.... .....+.+|-++. ..-...... +. -..-+.+.+++++++ ..
T Consensus 91 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~--~~~~~~~s~dg~l~~-~~- 165 (349)
T 1jmx_B 91 GRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PR--QVYLMRAADDGSLYV-AG- 165 (349)
T ss_dssp EECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CS--SCCCEEECTTSCEEE-ES-
T ss_pred cccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CC--cccceeECCCCcEEE-cc-
Confidence 0011233333 554 4444322 1125777777765 111111211 11 122344556777544 33
Q ss_pred CeEEEEECCCCeEEE
Q 038188 323 GKLLLYDLVVQEMRD 337 (384)
Q Consensus 323 ~~l~~yd~~t~~~~~ 337 (384)
..+..||+++++...
T Consensus 166 ~~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 166 PDIYKMDVKTGKYTV 180 (349)
T ss_dssp SSEEEECTTTCCEEE
T ss_pred CcEEEEeCCCCceec
Confidence 349999999987654
No 236
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=20.18 E-value=2.8e+02 Score=26.44 Aligned_cols=63 Identities=11% Similarity=0.169 Sum_probs=36.9
Q ss_pred CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEeCCEEEEE-EeCCeEEEEECCC
Q 038188 267 NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWKNNAVLME-SINGKLLLYDLVV 332 (384)
Q Consensus 267 ~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~t 332 (384)
+|++.+....+ ..+.+|-++.......... .+..-..-+.+.+++..++. ..++.+..||.++
T Consensus 459 dg~~lasgs~D--~~v~lwd~~~~~~~~~~~~-~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 459 DKQFVAVGGQD--SKVHVYKLSGASVSEVKTI-VHPAEITSVAFSNNGAFLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp TSCEEEEEETT--SEEEEEEEETTEEEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGG
T ss_pred CCCEEEEeCCC--CeEEEEEccCCceeeeecc-CCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCC
Confidence 45544444444 7899999876444333332 12212334556667766555 5567799999887
No 237
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=20.10 E-value=4e+02 Score=22.49 Aligned_cols=95 Identities=11% Similarity=0.125 Sum_probs=53.7
Q ss_pred ccEEEEEEcCCceeeeecCCCCCCCCceeEEEE-CCeEEEEEecCCCCeEEEEEEcCCceeEEEEeCCCCccccceEEEe
Q 038188 234 SKLILLFRISDEEFQEIQRPCIPYTPFESLAPL-NGSIALLHLDESNQYIEIWVMNEMNWIQQFAIGPFLGVKSPCGFWK 312 (384)
Q Consensus 234 ~~~il~fD~~~~~~~~i~~P~~~~~~~~~l~~~-~G~L~l~~~~~~~~~l~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 312 (384)
.+.|..+|+.+.+....- ... ...-..+... +|++.+....+ ..+.||-+... ..+..+.... -..-+.+.+
T Consensus 175 d~~i~~wd~~~~~~~~~~-~~h-~~~v~~~~~sp~g~~l~s~~~d--g~i~iwd~~~~--~~~~~~~~~~-~v~~~~~sp 247 (319)
T 3frx_A 175 DKMVKAWNLNQFQIEADF-IGH-NSNINTLTASPDGTLIASAGKD--GEIMLWNLAAK--KAMYTLSAQD-EVFSLAFSP 247 (319)
T ss_dssp TSCEEEEETTTTEEEEEE-CCC-CSCEEEEEECTTSSEEEEEETT--CEEEEEETTTT--EEEEEEECCS-CEEEEEECS
T ss_pred CCEEEEEECCcchhheee-cCC-CCcEEEEEEcCCCCEEEEEeCC--CeEEEEECCCC--cEEEEecCCC-cEEEEEEcC
Confidence 567788888765543211 111 1112233333 66666655555 89999988752 2333333222 123355666
Q ss_pred CCEEEEEEeCCeEEEEECCCCeE
Q 038188 313 NNAVLMESINGKLLLYDLVVQEM 335 (384)
Q Consensus 313 ~~~il~~~~~~~l~~yd~~t~~~ 335 (384)
++..+.......+.+|+++++..
T Consensus 248 ~~~~la~~~~~~i~v~~~~~~~~ 270 (319)
T 3frx_A 248 NRYWLAAATATGIKVFSLDPQYL 270 (319)
T ss_dssp SSSEEEEEETTEEEEEEETTEEE
T ss_pred CCCEEEEEcCCCcEEEEeCcCee
Confidence 77777766666788888887654
Done!