BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038190
(531 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 238 bits (607), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 242/478 (50%), Gaps = 70/478 (14%)
Query: 41 SNSVSTVEEKTKLLKYLSENSKSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGK 100
S+SVS + + +L K ++ +++LNDA+ F+ M+ +P P + FN LL A+
Sbjct: 44 SSSVSGGDLRERLSK-----TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL 98
Query: 101 KYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTL 160
K Y I L +++ +G+ D + NI++NCFC VS A LG++L+ + PD VT+
Sbjct: 99 KKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTI 158
Query: 161 GCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFL 220
G L+ G C + + ++A L K V +P+++ Y +IID LCK VN F
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA----YNAIIDSLCKTKRVNDAFDFFK 214
Query: 221 DMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVL 280
+++ +GI P+ Y +L+ C + W DA S ++ P+V+
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK-------------ITPNVI 261
Query: 281 SYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSI 340
+Y +++++ K+ V +AKELF +M I PD+V YSSLI+G CL RID+A ++F +
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 341 ESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMIS----------------------- 377
S+GC+ D SYNTLIN + K ++VE+ + L+ EM
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 378 ------------MGVRP-------------DNSCILEAAELFRTLHNTKFELDLTVFNCL 412
G+ P DN + +A +F + + +LD+ + +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 413 VDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
+ G+CK+ ++ AW LF L G +P++VTYT M+ GLC +G + + L M+++
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 168/378 (44%), Gaps = 58/378 (15%)
Query: 71 ALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMN 130
AL M+ + P + SL+ + + + L +++ IG PD V+ N +++
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 131 CFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRP 190
CK V+DAF I RK P+VVT L+ GLC ++++A+ L + + P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 191 NVI-------------------------------PNVICYASIIDGLCKDGFVNKVRVLF 219
NVI P+++ Y+S+I+GLC +++ +F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 220 LDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAK------------GNT------------S 255
M +G D YN+LI +C A ED NT +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 256 AALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVV 315
++ +EF + G+ PD+ +Y ++ LC + ++KA +F DM+ R + D+V
Sbjct: 379 GDVDKAQEFFSQMDFFGI--SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 316 VYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEM 375
Y+++I G C G++++A LF S+ +G PD +Y T+++ + E +LY +M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 376 ISMGVRPDNSCILEAAEL 393
G+ N C L ++
Sbjct: 497 KQEGLMK-NDCTLSDGDI 513
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 93/232 (40%), Gaps = 39/232 (16%)
Query: 291 KDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTS 350
+D+ ++ A +LF DM P +V ++ L+ + + D L +E G D
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 351 SYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFN 410
++N +IN + +V ALS+ G+M+ +G PD I
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTI----------------------G 159
Query: 411 CLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
LV+G C+ R+ A L K+ G +P++V Y +I LC + A+D ++E K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 471 IRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLLPSFLSR 522
++P+ +T + L L + LL + +
Sbjct: 220 -----------------GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 247/520 (47%), Gaps = 115/520 (22%)
Query: 59 ENSKSGEVEL--NDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTI 116
E +SG V++ +DA+ F MIH +P P + F+ L A+A K Y + L +++
Sbjct: 58 ERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK 117
Query: 117 GLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEA 176
G+ + +L+I++NCFC+ + AF A+G+I++ + P+ +T LI GLC++G+ +EA
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 177 ----------------------------SG-------LFTKFVAFDCRPNVIP-----NV 196
SG L K V + C+PN + NV
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 197 IC--------------------------YASIIDGLCKDGFVNKVRVLFLDMKGRGIYPD 230
+C Y+ IIDGLCK G ++ LF +M+ +GI +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 231 AFVYNSLIRVYCCAVNWEDA----------------------------KGNTSAALELHE 262
YN LI +C A W+D +G A ELH+
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 263 EFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLID 322
E ++ PD ++Y S+I+ CK+ +DKA ++ M S+G P++ ++ LI+
Sbjct: 358 EMIHRG------IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 323 GYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP 382
GYC RIDD +LF + G + DT +YNTLI + ++ K+ A L+ EM+S V P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 383 -------------DNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELF 429
DN +A E+F + +K ELD+ ++N ++ G+C + ++ AW+LF
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 430 KKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE 469
LP G +P V TY +MI GLC +G + +A L MEE
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 148/316 (46%), Gaps = 17/316 (5%)
Query: 68 LNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNI 127
L++A FN M T + ++N L+G + + L + + P+ V+ ++
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 128 LMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFD 187
L++ F K + +A ++ + +PD +T LI G C + +A+ + V+
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 188 CRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNW 247
C PN+ + +I+G CK ++ LF M RG+ D YN+LI+ +C
Sbjct: 399 CDPNIRT----FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC----- 449
Query: 248 EDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKS 307
G + A EL +E V+ P++++Y +++ LC + +KA E+F ++
Sbjct: 450 --ELGKLNVAKELFQEMVSRK------VPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 308 RGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEE 367
+ D+ +Y+ +I G C ++DDA LF S+ +G P +YN +I K + E
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 368 ALSLYGEMISMGVRPD 383
A L+ +M G PD
Sbjct: 562 AELLFRKMEEDGHAPD 577
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%), Gaps = 40/213 (18%)
Query: 329 RIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCIL 388
+ DDA LF + +P ++ L ++ +K ++ + L+L +M
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM------------- 114
Query: 389 EAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMI 448
EL HN L + +++ C+ +L A+ K+ + G EPN +T++ +I
Sbjct: 115 ---ELKGIAHN------LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLI 165
Query: 449 CGLCIEGGIEKAYDLLPDMEEKIRE-------------CL-----KAIELLHKMAKRYVK 490
GLC+EG + +A +L+ M E + CL +A+ L+ KM + +
Sbjct: 166 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQ 225
Query: 491 PDEITVSILEELLNKDENCHECMNLLPSFLSRN 523
P+ +T + ++ K M LL RN
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 235 bits (600), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 237/485 (48%), Gaps = 80/485 (16%)
Query: 59 ENSKSGEVEL--NDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTI 116
E +SG V++ +DA+ F MI +P P + F+ A+A K + + ++L
Sbjct: 58 ERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117
Query: 117 GLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEA 176
G+ + +LNI++NCFC+ A+ LG++++ + PD T LI+GL ++GK +EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 177 SGLFTKFVAFDCRPNV-----IPNVIC--------------------------YASIIDG 205
L + V C+P+V I N IC Y++IID
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 206 LCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDA--------------- 250
LC+DG ++ LF +M+ +GI YNSL+R C A W D
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 251 -------------KGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDK 297
+G A EL++E + P++++Y ++++ C + +
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRG------ISPNIITYNTLMDGYCMQNRLSE 351
Query: 298 AKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLIN 357
A + M PD+V ++SLI GYC++ R+DD K+F +I G + + +Y+ L+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 358 SYSKIEKVEEALSLYGEMISMGVRPD-------------NSCILEAAELFRTLHNTKFEL 404
+ + K++ A L+ EM+S GV PD N + +A E+F L +K +L
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 405 DLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLL 464
+ ++ +++G+CK ++ AW LF LP G +PNV+TYTVMI GLC +G + +A LL
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 465 PDMEE 469
MEE
Sbjct: 532 RKMEE 536
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 163/361 (45%), Gaps = 26/361 (7%)
Query: 27 PISLNSENEPSSLHSNSVSTVEEKTKLLKYLSENSKSGEVELNDALCFFNYMIHMQPTPF 86
ISL E E + S+ V+ L++ L + K ND M+ + P
Sbjct: 247 AISLFKEMETKGIKSSVVTY----NSLVRGLCKAGK-----WNDGALLLKDMVSREIVPN 297
Query: 87 MPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALG 146
+ +FN LL + L + + T G+ P+ ++ N LM+ +C +S+A L
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 147 RILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGL 206
++R SPD+VT LI+G CM + + +F + ++ N + Y+ ++ G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI----SKRGLVANAVTYSILVQGF 413
Query: 207 CKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVN 266
C+ G + LF +M G+ PD Y L+ C G ALE+ E+
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC-------DNGKLEKALEIFEDLQK 466
Query: 267 GNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCL 326
+LG++ Y +II +CK V+ A LF + +G+ P+V+ Y+ +I G C
Sbjct: 467 SKMDLGIV------MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 327 MGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSC 386
G + +A L +E +G P+ +YNTLI ++ + + + L EM S G D S
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 387 I 387
I
Sbjct: 581 I 581
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 22/179 (12%)
Query: 292 DVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSS 351
D+ D A LF +M +P +V +S + + +E G + +
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 352 YNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNC 411
N +IN + + K A S+ G+++ +G PD T FN
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT----------------------TTFNT 163
Query: 412 LVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
L+ GL ++ A L ++ G +P+VVTY ++ G+C G A DLL MEE+
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER 222
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 251/541 (46%), Gaps = 116/541 (21%)
Query: 38 SLHSNSVSTVEEKTKLLKYLSENSKSGEVEL--NDALCFFNYMIHMQPTPFMPSFNSLLG 95
S + S+V + + Y E +SG V++ +DA+ F M +P P + F+ L
Sbjct: 22 SCYGRVFSSVSDGKGKVSY-RERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFS 80
Query: 96 ALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSP 155
+A K Y + L +++ G+ + +L+I++NC C+ +S AF A+G+I++ + P
Sbjct: 81 VVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEP 140
Query: 156 DVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVI---------------------- 193
D VT LI GLC++G+ +EA L + V +P +I
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 194 ---------PNVICYASII-----------------------------------DGLCKD 209
PN + Y ++ DGLCKD
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 210 GFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDA------------------- 250
G ++ LF +M+ +G D +Y +LIR +C A W+D
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 251 ---------KGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKEL 301
+G A ELH+E + + G+ PD ++Y S+I+ CK+ +DKA +
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMI----QRGI--SPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 302 FLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSK 361
M S+G P++ ++ LI+GYC IDD +LF + G + DT +YNTLI + +
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 362 IEKVEEALSLYGEMISMGVRP-------------DNSCILEAAELFRTLHNTKFELDLTV 408
+ K+E A L+ EM+S VRP DN +A E+F + +K ELD+ +
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 409 FNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDME 468
+N ++ G+C + ++ AW+LF LP G +P+V TY +MI GLC +G + +A L ME
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 469 E 469
E
Sbjct: 555 E 555
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 151/323 (46%), Gaps = 33/323 (10%)
Query: 118 LLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEAS 177
+ PD V+ + L++CF K + +A ++++ SPD VT LI G C + + +A+
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 178 GLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSL 237
+ V+ C PN+ + +I+G CK ++ LF M RG+ D YN+L
Sbjct: 373 HMLDLMVSKGCGPNIRT----FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 238 IRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDK 297
I+ +C G A EL +E V+ PD++SY +++ LC + +K
Sbjct: 429 IQGFC-------ELGKLEVAKELFQEMVSRR------VRPDIVSYKILLDGLCDNGEPEK 475
Query: 298 AKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLIN 357
A E+F ++ + D+ +Y+ +I G C ++DDA LF S+ +G PD +YN +I
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 358 SYSKIEKVEEALSLYGEMISMGVRPDNSCI--------------LEAAELFRTLHNTKFE 403
K + EA L+ +M G P N C ++A+L + F
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSP-NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Query: 404 LDLTVFNCLVDGLCKSWRLRSAW 426
+D + +VD L RL+ ++
Sbjct: 595 VDASTVKMVVDML-SDGRLKKSF 616
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 214/404 (52%), Gaps = 39/404 (9%)
Query: 66 VELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSL 125
++L+D+L F +M+ +P P + F+ LL A++ K Y I L E++ +G+ + +
Sbjct: 60 MKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119
Query: 126 NILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVA 185
NIL+NCFC+ +S A LG++++ P +VT G L+ G C + +A +F + V
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 186 FDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAV 245
+PNV+ Y +IIDGLCK V+ L M+ GI PD YNSLI C +
Sbjct: 180 MGYKPNVV----IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 246 NWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDM 305
W DA S + +PDV ++ ++I++ K+ V +A+E + +M
Sbjct: 236 RWSDATRMVSCMTKRE-------------IYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 306 KSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKV 365
R + PD+V YS LI G C+ R+D+A ++F + S+GC PD +Y+ LIN Y K +KV
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 366 EEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSA 425
E + L+ EM GV + NT + L+ G C++ +L A
Sbjct: 343 EHGMKLFCEMSQRGV----------------VRNT------VTYTILIQGYCRAGKLNVA 380
Query: 426 WELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE 469
E+F+++ G PN++TY V++ GLC G IEKA +L DM++
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 164/352 (46%), Gaps = 53/352 (15%)
Query: 70 DALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILM 129
DAL F+ M+ M P + +N+++ L K N + L R+ G+ PD V+ N L+
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 130 NCFC---------KMI----------------GVSDAFVALGRI----------LRKVFS 154
+ C +M+ + DA V GR+ +R+
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 155 PDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNK 214
PD+VT LI GLCM + EA +F V+ C P+V+ Y+ +I+G CK V
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC----FPDVVTYSILINGYCKSKKVEH 344
Query: 215 VRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVI 274
LF +M RG+ + Y LI+ YC A G + A E+ V GV
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRA-------GKLNVAEEIFRRMVF----CGV- 392
Query: 275 CHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDAR 334
HP++++Y +++ LC + ++KA + DM+ G+ D+V Y+ +I G C G + DA
Sbjct: 393 -HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 335 KLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSC 386
++ S+ +G +PD +Y T++ K EA +L+ +M G+ P N C
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP-NEC 502
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 31/236 (13%)
Query: 295 VDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNT 354
+D + +LF M +P + +S L+ M + D L+ ++ G + + N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 355 LINSYSKIEKVEEALSLYGEMISMGVRP---------DNSC----ILEAAELFRTLHNTK 401
L+N + + ++ ALS G+MI +G P + C + +A +F +
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 402 FELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAY 461
++ ++ ++N ++DGLCKS ++ +A +L ++ + G P+VVTY +I GLC G A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 462 DLLPDMEEK------------IRECLK------AIELLHKMAKRYVKPDEITVSIL 499
++ M ++ I C+K A E +M +R + PD +T S+L
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 231/477 (48%), Gaps = 77/477 (16%)
Query: 66 VELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSL 125
++ N+AL F +M+ +P P + F LL +A K + I L + L +G+ D +
Sbjct: 51 LQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 126 NILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVA 185
N+LMNCFC+ A LG++++ F PD+VT LI G C+ + EA + + V
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 186 FDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAV 245
+P+V+ Y +IID LCK+G VN LF M+ GI PD +Y SL+ C +
Sbjct: 171 MGIKPDVV----MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 246 NWEDA----KGNTSAALE--------LHEEFVNG----------NGELGVICHPDVLSYC 283
W DA +G T ++ L + FV N + + P++ +Y
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 284 SIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESE 343
S+IN C + VD+A+++F M+++G PDVV Y+SLI+G+C ++DDA K+F + +
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 344 GCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD-------------NSCILEA 390
G +T +Y TLI + ++ K A ++ M+S GV P+ N + +A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 391 AELFRTL-----------------------HNTKFELDLTVFNCL--------------- 412
+F + +N K E L VF +
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 413 VDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE 469
+ G+CK+ ++++A LF LP G +PNVVTYT MI GL EG +A+ L M+E
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 168/376 (44%), Gaps = 68/376 (18%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNF-ICLSERLNTIGLLPDFVSL 125
+ +A+ N M+ M P + + +++ +L K +VN+ + L +++ G+ PD V
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC-KNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 126 NILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVA 185
L+N C DA L + ++ PDV+T LI +GKF +A L+ + +
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI- 274
Query: 186 FDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAV 245
R ++ PN+ Y S+I+G C +G V++ R +F M+ +G +PD Y SLI +C
Sbjct: 275 ---RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK 331
Query: 246 NWEDA---------KGNTSAALELHEEFVNGNGELG-------VICH-------PDVLSY 282
+DA KG T + + + G G++G V H P++ +Y
Sbjct: 332 KVDDAMKIFYEMSQKGLTGNTIT-YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 283 CSIINSLCKDVLVDKAKELFLDMKSR---GIIPDVVVYSSL------------------- 320
+++ LC + V KA +F DM+ R G+ P++ Y+ L
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 321 ----------------IDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEK 364
I G C G++ +A LF S+ S+G P+ +Y T+I+ +
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510
Query: 365 VEEALSLYGEMISMGV 380
EA L+ +M GV
Sbjct: 511 KHEAHVLFRKMKEDGV 526
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 30/239 (12%)
Query: 281 SYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSI 340
+Y I+ + + ++A +LF M +P ++ ++ L++ M + D L +
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 341 ESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD---------NSCILEAA 391
+ G D + N L+N + + + A S G+M+ +G PD C+
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 392 ELFRTLHNTKFEL----DLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVM 447
E ++ N E+ D+ ++ ++D LCK+ + A LF ++ YG P+VV YT +
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 448 ICGLCIEGGIEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKD 506
+ GLC G + R+ A LL M KR +KPD IT + L + K+
Sbjct: 219 VNGLCNSG--------------RWRD---ADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 224/455 (49%), Gaps = 62/455 (13%)
Query: 60 NSKSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLL 119
++K + L + + F MI +P P + F+ +L +A K Y I L + G+
Sbjct: 42 STKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIG 101
Query: 120 PDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGL 179
D S NI++NC C+ A +G++++ + PDVVT+ LI G C + +A L
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 180 FTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIR 239
+K RP+V+ Y +IIDG CK G VN LF M+ G+ DA YNSL+
Sbjct: 162 VSKMEEMGFRPDVV----IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 240 VYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAK 299
CC+ W DA L + V + P+V+++ ++I+ K+ +A
Sbjct: 218 GLCCSGRWSDAA-------RLMRDMVMRD------IVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 300 ELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSY 359
+L+ +M R + PDV Y+SLI+G C+ GR+D+A+++ + ++GC+PD +YNTLIN +
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Query: 360 SKIEKVEEALSLYGEMISMGV------------------RPD------------------ 383
K ++V+E L+ EM G+ RPD
Sbjct: 325 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTY 384
Query: 384 ---------NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPR 434
N + +A LF + ++ ELD+T +N ++ G+CK + AW+LF+ L
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 435 YGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE 469
G +P+VV+YT MI G C + +K+ L M+E
Sbjct: 445 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 152/315 (48%), Gaps = 20/315 (6%)
Query: 68 LNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNI 127
+NDA+ F+ M ++NSL+ L + + L + ++P+ ++
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 128 LMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFD 187
+++ F K S+A + R+ PDV T LI GLCM G+ EA + V
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 188 CRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNW 247
C +P+V+ Y ++I+G CK V++ LF +M RG+ D YN++I+ Y A
Sbjct: 310 C----LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA--- 362
Query: 248 EDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKS 307
G AA E+ + P++ +Y ++ LC + V+KA LF +M+
Sbjct: 363 ----GRPDAAQEIFSRMDS---------RPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 308 RGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEE 367
I D+ Y+ +I G C +G ++DA LF S+ +G PD SY T+I+ + + + ++
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 368 ALSLYGEMISMGVRP 382
+ LY +M G+ P
Sbjct: 470 SDLLYRKMQEDGLLP 484
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 223/453 (49%), Gaps = 65/453 (14%)
Query: 66 VELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSL 125
+ DA F M+H QP P + F LL A A + Y I S+++ G+ D S
Sbjct: 50 IRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSF 109
Query: 126 NILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVA 185
IL++CFC+ +S A LG++++ + P +VT G L+ G C+ + +A L V
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV- 168
Query: 186 FDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAV 245
+ PNV+ Y ++IDGLCK+G +N L +M+ +G+ D YN+L+ C +
Sbjct: 169 ---KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 246 NWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDM 305
W DA ++ + +N PDV+++ ++I+ K +D+A+EL+ +M
Sbjct: 226 RWSDA---ARMLRDMMKRSIN----------PDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Query: 306 KSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKV 365
+ P+ V Y+S+I+G C+ GR+ DA+K F + S+GC P+ +YNTLI+ + K V
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332
Query: 366 EEALSLYGE-----------------------------------MISMGVRPD--NSCIL 388
+E + L+ M+S V PD CIL
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL 392
Query: 389 -----------EAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGP 437
A F + ++ + + +N ++ GLCK+ ++ AWELF +LP G
Sbjct: 393 LHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV 452
Query: 438 EPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
+P+ TYT+MI GLC G +A +L+ M+E+
Sbjct: 453 KPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 137/314 (43%), Gaps = 17/314 (5%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
ELN AL N M + ++N+LL L + + + + + PD V+
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
L++ F K + +A +++ P+ VT +I GLCM G+ +A F +
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
C PNV+ Y ++I G CK V++ LF M G D F YN+LI YC
Sbjct: 311 GC----FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC---- 362
Query: 247 WEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMK 306
G AL++ V+ PD++++C +++ LC + ++ A F DM+
Sbjct: 363 ---QVGKLRVALDIFCWMVSRR------VTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 307 SRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVE 366
+V Y+ +I G C +++ A +LF + EG PD +Y +I K
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Query: 367 EALSLYGEMISMGV 380
EA L M G+
Sbjct: 474 EADELIRRMKEEGI 487
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 165/577 (28%), Positives = 257/577 (44%), Gaps = 141/577 (24%)
Query: 41 SNSVSTVEEKTKLLKYLS---------ENSKSG--EVELNDALCFFNYMIHMQPTPFMPS 89
SN +E+ T LL Y S E ++G ++++NDA+ F MI +P P
Sbjct: 13 SNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPID 72
Query: 90 FNSLLGALAGKKYY-------------------------VNFICLSERL----------N 114
FN L A+A K Y +N C ++L
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 115 TIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFT 174
+G PD ++ + L+N FC VS+A + R++ PD+VT+ LI GLC++G+ +
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 175 EASGLFTKFVAFDCRP-------------------------------NVIPNVICYASII 203
EA L + V + +P N+ +V+ Y+ +I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 204 DGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDA------------- 250
D LCKDG + LF +M+ +GI D Y+SLI C W+D
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 251 ---------------KGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLV 295
+G A EL+ E + PD ++Y S+I+ CK+ +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRG------IAPDTITYNSLIDGFCKENCL 366
Query: 296 DKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTL 355
+A ++F M S+G PD+V YS LI+ YC R+DD +LF I S+G IP+T +YNTL
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 356 INSYSKIEKVEEALSLYGEMISMGVRP-------------DNSCILEAAELFRTLHNTKF 402
+ + + K+ A L+ EM+S GV P DN + +A E+F + ++
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 403 ELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYD 462
L + ++N ++ G+C + ++ AW LF L G +P+VVTY VMI GLC +G + +A
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA-- 544
Query: 463 LLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSIL 499
DM L KM + PD+ T +IL
Sbjct: 545 ---DM------------LFRKMKEDGCTPDDFTYNIL 566
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 159/370 (42%), Gaps = 44/370 (11%)
Query: 68 LNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNI 127
+DAL FN M + +++SL+G L + + + + ++PD V+ +
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 128 LMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFD 187
L++ F K + +A ++ + +PD +T LI G C + EA+ +F V+
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 188 CRPNV-------------------------------IPNVICYASIIDGLCKDGFVNKVR 216
C P++ IPN I Y +++ G C+ G +N +
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 217 VLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICH 276
LF +M RG+ P Y L+ C G + ALE+ E+ LG+
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLC-------DNGELNKALEIFEKMQKSRMTLGIGI- 492
Query: 277 PDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKL 336
Y II+ +C VD A LF + +G+ PDVV Y+ +I G C G + +A L
Sbjct: 493 -----YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 337 FVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRT 396
F ++ +GC PD +YN LI ++ + ++ L EM G D+S I ++
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Query: 397 LHNTKFELDL 406
K LD+
Sbjct: 608 RRLDKSFLDM 617
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 36/294 (12%)
Query: 270 ELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGR 329
EL I H D+ + +IN C+ + A + G PD + +S+L++G+CL GR
Sbjct: 97 ELNGIEH-DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 330 IDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD------ 383
+ +A L + PD + +TLIN +V EAL L M+ G +PD
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 384 ---------NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPR 434
NS + A +LFR + + + ++ ++D LCK A LF ++
Sbjct: 216 VLNRLCKSGNSAL--ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273
Query: 435 YGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK----------------IRE--CLK 476
G + +VVTY+ +I GLC +G + +L +M + ++E L+
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 477 AIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLLPSFLSRNQEESKLT 530
