Your job contains 1 sequence.
>038192
MTGNLPSSLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETG
CGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQ
VRHDKKIGDSCSIKFMTDGILLRELKALYEKQQQLLRSGQCIEPKDRVFPLKLILMSATL
RVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGI
LVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEI
QGYSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEILGEDEKLVEQKCPMDGDDP
VDVLKENWSLGSLKLAFEVLSGKNASGPSSQMKLSTPAIPEQCTELPPTPTPEQCPELSS
PDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPG
IKYVVDTGREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNN
ILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSN
GRLTALGKAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVL
QLEGTQTNSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVA
YALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038192
(764 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2007003 - symbol:FAS4 "FASCIATED STEM 4" speci... 919 7.8e-206 3
DICTYBASE|DDB_G0287351 - symbol:dhx37 "DEAD/DEAH box heli... 943 1.4e-131 2
SGD|S000004735 - symbol:ECM16 "Essential DEAH-box ATP-dep... 546 3.1e-112 3
CGD|CAL0004556 - symbol:orf19.2090 species:5476 "Candida ... 535 2.6e-109 4
POMBASE|SPAPB1A10.06c - symbol:SPAPB1A10.06c "ATP-depende... 508 1.7e-100 3
RGD|1306837 - symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box po... 572 2.5e-96 2
WB|WBGene00015525 - symbol:rha-2 species:6239 "Caenorhabd... 515 5.0e-85 3
UNIPROTKB|E1C9C2 - symbol:DHX37 "Uncharacterized protein"... 477 2.1e-83 2
UNIPROTKB|E1BNQ2 - symbol:DHX37 "Uncharacterized protein"... 478 3.0e-82 2
UNIPROTKB|F5H3Y4 - symbol:DHX37 "Probable ATP-dependent R... 470 5.3e-82 2
UNIPROTKB|Q8IY37 - symbol:DHX37 "Probable ATP-dependent R... 470 1.3e-81 2
UNIPROTKB|E2RHZ3 - symbol:DHX37 "Uncharacterized protein"... 463 2.7e-81 2
ZFIN|ZDB-GENE-030131-4505 - symbol:dhx37 "DEAH (Asp-Glu-A... 456 2.3e-80 2
UNIPROTKB|G4NGS5 - symbol:MGG_04040 "DEAH box polypeptide... 520 1.5e-79 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 422 5.3e-71 3
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 405 9.5e-70 3
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 398 2.4e-69 3
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 394 8.2e-68 3
UNIPROTKB|F1RFN6 - symbol:DHX37 "Uncharacterized protein"... 313 3.0e-67 3
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 394 1.6e-66 3
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 402 3.2e-66 3
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 388 2.2e-65 3
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 389 3.0e-65 3
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 404 3.3e-65 3
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 384 7.0e-65 3
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 399 9.2e-65 3
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 399 9.2e-65 3
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 398 1.1e-64 3
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 382 2.6e-64 3
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 387 4.6e-64 3
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 396 5.9e-64 3
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 374 9.4e-64 3
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 391 1.0e-63 3
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 389 1.9e-63 3
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 417 2.5e-63 2
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 372 3.3e-63 3
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 393 3.5e-63 3
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 383 3.5e-63 3
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 383 3.6e-63 3
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 392 3.6e-63 3
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 403 3.6e-63 3
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 403 3.6e-63 3
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 393 3.7e-63 3
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 393 4.2e-63 3
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 393 4.2e-63 3
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 393 4.3e-63 3
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 393 4.4e-63 3
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 393 4.6e-63 3
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 393 4.8e-63 3
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 393 4.9e-63 3
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 384 6.0e-63 2
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 366 1.1e-62 3
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 397 1.4e-62 3
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 397 1.4e-62 3
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 397 1.4e-62 3
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 384 1.5e-62 3
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 377 1.8e-62 3
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 379 2.2e-62 3
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 379 2.2e-62 3
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 385 2.2e-62 3
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 395 2.4e-62 3
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 390 3.5e-62 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 380 7.3e-62 3
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 380 7.3e-62 3
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 389 1.1e-61 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 389 1.2e-61 3
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 384 1.5e-61 3
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 388 1.6e-61 3
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 359 3.9e-61 3
DICTYBASE|DDB_G0269306 - symbol:dhx35 "DEAD/DEAH box heli... 336 4.9e-61 4
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 386 6.9e-61 3
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 384 1.5e-60 3
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 336 1.8e-60 4
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 391 2.2e-60 2
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 389 3.3e-60 3
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 355 1.2e-59 3
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 383 3.0e-59 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 362 5.5e-59 3
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 330 1.1e-58 4
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 330 1.6e-58 4
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 340 2.1e-58 3
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 318 7.7e-58 4
GENEDB_PFALCIPARUM|MAL13P1.14 - symbol:MAL13P1.14 "ATP-de... 421 1.3e-57 4
UNIPROTKB|Q8IET8 - symbol:MAL13P1.14 "ATP dependent DEAD-... 421 1.3e-57 4
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 354 1.5e-57 3
UNIPROTKB|F1NWM3 - symbol:DHX40 "Uncharacterized protein"... 282 6.5e-57 4
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 362 1.3e-56 3
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 328 1.8e-56 3
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 328 1.8e-56 3
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 322 2.4e-56 3
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 343 2.5e-56 3
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 339 6.3e-56 3
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 334 6.5e-56 3
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 334 6.7e-56 3
FB|FBgn0001330 - symbol:kz "kurz" species:7227 "Drosophil... 557 2.1e-55 2
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 301 2.5e-55 3
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 379 3.6e-54 3
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 349 2.2e-53 2
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 308 1.1e-52 3
ZFIN|ZDB-GENE-080507-1 - symbol:dhx40 "DEAH (Asp-Glu-Ala-... 308 1.7e-52 3
WARNING: Descriptions of 208 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 919 (328.6 bits), Expect = 7.8e-206, Sum P(3) = 7.8e-206
Identities = 192/329 (58%), Positives = 229/329 (69%)
Query: 435 GALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKK 494
G L VLPLYAML AAQLRVFE+V++ ERLVVV+TNVAETSLTIPGIKYVVDTGR KVK
Sbjct: 645 GKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKN 704
Query: 495 YNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVP 554
Y+S G+ESYE+ WIS+ HCYRLYSSAVF+NI + S EI KVP
Sbjct: 705 YDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVP 764
Query: 555 VDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYP 614
VDGV+LLMKSMNI KV NFPFPTPPE +A+ EAERCLKALEALDSNG LT LGKAM+HYP
Sbjct: 765 VDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYP 824
Query: 615 MSPRHSRMLLTLIQTMK-VKSYARXXXXXXXXXXXXXXXXXXXPFVLQLEGTQTNSNDSE 673
MSPRHSRMLLT+IQ +K ++Y+R P +++ EG + N E
Sbjct: 825 MSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKN----E 880
Query: 674 LEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPV 733
++ D + ED K K+ KE K + +FSNP+SD LTVAYAL FE+S++ +
Sbjct: 881 SKDADKTVKQED------KQRKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGM 934
Query: 734 EFCNEYALHLKTMEEMSKLRKQLLHLLFN 762
FC LHLKTM+EMSKL+ QLL L+FN
Sbjct: 935 GFCEANGLHLKTMDEMSKLKDQLLRLVFN 963
Score = 567 (204.7 bits), Expect = 7.8e-206, Sum P(3) = 7.8e-206
Identities = 131/265 (49%), Positives = 170/265 (64%)
Query: 123 HDKKIGDSCSIKFMTDGILLRELKALYEKQQQLLRSGQCIEPKDRVFPLKLILMSATLRV 182
H++ + I +T I +R+ YE+QQ+ L+SG + + ++ PLKLILMSATLRV
Sbjct: 370 HERSLNTDILIGMLTRVIKIRQ--EYYEEQQKSLQSGGTVTSECQITPLKLILMSATLRV 427
Query: 183 EDFISGGRLFRN-PPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGIL 241
EDF+SG RLF N PP+IEVPTRQ+PVT+HFSK+TEIVDYIG+AYKKVMSIHK+LPQGGIL
Sbjct: 428 EDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIHKKLPQGGIL 487
Query: 242 VFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQ 301
VFVTGQREV+YLC KLRK+SK+L+V ++K + V + + ++MKEI EAF+
Sbjct: 488 VFVTGQREVDYLCEKLRKSSKELVVQAAKRDA--YVKKKCDDGSFGGVDMKEIAEAFDDD 545
Query: 302 GYSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEILGEDEKLVEQKCPMDGDDPV 361
+ Q RFSS+ ED DI D D D E E E DE ++ D
Sbjct: 546 ---SNNQNSRFSSHGEDPSDIGDGNYD--DDFEEEDMYE---SDE---DRDWETVDDGFA 594
Query: 362 DVLKENWSLGSLKLAFEVLSGKNAS 386
E L +L+ AF L+ KN S
Sbjct: 595 SSFVEEGKLDALRAAFNALADKNGS 619
Score = 544 (196.6 bits), Expect = 7.8e-206, Sum P(3) = 7.8e-206
Identities = 108/139 (77%), Positives = 122/139 (87%)
Query: 8 SLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQV 67
++Q P VVHVSRP EVE RKDLPIVMMEQEIMEA+N + AVII G+TGCGKTTQV
Sbjct: 215 TVQGPRVPAFVVHVSRPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQV 274
Query: 68 PQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI 127
PQFL+EAGFGS + SSRSG IG+TQPRRVAVLATAKRVAFELG+ LGKEVGFQVR+DKKI
Sbjct: 275 PQFLYEAGFGSKQFSSRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKI 334
Query: 128 GDSCSIKFMTDGILLRELK 146
G++ SIKFMTDGILLRE++
Sbjct: 335 GENSSIKFMTDGILLREIQ 353
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 943 (337.0 bits), Expect = 1.4e-131, Sum P(2) = 1.4e-131
Identities = 238/658 (36%), Positives = 360/658 (54%)
Query: 123 HDKKIGDSCSIKFMTDGILLRELKALYEKQQQLLRSGQCIEPKDRVFPLKLILMSATLRV 182
H++ + I ++ + LR K LY K ++ I D ++PLKL++MSATLRV
Sbjct: 535 HERNLNTDILIGLLSRIVPLR--KKLYLKSLATNKANGTIGV-DMIYPLKLVVMSATLRV 591
Query: 183 EDFISGGRLF-RNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGIL 241
EDF LF R PP+I +PTRQFPVT+HF+K+TE+V+YI + YKKV+ IHK LP GGIL
Sbjct: 592 EDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVVKIHKNLPSGGIL 651
Query: 242 VFVTGQREVEYLCSKLRKASKQLLVNSSKE---NKGNQVVADSEPNATKDINMKEI--NE 296
VFVTG++E+EYLCSKLR+A +N S + +K NQ + +I + +
Sbjct: 652 VFVTGKQEIEYLCSKLRRAFPIKAINKSFKVEIDKINQQFKSDDQENQNNIKSSNLVYGD 711
Query: 297 AFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEILGEDEKLVEQKCPMD 356
A + +T T ++D+D + +D++ D + + + ++ + + DE+ VE++ ++
Sbjct: 712 AEDFDFDNTVDDTFNIDNHDDDDDNDNDDDNDDIENLDVLNDDQFIVNDEEEVEEE-EVE 770
Query: 357 GDDPVDVLKENWSLGSLKLAFEVLSGKNASGPSSQMKLSTPAIPEQCTELPPTPTPEQCP 416
++ + E + ++ E + + + + + E E
Sbjct: 771 EEEVEEEEVEEEEVEEEEVEEEEVEEEEVEEEEVEEE---EEVDENENNNNNNNEDEDEF 827
Query: 417 ELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSL 476
E+ D+ D K AG L VLPLY+ LP + Q+RVF+ G RLVVV+TN+AETSL
Sbjct: 828 EIGKEDIITEDDEKPAG--PLFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSL 885
Query: 477 TIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSA 536
TIP IKYVVDTGR K + YN NGI S+E+ W SK HCYR+YSSA
Sbjct: 886 TIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSA 945
Query: 537 VFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEA 596
VFN+ FS EI +P+DG++L MKSM I K++ FPFPTPP+ ++L A R L L A
Sbjct: 946 VFNDHFQQFSKPEILMIPIDGMILQMKSMGIQKITGFPFPTPPDESSLKLALRTLINLGA 1005
Query: 597 LD-SNGRLTALGKAMAHYPMSPRHSRMLLTLIQTMKVKSYARXXXXXXXXXXXXXXXXXX 655
L+ +T LG M+ +P+SPRHS+MLL L Q Y
Sbjct: 1006 LEVKTFSITELGMKMSQFPVSPRHSKMLL-LGQEHNCLPYI---------IAIVSILTVK 1055
Query: 656 XPFVLQL-EGTQTNS-ND--SELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSN 711
PF+ + E Q N ND +E ++ D++ SE +EK ++K + + S K+ +
Sbjct: 1056 DPFLKEAYEANQNNDENDDNNEKQQIDSSSQSEKEFIEKEKEERQKHLQRLRNSMRKWLH 1115
Query: 712 PTSDVLTVAYALQCFE--LSKSPVE---FCNEYALHLKTMEEMSKLRKQLLHLLFNQN 764
SD+L++ + ++ + KSP + FC++ L+ K+M E+ KLR QL ++ + N
Sbjct: 1116 KESDLLSILKVVGAYDYQIRKSPKDIDHFCSQNFLNTKSMSEIHKLRHQLTEIVNSIN 1173
Score = 382 (139.5 bits), Expect = 1.4e-131, Sum P(2) = 1.4e-131
Identities = 76/129 (58%), Positives = 96/129 (74%)
Query: 19 VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGS 78
V V R E++ R +LPI++ E I+E + DN VIICGETG GKTTQVPQFL+E+GFG
Sbjct: 390 VKVERKPEIDAVRDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGH 449
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS-IKFMT 137
G IGVTQPRRVA ++TAKRVA EL + GKEVG+Q+R+DKK+ S + IKFMT
Sbjct: 450 RESGDFPGIIGVTQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMT 509
Query: 138 DGILLRELK 146
DGIL+RE++
Sbjct: 510 DGILMREVQ 518
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 546 (197.3 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 125/326 (38%), Positives = 183/326 (56%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLPLY++LP Q+RVF+ +G RL +V+TNVAETSLTIPG++YVVD+GR K +KYN
Sbjct: 729 LYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYN 788
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+NG++S+E+ W+SK HCYRLYSSAVF + FS EI ++PV+
Sbjct: 789 ESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVE 848
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
+VL MKSM I + NFPFPTPP+ AL +A + L+ L ALD+ +T GK M+ +P+S
Sbjct: 849 SIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPLS 908
Query: 617 PRHSRMLLTLIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQLEGTQTNSNDSELEE 676
PR S+MLL + + + + N +D ++ E
Sbjct: 909 PRFSKMLLVSDEKACLPYIVAIVSALSVGDPFINEFELGINEISRKPNPDENLDD-KIRE 967
Query: 677 RDNALDSEDPMCRQEKLGK--RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVE 734
D + DP ++E K + + +KL KFS+ +L+V A+ + +
Sbjct: 968 HDESTPGMDPELKKELRSKFYKSRSQFSKLD--KFSD-VFRLLSVVSAMDYVPKEQKEI- 1023
Query: 735 FCNEYALHLKTMEEMSKLRKQLLHLL 760
F + L K MEE+ KLRKQL++++
Sbjct: 1024 FMKKNFLRGKLMEEIVKLRKQLMYII 1049
Score = 357 (130.7 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 70/127 (55%), Positives = 91/127 (71%)
Query: 19 VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGS 78
V VSR +E++ R LP+ E +IMEA++ N VIICGETG GKTTQVPQFL+EAGFG+
Sbjct: 376 VEVSRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGA 435
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTD 138
G +G+TQPRRVA ++ A+RVA ELG H G +VG+Q+R D + +KFMTD
Sbjct: 436 EDSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTD 494
Query: 139 GILLREL 145
G+LLRE+
Sbjct: 495 GVLLREM 501
Score = 273 (101.2 bits), Expect = 3.1e-112, Sum P(3) = 3.1e-112
Identities = 71/182 (39%), Positives = 109/182 (59%)
Query: 171 LKLILMSATLRVEDFISGGRLFR-NPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVM 229
LKLI+MSATLRV DF LF PP+++V RQFPV++HF++RT +Y +A++K
Sbjct: 553 LKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAF-NYTDEAFRKTC 611
Query: 230 SIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQV-VADSEPNA-TK 287
IH++LP G ILVF+TGQ+E+ ++ +LRK +SK NK + V+ N+ T
Sbjct: 612 KIHQKLPPGAILVFLTGQQEITHMVKRLRKEFP--FKKNSKYNKDLETPVSKMGINSKTT 669
Query: 288 DINMKEINEAFEIQGYSTEQQTDRFSS---YDEDQFDIDDNELDALSDSETESETEILGE 344
D+ ++I+ F +Q +Q D+F S Y+ED+ + + E + D E E E+L E
Sbjct: 670 DLEAEDID--FSVQ--VIDQ--DKFKSAIRYEEDEGNSGNGEDE--EDEEEEGFEEVLTE 721
Query: 345 DE 346
+
Sbjct: 722 GQ 723
Score = 66 (28.3 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 276 QVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSDSET 335
+V+ K N ++ E E++ + E + D ++ ++D + D E D + SE
Sbjct: 233 KVINKESKTPKKKYNWRQRVEMEELKKHGKEDEMDFDTTSEDDDEEEDQEEEDKMHPSEN 292
Query: 336 ESETEILGEDEKLVEQKCPMDGDDPVDVLKENWSLGSLK 374
E E+ D + +K D +D + K+ W+ +K
Sbjct: 293 PLE-EVESADSETGSEK--FDQNDVANEFKD-WANQEIK 327
Score = 40 (19.1 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 197 IIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVM 229
II P P V SK +++ Y+G K M
Sbjct: 862 IINFPFPTPPDRVALSKAIQLLQYLGALDNKEM 894
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 535 (193.4 bits), Expect = 2.6e-109, Sum P(4) = 2.6e-109
Identities = 102/202 (50%), Positives = 139/202 (68%)
Query: 424 EKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKY 483
E+ D+K + VG L VLPLY++LP Q++VFED G R+ +V+TNVAETSLTIPGI+Y
Sbjct: 758 EESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRY 817
Query: 484 VVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILP 543
VVD GR K +KYN NG++S+E+ W+SK HCYRLYSSAVF + P
Sbjct: 818 VVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFEDFFP 877
Query: 544 DFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGR- 602
FS EI ++P + +VL MKSM ID+++NFPFPTPP+ +L +AE L L ALD +
Sbjct: 878 QFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVILGALDKEQKQ 937
Query: 603 LTALGKAMAHYPMSPRHSRMLL 624
+T LGK M+ +P+SPR +++L+
Sbjct: 938 ITDLGKKMSLFPLSPRFAKILI 959
Score = 325 (119.5 bits), Expect = 2.6e-109, Sum P(4) = 2.6e-109
Identities = 73/148 (49%), Positives = 96/148 (64%)
Query: 3 GNLPSSLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCG 62
G +P + + A VV V+R + ++ R LP+ E IMEAV + +I+CGETG G
Sbjct: 413 GYIPINKEMQRRA-FVVEVNRTDSIQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSG 471
Query: 63 KTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVR 122
KTTQVPQFL+EAGFG+ G IGVTQPRRVA ++ A+RV ELG H G VG+Q+R
Sbjct: 472 KTTQVPQFLYEAGFGNLLHDLYPGMIGVTQPRRVAAVSMAERVGSELGDH-GHRVGYQIR 530
Query: 123 HDKKI---G--DSCSIKFMTDGILLREL 145
D I G + ++KFMTDG+LLRE+
Sbjct: 531 FDTTIKNEGKENGTALKFMTDGVLLREM 558
Score = 272 (100.8 bits), Expect = 2.6e-109, Sum P(4) = 2.6e-109
Identities = 59/164 (35%), Positives = 98/164 (59%)
Query: 170 PLKLILMSATLRVEDFISGGRLFRNPP-IIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKV 228
PLKLI+MSATLRV DF LF+ PP II V RQ+PV++HF+K+T DY+ +A+KK
Sbjct: 609 PLKLIIMSATLRVSDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNY-DYLEEAFKKT 667
Query: 229 MSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQV-VADSEPNATK 287
IH++LP+GGIL+F+TGQ E+ L KLR+ ++ + ++ V ++++ +
Sbjct: 668 CKIHRKLPEGGILIFLTGQNEITTLVKKLRQEFPFKKKSTIQYDENIDVKLSENVQQEVE 727
Query: 288 DINMK-EINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDAL 330
D++ + +A + Y ++ + E+ D ++E+ L
Sbjct: 728 DVDFSVQSGDAGILDDYEEGEENEEEEEGFEESIDSKESEVGPL 771
Score = 69 (29.3 bits), Expect = 1.2e-56, Sum P(3) = 1.2e-56
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 266 VNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQ-GYSTEQQTDRFSSYDEDQFDIDD 324
+N+S+E + DS+ D N +E + G S E + D S +E++ D DD
Sbjct: 278 MNTSEETVEADELRDSDVAEDSDSNEEESEHEINPEAGESAESEGDSSSEVEEEEDDDDD 337
Query: 325 NELDALSDSETESETEIL 342
++ + E E E++++
Sbjct: 338 DD----DEEEEEEESKLM 351
Score = 61 (26.5 bits), Expect = 8.4e-56, Sum P(3) = 8.4e-56
Identities = 23/92 (25%), Positives = 40/92 (43%)
Query: 271 ENKGNQVVADSEPNATK---DINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNEL 327
E + + V DS+ N + +IN E E+ E +G S+ + + D+D + ++ E
Sbjct: 289 ELRDSDVAEDSDSNEEESEHEIN-PEAGESAESEGDSSSEVEEEEDDDDDDDDEEEEEEE 347
Query: 328 DALSDSETESETEILGEDEKLVEQKCPMDGDD 359
L S+ T E +Q M+G D
Sbjct: 348 SKLMKSKPRHSTTAASFKEWAEQQVRIMEGRD 379
Score = 56 (24.8 bits), Expect = 2.6e-109, Sum P(4) = 2.6e-109
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 679 NALDSEDPMCRQEKL-------GKRKLKEVAKLSHAKFS--NPTSDVLTVAYALQCFE-L 728
+AL DP + +L +R+ + S A FS + +S+ + + A+ ++ +
Sbjct: 975 SALSVGDPFIGENELVGNMNDEARREFRTKFYHSRALFSKLDASSNCMMLLSAVCAYDHV 1034
Query: 729 SKSPVE-FCNEYALHLKTMEEMSKLRKQLLHLLFN 762
K F ++ L K MEE+ KLRKQ+ +++ N
Sbjct: 1035 PKEEQNGFLQKHYLRHKMMEEIQKLRKQVGNIVEN 1069
Score = 53 (23.7 bits), Expect = 5.7e-55, Sum P(3) = 5.7e-55
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 306 EQQTDRFSSYDEDQFDIDDNELDALSDSETESETEILGEDE 346
++ D F+S ED+ + D++ D ++ SE E + L + +
Sbjct: 254 KEDDDDFASSSEDEEESDNSNADDMNTSEETVEADELRDSD 294
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 508 (183.9 bits), Expect = 1.7e-100, Sum P(3) = 1.7e-100
Identities = 117/322 (36%), Positives = 176/322 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPLY++L Q++VF+ EG R+ +V+TNVAETS+TIP I+YVVD G+ K + YN
Sbjct: 704 VLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEK 763
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ +E++WISK HCYRLYSSAVF++ P S EI + PV+ +
Sbjct: 764 TSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESI 823
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
VL MK+MNID ++NFPFPT P + L ++ + L L A+DS G LT LG+ M+ +P+SPR
Sbjct: 824 VLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPR 883
Query: 619 HSRMLLTLIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQLEGTQTNSNDSELEERD 678
S+ML+ + Q Y L + NS EE D
Sbjct: 884 FSKMLI-IGQQHGCLPYVIALVSALSINQLFVSKQS-----LLYDAHDKNSRS---EETD 934
Query: 679 NALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNE 738
L +D + ++E+ R +S + +P + L++ A+ ++ + +FC E
Sbjct: 935 --LIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYDYASDKRKFCKE 992
Query: 739 YALHLKTMEEMSKLRKQLLHLL 760
L K +EE++ LRKQ++ LL
Sbjct: 993 NYLREKALEEVTNLRKQIIGLL 1014
Score = 330 (121.2 bits), Expect = 1.7e-100, Sum P(3) = 1.7e-100
Identities = 70/127 (55%), Positives = 86/127 (67%)
Query: 21 VSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNR 80
++RP E++ +R LPIV EQ IME + N VIICG TG GKTTQ+PQFLFEAGF S
Sbjct: 385 INRPPEIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPE 444
Query: 81 CSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGI 140
S G I +TQPRRVA ++ AKRV+ EL +V +Q+R D I +IKFMTDGI
Sbjct: 445 -SENPGMIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGI 502
Query: 141 LLRELKA 147
LLREL +
Sbjct: 503 LLRELSS 509
Score = 271 (100.5 bits), Expect = 1.7e-100, Sum P(3) = 1.7e-100
Identities = 63/124 (50%), Positives = 83/124 (66%)
Query: 137 TDGILLRELKALYEKQQQLLRSGQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFR-NP 195
TD ILL L + ++++ +S Q +V PLKLI+MSATLRV DF LF P
Sbjct: 531 TD-ILLGLLSRIVRLRREMSKSDQ------KVKPLKLIIMSATLRVTDFSENKLLFSVPP 583
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PII++ RQ+PV++HF++ T+ DY+ A+ KV IHKRLP G ILVF+TGQ+EVE LC
Sbjct: 584 PIIKIDARQYPVSIHFNRTTK-PDYLQDAFDKVCLIHKRLPAGSILVFLTGQQEVEQLCQ 642
Query: 256 KLRK 259
LRK
Sbjct: 643 MLRK 646
Score = 67 (28.6 bits), Expect = 1.9e-48, Sum P(2) = 1.9e-48
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 249 EVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQ 308
E +YL + + S+ NSS+ENK +EP+ TKD K + E ++ +EQ+
Sbjct: 232 EEDYLSTDSEEFSEDS-DNSSEENKDT-----NEPS-TKDAE-KTVPE--DVVNLRSEQK 281
Query: 309 TDRFSSYDEDQFDIDDNELDALSDSETESETE 340
S+ +F+ +D +L+ D ++ TE
Sbjct: 282 LQ--PSFGHPEFENEDFDLETSEDDSSDDATE 311
Score = 48 (22.0 bits), Expect = 1.2e-46, Sum P(3) = 1.2e-46
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 312 FSSYDEDQFDIDDNELDALSDSETESETEILGEDEKLVEQKCPMD 356
+ S +ED D E SD+ +E + K E+ P D
Sbjct: 228 YDSAEEDYLSTDSEEFSEDSDNSSEENKDTNEPSTKDAEKTVPED 272
Score = 45 (20.9 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 11/59 (18%), Positives = 30/59 (50%)
Query: 220 YIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSS-KENKGNQV 277
+I AY ++++ + +G + +F +G V+++ + + +V S E++ +V
Sbjct: 1044 FIASAYIDQVALYDKEKRGYVTLFPSGSEVVQFVPDRTYNIDSEYVVYLSLHESRSGRV 1102
Score = 39 (18.8 bits), Expect = 1.2e-46, Sum P(3) = 1.2e-46
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 251 EYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKE 293
+Y+ +KL+K L+ E + + + S N K KE
Sbjct: 94 KYIENKLKKEEVASLIAKLAEERIDTSLLSSSKNLGKQATAKE 136
Score = 38 (18.4 bits), Expect = 1.6e-46, Sum P(3) = 1.6e-46
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 247 QREVEYLCSKLRKASKQLLVNSSKENKGNQVVA 279
+ EV L +KL + + SS +N G Q A
Sbjct: 102 KEEVASLIAKLAEERIDTSLLSSSKNLGKQATA 134
Score = 37 (18.1 bits), Expect = 4.1e-48, Sum P(3) = 4.1e-48
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 328 DALSDSETESETEILGEDEKLVEQK 352
DA + ET+++ +DE ++QK
Sbjct: 922 DAHDKNSRSEETDLIDDDE--IKQK 944
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 572 (206.4 bits), Expect = 2.5e-96, Sum P(2) = 2.5e-96
Identities = 153/364 (42%), Positives = 209/364 (57%)
Query: 6 PSSLQRP-LAAPIV-VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGK 63
P+S P LA P V + V+R E++ R LPI+ EQ IMEAV ++ VI+CGETG GK
Sbjct: 218 PASAPPPALAKPAVFIPVNRTPEMQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGK 277
Query: 64 TTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRH 123
TTQVPQFL+EAG+ SS IGVT+PRRVA +A ++RVA E+ L + V +Q+R+
Sbjct: 278 TTQVPQFLYEAGY-----SSEDSIIGVTEPRRVAAVAMSQRVAKEMNLS-HRVVSYQIRY 331
Query: 124 DKKIGDSCSIKFMTDGILLRELKALY-----------EKQQQ---------LLRSGQCIE 163
+ + + IKFMTDG+LL+E++ + E ++ LL +
Sbjct: 332 EGNVTEETRIKFMTDGVLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALR 391
Query: 164 PKDRVFPLKLILMSATLRVEDFISGGRLFRNPP-IIEVPTRQFPVTVHFSKRTEIVDYIG 222
K R PLKL++MSATLRVEDF RLF PP +I+V +RQFPVTVHF+KRT + DY G
Sbjct: 392 AK-RHLPLKLLIMSATLRVEDFTQNQRLFTTPPPVIKVESRQFPVTVHFNKRTPLDDYSG 450
Query: 223 QAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSE 282
+ ++KV IH+ LP GGILVF+TGQ EV LC +LRKA + S+ + + DS
Sbjct: 451 ECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRKAFP---IRCSQPQEMEE---DSA 504
Query: 283 PNATKDINMKEINEAFEIQGYSTEQ-QTDRFSSYDEDQFDIDDNELDALSDSETESETEI 341
+ K A + Q + Q D +S + D +D E +E + E E
Sbjct: 505 EGMRRF--KKSRTRARKAQAMALPQINLDNYSVLPAGEGD-EDRE------AEMDDEEEA 555
Query: 342 LGED 345
LG D
Sbjct: 556 LGSD 559
Score = 425 (154.7 bits), Expect = 2.5e-96, Sum P(2) = 2.5e-96
Identities = 91/202 (45%), Positives = 126/202 (62%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLPLY++L Q +VF+ EG RL V++TNVAETSLTIPGIKYVVD G+ K + Y+
Sbjct: 581 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYD 640
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ S+ + W+S+ HCYRLYSSAVF + F EI++ PV+
Sbjct: 641 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDF-EQFPPPEITRRPVE 699
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGR-------------- 602
++L MK++NI+KV NFPFPTPP V AL+ AE L AL AL + +
Sbjct: 700 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLSC 759
Query: 603 -LTALGKAMAHYPMSPRHSRML 623
+TALG+ M+ +P++PR+++ML
Sbjct: 760 PITALGRTMSTFPVAPRYAKML 781
Score = 41 (19.5 bits), Expect = 7.4e-56, Sum P(2) = 7.4e-56
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 490 EKVKKYNSANGIESYEIQWI 509
E K Y G+ + EIQWI
Sbjct: 980 ETTKMY--MKGVSTVEIQWI 997
Score = 39 (18.8 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 18/109 (16%), Positives = 49/109 (44%)
Query: 256 KLRKASKQLLVNSSKENKGNQV--VADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFS 313
++ +A L ++K G+++ + + +P+ ++++ + G ++ R S
Sbjct: 103 QVSEAEMSLFYTTAKLGTGDRMYHIKERKPDQPAAQGQEKVSS---LSG--AHRKRHRSS 157
Query: 314 SYDEDQFDIDDNELDALSDSETESET--EILGEDEKLVEQKCPMDGDDP 360
S +ED +D+E + ++ + + T +++ E K P+ P
Sbjct: 158 STEEDSEASEDSEPEEVTADQPRTSTGADLVHPPPATSEIKSPVPTPQP 206
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 515 (186.3 bits), Expect = 5.0e-85, Sum P(3) = 5.0e-85
Identities = 131/345 (37%), Positives = 199/345 (57%)
Query: 19 VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGS 78
V V R E++ +R +LPI E I+EA+N+N ++CGETG GKTTQ+PQFL+EAG+
Sbjct: 221 VIVERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGY-- 278
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTD 138
+S IG+T+PRRVA +A A+RV EL EV +Q+R++ ++ +I FMTD
Sbjct: 279 ---ASEGELIGITEPRRVAAIAMAQRVGVELAKP--DEVSYQIRYEGTRSETTNILFMTD 333
Query: 139 GILLRELKA-----------LYEKQQQLLRSGQCIEPKDRVFPLK--------LILMSAT 179
G+L++E++ + E ++ + S I R+ PL+ L++MSAT
Sbjct: 334 GVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSAT 393
Query: 180 LRVEDFISGGRLFR--NPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQ 237
LR++DF + +LF P +I+V RQFPV+VHF KRT DYI A++K IH+ LP
Sbjct: 394 LRLDDF-THKKLFPLLTPKVIKVDARQFPVSVHFEKRTPD-DYIASAFRKTCRIHETLPP 451
Query: 238 GGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEA 297
G ILVFVTGQ EV+ L +KL+K + +V + +N G +V ++ K + E ++
Sbjct: 452 GAILVFVTGQHEVKQLITKLKK--RYPVVYETDKN-GEVLVKGTKEWKEKKV---EAAKS 505
Query: 298 FEIQGYSTEQ-QTDRFSSYDEDQFDIDD-NELDALSDSETESETE 340
+++ + E +T+ F D+ D DD NE A + E E
Sbjct: 506 IKLEDFKEETPETEDFEDVDDGLMDGDDMNERGAAEAFDDYEEFE 550
Score = 380 (138.8 bits), Expect = 5.0e-85, Sum P(3) = 5.0e-85
Identities = 90/214 (42%), Positives = 122/214 (57%)
Query: 417 ELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSL 476
+LS VE A L LPLY++L Q RVF++ G RL V+STNVAETSL
Sbjct: 555 DLSDGKVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSL 614
Query: 477 TIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSA 536
TIPG+KYV+D G EK + Y+S G+ + + IS+ H YRLYSSA
Sbjct: 615 TIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSA 674
Query: 537 VFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAER--C-LKA 593
V+ + + F+ EI P D +VL +KSMNI KV NFPFP+ P+ L AE+ C L A
Sbjct: 675 VYQDFVK-FADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGA 733
Query: 594 LEALDSNG----RLTALGKAMAHYPMSPRHSRML 623
L NG R+T LGK +A +P++P +++ +
Sbjct: 734 LSESTKNGKTEARITKLGKTLAVFPLAPSYAKFI 767
Score = 66 (28.3 bits), Expect = 4.0e-35, Sum P(3) = 4.0e-35
Identities = 43/163 (26%), Positives = 73/163 (44%)
Query: 210 HFSKRTEIVDYIGQAYKKVMSIHKR--LPQGGILVFVTGQREVEYLCSKLRKASKQLLVN 267
+F+K E+ QA +K+ ++ R L Q +F G E + SKL + S +
Sbjct: 47 NFAKEKEVAKLTKQAKRKLAAVQSRKALKQTQEELFA-GLAEFQLDPSKLCQLSSSTKL- 104
Query: 268 SSKENKGNQVVADSEPNATKDINMKEINEAFEIQG--YSTEQQTDRFSSYDEDQFDIDDN 325
SKE + V P K + K EA Q Y T+ D SS +E++ + DN
Sbjct: 105 -SKEPEKAPVF----PEKLKVFSGKTKTEAKRTQQDYYPTD---DESSSEEEEEEEEGDN 156
Query: 326 EL-DALSDSETESETEILGEDEKLVEQKCPMDGDDPVDVLKEN 367
++ DA + E + E L + ++ ++ P D + V +E+
Sbjct: 157 DIEDAGNTVEVKIEPIDLDDVDEAIDGN-PETNLDQIVVKRED 198
Score = 62 (26.9 bits), Expect = 5.0e-85, Sum P(3) = 5.0e-85
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 691 EKLGKRKLKEVAK-LSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEM 749
++L K LKE + SH + D+ + +A E K C + L +K + E
Sbjct: 807 KELMKNVLKERRRWCSHTG-ARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEA 865
Query: 750 SKLRKQLLHLL 760
KLR+QL +++
Sbjct: 866 RKLRQQLTNIV 876
Score = 59 (25.8 bits), Expect = 2.2e-34, Sum P(3) = 2.2e-34
Identities = 29/127 (22%), Positives = 60/127 (47%)
Query: 271 ENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDAL 330
E+ GN V EP I++ +++EA I G + E D+ ED + D+ ++ AL
Sbjct: 159 EDAGNTVEVKIEP-----IDLDDVDEA--IDG-NPETNLDQIVVKREDDEESDNEDILAL 210
Query: 331 SDSETESETEILGEDEKLVEQ---KCPMDGDDP--VDVLKENWSLGSLKLAFEVLSGKNA 385
+ + +++ E K +++ + P+ ++ V+ + EN V+ G+
Sbjct: 211 PTTTVINRKKVIVERSKEIQKSRAELPIFAEEMRIVEAINEN--------LVTVVCGETG 262
Query: 386 SGPSSQM 392
SG ++Q+
Sbjct: 263 SGKTTQI 269
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 477 (173.0 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 136/379 (35%), Positives = 204/379 (53%)
Query: 6 PSSLQRPLAAPIV-VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKT 64
P++ +P P V V V R E++ R LPI+ EQ IMEA+N+N V+ICGETG GKT
Sbjct: 213 PAASSKPSCKPAVYVPVDRSPEIQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKT 272
Query: 65 TQVPQFLFEAGFGSNRCS---SRSGRIG-VTQPRRVAV-LATAKRV-AFELGLHLGKEVG 118
TQVPQFL+EAG+ S+ + R+ V+ +RVA + + RV ++++
Sbjct: 273 TQVPQFLYEAGYTSSNGIIGITEPRRVAAVSMSQRVAKEMNLSHRVVSYQIRYEGNTTDE 332
Query: 119 FQVRHDKKIGDSCSIKFMTDGILLRELKALY--EKQQQLLRSGQCIEPKDRV-------- 168
Q+ K + D +K + LL + K + E ++ + + I R+
Sbjct: 333 TQI---KFMTDGVLLKEVQKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKG 389
Query: 169 FPLKLILMSATLRVEDFISGGRLFRN-PPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKK 227
PLKLI+MSATLRVEDF RLF PP+++V RQFPVTVHF+K+T + DY G+ ++K
Sbjct: 390 LPLKLIIMSATLRVEDFTENTRLFAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRK 449
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATK 287
V IH+ LP GGILVF+TGQ EV LC +LRKA +++ ++ ++ + E K
Sbjct: 450 VCKIHRMLPSGGILVFLTGQAEVHSLCRRLRKAFPFQKNSTAGDDDDDRKESVEEMRKFK 509
Query: 288 DINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDID-DNELDALSDSETESETEI-LGED 345
++ + F+ D ++ D+ D D D E D D S+ ++ LG+
Sbjct: 510 KSRRRKKGDRFQTL---PRINLDNYAVVPVDEGDEDRDAETD---DDIAGSDVDLDLGDG 563
Query: 346 EKLVEQKCPMDGDDPVDVL 364
+ E+K D P+ VL
Sbjct: 564 DSEEEEKS--DSSLPLYVL 580
Score = 436 (158.5 bits), Expect = 2.1e-83, Sum P(2) = 2.1e-83
Identities = 122/326 (37%), Positives = 166/326 (50%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLPLY++L Q +VF G RL VV+TNVAETSLTIPGIKYVVD G+ K + Y+
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYD 636
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ S+ + WIS+ HCYRLYSSAVF + FS EI+K PV+
Sbjct: 637 KITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMDF-EKFSAPEITKRPVE 695
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDS---NGRLTALGKAMAHY 613
++L MK++NI+KV NFPFPTPP AL AE L AL AL GRL A
Sbjct: 696 DLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLSC 755
Query: 614 PMSPRHSRMLLTLIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQLEGTQTNSNDSE 673
P+SP R++ T + YA+ P+ + + T E
Sbjct: 756 PISPL-GRVMATFPVAPR---YAKMLALSRQHDCL--------PYTITIVSAMTVR---E 800
Query: 674 L-EERDNALDSEDPMCRQEKLGKR-KLKEVAKLSHAKFS-NPTSDVLTVAYALQCFELSK 730
L EE D SE+ + + GK+ +L ++ ++ + S D++ + A+ E S
Sbjct: 801 LFEEFDRPAASEEETVKLK--GKKGRLVQMQRIWAGQGSLQKLGDLMVMLGAVGACEYSG 858
Query: 731 SPVEFCNEYALHLKTMEEMSKLRKQL 756
+FC E L K M E+ +LR QL
Sbjct: 859 CTPKFCEENGLRYKAMLEIRRLRGQL 884
Score = 48 (22.0 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 331 SDSETESETEILGEDEKLVEQK 352
SDSE E E E G +E+ E+K
Sbjct: 157 SDSEPEPEGESSGSEEEKKEEK 178
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 478 (173.3 bits), Expect = 3.0e-82, Sum P(2) = 3.0e-82
Identities = 141/361 (39%), Positives = 203/361 (56%)
Query: 2 TGNLPSSLQRPLAAPIV-VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETG 60
T S+L RP + P V + V+R E++ R LPI+ EQ IMEAV ++ VIICGETG
Sbjct: 217 TPTAASALVRPPSKPAVFIPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIICGETG 276
Query: 61 CGKTTQVPQFLFEAGFGSNRCS---SRSGRIG-VTQPRRVA--VLATAKRVAFELGL--H 112
GKTTQVPQFL+EAG+ S+ + R+ V +RVA + + + V++++ +
Sbjct: 277 SGKTTQVPQFLYEAGYSSDNSVIGVTEPRRVAAVAMSQRVAKEMNLSPRVVSYQIRYEGN 336
Query: 113 LGKEVGFQVRHD----KKIG-DSCSIKFMTDGILLREL--KALY-EKQQQLLRSGQCIEP 164
+ +E + D K+I D +K+ +++ E +++Y + LL C+
Sbjct: 337 VTEETRIKFMTDGVLLKEIQKDFLLLKYKV--VIIDEAHERSVYTDILIGLLSRIVCLRE 394
Query: 165 KDRVFPLKLILMSATLRVEDFISGGRLFRNPP-IIEVPTRQFPVTVHFSKRTEIVDYIGQ 223
K R PLKL++MSATLRVEDF RLF PP +I+V +RQFPVTVHF+KRT + DY G+
Sbjct: 395 K-RHLPLKLLIMSATLRVEDFTQNQRLFTQPPPVIKVESRQFPVTVHFNKRTPLEDYSGE 453
Query: 224 AYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEP 283
++KV IH+ LP GGILVF+TGQ EV LC +LR+A L K +Q + E
Sbjct: 454 CFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRRAFP--LTRHRPPEKDDQRDSVEET 511
Query: 284 NATKDINMKEINEAFEIQGYSTEQ-QTDRFSSY-----DED-QFDIDDNELDAL-SDSET 335
K K A + Q + Q D +S DED + ++DD E +AL SD +
Sbjct: 512 RRFK----KSRARAKKAQAMTLPQISLDSYSVLPAGEGDEDREAEMDDEEEEALGSDLDL 567
Query: 336 E 336
+
Sbjct: 568 D 568
Score = 424 (154.3 bits), Expect = 3.0e-82, Sum P(2) = 3.0e-82
Identities = 93/202 (46%), Positives = 125/202 (61%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLPLY++L Q +VF+ EG RL VV+TNVAETSLTIPGIKYVVD G+ K + Y+
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ S+ + W+S+ HCYRLYSSAVF + + EI++ PV+
Sbjct: 646 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDF-EKYPPPEITRRPVE 704
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDS-----------NGRL-- 603
++L MK++NI+KV NFPFPTPP V AL+ AE L AL AL + RL
Sbjct: 705 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRLSC 764
Query: 604 --TALGKAMAHYPMSPRHSRML 623
T LG+ MA +P++PR+++ML
Sbjct: 765 PITELGRTMATFPVAPRYAKML 786
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 470 (170.5 bits), Expect = 5.3e-82, Sum P(2) = 5.3e-82
Identities = 135/350 (38%), Positives = 185/350 (52%)
Query: 9 LQRPLAAPIV-VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQV 67
L R LA P V + V+R E++ R LPI+ EQ IMEAV ++ VI+CGETG GKTTQV
Sbjct: 13 LPRALAKPAVFIPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQV 72
Query: 68 PQFLFEAGFGSNRCS---SRSGRIG-VTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRH 123
PQFL+EAGF S + R+ V +RVA + + V + R
Sbjct: 73 PQFLYEAGFSSEDSIIGVTEPRRVAAVAMSQRVAKEMNLSQRVVSYQIRYEGNVTEETRI 132
Query: 124 DKKIGDSCSIK-FMTDGILLR-ELKALYEKQQQLLRSGQCIEPKDRV--------FPLKL 173
K + D +K D +LLR ++ + E ++ + + I R+ PLKL
Sbjct: 133 -KFMTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKL 191
Query: 174 ILMSATLRVEDFISGGRLF-RNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIH 232
++MSATLRVEDF RLF + PP+I+V +RQFPVTVHF+KRT + DY G+ ++KV IH
Sbjct: 192 LIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIH 251
Query: 233 KRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVN-SSKENKGNQVVADSEPNATKDINM 291
+ LP GGILVF+TGQ EV LC +LRKA K++ V +
Sbjct: 252 RMLPAGGILVFLTGQAEVHALCRRLRKAFPPSRARPQEKDDDQKDSVEEMRKFKKSRARA 311
Query: 292 K----EINEAFEIQGYST----EQQTDRFSSYDEDQFDID-DNELDALSD 332
K E+ + YS E DR + DE++ +D D +LD L D
Sbjct: 312 KKARAEVLPQINLDHYSVLPAGEGDEDREAEVDEEEGALDSDLDLD-LGD 360
Score = 427 (155.4 bits), Expect = 5.3e-82, Sum P(2) = 5.3e-82
Identities = 94/202 (46%), Positives = 125/202 (61%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLPLY++L Q +VF+ EG RL VV+TNVAETSLTIPGIKYVVD G+ K + Y+
Sbjct: 375 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 434
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ S+ + W+S+ HCYRLYSSAVF + F EI++ PV+
Sbjct: 435 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDF-EQFPPPEITRRPVE 493
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALD-----------SNGRL-- 603
++L MK++N++KV NFPFPTPP V AL+ AE L AL AL RL
Sbjct: 494 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 553
Query: 604 --TALGKAMAHYPMSPRHSRML 623
TALG+ MA +P++PR+++ML
Sbjct: 554 PITALGRTMATFPVAPRYAKML 575
Score = 43 (20.2 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 490 EKVKKYNSANGIESYEIQWI 509
E K Y G+ S E+QWI
Sbjct: 774 ETTKMY--MKGVSSVEVQWI 791
Score = 40 (19.1 bits), Expect = 2.9e-41, Sum P(2) = 2.9e-41
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 664 GTQTNSNDSELEERDNALDSE 684
G ++E++E + ALDS+
Sbjct: 333 GEGDEDREAEVDEEEGALDSD 353
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 470 (170.5 bits), Expect = 1.3e-81, Sum P(2) = 1.3e-81
Identities = 135/350 (38%), Positives = 185/350 (52%)
Query: 9 LQRPLAAPIV-VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQV 67
L R LA P V + V+R E++ R LPI+ EQ IMEAV ++ VI+CGETG GKTTQV
Sbjct: 226 LPRALAKPAVFIPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQV 285
Query: 68 PQFLFEAGFGSNRCS---SRSGRIG-VTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRH 123
PQFL+EAGF S + R+ V +RVA + + V + R
Sbjct: 286 PQFLYEAGFSSEDSIIGVTEPRRVAAVAMSQRVAKEMNLSQRVVSYQIRYEGNVTEETRI 345
Query: 124 DKKIGDSCSIK-FMTDGILLR-ELKALYEKQQQLLRSGQCIEPKDRV--------FPLKL 173
K + D +K D +LLR ++ + E ++ + + I R+ PLKL
Sbjct: 346 -KFMTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKL 404
Query: 174 ILMSATLRVEDFISGGRLF-RNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIH 232
++MSATLRVEDF RLF + PP+I+V +RQFPVTVHF+KRT + DY G+ ++KV IH
Sbjct: 405 LIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIH 464
Query: 233 KRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVN-SSKENKGNQVVADSEPNATKDINM 291
+ LP GGILVF+TGQ EV LC +LRKA K++ V +
Sbjct: 465 RMLPAGGILVFLTGQAEVHALCRRLRKAFPPSRARPQEKDDDQKDSVEEMRKFKKSRARA 524
Query: 292 K----EINEAFEIQGYST----EQQTDRFSSYDEDQFDID-DNELDALSD 332
K E+ + YS E DR + DE++ +D D +LD L D
Sbjct: 525 KKARAEVLPQINLDHYSVLPAGEGDEDREAEVDEEEGALDSDLDLD-LGD 573
Score = 427 (155.4 bits), Expect = 1.3e-81, Sum P(2) = 1.3e-81
Identities = 94/202 (46%), Positives = 125/202 (61%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLPLY++L Q +VF+ EG RL VV+TNVAETSLTIPGIKYVVD G+ K + Y+
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ S+ + W+S+ HCYRLYSSAVF + F EI++ PV+
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDF-EQFPPPEITRRPVE 706
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALD-----------SNGRL-- 603
++L MK++N++KV NFPFPTPP V AL+ AE L AL AL RL
Sbjct: 707 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 766
Query: 604 --TALGKAMAHYPMSPRHSRML 623
TALG+ MA +P++PR+++ML
Sbjct: 767 PITALGRTMATFPVAPRYAKML 788
Score = 46 (21.3 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 37/181 (20%), Positives = 73/181 (40%)
Query: 247 QREVEYLCSKLRKASKQLLVNSSKENKGNQVVAD-SEPNATKDINMKEINEAFEI-QG-- 302
++E + L K +K +++L K+++ +++ SE A+ + M+ ++ G
Sbjct: 66 KKEKKPLTKKEKKVLQKILEQKEKKSQRAEMLQKLSEVQAS-EAEMRLFYTTSKLGTGNR 124
Query: 303 -YSTEQQTDRFSSYDEDQFD-IDDNELDALSDSETESETEILGEDEKLVEQKCPMDGDDP 360
Y T+++ D + +++ + E E E E E +E++ +D +DP
Sbjct: 125 MYHTKEKADEVVAPGQEKISSLSGAHRKRRRWPSAEEEEEEEEESESELEEESELD-EDP 183
Query: 361 VDVLKENWSLGSLKLAFEVLSGKNASGPSSQMKLSTPAIPEQCTELPPTPTPEQCPELSS 420
E +G+ V A PSSQ + +P PP P P +
Sbjct: 184 AAEPAEA-GVGTT-----VAPLPPAPAPSSQPVPAGMTVPPPPAAAPPLPRALAKPAVFI 237
Query: 421 P 421
P
Sbjct: 238 P 238
Score = 43 (20.2 bits), Expect = 3.6e-41, Sum P(2) = 3.6e-41
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 490 EKVKKYNSANGIESYEIQWI 509
E K Y G+ S E+QWI
Sbjct: 987 ETTKMY--MKGVSSVEVQWI 1004
Score = 40 (19.1 bits), Expect = 7.4e-41, Sum P(2) = 7.4e-41
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 664 GTQTNSNDSELEERDNALDSE 684
G ++E++E + ALDS+
Sbjct: 546 GEGDEDREAEVDEEEGALDSD 566
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 463 (168.0 bits), Expect = 2.7e-81, Sum P(2) = 2.7e-81
Identities = 132/356 (37%), Positives = 184/356 (51%)
Query: 7 SSLQRPLAAPIV-VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTT 65
S+ RP P V + V+R E++ R LPI+ EQ IMEAV ++ VI+CGETG GKTT
Sbjct: 218 STPARPPVKPAVFIPVNRTPEMQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTT 277
Query: 66 QVPQFLFEAGFGSNRCS---SRSGRIG-VTQPRRVAVLATAKRVAFELGLHLGKEVGFQV 121
QVPQFL+EAG+ S+ + R+ V +RVA + + V +
Sbjct: 278 QVPQFLYEAGYSSDNSIIGITEPRRVAAVAMSQRVAKEMNLSQRVVSYQIRYEGNVTEET 337
Query: 122 RHDKKIGDSCSIK-FMTDGILLRELKALYEKQQQ----------LLRSGQCIEPKDRVFP 170
R K + D +K D +LLR L ++ + LL + K R P
Sbjct: 338 RI-KFMTDGVLLKEIQKDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAK-RHLP 395
Query: 171 LKLILMSATLRVEDFISGGRLF-RNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVM 229
LKL++MSATLRVEDF RLF + PP+I+V +RQFPVTVHF+KRT + DY G+ ++KV
Sbjct: 396 LKLLIMSATLRVEDFTQNQRLFPQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVC 455
Query: 230 SIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDI 289
IH+ LP GGILVF+TGQ EV LC +LR+A ++ V +
Sbjct: 456 KIHRMLPAGGILVFLTGQAEVHALCRRLRRAFPHTRRRPPEKEDQEDSVEEMRKFKKSRT 515
Query: 290 NMKEINEAF----EIQGYST----EQQTDRFSSYDEDQFDIDDNELDA-LSDSETE 336
+K+ A + YS E DR + DE++ ++LD L D T+
Sbjct: 516 RVKKAQAAMLPQISLDSYSVLPAGEGDEDREAEMDEEEEAALGSDLDLDLGDDGTD 571
Score = 432 (157.1 bits), Expect = 2.7e-81, Sum P(2) = 2.7e-81
Identities = 93/202 (46%), Positives = 127/202 (62%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLPLY++L Q +VF+ EG RL VV+TNVAETSLTIPGIKYVVD G+ K + Y+
Sbjct: 582 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 641
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ S+ + W+S+ HCYRLYSSAVF++ F EI++ PV+
Sbjct: 642 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDF-EQFPPPEITRRPVE 700
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGR-------------- 602
++L MK++NI+KV NFPFPTPP V AL+ AE L AL AL + +
Sbjct: 701 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQLQRSWLGC 760
Query: 603 -LTALGKAMAHYPMSPRHSRML 623
+TALG+ MA +P++PR+++ML
Sbjct: 761 PITALGRTMATFPVAPRYAKML 782
Score = 62 (26.9 bits), Expect = 1.0e-38, Sum P(2) = 1.0e-38
Identities = 36/169 (21%), Positives = 71/169 (42%)
Query: 247 QREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEI----QG 302
++E + L K RK +++L K+++ +++ + M+ ++ +
Sbjct: 66 KKEKKPLTKKERKMLQKILEQKEKKSQRAEMLQKLSEVQVSEAEMRLFYTTSKLGTGDRM 125
Query: 303 YSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEILGEDEKLVEQKCPMDGDDPVD 362
Y T +++D+ + +++ ETE E E E +E + P + P
Sbjct: 126 YHTREKSDKIEAQRQEKISSLSGAHRKRYHQETEEE-----ESEPSMESE-PEEA--PAT 177
Query: 363 VLKENWSLGSLKLAFEVLSGKNASGPSSQMKLS-TPAIPEQCTELPPTP 410
E + G+L A E +G ++ GPSSQ L+ T + P P P
Sbjct: 178 EPTEAGA-GTLPAAPE--AGTDSPGPSSQPSLARTTSAPPAAASTPARP 223
Score = 40 (19.1 bits), Expect = 5.0e-40, Sum P(2) = 5.0e-40
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 490 EKVKKYNSANGIESYEIQWI 509
E K Y G+ + E+QWI
Sbjct: 981 ETTKMY--MKGVSAVEVQWI 998
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 456 (165.6 bits), Expect = 2.3e-80, Sum P(2) = 2.3e-80
Identities = 124/344 (36%), Positives = 180/344 (52%)
Query: 17 IVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGF 76
+ + V R E++ R LP++ EQ IMEAV D+ V++CGETG GKTTQVPQFL+EAGF
Sbjct: 235 VFIPVERLPEIQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGF 294
Query: 77 GSNRCS---SRSGRIG-VTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS 132
S+ + R+ ++ RVA + V + K + D
Sbjct: 295 ASSGGIIGVTEPRRVAAISMSHRVATEMNLSSGVVSYQIRYEGNVTENTKI-KVMTDGVL 353
Query: 133 IKFMTDGILLRELKALY--EKQQQLLRSGQCIEPKDRVFPL--------KLILMSATLRV 182
+K + LL++ + E ++ + + I R+ PL KLI+MSATLRV
Sbjct: 354 LKEIQRDFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRV 413
Query: 183 EDFISGGRLFRNPP-IIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGIL 241
EDF RLF +PP +I+V RQF VTVHF+KRT + DY G+ ++K+ IH+ LP GGIL
Sbjct: 414 EDFTENKRLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGIL 473
Query: 242 VFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAF--- 298
VF+TGQ EV +C +LRKA K N+ + + ++E + K K+ N +
Sbjct: 474 VFLTGQAEVHSVCRRLRKAFPY------KPNREHTDMMETEEDLKKSKRAKKKNVSLPRI 527
Query: 299 EIQGYST----EQQTDRFSSYDEDQFDIDDNELDALSDSETESE 338
+ YS E DR + DED + D EL+ +T+ E
Sbjct: 528 NLDNYSALPVDEGDEDRQAGIDEDDGEGSDLELELGDHPDTDHE 571
Score = 431 (156.8 bits), Expect = 2.3e-80, Sum P(2) = 2.3e-80
Identities = 116/323 (35%), Positives = 160/323 (49%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLPLY++L Q +VF G RL VV+TNVAETSLTIPGIKYVVD GR K + Y+
Sbjct: 580 LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYD 639
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ S+++ WIS+ HCYRLYSSAVF + FS AEI++ PV+
Sbjct: 640 RVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGDFSL-FSEAEITRRPVE 698
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDS---NGRLTALGKAMAHY 613
+VL MK +NI+KV NFPFPTPP AL+ AE L +L AL+ +GRL+ + KA
Sbjct: 699 DLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKARLSC 758
Query: 614 PMSPRHSRMLLTLIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQLEGTQTNSNDSE 673
P+SP M + K A +++ + T
Sbjct: 759 PISPLGRAMAAFPVAPRYAKMLA------------LGRQQGCMQYIITIVSAMTVREI-- 804
Query: 674 LEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPV 733
E+ D SE+ + R ++ + S D++ + A+ E +
Sbjct: 805 FEDYDRPAGSEEENVKMSGKKARSVQMRRLWAGQGASLLLGDLMVLLGAVGACEFAGLTP 864
Query: 734 EFCNEYALHLKTMEEMSKLRKQL 756
+FC E L K M E+ +LR QL
Sbjct: 865 QFCEENGLRFKAMLEIRRLRGQL 887
Score = 65 (27.9 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 32/126 (25%), Positives = 51/126 (40%)
Query: 252 YLCSKLRKASKQLLVNSSKENKGNQVVADS-EPNATKDINMKEINEAFEIQGYSTEQQTD 310
Y +KL K + S N+G + S + ++ N K EA E + E +
Sbjct: 113 YTTAKLGTGGKLYHIKESV-NEGQDGGSSSVKISSLSGANRKRRREADE-EEEENESEMS 170
Query: 311 RFSSYDEDQFDIDDNELDALSDSETESETEILGEDEKLVEQKCPMDGDDPVDVLKENWSL 370
S D+D + D +E + SE E TE + + L E+ P + D + E W+
Sbjct: 171 ESSEDDDDSEESDSSEEEKEKISE-EKHTEEQ-QQQVLKEETKPKEADMKEEKKAETWTK 228
Query: 371 GSLKLA 376
K A
Sbjct: 229 EDCKPA 234
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 520 (188.1 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 123/335 (36%), Positives = 183/335 (54%)
Query: 428 DNKRAGVGA--LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVV 485
+ + AG G + VLPLY++LP QLRVFE +G RLVV++TNVAETSLTIPGI+YV
Sbjct: 664 EEEEAGTGPSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVF 723
Query: 486 DTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDF 545
D+GR K +KY+ G++S+E+ WISK HC+RLYSSAV+ L +F
Sbjct: 724 DSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLDEF 783
Query: 546 SCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA 605
+ E+ + ++GVVL +KSMN+ V NFPFPTPPE +LV++E+ LK + A+ GR+T
Sbjct: 784 ALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLLKYISAVSEEGRVTQ 843
Query: 606 LGKAMAHYPMSPRHSRMLLTLIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQLEGT 665
+G M+ +P+SPR SR+LL L Y P + E
Sbjct: 844 VGYTMSIFPLSPRFSRILL-LGHQHDCLHYTVTLVAALSAAEIFIPENQAIPQLAAKEDD 902
Query: 666 QTNSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQC 725
+ND + +E +Q + +R+ V K + F + SD + + L
Sbjct: 903 AIRTNDD--------IQAET---KQAAI-RRQFNAVNK--NFCFLDDKSDAIKMLQVLGE 948
Query: 726 FELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
F + ++C + + K ++E KLR+Q++ LL
Sbjct: 949 FAHEPTE-KWCESHFVRFKVLKEAQKLRQQIVQLL 982
Score = 346 (126.9 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 68/127 (53%), Positives = 95/127 (74%)
Query: 19 VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGS 78
V V+R E+++ R LP+V EQ IMEA+++N+ V++CG TG GKTTQ+PQFLFEAG+GS
Sbjct: 342 VAVTRSPEIQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGS 401
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTD 138
S G IG+TQPRRVA ++ +KRVA ELG H ++VG+Q+R + + ++KFMTD
Sbjct: 402 PD-SPTPGMIGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTD 459
Query: 139 GILLREL 145
G+LLRE+
Sbjct: 460 GVLLREV 466
Score = 254 (94.5 bits), Expect = 7.5e-70, Sum P(2) = 7.5e-70
Identities = 84/277 (30%), Positives = 137/277 (49%)
Query: 103 KRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKALYEKQQQLLRSGQCI 162
+ VA +L L + H++ + I G+L R +K E Q+
Sbjct: 464 REVAQDLALRKYSAIVVDEAHERSVNTDILI-----GMLSRIIKLRAEMAQE-------- 510
Query: 163 EPKDRVFPLKLILMSATLRVEDFISGGRLFRNPP-IIEVPTRQFPVTVHFSKRTEIVDYI 221
+P V PLKL++MSATLR+ED LF PP ++EV RQ+PVT+HF+++T DY+
Sbjct: 511 DPT--VKPLKLVIMSATLRIEDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHH-DYV 567
Query: 222 GQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLL-VNSSKENKGNQVVAD 280
+A++K+ HK+LP GG+LVF+TGQ E+ L +L+ + VN+ + Q D
Sbjct: 568 EEAFRKISRGHKKLPPGGMLVFLTGQNEITQLSKRLKLQFNGVTSVNAPQVRISTQ---D 624
Query: 281 SEPNATKDINMKEINEAFEI-QGYSTEQQTDRFSSYDEDQFDIDDNELDA-LSDSETESE 338
+ P +D+ + +A ++ Q + + +E++F I++ E S
Sbjct: 625 A-PMEAEDV---DFGDALDVDQDDYDDGEGSEGDENEEEEFKIEEEEAGTGPSRMHVLPL 680
Query: 339 TEILGEDEKLVEQKCPMDGDDPVDVLKENWSLGSLKL 375
+L E+L + P DG V VL N + SL +
Sbjct: 681 YSLLPTKEQLRVFEPPPDGSRLV-VLATNVAETSLTI 716
Score = 53 (23.7 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 21/126 (16%), Positives = 54/126 (42%)
Query: 222 GQAYKKVMSIHKRLPQGGILVFVTGQREVE-YLCSKLRKA-SKQLLVNSSKENKGNQVVA 279
G + + L G+ V + +E Y+ +KL+K +++LL + + +
Sbjct: 41 GHVAAETARLKANLRDKGLPVSAKKAKRLEKYIEAKLKKEENRELLAKLAANKVDTSLFS 100
Query: 280 DSEP-NATKDINMKEINEAF--EIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSDSETE 336
S+ T+ + +++A E G + ++ ++ D E D+ S+++ +
Sbjct: 101 SSKTLGQTRQTKRQALSQALNEERAGLPGNATREELLYEKREERNVSDQEEDSESEAQAQ 160
Query: 337 SETEIL 342
+ ++L
Sbjct: 161 PKPDVL 166
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 422 (153.6 bits), Expect = 5.3e-71, Sum P(3) = 5.3e-71
Identities = 103/253 (40%), Positives = 148/253 (58%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LPI +++E+++AV+DN +++ GETG GKTTQV Q+L EAG+ + G
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGY------TTKG 561
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
+IG TQPRRVA ++ AKRVA E G LG+EVG+ +R + G IK+MTDG+LLRE+
Sbjct: 562 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 621
Query: 147 A-----------LYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRL 191
L E ++ + + G + R L+LI+ SATL E F SG
Sbjct: 622 IDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKF-SG--Y 678
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F N I +P R FPV + ++K+ E DY+ A V+ IH P+G ILVF+TGQ E++
Sbjct: 679 FFNCNIFTIPGRTFPVEILYTKQPE-TDYLDAALITVLQIHLTEPEGDILVFLTGQEEID 737
Query: 252 YLCSKLRKASKQL 264
C L + K L
Sbjct: 738 SACQSLYERMKGL 750
Score = 360 (131.8 bits), Expect = 5.3e-71, Sum P(3) = 5.3e-71
Identities = 79/194 (40%), Positives = 109/194 (56%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G+R VVV+TN+AE SLTI GI YVVD G K
Sbjct: 754 VPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQN 813
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YN G+ES I IS+ CYRLY+ + + N +P S EI ++
Sbjct: 814 VYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRI 873
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ L MK+M I+ + +F F PP+ AL+ A L +L ALD G LT LG+ MA +
Sbjct: 874 NLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEF 933
Query: 614 PMSPRHSRMLLTLI 627
P+ P S+MLL +
Sbjct: 934 PLEPPLSKMLLASV 947
Score = 65 (27.9 bits), Expect = 5.3e-71, Sum P(3) = 5.3e-71
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
R+ + A AKF P D LT+ + ++ +C E + +++ +RKQ
Sbjct: 972 REKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQ 1031
Query: 756 LLHLL 760
LL ++
Sbjct: 1032 LLSIM 1036
Score = 57 (25.1 bits), Expect = 3.6e-32, Sum P(3) = 3.6e-32
Identities = 36/142 (25%), Positives = 52/142 (36%)
Query: 275 NQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSDSE 334
N V P K ++ E EA ++ S + D F YDED D L +E
Sbjct: 333 NDVAPSRRP--LKKMSSPERWEAKQLIA-SGVLRVDEFPMYDED----GDGMLYQEEGAE 385
Query: 335 TESETEILGEDEK-LVEQKCPMDGD-DPVDVLKE-NWSLGSLKLAFEVLSGKNASGPSSQ 391
E E E + EDE ++ + D PV + K SL L+ + Q
Sbjct: 386 EELEIE-MNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTKERREMREQQ 444
Query: 392 MKLSTPAIPEQCTELPPTPTPE 413
+ +IP+ P PE
Sbjct: 445 QRTMLDSIPKDLNRPWEDPMPE 466
Score = 43 (20.2 bits), Expect = 7.0e-38, Sum P(3) = 7.0e-38
Identities = 29/109 (26%), Positives = 44/109 (40%)
Query: 386 SGPSSQMKLSTPAIPEQCTELPPTPTPE-QCPEL--SSPDVEKMGDNKRAGVGALCVLPL 442
+GP +L T + E+PPT PE Q L ++ ++ MG N +
Sbjct: 844 TGPGKCYRLYTESAYRN--EMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQP 901
Query: 443 YAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYV---VDTG 488
A++ A QL + E L + +AE L P K + VD G
Sbjct: 902 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLG 950
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 405 (147.6 bits), Expect = 9.5e-70, Sum P(3) = 9.5e-70
Identities = 98/258 (37%), Positives = 150/258 (58%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
S+ ++ R+ LPI ++M+ + +N+ +II GETG GKTTQ+ Q+L+E G+
Sbjct: 647 SKTKTIKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGY----- 701
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
S+ G+IG TQPRRVA ++ AKRV+ E+ + LG EVG+ +R + + +IK+MTDGIL
Sbjct: 702 -SKFGKIGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGIL 760
Query: 142 LRE---------LKALY--EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE A+ E ++ L + G + R + +KLI+ SAT+ + F
Sbjct: 761 LRESFNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKF- 819
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
F + P+ +P R FPV V +SK T DY+ A K+++SIH G ILVF+TG
Sbjct: 820 --SMFFGDVPVFTIPGRTFPVDVLWSK-TPCEDYVDSAVKQILSIHVTQGVGDILVFMTG 876
Query: 247 QREVEYLCSKLRKASKQL 264
Q ++E C+ + + KQL
Sbjct: 877 QEDIETTCATVEERIKQL 894
Score = 340 (124.7 bits), Expect = 9.5e-70, Sum P(3) = 9.5e-70
Identities = 71/192 (36%), Positives = 108/192 (56%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP+Y+ LP+ Q ++FE G R +++TN+AETSLT+ GI YV+DTG K+K YN
Sbjct: 901 LTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDTGYCKLKVYN 960
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G++S ++ ISK CYRLY+ + F L D + EI + +
Sbjct: 961 PRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNIPEIQRTNLG 1020
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVL +KSM + + +F F PP ++ + L L ALD G++T LGK M+ +P+
Sbjct: 1021 NVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLD 1080
Query: 617 PRHSRMLLTLIQ 628
P S+M++ Q
Sbjct: 1081 PPLSKMVIVAEQ 1092
Score = 96 (38.9 bits), Expect = 9.5e-70, Sum P(3) = 9.5e-70
Identities = 19/62 (30%), Positives = 38/62 (61%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
+E + S KF P SD LT+ + Q ++++ ++C E+ +H+K M ++ ++R QLL
Sbjct: 1119 EEESDASREKFFVPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIKAMRKVREVRGQLLD 1178
Query: 759 LL 760
++
Sbjct: 1179 IM 1180
Score = 43 (20.2 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 21/70 (30%), Positives = 28/70 (40%)
Query: 341 ILGEDEKLVEQKCPMDGDDPVDVLKENWSLGSLKLAFEVLSGKNASGP---SSQMKLSTP 397
I EDEK EQ+ G + KE + + K + S + P SS+ T
Sbjct: 592 IKSEDEKEKEQQLANGGGGGEQIDKETGEVLNYKAQSQFASHLTPNKPTEGSSEFS-KTK 650
Query: 398 AIPEQCTELP 407
I EQ LP
Sbjct: 651 TIKEQREFLP 660
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 398 (145.2 bits), Expect = 2.4e-69, Sum P(3) = 2.4e-69
Identities = 97/253 (38%), Positives = 143/253 (56%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LPI + + ++AV+++ +++ GETG GKTTQ+ Q+L EAG+G+ G
Sbjct: 501 IKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTR------G 554
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-- 144
+IG TQPRRVA ++ +KRVA E G LG+EVG+ +R + IKFMTDGILLRE
Sbjct: 555 KIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECL 614
Query: 145 ----LKA-----LYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRL 191
L A L E ++ + + G + R LK+++ SATL E F +
Sbjct: 615 LDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKF---SKY 671
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F N + +P R FPV + ++K E DY+ + VM IH P G IL+F+TGQ E++
Sbjct: 672 FMNAQLFIIPGRTFPVDIRYTKDPE-ADYLDASLITVMQIHLSEPPGDILLFLTGQEEID 730
Query: 252 YLCSKLRKASKQL 264
C L + K L
Sbjct: 731 AACQILYERMKSL 743
Score = 369 (135.0 bits), Expect = 2.4e-69, Sum P(3) = 2.4e-69
Identities = 79/196 (40%), Positives = 111/196 (56%)
Query: 432 AGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREK 491
+ V L +LP+Y+ LP+ Q ++FE G R VV++TN+AETSLTI GI YV+D G K
Sbjct: 745 SNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSK 804
Query: 492 VKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEIS 551
K +N NG++S + IS+ CYRLY+ + F N + S EI
Sbjct: 805 QKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQ 864
Query: 552 KVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
+ + VL MK+M I+ + NF F PP V LV A L +L ALD G LT LG+ MA
Sbjct: 865 RTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMA 924
Query: 612 HYPMSPRHSRMLLTLI 627
+P+ P+ S+ML+ +
Sbjct: 925 EFPLDPQLSKMLIASV 940
Score = 67 (28.6 bits), Expect = 2.4e-69, Sum P(3) = 2.4e-69
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
++ + +A AKF P D LT+ + ++ SK +C E + +++ +RKQ
Sbjct: 965 KEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQ 1024
Query: 756 LLHLL 760