A EL ++M R + PD IT + L + K+ HE + +S+ E +T
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 101/255 (39%), Gaps = 40/255 (15%)
Query: 280 LSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVS 339
LSY + + D+ V+ A +LF M +P + ++ L + D
Sbjct: 36 LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95
Query: 340 IESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHN 399
+E G D + +IN Y + +K+ A S+ G +G PD
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDT--------------- 140
Query: 400 TKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEK 459
F+ LV+G C R+ A L ++ P++VT + +I GLC++G + +
Sbjct: 141 -------ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 460 AYDLLPDMEE------------------KIRECLKAIELLHKMAKRYVKPDEITVSILEE 501
A L+ M E K A++L KM +R +K + SI+ +
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 502 LLNKDENCHECMNLL 516
L KD + + ++L
Sbjct: 254 SLCKDGSFDDALSLF 268
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
ELN AL F M + T + +N ++ + + L L+ G+ PD V+ N
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRG 166
+++ CK +S+A + ++ +PD T LIR
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 101/506 (19%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVS 124
+++L+DA+ F M+ +P P + FN LL A+A K + I L E++ + ++ +
Sbjct: 63 DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYT 122
Query: 125 LNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFV 184
NIL+NCFC+ +S A LG++++ + P +VTL L+ G C + ++A L + V
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 185 AFDCRPNVI-------------------------------PNVICYASIIDGLCKDG--- 210
RP+ I PN++ Y +++GLCK G
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 211 ----FVNKVRV----------------------------LFLDMKGRGIYPDAFVYNSLI 238
+NK+ LF +M+ +GI P+ Y+SLI
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 239 RVYCCAVNWEDAKGNTSAALE--LHEEFVNGNGELGVICH-------------------- 276
C W DA S +E ++ V N +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 277 PDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKL 336
PD+ +Y S++N C +DKAK++F M S+ PDVV Y++LI G+C R++D +L
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 337 FVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD------------- 383
F + G + DT +Y TLI + A ++ +M+S GV PD
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 384 NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVT 443
N + +A E+F + ++ +LD+ ++ +++G+CK+ ++ W+LF L G +PNVVT
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542
Query: 444 YTVMICGLCIEGGIEKAYDLLPDMEE 469
Y MI GLC + +++AY LL M+E
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 191/393 (48%), Gaps = 45/393 (11%)
Query: 62 KSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPD 121
K G+ +L AL N M + + FN+++ +L ++ + + L + + T G+ P+
Sbjct: 237 KRGDTDL--ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 122 FVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFT 181
V+ + L++C C SDA L ++ K +P++VT LI +GKF EA L+
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 182 KFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVY 241
+ + ++ P++ Y S+++G C ++K + +F M + +PD YN+LI+ +
Sbjct: 355 DMI----KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 242 CCAVNWEDAK------------GNTSAALELHEE-FVNGNGE---------LGVICHPDV 279
C + ED G+T L + F +G+ + + PD+
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 280 LSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVS 339
++Y +++ LC + ++KA E+F M+ I D+ +Y+++I+G C G++DD LF S
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 340 IESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD----NSCI-------- 387
+ +G P+ +YNT+I+ ++EA +L +M G P+ N+ I
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 388 -LEAAELFRTLHNTKFELDLT----VFNCLVDG 415
+AEL R + + +F D + V N L DG
Sbjct: 591 KAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 31/249 (12%)
Query: 282 YCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIE 341
Y I+ + D+ +D A LF M +P +V ++ L+ M + D L ++
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 342 SEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP---------DNSC----IL 388
+ +YN LIN + + ++ AL+L G+M+ +G P + C I
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 389 EAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMI 448
+A L + + D F L+ GL + A L ++ + G +PN+VTY V++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 449 CGLCIEGGIEKAYDLLPDMEE------------------KIRECLKAIELLHKMAKRYVK 490
GLC G + A +LL ME K R A+ L +M + ++
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 491 PDEITVSIL 499
P+ +T S L
Sbjct: 293 PNVVTYSSL 301
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 221 bits (564), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 236/492 (47%), Gaps = 81/492 (16%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVS 124
E +++AL F YM+ T F+ + + L +++ IGL P ++
Sbjct: 189 EDRISEALALFGYMV---ETGFLEA-----------------VALFDQMVEIGLTPVVIT 228
Query: 125 LNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFV 184
N L+N C V +A + +++ K DVVT G ++ G+C G A L +K
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 185 AFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCA 244
++ P+V+ Y++IID LCKDG + + LF +M +GI P+ F YN +I +C
Sbjct: 289 ----ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 245 VNWEDAKGNTSAALE--LHEEFVNGNG------------ELGVICH--------PDVLSY 282
W DA+ +E ++ + + N E +C PD ++Y
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 283 CSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIES 342
S+I CK D AK +F M S PDVV ++++ID YC R+D+ +L I
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 343 EGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD-------------NSCILE 389
G + +T++YNTLI+ + +++ + A L+ EMIS GV PD N + E
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 390 AAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMIC 449
A ELF + +K +LD +N ++ G+CK ++ AW+LF LP +G EP+V TY VMI
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 450 GLCIEGGIEKAYDLLPDMEEK------------IRECLKA------IELLHKMAKRYVKP 491
G C + I A L M++ IR CLKA IEL+ +M
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 492 DEITVSILEELL 503
D T+ ++ +L+
Sbjct: 641 DAFTIKMVADLI 652
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 220/470 (46%), Gaps = 46/470 (9%)
Query: 23 NSKKPISLN-SENEPSSLHSNSVSTVEEKTKLLKYLSENSKSGEVELNDALCFFNYMIHM 81
NS++ I +E SL S + T E + LK S KS L+DA+ FF+YM+
Sbjct: 45 NSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKS----LDDAIDFFDYMVRS 100
Query: 82 QPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDA 141
+P N ++G I L ++ + + S NIL+ CFC +S +
Sbjct: 101 RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160
Query: 142 FVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVA---------FD--CRP 190
G++ + F PDVVT L+ GLC++ + +EA LF V FD
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220
Query: 191 NVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDA 250
+ P VI + ++I+GLC +G V + L M G+G++ D Y +++ C
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC-------K 273
Query: 251 KGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGI 310
G+T +AL L + + PDV+ Y +II+ LCKD A+ LF +M +GI
Sbjct: 274 MGDTKSALNLLSKMEETH------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 311 IPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALS 370
P+V Y+ +IDG+C GR DA++L + PD ++N LI++ K K+ EA
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 371 LYGEMISMGVRPD----NSCIL---------EAAELFRTLHNTKFELDLTVFNCLVDGLC 417
L EM+ + PD NS I +A +F + + D+ FN ++D C
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYC 443
Query: 418 KSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM 467
++ R+ +L +++ R G N TY +I G C + A DL +M
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/519 (28%), Positives = 236/519 (45%), Gaps = 127/519 (24%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVS 124
+++L+DA+ F M+ +P P + FN LL A+A + I L ER+ + + D S
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 125 LNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLC---------------- 168
NIL+NCFC+ + A LG++++ + PD+VTL L+ G C
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 169 -------------------MQGKFTEASGLFTKFVAFDCRPNVI---------------- 193
+ K +EA L + VA C+P++
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 194 ---------------PNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLI 238
+V+ Y +IID LC VN LF +M +GI P+ YNSLI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 239 RVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKA 298
R C W DA S +E +P+V+++ ++I++ K+ + +A
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERK-------------INPNVVTFSALIDAFVKEGKLVEA 344
Query: 299 KELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINS 358
++L+ +M R I PD+ YSSLI+G+C+ R+D+A+ +F + S+ C P+ +YNTLI
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 359 YSKIEKVEEALSLYGE-----------------------------------MISMGVRPD 383
+ K ++VEE + L+ E M+S GV PD
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 384 ---NSCILE----------AAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFK 430
S +L+ A +F L +K E D+ +N +++G+CK+ ++ W+LF
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 431 KLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE 469
L G +PNV+ YT MI G C +G E+A L +M+E
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 165/364 (45%), Gaps = 41/364 (11%)
Query: 68 LNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNI 127
+NDAL F M + P + ++NSL+ L + + L + + P+ V+ +
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 128 LMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFD 187
L++ F K + +A ++++ PD+ T LI G CM + EA +F ++ D
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 188 CRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNW 247
C PNV+ Y ++I G CK V + LF +M RG+ + YN+LI+ A +
Sbjct: 391 C----FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 248 EDAK----------------------------GNTSAALELHEEFVNGNGELGVICHPDV 279
+ A+ G AL + E E PD+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME------PDI 500
Query: 280 LSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVS 339
+Y +I +CK V+ +LF + +G+ P+V++Y+++I G+C G ++A LF
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 340 IESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHN 399
++ +G +P++ +YNTLI + + + L EM S G D S I + + LH+
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI---SMVINMLHD 617
Query: 400 TKFE 403
+ E
Sbjct: 618 GRLE 621
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 219 bits (558), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 237/525 (45%), Gaps = 127/525 (24%)
Query: 59 ENSKSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGL 118
N S ++++DA+ F M+ +P P + FN LL A+A + I L E++ T+G+
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 119 LPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLC---------- 168
D + +I +NCFC+ +S A L ++++ + PD+VTL L+ G C
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 169 -------------------------MQGKFTEASGLFTKFVAFDCRPNVI---------- 193
+ K +EA L + V C+P+++
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 194 ---------------------PNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAF 232
+V+ Y +IIDGLCK ++ LF +M +GI PD F
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 233 VYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKD 292
Y+SLI C W DA S +E +P+V+++ ++I++ K+
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERK-------------INPNVVTFSALIDAFVKE 341
Query: 293 VLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSY 352
+ +A++L+ +M R I PD+ YSSLI+G+C+ R+D+A+ +F + S+ C P+ +Y
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 353 NTLINSYSKIEKVEEALSLYGE-----------------------------------MIS 377
+TLI + K ++VEE + L+ E M+S
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 378 MGVRPD-------------NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRS 424
+GV P+ N + +A +F L + E D+ +N +++G+CK+ ++
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 425 AWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE 469
WELF L G PNV+ Y MI G C +G E+A LL M+E
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 162/343 (47%), Gaps = 26/343 (7%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
++DAL F M + P + +++SL+ L + + L + + P+ V+ +
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
L++ F K + +A ++++ PD+ T LI G CM + EA +F ++
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
DC PNV+ Y+++I G CK V + LF +M RG+ + Y +LI + A +
Sbjct: 393 DC----FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 247 WEDAKG--NTSAALELHEEFVNGNGELGVIC--------------------HPDVLSYCS 284
++A+ ++ +H + N L +C PD+ +Y
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 285 IINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEG 344
+I +CK V+ ELF ++ +G+ P+V+ Y+++I G+C G ++A L ++ +G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 345 CIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCI 387
+P++ +YNTLI + + E + L EM S G D S I
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 44/320 (13%)
Query: 69 NDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNIL 128
+DA + MI + P + +F++L+ A + V L + + + PD + + L
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 129 MNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTK------ 182
+N FC + +A ++ K P+VVT LI+G C + E LF +
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 183 --------------FVAFDC-----------RPNVIPNVICYASIIDGLCKDGFVNKVRV 217
F A DC V PN++ Y ++DGLCK+G + K V
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 218 LFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHP 277
+F ++ + PD + YN +I C A ED E F N + + GV P
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG----------WELFCNLSLK-GV--SP 536
Query: 278 DVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLF 337
+V++Y ++I+ C+ ++A L MK G +P+ Y++LI G + + +L
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELI 596
Query: 338 VSIESEGCIPDTSSYNTLIN 357
+ S G D S+ + N
Sbjct: 597 KEMRSCGFAGDASTIGLVTN 616
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 18/199 (9%)
Query: 47 VEEKTKLLKYLSENSKSGEV--------------ELNDALCFFNYMIHMQPTPFMPSFNS 92
VEE +L + +S+ G + ++A F M+ + P + ++N
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 93 LLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKV 152
LL L + + E L + PD + NI++ CK V D + + K
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 153 FSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFV 212
SP+V+ +I G C +G EA L K +PN Y ++I +DG
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMK----EDGPLPNSGTYNTLIRARLRDGDR 589
Query: 213 NKVRVLFLDMKGRGIYPDA 231
L +M+ G DA
Sbjct: 590 EASAELIKEMRSCGFAGDA 608
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 355 LINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHN-TKFEL--------- 404
L N S I KV++A+ L+G+M+ RP S I+E +L + KFEL
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVK--SRPFPS-IVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 405 ------DLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIE 458
DL ++ ++ C+ +L A + K+ + G EP++VT + ++ G C I
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 459 KAYDLLPDMEEK------------------IRECLKAIELLHKMAKRYVKPDEITVSILE 500
A L+ M E + +A+ L+ +M +R +PD +T +
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 501 ELLNKDENCHECMNLL 516
L K + ++LL
Sbjct: 231 NGLCKRGDIDLALSLL 246
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 219 bits (557), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 238/494 (48%), Gaps = 95/494 (19%)
Query: 57 LSENSKSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTI 116
LS N S E++L+DA+ F M+ +P P + F+ LL A+A + I L E++ +
Sbjct: 52 LSRNGLS-ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 117 GLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLC-------- 168
G+ + + +IL+NCFC+ + A LG++++ + P++VTL L+ G C
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 169 ---------------------------MQGKFTEASGLFTKFVAFDCRPNVI-------- 193
+ K +EA L + VA C+P+++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 194 -----------------------PNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPD 230
P V+ Y +IIDGLCK ++ LF +M+ +GI P+
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 231 AFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLC 290
Y+SLI C W DA S +E +PDV ++ ++I++
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERK-------------INPDVFTFSALIDAFV 337
Query: 291 KDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTS 350
K+ + +A++L+ +M R I P +V YSSLI+G+C+ R+D+A+++F + S+ C PD
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 351 SYNTLINSYSKIEKVEEALSLYGEM--------------ISMGVRPDNSCILEAAELFRT 396
+YNTLI + K ++VEE + ++ EM + G+ C + A E+F+
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM-AQEIFKE 456
Query: 397 LHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGG 456
+ + ++ +N L+DGLCK+ +L A +F+ L R EP + TY +MI G+C G
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 457 IEKAYDLLPDMEEK 470
+E +DL ++ K
Sbjct: 517 VEDGWDLFCNLSLK 530
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 172/353 (48%), Gaps = 40/353 (11%)
Query: 62 KSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPD 121
K G+ +L A N M + P + +N+++ L K+ + + L + + T G+ P+
Sbjct: 233 KRGDTDL--AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 122 FVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFT 181
V+ + L++C C SDA L ++ + +PDV T LI +GK EA L+
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 182 KFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVY 241
+ V + ++ P+++ Y+S+I+G C +++ + +F M + +PD YN+LI+ +
Sbjct: 351 EMV----KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 242 CCAVNWEDA----------------------------KGNTSAALELHEEFVNGNGELGV 273
C E+ G+ A E+ +E V+
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG----- 461
Query: 274 ICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDA 333
P++++Y ++++ LCK+ ++KA +F ++ + P + Y+ +I+G C G+++D
Sbjct: 462 -VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 334 RKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSC 386
LF ++ +G PD +YNT+I+ + + EEA +L+ EM G P++ C
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 37/303 (12%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLL----- 119
E +L +A ++ M+ P + +++SL +N C+ +RL+ +
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSL----------INGFCMHDRLDEAKQMFEFMV 388
Query: 120 -----PDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFT 174
PD V+ N L+ FCK V + + ++ + VT LI+GL G
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 175 EASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVY 234
A +F + V+ V PN++ Y +++DGLCK+G + K V+F ++ + P + Y
Sbjct: 449 MAQEIFKEMVS----DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 235 NSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVL 294
N +I C A ED + F N + + GV PDV++Y ++I+ C+
Sbjct: 505 NIMIEGMCKAGKVEDG----------WDLFCNLSLK-GV--KPDVVAYNTMISGFCRKGS 551
Query: 295 VDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNT 354
++A LF +MK G +P+ Y++LI G + + +L + S G D S+
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 611
Query: 355 LIN 357
+ N
Sbjct: 612 VTN 614
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 295 VDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNT 354
+D A LF +M P ++ +S L+ M + D L +++ G + +Y+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 355 LINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVD 414
LIN + + ++ AL++ G+M+ +G P+ + + L++
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPN----------------------IVTLSSLLN 159
Query: 415 GLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIREC 474
G C S R+ A L ++ G +PN VT+ +I GL + +
Sbjct: 160 GYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH-----------------NKA 202
Query: 475 LKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLL 516
+A+ L+ +M + +PD +T ++ L K + NLL
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/582 (26%), Positives = 256/582 (43%), Gaps = 157/582 (26%)
Query: 3 SSSPATSRTAFKVKPSSSLRNSKKPISLNSENEPSSLHSNSVSTVEEKTKLLKYLSENSK 62
++ P+ S +F V+ S +R + IS+N N+
Sbjct: 27 TAPPSFSHCSFWVRDFSGVRYDYRKISINRLND--------------------------- 59
Query: 63 SGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDF 122
++L+DA+ F M+ +P P + F+ LL A+A + I L E++ +G+ +
Sbjct: 60 ---LKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 123 VSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLC-------------- 168
+ +IL+NCFC+ +S A L ++++ + PD+VTL L+ G C
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 169 ----------------MQGKF-----TEASGLFTKFVAFDCRPNVI-------------- 193
+ G F +EA L + V C+P+++
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 194 -----------------PNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNS 236
P V+ Y +IID LC VN LF +M +GI P+ YNS
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 237 LIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVD 296
LIR C W DA S +E +P+V+++ ++I++ K+ +
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERK-------------INPNVVTFSALIDAFVKEGKLV 343
Query: 297 KAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLI 356
+A++L+ +M R I PD+ YSSLI+G+C+ R+D+A+ +F + S+ C P+ +YNTLI
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 357 NSYSKIEKVEEALSLYGE-----------------------------------MISMGVR 381
+ K ++V+E + L+ E M+S GV
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 382 PD-------------NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWEL 428
PD N + A +F L +K E D+ +N +++G+CK+ ++ W+L
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 429 FKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
F L G +PNVVTYT M+ G C +G E+A L +M+E+
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 38/348 (10%)
Query: 68 LNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNI 127
+NDAL F M + P + ++NSL+ L + + L + + P+ V+ +
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 128 LMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFD 187
L++ F K + +A ++++ PD+ T LI G CM + EA +F ++ D
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 188 CRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNW 247
C PNV+ Y ++I G CK V++ LF +M RG+ + Y +LI + A
Sbjct: 392 C----FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 248 EDAK----------------------------GNTSAALELHEEFVNGNGELGVICHPDV 279
++A+ G AL + E E PD+
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME------PDI 501
Query: 280 LSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVS 339
+Y +I +CK V+ +LF + +G+ P+VV Y++++ G+C G ++A LF
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 340 IESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCI 387
++ EG +PD+ +YNTLI ++ + + L EM S D S I
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 609
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 44/320 (13%)
Query: 69 NDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNIL 128
+DA + MI + P + +F++L+ A + V L + + + PD + + L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 129 MNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTK------ 182
+N FC + +A ++ K P+VVT LI+G C + E LF +
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 183 --------------FVAFDC-----------RPNVIPNVICYASIIDGLCKDGFVNKVRV 217
F A +C V+P+++ Y+ ++DGLC +G V V
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 218 LFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHP 277
+F ++ + PD + YN +I C A ED + +L L GV P
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG-WDLFCSLSLK----------GV--KP 534
Query: 278 DVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLF 337
+V++Y ++++ C+ L ++A LF +MK G +PD Y++LI + G + +L
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 338 VSIESEGCIPDTSSYNTLIN 357
+ S + D S+ + N
Sbjct: 595 REMRSCRFVGDASTIGLVTN 614
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 78/215 (36%), Gaps = 51/215 (23%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
E ++A F M+ P + +++ LL L + + E L + PD + N
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
I++ CK V D + + K P+VVT ++ G C +G EA LF
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR----- 560
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
+MK G PD+ YN+LIR +
Sbjct: 561 ----------------------------------EMKEEGPLPDSGTYNTLIRAHL---- 582
Query: 247 WEDAKGNTSAALELHEE-----FVNGNGELGVICH 276
G+ +A+ EL E FV +G++ +
Sbjct: 583 ---RDGDKAASAELIREMRSCRFVGDASTIGLVTN 614
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 214/452 (47%), Gaps = 47/452 (10%)
Query: 59 ENSKSG--EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTI 116
E +SG ++ NDAL F M P P + F+ LL A+A Y I L L +
Sbjct: 49 ERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEML 108
Query: 117 GLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEA 176
G+ D S L++CFC+ +S A LG++++ F P +VT G L+ G C +F EA
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 177 SGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNS 236
L + V PNV+ Y +IID LC+ G VN + MK GI PD YNS
Sbjct: 169 MSLVDQIVGLGYE----PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNS 224
Query: 237 LIRVYCCAVNWE-------------------------DAKGNTSAALELHEEFVNGNGEL 271
LI + W D G LE +++ N +
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY---NEMI 281
Query: 272 GVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRID 331
+P++++Y S+IN LC L+D+AK++ + S+G P+ V Y++LI+GYC R+D
Sbjct: 282 QRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVD 341
Query: 332 DARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP--------- 382
D K+ + +G DT +YNTL Y + K A + G M+S GV P
Sbjct: 342 DGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401
Query: 383 ----DNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPE 438
D+ I +A L +K + + +N ++ GLCK+ ++ AW LF L G
Sbjct: 402 DGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVS 461
Query: 439 PNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
P+V+TY M+ GL + +A++L M+++
Sbjct: 462 PDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 117/290 (40%), Gaps = 46/290 (15%)
Query: 251 KGNTSAALELHEEFVNGNGELGVICHPDVLS----YCSIINSLCKDVLVDKAKELFLDMK 306
KGN AL L IC+ S Y + S + + A LF DM
Sbjct: 24 KGNLVTALSLR------------ICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMA 71
Query: 307 SRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVE 366
+P +V +S L+ + + + LF +E G D S+ TLI+ + + ++
Sbjct: 72 ESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLS 131
Query: 367 EALSLYGEMISMGVRP---------DNSC----ILEAAELFRTLHNTKFELDLTVFNCLV 413
ALS G+M+ +G P + C EA L + +E ++ ++N ++
Sbjct: 132 LALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTII 191
Query: 414 DGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIRE 473
D LC+ ++ +A ++ K + + G P+VVTY +I L G + +L D
Sbjct: 192 DSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSD------- 244
Query: 474 CLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLLPSFLSRN 523
M + + PD IT S L ++ K+ E + R+
Sbjct: 245 ----------MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 228/478 (47%), Gaps = 92/478 (19%)
Query: 66 VELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSL 125
++L+DA+ F M+ +P P + FN LL A+A K + I L E++ +G+ + +
Sbjct: 64 MKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTY 123
Query: 126 NILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVA 185
NIL+NCFC+ +S A LG++++ + P +VTL L+ G C + ++A L + V
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 186 FDCRPNVI-------------------------------PNVICYASIIDGLCKDG---- 210
RP+ I PN++ Y +++GLCK G
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 211 ---FVNKVRV----------------------------LFLDMKGRGIYPDAFVYNSLIR 239
+NK+ LF +M+ +G+ P+ Y+SLI
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 240 VYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAK 299
C W DA S +E +P+V+++ ++I++ K+ + +A+
Sbjct: 304 CLCNYERWSDASRLLSDMIERK-------------INPNVVTFNALIDAFVKEGKLVEAE 350
Query: 300 ELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSY 359
+L+ +M R I PD+ YSSLI+G+C+ R+D+A+ +F + S+ C P+ +YNTLIN +
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 360 SKIEKVEEALSLYGEMISMGVRPDNSCIL-------------EAAELFRTLHNTKFELDL 406
K ++++E + L+ EM G+ + A +F+ + + ++
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 407 TVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLL 464
+N L+DGLCK+ +L A +F+ L R EP + TY +MI G+C G +E +DL
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 161/317 (50%), Gaps = 17/317 (5%)
Query: 69 NDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNIL 128
+DAL F M + P + +++SL+ L + + + L + + P+ V+ N L
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 129 MNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDC 188
++ F K + +A ++++ PD+ T LI G CM + EA +F ++ DC
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 189 RPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWE 248
PNV+ Y ++I+G CK +++ LF +M RG+ + Y +LI + A + +