L+ ++
Sbjct: 1025 LITIM 1029
Score = 41 (19.5 bits), Expect = 1.3e-66, Sum P(3) = 1.3e-66
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 692 KLGKRKLKEVAKLSHAKFSNPTS 714
K+ KRK KE + + K+++P +
Sbjct: 1131 KISKRKRKEKIEPLYDKYNDPNA 1153
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 394 (143.8 bits), Expect = 8.2e-68, Sum P(3) = 8.2e-68
Identities = 105/279 (37%), Positives = 150/279 (53%)
Query: 1 MTGNLPSSLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETG 60
+T PS Q A I ++ R+ LP+ + ++ +EAV+ N +++ GETG
Sbjct: 477 LTSETPSWRQATRNANISYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETG 536
Query: 61 CGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQ 120
GKTTQ+ Q+L E G+ S+ S IG TQPRRVA ++ AKRVA E+G +G+EVG+
Sbjct: 537 SGKTTQITQYLAEEGYTSD-----SKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYT 591
Query: 121 VRHDKKIGDSCSIKFMTDGILLRE--LKALYEKQQQLL--RSGQCIEPKDRVF------- 169
+R + K IK+MTDG+L RE + L K ++ + + D +F
Sbjct: 592 IRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTV 651
Query: 170 ---P-LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAY 225
P LKLI+ SATL E F S F PI +P R +PV + ++K+ E DY+ A
Sbjct: 652 LKRPDLKLIVTSATLDAERFSS---YFYKCPIFTIPGRSYPVEIMYTKQPE-ADYLDAAL 707
Query: 226 KKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
VM IH G ILVF+TGQ E++ C L + SK L
Sbjct: 708 MTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKML 746
Score = 338 (124.0 bits), Expect = 8.2e-68, Sum P(3) = 8.2e-68
Identities = 74/193 (38%), Positives = 111/193 (57%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP+Y+ LP+ Q R+FE G R VV++TN+AETSLTI GI YVVD G K ++
Sbjct: 753 LVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFD 812
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNN-ILPDFSCAEISKVPV 555
G++S + IS+ CYRLY+ + + N +LP EI + +
Sbjct: 813 PKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPS-PIPEIQRQNL 871
Query: 556 DGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
+L++K+M I+ + NF F PP ++ A + L AL ALD G LT LG+ MA +PM
Sbjct: 872 SHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPM 931
Query: 616 SPRHSRMLLTLIQ 628
P+ S++L+T ++
Sbjct: 932 EPQLSKVLITSVE 944
Score = 88 (36.0 bits), Expect = 8.2e-68, Sum P(3) = 8.2e-68
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
R+ ++ A A+F+NP SD LT+ +++++ +C E+ + + M +RKQ
Sbjct: 968 REKQQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQ 1027
Query: 756 LLHLL 760
L+ L+
Sbjct: 1028 LIRLM 1032
>UNIPROTKB|F1RFN6 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:CU468581
Ensembl:ENSSSCT00000010698 Uniprot:F1RFN6
Length = 1158
Score = 313 (115.2 bits), Expect = 3.0e-67, Sum P(3) = 3.0e-67
Identities = 81/187 (43%), Positives = 105/187 (56%)
Query: 161 CIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNPP-IIEVPTRQFPVTVHFSKRTEIVD 219
C+ K R PLKL++MSATLRVEDF RLF PP +I+V +RQFPVTVHF+KRT + D
Sbjct: 406 CLRAK-RHLPLKLLIMSATLRVEDFTQNQRLFAQPPPVIKVESRQFPVTVHFNKRTPLED 464
Query: 220 YIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVA 279
Y G+ ++KV IH+ LP GGILVF+TGQ EV LC +LR+A L K +Q +
Sbjct: 465 YSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRRAFP--LARHRLPEKDDQKDS 522
Query: 280 DSEPNATKDINMKEINEAFEIQGYSTEQ-QTDRFSSYDEDQFDIDDNELDALSDSETESE 338
E K K A + Q + Q D +S + D +D E +E + E
Sbjct: 523 VEEMRKFK----KSRARARKAQAATLPQISLDNYSVLPVGEGD-EDRE------AEMDEE 571
Query: 339 TEILGED 345
E LG D
Sbjct: 572 EEALGSD 578
Score = 307 (113.1 bits), Expect = 3.0e-67, Sum P(3) = 3.0e-67
Identities = 83/211 (39%), Positives = 117/211 (55%)
Query: 7 SSLQRPLAAP-IVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTT 65
S+L RP A P I + V+R E++ R LPI+ EQ IMEAV ++ VI+CGETG GKTT
Sbjct: 234 SALARPPAKPAIFIPVNRSPEMQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTT 293
Query: 66 QVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGL-HLGKEVGFQVRHD 124
QVPQFL+EAG+ +R S +G P + + ++ H + V +Q+R++
Sbjct: 294 QVPQFLYEAGY--SREGGMSPPVGPFNPCQFITQGSKMKILSPRACPH--RVVSYQIRYE 349
Query: 125 KKIGDSCSIKFMTDGILLREL---------KALY--EKQQQLLRSGQCIEPKDRV----- 168
+ + IKFMTDG+LL+E+ K L E ++ + + I R+
Sbjct: 350 GNVTEETRIKFMTDGVLLKEIQKDFLLLKYKVLIIDEAHERSVYTDILIGLLSRIVCLRA 409
Query: 169 ---FPLKLILMSATLRVEDFISGGRLFRNPP 196
PLKL++MSATLRVEDF RLF PP
Sbjct: 410 KRHLPLKLLIMSATLRVEDFTQNQRLFAQPP 440
Score = 202 (76.2 bits), Expect = 3.0e-67, Sum P(3) = 3.0e-67
Identities = 49/108 (45%), Positives = 68/108 (62%)
Query: 531 RLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERC 590
RLYSSAVF + F EI++ PV+ ++L MK++NI+KV NFPFPTPP + AL+ AE
Sbjct: 682 RLYSSAVFEDF-EKFPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSIEALIAAEEL 740
Query: 591 LKALEALDS-----------NGRL----TALGKAMAHYPMSPRHSRML 623
L AL AL + RL T LG+ MA +P++PR+++ML
Sbjct: 741 LIALGALQAPPKTERMKQLQRSRLSCPITVLGRTMATFPVAPRYAKML 788
Score = 50 (22.7 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 43/172 (25%), Positives = 66/172 (38%)
Query: 247 QREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTE 306
++E + L K RK +++L KE K + A EP +++ +++EA Y+T
Sbjct: 66 KKEKKPLTKKERKMLQRIL--DQKEKKSQEPEASGEP--LLNLSEVQVSEAEMRLFYTTS 121
Query: 307 Q--QTDR------FSSYDEDQFDIDDNELDALS---------DSETESETEILGEDEKLV 349
+ DR F D+ ++ +LS DSE E+E E E E
Sbjct: 122 KLGTGDRMYCTKDFLGRKPDELAAQGQKISSLSGACRKRRHQDSEEEAEEE---EGESSA 178
Query: 350 EQKCPMDGDDPVDVLKE-NWSLGSLKLAFEVLSGKNASGPSSQMKLSTPAIP 400
E + + PV E + L LSG P TPA P
Sbjct: 179 ESELE---EAPVAKRVEATEGMAPAHLP-PTLSGAGGQSPVPSNPAGTPAAP 226
Score = 44 (20.5 bits), Expect = 4.2e-39, Sum P(3) = 4.2e-39
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 319 QFDIDDNELDALSDSETESETEILGEDEKLVEQKCPMD-GDDPVD 362
Q +D+ + + + + + E E + E+E+ + +D GDD D
Sbjct: 546 QISLDNYSVLPVGEGDEDREAE-MDEEEEALGSDLDLDLGDDGAD 589
Score = 40 (19.1 bits), Expect = 2.6e-50, Sum P(3) = 2.6e-50
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 490 EKVKKYNSANGIESYEIQWI 509
E K Y G+ + E+QWI
Sbjct: 989 ETTKMY--MKGVSTVEVQWI 1006
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 394 (143.8 bits), Expect = 1.6e-66, Sum P(3) = 1.6e-66
Identities = 95/241 (39%), Positives = 141/241 (58%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E++ R+ LPI ++++AV ++ ++I G+TG GKTTQ+PQ+L EAG+ ++
Sbjct: 396 ELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGY------TKR 449
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
G++G TQPRRVA ++ A RVA E+G+ LG EVG+ +R + D +K+MTDG+LLREL
Sbjct: 450 GKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREL 509
Query: 146 K-----ALY------EKQQQLLRSGQCIE-PKD--RVFP-LKLILMSATLRVEDFISGGR 190
A Y E ++ L + KD R P LKL++ SAT+ E F
Sbjct: 510 LGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSD--- 566
Query: 191 LFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREV 250
F PI P R++PV ++++ E DY+ A +++IH R P G ILVF TGQ E+
Sbjct: 567 YFDTAPIFSFPGRRYPVEINYTSAPE-ADYMDAAIVTILTIHVREPLGDILVFFTGQEEI 625
Query: 251 E 251
E
Sbjct: 626 E 626
Score = 373 (136.4 bits), Expect = 1.6e-66, Sum P(3) = 1.6e-66
Identities = 80/188 (42%), Positives = 110/188 (58%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L + P+YA LP+ Q ++FE EG R VV++TN+AETSLTI GIKYVVD G K+K YN
Sbjct: 646 LIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYN 705
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ES I ISK CYRLY++ +NN L + + E+ + +
Sbjct: 706 PRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLA 765
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVL +KS+ I + NF F PP ALV++ L AL AL+ G LT G+ MA +P+
Sbjct: 766 SVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLD 825
Query: 617 PRHSRMLL 624
P S+M++
Sbjct: 826 PMLSKMIV 833
Score = 39 (18.8 bits), Expect = 3.0e-29, Sum P(3) = 3.0e-29
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 325 NELDALSDSETESETEILGEDEKLVEQKCPMDGD 358
N L A++ +T+S TE++GE LV+ GD
Sbjct: 27 NYLIAMA-KKTKSPTELVGE---LVDYGFSSSGD 56
Score = 38 (18.4 bits), Expect = 1.6e-66, Sum P(3) = 1.6e-66
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 734 EFCNEYALHLKTMEEMSKLRKQLLHLL 760
++C E + +++M+ +R QL LL
Sbjct: 901 QWCYENYIQVRSMKRARDIRDQLEGLL 927
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 402 (146.6 bits), Expect = 3.2e-66, Sum P(3) = 3.2e-66
Identities = 92/254 (36%), Positives = 144/254 (56%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E+ R+DLP+ + + + + +N N +I+ GETG GKTTQ+PQF+ +A N R
Sbjct: 57 EILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRK 116
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+G TQPRRVA ++ ++RVA E+ + +G+EVG+ +R + +K++TDG+LLRE
Sbjct: 117 WLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREA 176
Query: 146 KA--LYEKQQQLL--RSGQCIEPKDRVF----------P-LKLILMSATLRVEDFISGGR 190
A L E+ + ++ + + D +F P LKL++MSATL E F
Sbjct: 177 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKF---QE 233
Query: 191 LFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREV 250
F P+++VP R PV + +++ E DY+ A + V+ IH P G ILVF+TG+ E+
Sbjct: 234 YFSGAPLMKVPGRLHPVEIFYTQEPER-DYLEAAIRTVVQIHMCEPPGDILVFLTGEEEI 292
Query: 251 EYLCSKLRKASKQL 264
E C K+ K L
Sbjct: 293 EDACRKINKEVSNL 306
Score = 326 (119.8 bits), Expect = 3.2e-66, Sum P(3) = 3.2e-66
Identities = 81/219 (36%), Positives = 116/219 (52%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFED----VKEGE---RLV 465
+ C +++ +V +GD VG + V+PLY+ LP A Q ++F+ + EG R +
Sbjct: 294 DACRKINK-EVSNLGDQ----VGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKI 348
Query: 466 VVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXX 525
VVSTN+AETSLTI GI YV+D G K K YN +ES + ISK
Sbjct: 349 VVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTR 408
Query: 526 XXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALV 585
C+RLY+ FNN L + EI + + VL +K + ID + +F F PP L+
Sbjct: 409 PGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLM 468
Query: 586 EAERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
A L L ALD G LT G+ M+ +P+ P+ S+ML+
Sbjct: 469 RALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLI 507
Score = 61 (26.5 bits), Expect = 3.2e-66, Sum P(3) = 3.2e-66
Identities = 15/69 (21%), Positives = 35/69 (50%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
R+ ++ A + A+F + D LT+ ++ + +C E ++ + M+ +R+Q
Sbjct: 535 REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQ 594
Query: 756 LLHLL--FN 762
L+ ++ FN
Sbjct: 595 LVRIMSRFN 603
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 388 (141.6 bits), Expect = 2.2e-65, Sum P(3) = 2.2e-65
Identities = 97/247 (39%), Positives = 141/247 (57%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ +RK LPI +++ AV D+ +II GETG GKTTQ+PQ+L EAG+ ++ G
Sbjct: 397 LQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGY------TKLG 450
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
++G TQPRRVA ++ A RVA E+G LG EVG+ +R + + +K+MTDG+LLREL
Sbjct: 451 KVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELL 510
Query: 147 A-----LY------EKQQQLLRSGQCIE-PKD--RVFP-LKLILMSATLRVEDFISGGRL 191
Y E ++ LR+ KD R P LKL++ SAT+ E F
Sbjct: 511 GEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSD---F 567
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F PI P R++PV + F+ E DY+ A V++IH + P G +LVF+ GQ E+E
Sbjct: 568 FDQAPIFRFPGRRYPVDICFTTAPE-ADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIE 626
Query: 252 YLCSKLR 258
+ L+
Sbjct: 627 AVEENLK 633
Score = 369 (135.0 bits), Expect = 2.2e-65, Sum P(3) = 2.2e-65
Identities = 84/206 (40%), Positives = 117/206 (56%)
Query: 423 VEKMGDNKRAGVGA----LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTI 478
VE+ +K G+G L + P+YA LP+ Q ++FE EG R VV++TN+AETSLTI
Sbjct: 628 VEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTI 687
Query: 479 PGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVF 538
GIKYVVD G K+K YN G+ES + ISK CYRLY++ +
Sbjct: 688 DGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNY 747
Query: 539 NNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALD 598
N L D + EI + + VVL +KS+ I + NF F PP AL+++ L AL AL+
Sbjct: 748 YNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALN 807
Query: 599 SNGRLTALGKAMAHYPMSPRHSRMLL 624
G LT G+ MA +P+ P S+M++
Sbjct: 808 QLGELTKAGRRMAEFPLDPMLSKMIV 833
Score = 57 (25.1 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 283 PNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEIL 342
P T +N+ + EA E +Q+T FS + D D D+N + S S+T +
Sbjct: 69 PRKTPGVNLYQQQEA-EAAMLLKKQKT--FSLLEADH-DEDENNVKKQSASKTGKSDKGQ 124
Query: 343 GEDEKLVEQKCPMDGDDPVDVLKEN 367
K EQ D DD V +++E+
Sbjct: 125 KRFRKKSEQL--EDDDDEVVIVRED 147
Score = 48 (22.0 bits), Expect = 9.9e-30, Sum P(3) = 9.9e-30
Identities = 20/116 (17%), Positives = 43/116 (37%)
Query: 253 LCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRF 312
L R ++++ + ++ G + E A + ++ E E +
Sbjct: 53 LSGDTRAFAEEIYARAPRKTPGVNLYQQQEAEAAMLLKKQKTFSLLEADHDEDENNVKKQ 112
Query: 313 SSYDEDQFDIDDNELDALSDS--ETESETEILGEDEKLVEQKCPMDGDDPVDVLKE 366
S+ + D S+ + + E I+ ED++ V +K D DD + +E
Sbjct: 113 SASKTGKSDKGQKRFRKKSEQLEDDDDEVVIVREDKRNVRRKVSEDEDDGTESEEE 168
Score = 38 (18.4 bits), Expect = 2.2e-65, Sum P(3) = 2.2e-65
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 734 EFCNEYALHLKTMEEMSKLRKQLLHLL 760
++C E + +++M+ +R QL LL
Sbjct: 901 QWCYENYIQVRSMKRARDIRDQLEGLL 927
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 389 (142.0 bits), Expect = 3.0e-65, Sum P(3) = 3.0e-65
Identities = 101/258 (39%), Positives = 147/258 (56%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
++ + R+ LPI ++QE++ + DNS VI+ GETG GKTTQ+ Q+L E G+
Sbjct: 59 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY----- 113
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
+ G IG TQPRRVA ++ AKRV+ E+G +LG+EVG+ +R + +S IK+MTDGIL
Sbjct: 114 -TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGIL 172
Query: 142 LRE-LKAL----Y------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE L+ Y E ++ L + G E R LKLI+ SAT+ E F
Sbjct: 173 LRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFA 232
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
S F N PI +P R FPV + FSK T DY+ A K+ + +H G IL+F+ G
Sbjct: 233 S---FFGNVPIFHIPGRTFPVDILFSK-TPQEDYVEAAVKQSLQVHLSGAPGDILIFMPG 288
Query: 247 QREVEYLCSKLRKASKQL 264
Q ++E ++ + ++L
Sbjct: 289 QEDIEVTSDQIVEHLEEL 306
Score = 322 (118.4 bits), Expect = 3.0e-65, Sum P(3) = 3.0e-65
Identities = 72/215 (33%), Positives = 117/215 (54%)
Query: 410 PTPEQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVST 469
P E S VE + + + A AL VLP+Y+ LP+ Q ++F+ +G R +V+T
Sbjct: 287 PGQEDIEVTSDQIVEHLEELENAP--ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT 344
Query: 470 NVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHC 529
N+AETSLT+ GI +V+D+G K+K +N G+++ +I IS+ C
Sbjct: 345 NIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQC 404
Query: 530 YRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAER 589
+RLY+ + + N L + EI + + VVLL+KS+ + + F F PP ++ +
Sbjct: 405 FRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMY 464
Query: 590 CLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
L L ALD+ G LT+ G+ M +P+ P S+ML+
Sbjct: 465 QLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI 499
Score = 73 (30.8 bits), Expect = 3.0e-65, Sum P(3) = 3.0e-65
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
KF+ P SD LT ++ + +CN++ +H K M ++ ++R QL ++ Q
Sbjct: 539 KFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQ 594
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 404 (147.3 bits), Expect = 3.3e-65, Sum P(3) = 3.3e-65
Identities = 100/253 (39%), Positives = 143/253 (56%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LP+ M +++EA+ DN V+I GETG GKTTQ+ Q+++E G N+ ++
Sbjct: 329 IQEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGM--NKVGGQTK 386
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-L 145
IG TQPRRVA + AKRV+ E+G LG VG+ +R + ++ IK+MTDG+L RE L
Sbjct: 387 LIGCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREAL 446
Query: 146 KALYEKQQQLLRSGQCIE---PKDRVF----------P-LKLILMSATLRVEDFISGGRL 191
+ ++ + E D +F P LK+I+ SATL F R
Sbjct: 447 NDPNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKF---SRY 503
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F N PII +P R FPV V ++K E+ DY+ A + V+ IH P G ILVF+TGQ E+E
Sbjct: 504 FNNCPIITIPGRTFPVEVLYTKAPEM-DYLAAALESVIQIHVSEPAGDILVFLTGQEEIE 562
Query: 252 YLCSKLRKASKQL 264
C L + K L
Sbjct: 563 TSCEALHERMKLL 575
Score = 340 (124.7 bits), Expect = 3.3e-65, Sum P(3) = 3.3e-65
Identities = 76/207 (36%), Positives = 117/207 (56%)
Query: 426 MGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVV 485
+G+N + L +LP+Y+ LP+ Q R+FE G R V+++TN+AETS+TI GI YVV
Sbjct: 575 LGEN----IPELIILPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYYVV 630
Query: 486 DTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNN-ILPD 544
D G K+ Y+S G++S + ISK CYRLY+ + ++P+
Sbjct: 631 DPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMIPN 690
Query: 545 FSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLT 604
+ EI + + +L++K+M I + NF F PP T ++ A L L+ALD +G LT
Sbjct: 691 -TIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPSTTTMLTALEDLYILDALDDDGNLT 749
Query: 605 ALGKAMAHYPMSPRHSRMLLTLIQTMK 631
LG+ MA PM P ++ TLIQ+++
Sbjct: 750 TLGRKMADLPMEPALAK---TLIQSVE 773
Score = 46 (21.3 bits), Expect = 3.3e-65, Sum P(3) = 3.3e-65
Identities = 11/54 (20%), Positives = 26/54 (48%)
Query: 707 AKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
++F + D LT+ Q + + +C + + ++M ++RKQL ++
Sbjct: 808 SRFHHSLGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERSMRRAMEVRKQLKSIM 861
Score = 40 (19.1 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 323 DDNELDALSDSETESE 338
D ELD D++TESE
Sbjct: 195 DYPELDQEEDTQTESE 210
Score = 38 (18.4 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 264 LLVNSSKENKGNQVVADSEPNATKDIN 290
LL N++K+N +V+ S AT D N
Sbjct: 475 LLKNAAKQNPNLKVIVTS---ATLDSN 498
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 384 (140.2 bits), Expect = 7.0e-65, Sum P(3) = 7.0e-65
Identities = 89/249 (35%), Positives = 144/249 (57%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
++ R+ LP+ + ++E ++ +N+N +I+ GETG GKTTQ+PQF+ +A R
Sbjct: 53 DILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRK 112
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+G TQPRRVA ++ ++RVA E+ + +G+EVG+ +R + +K++TDG+LLRE
Sbjct: 113 WLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREA 172
Query: 146 KA--LYEKQQQLL--RSGQCIEPKDRVF----------P-LKLILMSATLRVEDFISGGR 190
A L E+ + ++ + + D +F P LKL++MSATL E F
Sbjct: 173 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQD--- 229
Query: 191 LFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREV 250
F P+++VP R PV + +++ E DY+ A + V+ IH P G ILVF+TG+ E+
Sbjct: 230 YFSGAPLMKVPGRLHPVEIFYTQEPER-DYLEAAIRTVVQIHMCEPPGDILVFLTGEEEI 288
Query: 251 EYLCSKLRK 259
E C K+ K
Sbjct: 289 EDACRKINK 297
Score = 329 (120.9 bits), Expect = 7.0e-65, Sum P(3) = 7.0e-65
Identities = 82/219 (37%), Positives = 117/219 (53%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVF----EDVKEGE---RLV 465
+ C +++ +V +GD VG + V+PLY+ LP A Q ++F E V EG R +
Sbjct: 290 DACRKINK-EVGNLGDQ----VGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKI 344
Query: 466 VVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXX 525
VVSTN+AETSLTI GI YV+D G K K YN +ES + ISK
Sbjct: 345 VVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTR 404
Query: 526 XXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALV 585
C+RLY+ FNN L + EI + + VL +K + ID + +F F PP L+
Sbjct: 405 PGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLM 464
Query: 586 EAERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
A L L ALD +G LT G+ M+ +P+ P+ ++ML+
Sbjct: 465 RALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLI 503
Score = 66 (28.3 bits), Expect = 7.0e-65, Sum P(3) = 7.0e-65
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
R+ ++ A + A+F + D LT+ F+ + +C E ++ + M+ +R+Q
Sbjct: 531 REAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQ 590
Query: 756 LLHLL--FN 762
L+ ++ FN
Sbjct: 591 LVRIMSRFN 599
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 399 (145.5 bits), Expect = 9.2e-65, Sum P(3) = 9.2e-65
Identities = 103/276 (37%), Positives = 148/276 (53%)
Query: 5 LPSSLQRPLAAPIVVHVSRPN-EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGK 63
+P L+ A + R N + R+ LPI +++ +MEA+ DN +++ GETG GK
Sbjct: 510 MPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGK 569
Query: 64 TTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRH 123
TTQ+ Q+ EAG G R G+IG TQPRRVA ++ AKRVA E G LG +VG+ +R
Sbjct: 570 TTQMTQYAIEAGLG------RRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRF 623
Query: 124 DKKIGDSCSIKFMTDGILLRE-----------LKALYEKQQQLLRSGQC---IEPKDRVF 169
+ IK+MTDG+LLRE L L E ++ + + ++ R
Sbjct: 624 EDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
Query: 170 P-LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKV 228
P LKLI+ SATL D + F PI +P R FPV + +++ E DY+ A+ V
Sbjct: 684 PELKLIITSATL---DSVKFSEYFLEAPIFTIPGRTFPVEILYTREPES-DYLEAAHITV 739
Query: 229 MSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
M IH P G +LVF+TGQ E++ C L + K +
Sbjct: 740 MQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSM 775
Score = 327 (120.2 bits), Expect = 9.2e-65, Sum P(3) = 9.2e-65
Identities = 70/191 (36%), Positives = 106/191 (55%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y LP+ Q R+F+ G+R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 779 VPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQK 838
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YN +G++S + IS+ CYRLY+ F + + EI +
Sbjct: 839 IYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRT 898
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ +L +K+M I+ + +F F P + +++ A L L ALD +G LT LG+ MA +
Sbjct: 899 NLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEF 958
Query: 614 PMSPRHSRMLL 624
P+ P S++L+
Sbjct: 959 PLEPSLSKLLI 969
Score = 65 (27.9 bits), Expect = 9.2e-65, Sum P(3) = 9.2e-65
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
++ ++ A AKF P D LT+ ++ +C E + +++M+ +RKQ
Sbjct: 997 KEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQ 1056
Query: 756 LLHLL 760
LL ++
Sbjct: 1057 LLGIM 1061
Score = 54 (24.1 bits), Expect = 2.9e-36, Sum P(3) = 2.9e-36
Identities = 28/101 (27%), Positives = 44/101 (43%)
Query: 381 SGK-NASGPSSQMKLSTPAIPEQCTELPPTPTPE-QCPELSSP--DVEKMGDNKRAGVGA 436
SG+ +GP +L T E+ PTP PE Q L+S ++ MG N
Sbjct: 863 SGRAGRTGPGKCYRLYTERAFRD--EMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDF 920
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVV-VSTNVAETSL 476
+ PL +M+ A L + +G+ L+ + +AE L
Sbjct: 921 MDAPPLDSMITALNTLHTLSAL-DGDGLLTKLGRRMAEFPL 960
Score = 46 (21.3 bits), Expect = 3.2e-27, Sum P(4) = 3.2e-27
Identities = 21/89 (23%), Positives = 44/89 (49%)
Query: 212 SKRTEIVDYIGQAYK-KVMSIHKRLPQGGILVFVTGQREV-EYLC--SKLRKASKQLLVN 267
++++E+ + IG+ Y +V SI G + + G R+ E L S++R Q + +
Sbjct: 225 ARKSEVAE-IGKIYDGRVNSIQSF----GAFITLEGFRQKQEGLVHISQIRNERVQTVAD 279
Query: 268 SSKENKGNQVVADSEPNATKDINMKEINE 296
K + +V + N ++MKE+++
Sbjct: 280 VLKRGENVKVKVNKIENGKISLSMKEVDQ 308
Score = 41 (19.5 bits), Expect = 3.2e-27, Sum P(4) = 3.2e-27
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 360 PVDVLKENWSLGSLKLAFEVLSGKNASGPSSQM 392
P+ LK+N + V+ G+ SG ++QM
Sbjct: 541 PIFALKKNLMEAMIDNQILVVVGETGSGKTTQM 573
Score = 37 (18.1 bits), Expect = 2.6e-26, Sum P(4) = 2.6e-26
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 234 RLPQGGILVFVTGQRE--VEYLCSKLRKASK-QLLVNSSKENKGNQVVADSEPNATKDIN 290
R Q G LV ++ R V+ + L++ ++ VN + K + + + + N+ +D+N
Sbjct: 257 RQKQEG-LVHISQIRNERVQTVADVLKRGENVKVKVNKIENGKISLSMKEVDQNSGEDLN 315
Query: 291 MKE 293
+E
Sbjct: 316 PRE 318
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 399 (145.5 bits), Expect = 9.2e-65, Sum P(3) = 9.2e-65
Identities = 103/276 (37%), Positives = 148/276 (53%)
Query: 5 LPSSLQRPLAAPIVVHVSRPN-EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGK 63
+P L+ A + R N + R+ LPI +++ +MEA+ DN +++ GETG GK
Sbjct: 510 MPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGK 569
Query: 64 TTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRH 123
TTQ+ Q+ EAG G R G+IG TQPRRVA ++ AKRVA E G LG +VG+ +R
Sbjct: 570 TTQMTQYAIEAGLG------RRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRF 623
Query: 124 DKKIGDSCSIKFMTDGILLRE-----------LKALYEKQQQLLRSGQC---IEPKDRVF 169
+ IK+MTDG+LLRE L L E ++ + + ++ R
Sbjct: 624 EDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
Query: 170 P-LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKV 228
P LKLI+ SATL D + F PI +P R FPV + +++ E DY+ A+ V
Sbjct: 684 PELKLIITSATL---DSVKFSEYFLEAPIFTIPGRTFPVEILYTREPES-DYLEAAHITV 739
Query: 229 MSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
M IH P G +LVF+TGQ E++ C L + K +
Sbjct: 740 MQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSM 775
Score = 327 (120.2 bits), Expect = 9.2e-65, Sum P(3) = 9.2e-65
Identities = 70/191 (36%), Positives = 106/191 (55%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y LP+ Q R+F+ G+R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 779 VPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQK 838
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YN +G++S + IS+ CYRLY+ F + + EI +
Sbjct: 839 IYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRT 898
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ +L +K+M I+ + +F F P + +++ A L L ALD +G LT LG+ MA +
Sbjct: 899 NLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEF 958
Query: 614 PMSPRHSRMLL 624
P+ P S++L+
Sbjct: 959 PLEPSLSKLLI 969
Score = 65 (27.9 bits), Expect = 9.2e-65, Sum P(3) = 9.2e-65
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
++ ++ A AKF P D LT+ ++ +C E + +++M+ +RKQ
Sbjct: 997 KEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQ 1056
Query: 756 LLHLL 760
LL ++
Sbjct: 1057 LLGIM 1061
Score = 54 (24.1 bits), Expect = 2.9e-36, Sum P(3) = 2.9e-36
Identities = 28/101 (27%), Positives = 44/101 (43%)
Query: 381 SGK-NASGPSSQMKLSTPAIPEQCTELPPTPTPE-QCPELSSP--DVEKMGDNKRAGVGA 436
SG+ +GP +L T E+ PTP PE Q L+S ++ MG N
Sbjct: 863 SGRAGRTGPGKCYRLYTERAFRD--EMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDF 920
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVV-VSTNVAETSL 476
+ PL +M+ A L + +G+ L+ + +AE L
Sbjct: 921 MDAPPLDSMITALNTLHTLSAL-DGDGLLTKLGRRMAEFPL 960
Score = 46 (21.3 bits), Expect = 3.2e-27, Sum P(4) = 3.2e-27
Identities = 21/89 (23%), Positives = 44/89 (49%)
Query: 212 SKRTEIVDYIGQAYK-KVMSIHKRLPQGGILVFVTGQREV-EYLC--SKLRKASKQLLVN 267
++++E+ + IG+ Y +V SI G + + G R+ E L S++R Q + +
Sbjct: 225 ARKSEVAE-IGKIYDGRVNSIQSF----GAFITLEGFRQKQEGLVHISQIRNERVQTVAD 279
Query: 268 SSKENKGNQVVADSEPNATKDINMKEINE 296
K + +V + N ++MKE+++
Sbjct: 280 VLKRGENVKVKVNKIENGKISLSMKEVDQ 308
Score = 41 (19.5 bits), Expect = 3.2e-27, Sum P(4) = 3.2e-27
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 360 PVDVLKENWSLGSLKLAFEVLSGKNASGPSSQM 392
P+ LK+N + V+ G+ SG ++QM
Sbjct: 541 PIFALKKNLMEAMIDNQILVVVGETGSGKTTQM 573
Score = 37 (18.1 bits), Expect = 2.6e-26, Sum P(4) = 2.6e-26
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 234 RLPQGGILVFVTGQRE--VEYLCSKLRKASK-QLLVNSSKENKGNQVVADSEPNATKDIN 290
R Q G LV ++ R V+ + L++ ++ VN + K + + + + N+ +D+N
Sbjct: 257 RQKQEG-LVHISQIRNERVQTVADVLKRGENVKVKVNKIENGKISLSMKEVDQNSGEDLN 315
Query: 291 MKE 293
+E
Sbjct: 316 PRE 318
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 398 (145.2 bits), Expect = 1.1e-64, Sum P(3) = 1.1e-64
Identities = 103/249 (41%), Positives = 141/249 (56%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI + ++++AV DN +I+ GETG GKTTQ+ Q+L E GF ++R G+IG
Sbjct: 583 RQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGF-----TAR-GKIGC 636
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKALYE 150
TQPRRVA ++ AKRVA E G LG+EVG+ +R + IK+MTDG+LLRE E
Sbjct: 637 TQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAE 696
Query: 151 -KQQQLLRSGQCIEPK---DRVF----------P-LKLILMSATLRVEDFISGGRLFRNP 195
K ++ + E D +F P LKLI+ SATL D + + F
Sbjct: 697 LKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATL---DAVKFSQYFFKA 753
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R FPV V ++K E DY+ + VM IH R P G IL+F+TGQ E++ C
Sbjct: 754 PIFTIPGRTFPVEVLYTKEPE-TDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACE 812
Query: 256 KLRKASKQL 264
L + K L
Sbjct: 813 ILYERMKSL 821
Score = 326 (119.8 bits), Expect = 1.1e-64, Sum P(3) = 1.1e-64
Identities = 74/191 (38%), Positives = 105/191 (54%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 825 VPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQK 884
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS G++S + IS+ YRLY+ + + + EI +
Sbjct: 885 VYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRT 944
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P V +LV A L +L ALD G LT LG+ MA +
Sbjct: 945 NLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEF 1004
Query: 614 PMSPRHSRMLL 624
P+ P S+ML+
Sbjct: 1005 PLEPNLSKMLI 1015
Score = 67 (28.6 bits), Expect = 1.1e-64, Sum P(3) = 1.1e-64
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 701 VAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+A AKF+ D LT+ ++ +K +C E + ++T++ +RKQLL ++
Sbjct: 1048 LADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIM 1107
Score = 59 (25.8 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 34/143 (23%), Positives = 54/143 (37%)
Query: 273 KGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSD 332
+GN + D E + K + E +EI+ + DR D FD + L D
Sbjct: 398 QGNGMEGD-EHESRKRVTRISSPERWEIKQMISSGVLDRSEMPD---FDEETGLLPKDED 453
Query: 333 SETESETEILGEDEKLVEQKCPMDGD-DPVDVLKE-NWSLGSLKLAFEVLSGKNASGPSS 390
E + E EI+ E+ + D PV ++K + SL + LS +
Sbjct: 454 DEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKML 513
Query: 391 QMKLSTPAIPEQCTELPPTPTPE 413
Q + A+P + P PE
Sbjct: 514 QREQEIEAMPTSLNKNWIDPLPE 536
Score = 49 (22.3 bits), Expect = 9.2e-36, Sum P(3) = 9.2e-36
Identities = 23/94 (24%), Positives = 39/94 (41%)
Query: 386 SGPSSQMKLSTPAIPEQCTELPPTPTPE-QCPELSSP--DVEKMGDNKRAGVGALCVLPL 442
+GP +L T E+ PTP PE Q L++ ++ MG N + P+
Sbjct: 915 TGPGKTYRLYTERAYRD--EMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPV 972
Query: 443 YAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSL 476
+++ A QL + + L + +AE L
Sbjct: 973 ESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPL 1006
Score = 47 (21.6 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 260 ASKQLLVNSSKENKGNQVVAD----SEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSY 315
AS++ V KE+K +Q++ + PN T + KE ++ E E+ ++
Sbjct: 82 ASQEKTVGDKKEDKKSQLLKMFPGLALPNDT--YSKKEESDDDEKVKAKPEKHSETHKKT 139
Query: 316 DEDQFDIDDNELDALSDSE 334
D D EL+AL+ E
Sbjct: 140 DMSDVDAAMMELEALAPGE 158
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 382 (139.5 bits), Expect = 2.6e-64, Sum P(3) = 2.6e-64
Identities = 93/258 (36%), Positives = 139/258 (53%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
+R R+ LP + ++++ + DN +I+ GETG GKTTQ+ QFL+E G+
Sbjct: 480 ARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGY----- 534
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
R+G IG TQPRRVA ++ AKRV+ E+G+ LG VG+ +R + G IK+MTDG+L
Sbjct: 535 -HRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVL 593
Query: 142 LRE--LKALYEKQQQLL------RS-------GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE ++ EK ++ RS G + R +KL++ SAT+ + F
Sbjct: 594 LRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFS 653
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
F P +P R +PV + F+K DY+ A ++V+ IH P G ILVF+TG
Sbjct: 654 D---FFGGAPQFTIPGRTYPVDIMFAK-APCSDYVEAAVRQVLQIHLSQPAGDILVFMTG 709
Query: 247 QREVEYLCSKLRKASKQL 264
Q ++E C + QL
Sbjct: 710 QEDIEATCEIIADRLNQL 727
Score = 329 (120.9 bits), Expect = 2.6e-64, Sum P(3) = 2.6e-64
Identities = 70/189 (37%), Positives = 111/189 (58%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP+Y+ +PA Q ++F+ + G R VVV+TN+AETSLT+ GI YVVDTG K+K YN
Sbjct: 733 LSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYN 792
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
S GI++ ++ IS+ YRLY+ + + + + EI + +
Sbjct: 793 SKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLS 852
Query: 557 GVVLLMKSMNIDKVSNFPF-PTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL++KS+ ++++S+F F PP T + L L ALD+ G+LT LGK M+ +PM
Sbjct: 853 NTVLILKSLGVEEISDFDFMDRPPNDTLMASLYE-LWTLGALDNFGKLTTLGKKMSLFPM 911
Query: 616 SPRHSRMLL 624
P S++++
Sbjct: 912 DPSLSKLII 920
Score = 77 (32.2 bits), Expect = 2.6e-64, Sum P(3) = 2.6e-64
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 699 KEVAKLSHA---KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
KE A+ S A KF+ P SD L + Q ++ + +C+++ LH KT++ +R+Q
Sbjct: 948 KERAEESDAAREKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQ 1007
Query: 756 LLHLLFNQ 763
L+ ++ Q
Sbjct: 1008 LVEIMSKQ 1015
Score = 39 (18.8 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 575 FPTPPEVTALVEAERCLKALEALDSN 600
F + P++ A + A+R L A + L N
Sbjct: 1125 FSSKPQLDAQIAADRELDAKQKLAKN 1150
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 387 (141.3 bits), Expect = 4.6e-64, Sum P(3) = 4.6e-64
Identities = 97/253 (38%), Positives = 140/253 (55%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
SR + R+ LP+ QE++ + +NS +II GETG GKTTQ+ Q+L E G+
Sbjct: 522 SRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGY----- 576
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
S+ G IG TQPRRVA ++ AKRV+ E+ LG++VG+ +R + + IK+MTDGIL
Sbjct: 577 -SKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGIL 635
Query: 142 LRE-LK--------ALY--EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE L+ A+ E ++ L + G E R LKLI+ SAT+ F
Sbjct: 636 LRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFA 695
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
+ F N P +P R FPV V FSK T DY+ A K+ + +H +G +L+F+ G
Sbjct: 696 T---FFGNVPTFTIPGRTFPVDVMFSKNT-CEDYVESAVKQALQVHLTPNEGDMLIFMPG 751
Query: 247 QREVEYLCSKLRK 259
Q ++E C L +
Sbjct: 752 QEDIEVTCEVLEE 764
Score = 304 (112.1 bits), Expect = 4.6e-64, Sum P(3) = 4.6e-64
Identities = 67/189 (35%), Positives = 104/189 (55%)
Query: 436 ALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKY 495
AL +LP+Y+ LP+ Q ++F+ +G R VV+TN+AETSLT+ GI YV+D+G K+K Y
Sbjct: 774 ALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVY 833
Query: 496 NSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPV 555
N G+++ +I IS+ YRLY+ + + L + EI + +
Sbjct: 834 NPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNL 893
Query: 556 DGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VLL+KS+ + + F F PP ++ + L L ALD G LT LG+ MA +P+
Sbjct: 894 ANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPL 953
Query: 616 SPRHSRMLL 624
P +ML+
Sbjct: 954 DPPQCQMLI 962
Score = 95 (38.5 bits), Expect = 4.6e-64, Sum P(3) = 4.6e-64
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQN 764
KF P SD LT Q + + +CNE+ +H+K M ++ ++R+QL ++ QN
Sbjct: 1002 KFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQN 1058
Score = 37 (18.1 bits), Expect = 5.4e-58, Sum P(3) = 5.4e-58
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 727 ELSKSPVEFCNEYALHLKTMEE-MSKLRKQL 756
E +S E + A HLK MEE M K + ++
Sbjct: 1155 ESGRSGREKKKQAAEHLKEMEEQMLKAQHEM 1185
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 396 (144.5 bits), Expect = 5.9e-64, Sum P(3) = 5.9e-64
Identities = 96/258 (37%), Positives = 143/258 (55%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
S+ + R+ LP + ++++ + DN V++ GETG GKTTQ+ QFL+E G+
Sbjct: 176 SKSKTLREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGY----- 230
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
++ G IG TQPRRVA ++ AKRV+ E+ + LG VG+ +R + G + +IK+MTDG+L
Sbjct: 231 -AKFGMIGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVL 289
Query: 142 LRELKA-----------LYEKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFI 186
LRE + E ++ L + + ++ LKLI+ SAT+ E F
Sbjct: 290 LRESLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERF- 348
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
R F P +P R FPV VHFS RT DY+ A K+V++IH G ILVF+TG
Sbjct: 349 --SRFFGGAPEFIIPGRTFPVDVHFS-RTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTG 405
Query: 247 QREVEYLCSKLRKASKQL 264
Q ++E C + + K L
Sbjct: 406 QEDIEATCELVDERLKLL 423
Score = 309 (113.8 bits), Expect = 5.9e-64, Sum P(3) = 5.9e-64
Identities = 66/189 (34%), Positives = 106/189 (56%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP+Y+ +PA Q ++FE G R V+V+TN+AETSLT+ GI +VVD+G K+K YN
Sbjct: 429 LSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYN 488
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+++ +I IS+ YRLY+ + N + + EI + +
Sbjct: 489 PKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLS 548
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VLL+KS+ + + +F F PP + + L +L ALD+ G LT LG+ M +PM
Sbjct: 549 NTVLLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSLGALDNLGDLTHLGRQMTPFPMD 608
Query: 617 PRHSRMLLT 625
P +++++T
Sbjct: 609 PPLAKLIIT 617
Score = 72 (30.4 bits), Expect = 5.9e-64, Sum P(3) = 5.9e-64
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
++ +E + + KF P SD LT+ + ++ + +C ++ LH KT+ ++R Q
Sbjct: 645 KERQEESDAAREKFFVPESDHLTLLHVYTQWKSNGYSDHWCTKHFLHAKTLRRAKEVRDQ 704
Query: 756 LLHLLFNQ 763
L ++ Q
Sbjct: 705 LNDIMVMQ 712
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 374 (136.7 bits), Expect = 9.4e-64, Sum P(3) = 9.4e-64
Identities = 101/253 (39%), Positives = 137/253 (54%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+ R+ LP+ M E+++AV DN ++I GETG GKTTQ+ Q+L E GF S G
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGF------SNYG 529
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-- 144
IG TQPRRVA ++ AKRVA E+G +G +VG+ +R + G IK+MTDG+L RE
Sbjct: 530 MIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREAL 589
Query: 145 LKALYEKQQQLL--RSGQCIEPKDRVF----------P-LKLILMSATLRVEDFISGGRL 191
L K ++ + + D +F P LK+I+ SATL F
Sbjct: 590 LDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKF---SEY 646
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F N PII +P + FPV V +S+ T +DYI A V+ IH G ILVF+TGQ E++
Sbjct: 647 FLNCPIINIPGKTFPVEVLYSQ-TPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEID 705
Query: 252 YLCSKLRKASKQL 264
C L K L
Sbjct: 706 SCCEILYDRVKTL 718
Score = 354 (129.7 bits), Expect = 9.4e-64, Sum P(3) = 9.4e-64
Identities = 78/215 (36%), Positives = 120/215 (55%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVA 472
+ C E+ V+ +GD+ +G L +LP+Y+ LP+ Q ++FE +G R VV +TN+A
Sbjct: 705 DSCCEILYDRVKTLGDS----IGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIA 760
Query: 473 ETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRL 532
ETS+TI GI YVVD G K+ YN+ GIE + IS+ CYRL
Sbjct: 761 ETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRL 820
Query: 533 YSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLK 592
Y+ + F N + + + EI + + +L++K+M I+ + F F PP ++ A L
Sbjct: 821 YTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELY 880
Query: 593 ALEALDSNGRLTALGKAMAHYPMSPRHSRMLLTLI 627
L++LD G+LT LGK M+ +PM P SR LL+ +
Sbjct: 881 HLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSV 915
Score = 55 (24.4 bits), Expect = 9.4e-64, Sum P(3) = 9.4e-64
Identities = 15/68 (22%), Positives = 34/68 (50%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
R+L+ +K AKF +P D LT+ ++ + ++C LH + ++ ++ Q
Sbjct: 942 RQLEADSK--KAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQ 999
Query: 756 LLHLLFNQ 763
+ ++F +
Sbjct: 1000 I-SMIFKK 1006
Score = 48 (22.0 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 32/160 (20%), Positives = 69/160 (43%)
Query: 277 VVADSEPNATKDINMKEINEAFEIQGYSTE-QQTDRFSSYDEDQFDIDDNELDALSDSET 335
+V +P + + + IN++ +Q + Q+ D SY ED + + L + +
Sbjct: 11 IVGSDDPVIIEFV-LNIINKSGNLQEFIRNIQKLDAGISY-EDSIKMYNAFLGKQEEEKV 68
Query: 336 ESETEILGEDEKLVEQ-KCPMDGDDPV------DVLKENWSLGSLKLAFEVL-SG-KNAS 386
++ + +K+ + K ++ DDPV +L ++ S+ + ++ SG N +
Sbjct: 69 RNKVKSSPLSQKINQVLKDDVNLDDPVVTEFVLSILNKSKSITEFQEQLNLMQSGLDNET 128
Query: 387 GPSSQMKLSTPAIPEQCTELPPTPTPEQCPELSSPDVEKM 426
S P + E+ + LP T P + +V+K+
Sbjct: 129 IFKIYQIASPPVMKEEVSVLPSTKIPAKIEAKIEEEVQKI 168
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 391 (142.7 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 97/249 (38%), Positives = 144/249 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ ++R G+IG
Sbjct: 552 RESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-----TTR-GKIGC 605
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 606 TQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 665
Query: 145 -----LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 666 LGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATL---DAVKFSQYFYEA 722
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R +PV V ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 723 PIFTIPGRTYPVEVLYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 781
Query: 256 KLRKASKQL 264
L + K L
Sbjct: 782 ILYERMKSL 790
Score = 326 (119.8 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 72/191 (37%), Positives = 103/191 (53%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 794 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 853
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+ CYRLY+ + + + + EI +
Sbjct: 854 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 913
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 914 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 973
Query: 614 PMSPRHSRMLL 624
P+ P +ML+
Sbjct: 974 PLEPMLCKMLI 984
Score = 65 (27.9 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 701 VAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+A AKF P D LT+ ++ +K +C E + +++ +RKQ+L ++
Sbjct: 1017 LADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIM 1076
Score = 40 (19.1 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 88 IGVTQPRRVAVLATAKRVAFELGLHLG 114
IG + +++ L+ +V EL HLG
Sbjct: 4 IGEDELKKLEYLSLVSKVCTELDNHLG 30
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 389 (142.0 bits), Expect = 1.9e-63, Sum P(3) = 1.9e-63
Identities = 101/258 (39%), Positives = 147/258 (56%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
++ + R+ LPI ++QE++ + DNS VI+ GETG GKTTQ+ Q+L E G+
Sbjct: 520 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY----- 574
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
+ G IG TQPRRVA ++ AKRV+ E+G +LG+EVG+ +R + +S IK+MTDGIL
Sbjct: 575 -TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGIL 633
Query: 142 LRE-LKAL----Y------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE L+ Y E ++ L + G E R LKLI+ SAT+ E F
Sbjct: 634 LRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFA 693
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
S F N PI +P R FPV + FSK T DY+ A K+ + +H G IL+F+ G
Sbjct: 694 S---FFGNVPIFHIPGRTFPVDILFSK-TPQEDYVEAAVKQSLQVHLSGAPGDILIFMPG 749
Query: 247 QREVEYLCSKLRKASKQL 264
Q ++E ++ + ++L
Sbjct: 750 QEDIEVTSDQIVEHLEEL 767
Score = 322 (118.4 bits), Expect = 1.9e-63, Sum P(3) = 1.9e-63
Identities = 72/215 (33%), Positives = 117/215 (54%)
Query: 410 PTPEQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVST 469
P E S VE + + + A AL VLP+Y+ LP+ Q ++F+ +G R +V+T
Sbjct: 748 PGQEDIEVTSDQIVEHLEELENAP--ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT 805
Query: 470 NVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHC 529
N+AETSLT+ GI +V+D+G K+K +N G+++ +I IS+ C
Sbjct: 806 NIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQC 865
Query: 530 YRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAER 589
+RLY+ + + N L + EI + + VVLL+KS+ + + F F PP ++ +
Sbjct: 866 FRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMY 925
Query: 590 CLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
L L ALD+ G LT+ G+ M +P+ P S+ML+
Sbjct: 926 QLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI 960
Score = 69 (29.3 bits), Expect = 1.9e-63, Sum P(3) = 1.9e-63
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
KF+ P SD L+ ++ + +CN++ +H K M ++ ++R QL ++ Q
Sbjct: 1000 KFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQ 1055
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 417 (151.9 bits), Expect = 2.5e-63, Sum P(2) = 2.5e-63
Identities = 105/278 (37%), Positives = 156/278 (56%)
Query: 2 TGNLPSSLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGC 61
T L + QR L + + +E+ RK LPI +I++AV+D+ +II GETG
Sbjct: 449 TRKLMTQEQRMLQEKLDQAEQKAQTIEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGS 508
Query: 62 GKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQV 121
GKTTQ+PQ+L EAG+ N ++G TQPRRVA ++ A RVA E+G+ LG EVG+ +
Sbjct: 509 GKTTQLPQYLHEAGYTKNGM-----KVGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSI 563
Query: 122 RHDKKIGDSCSIKFMTDGILLREL---------KALY--EKQQQLLRSG-QCIEPKD--R 167
R + D +K+MTDG+LLREL AL E ++ + + C KD +
Sbjct: 564 RFEDNTSDKTVLKYMTDGMLLRELLTEPDLGQYSALMIDEAHERTVPTDIACGLLKDIAK 623
Query: 168 VFP-LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYK 226
P LKL++ SAT+ + F S F N PI +P R + V +H++++ E +Y+ A
Sbjct: 624 ARPDLKLLISSATMDAQKFQS---YFDNAPIFNIPGRMYNVDIHYTQQPE-ANYLAAAIT 679
Query: 227 KVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
V IH G ILVF+TGQ E+E L++ +++L
Sbjct: 680 TVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQETARKL 717
Score = 312 (114.9 bits), Expect = 2.5e-63, Sum P(2) = 2.5e-63
Identities = 69/200 (34%), Positives = 107/200 (53%)
Query: 425 KMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYV 484
K+G NK + + + P+YA LP+ Q ++FE R VV++TN+AETSLTI GI YV
Sbjct: 716 KLG-NK---IPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYV 771
Query: 485 VDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPD 544
+D G K +N G+ES + S+ C+RLY+ + N L +
Sbjct: 772 IDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEE 831
Query: 545 FSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLT 604
+ EI + + V+L++KS+ ID++ F F PP ++ A L AL AL+ G LT
Sbjct: 832 STTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRALEQLYALGALNDRGELT 891
Query: 605 ALGKAMAHYPMSPRHSRMLL 624
+G+ MA +P P ++ +L
Sbjct: 892 KIGRQMAEFPTDPMLAKAIL 911
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 372 (136.0 bits), Expect = 3.3e-63, Sum P(3) = 3.3e-63
Identities = 95/236 (40%), Positives = 135/236 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI + Q+++ + DN+ VI+ GETG GKTTQ+ Q+L E G+ S G +G
Sbjct: 560 RQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTSY------GMVGC 613
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-LKA-- 147
TQPRRVA ++ AKRV+ E+ +LG+EVG+ +R + + IK+MTDGILLRE L+
Sbjct: 614 TQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLRESLRESD 673
Query: 148 --------LYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ E ++ L + G E R LKLI+ SAT+ + F S F N
Sbjct: 674 LDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFAS---FFGNV 730
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
PI +P R FPV + FSK T DY+ A K+ + IH G IL+F+ GQ ++E
Sbjct: 731 PIFHIPGRTFPVDILFSK-TPQEDYVEAAVKQALQIHLSGMVGDILIFMPGQEDIE 785
Score = 332 (121.9 bits), Expect = 3.3e-63, Sum P(3) = 3.3e-63
Identities = 74/215 (34%), Positives = 117/215 (54%)
Query: 410 PTPEQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVST 469
P E S VE++ D + A AL VLP+Y+ LP+ Q ++F+ +G R +V+T
Sbjct: 779 PGQEDIEVTSDQIVERLADLENAP--ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT 836
Query: 470 NVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHC 529
N+AETSLT+ GI +VVD+G K+K +N G+++ ++ IS+ C
Sbjct: 837 NIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQC 896
Query: 530 YRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAER 589
YRLY+ + F N + + EI + + VVLL+KS+ + + F F PP ++ +
Sbjct: 897 YRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMY 956
Query: 590 CLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
L L ALD+ G LT G+ M +P+ P S+ML+
Sbjct: 957 QLWILGALDNTGALTPTGRLMVEFPLDPALSKMLI 991
Score = 76 (31.8 bits), Expect = 3.3e-63, Sum P(3) = 3.3e-63
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 708 KFSNPTSDVLTVAYA-LQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
KFS P SD LT LQ + S + +CN++ +H K M ++ ++R QL ++ Q
Sbjct: 1031 KFSVPESDHLTYLNVYLQWKNNNYSSI-WCNDHFIHTKAMRKVREVRAQLKDIMVQQ 1086
Score = 52 (23.4 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 364 LKENWSLGS--LKLAFEVLSGKNASGPSSQMKLSTPAIPEQCTELPPTPTP 412
++E SL ++ E KN G +K+ TP E+ T + P TP
Sbjct: 1203 MEEEMSLAQEQIRARKEEQDRKNNLGSVRAVKICTPGRKEEMTPMTPKRTP 1253
Score = 39 (18.8 bits), Expect = 3.8e-28, Sum P(3) = 3.8e-28
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 306 EQQTDRFSSYDEDQFDIDDNELDALSDSETESETEILGED--EKLVEQKCPMDGDD 359
++Q DR ++ +D N L + SD + +IL + +++ QK ++ D+
Sbjct: 348 QRQADRDWYMMDEGYDEFHNPLTSSSDEYVKKREQILQKQTQKRISAQKRQINEDN 403
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 393 (143.4 bits), Expect = 3.5e-63, Sum P(3) = 3.5e-63
Identities = 97/249 (38%), Positives = 144/249 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ +SR G+IG
Sbjct: 510 RESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-----TSR-GKIGC 563
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 564 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 623
Query: 145 -----LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 624 LTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYEA 680
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R +PV + ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 681 PIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 739
Query: 256 KLRKASKQL 264
L + K L
Sbjct: 740 ILYERMKSL 748
Score = 326 (119.8 bits), Expect = 3.5e-63, Sum P(3) = 3.5e-63
Identities = 72/191 (37%), Positives = 103/191 (53%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 752 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 811
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+ CYRLY+ + + + + EI +
Sbjct: 812 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 871
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 872 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 931
Query: 614 PMSPRHSRMLL 624
P+ P +ML+
Sbjct: 932 PLEPMLCKMLI 942
Score = 57 (25.1 bits), Expect = 3.5e-63, Sum P(3) = 3.5e-63
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 701 VAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+A AKF D LT+ ++ +K +C E + +++ +RKQ+L ++
Sbjct: 975 LADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIM 1034
Score = 43 (20.2 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 386 SGPSSQMKLSTPAIPEQCTELPPTPTPEQC-PELSSPDVEKMGDNKRAGVGALCVLPLYA 444
S PS+ ++ T P+ E P C P+ +P+V M D V A + L A
Sbjct: 89 SKPSTSKEVVTK--PKSEKERLKELFPALCRPD--NPNVRNMLDEDDVKVAADALKELEA 144
Query: 445 MLPAA 449
++P+A
Sbjct: 145 LMPSA 149
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 383 (139.9 bits), Expect = 3.5e-63, Sum P(3) = 3.5e-63
Identities = 99/258 (38%), Positives = 147/258 (56%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
++ + R+ LPI ++QE++ + DNS VI+ GETG GKTTQ+ Q+L E G+
Sbjct: 519 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY----- 573
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
+ G IG TQPRRVA ++ AKRV+ E+G +LG+EVG+ +R + ++ IK+MTDGIL
Sbjct: 574 -TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGIL 632
Query: 142 LRE-LKAL----Y------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE L+ Y E ++ L + G E R LKLI+ SAT+ E F
Sbjct: 633 LRESLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFA 692
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
+ F N PI +P R FPV + FSK T DY+ A K+ + +H G IL+F+ G
Sbjct: 693 A---FFGNVPIFHIPGRTFPVDILFSK-TPQEDYVEAAVKQSLQVHLSGAPGDILIFMPG 748
Query: 247 QREVEYLCSKLRKASKQL 264
Q ++E ++ + ++L
Sbjct: 749 QEDIEVTSDQIVEHLEEL 766
Score = 322 (118.4 bits), Expect = 3.5e-63, Sum P(3) = 3.5e-63
Identities = 72/215 (33%), Positives = 117/215 (54%)
Query: 410 PTPEQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVST 469
P E S VE + + + A AL VLP+Y+ LP+ Q ++F+ +G R +V+T
Sbjct: 747 PGQEDIEVTSDQIVEHLEELENAP--ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT 804
Query: 470 NVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHC 529
N+AETSLT+ GI +V+D+G K+K +N G+++ +I IS+ C
Sbjct: 805 NIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQC 864
Query: 530 YRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAER 589
+RLY+ + + N L + EI + + VVLL+KS+ + + F F PP ++ +
Sbjct: 865 FRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMY 924
Query: 590 CLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
L L ALD+ G LT+ G+ M +P+ P S+ML+
Sbjct: 925 QLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI 959
Score = 73 (30.8 bits), Expect = 3.5e-63, Sum P(3) = 3.5e-63
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
KF+ P SD LT ++ + +CN++ +H K M ++ ++R QL ++ Q
Sbjct: 999 KFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQ 1054
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 383 (139.9 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 99/258 (38%), Positives = 147/258 (56%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
++ + R+ LPI ++QE++ + DNS VI+ GETG GKTTQ+ Q+L E G+
Sbjct: 520 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY----- 574
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
+ G IG TQPRRVA ++ AKRV+ E+G +LG+EVG+ +R + ++ IK+MTDGIL
Sbjct: 575 -TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGIL 633
Query: 142 LRE-LKAL----Y------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE L+ Y E ++ L + G E R LKLI+ SAT+ E F
Sbjct: 634 LRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFA 693
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
+ F N PI +P R FPV + FSK T DY+ A K+ + +H G IL+F+ G
Sbjct: 694 A---FFGNVPIFHIPGRTFPVDILFSK-TPQEDYVEAAVKQSLQVHLSGAPGDILIFMPG 749
Query: 247 QREVEYLCSKLRKASKQL 264
Q ++E ++ + ++L
Sbjct: 750 QEDIEVTSDQIVEHLEEL 767
Score = 322 (118.4 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 72/215 (33%), Positives = 117/215 (54%)
Query: 410 PTPEQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVST 469
P E S VE + + + A AL VLP+Y+ LP+ Q ++F+ +G R +V+T
Sbjct: 748 PGQEDIEVTSDQIVEHLEELENAP--ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT 805
Query: 470 NVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHC 529
N+AETSLT+ GI +V+D+G K+K +N G+++ +I IS+ C
Sbjct: 806 NIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQC 865
Query: 530 YRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAER 589
+RLY+ + + N L + EI + + VVLL+KS+ + + F F PP ++ +
Sbjct: 866 FRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMY 925
Query: 590 CLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
L L ALD+ G LT+ G+ M +P+ P S+ML+
Sbjct: 926 QLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI 960
Score = 73 (30.8 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
KF+ P SD LT ++ + +CN++ +H K M ++ ++R QL ++ Q
Sbjct: 1000 KFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQ 1055
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 392 (143.0 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 99/259 (38%), Positives = 147/259 (56%)
Query: 25 NEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSR 84
N+ + RK LP+ +E ++ +N+N +I+ GETG GKTTQ+PQ+L EAG+ N
Sbjct: 220 NKYDEVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRN----- 274
Query: 85 SGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS-IKFMTDGILLR 143
+ I TQPRRVA + A RVA E+ + LG++VG+ +R D D + IK++TDG+LLR
Sbjct: 275 NQVIACTQPRRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLR 334
Query: 144 EL---------KALY--EKQQQLLRSGQCIEP-KD-----RVFPLKLILMSATLRVEDFI 186
E A+ E ++ L + + KD R LK+I+ SAT+ E F
Sbjct: 335 EFLQDPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKF- 393
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLP-QGGILVFVT 245
+ F N PI+ +P R+FPV +H++K+ E +YI A + IH P G ILVF+T
Sbjct: 394 --SQFFNNAPILNIPGRRFPVKIHYTKQPE-ANYIQAAITTIFQIHMTQPLPGDILVFLT 450
Query: 246 GQREVEYLCSKLRKASKQL 264
GQ E+E + LR + +L
Sbjct: 451 GQDEIETMEEILRDSILKL 469
Score = 311 (114.5 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 70/213 (32%), Positives = 110/213 (51%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVA 472
E E+ + K+GD + + V +YA LP Q ++F+ R +V++TN+A
Sbjct: 456 ETMEEILRDSILKLGDQ----IDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIA 511
Query: 473 ETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRL 532
ETS+TI GI YV+D G K YN G+ES + S+ C+RL
Sbjct: 512 ETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRL 571
Query: 533 YSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLK 592
++ F N L EI +V + V+LL+ S+ I+ + F F PP A+++A L
Sbjct: 572 FTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKALNLLY 631
Query: 593 ALEALDSNGRLTALGKAMAHYPMSPRHSRMLLT 625
AL AL++ G+LT GK M+ +P+ P ++ +LT
Sbjct: 632 ALGALNTQGKLTKTGKKMSEFPLDPVFTKCILT 664
Score = 65 (27.9 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
KE+A +F++ D + Q + S V++C +Y + KTM+ + + +QL+
Sbjct: 695 KELADKRKQEFNDLQGDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIYEQLIR 754
Query: 759 L 759
L
Sbjct: 755 L 755
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 403 (146.9 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 104/254 (40%), Positives = 143/254 (56%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+E RK LP+ +EAV ++ +II GETG GKTTQ+PQ+L+EAGF C
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGF----CEGGK- 411
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
RIG TQPRRVA ++ A RVA E+G LG +VG+ +R + + +K+MTDG+LLRE
Sbjct: 412 RIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFL 471
Query: 147 -----ALY------EKQQQLLRSGQCIE-PKDRV-F--PLKLILMSATLRVEDFISGGRL 191
A Y E ++ L + KD F LKL++ SATL E F S
Sbjct: 472 NEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSS---F 528
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLP-QGGILVFVTGQREV 250
F + PI +P R+FPV +++++ E DY+ A +M IH P G ILVF+TGQ E+
Sbjct: 529 FDDAPIFRIPGRRFPVDIYYTQAPE-ADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEI 587
Query: 251 EYLCSKLRKASKQL 264
E + L + SK L
Sbjct: 588 ETVQEALMERSKAL 601
Score = 316 (116.3 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 73/210 (34%), Positives = 112/210 (53%)
Query: 417 ELSSPDVEKMGDNKRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAET 474
E+ + M +K G + L LP+YA LP+ Q ++FE + R VV++TN+AET
Sbjct: 586 EIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAET 645
Query: 475 SLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYS 534
S+TI GI YV+D G K +++ +G+E + ISK C+RLY+
Sbjct: 646 SVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYT 705
Query: 535 SAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKAL 594
+ + + L + EI + + VVL++KS+ I + +F F PP LV A L AL
Sbjct: 706 AWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYAL 765
Query: 595 EALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
AL+ G LT LG+ MA +P P S+M++
Sbjct: 766 GALNHRGELTKLGRRMAEFPCDPCMSKMII 795
Score = 52 (23.4 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 709 FSNPTSDVLTVAYALQCFELSKSPVEFCNE-YALHLKTMEEMSKLRKQLLHLL 760
F +P D +T+ ++ S +C E Y H +TM+ +R QL+ LL
Sbjct: 837 FWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQH-RTMKRARDVRDQLVGLL 888
Score = 38 (18.4 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 14/68 (20%), Positives = 29/68 (42%)
Query: 298 FEIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEILGEDEKLVEQKCPMDG 357
+ + ST+Q ++ DE+ F + + S + +D K EQ+ +
Sbjct: 267 YHLPDASTKQIPSQYVEDDEEDFRPGGDGAKWEEEQLMASMLHLGAKDAKRKEQEFELLL 326
Query: 358 DDPVDVLK 365
D+ VD ++
Sbjct: 327 DEKVDFIQ 334
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 403 (146.9 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 104/254 (40%), Positives = 143/254 (56%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+E RK LP+ +EAV ++ +II GETG GKTTQ+PQ+L+EAGF C
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGF----CEGGK- 411
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
RIG TQPRRVA ++ A RVA E+G LG +VG+ +R + + +K+MTDG+LLRE