Sbjct: 397 ----FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 249 DAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSR 308
+A+ + + +G HP++++Y ++++ LCK+ ++KA +F ++
Sbjct: 453 NAQ------MVFKQMVSDG-------VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 309 GIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEA 368
+ P + Y+ +I+G C G+++D LF S+ +G PD YNT+I+ + + EEA
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Query: 369 LSLYGEMISMGVRPDNS 385
+L+ +M G PD+
Sbjct: 560 DALFRKMREDGPLPDSG 576
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 282 YCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIE 341
Y I+ + + +D A LF M +P + ++ L+ M + D L ++
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 342 SEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP---------DNSC----IL 388
G + +YN LIN + + ++ AL+L G+M+ +G P + C I
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 389 EAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMI 448
+A L + + D F L+ GL + A L ++ + G +PN+VTY V++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 449 CGLCIEGGIEKAYDLLPDMEE------------------KIRECLKAIELLHKMAKRYVK 490
GLC G I+ A++LL ME K R A+ L +M + V+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 491 PDEITVSILEELLNKDENCHECMNLLPSFLSR 522
P+ IT S L L E + LL + R
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIER 324
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 226/499 (45%), Gaps = 113/499 (22%)
Query: 78 MIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIG 137
M+ +P P + FN LL A+A K + I L E++ +G+ + + NIL+NCFC+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 138 VSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVI---- 193
+S A LG++++ + P +VTL L+ G C + ++A L + V RP+ I
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 194 ---------------------------PNVICYASIIDGLCKDG-------FVNKVRV-- 217
PN++ Y +++GLCK G +NK+
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 218 --------------------------LFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDA- 250
LF +M+ +GI P+ Y+SLI C W DA
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 251 ---------------------------KGNTSAALELHEEFVNGNGELGVICHPDVLSYC 283
+G A +LH++ + + PD+ +Y
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS------IDPDIFTYN 294
Query: 284 SIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESE 343
S+IN C +DKAK++F M S+ PD+ Y++LI G+C R++D +LF +
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 344 GCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD-------------NSCILEA 390
G + DT +Y TLI + A ++ +M+S GV PD N + +A
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 391 AELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICG 450
E+F + ++ +LD+ ++ +++G+CK+ ++ W+LF L G +PNVVTY MI G
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Query: 451 LCIEGGIEKAYDLLPDMEE 469
LC + +++AY LL M+E
Sbjct: 475 LCSKRLLQEAYALLKKMKE 493
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 190/393 (48%), Gaps = 45/393 (11%)
Query: 62 KSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPD 121
K G+++L A N M + + FN+++ +L ++ + + L + + T G+ P+
Sbjct: 162 KRGDIDL--AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 122 FVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFT 181
V+ + L++C C SDA L ++ K +P++VT LI +GKF EA L
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 182 KFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVY 241
+ + ++ P++ Y S+I+G C ++K + +F M + +PD YN+LI+ +
Sbjct: 280 DMI----KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 242 CCAVNWEDAK------------GNTSAALELHEE-FVNGNGE---------LGVICHPDV 279
C + ED G+T L + F +G+ + + PD+
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 280 LSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVS 339
++Y +++ LC + ++KA E+F M+ I D+ +Y+++I+G C G++DD LF S
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 340 IESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD----NSCI-------- 387
+ +G P+ +YNT+I+ ++EA +L +M G PD N+ I
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 388 -LEAAELFRTLHNTKFELDLT----VFNCLVDG 415
+AEL R + + +F D + V N L DG
Sbjct: 516 KAASAELIREMRSCRFVGDASTIGLVANMLHDG 548
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 39/240 (16%)
Query: 277 PDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKL 336
P + + +++++ K D L M+ GI ++ Y+ LI+ +C +I A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 337 FVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRT 396
+ G P + ++L+N Y +++ +A++L +M+ MG RPD
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT------------ 115
Query: 397 LHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGG 456
F L+ GL + A L ++ + G +PN+VTY V++ GLC G
Sbjct: 116 ----------ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 457 IEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLL 516
I+ A++LL +KM ++ D + + + + L K + + +NL
Sbjct: 166 IDLAFNLL-----------------NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 238/519 (45%), Gaps = 127/519 (24%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVS 124
++L++A+ F M+ +P P + F+ LL A+A K + I E++ +G+ + +
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 125 LNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFV 184
NI++NC C+ +S A LG++++ + P +VTL L+ G C + +EA L + V
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 185 AFDCRPNVI-------------------------------PNVICYASIIDGLCKDG--- 210
+P+ + P+++ Y ++I+GLCK G
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 211 ----FVNKVRV----------------------------LFLDMKGRGIYPDAFVYNSLI 238
+NK+ LF +M +GI PD F Y+SLI
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 239 RVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKA 298
C W DA S LE +P+V+++ S+I++ K+ + +A
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERK-------------INPNVVTFNSLIDAFAKEGKLIEA 329
Query: 299 KELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINS 358
++LF +M R I P++V Y+SLI+G+C+ R+D+A+++F + S+ C+PD +YNTLIN
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 359 YSKIEKVEEALSL-----------------------------------YGEMISMGVRPD 383
+ K +KV + + L + +M+S GV P+
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 384 -------------NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFK 430
N + +A +F L +K E D+ +N + +G+CK+ ++ W+LF
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 431 KLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE 469
L G +P+V+ Y MI G C +G E+AY L M+E
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 180/363 (49%), Gaps = 30/363 (8%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
++DAL F M + P + +++SL+ L + + L + + P+ V+ N
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
L++ F K + +A ++++ P++VT LI G CM + EA +FT V+
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
DC +P+V+ Y ++I+G CK V LF DM RG+ + Y +LI + A +
Sbjct: 375 DC----LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 247 WEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMK 306
++A+ + + +G HP++++Y ++++ LCK+ ++KA +F ++
Sbjct: 431 CDNAQ------MVFKQMVSDG-------VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 307 SRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVE 366
+ PD+ Y+ + +G C G+++D LF S+ +G PD +YNT+I+ + K E
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 367 EALSLYGEMISMGVRPD----NSCI---------LEAAELFRTLHNTKFELDLTVFNCLV 413
EA +L+ +M G PD N+ I +AEL + + + +F D + + +
Sbjct: 538 EAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVT 597
Query: 414 DGL 416
D L
Sbjct: 598 DML 600
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 34/254 (13%)
Query: 280 LSYCSIINSLCKDVLV----DKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARK 335
LSY L ++ L+ D+A +LF +M P +V +S L+ M + D
Sbjct: 27 LSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS 86
Query: 336 LFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD----NSC----- 386
+E G + +YN +IN + ++ AL++ G+M+ +G P NS
Sbjct: 87 FGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFC 146
Query: 387 ----ILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVV 442
I EA L + ++ D F LV GL + + A L +++ G +P++V
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 443 TYTVMICGLCIEGGIEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSILEEL 502
TY +I GLC G PD+ A+ LL+KM K ++ D + S + +
Sbjct: 207 TYGAVINGLCKRGE--------PDL---------ALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 503 LNKDENCHECMNLL 516
L K + + +NL
Sbjct: 250 LCKYRHVDDALNLF 263
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 212 bits (539), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 247/541 (45%), Gaps = 130/541 (24%)
Query: 66 VELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSL 125
++ +DA+ F MI +P P + FN L A+A K Y + L +++ + G+ +L
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 126 NILMNCFCKMIGVSDAFVALGRILRKVFSPDVV--------------------------- 158
+I++NCFC+ +S AF +G+I++ + PD V
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 159 --------TLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIP-----NVIC------- 198
TL L+ GLC+ GK ++A L + V +PN + NV+C
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 199 -------------------YASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIR 239
Y+ IIDGLCKDG ++ LF +M+ +G D YN+LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 240 VYCCAVNWEDA----------------------------KGNTSAALELHEEFVNGNGEL 271
+C A W+D +G A +L +E + +
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM----QR 362
Query: 272 GVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRID 331
G+ P+ ++Y S+I+ CK+ +++A ++ M S+G PD++ ++ LI+GYC RID
Sbjct: 363 GI--APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 332 DARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP--------- 382
D +LF + G I +T +YNTL+ + + K+E A L+ EM+S VRP
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 383 ----DNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPE 438
DN + +A E+F + +K ELD+ ++ ++ G+C + ++ AW+LF LP G +
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 439 PNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSI 498
+ Y +MI LC + + KA D+ L KM + PDE+T +I
Sbjct: 541 LDARAYNIMISELCRKDSLSKA-DI----------------LFRKMTEEGHAPDELTYNI 583
Query: 499 L 499
L
Sbjct: 584 L 584
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 136/319 (42%), Gaps = 17/319 (5%)
Query: 69 NDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNIL 128
+D MI + +P + +F+ L+ + + L + + G+ P+ ++ N L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 129 MNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDC 188
++ FCK + +A + ++ K PD++T LI G C + + LF +
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL--- 431
Query: 189 RPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWE 248
VI N + Y +++ G C+ G + + LF +M R + PD Y L+ C
Sbjct: 432 -RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC------ 484
Query: 249 DAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSR 308
G ALE+ + EL D+ Y II+ +C VD A +LF + +
Sbjct: 485 -DNGELEKALEIFGKIEKSKMEL------DIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 309 GIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEA 368
G+ D Y+ +I C + A LF + EG PD +YN LI ++ + A
Sbjct: 538 GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTA 597
Query: 369 LSLYGEMISMGVRPDNSCI 387
L EM S G D S +
Sbjct: 598 AELIEEMKSSGFPADVSTV 616
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 108/255 (42%), Gaps = 40/255 (15%)
Query: 280 LSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVS 339
LSY ++S + D A +LF DM +P V+ ++ L + + L
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 340 IESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHN 399
+ES+G + + +IN + + K+ A S G+++ +G PD
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDT--------------- 158
Query: 400 TKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEK 459
+FN L++GLC R+ A EL ++ G +P ++T ++ GLC+ G +
Sbjct: 159 -------VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211
Query: 460 AYDLLPDMEE------------------KIRECLKAIELLHKMAKRYVKPDEITVSILEE 501
A L+ M E K + A+ELL KM +R +K D + SI+ +
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 502 LLNKDENCHECMNLL 516
L KD + NL
Sbjct: 272 GLCKDGSLDNAFNLF 286
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 213/439 (48%), Gaps = 39/439 (8%)
Query: 66 VELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSL 125
++ NDAL F M+H +P P + F LL +A Y I L E++ +G+ P +
Sbjct: 62 LQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTC 121
Query: 126 NILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVA 185
NI+M+C C A LG++++ F PD+VT L+ G C + +A LF + +
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 186 FDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAV 245
+PNV+ Y ++I LCK+ +N LF M G P+ YN+L+ C
Sbjct: 182 MGFKPNVVT----YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237
Query: 246 NWEDA------------KGNTSAALELHEEFVN----------GNGELGVICHPDVLSYC 283
W DA + N L + FV N + + +PDV +Y
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 284 SIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESE 343
S+IN LC L+D+A+++F M+ G P+ V+Y++LI G+C R++D K+F + +
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 344 GCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD-------------NSCILEA 390
G + +T +Y LI Y + + + A ++ +M S PD N + +A
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Query: 391 AELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICG 450
+F + + ++++ + ++ G+CK ++ A++LF L G +PNV+TYT MI G
Sbjct: 418 LMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 451 LCIEGGIEKAYDLLPDMEE 469
C G I +A L M+E
Sbjct: 478 FCRRGLIHEADSLFKKMKE 496
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 168/343 (48%), Gaps = 30/343 (8%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
+ DA+ F+ ++ M P + ++ +L+ L ++ + + L ++ T G P+ V+ N
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
L+ C++ DA L ++++ P+V+T LI GK EA L+ +
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
+V P+V Y S+I+GLC G +++ R +F M+ G YP+ +Y +LI +C +
Sbjct: 288 ----SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 247 WEDA---------KGNTSAAL---------------ELHEEFVNGNGELGVICHPDVLSY 282
ED KG + + ++ +E N PD+ +Y
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA--PPDIRTY 401
Query: 283 CSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIES 342
+++ LC + V+KA +F M+ R + ++V Y+ +I G C +G+++DA LF S+ S
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 343 EGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNS 385
+G P+ +Y T+I+ + + + EA SL+ +M G P+ S
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNES 504
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 31/250 (12%)
Query: 281 SYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSI 340
SY I+ + ++ + A +LF M +P ++ ++ L+ M R D LF +
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 341 ESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD---------NSC----I 387
+ G P + N +++ + A G+M+ +G PD C I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 388 LEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVM 447
+A LF + F+ ++ + L+ LCK+ L A ELF ++ G PNVVTY +
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 448 ICGLCIEGGIEKAYDLLPDMEE------------------KIRECLKAIELLHKMAKRYV 489
+ GLC G A LL DM + K+ + ++A EL + M + V
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 490 KPDEITVSIL 499
PD T L
Sbjct: 290 YPDVFTYGSL 299
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/590 (24%), Positives = 266/590 (45%), Gaps = 148/590 (25%)
Query: 59 ENSKSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGL 118
N S ++++DA+ F M+ +P P + FN LL A+A + I L E++ T+G+
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 119 LPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASG 178
D + +I +NCFC+ +S A L ++++ + PD+VTL L+ G C + ++A
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 179 LFTKFVAFDCRPNVI-------------------------------PNVICYASIIDGLC 207
L + V +P+ P+++ Y ++++GLC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 208 KDG-------FVNKVRV----------------------------LFLDMKGRGIYPDAF 232
K G +NK+ LF +M+ +GI P+
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 233 VYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKD 292
YNSLI C W DA S LE +P+V+++ ++I++ K+
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKK-------------INPNVVTFNALIDAFFKE 341
Query: 293 VLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSY 352
+ +A++L +M R I PD + Y+ LI+G+C+ R+D+A+++F + S+ C+P+ +Y
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 353 NTLINSYSKIEKVEEALSLYGEMISMGVRPDN---SCILE-------------------- 389
NTLIN + K ++VE+ + L+ EM G+ + + I++
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 390 -------------------------AAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRS 424
A +F+ L ++ EL++ ++N +++G+CK+ ++
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 425 AWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE--------------- 469
AW+LF L +P+VVTY MI GLC + +++A DL M+E
Sbjct: 522 AWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 470 -KIRECLKA--IELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLL 516
+R+C +A EL+ +M D T+S++ +L+ +N+L
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSFLNML 628
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 228/485 (47%), Gaps = 93/485 (19%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALA-----------GKKY----------- 102
+++L+DA+ F M+ +P P + F+ LL A+A G++
Sbjct: 53 DLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 112
Query: 103 ---YVNFICLSERLN----------TIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRIL 149
++N+ C +L+ +G P V+LN L+N FC +S+A + +++
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 150 RKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVI---------------- 193
+ PD VT L+ GL K +EA L + V C+P+++
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 194 ---------------PNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLI 238
+V+ Y +IIDGLCK ++ LF M+ +GI PD F YN LI
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 239 RVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKA 298
C W DA S LE + +PD++ + ++I++ K+ + +A
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKN-------------INPDLVFFNALIDAFVKEGKLVEA 339
Query: 299 KELFLDM-KSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLIN 357
++L+ +M KS+ PDVV Y++LI G+C R+++ ++F + G + +T +Y TLI+
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 358 SYSKIEKVEEALSLYGEMISMGVRPD-------------NSCILEAAELFRTLHNTKFEL 404
+ + + A ++ +M+S GV PD N + A +F + +L
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 405 DLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLL 464
D+ + +++ LCK+ ++ W+LF L G +PNVVTYT M+ G C +G E+A L
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 465 PDMEE 469
+M+E
Sbjct: 520 VEMKE 524
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 170/348 (48%), Gaps = 31/348 (8%)
Query: 62 KSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPD 121
K GE +L AL N M + + +N+++ L K+ + L ++ T G+ PD
Sbjct: 227 KRGEPDL--ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 122 FVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFT 181
+ N L++C C SDA L +L K +PD+V LI +GK EA L+
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 182 KFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVY 241
+ V + P+V+ Y ++I G CK V + +F +M RG+ + Y +LI +
Sbjct: 345 EMVK---SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 242 CCAVNWEDAKGNTSAALE--LHEEFV-----------NGNGELGVICHP---------DV 279
A + ++A+ + +H + + NGN E ++ D+
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 280 LSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVS 339
++Y ++I +LCK V+ +LF + +G+ P+VV Y++++ G+C G ++A LFV
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 340 IESEGCIPDTSSYNTLINSYSKIEKVEEALS--LYGEMISMGVRPDNS 385
++ +G +P++ +YNTLI +++ +EA S L EM S G D S
Sbjct: 522 MKEDGPLPNSGTYNTLIR--ARLRDGDEAASAELIKEMRSCGFAGDAS 567
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 139/358 (38%), Gaps = 71/358 (19%)
Query: 167 LCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRG 226
LC + F AS + DCR N+ V+ + D + LF DM
Sbjct: 28 LCWERSFAGAS-------SDDCRENLSRKVLQDLKLDDAIG----------LFGDMVKSR 70
Query: 227 IYPDAFVYNSLIRVYCCAVNWEDAKGNT-SAALELHEEFVNGNGELGVICHPDVLSYCSI 285
+P ++ L+ AK N + L E+ N LG I H ++ +Y
Sbjct: 71 PFPSIVEFSKLLSAI--------AKMNKFDLVISLGEQMQN----LG-ISH-NLYTYSIF 116
Query: 286 INSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGC 345
IN C+ + A + M G P +V +SL++G+C RI +A L + G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 346 IPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELD 405
PDT ++ TL++ + K EA++L M+ G +PD
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD---------------------- 214
Query: 406 LTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLP 465
L + +++GLCK A L K+ + E +VV Y +I GLC ++ A+DL
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274
Query: 466 DMEEKIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLLPSFLSRN 523
ME K +KPD T + L L + LL L +N
Sbjct: 275 KMETK-----------------GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 217/418 (51%), Gaps = 30/418 (7%)
Query: 66 VELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSL 125
++ +DA F M+ +P P + F +L +A + I L ++ +G+ D S
Sbjct: 58 IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117
Query: 126 NILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVA 185
IL++CFC+ +S A LG++++ F P +VTLG L+ G C +F EA L
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 186 FDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAV 245
F +PNV+ Y ++I+GLCK+ +N +F M+ +GI DA YN+LI +
Sbjct: 178 F----GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 246 NWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDM 305
W DA L + V + P+V+ + ++I++ K+ + +A+ L+ +M
Sbjct: 234 RWTDAA-------RLLRDMVKRKID------PNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 306 KSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKV 365
R ++P+V Y+SLI+G+C+ G + DA+ +F + S+GC PD +YNTLI + K ++V
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 366 EEALSLYGEMISMGVRPD----NSCILE---------AAELFRTLHNTKFELDLTVFNCL 412
E+ + L+ EM G+ D N+ I A ++F + + D+ +N L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 413 VDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
+D LC + ++ A + + L + + +++TY ++I GLC +++A+ L + K
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 458
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 153/341 (44%), Gaps = 26/341 (7%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
+LN+AL F M ++N+L+ L+ + + L + + P+ +
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
L++ F K + +A ++R+ P+V T LI G C+ G +A +F V+
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
C P+V+ Y ++I G CK V LF +M +G+ DAF YN+LI YC A
Sbjct: 319 GC----FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA-- 372
Query: 247 WEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMK 306
L + ++ N + GV PD+++Y +++ LC + ++KA + D++
Sbjct: 373 ---------GKLNVAQKVFNRMVDCGV--SPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 307 SRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVE 366
+ D++ Y+ +I G C ++ +A LF S+ +G PD +Y T+I+ +
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 367 EALSLYGEMISMGVRPDNSCILE---------AAELFRTLH 398
EA L M G P E +AEL + H
Sbjct: 482 EADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKAAH 522
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 30/241 (12%)
Query: 296 DKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTL 355
D A LF +M IP +V ++ ++ M + D L+ +E+ G D S+ L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 356 INSYSKIEKVEEALSLYGEMISMGVRP-------------DNSCILEAAELFRTLHNTKF 402
I+ + + ++ AL+L G+M+ +G RP + EA L ++ F
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 403 ELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYD 462
++ ++N +++GLCK+ L +A E+F + + G + VTY +I GL G A
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 463 LLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLLPSFLSR 522
LL D M KR + P+ I + L + K+ N E NL + R
Sbjct: 241 LLRD-----------------MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 523 N 523
+
Sbjct: 284 S 284
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 223/470 (47%), Gaps = 92/470 (19%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVS 124
++EL+DA+ F M +P P + F+ LL A+A + I E++ +G+ + +
Sbjct: 56 DIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115
Query: 125 LNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFV 184
NIL+NCFC+ +S A LG++++ + PD+VTL L+ G C + ++A L + V
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 185 AFDCRPNVI-------------------------------PNVICYASIIDGLCKDG--- 210
+P+ + P+++ Y ++++GLCK G
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 211 ----FVNKVRV----------------------------LFLDMKGRGIYPDAFVYNSLI 238
+NK+ LF +M+ +G+ P+ Y+SLI
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 239 RVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKA 298
C W DA S +E +P+++++ ++I++ K + KA
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERK-------------INPNLVTFSALIDAFVKKGKLVKA 342
Query: 299 KELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINS 358
++L+ +M R I P++ YSSLI+G+C++ R+ +A+++ + + C+P+ +YNTLIN
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 359 YSKIEKVEEALSLYGEMISMGVRPDNSCIL-------------EAAELFRTLHNTKFELD 405
+ K ++V++ + L+ EM G+ + A +F+ + + +
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 406 LTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEG 455
+ +N L+DGLCK+ +L A +F+ L R EP++ TY +MI G+C G
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 31/249 (12%)
Query: 282 YCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIE 341
Y ++ + D+ +D A LF M P ++ +S L+ M + D +E
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 342 SEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD----NSC---------IL 388
G + +YN LIN + + ++ AL+L G+M+ +G PD NS I
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 389 EAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMI 448
+A L + ++ D F L+ GL + A L ++ + G +P++VTY ++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 449 CGLCIEGGIEKAYDLLPDMEE------------------KIRECLKAIELLHKMAKRYVK 490
GLC G + A +LL ME K R A+ L +M + V+
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 491 PDEITVSIL 499
P+ IT S L
Sbjct: 286 PNVITYSSL 294
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 204/445 (45%), Gaps = 75/445 (16%)
Query: 117 GLLPDFVSLNILMNCFCK-MIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTE 175
G +P +S N +++ + +S A +L SP+V T LIRG C G
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 176 ASGLFTKFVAFDCRPNVI-------------------------------PNVICYASIID 204
A LF K C PNV+ PN+I Y +I+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 205 GLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEF 264
GLC++G + +V + +M RG D YN+LI+ YC +GN AL +H E
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC-------KEGNFHQALVMHAEM 336
Query: 265 VNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGY 324
+ P V++Y S+I+S+CK +++A E M+ RG+ P+ Y++L+DG+
Sbjct: 337 LRHG------LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 325 CLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD- 383
G +++A ++ + G P +YN LIN + K+E+A+++ +M G+ PD
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 384 --NSCIL----------EAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKK 431
S +L EA + R + + D ++ L+ G C+ R + A +L+++
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 432 LPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKP 491
+ R G P+ TYT +I C+EG +E KA++L ++M ++ V P
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLE-----------------KALQLHNEMVEKGVLP 553
Query: 492 DEITVSILEELLNKDENCHECMNLL 516
D +T S+L LNK E LL
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLL 578
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 185/413 (44%), Gaps = 49/413 (11%)
Query: 85 PFMPSFNSLLGAL--AGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAF 142
P + S+N ++ L G+ V+F+ L+E +N G D V+ N L+ +CK A
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFV-LTE-MNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 143 VALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASI 202
V +LR +P V+T LI +C G A + + PN Y ++
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV----RGLCPNERTYTTL 386
Query: 203 IDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHE 262
+DG + G++N+ + +M G P YN+LI +C EDA A LE +
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA----IAVLEDMK 442
Query: 263 EFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLID 322
E G PDV+SY ++++ C+ VD+A + +M +GI PD + YSSLI
Sbjct: 443 E----KG-----LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 323 GYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP 382