Sbjct: 412 RIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFL 471
Query: 147 -----ALY------EKQQQLLRSGQCIE-PKDRV-F--PLKLILMSATLRVEDFISGGRL 191
A Y E ++ L + KD F LKL++ SATL E F S
Sbjct: 472 NEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSS---F 528
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLP-QGGILVFVTGQREV 250
F + PI +P R+FPV +++++ E DY+ A +M IH P G ILVF+TGQ E+
Sbjct: 529 FDDAPIFRIPGRRFPVDIYYTQAPE-ADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEI 587
Query: 251 EYLCSKLRKASKQL 264
E + L + SK L
Sbjct: 588 ETVQEALMERSKAL 601
Score = 316 (116.3 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 73/210 (34%), Positives = 112/210 (53%)
Query: 417 ELSSPDVEKMGDNKRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAET 474
E+ + M +K G + L LP+YA LP+ Q ++FE + R VV++TN+AET
Sbjct: 586 EIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAET 645
Query: 475 SLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYS 534
S+TI GI YV+D G K +++ +G+E + ISK C+RLY+
Sbjct: 646 SVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYT 705
Query: 535 SAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKAL 594
+ + + L + EI + + VVL++KS+ I + +F F PP LV A L AL
Sbjct: 706 AWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYAL 765
Query: 595 EALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
AL+ G LT LG+ MA +P P S+M++
Sbjct: 766 GALNHRGELTKLGRRMAEFPCDPCMSKMII 795
Score = 52 (23.4 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 709 FSNPTSDVLTVAYALQCFELSKSPVEFCNE-YALHLKTMEEMSKLRKQLLHLL 760
F +P D +T+ ++ S +C E Y H +TM+ +R QL+ LL
Sbjct: 837 FWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQH-RTMKRARDVRDQLVGLL 888
Score = 38 (18.4 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 14/68 (20%), Positives = 29/68 (42%)
Query: 298 FEIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEILGEDEKLVEQKCPMDG 357
+ + ST+Q ++ DE+ F + + S + +D K EQ+ +
Sbjct: 267 YHLPDASTKQIPSQYVEDDEEDFRPGGDGAKWEEEQLMASMLHLGAKDAKRKEQEFELLL 326
Query: 358 DDPVDVLK 365
D+ VD ++
Sbjct: 327 DEKVDFIQ 334
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 393 (143.4 bits), Expect = 3.7e-63, Sum P(3) = 3.7e-63
Identities = 97/249 (38%), Positives = 144/249 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ +SR G+IG
Sbjct: 562 RESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-----TSR-GKIGC 615
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 616 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 675
Query: 145 -----LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 676 LTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYEA 732
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R +PV + ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 733 PIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 791
Query: 256 KLRKASKQL 264
L + K L
Sbjct: 792 ILYERMKSL 800
Score = 326 (119.8 bits), Expect = 3.7e-63, Sum P(3) = 3.7e-63
Identities = 72/191 (37%), Positives = 103/191 (53%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 804 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 863
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+ CYRLY+ + + + + EI +
Sbjct: 864 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 923
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 924 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 983
Query: 614 PMSPRHSRMLL 624
P+ P +ML+
Sbjct: 984 PLEPMLCKMLI 994
Score = 57 (25.1 bits), Expect = 3.7e-63, Sum P(3) = 3.7e-63
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 701 VAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+A AKF D LT+ ++ +K +C E + +++ +RKQ+L ++
Sbjct: 1027 LADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIM 1086
Score = 38 (18.4 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 579 PEVTALVEAERCLKALEALDSN-GRLT 604
P V V E+CL E L+ G +T
Sbjct: 1154 PVVAVAVSLEQCLSKFEDLNKELGLVT 1180
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 393 (143.4 bits), Expect = 4.2e-63, Sum P(3) = 4.2e-63
Identities = 97/249 (38%), Positives = 144/249 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ +SR G+IG
Sbjct: 531 RESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-----TSR-GKIGC 584
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 585 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 644
Query: 145 -----LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 645 LTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYEA 701
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R +PV + ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 702 PIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 760
Query: 256 KLRKASKQL 264
L + K L
Sbjct: 761 ILYERMKSL 769
Score = 326 (119.8 bits), Expect = 4.2e-63, Sum P(3) = 4.2e-63
Identities = 72/191 (37%), Positives = 103/191 (53%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 773 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 832
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+ CYRLY+ + + + + EI +
Sbjct: 833 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 892
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 893 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 952
Query: 614 PMSPRHSRMLL 624
P+ P +ML+
Sbjct: 953 PLEPMLCKMLI 963
Score = 57 (25.1 bits), Expect = 4.2e-63, Sum P(3) = 4.2e-63
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 701 VAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+A AKF D LT+ ++ +K +C E + +++ +RKQ+L ++
Sbjct: 996 LADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIM 1055
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 393 (143.4 bits), Expect = 4.2e-63, Sum P(3) = 4.2e-63
Identities = 97/249 (38%), Positives = 144/249 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ +SR G+IG
Sbjct: 554 RESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-----TSR-GKIGC 607
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 608 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 667
Query: 145 -----LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 668 LTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYEA 724
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R +PV + ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 725 PIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 783
Query: 256 KLRKASKQL 264
L + K L
Sbjct: 784 ILYERMKSL 792
Score = 326 (119.8 bits), Expect = 4.2e-63, Sum P(3) = 4.2e-63
Identities = 72/191 (37%), Positives = 103/191 (53%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 796 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 855
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+ CYRLY+ + + + + EI +
Sbjct: 856 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 915
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 916 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 975
Query: 614 PMSPRHSRMLL 624
P+ P +ML+
Sbjct: 976 PLEPMLCKMLI 986
Score = 57 (25.1 bits), Expect = 4.2e-63, Sum P(3) = 4.2e-63
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 701 VAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+A AKF D LT+ ++ +K +C E + +++ +RKQ+L ++
Sbjct: 1019 LADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIM 1078
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 393 (143.4 bits), Expect = 4.3e-63, Sum P(3) = 4.3e-63
Identities = 97/249 (38%), Positives = 144/249 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ +SR G+IG
Sbjct: 558 RESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-----TSR-GKIGC 611
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 612 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 671
Query: 145 -----LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 672 LTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYEA 728
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R +PV + ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 729 PIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 787
Query: 256 KLRKASKQL 264
L + K L
Sbjct: 788 ILYERMKSL 796
Score = 326 (119.8 bits), Expect = 4.3e-63, Sum P(3) = 4.3e-63
Identities = 72/191 (37%), Positives = 103/191 (53%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 800 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 859
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+ CYRLY+ + + + + EI +
Sbjct: 860 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 919
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 920 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 979
Query: 614 PMSPRHSRMLL 624
P+ P +ML+
Sbjct: 980 PLEPMLCKMLI 990
Score = 57 (25.1 bits), Expect = 4.3e-63, Sum P(3) = 4.3e-63
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 701 VAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+A AKF D LT+ ++ +K +C E + +++ +RKQ+L ++
Sbjct: 1023 LADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIM 1082
Score = 38 (18.4 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 412 PEQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAA 450
P C + +P V M D V + L A++P+AA
Sbjct: 120 PVLC-QPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAA 157
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 393 (143.4 bits), Expect = 4.4e-63, Sum P(3) = 4.4e-63
Identities = 97/249 (38%), Positives = 144/249 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ +SR G+IG
Sbjct: 562 RESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-----TSR-GKIGC 615
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 616 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 675
Query: 145 -----LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 676 LTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYEA 732
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R +PV + ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 733 PIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 791
Query: 256 KLRKASKQL 264
L + K L
Sbjct: 792 ILYERMKSL 800
Score = 326 (119.8 bits), Expect = 4.4e-63, Sum P(3) = 4.4e-63
Identities = 72/191 (37%), Positives = 103/191 (53%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 804 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 863
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+ CYRLY+ + + + + EI +
Sbjct: 864 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 923
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 924 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 983
Query: 614 PMSPRHSRMLL 624
P+ P +ML+
Sbjct: 984 PLEPMLCKMLI 994
Score = 57 (25.1 bits), Expect = 4.4e-63, Sum P(3) = 4.4e-63
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 701 VAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+A AKF D LT+ ++ +K +C E + +++ +RKQ+L ++
Sbjct: 1027 LADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIM 1086
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 393 (143.4 bits), Expect = 4.6e-63, Sum P(3) = 4.6e-63
Identities = 97/249 (38%), Positives = 144/249 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ +SR G+IG
Sbjct: 572 RESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-----TSR-GKIGC 625
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 626 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 685
Query: 145 -----LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 686 LTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYEA 742
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R +PV + ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 743 PIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 801
Query: 256 KLRKASKQL 264
L + K L
Sbjct: 802 ILYERMKSL 810
Score = 326 (119.8 bits), Expect = 4.6e-63, Sum P(3) = 4.6e-63
Identities = 72/191 (37%), Positives = 103/191 (53%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 814 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 873
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+ CYRLY+ + + + + EI +
Sbjct: 874 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 933
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 934 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 993
Query: 614 PMSPRHSRMLL 624
P+ P +ML+
Sbjct: 994 PLEPMLCKMLI 1004
Score = 57 (25.1 bits), Expect = 4.6e-63, Sum P(3) = 4.6e-63
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 701 VAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+A AKF D LT+ ++ +K +C E + +++ +RKQ+L ++
Sbjct: 1037 LADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIM 1096
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 393 (143.4 bits), Expect = 4.8e-63, Sum P(3) = 4.8e-63
Identities = 97/249 (38%), Positives = 144/249 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ +SR G+IG
Sbjct: 584 RESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-----TSR-GKIGC 637
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 638 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 697
Query: 145 -----LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 698 LTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYEA 754
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R +PV + ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 755 PIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 813
Query: 256 KLRKASKQL 264
L + K L
Sbjct: 814 ILYERMKSL 822
Score = 326 (119.8 bits), Expect = 4.8e-63, Sum P(3) = 4.8e-63
Identities = 72/191 (37%), Positives = 103/191 (53%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 826 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 885
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+ CYRLY+ + + + + EI +
Sbjct: 886 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 945
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 946 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 1005
Query: 614 PMSPRHSRMLL 624
P+ P +ML+
Sbjct: 1006 PLEPMLCKMLI 1016
Score = 57 (25.1 bits), Expect = 4.8e-63, Sum P(3) = 4.8e-63
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 701 VAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+A AKF D LT+ ++ +K +C E + +++ +RKQ+L ++
Sbjct: 1049 LADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIM 1108
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 393 (143.4 bits), Expect = 4.9e-63, Sum P(3) = 4.9e-63
Identities = 97/249 (38%), Positives = 144/249 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ +SR G+IG
Sbjct: 586 RESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-----TSR-GKIGC 639
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 640 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 699
Query: 145 -----LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 700 LTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYEA 756
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R +PV + ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 757 PIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACE 815
Query: 256 KLRKASKQL 264
L + K L
Sbjct: 816 ILYERMKSL 824
Score = 326 (119.8 bits), Expect = 4.9e-63, Sum P(3) = 4.9e-63
Identities = 72/191 (37%), Positives = 103/191 (53%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 828 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 887
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+ CYRLY+ + + + + EI +
Sbjct: 888 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 947
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 948 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 1007
Query: 614 PMSPRHSRMLL 624
P+ P +ML+
Sbjct: 1008 PLEPMLCKMLI 1018
Score = 57 (25.1 bits), Expect = 4.9e-63, Sum P(3) = 4.9e-63
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 701 VAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+A AKF D LT+ ++ +K +C E + +++ +RKQ+L ++
Sbjct: 1051 LADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIM 1110
Score = 37 (18.1 bits), Expect = 2.5e-25, Sum P(3) = 2.5e-25
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 304 STEQQTDRFSSYDEDQFDID-DNELDALSDSETESETE 340
S ++ DR D D+ D D D + D D + E + E
Sbjct: 179 SRDRDRDRDRDRDRDR-DRDRDRDKDRERDRDRERDRE 215
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 384 (140.2 bits), Expect = 6.0e-63, Sum P(2) = 6.0e-63
Identities = 93/254 (36%), Positives = 145/254 (57%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LPI ++++ A+ D+ ++I GETG GKTTQ+PQ+L E G+ ++ G
Sbjct: 405 IQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGY------TKGG 458
Query: 87 -RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+IG TQPRRVA ++ A RVA E+ + LG EVG+ +R + + +K+MTDG+LLRE
Sbjct: 459 MKIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREF 518
Query: 146 K-----ALY------EKQQQLLRSG---QCIEPKDRVFP-LKLILMSATLRVEDFISGGR 190
A Y E ++ L + I+ R P LK+++ SATL E F S
Sbjct: 519 LTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSS--- 575
Query: 191 LFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREV 250
F + P+ +P R+FPV ++++K E DY+ V+ IH G +LVF+TGQ E+
Sbjct: 576 FFDDAPVFRIPGRRFPVDIYYTKAPE-ADYLEACVVSVLQIHVTQSPGDVLVFLTGQEEI 634
Query: 251 EYLCSKLRKASKQL 264
E C L++ ++L
Sbjct: 635 EACCELLQERCRRL 648
Score = 343 (125.8 bits), Expect = 6.0e-63, Sum P(2) = 6.0e-63
Identities = 81/212 (38%), Positives = 114/212 (53%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVA 472
E C EL ++G + L VLP+YA LP+ Q ++F G R VVV+TN+A
Sbjct: 635 EACCELLQERCRRLGSK----ISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIA 690
Query: 473 ETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRL 532
ETSLTI GI YV+D G K K YN+ G+ES + S+ C+RL
Sbjct: 691 ETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRL 750
Query: 533 YSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLK 592
Y++ F + + + + EI + + VVLL+KS+ I+ + +F F PP LV A L
Sbjct: 751 YTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLY 810
Query: 593 ALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
AL AL+ G LT LG+ MA P+ P S+M+L
Sbjct: 811 ALGALNHLGELTKLGRRMAELPVDPMLSKMIL 842
Score = 40 (19.1 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 134 KFMTDGILLRELKALYEKQQQLLRSGQCIEPKDRVFP 170
K T IL R K YE+ Q+ ++ + E K ++ P
Sbjct: 192 KDKTRNILERNDKKAYEEAQKRIKMAE--EDKRKMLP 226
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 366 (133.9 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 100/276 (36%), Positives = 144/276 (52%)
Query: 10 QRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQ 69
Q PLA P P VE R++LPI +++ + + + ++ GETG GKTTQ+PQ
Sbjct: 59 QPPLAQPSASPY--PEAVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQ 116
Query: 70 FLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD 129
+L+E G G R I VTQPRRVA ++ A RV+ E LGK VG+ VR D D
Sbjct: 117 YLYEGGIG------RQAIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSD 170
Query: 130 SCSIKFMTDGILLRE-----LKALY------EKQQQLLRS----GQCIEPKDR-----VF 169
IKF+TDG+LLRE L Y E ++ L + G + R
Sbjct: 171 DTKIKFLTDGMLLREAISDCLLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKL 230
Query: 170 PLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVM 229
PLK+++MSAT+ V+ F + F P++ + RQ P+ + ++K+ + DY+ A V
Sbjct: 231 PLKVLVMSATMDVDLF---SQYFNGAPVLYLEGRQHPIQIFYTKQPQH-DYLHAALVSVF 286
Query: 230 SIHKRLPQG-GILVFVTGQREVEYLCSKLRKASKQL 264
IH+ P ILVF+TGQ E+E + R +K L
Sbjct: 287 QIHQEAPSSHDILVFLTGQEEIEAMSKTCRDIAKHL 322
Score = 340 (124.7 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 77/195 (39%), Positives = 107/195 (54%)
Query: 433 GVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKV 492
G ++ VLPLYA LP A QLRVF+ +G R V++STN+AETS+TI GIKYVVDTG K
Sbjct: 325 GCPSMLVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKA 384
Query: 493 KKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISK 552
KKYN +G+E +Q +SK CYRLY+ F + EI +
Sbjct: 385 KKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKF-EKMTVPEIQR 443
Query: 553 VPVDGVVLLMKSMNIDKVSNFPF---PTPPEVTALVEAERCLKALEALDSNGRLTALGKA 609
+ V+L + +M I V F F P+P + A + L ALE D LT +G+
Sbjct: 444 CNLASVMLQLLAMKIPNVLTFDFMSKPSPDHIQAAIAQLELLGALEHRDGQLTLTPMGRK 503
Query: 610 MAHYPMSPRHSRMLL 624
MA +P+ P+ ++ +L
Sbjct: 504 MAAFPLEPKFAKTIL 518
Score = 54 (24.1 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
KF + D LT+ + F+ + E+C E ++ K M ++++R QL
Sbjct: 558 KFVSSEGDHLTLLNVYRTFKNTGGNKEWCKENFVNSKNMMLVAEVRAQL 606
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 397 (144.8 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 96/270 (35%), Positives = 148/270 (54%)
Query: 10 QRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQ 69
+ P A P + ++ R+ LP+ +E++ A+ ++ +II GETG GKTTQ+PQ
Sbjct: 379 EEPSAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQ 438
Query: 70 FLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD 129
+LFE G+ + + +I TQPRRVA ++ A RVA E+G+ LG EVG+ +R + +
Sbjct: 439 YLFEEGY-----TKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSE 493
Query: 130 SCSIKFMTDGILLRELK-----ALY------EKQQQLLRSG---QCIEPKDRVFP-LKLI 174
+++MTDG+LLRE A Y E ++ L + I+ R P LK++
Sbjct: 494 RTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVL 553
Query: 175 LMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKR 234
+ SATL F + F + PI +P R+FPV + ++K E DY+ V+ IH
Sbjct: 554 VASATLDTARFST---FFDDAPIFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQIHVT 609
Query: 235 LPQGGILVFVTGQREVEYLCSKLRKASKQL 264
P G ILVF+TGQ E+E C L+ ++L
Sbjct: 610 QPPGDILVFLTGQEEIEAACEMLQDRCRRL 639
Score = 333 (122.3 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 80/204 (39%), Positives = 111/204 (54%)
Query: 424 EKMGDN-KRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPG 480
E + D +R G + L VLP+YA LP+ Q R+F+ G R VVV+TN+AETSLTI G
Sbjct: 630 EMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEG 689
Query: 481 IKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNN 540
I YV+D G K K YN G+ES + SK C+RLY++ + +
Sbjct: 690 IIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQH 749
Query: 541 ILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSN 600
L + + EI + + VVLL+KS+ I + +F F PP L+ A L AL AL+
Sbjct: 750 ELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHL 809
Query: 601 GRLTALGKAMAHYPMSPRHSRMLL 624
G LT G+ MA P+ P S+M+L
Sbjct: 810 GELTTSGRKMAELPVDPMLSKMIL 833
Score = 37 (18.1 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 705 SHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+ F P D L + + S ++C E + ++M +R+QL LL
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLL 926
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 397 (144.8 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 96/270 (35%), Positives = 148/270 (54%)
Query: 10 QRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQ 69
+ P A P + ++ R+ LP+ +E++ AV ++ +II GETG GKTTQ+PQ
Sbjct: 379 EEPAAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQ 438
Query: 70 FLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD 129
+LFE G+ + + +I TQPRRVA ++ A RVA E+G+ LG EVG+ +R + +
Sbjct: 439 YLFEEGY-----TQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSE 493
Query: 130 SCSIKFMTDGILLRELK-----ALY------EKQQQLLRSG---QCIEPKDRVFP-LKLI 174
+++MTDG+LLRE A Y E ++ L + I+ R P LK++
Sbjct: 494 RTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVL 553
Query: 175 LMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKR 234
+ SATL F + F + P+ +P R+FPV + ++K E DY+ V+ IH
Sbjct: 554 VASATLDTARFST---FFDDAPVFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQIHVT 609
Query: 235 LPQGGILVFVTGQREVEYLCSKLRKASKQL 264
P G ILVF+TGQ E+E C L+ ++L
Sbjct: 610 QPPGDILVFLTGQEEIEAACEMLQDRCRRL 639
Score = 333 (122.3 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 80/204 (39%), Positives = 111/204 (54%)
Query: 424 EKMGDN-KRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPG 480
E + D +R G + L VLP+YA LP+ Q R+F+ G R VVV+TN+AETSLTI G
Sbjct: 630 EMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEG 689
Query: 481 IKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNN 540
I YV+D G K K YN G+ES + SK C+RLY++ + +
Sbjct: 690 IIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQH 749
Query: 541 ILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSN 600
L + + EI + + VVLL+KS+ I + +F F PP L+ A L AL AL+
Sbjct: 750 ELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHL 809
Query: 601 GRLTALGKAMAHYPMSPRHSRMLL 624
G LT G+ MA P+ P S+M+L
Sbjct: 810 GELTTSGRKMAELPVDPMLSKMIL 833
Score = 37 (18.1 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 705 SHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+ F P D L + + S ++C E + ++M +R+QL LL
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLL 926
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 397 (144.8 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 96/270 (35%), Positives = 148/270 (54%)
Query: 10 QRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQ 69
+ P A P + ++ R+ LP+ +E++ AV ++ +II GETG GKTTQ+PQ
Sbjct: 379 EEPAAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQ 438
Query: 70 FLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD 129
+LFE G+ + + +I TQPRRVA ++ A RVA E+G+ LG EVG+ +R + +
Sbjct: 439 YLFEEGY-----TQKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSE 493
Query: 130 SCSIKFMTDGILLRELK-----ALY------EKQQQLLRSG---QCIEPKDRVFP-LKLI 174
+++MTDG+LLRE A Y E ++ L + I+ R P LK++
Sbjct: 494 RTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVL 553
Query: 175 LMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKR 234
+ SATL F + F + P+ +P R+FPV + ++K E DY+ V+ IH
Sbjct: 554 VASATLDTARFST---FFDDAPVFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQIHVT 609
Query: 235 LPQGGILVFVTGQREVEYLCSKLRKASKQL 264
P G ILVF+TGQ E+E C L+ ++L
Sbjct: 610 QPPGDILVFLTGQEEIEAACEMLQDRCRRL 639
Score = 333 (122.3 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 80/204 (39%), Positives = 111/204 (54%)
Query: 424 EKMGDN-KRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPG 480
E + D +R G + L VLP+YA LP+ Q R+F+ G R VVV+TN+AETSLTI G
Sbjct: 630 EMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEG 689
Query: 481 IKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNN 540
I YV+D G K K YN G+ES + SK C+RLY++ + +
Sbjct: 690 IIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQH 749
Query: 541 ILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSN 600
L + + EI + + VVLL+KS+ I + +F F PP L+ A L AL AL+
Sbjct: 750 ELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHL 809
Query: 601 GRLTALGKAMAHYPMSPRHSRMLL 624
G LT G+ MA P+ P S+M+L
Sbjct: 810 GELTTSGRKMAELPVDPMLSKMIL 833
Score = 37 (18.1 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 705 SHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+ F P D L + + S ++C E + ++M +R+QL LL
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLL 926
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 384 (140.2 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
Identities = 100/253 (39%), Positives = 141/253 (55%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LP+ +++++ AV ++ +II GETG GKTTQVPQ+L EAGF ++
Sbjct: 245 LDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDK-----K 299
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
IG TQPRRVA ++ A RVA E+G+ LG EVG+ +R + D +K+MTDG L RE
Sbjct: 300 MIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFL 359
Query: 147 -----ALY------EKQQQLLRSGQCIE-PKD--RVFP-LKLILMSATLRVEDFISGGRL 191
A Y E ++ L + KD R P LKL++ SATL E F +
Sbjct: 360 SEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSA---F 416
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F + PI +P R++PV + ++K E DYI V+ IH P G ILVF+TGQ E+E
Sbjct: 417 FDDAPIFRIPGRRYPVDIFYTKAPE-ADYIDACCVSVLQIHATQPLGDILVFLTGQDEIE 475
Query: 252 YLCSKLRKASKQL 264
L K+L
Sbjct: 476 TCQEVLHDRVKRL 488
Score = 338 (124.0 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
Identities = 77/212 (36%), Positives = 116/212 (54%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVA 472
E C E+ V+++G R L V+P+YA LP+ Q ++FE R V+++TN+A
Sbjct: 475 ETCQEVLHDRVKRLGSKIRE----LIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIA 530
Query: 473 ETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRL 532
ETSLTI I YV+D G K +NS G+ES + ISK C+RL
Sbjct: 531 ETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRL 590
Query: 533 YSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLK 592
Y++ + + L D + EI ++ + VL++K++ I+ + +F F PP LV A L
Sbjct: 591 YTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLY 650
Query: 593 ALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
AL AL+ +G LT LG+ MA +P+ P +MLL
Sbjct: 651 ALGALNHHGELTKLGRRMAEFPVDPMMGKMLL 682
Score = 69 (29.3 bits), Expect = 3.6e-29, Sum P(3) = 3.6e-29
Identities = 25/101 (24%), Positives = 48/101 (47%)
Query: 258 RKASKQLLVNSSKEN-KGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYD 316
R+ KQLL N +KE+ K ++ N +D+ E +E E+ + + +++ ++
Sbjct: 126 REYKKQLL-NIAKEHEKARELERIQRYNMPQDLKKGERSEYVEVDEFEKQPNSEQ-KKWE 183
Query: 317 EDQFDIDDNELDALSDSETESETEILGEDEKLVEQKCPMDG 357
+Q A D++ E E E+L +D+ Q +DG
Sbjct: 184 AEQLASARFHFGA-KDAKAEEEYELLLDDQIDFIQALTLDG 223
Score = 42 (19.8 bits), Expect = 1.5e-62, Sum P(3) = 1.5e-62
Identities = 11/59 (18%), Positives = 28/59 (47%)
Query: 702 AKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
A + F++ D L++ + + ++C E + ++M+ +R+QL+ L+
Sbjct: 717 ADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLM 775
Score = 38 (18.4 bits), Expect = 5.7e-26, Sum P(3) = 5.7e-26
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 268 SSKENKGNQVVADS--EPNATKDINMKEINEAFEIQGYSTEQQTDR 311
S K K + S EP++ ++ +K++ E E ++ DR
Sbjct: 2 SGKNRKRTASSSSSGEEPDSEEESRLKDLQERDEFASRLKKRDDDR 47
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 377 (137.8 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 97/258 (37%), Positives = 147/258 (56%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
++ + R+ LPI ++QE++ + DNS VI+ GETG GKTTQ+ Q+L + G+
Sbjct: 521 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGY----- 575
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
+ G IG TQPRRVA ++ AKRV+ E+G +LG+EVG+ +R + ++ IK+MTDGIL
Sbjct: 576 -TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGIL 634
Query: 142 LRE-LKAL----Y------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE L+ Y E ++ L + G E R LKLI+ SAT+ + F
Sbjct: 635 LRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFA 694
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
+ F N PI +P R FPV + FSK T DY+ A K+ + +H G IL+F+ G
Sbjct: 695 A---FFGNVPIFHIPGRTFPVDILFSK-TPQEDYVEAAVKQSLQVHLSGAPGDILIFMPG 750
Query: 247 QREVEYLCSKLRKASKQL 264
Q ++E ++ + ++L
Sbjct: 751 QEDIEVTSDQIVEHLEEL 768
Score = 322 (118.4 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 72/215 (33%), Positives = 117/215 (54%)
Query: 410 PTPEQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVST 469
P E S VE + + + A AL VLP+Y+ LP+ Q ++F+ +G R +V+T
Sbjct: 749 PGQEDIEVTSDQIVEHLEELENAP--ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT 806
Query: 470 NVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHC 529
N+AETSLT+ GI +V+D+G K+K +N G+++ +I IS+ C
Sbjct: 807 NIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQC 866
Query: 530 YRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAER 589
+RLY+ + + N L + EI + + VVLL+KS+ + + F F PP ++ +
Sbjct: 867 FRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMY 926
Query: 590 CLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
L L ALD+ G LT+ G+ M +P+ P S+ML+
Sbjct: 927 QLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI 961
Score = 73 (30.8 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
KF+ P SD LT ++ + +CN++ +H K M ++ ++R QL ++ Q
Sbjct: 1001 KFAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQ 1056
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 379 (138.5 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 101/264 (38%), Positives = 144/264 (54%)
Query: 17 IVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGF 76
I V V + R LPI ++ ++M+A+ N+ +I+ GETG GKTTQ+PQ+L EA +
Sbjct: 614 ISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANY 673
Query: 77 GSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFM 136
+ G +G TQPRRVA ++ AKRV+ E G LG+EVG+ +R D + IK++
Sbjct: 674 ------TEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYL 727
Query: 137 TDGILLRE-----LKALY------EKQQQLLRSGQ--CIEPKDRV---FPLKLILMSATL 180
TDG+LLRE L Y E ++ + + C+ KD V KLI+ SATL
Sbjct: 728 TDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLL-KDVVRKRADFKLIVTSATL 786
Query: 181 RVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGI 240
E F + F N PI +P + FPV + SK E DY+ + V++IH G I
Sbjct: 787 DAEKFST---YFFNSPIFTIPGKIFPVEILHSKEPES-DYVEASLITVLNIHLNEHPGDI 842
Query: 241 LVFVTGQREVEYLCSKLRKASKQL 264
LVF+TGQ E+ C L + K+L
Sbjct: 843 LVFLTGQDEINTACEILHERMKKL 866
Score = 343 (125.8 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 73/189 (38%), Positives = 108/189 (57%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP+Y+ LP+ Q +FE G R +++TN+AE SLTI GI +V+D G K+KKY+
Sbjct: 874 LIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYD 933
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
S ++S + ISK CYRLY+ + N + + S EI ++ +
Sbjct: 934 SKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLG 993
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
+VLL+K++ I+ +F F P V L+ + L L ALD NG LT LGK MA++PM
Sbjct: 994 SIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPME 1053
Query: 617 PRHSRMLLT 625
P S++LLT
Sbjct: 1054 PNLSKILLT 1062
Score = 50 (22.7 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 12/57 (21%), Positives = 26/57 (45%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQN 764
KF P D++T ++ + +C+E + + ++ +RKQ+L + N
Sbjct: 1101 KFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYN 1157
Score = 41 (19.5 bits), Expect = 7.7e-27, Sum P(3) = 7.7e-27
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 9 LQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEA-VNDNSAVIICGET 59
+Q+ + + +V + NE +N + D I E++I+E VN+ + G+T
Sbjct: 470 IQQLIKSGVVFDENIRNEYKNLKIDEKIED-EEDIIEIEVNEKEPAFLKGQT 520
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 379 (138.5 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 101/264 (38%), Positives = 144/264 (54%)
Query: 17 IVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGF 76
I V V + R LPI ++ ++M+A+ N+ +I+ GETG GKTTQ+PQ+L EA +
Sbjct: 614 ISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANY 673
Query: 77 GSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFM 136
+ G +G TQPRRVA ++ AKRV+ E G LG+EVG+ +R D + IK++
Sbjct: 674 ------TEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYL 727
Query: 137 TDGILLRE-----LKALY------EKQQQLLRSGQ--CIEPKDRV---FPLKLILMSATL 180
TDG+LLRE L Y E ++ + + C+ KD V KLI+ SATL
Sbjct: 728 TDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLL-KDVVRKRADFKLIVTSATL 786
Query: 181 RVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGI 240
E F + F N PI +P + FPV + SK E DY+ + V++IH G I
Sbjct: 787 DAEKFST---YFFNSPIFTIPGKIFPVEILHSKEPES-DYVEASLITVLNIHLNEHPGDI 842
Query: 241 LVFVTGQREVEYLCSKLRKASKQL 264
LVF+TGQ E+ C L + K+L
Sbjct: 843 LVFLTGQDEINTACEILHERMKKL 866
Score = 343 (125.8 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 73/189 (38%), Positives = 108/189 (57%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP+Y+ LP+ Q +FE G R +++TN+AE SLTI GI +V+D G K+KKY+
Sbjct: 874 LIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYD 933
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
S ++S + ISK CYRLY+ + N + + S EI ++ +
Sbjct: 934 SKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLG 993
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
+VLL+K++ I+ +F F P V L+ + L L ALD NG LT LGK MA++PM
Sbjct: 994 SIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPME 1053
Query: 617 PRHSRMLLT 625
P S++LLT
Sbjct: 1054 PNLSKILLT 1062
Score = 50 (22.7 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 12/57 (21%), Positives = 26/57 (45%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQN 764
KF P D++T ++ + +C+E + + ++ +RKQ+L + N
Sbjct: 1101 KFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYN 1157
Score = 41 (19.5 bits), Expect = 7.7e-27, Sum P(3) = 7.7e-27
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 9 LQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEA-VNDNSAVIICGET 59
+Q+ + + +V + NE +N + D I E++I+E VN+ + G+T
Sbjct: 470 IQQLIKSGVVFDENIRNEYKNLKIDEKIED-EEDIIEIEVNEKEPAFLKGQT 520
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 385 (140.6 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 97/253 (38%), Positives = 142/253 (56%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ RK LP+ +++++AV + +II GETG GKTTQ+PQ+L EAGF S++G
Sbjct: 460 IQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGF------SKTG 513
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
+IG TQPRRVA ++ A RVA E+G LG EVG+ +R + +++MTDG+L+RE
Sbjct: 514 KIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFL 573
Query: 147 -----ALY------EKQQQLLRSGQCIEP-KD--RVFP-LKLILMSATLRVEDFISGGRL 191
A Y E ++ L + KD R P LKL++ SAT+ E F
Sbjct: 574 TAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSD---Y 630
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F P +P R++ VT H+++ E DY+ A V+ IH P G ILVF+TGQ EV+
Sbjct: 631 FDGAPTFNIPGRKYEVTTHYTQAPE-ADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVD 689
Query: 252 YLCSKLRKASKQL 264
L+ ++ L
Sbjct: 690 QAAEMLQTRTRGL 702
Score = 332 (121.9 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 72/188 (38%), Positives = 107/188 (56%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L + +Y+ LP Q ++FE R VV++TN+AETSLTI GI YV+D G K K +N
Sbjct: 709 LIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFN 768
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ES I +S+ C+RL+++ F+N L + + EI + +
Sbjct: 769 PRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLG 828
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVLL+KSM I+ + NF F PP L+ A L AL AL+ G+LT LG+ MA +P+
Sbjct: 829 NVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVD 888
Query: 617 PRHSRMLL 624
P+ S+M++
Sbjct: 889 PQLSKMII 896
Score = 54 (24.1 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 28/147 (19%), Positives = 65/147 (44%)
Query: 213 KRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKEN 272
+ + +VDYI KK ++ F++ E ++ + K+ Q L+N S++
Sbjct: 23 RESTMVDYIIALSKKAKDVNS---------FISTLTEQDFPINSNTKSFAQELLNKSQQK 73
Query: 273 KGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSD 332
N + + S +++ ++ ++ E + ++ + + DI ++ + SD
Sbjct: 74 IQN-ITSSSSSSSSTSLSSSSSSKDKEKEKIEFLKKNKSYKLVIDHDDDIVNSSGSSDSD 132
Query: 333 SETESETEILGEDEKLVEQKCPMDGDD 359
S++E + + + EK E+K D D
Sbjct: 133 SDSERKRK---KKEKKKEKKDKKDKKD 156
Score = 51 (23.0 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 709 FSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
F +P D LT+ + S V++C E + ++M+ +R QL LL
Sbjct: 938 FFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLL 989
Score = 50 (22.7 bits), Expect = 5.8e-27, Sum P(3) = 5.8e-27
Identities = 23/100 (23%), Positives = 43/100 (43%)
Query: 273 KGNQVVADSEPNATKDINMKEINEAFEIQGYST----EQQTDRFSSY-DEDQFDIDDNEL 327
K N+ ++ N D N + N + Q Y + E D ++ +ED+++ + E+
Sbjct: 179 KPNEKEDENNNNENND-NNNDNNNLQKRQPYKSIIEEENNNDNNNNNGEEDEYEREQREV 237
Query: 328 DALSDSETESETEILGEDEKLVEQKCPMDGDDPVDVLKEN 367
LSD I DEK ++K D + + ++N
Sbjct: 238 KELSD-------RIKKRDEKSTKKKIVDDSETKESIERKN 270
Score = 48 (22.0 bits), Expect = 9.4e-27, Sum P(3) = 9.4e-27
Identities = 19/71 (26%), Positives = 28/71 (39%)
Query: 262 KQLLVNSSKENKGNQVVADSEPNAT-KDINMKEINEAF-EIQGYSTEQQTDRFSSYD--- 316
K +N +K KGN + S N K+ + A E +G ST Y+
Sbjct: 363 KSSYINDNKNKKGNDSSSSSSYNPEQKEWEQNRMKSAISENRGLSTANIGGGNEEYEYVF 422
Query: 317 EDQFDIDDNEL 327
EDQ + E+
Sbjct: 423 EDQIEFIKEEV 433
Score = 38 (18.4 bits), Expect = 1.0e-31, Sum P(3) = 1.0e-31
Identities = 8/40 (20%), Positives = 20/40 (50%)
Query: 575 FPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYP 614
FP P+++ ++ A K E + + + ++G + + P
Sbjct: 885 FPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRP 924
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 395 (144.1 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 94/270 (34%), Positives = 149/270 (55%)
Query: 10 QRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQ 69
+ P A P + ++ R+ LP+ +E++ A+ ++ +II GETG GKTTQ+PQ
Sbjct: 375 EEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQ 434
Query: 70 FLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD 129
+LFE G+ +++ +I TQPRRVA ++ A RVA E+G+ LG EVG+ +R + +
Sbjct: 435 YLFEEGY-----TNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSE 489
Query: 130 SCSIKFMTDGILLRELK-----ALY------EKQQQLLRSG---QCIEPKDRVFP-LKLI 174
+++MTDG+LLRE A Y E ++ L + I+ R P LK++
Sbjct: 490 RTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVL 549
Query: 175 LMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKR 234
+ SAT+ F + F + P+ +P R+FPV + ++K E DY+ V+ IH
Sbjct: 550 VASATMDTARFST---FFDDAPVFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQIHVT 605
Query: 235 LPQGGILVFVTGQREVEYLCSKLRKASKQL 264
P G ILVF+TGQ E+E C L+ ++L
Sbjct: 606 QPPGDILVFLTGQEEIEAACEMLQDRCRRL 635
Score = 333 (122.3 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 80/204 (39%), Positives = 111/204 (54%)
Query: 424 EKMGDN-KRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPG 480
E + D +R G + L VLP+YA LP+ Q R+F+ G R VVV+TN+AETSLTI G
Sbjct: 626 EMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEG 685
Query: 481 IKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNN 540
I YV+D G K K YN G+ES + SK C+RLY++ + +
Sbjct: 686 IIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQH 745
Query: 541 ILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSN 600
L + + EI + + VVLL+KS+ I + +F F PP L+ A L AL AL+
Sbjct: 746 ELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHL 805
Query: 601 GRLTALGKAMAHYPMSPRHSRMLL 624
G LT G+ MA P+ P S+M+L
Sbjct: 806 GELTTSGRKMAELPVDPMLSKMIL 829
Score = 37 (18.1 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 705 SHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+ F P D L + + S ++C E + ++M +R+QL LL
Sbjct: 867 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLL 922
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 390 (142.3 bits), Expect = 3.5e-62, Sum P(2) = 3.5e-62
Identities = 94/261 (36%), Positives = 141/261 (54%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
S+ ++ RK+LPI + + + DN +++ GETG GK+TQ+PQFL E + C
Sbjct: 84 SKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGC 143
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
+ +TQPRRVA + AKRVA E G LG++VG+ +R D IK++TDG+L
Sbjct: 144 ------VAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGML 197
Query: 142 LREL-----------KALYEKQQQLLRSGQCIEPKDRVF---P-LKLILMSATLRVEDFI 186
LREL L E ++ L + + ++ P L++I+MSATL E F
Sbjct: 198 LRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERF- 256
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
F I + RQ+PV +H++ E DY+ + + +H +LP G ILVF+TG
Sbjct: 257 --SEFFDGAEICYISGRQYPVQIHYTYTPE-PDYLDACLRTIFQLHTKLPPGDILVFLTG 313
Query: 247 QREVEYLCSKLRKASKQLLVN 267
Q E+E L + ++ SKQL N
Sbjct: 314 QDEIEALEALIKSYSKQLPSN 334
Score = 321 (118.1 bits), Expect = 3.5e-62, Sum P(2) = 3.5e-62
Identities = 84/267 (31%), Positives = 127/267 (47%)
Query: 441 PLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANG 500
PL+A LP QL+VF R VV+STN+AETS+TI GI+YV+DTG K+K++NS G
Sbjct: 342 PLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLG 401
Query: 501 IESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVL 560
+ES +Q IS+ CYR+Y+ A F+ LP + EI ++ + VL
Sbjct: 402 LESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDK-LPKETIPEIKRIDLSQAVL 460
Query: 561 LMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPRHS 620
+K+ + V NF + PP L+ A L ++ ALD NG + LG M+ P+ P +
Sbjct: 461 TLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLA 520
Query: 621 RMLLT------LIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQLEGTQTNSNDSEL 674
R +L L + + V S L EG ++
Sbjct: 521 RAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALR 580
Query: 675 EERDNALDSEDPMCRQEKLGKRKLKEV 701
+ +++ DS C Q + +R LK +
Sbjct: 581 QYLESSHDSRKQWCSQNFINRRALKTI 607
Score = 54 (24.1 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 708 KFSNPTSDVLTVAYAL-QCFELSK-SPVEFCNEYALHLKTMEEMSKLRKQL 756
KF + D+LT AL Q E S S ++C++ ++ + ++ + +RKQL
Sbjct: 564 KFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQL 614
Score = 41 (19.5 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 27/119 (22%), Positives = 50/119 (42%)
Query: 304 STEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEILGEDEK-LVEQKCPMDGDDPVD 362
+T++ T ++ E D NE+ +S E +E K ++EQ+ + + D
Sbjct: 44 TTKKSTVSVVNFLEQDTDFGANEVVGSDNSSPEKRSENSPSKRKDILEQRKNLPIWEAHD 103
Query: 363 VLKENWSLGSLKLAFEVLSGKNASGPSSQMKLSTPAIPEQCTELPPTPTPEQCPELSSP 421
L + + ++ V+ G+ SG S+Q IP+ E P E C ++ P
Sbjct: 104 TLCQQ--IQDNRVI--VVVGETGSGKSTQ-------IPQFLNECPYAQ--EGCVAITQP 149
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 380 (138.8 bits), Expect = 7.3e-62, Sum P(3) = 7.3e-62
Identities = 96/254 (37%), Positives = 142/254 (55%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LP+ Q++M + +N+ VII GETG GKTTQ+ Q+L E GFG SG
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGD------SG 487
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL- 145
IG TQPRRVA ++ A+RVA E+G+ LG++VG+ +R + + IK+MTDGILLRE
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 146 --------KALY--EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRL 191
A+ E ++ L + G E + LKLI+ SAT+ + F
Sbjct: 548 GDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFAD---F 604
Query: 192 FR-NPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREV 250
F N P +P R FPV + F RT + DY+ A K+ ++IH G IL+F+ GQ ++
Sbjct: 605 FGGNCPTFTIPGRTFPVEL-FHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDI 663
Query: 251 EYLCSKLRKASKQL 264
E C +++ +L
Sbjct: 664 ECTCEMIKEKLGEL 677
Score = 314 (115.6 bits), Expect = 7.3e-62, Sum P(3) = 7.3e-62
Identities = 70/201 (34%), Positives = 110/201 (54%)
Query: 424 EKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKY 483
EK+G+ A L VLP+Y+ LP+ Q ++F+ G R +V+TN+AETSLT+ GI +
Sbjct: 672 EKLGELDEAP--PLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILF 729
Query: 484 VVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILP 543
V+D G K+K YN G+++ I +S+ CYRLY+ F + L
Sbjct: 730 VIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELL 789
Query: 544 DFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRL 603
+ EI + + VVLL+KS+ +D + F F P ++ + L L ALD+ G+L
Sbjct: 790 KSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQL 849
Query: 604 TALGKAMAHYPMSPRHSRMLL 624
T +G+ M +P+ P S+ML+
Sbjct: 850 TPMGRKMVEFPLDPTLSKMLI 870
Score = 70 (29.7 bits), Expect = 7.3e-62, Sum P(3) = 7.3e-62
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
+E A KF P SD LT + K ++C + LH+K ++++ ++R QL
Sbjct: 901 EEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKE 960
Query: 759 LL 760
++
Sbjct: 961 IM 962
Score = 39 (18.8 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 266 VNSSKENKGNQVVADSEPNATKDINMKEIN-EAFEIQGYSTEQQTDRFSSYDEDQF 320
V S KE K D E A + K ++ E ++ +G + + + + F+ D+F
Sbjct: 201 VRSVKEEKAEPTFHDDEERAQWEEEQKNLDREWYDNEG-AFDDEYNPFNKVS-DEF 254
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 380 (138.8 bits), Expect = 7.3e-62, Sum P(3) = 7.3e-62
Identities = 96/254 (37%), Positives = 142/254 (55%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LP+ Q++M + +N+ VII GETG GKTTQ+ Q+L E GFG SG
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGD------SG 487
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL- 145
IG TQPRRVA ++ A+RVA E+G+ LG++VG+ +R + + IK+MTDGILLRE
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 146 --------KALY--EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRL 191
A+ E ++ L + G E + LKLI+ SAT+ + F
Sbjct: 548 GDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFAD---F 604
Query: 192 FR-NPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREV 250
F N P +P R FPV + F RT + DY+ A K+ ++IH G IL+F+ GQ ++
Sbjct: 605 FGGNCPTFTIPGRTFPVEL-FHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDI 663
Query: 251 EYLCSKLRKASKQL 264
E C +++ +L
Sbjct: 664 ECTCEMIKEKLGEL 677
Score = 314 (115.6 bits), Expect = 7.3e-62, Sum P(3) = 7.3e-62
Identities = 70/201 (34%), Positives = 110/201 (54%)
Query: 424 EKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKY 483
EK+G+ A L VLP+Y+ LP+ Q ++F+ G R +V+TN+AETSLT+ GI +
Sbjct: 672 EKLGELDEAP--PLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILF 729
Query: 484 VVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILP 543
V+D G K+K YN G+++ I +S+ CYRLY+ F + L
Sbjct: 730 VIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELL 789
Query: 544 DFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRL 603
+ EI + + VVLL+KS+ +D + F F P ++ + L L ALD+ G+L
Sbjct: 790 KSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQL 849
Query: 604 TALGKAMAHYPMSPRHSRMLL 624
T +G+ M +P+ P S+ML+
Sbjct: 850 TPMGRKMVEFPLDPTLSKMLI 870
Score = 70 (29.7 bits), Expect = 7.3e-62, Sum P(3) = 7.3e-62
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
+E A KF P SD LT + K ++C + LH+K ++++ ++R QL
Sbjct: 901 EEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKE 960
Query: 759 LL 760
++
Sbjct: 961 IM 962
Score = 39 (18.8 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 266 VNSSKENKGNQVVADSEPNATKDINMKEIN-EAFEIQGYSTEQQTDRFSSYDEDQF 320
V S KE K D E A + K ++ E ++ +G + + + + F+ D+F
Sbjct: 201 VRSVKEEKAEPTFHDDEERAQWEEEQKNLDREWYDNEG-AFDDEYNPFNKVS-DEF 254
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 389 (142.0 bits), Expect = 1.1e-61, Sum P(2) = 1.1e-61
Identities = 98/278 (35%), Positives = 152/278 (54%)
Query: 3 GNLPSSLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCG 62
G + + Q L A I R ++ RK LPI + E + A+ ++I GETG G
Sbjct: 342 GKVLTGEQLYLQAQIDAAEKRQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSG 401
Query: 63 KTTQVPQFLFEAGFGSNRCSSRSG-RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQV 121
KTTQ+PQ+L EAG+ ++ G R+G TQPRRVA ++ A RVA E+G+ +G EVG+ +
Sbjct: 402 KTTQLPQYLHEAGY------TKDGMRVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSI 455
Query: 122 RHDKKIGDSCSIKFMTDGILLREL---------KALY--EKQQQLLRSGQCIE-PKDRVF 169
R + D +K+MTDG+LLRE AL E ++ + + + KD
Sbjct: 456 RFEDNTSDKTILKYMTDGMLLREFMTEPDLSSYSALMIDEAHERTVHTDILLALVKDLAR 515
Query: 170 P---LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYK 226
LKL++ SAT+ E F S F + PI +P R++PV ++++ E +Y+ A
Sbjct: 516 ERKDLKLLISSATMNAEKFAS---YFDDAPIFNIPGRRYPVDIYYTPAPE-ANYLSAAIT 571
Query: 227 KVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
V IH P+G IL+F+TGQ E+E ++ + +++L
Sbjct: 572 TVFQIHTTQPKGDILIFLTGQDEIEAAEMQITETARKL 609
Score = 325 (119.5 bits), Expect = 1.1e-61, Sum P(2) = 1.1e-61
Identities = 72/210 (34%), Positives = 115/210 (54%)
Query: 417 ELSSPDVEKMGDNKRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAET 474
E+ + +++ ++ G V L + P+YA LP+ Q ++FE E R VV++TN+AET
Sbjct: 594 EIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNIAET 653
Query: 475 SLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYS 534
SLTI GI YV+D G K YN A G+ + + S+ C+RLY+
Sbjct: 654 SLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYT 713
Query: 535 SAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKAL 594
+ N + + + EI + ++GVVL +KS+ I+++ +F F PP AL+ A L AL
Sbjct: 714 KYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFAL 773
Query: 595 EALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
+ L+ G LT LG+ MA +P P ++ +L
Sbjct: 774 QGLNHKGELTKLGRQMAEFPTDPMLAKAVL 803
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 389 (142.0 bits), Expect = 1.2e-61, Sum P(3) = 1.2e-61
Identities = 93/264 (35%), Positives = 146/264 (55%)
Query: 16 PIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAG 75
P+ + ++ R+ LP+ +E++ A+ ++ +II GETG GKTTQ+PQ+LFE G
Sbjct: 384 PLSAQAQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEG 443
Query: 76 FGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKF 135
+ + + +I TQPRRVA ++ A RVA E+G+ LG EVG+ +R + + +++
Sbjct: 444 Y-----TKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRY 498
Query: 136 MTDGILLRELK-----ALY------EKQQQLLRSG---QCIEPKDRVFP-LKLILMSATL 180
MTDG+LLRE A Y E ++ L + I+ R P LK+++ SATL
Sbjct: 499 MTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATL 558
Query: 181 RVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGI 240
F + F + P+ +P R+FPV + ++K E DY+ V+ IH P G I
Sbjct: 559 DTARFSA---FFDDAPVFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQIHVTQPPGDI 614
Query: 241 LVFVTGQREVEYLCSKLRKASKQL 264
LVF+TGQ E+E C L+ ++L
Sbjct: 615 LVFLTGQEEIEAACEMLQDRCRRL 638
Score = 333 (122.3 bits), Expect = 1.2e-61, Sum P(3) = 1.2e-61
Identities = 80/204 (39%), Positives = 111/204 (54%)
Query: 424 EKMGDN-KRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPG 480
E + D +R G + L VLP+YA LP+ Q R+F+ G R VVV+TN+AETSLTI G
Sbjct: 629 EMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEG 688
Query: 481 IKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNN 540
I YV+D G K K YN G+ES + SK C+RLY++ + +
Sbjct: 689 IIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQH 748
Query: 541 ILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSN 600
L + + EI + + VVLL+KS+ I + +F F PP L+ A L AL AL+
Sbjct: 749 ELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHL 808
Query: 601 GRLTALGKAMAHYPMSPRHSRMLL 624
G LT G+ MA P+ P S+M+L
Sbjct: 809 GELTTSGRKMAELPVDPMLSKMIL 832
Score = 37 (18.1 bits), Expect = 1.2e-61, Sum P(3) = 1.2e-61
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 705 SHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+ F P D L + + S ++C E + ++M +R+QL LL
Sbjct: 870 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLL 925
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 384 (140.2 bits), Expect = 1.5e-61, Sum P(3) = 1.5e-61
Identities = 98/253 (38%), Positives = 143/253 (56%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LP+ +++++AV +N +I+ GETG GKTTQ+ Q+L EAGF + G
Sbjct: 535 IKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANE------G 588
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-- 144
IG TQPRRVA ++ AKRV+ E+G LG+EVG+ +R + + IK+MTDG+L RE
Sbjct: 589 VIGCTQPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIV 648
Query: 145 ----LKA-----LYEKQQQLLRSG---QCIEPKDRVFP-LKLILMSATLRVEDFISGGRL 191
LK L E ++ + + ++ R P LK+I+ SATL + F +
Sbjct: 649 IDPDLKRYSVIMLDEAHERTIATDVLFALLKKATRRRPDLKIIVTSATLDADKFSA---Y 705
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F PI +P R FPV + +SK E DY+ A VM IH P G IL+F+TGQ E++
Sbjct: 706 FNECPIFTIPGRTFPVEILYSKDPES-DYLDAALTTVMQIHIDEPPGDILLFLTGQEEID 764
Query: 252 YLCSKLRKASKQL 264
C L + K L
Sbjct: 765 TSCEILFERMKAL 777
Score = 321 (118.1 bits), Expect = 1.5e-61, Sum P(3) = 1.5e-61
Identities = 70/195 (35%), Positives = 106/195 (54%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP Q R+F+ G R VV++TN+AETS+TI I YVVD G K
Sbjct: 781 VPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQN 840
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
Y+ G++S + IS+ C+RLY+ A + + S EI +
Sbjct: 841 AYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQ 900
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ +LL+K+M I+ + +F F PP + ++ A L AL ALD G LT LG+ MA +
Sbjct: 901 NLSNTILLLKAMGINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADF 960
Query: 614 PMSPRHSRMLLTLIQ 628
PM P S++L+ ++
Sbjct: 961 PMEPSLSKVLIASVE 975
Score = 57 (25.1 bits), Expect = 1.5e-61, Sum P(3) = 1.5e-61
Identities = 13/59 (22%), Positives = 26/59 (44%)
Query: 702 AKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
A AKF +P D LT+ ++ S+ +C E + + + +R Q+ ++
Sbjct: 1005 ADAKKAKFHDPNGDHLTLLNVYNAWKQSRYSKPWCAENFIQFRALTRARDVRNQIERIM 1063
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 388 (141.6 bits), Expect = 1.6e-61, Sum P(3) = 1.6e-61
Identities = 94/253 (37%), Positives = 143/253 (56%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
V+ R+ LP+ +E++ A+ D+ +II GETG GKTTQ+PQ+LFE G+ + +
Sbjct: 393 VQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGY-----TKKGM 447
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
+I TQPRRVA ++ A RVA E+G+ LG EVG+ +R + + +++MTDG+LLRE
Sbjct: 448 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 507
Query: 147 -----ALY------EKQQQLLRSG---QCIEPKDRVFP-LKLILMSATLRVEDFISGGRL 191
A Y E ++ L + I+ R P LK+++ SATL F +
Sbjct: 508 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFST---F 564
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F + P+ +P R+FPV + ++K E DY+ V+ IH P G ILVF+TGQ E+E
Sbjct: 565 FDDAPVFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIE 623
Query: 252 YLCSKLRKASKQL 264
C L+ ++L
Sbjct: 624 AACEMLQDRCRRL 636
Score = 333 (122.3 bits), Expect = 1.6e-61, Sum P(3) = 1.6e-61
Identities = 80/204 (39%), Positives = 111/204 (54%)
Query: 424 EKMGDN-KRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPG 480
E + D +R G + L VLP+YA LP+ Q R+F+ G R VVV+TN+AETSLTI G
Sbjct: 627 EMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEG 686
Query: 481 IKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNN 540
I YV+D G K K YN G+ES + SK C+RLY++ + +
Sbjct: 687 IIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQH 746
Query: 541 ILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSN 600
L + + EI + + VVLL+KS+ I + +F F PP L+ A L AL AL+
Sbjct: 747 ELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHL 806
Query: 601 GRLTALGKAMAHYPMSPRHSRMLL 624
G LT G+ MA P+ P S+M+L
Sbjct: 807 GELTTSGRKMAELPVDPMLSKMIL 830
Score = 37 (18.1 bits), Expect = 1.6e-61, Sum P(3) = 1.6e-61
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 705 SHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+ F P D L + + S ++C E + ++M +R+QL LL
Sbjct: 868 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLL 923
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 359 (131.4 bits), Expect = 3.9e-61, Sum P(3) = 3.9e-61
Identities = 101/276 (36%), Positives = 143/276 (51%)
Query: 10 QRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQ 69
Q PLA P P VE R+ LPI +++ + + ++ GETG GKTTQ+PQ
Sbjct: 52 QPPLAQPSASPY--PEAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQ 109
Query: 70 FLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD 129
+L+E G SR G I VTQPRRVA ++ A RV+ E LGK VG+ VR D +
Sbjct: 110 YLYEGGI------SRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSE 163
Query: 130 SCSIKFMTDGILLRE-----LKALY------EKQQQLLRS----GQCIEPKDR-----VF 169
IKF+TDG+LLRE L Y E ++ + + G + R
Sbjct: 164 DTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKL 223
Query: 170 PLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVM 229
PLK+I+MSAT+ V+ F + F P++ + RQ P+ V ++K+ + DY+ A V
Sbjct: 224 PLKVIVMSATMDVDLF---SQYFNGAPVLYLEGRQHPIQVFYTKQPQN-DYLHAALVSVF 279
Query: 230 SIHKRLPQG-GILVFVTGQREVEYLCSKLRKASKQL 264
IH+ P ILVF+TGQ E+E + R +K L
Sbjct: 280 QIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHL 315
Score = 341 (125.1 bits), Expect = 3.9e-61, Sum P(3) = 3.9e-61
Identities = 77/195 (39%), Positives = 107/195 (54%)
Query: 433 GVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKV 492
G A+ VLPLYA LP A QLRVF+ +G R V++STN+AETS+TI GIKYVVDTG K
Sbjct: 318 GCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKA 377
Query: 493 KKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISK 552
KKYN +G+E +Q +SK CYRLY+ F + EI +
Sbjct: 378 KKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKF-DKMTVPEIQR 436
Query: 553 VPVDGVVLLMKSMNIDKVSNFPF---PTPPEVTALVEAERCLKALEALDSNGRLTALGKA 609
+ V+L + +M + V F F P+P + A + L ALE D LT +G+
Sbjct: 437 CNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRK 496
Query: 610 MAHYPMSPRHSRMLL 624
MA +P+ P+ ++ +L
Sbjct: 497 MAAFPLEPKFAKTIL 511
Score = 46 (21.3 bits), Expect = 3.9e-61, Sum P(3) = 3.9e-61
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
KF + D +T+ + F+ ++C E ++ K M ++++R QL
Sbjct: 551 KFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQL 599