G+C R +A L+ + G PD +Y LIN+Y +E+AL L+ EM+ GV P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 383 D-------------NSCILEAAE-LFRTLHNTKFELDLT----VFNC----------LVD 414
D S EA L + + D+T + NC L+
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 415 GLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM 467
G C + A ++F+ + +P+ Y +MI G C G I KAY L +M
Sbjct: 614 GFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 150/327 (45%), Gaps = 32/327 (9%)
Query: 68 LNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNI 127
+N A+ F + M P ++ +L+ + K Y + +N G P V+ N
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 128 LMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFD 187
L+N C + DA L + K SPDVV+ ++ G C EA + + V
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV--- 477
Query: 188 CRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNW 247
+ P+ I Y+S+I G C+ + L+ +M G+ PD F Y +LI YC
Sbjct: 478 -EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC----- 531
Query: 248 EDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKS 307
+G+ AL+LH E V E GV+ PDV++Y +IN L K +AK L L +
Sbjct: 532 --MEGDLEKALQLHNEMV----EKGVL--PDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 308 RGIIPDVVVYS---------------SLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSY 352
+P V Y SLI G+C+ G + +A ++F S+ + PD ++Y
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 353 NTLINSYSKIEKVEEALSLYGEMISMG 379
N +I+ + + + +A +LY EM+ G
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 40/277 (14%)
Query: 197 ICYA--SIIDGLCKD----GFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDA 250
+CY+ S+ D + K ++K + + G P YN+++ +
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATI------RS 182
Query: 251 KGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGI 310
K N S A + +E + P+V +Y +I C +D A LF M+++G
Sbjct: 183 KRNISFAENVFKEMLESQ------VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGC 236
Query: 311 IPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALS 370
+P+VV Y++LIDGYC + +IDD KL S+ +G P+ SYN +IN + +++E
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296
Query: 371 LYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFK 430
+ EM G + LD +N L+ G CK A +
Sbjct: 297 VLTEMNRRG----------------------YSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 431 KLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM 467
++ R+G P+V+TYT +I +C G + +A + L M
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 24/293 (8%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
++++AL M+ P +++SL+ ++ L E + +GL PD +
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
L+N +C + A ++ K PDVVT LI GL Q + EA L K
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 187 DCRPN------VIPN-----VICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYN 235
+ P+ +I N S+I G C G + + +F M G+ PD YN
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644
Query: 236 SLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLV 295
+I +C A G+ A L++E V G + H ++ +++ +L K+ V
Sbjct: 645 IMIHGHCRA-------GDIRKAYTLYKEMVKS----GFLLH--TVTVIALVKALHKEGKV 691
Query: 296 DKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPD 348
++ + + + + + L++ G +D + + +G +P+
Sbjct: 692 NELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 42/259 (16%)
Query: 306 KSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIES--EGCIPDTSSYNTLINSYSKIE 363
K+ I+ + V +L D Y A +F S++ + C +S ++ ++ SYS++
Sbjct: 97 KTAQILAEDVAAKTLDDEY--------ASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLS 148
Query: 364 KVEEALSLYGEMISMGVRP---DNSCILEAA-----------ELFRTLHNTKFELDLTVF 409
+++ALS+ + G P + +L+A +F+ + ++ ++ +
Sbjct: 149 LIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTY 208
Query: 410 NCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE 469
N L+ G C + + A LF K+ G PNVVTY +I G C I+ + LL M
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 470 KIRE-------------C----LKAIE-LLHKMAKRYVKPDEITVSILEELLNKDENCHE 511
K E C +K + +L +M +R DE+T + L + K+ N H+
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 512 CMNLLPSFLSRNQEESKLT 530
+ + L S +T
Sbjct: 329 ALVMHAEMLRHGLTPSVIT 347
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 212/449 (47%), Gaps = 48/449 (10%)
Query: 66 VELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNT---IGLLPDF 122
++ +DA F M + P P + FN +L A+A + Y I L +R+ I + PD
Sbjct: 64 IKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDL 123
Query: 123 VSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTK 182
+ NIL+NCFC+ S A LG++++ PD+VT L+ G C+ +A + +
Sbjct: 124 YTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQ 183
Query: 183 FVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYC 242
+ +V+ + I +ID LCK+ V + MK RGI P+ Y+SLI C
Sbjct: 184 MEKMGIKRDVVVDTI----LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLC 239
Query: 243 CAVNWEDAKGNTSAALELHEEFVNGN--------------GELGVI-----------CHP 277
+ DA+ E+ + +N N G+L + P
Sbjct: 240 KSGRLADAERRLH---EMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDP 296
Query: 278 DVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLF 337
+V +Y S+I LC VD+A ++ M S+G P+VV YS+L +G+ R+DD KL
Sbjct: 297 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLL 356
Query: 338 VSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD-------------N 384
+ G +T S NTLI Y + K++ AL ++G M S G+ P+ N
Sbjct: 357 DDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFAN 416
Query: 385 SCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTY 444
+ +A F + T+ +LD+ + ++ G+CK+ ++ A++LF KL EP+ Y
Sbjct: 417 GEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAY 476
Query: 445 TVMICGLCIEGGIEKAYDLLPDMEEKIRE 473
T+MI L G +A L ++ +R+
Sbjct: 477 TIMIAELNRAGMRTEADALNRFYQKHVRQ 505
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 37/189 (19%)
Query: 329 RIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCIL 388
+ DDA LFV + +P +N ++ + +K++ +Y +I++ R +N+ +
Sbjct: 65 KFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQ-------MYDVVINLWKRIENAEGI 117
Query: 389 EAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMI 448
E + DL N LV+ C+ ++ SA K+ + G EP++VT + ++
Sbjct: 118 EISP------------DLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLV 165
Query: 449 CGLCIEGGIEKAYDLLPDMEE------------------KIRECLKAIELLHKMAKRYVK 490
G C+ I+ A + ME+ K R + A+E+L +M R +
Sbjct: 166 NGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGIS 225
Query: 491 PDEITVSIL 499
P+ +T S L
Sbjct: 226 PNVVTYSSL 234
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 195/426 (45%), Gaps = 74/426 (17%)
Query: 120 PDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGL 179
PD + N L+N FCKM + DA L R+ K FSPD VT +I LC +GK A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 180 FTKFVAFDCRPNVI-------------------------------PNVICYASIIDGLCK 208
+ ++ +C+P VI P++ Y +II G+CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 209 DGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGN 268
+G V++ + +++ +G PD YN L+R WE+ + +
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK------- 328
Query: 269 GELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMG 328
C P+V++Y +I +LC+D +++A L MK +G+ PD Y LI +C G
Sbjct: 329 ------CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 329 RIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDN---- 384
R+D A + ++ S+GC+PD +YNT++ + K K ++AL ++G++ +G P++
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 385 ---SCILEAAELFRTLH------NTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRY 435
S + + + R LH + + D +N ++ LC+ + A+EL +
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Query: 436 GPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDEIT 495
P+VVTY +++ G C IE AI +L M +P+E T
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIE-----------------DAINVLESMVGNGCRPNETT 545
Query: 496 VSILEE 501
++L E
Sbjct: 546 YTVLIE 551
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 180/415 (43%), Gaps = 49/415 (11%)
Query: 133 CKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNV 192
C+ ++ L ++RK ++PDV+ LI+G +A + F
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ---- 155
Query: 193 IPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKG 252
P+V Y ++I+G CK ++ + M+ + PD YN +I C ++G
Sbjct: 156 -PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC-------SRG 207
Query: 253 NTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIP 312
AL++ + ++ N C P V++Y +I + + VD+A +L +M SRG+ P
Sbjct: 208 KLDLALKVLNQLLSDN------CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 261
Query: 313 DVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLY 372
D+ Y+++I G C G +D A ++ ++E +GC PD SYN L+ + K EE L
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 373 GEMISMGVRPD-------------NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKS 419
+M S P+ + I EA L + + D ++ L+ C+
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381
Query: 420 WRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE---------- 469
RL A E + + G P++V Y ++ LC G ++A ++ + E
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 470 --------KIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLL 516
+ ++A+ ++ +M + PDEIT + + L ++ E LL
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 151/316 (47%), Gaps = 25/316 (7%)
Query: 85 PFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVA 144
P + S+N LL AL + + L ++ + P+ V+ +IL+ C+ + +A
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 145 LGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIID 204
L + K +PD + LI C +G+ A ++ C +P+++ Y +++
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC----LPDIVNYNTVLA 411
Query: 205 GLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEF 264
LCK+G ++ +F + G P++ YN++ W + G+ AL + E
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL-----W--SSGDKIRALHMILEM 464
Query: 265 VNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGY 324
++ NG PD ++Y S+I+ LC++ +VD+A EL +DM+S P VV Y+ ++ G+
Sbjct: 465 MS-NG-----IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 325 CLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDN 384
C RI+DA + S+ GC P+ ++Y LI EA+ L +++ + +
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEY 578
Query: 385 SCILEAAELFRTLHNT 400
S F+ LH T
Sbjct: 579 S--------FKRLHRT 586
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 64/279 (22%)
Query: 285 IINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYS-------------------------- 318
I + C+ ++ L M +G PDV++ +
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 319 --------SLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALS 370
+LI+G+C M RIDDA ++ + S+ PDT +YN +I S K++ AL
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 371 LYGEMISMGVRPD-------------NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLC 417
+ +++S +P + EA +L + + + D+ +N ++ G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 418 KSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIRECLKA 477
K + A+E+ + L G EP+V++Y +++ L +G E+ EK
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG--------EK------- 319
Query: 478 IELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLL 516
L+ KM P+ +T SIL L +D E MNLL
Sbjct: 320 --LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 53 LLKYLSENSKSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSER 112
+L L +N K+ + AL F + + +P S+N++ AL + + +
Sbjct: 409 VLATLCKNGKA-----DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 113 LNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGK 172
+ + G+ PD ++ N +++C C+ V +AF L + F P VVT ++ G C +
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 173 FTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGF 211
+A + V CR PN Y +I+G+ G+
Sbjct: 524 IEDAINVLESMVGNGCR----PNETTYTVLIEGIGFAGY 558
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 141/563 (25%), Positives = 247/563 (43%), Gaps = 101/563 (17%)
Query: 11 TAFKVKPSSSLRNSKKPISLNS--ENEPSSLHSNSVST--VEEKTKLLKYLSENSKSGEV 66
A KV+ S ++K +L+S N + H +SV++ E + +L + ++GE+
Sbjct: 59 AASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGEL 118
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
E + F M++ P + +L+ + E L G +PD ++ N
Sbjct: 119 E--EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
++++ +CK +++A L R+ SPDVVT ++R LC GK +A + + +
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 187 DCRPNVI-------------------------------PNVICYASIIDGLCKDGFVNKV 215
DC P+VI P+V+ Y +++G+CK+G +++
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 216 RVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDA---------KGNTSAALELH--EEF 264
DM G P+ +N ++R C W DA KG + + + + F
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 265 VNGNGELGVI-----------CHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPD 313
+ G LG C P+ LSY +++ CK+ +D+A E M SRG PD
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 314 VVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYG 373
+V Y++++ C G+++DA ++ + S+GC P +YNT+I+ +K K +A+ L
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 374 EMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLP 433
EM + ++PD ++ LV GL + ++ A + F +
Sbjct: 474 EMRAKDLKPDT----------------------ITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 434 RYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDE 493
R G PN VT+ ++ GLC K R+ +AI+ L M R KP+E
Sbjct: 512 RMGIRPNAVTFNSIMLGLC-----------------KSRQTDRAIDFLVFMINRGCKPNE 554
Query: 494 ITVSILEELLNKDENCHECMNLL 516
+ +IL E L + E + LL
Sbjct: 555 TSYTILIEGLAYEGMAKEALELL 577
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 167/368 (45%), Gaps = 59/368 (16%)
Query: 155 PDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNK 214
PD++ LIRG C GK +A+ + +P+VI Y +I G CK G +N
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEG----SGAVPDVITYNVMISGYCKAGEINN 190
Query: 215 VRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVI 274
+ M + PD YN+++R C G A+E+ + + +
Sbjct: 191 ALSVLDRMS---VSPDVVTYNTILRSLC-------DSGKLKQAMEVLDRMLQRD------ 234
Query: 275 CHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDAR 334
C+PDV++Y +I + C+D V A +L +M+ RG PDVV Y+ L++G C GR+D+A
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 335 KLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELF 394
K + S GC P+ ++N ++ S + +A L +M+ G P
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS----------- 343
Query: 395 RTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIE 454
+ FN L++ LC+ L A ++ +K+P++G +PN ++Y ++ G C E
Sbjct: 344 -----------VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 455 GGIEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMN 514
+++A IE L +M R PD +T + + L KD + +
Sbjct: 393 KKMDRA-----------------IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 515 LLPSFLSR 522
+L S+
Sbjct: 436 ILNQLSSK 443
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 151/354 (42%), Gaps = 38/354 (10%)
Query: 68 LNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNI 127
+ A+ + M TP + ++N L+ + + I + + G P+ ++ NI
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 128 LMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFD 187
++ C DA L +LRK FSP VVT LI LC +G A + K
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 188 CRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNW 247
C+PN + Y ++ G CK+ +++ M RG YPD YN+++ C
Sbjct: 375 CQPNSLS----YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 248 EDA----------------------------KGNTSAALELHEEFVNGNGELGVICHPDV 279
EDA G T A++L +E + PD
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD------LKPDT 484
Query: 280 LSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVS 339
++Y S++ L ++ VD+A + F + + GI P+ V ++S++ G C + D A V
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 340 IESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAEL 393
+ + GC P+ +SY LI + +EAL L E+ + G+ +S A ++
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGKM 598
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 21/143 (14%)
Query: 399 NTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIE 458
N+ F L+ N + + ++ L ++ + + +G P+++ T +I G C G
Sbjct: 95 NSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR 154
Query: 459 KAYDLLPDMEE------------------KIRECLKAIELLHKMAKRYVKPDEITVSILE 500
KA +L +E K E A+ +L +M+ V PD +T + +
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTIL 211
Query: 501 ELLNKDENCHECMNLLPSFLSRN 523
L + M +L L R+
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRD 234
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 174/367 (47%), Gaps = 41/367 (11%)
Query: 104 VNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCL 163
+NFI E N G PD + N L+N CK V A + +L++ + PDV T +
Sbjct: 279 LNFI--QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 164 IRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMK 223
I GLC G+ EA + + + DC PN + Y ++I LCK+ V + L +
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTV----TYNTLISTLCKENQVEEATELARVLT 392
Query: 224 GRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYC 283
+GI PD +NSLI+ C N A+EL EE + C PD +Y
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHR-------VAMELFEEMRSKG------CEPDEFTYN 439
Query: 284 SIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESE 343
+I+SLC +D+A + M+ G V+ Y++LIDG+C + +A ++F +E
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 344 GCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFE 403
G ++ +YNTLI+ K +VE+A L +MI G +PD
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK------------------- 540
Query: 404 LDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDL 463
+N L+ C+ ++ A ++ + + G EP++VTY +I GLC G +E A L
Sbjct: 541 ---YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 464 LPDMEEK 470
L ++ K
Sbjct: 598 LRSIQMK 604
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 29/396 (7%)
Query: 85 PFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVA 144
P + +FN L+ AL I + E + + GL+PD + +M + + + A
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 145 LGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIID 204
+++ S V++ ++ G C +G+ +A + D P+ + ++++
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD---GFFPDQYTFNTLVN 303
Query: 205 GLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEF 264
GLCK G V + M G PD + YNS+I C G A+E+ ++
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC-------KLGEVKEAVEVLDQM 356
Query: 265 VNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGY 324
+ + C P+ ++Y ++I++LCK+ V++A EL + S+GI+PDV ++SLI G
Sbjct: 357 ITRD------CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 325 CLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEM--------- 375
CL A +LF + S+GC PD +YN LI+S K++EAL++ +M
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 376 ISMGVRPDNSC----ILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKK 431
I+ D C EA E+F + + +N L+DGLCKS R+ A +L +
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 432 LPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM 467
+ G +P+ TY ++ C G I+KA D++ M
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 190/441 (43%), Gaps = 66/441 (14%)
Query: 113 LNTIGLLPDFVSLNILMNCFC-----KMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGL 167
++ GL PD N ++N K++ +S A +++ I PDV T LI+ L
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI-----KPDVSTFNVLIKAL 199
Query: 168 CMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGI 227
C + A + ++ ++P+ + +++ G ++G ++ + M G
Sbjct: 200 CRAHQLRPAILMLEDMPSY----GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 228 YPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIIN 287
N ++ +C +G AL +E N +G PD ++ +++N
Sbjct: 256 SWSNVSVNVIVHGFC-------KEGRVEDALNFIQEMSNQDG-----FFPDQYTFNTLVN 303
Query: 288 SLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIP 347
LCK V A E+ M G PDV Y+S+I G C +G + +A ++ + + C P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 348 DTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLT 407
+T +YNTLI++ K +VEEA L + S G+ PD +
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPD----------------------VC 401
Query: 408 VFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM 467
FN L+ GLC + R A ELF+++ G EP+ TY ++I LC +G +++A ++L M
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 468 EE------------------KIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENC 509
E K + +A E+ +M V + +T + L + L K
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 510 HECMNLLPSFLSRNQEESKLT 530
+ L+ + Q+ K T
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYT 542
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 17/319 (5%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
E+ +A+ + MI +P ++N+L+ L + L+ L + G+LPD + N
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
L+ C A + K PD T LI LC +GK EA + +
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
C +VI Y ++IDG CK + +F +M+ G+ ++ YN+LI C +
Sbjct: 465 GC----ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 247 WEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMK 306
EDA A + + + G PD +Y S++ C+ + KA ++ M
Sbjct: 521 VEDA------AQLMDQMIMEGQ-------KPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 307 SRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVE 366
S G PD+V Y +LI G C GR++ A KL SI+ +G +YN +I + K
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 367 EALSLYGEMISMGVRPDNS 385
EA++L+ EM+ P ++
Sbjct: 628 EAINLFREMLEQNEAPPDA 646
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 143/357 (40%), Gaps = 61/357 (17%)
Query: 189 RPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWE 248
+PN P Y I+ L + G + ++ + DMK + LI Y
Sbjct: 76 KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESY------- 128
Query: 249 DAKGNTSAALELHEEFVN----GNGELGVICHPDVLSYCSIINSLC-----KDVLVDKAK 299
A EL +E ++ E G+ PD Y ++N L K V + AK
Sbjct: 129 -------AQFELQDEILSVVDWMIDEFGL--KPDTHFYNRMLNLLVDGNSLKLVEISHAK 179
Query: 300 ELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSY 359
M GI PDV ++ LI C ++ A + + S G +PD ++ T++ Y
Sbjct: 180 -----MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 360 SKIEKVEEALSLYGEMISMGVRPDNSC-------------ILEAAELFRTLHNTK-FELD 405
+ ++ AL + +M+ G N + +A + + N F D
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 406 LTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLP 465
FN LV+GLCK+ ++ A E+ + + G +P+V TY +I GLC
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC------------- 341
Query: 466 DMEEKIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLLPSFLSR 522
K+ E +A+E+L +M R P+ +T + L L K+ E L S+
Sbjct: 342 ----KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 207/441 (46%), Gaps = 57/441 (12%)
Query: 68 LNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNI 127
++ A+ N M+ P ++NS+L I +++ + G+ PD V+ ++
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 128 LMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFD 187
LM+ CK +A + ++ P++ T G L++G +G E GL V
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 188 CRPN-------------------------------VIPNVICYASIIDGLCKDGFVNKVR 216
P+ + PN + Y ++I LCK G V
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 217 VLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICH 276
+ F M G+ P VYNSLI C WE A+ EL E ++ IC
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE-------ELILEMLDRG-----ICL 474
Query: 277 PDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKL 336
+ + SII+S CK+ V ++++LF M G+ P+V+ Y++LI+GYCL G++D+A KL
Sbjct: 475 NTIF-FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 337 FVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD---NSCILE---- 389
+ S G P+T +Y+TLIN Y KI ++E+AL L+ EM S GV PD + IL+
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 390 ------AAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVT 443
A EL+ + + +++L+ +N ++ GLCK+ A ++F+ L + T
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEART 653
Query: 444 YTVMICGLCIEGGIEKAYDLL 464
+ +MI L G ++A DL
Sbjct: 654 FNIMIDALLKVGRNDEAKDLF 674
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 197/471 (41%), Gaps = 85/471 (18%)
Query: 120 PDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGL 179
PD + IL+ C C+ + F ALG +++K F D + L++GLC + ++A +
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 180 -FTKFVAFDCRPNVI----------------------------------PNVICYASIID 204
+ C PNV P+V+ Y ++I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 205 GLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEF 264
G K+G +K + +M RGI PD YNS+I C A A++ E
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA-----------QAMDKAMEV 253
Query: 265 VNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGY 324
+N + GV+ PD ++Y SI++ C +A M+S G+ PDVV YS L+D
Sbjct: 254 LNTMVKNGVM--PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 325 CLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDN 384
C GR +ARK+F S+ G P+ ++Y TL+ Y+ + E L M+ G+ PD+
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 385 SC-------------ILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKK 431
+ +A +F + + + ++ LCKS R+ A F++
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 432 LPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM---------------------EEK 470
+ G P + Y +I GLC E+A +L+ +M E +
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 471 IRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLLPSFLS 521
+ E K EL+ ++ VKP+ IT + L E M LL +S
Sbjct: 492 VIESEKLFELMVRIG---VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 183/398 (45%), Gaps = 51/398 (12%)
Query: 117 GLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEA 176
G+LPD V+ N ++ CK + A L +++ PD +T ++ G C G+ EA
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285
Query: 177 SGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNS 236
G K + V P+V+ Y+ ++D LCK+G + R +F M RG+ P+ Y +
Sbjct: 286 IGFLKKMRS----DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341
Query: 237 LIRVYCCAVNWEDAKGNTSAALELHE--EFVNGNGELGVICHPDVLSYCSIINSLCKDVL 294
L++ Y KG A +E+H + + NG HPD + +I + K
Sbjct: 342 LLQGYA-------TKG---ALVEMHGLLDLMVRNG-----IHPDHYVFSILICAYAKQGK 386
Query: 295 VDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNT 354
VD+A +F M+ +G+ P+ V Y ++I C GR++DA F + EG P YN+
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 355 LINSYSKIEKVEEALSLYGEMISMGV---------RPDNSC----ILEAAELFRTLHNTK 401
LI+ K E A L EM+ G+ D+ C ++E+ +LF +
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 402 FELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAY 461
+ ++ +N L++G C + ++ A +L + G +PN VTY+ +I G C
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC--------- 557
Query: 462 DLLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSIL 499
KI A+ L +M V PD IT +I+
Sbjct: 558 --------KISRMEDALVLFKEMESSGVSPDIITYNII 587
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 152/336 (45%), Gaps = 38/336 (11%)
Query: 154 SPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIP-----NVICYASIIDGLCK 208
+PD+ T G LI C G+ + F NVI + I + ++ GLC
Sbjct: 84 TPDLCTYGILIGCCCRAGRLD---------LGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134
Query: 209 DGFV-NKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNG 267
D + + ++ M G P+ F YN L++ C + + ALEL +
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLC-------DENRSQEALELLHMMAD- 186
Query: 268 NGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLM 327
+ G PDV+SY ++IN K+ DKA + +M RGI+PDVV Y+S+I C
Sbjct: 187 --DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA 244
Query: 328 GRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD---- 383
+D A ++ ++ G +PD +YN++++ Y + +EA+ +M S GV PD
Sbjct: 245 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 384 ---------NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPR 434
N +EA ++F ++ + ++T + L+ G L L + R
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 435 YGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
G P+ ++++IC +G +++A + M ++
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 157/332 (47%), Gaps = 25/332 (7%)
Query: 62 KSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPD 121
KSG VE DA+ +F MI +P +NSL+ L + L + G+ +
Sbjct: 418 KSGRVE--DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 122 FVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFT 181
+ N +++ CK V ++ ++R P+V+T LI G C+ GK EA L +
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 182 KFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVY 241
V+ +PN + Y+++I+G CK + VLF +M+ G+ PD YN +++
Sbjct: 536 GMVSVGLKPNTVT----YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Query: 242 CCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKEL 301
++ + T+AA EL+ ++ ++ +Y I++ LCK+ L D A ++
Sbjct: 592 -----FQTRR--TAAAKELYVRITESGTQI------ELSTYNIILHGLCKNKLTDDALQM 638
Query: 302 FLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSK 361
F ++ + + ++ +ID +GR D+A+ LFV+ S G +P+ +Y + +
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 362 IEKVEEALSLYGEMISMGVRPDNSCILEAAEL 393
+EE L+ M DN C +++ L
Sbjct: 699 QGLLEELDQLFLSM------EDNGCTVDSGML 724