Score = 44 (20.5 bits), Expect = 4.6e-28, Sum P(3) = 4.6e-28
Identities = 34/150 (22%), Positives = 65/150 (43%)
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQ 247
GGR + PP+ + +P V +R+ I QA ++++ + L +L+ TG
Sbjct: 47 GGRR-QQPPLAQPSASPYPEAVELQRRSLP---IFQARGQLLAQLRNL-DNAVLIGETGS 101
Query: 248 REVEYLCSKLRKA--SKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYST 305
+ + L + S+Q ++ ++ + V A S D E+ + + GY+
Sbjct: 102 GKTTQIPQYLYEGGISRQGIIAVTQPRR---VAAISLATRVSDEKRTELGK---LVGYTV 155
Query: 306 EQQTDRFSSYDEDQFDIDDNEL--DALSDS 333
+ D +S D + D L +A+SDS
Sbjct: 156 --RFDDVTSEDTRIKFLTDGMLLREAISDS 183
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 336 (123.3 bits), Expect = 4.9e-61, Sum P(4) = 4.9e-61
Identities = 69/189 (36%), Positives = 108/189 (57%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERL--VVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
+LP+Y+ L Q++VFE V + +++ +++STN+AETS+TI G+ YVVD G K+K Y+
Sbjct: 333 LLPMYSGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYD 392
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
S +G+ES I SK CYRLY+ + +LPD + EI + +
Sbjct: 393 SESGLESLVIVPTSKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLT 452
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLT-ALGKAMAHYPM 615
+L +K++ ID + NF F + P ++L+ L L ALD NG+LT G MA +P
Sbjct: 453 NTILQLKALGIDNILNFDFISQPPSSSLIRGLEVLYGLGALDDNGKLTNPTGMIMAEFPT 512
Query: 616 SPRHSRMLL 624
P S+M++
Sbjct: 513 DPTFSKMII 521
Score = 254 (94.5 bits), Expect = 4.9e-61, Sum P(4) = 4.9e-61
Identities = 55/121 (45%), Positives = 80/121 (66%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R LPI + I+ + S ++I G TGCGK+TQ+PQ+LFE+G+ R+
Sbjct: 48 IQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDG---FRT- 103
Query: 87 RIGVTQPRRVAVLATAKRVAFELG-LHLGKEVGFQVRHDKKIGD-SCSIKFMTDGILLRE 144
I TQPRRVA ++ A+RVA E+G H+GK VG+ VR D+KI D IK++TDG+L+RE
Sbjct: 104 -ILCTQPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIRE 162
Query: 145 L 145
+
Sbjct: 163 M 163
Score = 127 (49.8 bits), Expect = 4.9e-61, Sum P(4) = 4.9e-61
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 171 LKLILMSATLRVEDFIS-------GGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQ 223
LKLI+ SATL DF + + I+ + R +PV +H+ + + +YI
Sbjct: 214 LKLIISSATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEESTS-NYIQT 272
Query: 224 AYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKL 257
+ ++ IH P G ILVF+TGQ E+E L L
Sbjct: 273 TIQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTL 306
Score = 71 (30.1 bits), Expect = 4.9e-61, Sum P(4) = 4.9e-61
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 715 DVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLL 757
D LT+ F ++S ++CN++ ++ K M+ + ++RKQLL
Sbjct: 564 DHLTLLNIFNSFISNQSSPQWCNQHQINYKAMQRVLQVRKQLL 606
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 386 (140.9 bits), Expect = 6.9e-61, Sum P(3) = 6.9e-61
Identities = 95/253 (37%), Positives = 141/253 (55%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
S+ + R+ LP + +++M + DN +I+ GETG GKTTQ+ QFL+E G+G
Sbjct: 291 SQTKSIREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYG---- 346
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
+ G IG TQPRRVA ++ AKRV+ E+ + LG VG+ +R + IK+MTDG+L
Sbjct: 347 --QLGMIGCTQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVL 404
Query: 142 LRE-LKA----------LYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE L + E ++ L + G + R LKLI+ SAT+ + F
Sbjct: 405 LRESLNEPDLDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFS 464
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
F P +P R FPV V FS R+ + DY+ QA ++V++IH + G ILVF+TG
Sbjct: 465 D---FFGGAPDFTIPGRTFPVDVMFS-RSPVEDYVDQAVQQVLNIHVSMGTGDILVFMTG 520
Query: 247 QREVEYLCSKLRK 259
Q ++E C +R+
Sbjct: 521 QEDIEVTCELVRE 533
Score = 291 (107.5 bits), Expect = 6.9e-61, Sum P(3) = 6.9e-61
Identities = 62/188 (32%), Positives = 103/188 (54%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP+Y+ +PA Q ++F+ G R +V+TN+AETSLT+ GI YVVD G K+K YN
Sbjct: 544 LSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYN 603
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+++ +I IS+ +RL++ F + L + EI + +
Sbjct: 604 PKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQTIPEIQRTNLS 663
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
+LL+KS+ + + +F F PP + + L AL ALD+ G +T LG+ M +PM
Sbjct: 664 NTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDLWALGALDNLGDMTDLGRKMNFFPMD 723
Query: 617 PRHSRMLL 624
P +++++
Sbjct: 724 PPLAKLII 731
Score = 74 (31.1 bits), Expect = 6.9e-61, Sum P(3) = 6.9e-61
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
++ +E + + KF P SD LT + ++ + +C+ + LH K++ ++R Q
Sbjct: 759 KERQEESDAAREKFFVPESDHLTFLHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVRDQ 818
Query: 756 LLHLLFNQ 763
LL ++ Q
Sbjct: 819 LLDIMKTQ 826
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 384 (140.2 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 101/258 (39%), Positives = 144/258 (55%)
Query: 23 RPN-EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
R N ++ R+ LP+ Q+++EAV +N +I+ G+TG GKTTQV Q+L EAG+ +N+
Sbjct: 565 RTNMSIKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGW-ANK- 622
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
G IG TQPRRVA ++ AKRVA E+G LG EVG+ +R + IK+MTDG+L
Sbjct: 623 ----GIIGCTQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGML 678
Query: 142 LRELKALYE-KQQQLLRSGQCIE---PKDRVF----------P-LKLILMSATLRVEDFI 186
RE+ + K+ ++ + E D +F P L+LI+ SATL + F
Sbjct: 679 QREVLLDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKF- 737
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
F PI +P R FPV + +SK E DY+ A VM IH P G +L+F+TG
Sbjct: 738 --SEYFYGCPIFSIPGRTFPVEIMYSKEPES-DYLDAALITVMQIHLTEPPGDMLLFLTG 794
Query: 247 QREVEYLCSKLRKASKQL 264
Q E++ C L + K L
Sbjct: 795 QEEIDTACEILYERMKAL 812
Score = 311 (114.5 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 66/194 (34%), Positives = 107/194 (55%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETS+TI I YV+D G K K
Sbjct: 816 VPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNIYYVIDPGFVKQK 875
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
Y+ G++S + IS+ C+RLY+ A + + + + +I +
Sbjct: 876 AYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQ 935
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ +L++K+M I+ + +F F PP ++ A L AL ALD G LT LG+ MA +
Sbjct: 936 NLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYALSALDDEGLLTRLGRKMADF 995
Query: 614 PMSPRHSRMLLTLI 627
PM P +++L+ +
Sbjct: 996 PMEPALAKVLIASV 1009
Score = 58 (25.5 bits), Expect = 1.5e-60, Sum P(3) = 1.5e-60
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQ 755
++ ++ A AKF +P D LT+ ++ S +C E + + + +R+Q
Sbjct: 1034 KEKQQQADQKKAKFHDPHGDHLTLLNVYNAWKRSGFSNAWCYENFIQARQIRRAQDVRQQ 1093
Query: 756 LLHLL 760
LL ++
Sbjct: 1094 LLGIM 1098
Score = 38 (18.4 bits), Expect = 7.2e-24, Sum P(3) = 7.2e-24
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQRE 249
FR PP +E+ ++ + T + D+ G A+ ++ + ++ G LV V+ +E
Sbjct: 259 FRKPPPVELDDSPVLYKIYDGRVTGVKDF-G-AFVNLVGVRGKV-DG--LVHVSAMQE 311
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 336 (123.3 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 76/189 (40%), Positives = 108/189 (57%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
LCVLP+YA LP Q+RVFE + R VVV+TN+AETS+TI G+ +V+D K++ YN
Sbjct: 300 LCVLPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYN 359
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
IES + ISK C+RLY+ F LP+ + E+ + +
Sbjct: 360 PRTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEK-LPESTVPEMQRSNLA 418
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLT-ALGKAMAHYPM 615
V+L +K++ ID V F F +PP ++V+A L AL LD GRLT +G MA +P+
Sbjct: 419 PVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLFALGGLDQYGRLTDPMGVRMAEFPL 478
Query: 616 SPRHSRMLL 624
SP ++MLL
Sbjct: 479 SPMFAKMLL 487
Score = 249 (92.7 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 61/146 (41%), Positives = 85/146 (58%)
Query: 15 APIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEA 74
+PIV + +E R+ LP+ I+ V V+I GETG GK+TQ+PQ+L EA
Sbjct: 25 SPIVFNPHTALTIEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEA 84
Query: 75 GFGSNRCSSRSGR-IGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS- 132
G+ + G+ IGVTQPRRVA + A RVA E G LG EVG+ +R D +
Sbjct: 85 GWAAE------GKVIGVTQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATR 138
Query: 133 IKFMTDGILLRELKA--LYEKQQQLL 156
IKF+TDG+L+RE+ + L +K L+
Sbjct: 139 IKFLTDGMLVREMMSDPLLKKYSVLI 164
Score = 122 (48.0 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 34/101 (33%), Positives = 55/101 (54%)
Query: 171 LKLILMSATL---RVEDFI----SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQ 223
L+LI+ SATL + +DF SG I+ V R FPV + ++ + + DY+
Sbjct: 192 LRLIVASATLDAKKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFYTV-SPVPDYVKA 250
Query: 224 AYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
+ V+ IH+ G +L F+TGQ EVE + S L++ ++ L
Sbjct: 251 TVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTL 291
Score = 74 (31.1 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
K A+ H KF+ D LT+ + F + ++C ++ L+ K + + +R+QL H
Sbjct: 519 KSAAR-EHRKFAVAEGDHLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLRATAVREQLRH 577
Query: 759 LL 760
LL
Sbjct: 578 LL 579
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 391 (142.7 bits), Expect = 2.2e-60, Sum P(2) = 2.2e-60
Identities = 93/254 (36%), Positives = 148/254 (58%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E+ RK+LP+ +++ ++ + +N VI+ GETG GKTTQ+PQF+ +AG R
Sbjct: 69 EILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGL------IRP 122
Query: 86 GR-IGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE 144
G+ +GVTQPRRVA ++ AKRV+ E+ LG+EVG+ +R ++ +K++TDG+LLRE
Sbjct: 123 GKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRE 182
Query: 145 LKA-----------LYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGG 189
+ L E ++ L + G + R LKLI+MSATL F
Sbjct: 183 SMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKF---Q 239
Query: 190 RLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQRE 249
+ F N P+I+VP R PV + +++ DY+ A + V+ IH G ILVF+TG+ E
Sbjct: 240 KYFENAPLIKVPGRLHPVEIFYTEEAA-KDYLESAVRTVIDIHTNEGTGDILVFLTGEEE 298
Query: 250 VEYLCSKLRKASKQ 263
+E C+K+++ +++
Sbjct: 299 IEDTCAKIQRETRE 312
Score = 303 (111.7 bits), Expect = 2.2e-60, Sum P(2) = 2.2e-60
Identities = 69/197 (35%), Positives = 104/197 (52%)
Query: 428 DNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDT 487
+ + G+ + LPLY+ LP Q ++F+ KE R +VSTN+AETSLTI GI +VVD
Sbjct: 309 ETRERGLPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLTIDGIVFVVDP 366
Query: 488 GREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSC 547
G K K YN + +ES + ISK C+RLY+ F ++ +
Sbjct: 367 GFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTH 426
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALG 607
EI + + VVL + + + + +F F PP L+ A L L ALD G+LT +G
Sbjct: 427 PEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIG 486
Query: 608 KAMAHYPMSPRHSRMLL 624
M+ +P+ P+ S+ML+
Sbjct: 487 SIMSEFPLDPQLSKMLI 503
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 389 (142.0 bits), Expect = 3.3e-60, Sum P(3) = 3.3e-60
Identities = 101/258 (39%), Positives = 147/258 (56%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
++ + R+ LPI ++QE++ + DNS VI+ GETG GKTTQ+ Q+L E G+
Sbjct: 520 AKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY----- 574
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
+ G IG TQPRRVA ++ AKRV+ E+G +LG+EVG+ +R + +S IK+MTDGIL
Sbjct: 575 -TDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGIL 633
Query: 142 LRE-LKAL----Y------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE L+ Y E ++ L + G E R LKLI+ SAT+ E F
Sbjct: 634 LRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFA 693
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
S F N PI +P R FPV + FSK T DY+ A K+ + +H G IL+F+ G
Sbjct: 694 S---FFGNVPIFHIPGRTFPVDILFSK-TPQEDYVEAAVKQSLQVHLSGAPGDILIFMPG 749
Query: 247 QREVEYLCSKLRKASKQL 264
Q ++E ++ + ++L
Sbjct: 750 QEDIEVTSDQIVEHLEEL 767
Score = 291 (107.5 bits), Expect = 3.3e-60, Sum P(3) = 3.3e-60
Identities = 71/215 (33%), Positives = 112/215 (52%)
Query: 410 PTPEQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVST 469
P E S VE + + + A AL VLP+Y+ LP+ Q ++F+ +G R +V+T
Sbjct: 748 PGQEDIEVTSDQIVEHLEELENAP--ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT 805
Query: 470 NVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHC 529
N+AETSLT+ GI +V+D+G K+K + + G +I I K C
Sbjct: 806 NIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP-RC 864
Query: 530 YRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAER 589
RLY+ + + N L + EI + + VVLL+KS+ + + F F PP ++ +
Sbjct: 865 CRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMY 924
Query: 590 CLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
L L ALD+ G LT+ G+ M +P+ P S+ML+
Sbjct: 925 QLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI 959
Score = 69 (29.3 bits), Expect = 3.3e-60, Sum P(3) = 3.3e-60
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
KF+ P SD L+ ++ + +CN++ +H K M ++ ++R QL ++ Q
Sbjct: 999 KFAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQ 1054
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 355 (130.0 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 97/280 (34%), Positives = 152/280 (54%)
Query: 25 NEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSR 84
+++++ ++ LP+ +++ + +N V+I GETG GKTTQ+ Q+L+E G+ ++R S
Sbjct: 341 DDIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKS- 399
Query: 85 SGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS-IKFMTDGILLR 143
I VTQPRRVA ++ AKRVA E+ + LGKEVG+ +R + C+ +KF+TDGILLR
Sbjct: 400 ---IVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLR 456
Query: 144 E--------------LKALYEKQQQ---LLRSGQCIEPKDRVFPLKLILMSATLRVEDFI 186
E + +E+ LL + + + R LKLI+ SAT+ + F
Sbjct: 457 ETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRR--DLKLIITSATMNAKKFS 514
Query: 187 SGGRLFRNPPIIEVPTRQFPV-TVHFSKRTEIVDYIGQAYKKVMSIH--KRLPQGGILVF 243
+ F N P +P R FPV T++ S + DY+ A + + IH G IL+F
Sbjct: 515 A---FFGNAPQFTIPGRTFPVQTIYTSNPVQ--DYVEAAVSQAVKIHLANDCSSGDILIF 569
Query: 244 VTGQREVEYLCSKLRKASKQLLVNSSKENKGN-QVVADSE 282
+TGQ ++E L++ K L V S K N + + D E
Sbjct: 570 MTGQEDIETTFDTLQE--KFLQVYSKKFGTANFEEINDIE 607
Score = 320 (117.7 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 69/206 (33%), Positives = 116/206 (56%)
Query: 424 EKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKY 483
+K G + + +LP+Y+ LPA Q ++F+D+ +R ++++TN+AETSLTI GI+Y
Sbjct: 593 KKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRY 652
Query: 484 VVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILP 543
V+D G K+K YN G++S I ISK YRLY+ F +
Sbjct: 653 VIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMY 712
Query: 544 DFSCAEISKVPVDGVVLLMKSMNI-DKVSNFPFPTPPEVTALVEAERCLKALEALDSNGR 602
+ EI + + +LL+KS+++ D++S FPF P + + + L + A+D++G+
Sbjct: 713 LQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQ 772
Query: 603 LTALGKAMAHYPMSPRHSRMLLTLIQ 628
LT LG MA +P+ P S++LL ++
Sbjct: 773 LTPLGLQMAKFPLQPSLSKILLIAVR 798
Score = 69 (29.3 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 695 KRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRK 754
K + KE A ++ KF SD LT+ + + + +CN++ + K++ +R
Sbjct: 822 KERQKE-ADIARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRD 880
Query: 755 QLLHLLFNQ 763
QLL +L +Q
Sbjct: 881 QLLTILKSQ 889
Score = 39 (18.8 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 319 QFDIDDNELDALSDSETESE 338
Q D+DDNE D L DS + +
Sbjct: 96 QLDLDDNE-DEL-DSPVQKK 113
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 383 (139.9 bits), Expect = 3.0e-59, Sum P(2) = 3.0e-59
Identities = 94/272 (34%), Positives = 153/272 (56%)
Query: 8 SLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQV 67
S + P+ + V +E++RK LP+ + ++++A+N+ ++I ETG GKTTQ+
Sbjct: 392 SAENPVDTDKMTDVKVEKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQL 451
Query: 68 PQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI 127
PQFL EAG+ + + +I TQPRRVA ++ A RVA E+ + LG+EVG+ +R +
Sbjct: 452 PQFLHEAGY-----TKGNKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENAT 506
Query: 128 GDSCSIKFMTDGILLRELK-----ALY------EKQQQLLRSGQCIE-PKD--RVFP-LK 172
+ IK++TDG+LLRE A Y E ++ L + KD R P LK
Sbjct: 507 SEKTVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLK 566
Query: 173 LILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIH 232
+++ SAT+ E F + F P+ VP R++PV ++++ + E +YI A ++ IH
Sbjct: 567 VLISSATIDAEKFSA---YFDEAPVFYVPGRRYPVDIYYTPQPE-ANYIQAAITTILQIH 622
Query: 233 KRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
P G ILVF+TGQ E+E + +++ + L
Sbjct: 623 TTQPAGDILVFLTGQDEIELMSENMQELCRIL 654
Score = 309 (113.8 bits), Expect = 3.0e-59, Sum P(2) = 3.0e-59
Identities = 68/208 (32%), Positives = 111/208 (53%)
Query: 417 ELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSL 476
EL S +++++ + + + P+YA LP+ Q ++F+ G R VV++TN+AETS+
Sbjct: 641 ELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSI 700
Query: 477 TIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSA 536
TI G+ +V+D+G K YN G+ES S+ C+RLY+
Sbjct: 701 TIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRR 760
Query: 537 VFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEA 596
+NN L + EI + + +VLL+KS+ I+ + +F F P L+ + L AL A
Sbjct: 761 TYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGA 820
Query: 597 LDSNGRLTALGKAMAHYPMSPRHSRMLL 624
L++ G LT LG+ MA +P P S+ L+
Sbjct: 821 LNNRGELTKLGRQMAEFPTDPMLSKSLI 848
Score = 62 (26.9 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 38/144 (26%), Positives = 65/144 (45%)
Query: 260 ASKQLLVN-SSKENKGNQVVADSEPNATK-DINMKEINEAFEIQGYSTEQQTDRFSSY-- 315
+S LL+ S E G + S K +I ++ +E E + E+ D +S+
Sbjct: 95 SSYDLLIEPQSHETPGKPLKKKSRSKTPKREIARRQRDED-EWESDEYEEVVDGSASHPI 153
Query: 316 DEDQF--DIDDNELDALSDSETESETEILGEDEKLVEQKCPMDGDDPVDVLKENWSLGSL 373
+ED D +++ + SD ETE + L E E+ E+ D + + E++S
Sbjct: 154 EEDSVSTDFQNHDYEKSSDPETERLND-LREREEFEERLRRKDLEAATNEFVEDYSS--- 209
Query: 374 KLAFEVLS-GKNASGPSSQMKLST 396
K + E L+ K A P S KL++
Sbjct: 210 KFSSEELALRKLADDPESWRKLAS 233
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 362 (132.5 bits), Expect = 5.5e-59, Sum P(3) = 5.5e-59
Identities = 95/262 (36%), Positives = 139/262 (53%)
Query: 24 PNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSS 83
P + R++LPI ++ + ++ GETG GKTTQ+PQ+L+EAG G
Sbjct: 14 PPPAASQRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIG------ 67
Query: 84 RSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLR 143
R G I VTQPRRVA ++ A RV+ E LGK VG+ VR D D IKF+TDG+LLR
Sbjct: 68 RQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLR 127
Query: 144 E------LKA-----LYEKQQQLLRSG------QCIEPKDRVF---PLKLILMSATLRVE 183
E L+ L E ++ + + + + K + PLK+I+MSAT+ V+
Sbjct: 128 EAIGDPILRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVD 187
Query: 184 DFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQG-GILV 242
F + F P++ + RQ P+ V ++K+ + DY+ A V IH+ P ILV
Sbjct: 188 QF---SQYFNGAPVLYLEGRQHPIQVFYTKQPQS-DYLQAALVSVFQIHQEAPSSQDILV 243
Query: 243 FVTGQREVEYLCSKLRKASKQL 264
F+TGQ E+E + R +K L
Sbjct: 244 FLTGQEEIEAMTKTCRDIAKHL 265
Score = 310 (114.2 bits), Expect = 5.5e-59, Sum P(3) = 5.5e-59
Identities = 73/199 (36%), Positives = 107/199 (53%)
Query: 433 GVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKV 492
G + V+PLYA LP + QLRVF+ +G R V++STN+AETS+TI GIKYVVDTG K
Sbjct: 268 GCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNIAETSITISGIKYVVDTGMVKA 327
Query: 493 KKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNI----LPDFSCA 548
KKYN G+E +Q +SK CYRLY+ F +P+
Sbjct: 328 KKYNPEIGLEVLAVQRVSKAQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQ-- 385
Query: 549 EISKVPVDGVVLLMKSMNIDKVSNFPF---PTPPEVTALVEAERCLKALEALDSNGRLTA 605
+ + + V+L + ++ I + F F P+P + A +E L A+E + LT
Sbjct: 386 SLCRCNLASVLLQLLALRIPNILTFDFMSKPSPDAIQAAIEQLDLLGAVEQKEDQLVLTP 445
Query: 606 LGKAMAHYPMSPRHSRMLL 624
LG+ MA +P+ P+ S+ +L
Sbjct: 446 LGRKMAAFPLEPKFSKTIL 464
Score = 50 (22.7 bits), Expect = 5.5e-59, Sum P(3) = 5.5e-59
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
KF + D LT+ + F+ E+C E ++ + M +S +R QL
Sbjct: 504 KFISSEGDHLTLLNVYRAFKNVSGNKEWCKENFVNGRNMMLVSDVRAQL 552
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 330 (121.2 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58
Identities = 79/214 (36%), Positives = 118/214 (55%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGA-LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNV 471
E+ + S +E+ R G+ L VLP+YA LP+ Q++VFE V R V+V+TNV
Sbjct: 285 EEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNV 344
Query: 472 AETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYR 531
AETS+TI GI YV+D G K++ YN IE + +S+ CYR
Sbjct: 345 AETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYR 404
Query: 532 LYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCL 591
LY+ F+ LP + E+ + + V+L +K++ ID V F F +PP ++V+A L
Sbjct: 405 LYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELL 463
Query: 592 KALEALDSNGRLTA-LGKAMAHYPMSPRHSRMLL 624
AL LD + RLT LG +A +P++P ++MLL
Sbjct: 464 YALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLL 497
Score = 253 (94.1 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58
Identities = 55/121 (45%), Positives = 77/121 (63%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+E R+ LP+ + I+ + + V+I GETGCGK+TQ+PQ+L EAG+ + G
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGW------TAEG 100
Query: 87 RI-GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS-IKFMTDGILLRE 144
R+ GVTQPRRVA + A RVA E G LG EVG+ +R D + IKF+TDG+L+RE
Sbjct: 101 RVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVRE 160
Query: 145 L 145
+
Sbjct: 161 M 161
Score = 117 (46.2 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 171 LKLILMSATL---RVEDFISGGRLFRNPP-----IIEVPTRQFPVTVHFSKRTEIVDYIG 222
L+LI+ SATL + DF + +P I+ V R FPV + F ++ + DYI
Sbjct: 202 LRLIVASATLDADKFRDFFNQNET-SDPARDTCVILTVEGRTFPVDI-FYLQSPVPDYIK 259
Query: 223 QAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKEN 272
+ V+ IH+ G +L F+TGQ EVE + S L + ++ L K +
Sbjct: 260 STVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRH 309
Score = 64 (27.6 bits), Expect = 1.1e-58, Sum P(4) = 1.1e-58
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 706 HAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
H KF+ D LT+ + F ++C E+ L+ K + + +R+QL LL
Sbjct: 535 HRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLL 589
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 330 (121.2 bits), Expect = 1.6e-58, Sum P(4) = 1.6e-58
Identities = 79/214 (36%), Positives = 118/214 (55%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGA-LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNV 471
E+ + S +E+ R G+ L VLP+YA LP+ Q++VFE V R V+V+TNV
Sbjct: 285 EEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNV 344
Query: 472 AETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYR 531
AETS+TI GI YV+D G K++ YN IE + +S+ CYR
Sbjct: 345 AETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYR 404
Query: 532 LYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCL 591
LY+ F+ LP + E+ + + V+L +K++ ID V F F +PP ++V+A L
Sbjct: 405 LYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELL 463
Query: 592 KALEALDSNGRLTA-LGKAMAHYPMSPRHSRMLL 624
AL LD + RLT LG +A +P++P ++MLL
Sbjct: 464 YALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLL 497
Score = 253 (94.1 bits), Expect = 1.6e-58, Sum P(4) = 1.6e-58
Identities = 55/121 (45%), Positives = 77/121 (63%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+E R+ LP+ + I+ + + V+I GETGCGK+TQ+PQ+L EAG+ + G
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGW------TAEG 100
Query: 87 RI-GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS-IKFMTDGILLRE 144
R+ GVTQPRRVA + A RVA E G LG EVG+ +R D + IKF+TDG+L+RE
Sbjct: 101 RVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVRE 160
Query: 145 L 145
+
Sbjct: 161 M 161
Score = 117 (46.2 bits), Expect = 1.6e-58, Sum P(4) = 1.6e-58
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 171 LKLILMSATL---RVEDFISGGRLFRNPP-----IIEVPTRQFPVTVHFSKRTEIVDYIG 222
L+LI+ SATL + DF + +P I+ V R FPV + F ++ + DYI
Sbjct: 202 LRLIVASATLDADKFRDFFNQNET-SDPARDTCVILTVEGRTFPVDI-FYLQSPVPDYIK 259
Query: 223 QAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKEN 272
+ V+ IH+ G +L F+TGQ EVE + S L + ++ L K +
Sbjct: 260 STVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRH 309
Score = 64 (27.6 bits), Expect = 1.6e-58, Sum P(4) = 1.6e-58
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 706 HAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
H KF+ D LT+ + F ++C E+ L+ K + + +R+QL LL
Sbjct: 535 HRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLL 589
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 340 (124.7 bits), Expect = 2.1e-58, Sum P(3) = 2.1e-58
Identities = 76/195 (38%), Positives = 107/195 (54%)
Query: 433 GVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKV 492
G ++ VLPLYA LP + QLRVF+ +G R V++STN+AETS+TI GIKYVVDTG K
Sbjct: 309 GCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKA 368
Query: 493 KKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISK 552
KKYN +G+E +Q +SK CYRLY+ F + EI +
Sbjct: 369 KKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKF-EKMTVPEIQR 427
Query: 553 VPVDGVVLLMKSMNIDKVSNFPF---PTPPEVTALVEAERCLKALEALDSNGRLTALGKA 609
+ V+L + +M + V F F P+P + A + L ALE D LT +G+
Sbjct: 428 CNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRK 487
Query: 610 MAHYPMSPRHSRMLL 624
MA +P+ PR ++ +L
Sbjct: 488 MAAFPLEPRFAKTIL 502
Score = 338 (124.0 bits), Expect = 2.1e-58, Sum P(3) = 2.1e-58
Identities = 95/274 (34%), Positives = 142/274 (51%)
Query: 12 PLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFL 71
PLA P E++ R+ LPI +++ + + ++ GETG GKTTQ+PQ+L
Sbjct: 45 PLAQPSASPYREALELQ--RRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYL 102
Query: 72 FEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSC 131
+E G SR G I VTQPRRVA ++ A RV+ E LGK VG+ VR + +
Sbjct: 103 YEGGI------SRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDT 156
Query: 132 SIKFMTDGILLRE-----LKALY------EKQQQLLRS----GQCIEPKDR-----VFPL 171
IKF+TDG+LLRE L Y E ++ + + G + R PL
Sbjct: 157 RIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPL 216
Query: 172 KLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSI 231
K+I+MSAT+ V+ F + F P++ + RQ P+ + ++K+ + DY+ A V I
Sbjct: 217 KVIVMSATMDVDLF---SQYFNRAPVLYLEGRQHPIQIFYTKQPQ-QDYLHAALVSVFQI 272
Query: 232 HKRLPQG-GILVFVTGQREVEYLCSKLRKASKQL 264
H+ P ILVF+TGQ E+E + R ++ L
Sbjct: 273 HQEAPASQDILVFLTGQEEIEAMSKTCRDIARHL 306
Score = 44 (20.5 bits), Expect = 2.1e-58, Sum P(3) = 2.1e-58
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
KF + D +T+ + F+ ++C E ++ K M ++++R QL
Sbjct: 542 KFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQL 590
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 318 (117.0 bits), Expect = 7.7e-58, Sum P(4) = 7.7e-58
Identities = 68/189 (35%), Positives = 103/189 (54%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L V+P Y LPA Q++ F+ G R VVV+TN+AE S+TIPGI YV+DTG K++ +
Sbjct: 329 LWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQH 388
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+ANG+E+ +SK CYRLY + F + + EI + +
Sbjct: 389 AANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEFERFA-EGTVPEIQRCQMA 447
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA-LGKAMAHYPM 615
+L +K++ + V F + +PP A++ L AL A+D +LT+ LG MA +P+
Sbjct: 448 STILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPL 507
Query: 616 SPRHSRMLL 624
P HS+ LL
Sbjct: 508 PPMHSKCLL 516
Score = 246 (91.7 bits), Expect = 7.7e-58, Sum P(4) = 7.7e-58
Identities = 62/140 (44%), Positives = 80/140 (57%)
Query: 12 PLAAPIVVHVSRPN---EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVP 68
P+ + VH + P ++ R LPI I+ +II GETGCGK+TQVP
Sbjct: 53 PIEEQLKVH-NNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVP 111
Query: 69 QFLFEAGFGSNRCSSRSGR-IGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI 127
QFL EAG+ ++ GR I +TQPRRVAV+ A RVA E LG +VG+ VR D
Sbjct: 112 QFLLEAGWAAD------GRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVS 165
Query: 128 GDSCSIKFMTDGILLRELKA 147
+KFMTDG+LLRE+ A
Sbjct: 166 DKDTKVKFMTDGLLLREILA 185
Score = 151 (58.2 bits), Expect = 7.7e-58, Sum P(4) = 7.7e-58
Identities = 43/101 (42%), Positives = 55/101 (54%)
Query: 171 LKLILMSATLRVE---DFI----SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQ 223
L++I+ SATL E DF +G II V R PV VH +K T + DY
Sbjct: 224 LRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTK-TSVPDYCQS 282
Query: 224 AYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
A V++IHK G ILVF+TGQ EVE +C KLR+ + L
Sbjct: 283 AVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNL 323
Score = 46 (21.3 bits), Expect = 7.7e-58, Sum P(4) = 7.7e-58
Identities = 12/59 (20%), Positives = 28/59 (47%)
Query: 702 AKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
A + KF+ D +T+ F + ++C+++ ++ + + +R QL+ LL
Sbjct: 550 ADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLL 608
>GENEDB_PFALCIPARUM|MAL13P1.14 [details] [associations]
symbol:MAL13P1.14 "ATP-dependent DEAD box
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 421 (153.3 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 132/464 (28%), Positives = 225/464 (48%)
Query: 165 KDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQA 224
K + P+K+I+MSAT+ + ++F+N + +PT++ V HF T DY+ +A
Sbjct: 608 KSDIIPIKIIIMSATINDNNLFQN-KIFQNFTTVNIPTQKVQVIDHFLSYTP-KDYVEEA 665
Query: 225 YKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPN 284
+K++ IHK+LPQG ILVF+T Q E+ L + L S + NS +G + D
Sbjct: 666 KRKIIQIHKKLPQGSILVFLTSQEEIYRLYNML---SNLKITNSEFNQQGENKIMDEVNF 722