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 35/249 (14%)
Query: 310 IIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEAL 369
+ PD+ Y LI C GR+D ++ +G D ++ L+ ++ +A+
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 370 SL-YGEMISMGVRP-------------DNSCILEAAELFRTLHNTKFEL---DLTVFNCL 412
+ M +G P D + EA EL + + + D+ + +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 413 VDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK-- 470
++G K A+ + ++ G P+VVTY +I LC ++KA ++L M +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 471 IRECL----------------KAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMN 514
+ +C+ +AI L KM V+PD +T S+L + L K+ C E
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 515 LLPSFLSRN 523
+ S R
Sbjct: 323 IFDSMTKRG 331
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 214/474 (45%), Gaps = 37/474 (7%)
Query: 12 AFKVKPSSSLRNSKKPISLNSENEPSSLHSNSVSTVEEKTKLLKYLSENSKSGEVELNDA 71
+F ++ S + S+ +L N SS ++ V T + + EN K+ EL
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSS-QGCEMNVVAYCTVVGGFYEENFKAEGYEL--- 203
Query: 72 LCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNC 131
F M+ + + +FN LL L K L +++ G+LP+ + N+ +
Sbjct: 204 ---FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 132 FCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPN 191
C+ + A +G ++ + PDV+T LI GLC KF EA K V
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV----NEG 316
Query: 192 VIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAK 251
+ P+ Y ++I G CK G V + D G PD F Y SLI C +
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC-------HE 369
Query: 252 GNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGII 311
G T+ AL L E LG P+V+ Y ++I L ++ +A +L +M +G+I
Sbjct: 370 GETNRALALFNE------ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Query: 312 PDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSL 371
P+V ++ L++G C MG + DA L + S+G PD ++N LI+ YS K+E AL +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 372 YGEMISMGVRPD-------------NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCK 418
M+ GV PD S + E ++T+ +L FN L++ LC+
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 419 SWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIR 472
+L A L +++ P+ VT+ +I G C G ++ AY L MEE +
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 199/450 (44%), Gaps = 60/450 (13%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLL-GALAGKKYYVNFICLSERLNTIGLLPDFVSL 125
EL+ A+ +I P P + ++N+L+ G K+ + L + +N GL PD +
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDSYTY 324
Query: 126 NILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVA 185
N L+ +CK V A +G + F PD T LI GLC +G+ A LF + +
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 186 FDCRPNVI-------------------------------PNVICYASIIDGLCKDGFVNK 214
+PNVI P V + +++GLCK G V+
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 215 VRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVI 274
L M +G +PD F +N LI Y + E+A LE+ + ++ NG
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA-------LEILDVMLD-NG----- 491
Query: 275 CHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDAR 334
PDV +Y S++N LCK + E + M +G P++ ++ L++ C ++D+A
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 335 KLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEM--------------ISMGV 380
L ++++ PD ++ TLI+ + K ++ A +L+ +M I +
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 381 RPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPN 440
+ + A +LF+ + + D + +VDG CK+ + ++ ++ G P+
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671
Query: 441 VVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
+ T +I LC+E + +A ++ M +K
Sbjct: 672 LTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 149/351 (42%), Gaps = 69/351 (19%)
Query: 170 QGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYP 229
+GK EA +F + +DC P V Y +I+ L G+ ++ +++ M+ RGI P
Sbjct: 89 KGKVQEAVNVFERMDFYDCEPTVFS----YNAIMSVLVDSGYFDQAHKVYMRMRDRGITP 144
Query: 230 DAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINS- 288
D + + ++ +C AAL L +N G C +V++YC+++
Sbjct: 145 DVYSFTIRMKSFC-------KTSRPHAALRL----LNNMSSQG--CEMNVVAYCTVVGGF 191
Query: 289 ----------------------------------LCKDVLVDKAKELFLDMKSRGIIPDV 314
LCK V + ++L + RG++P++
Sbjct: 192 YEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 315 VVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGE 374
Y+ I G C G +D A ++ + +G PD +YN LI K K +EA G+
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 375 MISMGVRPDN------------SCILEAAELFRTLHNTKFEL---DLTVFNCLVDGLCKS 419
M++ G+ PD+ +++ AE R + + F D + L+DGLC
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAE--RIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 420 WRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
A LF + G +PNV+ Y +I GL +G I +A L +M EK
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 153/355 (43%), Gaps = 53/355 (14%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVS 124
E E N AL FN + P + +N+L+ L+ + + L+ ++ GL+P+ +
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 125 LNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFV 184
NIL+N CKM VSDA + ++ K + PD+ T LI G Q K A + V
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD--V 486
Query: 185 AFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCA 244
D V P+V Y S+++GLCK V + M +G P+ F +N L+ C
Sbjct: 487 MLD--NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 245 VNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKA------ 298
++A G L EE N + +PD +++ ++I+ CK+ +D A
Sbjct: 545 RKLDEALG-------LLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 299 ------------------------------KELFLDMKSRGIIPDVVVYSSLIDGYCLMG 328
++LF +M R + PD Y ++DG+C G
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 329 RIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD 383
++ K + + G IP ++ +IN ++V EA + M+ G+ P+
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 37/288 (12%)
Query: 199 YASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIR-VYCCAVNWEDAKGNTSAA 257
Y S+I+ L G + + +DM+ V N ++ VY A+ KG A
Sbjct: 43 YRSVIEKLGYYGKFEAMEEVLVDMREN-------VGNHMLEGVYVGAMKNYGRKGKVQEA 95
Query: 258 LELHE--EFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVV 315
+ + E +F + C P V SY +I++ L D+A ++++ M+ RGI PDV
Sbjct: 96 VNVFERMDFYD--------CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 316 VYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEM 375
++ + +C R A +L ++ S+GC + +Y T++ + + E L+G+M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 376 ISMGVRPDNSCILEAAELFRTL------HNTKFELD----------LTVFNCLVDGLCKS 419
++ GV + C+ +L R L + LD L +N + GLC+
Sbjct: 208 LASGV---SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 420 WRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM 467
L A + L GP+P+V+TY +I GLC ++A L M
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 88 PSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGR 147
P++N ++ A K L + + L PD + ++++ FCK V+ + L
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662
Query: 148 ILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVIC 198
++ F P + TLG +I LC++ + EA+G+ + V P + N IC
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV-NTIC 712
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 175/364 (48%), Gaps = 31/364 (8%)
Query: 120 PDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGL 179
P+ + N ++N +CK+ V +A + +I+ PD T LI G C + A +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 180 FTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIR 239
F + CR N + Y +I GLC +++ LF+ MK +P Y LI+
Sbjct: 276 FNEMPLKGCRRNEV----AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 240 VYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAK 299
C S AL L +E E G+ P++ +Y +I+SLC +KA+
Sbjct: 332 SLC-------GSERKSEALNLVKEM----EETGI--KPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 300 ELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSY 359
EL M +G++P+V+ Y++LI+GYC G I+DA + +ES P+T +YN LI Y
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 360 SKIEKVEEALSLYGEMISMGVRPD----NSCIL---------EAAELFRTLHNTKFELDL 406
K V +A+ + +M+ V PD NS I A L +++ D
Sbjct: 439 CK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 407 TVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPD 466
+ ++D LCKS R+ A +LF L + G PNVV YT +I G C G +++A+ +L
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 467 MEEK 470
M K
Sbjct: 558 MLSK 561
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 200/415 (48%), Gaps = 31/415 (7%)
Query: 68 LNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNI 127
+++A+ F M + P + ++ L+ +L G + + L + + G+ P+ + +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 128 LMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFD 187
L++ C A LG++L K P+V+T LI G C +G +A V
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA----VDVVELM 419
Query: 188 CRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNW 247
+ PN Y +I G CK V+K + M R + PD YNSLI C + N+
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 248 EDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKS 307
+ A S +N G + PD +Y S+I+SLCK V++A +LF ++
Sbjct: 479 DSAYRLLS--------LMNDRGLV-----PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 308 RGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEE 367
+G+ P+VV+Y++LIDGYC G++D+A + + S+ C+P++ ++N LI+ K++E
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 368 ALSLYGEMISMGVRPDNS--CIL-----------EAAELFRTLHNTKFELDLTVFNCLVD 414
A L +M+ +G++P S IL A F+ + ++ + D + +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 415 GLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE 469
C+ RL A ++ K+ G P++ TY+ +I G G A+D+L M +
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 184/453 (40%), Gaps = 92/453 (20%)
Query: 117 GLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEA 176
GL PDF + L+ +C+ + AF + K + V LI GLC+ + EA
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 177 SGLFTKFVAFDCRPNV-------------------------------IPNVICYASIIDG 205
LF K +C P V PN+ Y +ID
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 206 LCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDA------------KGN 253
LC K R L M +G+ P+ YN+LI YC EDA N
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 254 TSAALELHEEFVNGN--GELGVICH-------PDVLSYCSIINSLCKDVLVDKAKELFLD 304
T EL + + N +GV+ PDV++Y S+I+ C+ D A L
Sbjct: 428 TRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 305 MKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEK 364
M RG++PD Y+S+ID C R+++A LF S+E +G P+ Y LI+ Y K K
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 365 VEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRS 424
V+EA + +M+S P++ FN L+ GLC +L+
Sbjct: 548 VDEAHLMLEKMLSKNCLPNS----------------------LTFNALIHGLCADGKLKE 585
Query: 425 AWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM----------------E 468
A L +K+ + G +P V T T++I L +G + AY M +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 469 EKIRE--CLKAIELLHKMAKRYVKPDEITVSIL 499
RE L A +++ KM + V PD T S L
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 151/319 (47%), Gaps = 52/319 (16%)
Query: 198 CYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAA 257
CY ++++ L + G V++++ ++++M + P+ + YN ++ YC N E+A
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEAN------ 238
Query: 258 LELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVY 317
++V+ E G+ PD +Y S+I C+ +D A ++F +M +G + V Y
Sbjct: 239 -----QYVSKIVEAGL--DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY 291
Query: 318 SSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMIS 377
+ LI G C+ RID+A LFV ++ + C P +Y LI S E+ EAL+L EM
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351
Query: 378 MGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGP 437
G++P ++ + L+D LC + A EL ++ G
Sbjct: 352 TGIKP----------------------NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 438 EPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK-----------------IRECLKAIEL 480
PNV+TY +I G C G IE A D++ ME + KA+ +
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGV 449
Query: 481 LHKMAKRYVKPDEITVSIL 499
L+KM +R V PD +T + L
Sbjct: 450 LNKMLERKVLPDVVTYNSL 468
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 174/413 (42%), Gaps = 36/413 (8%)
Query: 62 KSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPD 121
K G +E DA+ M + +P ++N L+ + L++ L +LPD
Sbjct: 405 KRGMIE--DAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER-KVLPD 461
Query: 122 FVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFT 181
V+ N L++ C+ A+ L + + PD T +I LC + EA LF
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 182 KFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVY 241
+ V PNV+ Y ++IDG CK G V++ ++ M + P++ +N+LI
Sbjct: 522 SLE----QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 242 CCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKEL 301
C A G A L E+ V ++G+ P V + +I+ L KD D A
Sbjct: 578 C-------ADGKLKEATLLEEKMV----KIGL--QPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 302 FLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSK 361
F M S G PD Y++ I YC GR+ DA + + G PD +Y++LI Y
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 362 IEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKF------ELDLTVFNCLVDG 415
+ + A + M G P L L + L K+ E +L + +++
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLS---LIKHLLEMKYGKQKGSEPELCAMSNMME- 740
Query: 416 LCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDME 468
+ EL +K+ + PN +Y +I G+C G + A + M+
Sbjct: 741 ------FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 172/420 (40%), Gaps = 58/420 (13%)
Query: 85 PFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVA 144
P ++ S++ +L K L + L G+ P+ V L++ +CK V +A +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 145 LGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIID 204
L ++L K P+ +T LI GLC GK EA+ L K V +P V + I +I
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI----LIH 610
Query: 205 GLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAK--------GNTSA 256
L KDG + F M G PDA Y + I+ YC DA+ S
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 257 ALELHEEFVNGNGELGVI--------------CHPDVLSYCSIINSLCKD---------- 292
L + + G G+LG C P ++ S+I L +
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP 730
Query: 293 --------VLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIE-SE 343
+ D EL M + P+ Y LI G C +G + A K+F ++ +E
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Query: 344 GCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD-NSCIL------------EA 390
G P +N L++ K++K EA + +MI +G P SC +
Sbjct: 791 GISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERG 850
Query: 391 AELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICG 450
+F+ L + D + ++DG+ K + + +ELF + + G + + TY+++I G
Sbjct: 851 TSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 218/458 (47%), Gaps = 38/458 (8%)
Query: 85 PFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVA 144
P + ++N+L+ A + K L + G P + N ++N CK A
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 145 LGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIID 204
+LR SPD T L+ C +G E +F+ + D V+P+++C++S++
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD----VVPDLVCFSSMMS 383
Query: 205 GLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEF 264
+ G ++K + F +K G+ PD +Y LI+ YC KG S A+ L E
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC-------RKGMISVAMNLRNEM 436
Query: 265 VNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGY 324
+ C DV++Y +I++ LCK ++ +A +LF +M R + PD + LIDG+
Sbjct: 437 LQQG------CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 325 CLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP-- 382
C +G + +A +LF ++ + D +YNTL++ + K+ ++ A ++ +M+S + P
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 383 -DNSCILEA-------AELFRT---LHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKK 431
S ++ A AE FR + + + + + N ++ G C+S +K
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 432 LPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK----IRECLKAIELLHKMAKR 487
+ G P+ ++Y +I G E + KA+ L+ MEE+ + + +LH ++
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 488 -YVKPDEITV-SILEELLNKDENCHECMNLLPSFLSRN 523
+K E+ + ++E +N D + + CM + F+S++
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCM--INGFVSQD 706
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 191/433 (44%), Gaps = 56/433 (12%)
Query: 91 NSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILR 150
N+L+G+L + + + ++ G+ + +LNI++N CK + L ++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 151 KVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDG 210
K PD+VT LI +G EA L P V Y ++I+GLCK G
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG----KGFSPGVYTYNTVINGLCKHG 319
Query: 211 FVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGE 270
+ + +F +M G+ PD+ Y SL+ C KG+ +E + F +
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC-------KKGD---VVETEKVFSDMRSR 369
Query: 271 LGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRI 330
V PD++ + S+++ + +DKA F +K G+IPD V+Y+ LI GYC G I
Sbjct: 370 DVV---PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 331 DDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEA 390
A L + +GC D +YNT+++ K + + EA L+ EM + PD+
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS------ 480
Query: 391 AELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICG 450
LT+ L+DG CK L++A ELF+K+ +VVTY ++ G
Sbjct: 481 -------------YTLTI---LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 451 LCIEGGIEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCH 510
G I+ A ++ DM K E+L P I+ SIL L +
Sbjct: 525 FGKVGDIDTAKEIWADMVSK--------EIL---------PTPISYSILVNALCSKGHLA 567
Query: 511 ECMNLLPSFLSRN 523
E + +S+N
Sbjct: 568 EAFRVWDEMISKN 580
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 145/316 (45%), Gaps = 19/316 (6%)
Query: 71 ALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMN 130
A+ N M+ + ++N++L L +K L + L PD +L IL++
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 131 CFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRP 190
CK+ + +A ++ K DVVT L+ G G A ++ V+
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS----K 544
Query: 191 NVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDA 250
++P I Y+ +++ LC G + + ++ +M + I P + NS+I+ YC + N D
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD- 603
Query: 251 KGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSR-- 308
G + + E FV PD +SY ++I ++ + KA L M+
Sbjct: 604 -GESFLEKMISEGFV-----------PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 309 GIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEA 368
G++PDV Y+S++ G+C ++ +A + + G PD S+Y +IN + + + EA
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 369 LSLYGEMISMGVRPDN 384
++ EM+ G PD+
Sbjct: 712 FRIHDEMLQRGFSPDD 727
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 192/449 (42%), Gaps = 71/449 (15%)
Query: 105 NFICLSER-LNTIGL-LPDF----VSLNILMNCFCKMIGVSDAFVALGRILRK------- 151
N + L +R ++ +G P+F +SL+ +++ + +SDA L R++R+
Sbjct: 90 NDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLE 149
Query: 152 -VFSPDVVTLGC---------LIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYAS 201
V S D C LIR K EA FT + + C A
Sbjct: 150 IVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFT---LLRSKGFTVSIDACNA- 205
Query: 202 IIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELH 261
+I L + G+V ++ ++ G+ + + N ++ C +D K +E
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALC-----KDGK------MEKV 254
Query: 262 EEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLI 321
F++ E GV +PD+++Y ++I++ L+++A EL M +G P V Y+++I
Sbjct: 255 GTFLSQVQEKGV--YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVI 312
Query: 322 DGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVR 381
+G C G+ + A+++F + G PD+++Y +L+ K V E ++ +M S V
Sbjct: 313 NGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVV 372
Query: 382 PDNSCILEAAELFRTLHNTKFEL-------------DLTVFNCLVDGLCKSWRLRSAWEL 428
PD C LF N L D ++ L+ G C+ + A L
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 429 FKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE------------------K 470
++ + G +VVTY ++ GLC + +A L +M E K
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 471 IRECLKAIELLHKMAKRYVKPDEITVSIL 499
+ A+EL KM ++ ++ D +T + L
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 201/415 (48%), Gaps = 35/415 (8%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
E++ AL M P + +L+ +L+ + L E + +G +PD + N
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
++ CK +++A + R+L + F+PD +T G L+ GLC G+ A LF +
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK- 350
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDM-KGRGIYPDAFVYNSLIRVYCCAV 245
P ++ + ++I G G ++ + + DM GI PD YNSLI Y
Sbjct: 351 -------PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY---- 399
Query: 246 NWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDM 305
W++ G ALE+ + N C P+V SY +++ CK +D+A + +M
Sbjct: 400 -WKE--GLVGLALEVLHDMRNKG------CKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 306 KSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKV 365
+ G+ P+ V ++ LI +C RI +A ++F + +GC PD ++N+LI+ +++++
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 366 EEALSLYGEMISMGVRPDNSC-------------ILEAAELFRTLHNTKFELDLTVFNCL 412
+ AL L +MIS GV + I EA +L + LD +N L
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 413 VDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM 467
+ GLC++ + A LF+K+ R G P+ ++ ++I GLC G +E+A + +M
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 196/442 (44%), Gaps = 45/442 (10%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
+N+AL M M P +FN ++ L + R+ G PD ++
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
LMN CK IG DA L ++ P++V LI G G+ +A + + V
Sbjct: 327 YLMNGLCK-IGRVDAAKDL---FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT- 381
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
++P+V Y S+I G K+G V + DM+ +G P+ + Y L+ +C
Sbjct: 382 --SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 247 WEDAKG--NTSAALELHEEFVNGNGELGVICH--------------------PDVLSYCS 284
++A N +A L V N + C PDV ++ S
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 285 IINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEG 344
+I+ LC+ + A L DM S G++ + V Y++LI+ + G I +ARKL + +G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 345 CIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDN-SC------------ILEAA 391
D +YN+LI + +V++A SL+ +M+ G P N SC + EA
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 392 ELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGL 451
E + + D+ FN L++GLC++ R+ +F+KL G P+ VT+ ++ L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 452 CIEGGIEKAYDLLPDMEEKIRE 473
C +GG YD ++E I +
Sbjct: 680 C-KGGF--VYDACLLLDEGIED 698
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 189/406 (46%), Gaps = 33/406 (8%)
Query: 75 FNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCK 134
F M+ + P + +F ++ A + + L + G +P+ V L++ K
Sbjct: 205 FYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSK 264
Query: 135 MIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIP 194
V++A L + PD T +I GLC + EA+ + + + P
Sbjct: 265 CNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI----RGFAP 320
Query: 195 NVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNT 254
+ I Y +++GLCK G V+ + LF R P+ ++N+LI + +DAK
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFY----RIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 255 SAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDV 314
S + + G++ PDV +Y S+I K+ LV A E+ DM+++G P+V
Sbjct: 377 SDMVTSY----------GIV--PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 315 VVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGE 374
Y+ L+DG+C +G+ID+A + + ++G P+T +N LI+++ K ++ EA+ ++ E
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 375 MISMGVRPD----NSC---------ILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWR 421
M G +PD NS I A L R + + + +N L++ +
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 422 LRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM 467
++ A +L ++ G + +TY +I GLC G ++KA L M
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 142/290 (48%), Gaps = 22/290 (7%)
Query: 117 GLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEA 176
GL P+ V N L++ FCK + +A + RK PDV T LI GLC + A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 177 SGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNS 236
L ++ V+ N + Y ++I+ + G + + R L +M +G D YNS
Sbjct: 514 LWLLRDMIS----EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 237 LIRVYCCAVNWEDAKGNTSAALELHEEFV-NGNGELGVICHPDVLSYCSIINSLCKDVLV 295
LI+ C A G A L E+ + +G+ + C+ +IN LC+ +V
Sbjct: 570 LIKGLCRA-------GEVDKARSLFEKMLRDGHAPSNISCN-------ILINGLCRSGMV 615
Query: 296 DKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTL 355
++A E +M RG PD+V ++SLI+G C GRI+D +F +++EG PDT ++NTL
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 356 INSYSKIEKVEEALSLYGEMISMGVRPDN---SCILEAAELFRTLHNTKF 402
++ K V +A L E I G P++ S +L++ TL +F
Sbjct: 676 MSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRF 725
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 169/380 (44%), Gaps = 31/380 (8%)
Query: 83 PTPFMPSFNSLL-GALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDA 141
P P + FN+L+ G + + LS+ + + G++PD + N L+ + K V A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 142 FVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYAS 201
L + K P+V + L+ G C GK EA + + A + PN + +
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA----DGLKPNTVGFNC 464
Query: 202 IIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELH 261
+I CK+ + + +F +M +G PD + +NSLI C AL L
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC-------EVDEIKHALWLL 517
Query: 262 EEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLI 321
+ ++ GV+ + ++Y ++IN+ + + +A++L +M +G D + Y+SLI
Sbjct: 518 RDMISE----GVVA--NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 322 DGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVR 381
G C G +D AR LF + +G P S N LIN + VEEA+ EM+ G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 382 PD----NSCI---------LEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWEL 428
PD NS I + +FR L D FN L+ LCK + A L
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 429 FKKLPRYGPEPNVVTYTVMI 448
+ G PN T+++++
Sbjct: 692 LDEGIEDGFVPNHRTWSILL 711
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 171/390 (43%), Gaps = 66/390 (16%)
Query: 123 VSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTK 182
V L IL++ C + + + L R + P + T G +++ C + A L
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKI----PPTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 183 FVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYC 242
C +PN + Y ++I L K VN+ L +M G PDA +N +I C
Sbjct: 243 MTKHGC----VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 243 CAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELF 302
+ + N +A + ++ + G PD ++Y ++N LCK VD AK+LF
Sbjct: 299 -----KFDRINEAAKM-VNRMLIRGFA-------PDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 303 LDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVS-IESEGCIPDTSSYNTLINSYSK 361
+ P++V++++LI G+ GR+DDA+ + + S G +PD +YN+LI Y K
Sbjct: 346 YRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 362 IEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWR 421
V AL + +M + G +P+ + + LVDG CK +
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPN----------------------VYSYTILVDGFCKLGK 439
Query: 422 LRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIRECLKAIELL 481
+ A+ + ++ G +PN V + +I C E +I E A+E+
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFC--------------KEHRIPE---AVEIF 482
Query: 482 HKMAKRYVKPDEITV-SILEELLNKDENCH 510
+M ++ KPD T S++ L DE H
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 17/270 (6%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVS 124
E + +A+ F M P + +FNSL+ L + + L + + G++ + V+
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 125 LNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFV 184
N L+N F + + +A + ++ + D +T LI+GLC G+ +A LF K +
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 185 AFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCA 244
R P+ I +I+GLC+ G V + +M RG PD +NSLI C A
Sbjct: 592 ----RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 245 VNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLD 304
ED + +L E + PD +++ ++++ LCK V A L +
Sbjct: 648 GRIEDG---LTMFRKLQAEGI----------PPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Query: 305 MKSRGIIPDVVVYSSLIDGYCLMGRIDDAR 334
G +P+ +S L+ +D R
Sbjct: 695 GIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 81/216 (37%), Gaps = 32/216 (14%)
Query: 316 VYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEM 375
VY LI G +L + ++ EG + S + +++ Y K + L EM
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 376 --------------ISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWR 421
+ + + +C AA +F + + K L F ++ C
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 422 LRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLL---------PDMEE--- 469
+ SA L + + ++G PN V Y +I L + +A LL PD E
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 470 ------KIRECLKAIELLHKMAKRYVKPDEITVSIL 499
K +A +++++M R PD+IT L
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 201/426 (47%), Gaps = 35/426 (8%)
Query: 60 NSKSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLL 119
NS LN ++ +FN M+ P FN LL + G + + N ++
Sbjct: 102 NSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVV 160
Query: 120 PDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGL 179
D S IL+ C+ + +F L + FSP+VV LI G C +G+ +A L
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 180 FTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIR 239
F + + ++ N Y +I+GL K+G + ++ M+ G++P+ + YN
Sbjct: 221 FFEM----GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN---- 272
Query: 240 VYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAK 299
C +N G T A ++ +E E GV C ++++Y ++I LC+++ +++A
Sbjct: 273 ---CVMNQLCKDGRTKDAFQVFDEM----RERGVSC--NIVTYNTLIGGLCREMKLNEAN 323
Query: 300 ELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSY 359
++ MKS GI P+++ Y++LIDG+C +G++ A L ++S G P +YN L++ +
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 360 SKIEKVEEALSLYGEMISMGVRP---------------DNSCILEAAELFRTLHNTKFEL 404
+ A + EM G++P DN + +A +L ++
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN--MEKAIQLRLSMEELGLVP 441
Query: 405 DLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLL 464
D+ ++ L+ G C ++ A LFK + EPN V Y MI G C EG +A LL
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Query: 465 PDMEEK 470
+MEEK
Sbjct: 502 KEMEEK 507
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 187/399 (46%), Gaps = 54/399 (13%)
Query: 156 DVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKV 215
DV + G LI+G C G+ ++ L + F PNV+ Y ++IDG CK G + K
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEF----GFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 216 RVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVIC 275
+ LF +M G+ + R Y +N G E++E+ E GV
Sbjct: 218 KDLFFEMGKLGLVANE-------RTYTVLINGLFKNGVKKQGFEMYEKM----QEDGVF- 265
Query: 276 HPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARK 335
P++ +Y ++N LCKD A ++F +M+ RG+ ++V Y++LI G C ++++A K
Sbjct: 266 -PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANK 324
Query: 336 LFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP------------- 382
+ ++S+G P+ +YNTLI+ + + K+ +ALSL ++ S G+ P
Sbjct: 325 VVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384
Query: 383 ---DNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEP 439
D S AA++ + + + + L+D +S + A +L + G P
Sbjct: 385 RKGDTSG---AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 440 NVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIRE------------------CLKAIELL 481
+V TY+V+I G CI+G + +A L M EK E +A++LL
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Query: 482 HKMAKRYVKPDEITVSILEELLNKDENCHECMNLLPSFL 520
+M ++ + P+ + + E+L K+ E L+ +
Sbjct: 502 KEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 161/333 (48%), Gaps = 39/333 (11%)
Query: 109 LSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLC 168
+ E++ G+ P+ + N +MN CK DAF + + S ++VT LI GLC
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 169 MQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIY 228
+ K EA+ + + + + PN+I Y ++IDG C G + K L D+K RG+
Sbjct: 315 REMKLNEANKVVDQMKS----DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 229 PDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINS 288
P YN L+ +C KG+TS A ++ +E E G+ P ++Y +I++
Sbjct: 371 PSLVTYNILVSGFC-------RKGDTSGAAKMVKEM----EERGI--KPSKVTYTILIDT 417
Query: 289 LCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPD 348
+ ++KA +L L M+ G++PDV YS LI G+C+ G++++A +LF S+ + C P+
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 349 TSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTV 408
YNT+I Y K AL L EM + P ++
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP----------------------NVAS 515
Query: 409 FNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNV 441
+ +++ LCK + + A L +K+ G +P+
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 17/254 (6%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVS 124
E++LN+A + M P + ++N+L+ G + L L + GL P V+
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 125 LNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFV 184
NIL++ FC+ S A + + + P VT LI +A L
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 185 AFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCA 244
++P+V Y+ +I G C G +N+ LF M + P+ +YN++I YC
Sbjct: 436 EL----GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC-- 489
Query: 245 VNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLD 304
+G++ AL+L +E EL P+V SY +I LCK+ +A+ L
Sbjct: 490 -----KEGSSYRALKLLKEM--EEKELA----PNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 305 MKSRGIIPDVVVYS 318
M GI P + S
Sbjct: 539 MIDSGIDPSTSILS 552
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 31/229 (13%)
Query: 302 FLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSK 361
F + ++ DV + LI G C G I+ + L + + G P+ Y TLI+ K
Sbjct: 151 FFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 362 IEKVEEALSLYGEMISMGVRPD-------------NSCILEAAELFRTLHNTKFELDLTV 408
++E+A L+ EM +G+ + N + E++ + +L
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 409 FNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDME 468
+NC+++ LCK R + A+++F ++ G N+VTY +I GLC E + +A ++ M+
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 469 EK------------------IRECLKAIELLHKMAKRYVKPDEITVSIL 499
+ + KA+ L + R + P +T +IL
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 341 ESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSC-------ILEAAEL 393
ESE Y +INSY + + + ++S + EM+ G P ++C ++ ++
Sbjct: 86 ESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSF 145
Query: 394 -----FRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMI 448
F + +K LD+ F L+ G C++ + +++L +L +G PNVV YT +I
Sbjct: 146 NQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205
Query: 449 CGLCIEGGIEKAYDLLPDM 467
G C +G IEKA DL +M
Sbjct: 206 DGCCKKGEIEKAKDLFFEM 224
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 193/389 (49%), Gaps = 53/389 (13%)
Query: 148 ILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLC 207
++R+ P+V T +I LC GK +A + + C PNV+ Y ++IDG C
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVV----SYNTLIDGYC 269
Query: 208 K---DGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEF 264
K +G + K + +M + P+ +N LI + W+D N ++++ +E
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF-----WKD--DNLPGSMKVFKEM 322
Query: 265 VNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGY 324
++ + P+V+SY S+IN LC + +A + M S G+ P+++ Y++LI+G+
Sbjct: 323 LDQD------VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 325 CLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD- 383
C + +A +F S++ +G +P T YN LI++Y K+ K+++ +L EM G+ PD
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 384 ------------NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKK 431
N I A +LF L +K DL F+ L++G C+ R A L K+
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQL-TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 432 LPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIR------------------- 472
+ + G +P +TY +++ G C EG ++ A ++ ME++ R
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 473 ECLKAIELLHKMAKRYVKPDEITVSILEE 501
+ A LL++M ++ + P+ IT I++E
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 176/390 (45%), Gaps = 53/390 (13%)
Query: 84 TPFMPSFNSLLGAL-----AGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGV 138
+P + S+N+L+ GK Y + + N + P+ + NIL++ F K +
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVS--PNLTTFNILIDGFWKDDNL 312
Query: 139 SDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVIC 198
+ +L + P+V++ LI GLC GK +EA + K V+ V PN+I
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS----AGVQPNLIT 368
Query: 199 YASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAAL 258
Y ++I+G CK+ + + +F +KG+G P +YN LI YC G
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC-------KLGKIDDGF 421
Query: 259 ELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYS 318
L EE G++ PDV +Y +I LC++ ++ AK+LF + S+G +PD+V +
Sbjct: 422 ALKEEM----EREGIV--PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFH 474
Query: 319 SLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISM 378
L++GYC G A L + G P +YN ++ Y K ++ A ++ +M
Sbjct: 475 ILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM--- 531
Query: 379 GVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPE 438
E R L +++ +N L+ G + +L A L ++ G
Sbjct: 532 -------------EKERRLR-----MNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Query: 439 PNVVTYTVMICGLCIEGGIEKAYDLLPDME 468
PN +TY ++ + +G +PD+E
Sbjct: 574 PNRITYEIVKEEMVDQG-------FVPDIE 596
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 35/310 (11%)
Query: 75 FNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCK 134
F M+ P + S+NSL+ L I + +++ + G+ P+ ++ N L+N FCK
Sbjct: 319 FKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
Query: 135 MIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIP 194
+ +A G + + P LI C GK + L + R ++P
Sbjct: 379 NDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME----REGIVP 434
Query: 195 NVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNT 254
+V Y +I GLC++G + + LF + +G+ PD ++ L+ YC KG +
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYC-------RKGES 486
Query: 255 SAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDM-KSRGIIPD 313
A L +E ++G+ P L+Y ++ CK+ + A + M K R + +
Sbjct: 487 RKAAMLLKEM----SKMGL--KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMN 540
Query: 314 VVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYG 373
V Y+ L+ GY G+++DA L + +G +P+ +Y E V+E
Sbjct: 541 VASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY----------EIVKE------ 584
Query: 374 EMISMGVRPD 383
EM+ G PD
Sbjct: 585 EMVDQGFVPD 594
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 17/251 (6%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
++++A+ + M+ P + ++N+L+ + + + G +P N
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
+L++ +CK+ + D F + R+ PDV T CLI GLC G A LF + +
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS- 464
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
+P+++ + +++G C+ G K +L +M G+ P YN +++ YC
Sbjct: 465 ----KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC---- 516
Query: 247 WEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMK 306
+GN AA + + E +V SY ++ + ++ A L +M
Sbjct: 517 ---KEGNLKAATNMRTQM-----EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Query: 307 SRGIIPDVVVY 317
+G++P+ + Y
Sbjct: 569 EKGLVPNRITY 579
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 393 LFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLC 452
+++ + K + ++ FN +++ LCK+ ++ A ++ + + YG PNVV+Y +I G C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 453 IEGGIEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHEC 512
GG K Y KA +L +M + V P+ T +IL + KD+N
Sbjct: 270 KLGGNGKMY--------------KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGS 315
Query: 513 MNLLPSFLSRN 523
M + L ++
Sbjct: 316 MKVFKEMLDQD 326
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 190/423 (44%), Gaps = 73/423 (17%)
Query: 117 GLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEA 176
G+LPD V L++ FCK + A + + +PDV+T +I G C G EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 177 SGLFTKFVAFDCRPNVI-------------------------------PNVICYASIIDG 205
LF + P+ + PNV+ Y ++IDG
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 206 LCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFV 265
LCK+G ++ L +M G+ P+ F YNS++ C GN A++L EF
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC-------KSGNIEEAVKLVGEFE 518
Query: 266 NGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYC 325
+ D ++Y +++++ CK +DKA+E+ +M +G+ P +V ++ L++G+C
Sbjct: 519 AAG------LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 326 LMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNS 385
L G ++D KL + ++G P+ +++N+L+ Y ++ A ++Y +M S GV PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG- 631
Query: 386 CILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYT 445
+T N LV G CK+ ++ AW LF+++ G +V TY+
Sbjct: 632 ---------KTYEN------------LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 446 VMICGLCIEGGIEKAYDLLPDMEEKIRECLKA----IELLHKMAKRYVKPDEITVSILEE 501
V+I G +A ++ M RE L A + + +PD I I E
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMR---REGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Query: 502 LLN 504
+ N
Sbjct: 728 IEN 730
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 184/375 (49%), Gaps = 30/375 (8%)
Query: 109 LSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLC 168
L E + GL P+ ++ C++ +++A A ++R+ PD V LI G C
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 169 MQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIY 228
+G AS F + + D + P+V+ Y +II G C+ G + + LF +M +G+
Sbjct: 363 KRGDIRAASKFFYEMHSRD----ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 229 PDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINS 288
PD+ + LI YC A G+ A +H + C P+V++Y ++I+
Sbjct: 419 PDSVTFTELINGYCKA-------GHMKDAFRVHNHMIQAG------CSPNVVTYTTLIDG 465
Query: 289 LCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPD 348
LCK+ +D A EL +M G+ P++ Y+S+++G C G I++A KL E+ G D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 349 TSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP---------DNSCI---LEAAE-LFR 395
T +Y TL+++Y K ++++A + EM+ G++P + C+ LE E L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 396 TLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEG 455
+ + T FN LV C L++A ++K + G P+ TY ++ G C
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 456 GIEKAYDLLPDMEEK 470
+++A+ L +M+ K
Sbjct: 646 NMKEAWFLFQEMKGK 660
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 197/432 (45%), Gaps = 48/432 (11%)
Query: 116 IGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTE 175
+G+ + S NI+++ C++ + +A L + K ++PDV++ ++ G C G+ +
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 176 ASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYN 235
K + R + PN Y SII LC+ + + F +M +GI PD VY
Sbjct: 300 V----WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 236 SLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLV 295
+LI +C +G+ AA + E + + PDVL+Y +II+ C+ +
Sbjct: 356 TLIDGFC-------KRGDIRAASKFFYEMHSRD------ITPDVLTYTAIISGFCQIGDM 402
Query: 296 DKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTL 355
+A +LF +M +G+ PD V ++ LI+GYC G + DA ++ + GC P+ +Y TL
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 356 INSYSKIEKVEEALSLYGEMISMGVRPD-------------NSCILEAAELFRTLHNTKF 402
I+ K ++ A L EM +G++P+ + I EA +L
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 403 ELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYD 462
D + L+D CKS + A E+ K++ G +P +VT+ V++ G C+ G +E
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 463 LLPDMEEK-----------------IRECLKAIELLHK-MAKRYVKPDEITVSILEELLN 504
LL M K IR LKA ++K M R V PD T L +
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 505 KDENCHECMNLL 516
K N E L
Sbjct: 643 KARNMKEAWFLF 654
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 163/370 (44%), Gaps = 39/370 (10%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
++ A FF M TP + ++ +++ V L + GL PD V+
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
L+N +CK + DAF +++ SP+VVT LI GLC +G A+ L +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM--- 482
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
+ + PN+ Y SI++GLCK G + + L + + G+ D Y +L+ YC
Sbjct: 483 -WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC---- 537
Query: 247 WEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMK 306
G A E+ +E LG P ++++ ++N C +++ ++L M
Sbjct: 538 ---KSGEMDKAQEILKEM------LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 307 SRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVE 366
++GI P+ ++SL+ YC+ + A ++ + S G PD +Y L+ + K ++
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 367 EALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAW 426
EA L+ EM G F + ++ ++ L+ G K + A
Sbjct: 649 EAWFLFQEMKGKG----------------------FSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 427 ELFKKLPRYG 436
E+F ++ R G
Sbjct: 687 EVFDQMRREG 696
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 138/314 (43%), Gaps = 71/314 (22%)
Query: 254 TSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPD 313
T+ A+ + EF E+GV +V SY +I+ +C+ + +A L L M+ +G PD
Sbjct: 227 TATAIIVFREF----PEVGVCW--NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 314 VVVYSSLIDGYCLMGRIDDARKL-----------------------------------FV 338
V+ YS++++GYC G +D KL F
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 339 SIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD---------NSC--- 386
+ +G +PDT Y TLI+ + K + A + EM S + PD C
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 387 -ILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYT 445
++EA +LF + E D F L++G CK+ ++ A+ + + + G PNVVTYT
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 446 VMICGLCIEGGIEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSILEELLNK 505
+I GLC EG ++ A ELLH+M K ++P+ T + + L K
Sbjct: 461 TLIDGLCKEGDLDSAN-----------------ELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 506 DENCHECMNLLPSF 519
N E + L+ F
Sbjct: 504 SGNIEEAVKLVGEF 517
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 120/315 (38%), Gaps = 54/315 (17%)
Query: 62 KSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPD 121
K G+++ + L + I +QP F ++NS++ L + L GL D
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIF--TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 122 FVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFT 181
V+ LM+ +CK + A L +L K P +VT L+ G C+ G + L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 182 KFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVY 241
+A + PN + S++ C + ++ DM RG+ PD Y +L++ +
Sbjct: 586 WMLA----KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 242 CCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKEL 301
C A N ++A L
Sbjct: 642 CKARNMKEAWF------------------------------------------------L 653
Query: 302 FLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSK 361
F +MK +G V YS LI G+ + +AR++F + EG D ++ ++ K
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713
Query: 362 IEKVEEALSLYGEMI 376
++ + + E+I
Sbjct: 714 GKRPDTIVDPIDEII 728
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 189/417 (45%), Gaps = 33/417 (7%)
Query: 69 NDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNIL 128
+D FF MI P + ++N ++ + + L E + GL+PD V+ N +
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 129 MNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDC 188
++ F K+ + D + PDV+T LI C GK + +
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 189 RPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWE 248
+PNV+ Y++++D CK+G + + ++DM+ G+ P+ + Y SLI C
Sbjct: 364 KPNVVS----YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC------ 413
Query: 249 DAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSR 308
GN S A L GN L V +V++Y ++I+ LC + +A+ELF M +
Sbjct: 414 -KIGNLSDAFRL------GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 309 GIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEA 368
G+IP++ Y++LI G+ +D A +L ++ G PD Y T I +EK+E A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 369 LSLYGEMISMGVRPDNSCIL--------------EAAELFRTLHNTKFELDLTVFNCLVD 414
+ EM G++ NS I E L + E+ + F L+D
Sbjct: 527 KVVMNEMKECGIKA-NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 585
Query: 415 GLCKSWRLRSAWELFKKLPR-YGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
GLCK+ + A + F ++ +G + N +T MI GLC + +E A L M +K
Sbjct: 586 GLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 642
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 152/340 (44%), Gaps = 44/340 (12%)
Query: 184 VAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCC 243
V + R +P + ++ L G + + F MK ++P N L+ +
Sbjct: 180 VLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFA- 238
Query: 244 AVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFL 303
G T ++ + G P V +Y +I+ +CK+ V+ A+ LF
Sbjct: 239 ------KLGKTDDVKRFFKDMI------GAGARPTVFTYNIMIDCMCKEGDVEAARGLFE 286
Query: 304 DMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIE 363
+MK RG++PD V Y+S+IDG+ +GR+DD F ++ C PD +YN LIN + K
Sbjct: 287 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 364 KVEEALSLYGEMISMGVRP---------DNSC----ILEAAELFRTLHNTKFELDLTVFN 410
K+ L Y EM G++P D C + +A + + + + +
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 411 CLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE- 469
L+D CK L A+ L ++ + G E NVVTYT +I GLC +++A +L M+
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 470 -----------------KIRECLKAIELLHKMAKRYVKPD 492
K + +A+ELL+++ R +KPD
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 161/394 (40%), Gaps = 75/394 (19%)
Query: 71 ALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMN 130
L F+ M P + S+++L+ A + I + +GL+P+ + L++
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 131 CFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRP 190
CK+ +SDAF +L+ +VVT LI GLC + EA LF K
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT----A 466
Query: 191 NVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDA 250
VIPN+ Y ++I G K +++ L ++KGRGI PD +Y + I C E A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 251 K----------------------------GNTSAALELHEEFVNGNGELGVI-------- 274
K GN + L L +E + E+ V+
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 275 -CHPDVLS---------------------YCSIINSLCKDVLVDKAKELFLDMKSRGIIP 312
C ++S + ++I+ LCKD V+ A LF M +G++P
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 313 DVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLY 372
D Y+SL+DG G + +A L + G D +Y +L+ S ++++A S
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFL 706
Query: 373 GEMISMGVRPDN-------------SCILEAAEL 393
EMI G+ PD CI EA EL
Sbjct: 707 EEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 194/420 (46%), Gaps = 32/420 (7%)
Query: 62 KSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPD 121
K G++E +AL ++ +P + +N+L+ +L + + L +R+ IGL P+
Sbjct: 344 KRGKIE--EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 122 FVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFT 181
V+ +IL++ FC+ + A LG ++ V LI G C G + A G
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 182 KFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVY 241
+ + + P V+ Y S++ G C G +NK L+ +M G+GI P + + +L+
Sbjct: 462 EMI----NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 242 CCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKEL 301
A G A++L E N P+ ++Y +I C++ + KA E
Sbjct: 518 FRA-------GLIRDAVKLFNEMAEWN------VKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 302 FLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSK 361
+M +GI+PD Y LI G CL G+ +A+ + C + Y L++ + +
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 362 IEKVEEALSLYGEMISMGVRPDNSC---ILEAA----------ELFRTLHNTKFELDLTV 408
K+EEALS+ EM+ GV D C +++ + L + +H+ + D +
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 409 FNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDME 468
+ ++D K+ + A+ ++ + G PN VTYT +I GLC G + +A L M+
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 167/399 (41%), Gaps = 51/399 (12%)
Query: 113 LNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGK 172
+ + LLP+ +L+ L++ K A ++ PDV +IR LC
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 173 FTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAF 232
+ A + A C N++P Y +IDGLCK V + + D+ G+ + PD
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
Query: 233 VYNSLIRVYCCAVNWE----------------------------DAKGNTSAALELHEEF 264
Y +L+ C +E +G AL L +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 265 VNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGY 324
V + GV P++ Y ++I+SLCK +A+ LF M G+ P+ V YS LID +
Sbjct: 359 V----DFGV--SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 325 CLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP-- 382
C G++D A + G YN+LIN + K + A EMI+ + P
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 383 -----------DNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKK 431
I +A L+ + + F L+ GL ++ +R A +LF +
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 432 LPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
+ + +PN VTY VMI G C EG + KA++ L +M EK
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 189/438 (43%), Gaps = 78/438 (17%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
++N AL ++ M P + +F +LL L + + L + + P+ V+ N
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
+++ +C+ +S AF L + K PD + LI GLC+ G+ +EA FV
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK----VFVDG 602
Query: 187 DCRPNVIPNVICYASIIDGLCKDG-------------------------------FVNKV 215
+ N N ICY ++ G C++G +K
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 216 RVLFL----DMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGEL 271
R LF +M RG+ PD +Y S+I DAK T + E F + +
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMI----------DAKSKTG---DFKEAFGIWDLMI 709
Query: 272 GVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRID 331
C P+ ++Y ++IN LCK V++A+ L M+ +P+ V Y +D G +D
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVD 768
Query: 332 --DARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILE 389
A +L +I +G + +T++YN LI + + ++EEA L MI GV PD CI
Sbjct: 769 MQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD--CI-- 823
Query: 390 AAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMIC 449
+ +++ LC+ ++ A EL+ + G P+ V Y +I
Sbjct: 824 ------------------TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIH 865
Query: 450 GLCIEGGIEKAYDLLPDM 467
G C+ G + KA +L +M
Sbjct: 866 GCCVAGEMGKATELRNEM 883
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 17/268 (6%)
Query: 117 GLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEA 176
G+ D V +L++ K F L + + PD V +I G F EA
Sbjct: 642 GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 177 SGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNS 236
G++ + C +PN + Y ++I+GLCK GFVN+ VL M+ P+ Y
Sbjct: 702 FGIWDLMINEGC----VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 237 LIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVD 296
+ + + + A+ELH + G + +Y +I C+ ++
Sbjct: 758 FLDILT------KGEVDMQKAVELHNAILKG-------LLANTATYNMLIRGFCRQGRIE 804
Query: 297 KAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLI 356
+A EL M G+ PD + Y+++I+ C + A +L+ S+ +G PD +YNTLI
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Query: 357 NSYSKIEKVEEALSLYGEMISMGVRPDN 384
+ ++ +A L EM+ G+ P+N
Sbjct: 865 HGCCVAGEMGKATELRNEMLRQGLIPNN 892
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 31/214 (14%)
Query: 317 YSSLIDGYCLMGRIDDARKLF-VSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEM 375
+ LI Y R+ D +F + I +P+ + + L++ K A+ L+ +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 376 ISMGVRPD---------NSCILE----AAELFRTLHNTKFELDLTVFNCLVDGLCKSWRL 422
+S+G+RPD + C L+ A E+ + T ++++ +N L+DGLCK ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 423 RSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIRECLKAIELLH 482
A + K L +P+VVTY ++ GLC K++E +E++
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLC-----------------KVQEFEIGLEMMD 321
Query: 483 KMAKRYVKPDEITVSILEELLNKDENCHECMNLL 516
+M P E VS L E L K E +NL+
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV 355
>sp|Q8L6Y3|PP396_ARATH Pentatricopeptide repeat-containing protein At5g24830
OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1
Length = 593
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 200/415 (48%), Gaps = 26/415 (6%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
+L+ AL MI+ P + + N LL L Y L + +G P+ VS N
Sbjct: 136 KLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYN 195
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
L+ C + V A + + P+ VT ++ LC +G + + +
Sbjct: 196 TLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILD 255
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
+ N +++ ++D K+G V + ++ +M + + D+ VYN +IR C
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLC---- 311
Query: 247 WEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMK 306
+ GN AA + V + GV +PDV +Y ++I++LCK+ D+A +L M+
Sbjct: 312 ---SSGNMVAAYGFMCDMV----KRGV--NPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 307 SRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVE 366
+ G+ PD + Y +I G C+ G ++ A + +S+ +P+ +N +I+ Y +
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 367 EALSLYGEMISMGVRP----DNSCI---------LEAAELFRTLHNTKFELDLTVFNCLV 413
ALS+ M+S GV+P +N+ I ++A + + +TK D T +N L+
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482
Query: 414 DGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDME 468
C LR A++L+ ++ R G +P+++TYT ++ GLC +G ++KA LL ++
Sbjct: 483 GAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQ 537
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 182/404 (45%), Gaps = 38/404 (9%)
Query: 62 KSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPD 121
K+G +E D L M M P+P S+N+L+ L + L +N G+ P+
Sbjct: 168 KAGYIEKADGL--VREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPN 225
Query: 122 FVSLNILMNCFCK--MIGVSDAFVALGRIL--RKVFSP-DVVTLGCLIRGLCMQGKFTEA 176
V+ NI+++ C+ +IG ++ + L IL + +P D+V L+ G +A
Sbjct: 226 RVTCNIIVHALCQKGVIGNNNKKL-LEEILDSSQANAPLDIVICTILMDSCFKNGNVVQA 284
Query: 177 SGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNS 236
++ + + NV + + Y II GLC G + DM RG+ PD F YN+
Sbjct: 285 LEVWKEM----SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNT 340
Query: 237 LIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVD 296
LI C +G A +LH NG GV PD +SY II LC V+
Sbjct: 341 LISALC-------KEGKFDEACDLHGTMQNG----GVA--PDQISYKVIIQGLCIHGDVN 387
Query: 297 KAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLI 356
+A E L M ++P+V++++ +IDGY G A + + S G P+ + N LI
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Query: 357 NSYSKIEKVEEALSLYGEMISMGVRPDNS---------CILE----AAELFRTLHNTKFE 403
+ Y K ++ +A + EM S + PD + C L A +L+ + +
Sbjct: 448 HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ 507
Query: 404 LDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVM 447
D+ + LV GLC RL+ A L ++ G + V + ++
Sbjct: 508 PDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLIL 551
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 43/302 (14%)
Query: 163 LIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDM 222
++R LC+QGK A L K + VIP +I + +++GLCK G++ K L +M
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIY----SGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 223 KGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSY 282
+ G P+ YN+LI+ C +VN N AL L N + G+ P+ ++
Sbjct: 183 REMGPSPNCVSYNTLIKGLC-SVN------NVDKALYL----FNTMNKYGI--RPNRVTC 229
Query: 283 CSIINSLC-KDVLVDKAKELF---LDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFV 338
I+++LC K V+ + K+L LD D+V+ + L+D G + A +++
Sbjct: 230 NIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWK 289
Query: 339 SIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLH 398
+ + D+ YN +I + A +M+ GV PD
Sbjct: 290 EMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPD--------------- 334
Query: 399 NTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIE 458
+ +N L+ LCK + A +L + G P+ ++Y V+I GLCI G +
Sbjct: 335 -------VFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 459 KA 460
+A
Sbjct: 388 RA 389
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 40/290 (13%)
Query: 121 DFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLF 180
D V N+++ C + A+ + ++++ +PDV T LI LC +GKF EA L
Sbjct: 299 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLH 358
Query: 181 TKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRV 240
V P+ I Y II GLC G VN+ L M + P+ ++N +I
Sbjct: 359 GTMQ----NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Query: 241 YCCAVNWEDAKGNTSAALE-------------------LHEEFVNG----------NGEL 271
Y G+TS+AL L +V G N
Sbjct: 415 Y-------GRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMR 467
Query: 272 GVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRID 331
HPD +Y ++ + C + A +L+ +M RG PD++ Y+ L+ G C GR+
Sbjct: 468 STKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLK 527
Query: 332 DARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVR 381
A L I++ G D + L Y+++++ EA +Y + ++ R
Sbjct: 528 KAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNR 577
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 30/253 (11%)
Query: 233 VYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKD 292
+++S++R C +G AAL L ++ + GVI P ++++ ++N LCK
Sbjct: 123 IHSSIMRDLC-------LQGKLDAALWLRKKMIYS----GVI--PGLITHNHLLNGLCKA 169
Query: 293 VLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSY 352
++KA L +M+ G P+ V Y++LI G C + +D A LF ++ G P+ +
Sbjct: 170 GYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTC 229
Query: 353 NTLI-----------NSYSKIEKVEEA------LSLYGEMISMGVRPDNSCILEAAELFR 395
N ++ N+ +E++ ++ L + I M N +++A E+++
Sbjct: 230 NIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWK 289
Query: 396 TLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEG 455
+ D V+N ++ GLC S + +A+ + + G P+V TY +I LC EG
Sbjct: 290 EMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEG 349
Query: 456 GIEKAYDLLPDME 468
++A DL M+
Sbjct: 350 KFDEACDLHGTMQ 362
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
+ + AL N M+ P + + N+L+ ++ + + + + PD + N
Sbjct: 420 DTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYN 479
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
+L+ C + + AF +LR+ PD++T L+RGLC +G+ +A L ++ A
Sbjct: 480 LLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQAT 539
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGI 227
+ +P +I A L + G V +L + RG+
Sbjct: 540 GITIDHVPFLI-LAKKYTRLQRPGEAYLVYKKWLATRNRGV 579
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 220/486 (45%), Gaps = 47/486 (9%)
Query: 65 EVELNDALCFFNYMI-HMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFV 123
E +L DAL M+ + P ++N++L A++ K + L + GL+P+ V
Sbjct: 217 EGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRV 276
Query: 124 SLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKF 183
+ N L+ +CK+ + +AF + + + PD+ T LI GLC G E L
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 184 VAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCC 243
+ + P+V+ Y ++IDG + G + R L M+ G+ + +N
Sbjct: 337 KSLKLQ----PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN-------I 385
Query: 244 AVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFL 303
++ W + A +E V+ +G PD+++Y ++I + K + A E+
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHG-----FSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 304 DMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIE 363
+M +GI + + ++++D C ++D+A L S G I D +Y TLI + + E
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500
Query: 364 KVEEALSLYGEMISMGVRPD----NSCILE---------AAELFRTLHNTKFELDLTVFN 410
KVE+AL ++ EM + + P NS I A E F L + D + FN
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560
Query: 411 CLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE- 469
++ G CK R+ A+E + + ++ +P+ T +++ GLC EG EKA + + E
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE 620
Query: 470 ----------------KIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECM 513
K ++ +A +LL +M ++ ++PD T + LL +D E
Sbjct: 621 REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETD 680
Query: 514 NLLPSF 519
LL F
Sbjct: 681 ELLKKF 686
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 218/518 (42%), Gaps = 90/518 (17%)
Query: 79 IHMQPTPFMPSFNSLLGAL--AGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKM- 135
+H+ P P F+ L A GK + + + +++ + L P+ ++ N L+ +
Sbjct: 123 LHLSPPPSKALFDIALSAYLHEGKPHVA--LQIFQKMIRLKLKPNLLTCNTLLIGLVRYP 180
Query: 136 --IGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVI 193
+S A +++ S +V T L+ G C++GK +A G+ + V+ V
Sbjct: 181 SSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS---EFKVN 237
Query: 194 PNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGN 253
P+ + Y +I+ + K G ++ ++ L LDMK G+ P+ YN+L+ YC G+
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYC-------KLGS 290
Query: 254 TSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPD 313
A ++ E N PD+ +Y +IN LC + + EL MKS + PD
Sbjct: 291 LKEAFQIVELMKQTN------VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD 344
Query: 314 VVVYSSLIDGYCLMGRIDDARKLFVSIESEGC---------------------------- 345
VV Y++LIDG +G +ARKL +E++G
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 346 --------IPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDN---SCIL------ 388
PD +Y+TLI +Y K+ + AL + EM G++ + + IL
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 389 ----EAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTY 444
EA L + H F +D + L+ G + ++ A E++ ++ + P V T+
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524
Query: 445 TVMICGLCIEGGIEKAYD---------LLPDMEE---------KIRECLKAIELLHKMAK 486
+I GLC G E A + LLPD K KA E ++ K
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK 584
Query: 487 RYVKPDEITVSILEELLNKDENCHECMNLLPSFLSRNQ 524
KPD T +IL L K+ + +N + + +
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE 622
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 119/275 (43%), Gaps = 30/275 (10%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVS 124
E ++ AL ++ M ++ TP + +FNSL+G L + + L GLLPD +
Sbjct: 499 EEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDST 558
Query: 125 LNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFV 184
N ++ +CK V AF ++ F PD T L+ GLC +G +A F +
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Query: 185 AFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCA 244
+ + Y ++I CKD + + L +M+ +G+ PD F YNS I +
Sbjct: 619 E-----EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL--- 670
Query: 245 VNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLD 304
ED G S EL ++F +G+ G S+ +D+ V+ K
Sbjct: 671 --MED--GKLSETDELLKKF---SGKFG---------------SMKRDLQVETEKNPATS 708
Query: 305 MKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVS 339
+ + + YS +ID C GR+ + + + S
Sbjct: 709 ESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYTS 743
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 166/358 (46%), Gaps = 39/358 (10%)
Query: 111 ERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQ 170
E + G+LP+ + + +++ +CK V A+ IL P+VV G L+ G C
Sbjct: 258 ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA 317
Query: 171 GKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPD 230
+ A LF V F V PN+ Y +I G CK G + + L +M+ + PD
Sbjct: 318 RELVTARSLFVHMVKF----GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 231 AFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLC 290
F Y LI C ED + A L ++ N P +Y S+I+ C
Sbjct: 374 VFTYTILINGLCI----ED---QVAEANRLFQKMKNER------IFPSSATYNSLIHGYC 420
Query: 291 KDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTS 350
K+ +++A +L +M + G+ P+++ +S+LIDGYC + I A L+ + +G +PD
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 351 SYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFN 410
+Y LI+++ K ++EAL LY +M+ G+ P++ F
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH----------------------TFA 518
Query: 411 CLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDME 468
CLVDG K RL A + +++ + N V +T +I GLC G I +A DM
Sbjct: 519 CLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMR 576
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 181/389 (46%), Gaps = 39/389 (10%)
Query: 81 MQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSD 140
M+ +P + S+L L ++ + + + + + GL+PD +L C K S
Sbjct: 158 MKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSK 217
Query: 141 AFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYA 200
L + P+V I LC K EA +F + V+PN+ Y+
Sbjct: 218 KEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK----KHGVLPNLYTYS 273
Query: 201 SIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALEL 260
++IDG CK G V + L+ ++ + P+ V+ +L+ +C A A+ +L +
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTAR-----SLFV 328
Query: 261 HEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSL 320
H + GV P++ Y +I+ CK + +A L +M+S + PDV Y+ L
Sbjct: 329 HMV------KFGV--DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 321 IDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGV 380
I+G C+ ++ +A +LF +++E P +++YN+LI+ Y K +E+AL L EM + GV
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV 440
Query: 381 RPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPN 440
P+ + F+ L+DG C +++A L+ ++ G P+
Sbjct: 441 EPN----------------------IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Query: 441 VVTYTVMICGLCIEGGIEKAYDLLPDMEE 469
VVTYT +I E +++A L DM E
Sbjct: 479 VVTYTALIDAHFKEANMKEALRLYSDMLE 507
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 169/374 (45%), Gaps = 44/374 (11%)
Query: 178 GLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSL 237
GLF + + P+ SI++GL + + V V + M RG+ PD +Y L
Sbjct: 146 GLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVL 205
Query: 238 IRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDK 297
+ CC +G S +L +E + LG+ P+V Y I LC+D +++
Sbjct: 206 FQ--CCF-----KQGLYSKKEKLLDEMTS----LGI--KPNVYIYTIYILDLCRDNKMEE 252
Query: 298 AKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLIN 357
A+++F MK G++P++ YS++IDGYC G + A L+ I +P+ + TL++
Sbjct: 253 AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 358 SYSKIEKVEEALSLYGEMISMGVRPD-------------NSCILEAAELFRTLHNTKFEL 404
+ K ++ A SL+ M+ GV P+ + +LEA L + +
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSP 372
Query: 405 DLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLL 464
D+ + L++GLC ++ A LF+K+ P+ TY +I G C E +E+A DL
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 465 PDMEE------------------KIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKD 506
+M +R+ A+ L +M + + PD +T + L + K+
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 507 ENCHECMNLLPSFL 520
N E + L L
Sbjct: 493 ANMKEALRLYSDML 506
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 138/323 (42%), Gaps = 61/323 (18%)
Query: 118 LLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEAS 177
LLP+ V L++ FCK + A +++ P++ CLI G C G EA
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAV 359
Query: 178 GLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSL 237
GL ++ + N+ P+V Y +I+GLC + V + LF MK I+P + YNSL
Sbjct: 360 GLLSEMESL----NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415
Query: 238 IRVYCCAVNWEDA----KGNTSAALE----LHEEFVNG-------NGELGVICH------ 276
I YC N E A T++ +E ++G +G+
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475
Query: 277 -PDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPD---------------------- 313
PDV++Y ++I++ K+ + +A L+ DM GI P+
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 314 -------------VVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYS 360
V ++ LI+G C G I A + F + S G PD SY +++ +
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595
Query: 361 KIEKVEEALSLYGEMISMGVRPD 383
+ +++ + + L +MI G+ P+
Sbjct: 596 QEKRITDTMMLQCDMIKTGILPN 618
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 207/457 (45%), Gaps = 69/457 (15%)
Query: 78 MIHMQPTPFMPSFNSLLGALAGKKYYVN--FICLSER----LNTIGLLPDFVSLNILMNC 131
M+ P +N L+G++ G K +N + L+E+ + G++ + ++++ C
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 132 FCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPN 191
C AF + ++ + F PD T ++ LC K A LF + R
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK----RGG 513
Query: 192 VIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAK 251
++ +V Y ++D CK G + + R F +M+ G P+ Y +LI Y A
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA------- 566
Query: 252 GNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGII 311
S A EL E ++ C P++++Y ++I+ CK V+KA ++F M +
Sbjct: 567 KKVSYANELFETMLSEG------CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620
Query: 312 PDV----------------VVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTL 355
PDV V Y +L+DG+C R+++ARKL ++ EGC P+ Y+ L
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 356 INSYSKIEKVEEALSLYGEMISMGVRPD---NSCILE----------AAELFRTLHNTKF 402
I+ K+ K++EA + EM G S +++ A+++ +
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 403 ELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYD 462
++ ++ ++DGLCK + A++L + + G +PNVVTYT MI G + G
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG------- 793
Query: 463 LLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSIL 499
KI CL ELL +M + V P+ +T +L
Sbjct: 794 -------KIETCL---ELLERMGSKGVAPNYVTYRVL 820
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 195/440 (44%), Gaps = 52/440 (11%)
Query: 62 KSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGAL--AGKKYYVNFICLSERLNTIGLL 119
K+G +E A +FN M + TP + ++ +L+ A A K Y N L E + + G L
Sbjct: 530 KAGLIE--QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE--LFETMLSEGCL 585
Query: 120 PDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDV----------------VTLGCL 163
P+ V+ + L++ CK V A R+ PDV VT G L
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 164 IRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMK 223
+ G C + EA L C PN I Y ++IDGLCK G +++ + + +M
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQI----VYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 224 GRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYC 283
G + Y+SLI Y + A S LE C P+V+ Y
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS-------------CAPNVVIYT 748
Query: 284 SIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESE 343
+I+ LCK D+A +L M+ +G P+VV Y+++IDG+ ++G+I+ +L + S+
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 344 GCIPDTSSYNTLINSYSKIEKVEEALSLYGEM-------ISMGVRPD----NSCILEAAE 392
G P+ +Y LI+ K ++ A +L EM + G R N +E+
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 868
Query: 393 LFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPE--PNVVTYTVMICG 450
L + L+V+ L+D L K+ RL A L +++ + TY +I
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928
Query: 451 LCIEGGIEKAYDLLPDMEEK 470
LC+ +E A+ L +M +K
Sbjct: 929 LCLANKVETAFQLFSEMTKK 948
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 178/425 (41%), Gaps = 61/425 (14%)
Query: 86 FMPS---FNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFC---KMIGVS 139
F+P + L+ L + + R+ LP+ V+ + L+ C C K +G
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL-CGCLNKKQLGRC 356
Query: 140 DAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICY 199
L ++ + P L+ C G + A L K V + +P + Y
Sbjct: 357 KR--VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV----KCGHMPGYVVY 410
Query: 200 ASIIDGLCKD------GFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGN 253
+I +C D ++ + +M G+ + +S R C A +E
Sbjct: 411 NILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE----- 465
Query: 254 TSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPD 313
A + E + G G + PD +Y ++N LC ++ A LF +MK G++ D
Sbjct: 466 --KAFSVIREMI-GQGFI-----PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 314 VVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYG 373
V Y+ ++D +C G I+ ARK F + GC P+ +Y LI++Y K +KV A L+
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 374 EMISMGVRP---------DNSC----ILEAAELFRTLHNTKFELD--------------- 405
M+S G P D C + +A ++F + +K D
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 406 -LTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLL 464
+ + L+DG CKS R+ A +L + G EPN + Y +I GLC G +++A ++
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 465 PDMEE 469
+M E
Sbjct: 698 TEMSE 702
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 174/384 (45%), Gaps = 43/384 (11%)
Query: 110 SERLNTIGLLPDFVSL-NILMN-----CFC-KMIGVSDAFVALGRILRKVFSPDVVTLGC 162
++RL++ L+ +SL N+ M+ CF + V AL + + F PD V
Sbjct: 248 ADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTK 307
Query: 163 LIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDM 222
LI GLC F EA + A C +PNV+ Y++++ G + + + + M
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSC----LPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363
Query: 223 KGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSY 282
G YP ++NSL+ YC + G+ S A +L ++ V G + P + Y
Sbjct: 364 MMEGCYPSPKIFNSLVHAYCTS-------GDHSYAYKLLKKMVKC-GHM-----PGYVVY 410
Query: 283 CSIINSLCKDV------LVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKL 336
+I S+C D L+D A++ + +M + G++ + + SS C G+ + A +
Sbjct: 411 NILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV 470
Query: 337 FVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD------------- 383
+ +G IPDTS+Y+ ++N K+E A L+ EM G+ D
Sbjct: 471 IREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK 530
Query: 384 NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVT 443
I +A + F + ++ + L+ K+ ++ A ELF+ + G PN+VT
Sbjct: 531 AGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 590
Query: 444 YTVMICGLCIEGGIEKAYDLLPDM 467
Y+ +I G C G +EKA + M
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERM 614
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 32/252 (12%)
Query: 145 LGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIID 204
L ++L +P+VV +I GLC GK EA L C+PNV+ Y ++ID
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT----YTAMID 787
Query: 205 GLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCC----------------AVNWE 248
G G + L M +G+ P+ Y LI +CC +W
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID-HCCKNGALDVAHNLLEEMKQTHWP 846
Query: 249 DAKGNTSAALE-LHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMK- 306
+E ++EF+ G L I D + S+ L +++ KA+ L + ++
Sbjct: 847 THTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLI--KAQRLEMALRL 904
Query: 307 -------SRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSY 359
S ++ Y+SLI+ CL +++ A +LF + +G IP+ S+ +LI
Sbjct: 905 LEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Query: 360 SKIEKVEEALSL 371
+ K+ EAL L
Sbjct: 965 FRNSKISEALLL 976
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 142/364 (39%), Gaps = 74/364 (20%)
Query: 160 LGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLF 219
L L+R C G F+ A + F RP+ Y +I K ++ ++
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRST----YNCLIQAFLKADRLDSASLIH 258
Query: 220 LDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDV 279
+M + D F C W +A L E FV PD
Sbjct: 259 REMSLANLRMDGFTLRCFAYSLCKVGKWREA-----LTLVETENFV-----------PDT 302
Query: 280 LSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVS 339
+ Y +I+ LC+ L ++A + M++ +P+VV YS+L+ G ++ +++
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 362
Query: 340 IESEGCIPDTSSYNTLINSY-------------SKIEK---------------------- 364
+ EGC P +N+L+++Y K+ K
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 365 ------VEEALSLYGEMISMGVRPD-------NSCILEAAE------LFRTLHNTKFELD 405
++ A Y EM++ GV + C+ A + + R + F D
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 406 LTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLP 465
+ ++ +++ LC + ++ A+ LF+++ R G +V TYT+M+ C G IE+A
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 466 DMEE 469
+M E
Sbjct: 543 EMRE 546
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 194/435 (44%), Gaps = 48/435 (11%)
Query: 111 ERLNTIGLLPDFVSLNIL-MNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCM 169
+ ++ G++PD S ++ + CF + + +A L ++++ F PD T ++ LC
Sbjct: 206 DEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCE 264
Query: 170 QGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYP 229
G A F K + +PN+I + S+IDGLCK G + + + +M G P
Sbjct: 265 NGLVNRAIWYFRKMIDLGFKPNLIN----FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 320
Query: 230 DAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSL 289
+ + + +LI C +G T A L + V + P+V +Y S+I
Sbjct: 321 NVYTHTALIDGLC-------KRGWTEKAFRLFLKLVRSD-----TYKPNVHTYTSMIGGY 368
Query: 290 CKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDT 349
CK+ +++A+ LF MK +G+ P+V Y++LI+G+C G A +L + EG +P+
Sbjct: 369 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNI 428
Query: 350 SSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDN---------SC----ILEAAELFRT 396
+YN I+S K + EA L + S G+ D C I +A F
Sbjct: 429 YTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCR 488
Query: 397 LHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGG 456
++ T FE D+ + N L+ C+ +++ + LF+ + G P TYT MI C EG
Sbjct: 489 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 548
Query: 457 IEKAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKDENCHECMNLL 516
I DL A++ H M + PD T L L K E L
Sbjct: 549 I----DL-------------ALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 591
Query: 517 PSFLSRNQEESKLTR 531
+ + R ++TR
Sbjct: 592 EAMIDRGLSPPEVTR 606
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 144/337 (42%), Gaps = 44/337 (13%)
Query: 162 CLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLD 221
C++R G+ EA G+ + P+ I +++ + G + +F +
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQ----NQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 222 MKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGE----LGVICH- 276
M RG+ PD+ Y + V C + + + + + F+ N L +C
Sbjct: 208 MSVRGVVPDSSSYK--LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCEN 265
Query: 277 -------------------PDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVY 317
P+++++ S+I+ LCK + +A E+ +M G P+V +
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH 325
Query: 318 SSLIDGYCLMGRIDDARKLFVS-IESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMI 376
++LIDG C G + A +LF+ + S+ P+ +Y ++I Y K +K+ A L+ M
Sbjct: 326 TALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Query: 377 SMGVRPDNSCIL-------------EAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLR 423
G+ P+ + A EL + + F ++ +N +D LCK R
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 424 SAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKA 460
A+EL K G E + VTYT++I C + I +A
Sbjct: 446 EAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 295 VDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNT 354
+++A + +DM+++G+ P + + +++ +G I+ A +F + G +PD+SSY
Sbjct: 163 LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 222
Query: 355 LINSYSKIEKVEEALSLYGEMISMGVRPDN-SCIL------------EAAELFRTLHNTK 401
++ + K++EA MI G PDN +C L A FR + +
Sbjct: 223 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 282
Query: 402 FELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAY 461
F+ +L F L+DGLCK ++ A+E+ +++ R G +PNV T+T +I GLC G EKA+
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 462 DLL 464
L
Sbjct: 343 RLF 345
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 151/387 (39%), Gaps = 46/387 (11%)
Query: 85 PFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVA 144
P + ++ S++G + L R+ GL P+ + L+N CK A+
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 145 LGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIID 204
+ + + F P++ T I LC + + EA L K AF C + + + Y +I
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK--AFSC--GLEADGVTYTILIQ 471
Query: 205 GLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEF 264
CK +N+ F M G D + N LI +C ++ E
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC-----------RQKKMKESERL 520
Query: 265 VNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGY 324
LG+I P +Y S+I+ CK+ +D A + F +MK G +PD Y SLI G
Sbjct: 521 FQLVVSLGLI--PTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578
Query: 325 CLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDN 384
C +D+A KL+ ++ G P + TL Y K A+ L + P
Sbjct: 579 CKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL--------LEP-- 628
Query: 385 SCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTY 444
L+ RT+ LV LC ++ A F+KL + VT
Sbjct: 629 ---LDKKLWIRTVRT------------LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTL 673
Query: 445 TVMICGLCIEGGIEKAYDLLPDMEEKI 471
C E G +L+ D+ E+I
Sbjct: 674 AAFTTA-CSESGKN---NLVTDLTERI 696
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 212/455 (46%), Gaps = 63/455 (13%)
Query: 62 KSGEVELNDALCFFNYMIHMQPTPFMPSFNSLL-GALAGKKYYVNFICLSERLNTIGLLP 120
K+GE+E AL F+ M + TP + ++++ G L G+K+ E T GL
Sbjct: 386 KNGEME--KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET-GLAN 442
Query: 121 DFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLF 180
FV N +++ CK +A L ++ + P+VV+ ++ G C Q A +F
Sbjct: 443 VFVC-NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 181 TKFVAFDCRPN-------------------------------VIPNVICYASIIDGLCKD 209
+ + +PN + N + Y +II+GLCK
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKV 561
Query: 210 GFVNKVRVLFLDM-KGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGN 268
G +K R L +M + + + YNS+I + +G +A+ +EE GN
Sbjct: 562 GQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF-------KEGEMDSAVAAYEEMC-GN 613
Query: 269 GELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMG 328
G P+V++Y S++N LCK+ +D+A E+ +MK++G+ D+ Y +LIDG+C
Sbjct: 614 G-----ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 329 RIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPD----- 383
++ A LF + EG P YN+LI+ + + + AL LY +M+ G+R D
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 384 --------NSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRY 435
+ ++ A+EL+ + D ++ +V+GL K + ++F+++ +
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 436 GPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
PNV+ Y +I G EG +++A+ L +M +K
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 193/485 (39%), Gaps = 81/485 (16%)
Query: 60 NSKSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLL 119
N+ S + + + A+ N M+ + PF P N L AL + L R+ IG+
Sbjct: 171 NAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVD 230
Query: 120 PDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGL 179
D V+ +LM + ++A L R + + PD + ++ C A+ L
Sbjct: 231 GDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSL 290
Query: 180 FTKFVAFD-CRPN-------------------------------VIPNVICYASIIDGLC 207
+ C P+ + NV+ S+I G C
Sbjct: 291 LREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC 350
Query: 208 KDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALEL------- 260
K+ + VLF M+ G P++ ++ LI W G ALE
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE-------WFRKNGEMEKALEFYKKMEVL 403
Query: 261 ---------------------HEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAK 299
HEE + E +V +I++ LCK D+A
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEAT 463
Query: 300 ELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSY 359
EL M+SRGI P+VV Y++++ G+C +D AR +F +I +G P+ +Y+ LI+
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523
Query: 360 SKIEKVEEALSLYGEMISMGVRPDNSC----------ILEAAELFRTLHNTKFELDLTV- 408
+ + AL + M S + + + + ++ L N E L V
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 409 ---FNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLP 465
+N ++DG K + SA ++++ G PNV+TYT ++ GLC +++A ++
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 466 DMEEK 470
+M+ K
Sbjct: 644 EMKNK 648
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 131/268 (48%), Gaps = 25/268 (9%)
Query: 123 VSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEA----SG 178
+S N +++ F K + A A + SP+V+T L+ GLC + +A
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 179 LFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLI 238
+ K V D IP Y ++IDG CK + LF ++ G+ P +YNSLI
Sbjct: 645 MKNKGVKLD-----IP---AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Query: 239 RVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKA 298
+ GN AAL+L+++ + G+ C D+ +Y ++I+ L KD + A
Sbjct: 697 SGFRNL-------GNMVAALDLYKKMLKD----GLRC--DLGTYTTLIDGLLKDGNLILA 743
Query: 299 KELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINS 358
EL+ +M++ G++PD ++Y+ +++G G+ K+F ++ P+ YN +I
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Query: 359 YSKIEKVEEALSLYGEMISMGVRPDNSC 386
+ + ++EA L+ EM+ G+ PD +
Sbjct: 804 HYREGNLDEAFRLHDEMLDKGILPDGAT 831
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 180/411 (43%), Gaps = 50/411 (12%)
Query: 124 SLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKF 183
+ N L+N + K A + ++L P + + L + TEA L+++
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224
Query: 184 VAFDCR-PNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYC 242
VA NV ++ AS L ++ + VL ++ RG PD+ +Y+ ++ C
Sbjct: 225 VAIGVDGDNVTTQLLMRAS----LREEKPAEALEVLSRAIE-RGAEPDSLLYSLAVQACC 279
Query: 243 CAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELF 302
++ A S E+ E+ +C P +Y S+I + K +D A L
Sbjct: 280 KTLDLAMA---NSLLREMKEK---------KLCVPSQETYTSVILASVKQGNMDDAIRLK 327
Query: 303 LDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKI 362
+M S GI +VV +SLI G+C + A LF +E EG P++ +++ LI + K
Sbjct: 328 DEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKN 387
Query: 363 EKVEEALSLYGEMISMGVRPD----NSCIL-----EAAELFRTLHNTKFELDLT---VFN 410
++E+AL Y +M +G+ P ++ I + E L + FE L V N
Sbjct: 388 GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCN 447
Query: 411 CLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
++ LCK + A EL K+ G PNVV+Y ++ G C + ++ A + ++ EK
Sbjct: 448 TILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK 507
Query: 471 IRECLKAIELLHKMAKRYVKPDEITVSILEE--LLNKDE-NCHECMNLLPS 518
+KP+ T SIL + N DE N E +N + S
Sbjct: 508 -----------------GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 17/269 (6%)
Query: 89 SFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRI 148
S+NS++ + + + E + G+ P+ ++ LMN CK + A +
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 149 LRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCK 208
K D+ G LI G C + AS LF++ + + P+ Y S+I G
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL----EEGLNPSQPIYNSLISGFRN 701
Query: 209 DGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGN 268
G + L+ M G+ D Y +LI GN A EL+ E
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL-------KDGNLILASELYTEM---- 750
Query: 269 GELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMG 328
+G++ PD + Y I+N L K K ++F +MK + P+V++Y+++I G+ G
Sbjct: 751 QAVGLV--PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808
Query: 329 RIDDARKLFVSIESEGCIPDTSSYNTLIN 357
+D+A +L + +G +PD ++++ L++
Sbjct: 809 NLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 17/259 (6%)
Query: 65 EVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVS 124
E E++ A+ + M +P + ++ SL+ L + + + + G+ D +
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 125 LNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFV 184
L++ FCK + A +L + +P LI G G A L+ K +
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 185 AFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCA 244
R ++ Y ++IDGL KDG + L+ +M+ G+ PD +Y +
Sbjct: 717 KDGLRCDLG----TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI------- 765
Query: 245 VNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLD 304
VN KG +++ EE N P+VL Y ++I ++ +D+A L +
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNN------VTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819
Query: 305 MKSRGIIPDVVVYSSLIDG 323
M +GI+PD + L+ G
Sbjct: 820 MLDKGILPDGATFDILVSG 838
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 335 KLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP------------ 382
KL S +S G ++ ++N L+N+YSK + + A+ + +M+ + V P
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 383 -DNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNV 441
+ + EA EL+ + + D L+ + + A E+ + G EP+
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 442 VTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
+ Y++ + C + A LL +M+EK
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEK 297
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 93/245 (37%), Gaps = 39/245 (15%)
Query: 294 LVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYN 353
LVD AK ++ SR ++ L++ Y + D A + + IP N
Sbjct: 150 LVDSAKSFGFEVNSRA-------FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVN 202
Query: 354 TLINSYSKIEKVEEALSLYGEMISMGVRPDNSCI-------------LEAAELFRTLHNT 400
+++ + + EA LY M+++GV DN EA E+
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER 262
Query: 401 KFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGP-EPNVVTYTVMICGLCIEGGIEK 459
E D +++ V CK+ L A L +++ P+ TYT +I +G ++
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 460 AYDLLPDMEE------------------KIRECLKAIELLHKMAKRYVKPDEITVSILEE 501
A L +M K + + A+ L KM K P+ +T S+L E
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 502 LLNKD 506
K+
Sbjct: 383 WFRKN 387
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 212/463 (45%), Gaps = 51/463 (11%)
Query: 83 PTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCK--MIGVSD 140
P P + +F +L+ + L + + G+ PD ++ + L++ + K M+G+
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 141 AFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYA 200
+ + L K DVV I G AS ++ + + C+ + PNV+ Y
Sbjct: 342 KLFS--QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML---CQ-GISPNVVTYT 395
Query: 201 SIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALEL 260
+I GLC+DG + + ++ + RG+ P Y+SLI +C GN + L
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC-------GNLRSGFAL 448
Query: 261 HEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSL 320
+E+ + ++G PDV+ Y +++ L K L+ A + M + I +VVV++SL
Sbjct: 449 YEDMI----KMGY--PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 321 IDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGV 380
IDG+C + R D+A K+F + G PD +++ T++ ++EEAL L+ M MG+
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 381 RPD--NSCILEAA-----------ELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWE 427
PD C L A +LF + K D+ V N ++ L K R+ A +
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622
Query: 428 LFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEKIRECLKAIELLHKMAKR 487
F L EP++VTY MICG C +++A E+I E LK
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA--------ERIFELLKVTPF------- 667
Query: 488 YVKPDEITVSILEELLNKDENCHECMNLLPSFLSRNQEESKLT 530
P+ +T++IL +L K+ + + + + + + +T
Sbjct: 668 --GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 199/451 (44%), Gaps = 71/451 (15%)
Query: 111 ERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQ 170
+R+ G+ P+ V+ IL+ C+ + +AF G+IL++ P +VT LI G C
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439
Query: 171 GKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPD 230
G L+ + + P+V+ Y ++DGL K G + + M G+ I +
Sbjct: 440 GNLRSGFALYEDMI----KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 231 AFVYNSLIRVYCCAVNWEDA----------------------------KGNTSAALELHE 262
V+NSLI +C +++A +G AL L
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 263 EFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLID 322
++G+ PD L+YC++I++ CK + +LF M+ I D+ V + +I
Sbjct: 556 RMF----KMGL--EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 323 GYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP 382
RI+DA K F ++ PD +YNT+I Y + +++EA ++ E++ +
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFG 668
Query: 383 DNSCILE--------------AAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWEL 428
N+ L A +F + + + + CL+D KS + +++L
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 429 FKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYD---------LLPDMEE---------K 470
F+++ G P++V+Y+++I GLC G +++A + LLPD+ K
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 471 IRECLKAIELLHKMAKRYVKPDEITVSILEE 501
+ ++A L M + VKPD++ L E
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPDDLLQRALSE 819
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 141/318 (44%), Gaps = 17/318 (5%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
++AL F M P + +F +++ + + L R+ +GL PD ++
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
L++ FCK + + + R S D+ +I L + +AS F +
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI-- 628
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVN 246
+ P+++ Y ++I G C +++ +F +K P+ LI V C +
Sbjct: 629 --EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 247 WEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMK 306
+ A S E + P+ ++Y +++ K V ++ + +LF +M+
Sbjct: 687 MDGAIRMFSIMAEKGSK-------------PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 307 SRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVE 366
+GI P +V YS +IDG C GR+D+A +F +PD +Y LI Y K+ ++
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 367 EALSLYGEMISMGVRPDN 384
EA LY M+ GV+PD+
Sbjct: 794 EAALLYEHMLRNGVKPDD 811
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 31/218 (14%)
Query: 281 SYCSIINSLCKDVLVDKAKELFLDM--------------KSRGIIPDVVVYSSLIDGYCL 326
S+ +I + L ++ + D A ++F +M + R + DV + L++ C
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCR 158
Query: 327 MGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSC 386
G +D A ++FV G + S ++NS ++V+ + ++ G+ P
Sbjct: 159 YGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218
Query: 387 --------------ILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKL 432
+ +A + R + F + + N ++ GL ++ A L +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLV 277
Query: 433 PRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
GP PNVVT+ +I G C G +++A+DL ME++
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 207/456 (45%), Gaps = 51/456 (11%)
Query: 78 MIHMQPTPFMPS---FNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCK 134
M M+ + + P+ +N++L K + I L + + + G+ D + N+L++ C+
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 135 MIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIP 194
++ ++ L + +++ P+ VT LI G +GK AS L + ++F + P
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF----GLSP 331
Query: 195 NVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNT 254
N + + ++IDG +G + +F M+ +G+ P Y L+ C ++ A+G
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 391
Query: 255 SAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDV 314
+ NG +C + +Y +I+ LCK+ +D+A L +M GI PD+
Sbjct: 392 MR--------MKRNG----VCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438
Query: 315 VVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGE 374
V YS+LI+G+C +GR A+++ I G P+ Y+TLI + ++ ++EA+ +Y
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498
Query: 375 MISMGVRPDN-------------SCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWR 421
MI G D+ + EA E R + + + F+CL++G S
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558
Query: 422 LRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEE------------ 469
A+ +F ++ + G P TY ++ GLC G + +A L +
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618
Query: 470 ------KIRECLKAIELLHKMAKRYVKPDEITVSIL 499
K KA+ L +M +R + PD T + L
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 654
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 158/364 (43%), Gaps = 30/364 (8%)
Query: 117 GLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEA 176
G P + N ++ K + L +L++ PDV T LI LC +G F ++
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212
Query: 177 SGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNS 236
S L K + P ++ Y +++ CK G L MK +G+ D YN
Sbjct: 213 SYLMQKME----KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNM 268
Query: 237 LIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVD 296
LI C + AKG ++ + + HP+ ++Y ++IN + V
Sbjct: 269 LIHDLCRSNRI--AKGYL-LLRDMRKRMI----------HPNEVTYNTLINGFSNEGKVL 315
Query: 297 KAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLI 356
A +L +M S G+ P+ V +++LIDG+ G +A K+F +E++G P SY L+
Sbjct: 316 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 375
Query: 357 NSYSKIEKVEEALSLYGEMISMGV-------------RPDNSCILEAAELFRTLHNTKFE 403
+ K + + A Y M GV N + EA L + +
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 435
Query: 404 LDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDL 463
D+ ++ L++G CK R ++A E+ ++ R G PN + Y+ +I C G +++A +
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495
Query: 464 LPDM 467
M
Sbjct: 496 YEAM 499
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 169/401 (42%), Gaps = 40/401 (9%)
Query: 68 LNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNI 127
L +A+ + MI T +FN L+ +L + + G+LP+ VS +
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 128 LMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFD 187
L+N + AF + + P T G L++GLC G EA A
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV- 607
Query: 188 CRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNW 247
P + V+ Y +++ +CK G + K LF +M R I PD++ Y SLI C
Sbjct: 608 --PAAVDTVM-YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC----- 659
Query: 248 EDAKGNTSAALELHEEF-VNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMK 306
KG T A+ +E GN P+ + Y ++ + K M
Sbjct: 660 --RKGKTVIAILFAKEAEARGN------VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711
Query: 307 SRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVE 366
+ G PD+V +++IDGY MG+I+ L + ++ P+ ++YN L++ YSK + V
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771
Query: 367 EALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAW 426
+ LY +I G+ PD T H+ LV G+C+S L
Sbjct: 772 TSFLLYRSIILNGILPDK----------LTCHS------------LVLGICESNMLEIGL 809
Query: 427 ELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM 467
++ K G E + T+ ++I C G I A+DL+ M
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 850
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 179/475 (37%), Gaps = 87/475 (18%)
Query: 71 ALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNILMN 130
A F+ M + P ++ SLL L + + L+ + D V N L+
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 131 CFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRP 190
CK ++ A G ++++ PD T LI GLC +GK T + LF K + R
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK-TVIAILFAK--EAEARG 678
Query: 191 NVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDA 250
NV+PN + Y +DG+ K G M G PD N++I Y
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY-------SR 731
Query: 251 KGNTSAALELHEEFVNGNG-----ELGVICH------------------------PDVLS 281
G +L E N NG ++ H PD L+
Sbjct: 732 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 791
Query: 282 YCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMG------------- 328
S++ +C+ +++ ++ RG+ D ++ LI C G
Sbjct: 792 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 851
Query: 329 ----------------------RIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVE 366
R ++R + + +G P++ Y LIN ++ ++
Sbjct: 852 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 911
Query: 367 EALSLYGEMISMGVRPDN---SCIL----------EAAELFRTLHNTKFELDLTVFNCLV 413
A + EMI+ + P N S ++ EA L R + K + F L+
Sbjct: 912 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971
Query: 414 DGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDME 468
CK+ + A EL + G + ++V+Y V+I GLC +G + A++L +M+
Sbjct: 972 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1026
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 158/361 (43%), Gaps = 36/361 (9%)
Query: 107 ICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRG 166
I E+++ +G PD V+ N +++ + +M + L + + P++ T L+ G
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 763
Query: 167 LCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRG 226
+ + + L+ + ++P+ + S++ G+C+ + + RG
Sbjct: 764 YSKRKDVSTSFLLYRSIIL----NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 819
Query: 227 IYPDAFVYNSLIRVYCCA---VNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYC 283
+ D + +N LI CCA +NW A +L V LG+ D
Sbjct: 820 VEVDRYTFNMLIS-KCCANGEINW---------AFDL----VKVMTSLGISLDKDTCD-- 863
Query: 284 SIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESE 343
++++ L ++ +++ + +M +GI P+ Y LI+G C +G I A + + +
Sbjct: 864 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923
Query: 344 GCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRP-------------DNSCILEA 390
P + + ++ + +K K +EA L M+ M + P N ++EA
Sbjct: 924 KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983
Query: 391 AELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICG 450
EL + N +LDL +N L+ GLC + A+EL++++ G N TY +I G
Sbjct: 984 LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Query: 451 L 451
L
Sbjct: 1044 L 1044
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 119/295 (40%), Gaps = 59/295 (20%)
Query: 233 VYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKD 292
VY+ LIRVY +G +LE+ G G +P V + +I+ S+ K
Sbjct: 125 VYDILIRVYL-------REGMIQDSLEIFRLM----GLYGF--NPSVYTCNAILGSVVKS 171
Query: 293 VLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSY 352
+M R I PDV ++ LI+ C G + + L +E G P +Y
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231
Query: 353 NTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCL 412
NT+++ Y K + + A+ L M S GV + D+ +N L
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGV----------------------DADVCTYNML 269
Query: 413 VDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM----- 467
+ LC+S R+ + L + + + PN VTY +I G EG + A LL +M
Sbjct: 270 IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329
Query: 468 ----------------EEKIRECLKAIELLHKMAKRYVKPDEITVSILEELLNKD 506
E +E LK + + M + + P E++ +L + L K+
Sbjct: 330 SPNHVTFNALIDGHISEGNFKEALK---MFYMMEAKGLTPSEVSYGVLLDGLCKN 381
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 69 NDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLNIL 128
++A +M+ M+ P + SF +L+ + + L ++ GL D VS N+L
Sbjct: 946 DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005
Query: 129 MNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGL 167
+ C ++ AF + F + T LIRGL
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 197/465 (42%), Gaps = 72/465 (15%)
Query: 53 LLKYLSENSKSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSER 112
LLK L N + G+ A+ M P + S+N+++ K + L+
Sbjct: 148 LLKGLCRNLECGK-----AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 113 LNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGK 172
+ G V+ IL++ FCK + +A L + D+V LIRG C G+
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 173 FTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAF 232
LF + + P I Y ++I G CK G + + +F M RG+ P+ +
Sbjct: 263 LDRGKALFDEVL----ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318
Query: 233 VYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKD 292
Y LI C G T AL+L + + E P+ ++Y IIN LCKD
Sbjct: 319 TYTGLIDGLC-------GVGKTKEALQLLNLMIEKDEE------PNAVTYNIIINKLCKD 365
Query: 293 VLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSI--ESEGCIPDTS 350
LV A E+ MK R PD + Y+ L+ G C G +D+A KL + +S PD
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425
Query: 351 SYNTLINSYSKIEKVEEALSLYG---EMISMGVRPDNSCIL----------EAAELFRTL 397
SYN LI+ K ++ +AL +Y E + G R + +L +A EL++ +
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 398 HNTKF---------------------------------ELDLTVF--NCLVDGLCKSWRL 422
++K EL +VF NCL+ LCK L
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 423 RSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDM 467
AW LF+++ R P+VV++ +MI G G I+ A LL M
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 201/461 (43%), Gaps = 95/461 (20%)
Query: 39 LHSNSVSTVEEKTKLLKYLSENSKSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALA 98
++S V+ E L+ L E+S +L +A+ F + + N + +
Sbjct: 28 VYSKLVNAFSETETKLRSLCEDSNP---QLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVR 84
Query: 99 GKKYYVNFICLSERLNTIGLLPDFVSLNILMNCFCKMIGVSDAFVALGRILRKVFSPDVV 158
+ + + F + L T + +FVSL+ L+ C+ +M AF L +L++ F+ +V
Sbjct: 85 SRNHELAFSFYRKMLETDTFI-NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVY 143
Query: 159 TLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVL 218
L++GL CR N+ C K L
Sbjct: 144 NHNILLKGL--------------------CR-----NLEC--------------GKAVSL 164
Query: 219 FLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPD 278
+M+ + PD F YN++IR +C E ALEL E + G+G C
Sbjct: 165 LREMRRNSLMPDVFSYNTVIRGFCEGKELE-------KALELANE-MKGSG-----CSWS 211
Query: 279 VLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFV 338
++++ +I++ CK +D+A +MK G+ D+VVY+SLI G+C G +D + LF
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 339 SIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLH 398
+ G P +YNTLI + K+ +++EA ++ MI GVRP
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP---------------- 315
Query: 399 NTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMICGLCIEGGIE 458
++ + L+DGLC + + A +L + EPN VTY ++I LC +G
Sbjct: 316 ------NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG--- 366
Query: 459 KAYDLLPDMEEKIRECLKAIELLHKMAKRYVKPDEITVSIL 499
L+ D A+E++ M KR +PD IT +IL
Sbjct: 367 ----LVAD----------AVEIVELMKKRRTRPDNITYNIL 393
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 184/413 (44%), Gaps = 60/413 (14%)
Query: 67 ELNDALCFFNYMIHMQPTPFMPSFNSLLGALAGKKYYVNFICLSERLNTIGLLPDFVSLN 126
+L +A F +MI P + ++ L+ L G + L + P+ V+ N
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 127 ILMNCFCKMIGVSDAFVALGRILRKVFSPDVVTLGCLIRGLCMQGKFTEASGLFTKFVAF 186
I++N CK V+DA + + ++ PD +T L+ GLC +G EAS L ++
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL--YLML 414
Query: 187 DCRPNVIPNVICYASIIDGLCKDGFVNK---VRVLFLDMKGRGIYPDAFVYNSLIRVYCC 243
P+VI Y ++I GLCK+ +++ + L ++ G G D N L+
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILL----- 466
Query: 244 AVNWEDAKGNTSAALELHEE---------------FVNG-------NGELGVIC------ 275
N G+ + A+EL ++ ++G N G++C
Sbjct: 467 --NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 276 -HPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDAR 334
P V Y +++SLCK+ +D+A LF +M+ PDVV ++ +IDG G I A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 335 KLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVRPDNS--------C 386
L V + G PD +Y+ LIN + K+ ++EA+S + +M+ G PD C
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 387 ILEA-----AELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPR 434
I + EL + L + LD + ++D +C S + +L K+L R
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS---SANMDLAKRLLR 694
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 161/342 (47%), Gaps = 35/342 (10%)
Query: 147 RILRKVFSPD----VVTLGCLIRGLCMQGKFTEASGLFTKFVAFDCRPNVIPNVICYASI 202
RI F+ V LI G EA +F + RPN++ Y ++
Sbjct: 254 RIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLV----TYNAV 309
Query: 203 IDGLCKDGF-VNKVRVLFLDMKGRGIYPDAFVYNSLIRVYCCAVNWEDAKGNTSAALELH 261
ID K G +V F +M+ G+ PD +NSL+ V WE AA L
Sbjct: 310 IDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE-------AARNLF 362
Query: 262 EEFVNGNGELGVICHPDVLSYCSIINSLCKDVLVDKAKELFLDMKSRGIIPDVVVYSSLI 321
+E N E DV SY ++++++CK +D A E+ M + I+P+VV YS++I
Sbjct: 363 DEMTNRRIE------QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 322 DGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMISMGVR 381
DG+ GR D+A LF + G D SYNTL++ Y+K+ + EEAL + EM S+G++
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 382 PD----NSCIL---------EAAELFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWEL 428
D N+ + E ++F + +L ++ L+DG K + A E+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 429 FKKLPRYGPEPNVVTYTVMICGLCIEGGIEKAYDLLPDMEEK 470
F++ G +VV Y+ +I LC G + A L+ +M ++
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 198/449 (44%), Gaps = 48/449 (10%)
Query: 57 LSENSKSGEVELNDALCFFNYMIHMQPTPFMPSFNSLLGALA-GKKYYVNFICLSERLNT 115
+S +SG E +A+ FN M P + ++N+++ A G + + +
Sbjct: 275 ISAYGRSGLHE--EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR 332
Query: 116 IGLLPDFVSLNILMNCFCKMIGVSDAFVAL-GRILRKVFSPDVVTLGCLIRGLCMQGKFT 174
G+ PD ++ N L+ C G+ +A L + + DV + L+ +C G+
Sbjct: 333 NGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 175 EASGLFTKFVAFDCRPNVIPNVICYASIIDGLCKDGFVNKVRVLFLDMKGRGIYPDAFVY 234
A + + ++PNV+ Y+++IDG K G ++ LF +M+ GI D Y
Sbjct: 392 LAFEILAQMPV----KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 235 NSLIRVYCCAVNWEDAKGNTSAALELHEEFVNGNGELGVICHPDVLSYCSIINSLCKDVL 294
N+L+ +Y G + AL++ E + V DV++Y +++ K
Sbjct: 448 NTLLSIYTKV-------GRSEEALDILREMAS------VGIKKDVVTYNALLGGYGKQGK 494
Query: 295 VDKAKELFLDMKSRGIIPDVVVYSSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNT 354
D+ K++F +MK ++P+++ YS+LIDGY G +A ++F +S G D Y+
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 355 LINSYSKIEKVEEALSLYGEMISMGVRPDNSCILEAAELFRTLHNTKFELDLTVFNCLVD 414
LI++ K V A+SL EM G+ P ++ +N ++D
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISP----------------------NVVTYNSIID 592
Query: 415 GLCKSWRL-RSA-WELFKKLPRYGPEPNVVTYTV--MICGLCIEGGIEKAYDLLPDMEEK 470
+S + RSA + LP + +T T + L + E D EE
Sbjct: 593 AFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEG 652
Query: 471 IRECLKAIELLHKMAKRYVKPDEITVSIL 499
++E +E+ KM + +KP+ +T S +
Sbjct: 653 MQELSCILEVFRKMHQLEIKPNVVTFSAI 681
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 67/249 (26%)
Query: 318 SSLIDGYCLMGRIDDARKLFVSIESEGCIPDTSSYNTLINSYSKIEKVEEALSLYGEMIS 377
S++I G++ A+++F + + G +++ LI++Y + EEA+S++ M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 378 MGVRPD--------NSC----------------------------------------ILE 389
G+RP+ ++C + E
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 390 AAE-LFRTLHNTKFELDLTVFNCLVDGLCKSWRLRSAWELFKKLPRYGPEPNVVTYTVMI 448
AA LF + N + E D+ +N L+D +CK ++ A+E+ ++P PNVV+Y+ +I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 449 CGLCIEGGIEKAYDLLPDME------------------EKIRECLKAIELLHKMAKRYVK 490
G G ++A +L +M K+ +A+++L +MA +K
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 491 PDEITVSIL 499
D +T + L
Sbjct: 477 KDVVTYNAL 485
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,786,477
Number of Sequences: 539616
Number of extensions: 8435726
Number of successful extensions: 34008
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 22969
Number of HSP's gapped (non-prelim): 2793
length of query: 531
length of database: 191,569,459
effective HSP length: 122
effective length of query: 409
effective length of database: 125,736,307
effective search space: 51426149563
effective search space used: 51426149563
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)