Query: 285 ATKDINMKEINEAFEIQGY--STEQQTDR---FS-SYDEDQFDIDDNELDALSDSETESE 338
D++ E N+ ++ + T++ ++ F S +E+ + D E D + +S+ E
Sbjct: 723 DIFDLSEGEQNKDEKVSLFFRETDENEEKKILFDVSEEENSVESDIKESD-IKESDYIKE 781
Query: 339 TEILGEDEKLVEQKCPMDGDDPVDVLKENWSLGSLKLAFEVLSGKNASGPSSQMKLSTPA 398
+I E + + E D ++ + + +K + +V K + S +K S
Sbjct: 782 GDIK-ESDYIKESNIEESNIDESNIEESDIEESDVKES-DV---KESDIKESDIKESDND 836
Query: 399 IPEQCTELPPTPTPEQCPELSSPDVEKMGDN--KRA-------GVGALCVLPLYAMLPAA 449
+ ++ EL + P+ S+ + ++ +N K++ G G L V LY+ LP
Sbjct: 837 VYDK--ELHDDDHMDDEPKKSNINTYELNNNTKKKSSIWKGSDGSGTLKVFKLYSKLPMK 894
Query: 450 AQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWI 509
Q+ +F + KE ER+ ++STN+AETSLT+P I+YV+D G+EK K Y++ N Y I I
Sbjct: 895 DQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEKRKIYSNLNDYSYYIIDNI 954
Query: 510 SKXXXXXXXXXXXXXXXX----------------HCYRLYSSAVFNNILPDFSCAEISKV 553
SK H Y+LYSS +N + + I
Sbjct: 955 SKCSAIQRKGRAGRILYLLKKNKKNKKKMENEKGHVYKLYSSNYYNYFFKNDNDYPILNY 1014
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEAL 597
P+D ++L + S NI V NFPF P+ + +EA++ L L +
Sbjct: 1015 PLDSLILYLLSFNIKNVENFPFINKPDKSKFIEAKKRLIYLNCI 1058
Score = 240 (89.5 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 56/128 (43%), Positives = 80/128 (62%)
Query: 19 VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGS 78
V V+R ++ R LP++ EQE++EAV + V + G+TGCGK+TQVPQFL+E GF S
Sbjct: 443 VQVNRKEHIDKVRASLPVLDYEQELIEAVLNYDVVFVNGDTGCGKSTQVPQFLYEYGFTS 502
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS-IKFMT 137
N IG+TQPR++AV + R+ EL + G+Q+R +K S IK MT
Sbjct: 503 NDYF-----IGITQPRKIAVKSICNRLNDELNEEI---CGYQIRFEKSYFLKHSKIKVMT 554
Query: 138 DGILLREL 145
+GILL+E+
Sbjct: 555 EGILLKEI 562
Score = 64 (27.6 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 665 TQTNSNDSELEERDNALDSEDPMCRQEKLG--KRKLK-EVAKLSHAKFSNPTSDVLTVAY 721
T T+S+D + ++ +N L S + +E + K + +V + +F N D+L
Sbjct: 1205 TYTSSDDDD-DDDNNTLSSSNNDMSEEHIHHIKNNINVDVLENFKEQFDN---DILFYLN 1260
Query: 722 ALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
F SK E C L K M E+ KL L+ ++
Sbjct: 1261 ICTKFYFSKDRNETCQIMHLDKKKMNELLKLSNHLIKII 1299
Score = 43 (20.2 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 588 ERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLLTL-IQTMKVK 633
E +K + G +T G + P+S R++++L + ++++ +K
Sbjct: 1083 ENHIKKFNPYNKKGGITLTGSFILLLPISTRYAKILTDVCLKSLAMK 1129
>UNIPROTKB|Q8IET8 [details] [associations]
symbol:MAL13P1.14 "ATP dependent DEAD-box helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 421 (153.3 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 132/464 (28%), Positives = 225/464 (48%)
Query: 165 KDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQA 224
K + P+K+I+MSAT+ + ++F+N + +PT++ V HF T DY+ +A
Sbjct: 608 KSDIIPIKIIIMSATINDNNLFQN-KIFQNFTTVNIPTQKVQVIDHFLSYTP-KDYVEEA 665
Query: 225 YKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPN 284
+K++ IHK+LPQG ILVF+T Q E+ L + L S + NS +G + D
Sbjct: 666 KRKIIQIHKKLPQGSILVFLTSQEEIYRLYNML---SNLKITNSEFNQQGENKIMDEVNF 722
Query: 285 ATKDINMKEINEAFEIQGY--STEQQTDR---FS-SYDEDQFDIDDNELDALSDSETESE 338
D++ E N+ ++ + T++ ++ F S +E+ + D E D + +S+ E
Sbjct: 723 DIFDLSEGEQNKDEKVSLFFRETDENEEKKILFDVSEEENSVESDIKESD-IKESDYIKE 781
Query: 339 TEILGEDEKLVEQKCPMDGDDPVDVLKENWSLGSLKLAFEVLSGKNASGPSSQMKLSTPA 398
+I E + + E D ++ + + +K + +V K + S +K S
Sbjct: 782 GDIK-ESDYIKESNIEESNIDESNIEESDIEESDVKES-DV---KESDIKESDIKESDND 836
Query: 399 IPEQCTELPPTPTPEQCPELSSPDVEKMGDN--KRA-------GVGALCVLPLYAMLPAA 449
+ ++ EL + P+ S+ + ++ +N K++ G G L V LY+ LP
Sbjct: 837 VYDK--ELHDDDHMDDEPKKSNINTYELNNNTKKKSSIWKGSDGSGTLKVFKLYSKLPMK 894
Query: 450 AQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWI 509
Q+ +F + KE ER+ ++STN+AETSLT+P I+YV+D G+EK K Y++ N Y I I
Sbjct: 895 DQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEKRKIYSNLNDYSYYIIDNI 954
Query: 510 SKXXXXXXXXXXXXXXXX----------------HCYRLYSSAVFNNILPDFSCAEISKV 553
SK H Y+LYSS +N + + I
Sbjct: 955 SKCSAIQRKGRAGRILYLLKKNKKNKKKMENEKGHVYKLYSSNYYNYFFKNDNDYPILNY 1014
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEAL 597
P+D ++L + S NI V NFPF P+ + +EA++ L L +
Sbjct: 1015 PLDSLILYLLSFNIKNVENFPFINKPDKSKFIEAKKRLIYLNCI 1058
Score = 240 (89.5 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 56/128 (43%), Positives = 80/128 (62%)
Query: 19 VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGS 78
V V+R ++ R LP++ EQE++EAV + V + G+TGCGK+TQVPQFL+E GF S
Sbjct: 443 VQVNRKEHIDKVRASLPVLDYEQELIEAVLNYDVVFVNGDTGCGKSTQVPQFLYEYGFTS 502
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS-IKFMT 137
N IG+TQPR++AV + R+ EL + G+Q+R +K S IK MT
Sbjct: 503 NDYF-----IGITQPRKIAVKSICNRLNDELNEEI---CGYQIRFEKSYFLKHSKIKVMT 554
Query: 138 DGILLREL 145
+GILL+E+
Sbjct: 555 EGILLKEI 562
Score = 64 (27.6 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 665 TQTNSNDSELEERDNALDSEDPMCRQEKLG--KRKLK-EVAKLSHAKFSNPTSDVLTVAY 721
T T+S+D + ++ +N L S + +E + K + +V + +F N D+L
Sbjct: 1205 TYTSSDDDD-DDDNNTLSSSNNDMSEEHIHHIKNNINVDVLENFKEQFDN---DILFYLN 1260
Query: 722 ALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
F SK E C L K M E+ KL L+ ++
Sbjct: 1261 ICTKFYFSKDRNETCQIMHLDKKKMNELLKLSNHLIKII 1299
Score = 43 (20.2 bits), Expect = 1.3e-57, Sum P(4) = 1.3e-57
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 588 ERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLLTL-IQTMKVK 633
E +K + G +T G + P+S R++++L + ++++ +K
Sbjct: 1083 ENHIKKFNPYNKKGGITLTGSFILLLPISTRYAKILTDVCLKSLAMK 1129
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 354 (129.7 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 87/255 (34%), Positives = 142/255 (55%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
++ R++LP+ +E ++ ++N ++ GETG GKTTQ+PQF+ +
Sbjct: 67 KILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLY----DELPHLTN 122
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+I TQPRRVA ++ AKRVA E+ + LG+EVG+ +R + G + +K+MTDG+LLRE
Sbjct: 123 TQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREA 182
Query: 146 KA-----------LYEKQQQLLRSGQCIEPKDRVF---P-LKLILMSATLRVEDFISGGR 190
L E ++ L + + R+ P LK+I+MSATL + F +
Sbjct: 183 MTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKF---QK 239
Query: 191 LFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREV 250
F + P++ VP R +PV +++++ E DY+ A + V+ IH G ILVF+TG+ E+
Sbjct: 240 YFFDAPLLAVPGRTYPVEIYYTQEPER-DYLEAALRTVLQIHVEEGPGDILVFLTGEEEI 298
Query: 251 EYLCSKLRKASKQLL 265
E C K+ + L+
Sbjct: 299 EDACRKITLEADDLV 313
Score = 303 (111.7 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 75/200 (37%), Positives = 100/200 (50%)
Query: 430 KRAGVGALCVLPLYAMLPAAAQLRVFE----DVKEGE-RLVVVSTNVAETSLTIPGIKYV 484
+ G L V PLY LP Q R+FE D K G R VV+STN+AETSLTI GI YV
Sbjct: 314 REGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYV 373
Query: 485 VDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPD 544
VD G K K YN +ES + ISK C+RLY+ F L +
Sbjct: 374 VDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKELIE 433
Query: 545 FSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLT 604
+ EI + + VL +K + ID + +F + PP ++ A L L LD NG LT
Sbjct: 434 QTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDNGDLT 493
Query: 605 ALGKAMAHYPMSPRHSRMLL 624
LG+ + +P+ P + ML+
Sbjct: 494 PLGRKASEFPLDPNLAVMLI 513
Score = 57 (25.1 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 13/65 (20%), Positives = 30/65 (46%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
+++A +F++P D LT+ ++ + ++C + L + + +RKQL
Sbjct: 544 RKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRR 603
Query: 759 LLFNQ 763
+ Q
Sbjct: 604 TMERQ 608
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 282 (104.3 bits), Expect = 6.5e-57, Sum P(4) = 6.5e-57
Identities = 63/189 (33%), Positives = 98/189 (51%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
+ L +LPLY + Q R+F +G R VVSTN+A TSLTI G++YVVD+G K
Sbjct: 259 IEGLLILPLYGSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQL 318
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
+N G++ E+ ISK YRLYS+ + +PD + EI +
Sbjct: 319 NHNPRVGLDILEVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRT 378
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSN--GRLTALGKAMA 611
+ V+L +K +++ V FP+ PE ++EA + L +A+D G +T LG+ +
Sbjct: 379 SLTSVILTLKCLSVHDVIRFPYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLV 438
Query: 612 HYPMSPRHS 620
+P+ P S
Sbjct: 439 QFPLPPNLS 447
Score = 254 (94.5 bits), Expect = 6.5e-57, Sum P(4) = 6.5e-57
Identities = 54/114 (47%), Positives = 76/114 (66%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LPI + ++ AV++ +I+ GETG GK+TQ+P++L+EAG + G IGVTQP
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQH------GAIGVTQP 54
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA 147
RRVA ++ A+RVA E+G LG VG+QVR D + +IK+MTDG LLR + A
Sbjct: 55 RRVATISVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILA 108
Score = 144 (55.7 bits), Expect = 6.5e-57, Sum P(4) = 6.5e-57
Identities = 39/107 (36%), Positives = 59/107 (55%)
Query: 163 EPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHF----SKR-TEI 217
+P R +K+++MSATL V D +S F + ++ +P R +PV F S R T
Sbjct: 145 KPPGRKTEMKVVVMSATLEV-DKLS--EFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGS 201
Query: 218 VDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
Y+ +A K + IH P+G ILVF+TGQ E+E C L K ++ +
Sbjct: 202 SAYVTEAVKVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESI 248
Score = 77 (32.2 bits), Expect = 6.5e-57, Sum P(4) = 6.5e-57
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVLTVAYALQCFE---LSKSPVEFCNEYALHLKTMEEMSKL 752
+K KE A+L H + S+ A L FE SKSP +C++Y +H + ++ +
Sbjct: 482 QKQKE-AELQHQELSSQVGGCNDFATLLNIFEQCKASKSPSAWCHKYWIHWRAVKSALSV 540
Query: 753 RKQL 756
KQL
Sbjct: 541 EKQL 544
Score = 41 (19.5 bits), Expect = 1.2e-31, Sum P(4) = 1.2e-31
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 528 HCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEA 587
H RL V + P+ SCA I +D +L+ + V N F P + EA
Sbjct: 429 HVTRLGEFLVQFPLPPNLSCAVIKAASLDCEDMLLPIAAMLSVENV-FIRPGDPQKQKEA 487
Query: 588 E 588
E
Sbjct: 488 E 488
Score = 37 (18.1 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 558 VVLLMKSMNIDKVSNF 573
VV++ ++ +DK+S F
Sbjct: 155 VVVMSATLEVDKLSEF 170
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 362 (132.5 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
Identities = 92/252 (36%), Positives = 144/252 (57%)
Query: 33 DLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQ 92
+LPI+ E++I+E V NS V+I GETG GK+TQ+ Q L G+ ++SG I +TQ
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGY------TKSGVIAITQ 56
Query: 93 PRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA----- 147
PRRVA ++ A+RVA EL + LG++VG+ +R + + IK++TDG+LLRE +
Sbjct: 57 PRRVAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLD 116
Query: 148 ------LYEKQQQLLRSGQCIEPKDRVFPL-----KLILMSATLRVEDFISGGRLFRNPP 196
L E ++ L + + R+ + K+++ SATL E +S F P
Sbjct: 117 DYSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEK-VS--EFFSGCP 173
Query: 197 IIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSK 256
++ VP + +PV + +SK V YI + K + IH R P+G IL+F+TGQ ++E L S+
Sbjct: 174 VLNVPGKLYPVEILYSKERP-VSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSR 232
Query: 257 LRKASKQLLVNS 268
L + + L S
Sbjct: 233 LEEKVRSLAEGS 244
Score = 300 (110.7 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
Identities = 66/193 (34%), Positives = 105/193 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+ PL+ LP Q+RVF R +VSTN+AETSLT+ G+ YV+D+G K ++YN +
Sbjct: 250 IYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPS 309
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+G+ S ++ ISK CYRLY AV+ + D + EI + + G
Sbjct: 310 SGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGS 369
Query: 559 VLLMKSMNIDKVS--NFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VL +KS+++ + F F P +L +A + L ++A+D NG +T +G+ M+ P+
Sbjct: 370 VLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLE 429
Query: 617 PRHSRMLLTLIQT 629
P SR L+ +T
Sbjct: 430 PSLSRTLIEANET 442
Score = 40 (19.1 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 723 LQCFE----LSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
LQ FE + PV +C E + ++ M + +R+QL ++
Sbjct: 494 LQIFESWDRTNYDPV-WCKENGMQVRGMVFVKDVRRQLCQIM 534
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 328 (120.5 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 87/253 (34%), Positives = 136/253 (53%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGR--- 87
R LP+ +++ ME + +N + + GETG GKTTQ+PQ+ E + G+
Sbjct: 73 RSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEF-MKQQQQGQPPGQARL 131
Query: 88 IGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL-- 145
+ TQPRRVA ++ A RVA E+ + LG+EVG+ +R + I + +K+ TDG+LLRE
Sbjct: 132 VACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMN 191
Query: 146 KALYEKQQQLL------RS-------GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLF 192
L +K + L+ R+ G E +K+++MSATL F R F
Sbjct: 192 SPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKF---QRYF 248
Query: 193 RNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVFVTGQREVE 251
+ P++ VP R FPV + F+ E DY+ A + V+ IH +G IL+F+TGQ E+E
Sbjct: 249 EDCPLLSVPGRTFPVEIFFTPNAE-KDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIE 307
Query: 252 YLCSKLRKASKQL 264
C ++ + + L
Sbjct: 308 EACKRIDREIQAL 320
Score = 318 (117.0 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 75/219 (34%), Positives = 114/219 (52%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGE------RLVV 466
E C + +++ +G A GAL +PLY+ LP AAQ R+FE R V
Sbjct: 308 EACKRIDR-EIQALG----ADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCV 362
Query: 467 VSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXX 526
+STN+AETSLTI G+ +V+D G K K YN +ES + ISK
Sbjct: 363 ISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKP 422
Query: 527 XHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVE 586
C+RLY+ + + + D + EI + + VVL +K + + + +F F PP L+
Sbjct: 423 GKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMR 482
Query: 587 AERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLLT 625
A L L+A++ +G LT LG MA +P+ P+ ++ML+T
Sbjct: 483 ALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLIT 521
Score = 61 (26.5 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 14/68 (20%), Positives = 35/68 (51%)
Query: 697 KLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
+++ A + A+F++ D LT+ F+ ++ ++C + ++ +TM+ +R QL
Sbjct: 549 EMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQL 608
Query: 757 LHLLFNQN 764
++ N
Sbjct: 609 SRVMDKYN 616
Score = 44 (20.5 bits), Expect = 8.3e-27, Sum P(3) = 8.3e-27
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 5 LPSSLQRPLAAPIVVHVSRPNEVENNRKDLPIVMM 39
L + +R LA I++ + + E+ NR D+ +V+M
Sbjct: 203 LDEAHERTLATDILMGLIK--EIVRNRADIKVVIM 235
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 328 (120.5 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 87/253 (34%), Positives = 136/253 (53%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGR--- 87
R LP+ +++ ME + +N + + GETG GKTTQ+PQ+ E + G+
Sbjct: 73 RSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEF-MKQQQQGQPPGQARL 131
Query: 88 IGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL-- 145
+ TQPRRVA ++ A RVA E+ + LG+EVG+ +R + I + +K+ TDG+LLRE
Sbjct: 132 VACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMN 191
Query: 146 KALYEKQQQLL------RS-------GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLF 192
L +K + L+ R+ G E +K+++MSATL F R F
Sbjct: 192 SPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKF---QRYF 248
Query: 193 RNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVFVTGQREVE 251
+ P++ VP R FPV + F+ E DY+ A + V+ IH +G IL+F+TGQ E+E
Sbjct: 249 EDCPLLSVPGRTFPVEIFFTPNAE-KDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIE 307
Query: 252 YLCSKLRKASKQL 264
C ++ + + L
Sbjct: 308 EACKRIDREIQAL 320
Score = 318 (117.0 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 75/219 (34%), Positives = 114/219 (52%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGE------RLVV 466
E C + +++ +G A GAL +PLY+ LP AAQ R+FE R V
Sbjct: 308 EACKRIDR-EIQALG----ADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCV 362
Query: 467 VSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXX 526
+STN+AETSLTI G+ +V+D G K K YN +ES + ISK
Sbjct: 363 ISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKP 422
Query: 527 XHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVE 586
C+RLY+ + + + D + EI + + VVL +K + + + +F F PP L+
Sbjct: 423 GKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMR 482
Query: 587 AERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLLT 625
A L L+A++ +G LT LG MA +P+ P+ ++ML+T
Sbjct: 483 ALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLIT 521
Score = 61 (26.5 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 14/68 (20%), Positives = 35/68 (51%)
Query: 697 KLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
+++ A + A+F++ D LT+ F+ ++ ++C + ++ +TM+ +R QL
Sbjct: 549 EMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQL 608
Query: 757 LHLLFNQN 764
++ N
Sbjct: 609 SRVMDKYN 616
Score = 44 (20.5 bits), Expect = 8.3e-27, Sum P(3) = 8.3e-27
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 5 LPSSLQRPLAAPIVVHVSRPNEVENNRKDLPIVMM 39
L + +R LA I++ + + E+ NR D+ +V+M
Sbjct: 203 LDEAHERTLATDILMGLIK--EIVRNRADIKVVIM 235
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 322 (118.4 bits), Expect = 2.4e-56, Sum P(3) = 2.4e-56
Identities = 78/207 (37%), Positives = 108/207 (52%)
Query: 428 DNKRAGVGALCVLPLYAMLPAAAQLRVFEDVK----EGE--RLVVVSTNVAETSLTIPGI 481
DN + +G L +PLY+ LP Q R+FE G R VVVSTN+AETSLTI G+
Sbjct: 307 DNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGV 366
Query: 482 KYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNI 541
+V+D G K K YN +ES + ISK C+RLY+ F N
Sbjct: 367 VFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNE 426
Query: 542 LPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNG 601
+ D + EI + + VVL +K + ID + +F F PP L+ A L L ALD +G
Sbjct: 427 MQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDG 486
Query: 602 RLTALGKAMAHYPMSPRHSRMLLTLIQ 628
LT LG M+ +P+ P+ ++ML+ Q
Sbjct: 487 NLTDLGAVMSEFPLDPQLAKMLIASCQ 513
Score = 319 (117.4 bits), Expect = 2.4e-56, Sum P(3) = 2.4e-56
Identities = 89/275 (32%), Positives = 149/275 (54%)
Query: 3 GNLPSSLQRPLAAPIV--VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETG 60
G +P+ Q P P+ + R + R LP+ + + M ++ + +++ GETG
Sbjct: 40 GFVPNK-QPPTMNPLTNTPYSQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETG 98
Query: 61 CGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQ 120
GKTTQ+PQ+ + F ++ R G + TQPRRVA ++ A+RV+ E+ + LG+EVG+
Sbjct: 99 SGKTTQIPQWCVD--FAVSK--GRKG-VSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYS 153
Query: 121 VRHDKKIGDSCSIKFMTDGILLRELKA--LYEKQQQLL------RS-------GQCIEPK 165
+R + +K+MTDG+LLRE + + ++ Q +L R+ G E
Sbjct: 154 IRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVI 213
Query: 166 DRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAY 225
+ LKL++MSATL F + F N P+++VP R PV + ++ E DY+ A
Sbjct: 214 RQRSDLKLVVMSATLDAGKF---QQYFDNAPLMKVPGRTHPVEIFYTPEPER-DYLEAAI 269
Query: 226 KKVMSIHK-RLPQGGILVFVTGQREVEYLCSKLRK 259
+ V+ IH +G IL+F+TGQ E+E C ++++
Sbjct: 270 RTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKR 304
Score = 65 (27.9 bits), Expect = 2.4e-56, Sum P(3) = 2.4e-56
Identities = 18/79 (22%), Positives = 37/79 (46%)
Query: 686 PMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKT 745
P C +K + AK+ +F++ D LT+ F+ S +C E ++ ++
Sbjct: 530 PQCFVRPNEAKKAADEAKM---RFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRS 586
Query: 746 MEEMSKLRKQLLHLL--FN 762
++ +R+QL ++ FN
Sbjct: 587 LKSADNVRQQLARIMDRFN 605
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 343 (125.8 bits), Expect = 2.5e-56, Sum P(3) = 2.5e-56
Identities = 87/251 (34%), Positives = 137/251 (54%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQF-LFEAGFGSNRCSSRSGRIG 89
R++LP+ E ++ +N ++ GETG GKTTQ+PQF LF+ + ++
Sbjct: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFD-----EMPHLENTQVA 144
Query: 90 VTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA-- 147
TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + K + +K+MTDG+LLRE
Sbjct: 145 CTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDH 204
Query: 148 ---------LYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRN 194
L E ++ L + G + R LK+I+MSATL E F R F +
Sbjct: 205 DLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKF---QRYFND 261
Query: 195 PPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLC 254
P++ VP R +PV ++++ + DY+ A + V+ IH G IL+F+TG+ E+E
Sbjct: 262 APLLAVPGRTYPVELYYTPEFQR-DYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAV 320
Query: 255 SKLRKASKQLL 265
K+ QL+
Sbjct: 321 RKISLEGDQLV 331
Score = 306 (112.8 bits), Expect = 2.5e-56, Sum P(3) = 2.5e-56
Identities = 77/205 (37%), Positives = 100/205 (48%)
Query: 427 GDN--KRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGE-----RLVVVSTNVAETSLTIP 479
GD + G G L V PLY LP Q R+FE E R VV+STN+AETSLTI
Sbjct: 327 GDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTID 386
Query: 480 GIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFN 539
GI YVVD G K K YN +ES + ISK C+RLY+ F
Sbjct: 387 GIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQ 446
Query: 540 NILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDS 599
L + S EI + + VL +K + ID + +F F PP ++ A L L LD
Sbjct: 447 KELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDD 506
Query: 600 NGRLTALGKAMAHYPMSPRHSRMLL 624
G LT LG+ + +P+ P + ML+
Sbjct: 507 EGNLTPLGRLASQFPLDPMLAVMLI 531
Score = 56 (24.8 bits), Expect = 2.5e-56, Sum P(3) = 2.5e-56
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 696 RKLKEVAKLSHAK--FSNPTSD---VLTVAYALQCFELSKSPV-EFCNEYALHLKTMEEM 749
R K+ + AK F++P D +L V +A + E + + ++C ++ L+ +++
Sbjct: 557 RPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAA 616
Query: 750 SKLRKQLLHLLFNQN 764
+R QL L+ N
Sbjct: 617 DNIRSQLERLMNRYN 631
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 339 (124.4 bits), Expect = 6.3e-56, Sum P(3) = 6.3e-56
Identities = 76/200 (38%), Positives = 114/200 (57%)
Query: 431 RAGVGA--LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTG 488
R VG+ L V P+++ LP Q++VFE +G R V+++TN+AETSLTI GI+YVVD+G
Sbjct: 322 RLPVGSKDLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSG 381
Query: 489 REKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCA 548
K K +N GI+S I ISK CYRLY+ F L S
Sbjct: 382 AVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEK-LDTSSIP 440
Query: 549 EISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGK 608
EI + + V+L +K++ I+ + +F F P V +++++ L L+A+ NG LT LGK
Sbjct: 441 EIKRSNIANVILQLKTIGINDILSFDFLESPPVASVIKSLELLFCLDAISDNGSLTELGK 500
Query: 609 AMAHYPMSPRHSRMLLTLIQ 628
MA +P+ P +S+ L+ I+
Sbjct: 501 KMALFPLDPMYSKTLIKSIE 520
Score = 299 (110.3 bits), Expect = 6.3e-56, Sum P(3) = 6.3e-56
Identities = 75/224 (33%), Positives = 124/224 (55%)
Query: 24 PNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSS 83
P E++ ++ LP+ + +++ ++S VII ETG GKTTQ+PQ+L+E G+ N
Sbjct: 63 PKEIKLQKESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDN---- 118
Query: 84 RSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLR 143
G I +TQPRRVA ++ +KRV+ E+G+ LG +VG+ VR D K + +K+MTDG+L+R
Sbjct: 119 --GIIAITQPRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVR 176
Query: 144 E--LKALYEKQQQLL--RSGQCIEPKDRVFPL-KLILMSATLR--VEDFISGGRL----- 191
E L + K ++ + + D +F L K I + ++ I L
Sbjct: 177 EAMLDSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELF 236
Query: 192 ---FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIH 232
F N P++ + RQFPV +++++ + DY+ A V+ IH
Sbjct: 237 SQYFNNAPVLYIEGRQFPVQIYYTEEIQ-KDYVDAALITVLQIH 279
Score = 137 (53.3 bits), Expect = 5.0e-39, Sum P(3) = 5.0e-39
Identities = 45/126 (35%), Positives = 70/126 (55%)
Query: 155 LLRSGQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKR 214
LL+S Q + +++ PLK+I+MSATL E F + F N P++ + RQFPV +++++
Sbjct: 208 LLKSIQ--KRREKKNPLKIIIMSATLDAELF---SQYFNNAPVLYIEGRQFPVQIYYTEE 262
Query: 215 TEIVDYIGQAYKKVMSIH------KRLPQ-----GG-ILVFVTGQREVEYLCSKLRKASK 262
+ DY+ A V+ IH K + + GG ILVF+TG+ E+E L L
Sbjct: 263 IQ-KDYVDAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIP 321
Query: 263 QLLVNS 268
+L V S
Sbjct: 322 RLPVGS 327
Score = 62 (26.9 bits), Expect = 6.3e-56, Sum P(3) = 6.3e-56
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 695 KRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSK--SPVEFCNEYALHLKTMEEMSKL 752
K K KEV + FS P D +T + F+ SK ++C ++ ++LK+M ++ +
Sbjct: 544 KEKKKEVEDVKKIFFS-PDGDHITFLNVFREFQKSKPQQQQQWCFDHFINLKSMIKVLNV 602
Query: 753 RKQLL 757
+QL+
Sbjct: 603 FEQLV 607
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 334 (122.6 bits), Expect = 6.5e-56, Sum P(3) = 6.5e-56
Identities = 76/195 (38%), Positives = 108/195 (55%)
Query: 433 GVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKV 492
G ++ VLPLYA LP A QLRVF+ +G R V+++TN+AETS+TI GIKYVVDTG K
Sbjct: 227 GCPSMLVLPLYASLPYAQQLRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKA 286
Query: 493 KKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISK 552
KKYN +G+E +Q +SK CYRLY+ F + EI +
Sbjct: 287 KKYNPDSGLEVLAVQRVSKTQAWQRAGRAGREDSGICYRLYTENEFEKF-EKMTVPEIQR 345
Query: 553 VPVDGVVLLMKSMNIDKVSNFPF---PTPPEVTALVEAERCLKALEALDSNGRLTALGKA 609
+ V+L + +M + V F F P+P + A V L ALE D+ LT +G+
Sbjct: 346 CNLASVLLQLLAMKVPNVLTFDFMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRK 405
Query: 610 MAHYPMSPRHSRMLL 624
MA +P+ P+ ++ +L
Sbjct: 406 MAAFPLEPKFAKTIL 420
Score = 318 (117.0 bits), Expect = 6.5e-56, Sum P(3) = 6.5e-56
Identities = 87/231 (37%), Positives = 124/231 (53%)
Query: 55 ICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLG 114
+ GETG GKTTQ+PQ+L+E G G R G I VTQPRRVA ++ A RV+ E LG
Sbjct: 4 LSGETGSGKTTQLPQYLYEGGIG------RQGVIAVTQPRRVAAISLATRVSDEKRTELG 57
Query: 115 KEVGFQVRHDKKIGDSCSIKFMTDGILLRE--------------LKALYEKQQQ------ 154
K VG+ VR D + IKF+TDG+LLRE L +E+
Sbjct: 58 KLVGYTVRFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFG 117
Query: 155 LLRSGQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKR 214
++++ Q + R PLK+I+MSAT+ V+ F + F ++ + RQ P+ V ++K+
Sbjct: 118 VVKAAQRRRKELRKLPLKVIVMSATMDVDLF---SQYFNGASVLYLEGRQHPIQVFYTKQ 174
Query: 215 TEIVDYIGQAYKKVMSIHKRLPQG-GILVFVTGQREVEYLCSKLRKASKQL 264
+ DY+ A V IH+ P ILVF+TGQ E+E + R +K L
Sbjct: 175 PQ-QDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHL 224
Score = 42 (19.8 bits), Expect = 6.5e-56, Sum P(3) = 6.5e-56
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
KF + D +T+ + F+ ++C E ++ + M +++R QL
Sbjct: 460 KFLSSEGDHITLLNIYRTFKSLGGDKDWCRENFVNSRNMMLAAEVRAQL 508
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 334 (122.6 bits), Expect = 6.7e-56, Sum P(3) = 6.7e-56
Identities = 84/250 (33%), Positives = 132/250 (52%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+DLP+ E ++ + ++ GETG GKTTQ+PQF+ + ++ I
Sbjct: 96 RRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLL----DDLPQTQRKMIAC 151
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK---- 146
TQPRRVA ++ A+RVA EL + LG+EVG+ +R + +K+MTDG+LLRE
Sbjct: 152 TQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDHE 211
Query: 147 -------ALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
L E ++ + + G E R LK+I+MSATL + F R F +
Sbjct: 212 LSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKF---QRYFNDA 268
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
P++ VP R PV + ++ E DY+ A + V+ IH +G IL+F+TG+ E+E
Sbjct: 269 PLLAVPGRTHPVEIFYTPEPE-QDYVEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAAR 327
Query: 256 KLRKASKQLL 265
K+ +++
Sbjct: 328 KISLEGDEMI 337
Score = 287 (106.1 bits), Expect = 6.7e-56, Sum P(3) = 6.7e-56
Identities = 79/224 (35%), Positives = 109/224 (48%)
Query: 411 TPEQCPELSSPDVEKMGDN--KRAGVGALCVLPLYAMLPAAAQLRVFEDV----KEGER- 463
T E+ E ++ + GD + A G L V LY LP Q R+FE + G R
Sbjct: 317 TGEEEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRP 376
Query: 464 --LVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXX 521
V+VSTN+AETSLTI GI YVVD G K K YN +ES + ISK
Sbjct: 377 GRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRA 436
Query: 522 XXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEV 581
C+RLY+ + F L D + EI + + VL +K + ID + +F PP
Sbjct: 437 GRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAP 496
Query: 582 TALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLLT 625
L+ A L L LD +G LT LG+ + +P+ P + ML++
Sbjct: 497 ETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLIS 540
Score = 81 (33.6 bits), Expect = 6.7e-56, Sum P(3) = 6.7e-56
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 709 FSNPTSDVLTVAYALQCF---ELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
F++P D LT+ A F E ++P ++C+++ L L++++ +R QLL ++
Sbjct: 580 FAHPDGDHLTLLNAYHAFKSPEAQENPKQWCHDHFLSLRSLQSADNVRMQLLRIM 634
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 557 (201.1 bits), Expect = 2.1e-55, Sum P(2) = 2.1e-55
Identities = 157/427 (36%), Positives = 233/427 (54%)
Query: 4 NLPSSLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGK 63
N P+ + + + P VH R EV+N R LPI+ EQ++ME +N+N VI+ GETG GK
Sbjct: 234 NPPACIHQTVYVP--VH--RTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGK 289
Query: 64 TTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRH 123
TTQ+PQFL+EAG+ ++ IGVT+PRRVA +A +KRVA E+ L EV + +R
Sbjct: 290 TTQLPQFLYEAGYAQHKM------IGVTEPRRVAAIAMSKRVAHEMNLP-ESEVSYLIRF 342
Query: 124 DKKIGDSCSIKFMTDGILLRELKA--LYEKQQQLL------RS-------GQC--IEP-- 164
+ + + IKFMTDG+LL+E++ L K ++ RS G I P
Sbjct: 343 EGNVTPATRIKFMTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLR 402
Query: 165 KDRVFPLKLILMSATLRVEDFISGGRLFR-NPPIIEVPTRQFPVTVHFSKRTEIVDYIGQ 223
R PLKLI+MSATLRV DF RLF+ PP+++V RQFPVT+HF KRT DY+ +
Sbjct: 403 HKRGQPLKLIIMSATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPD-DYVAE 461
Query: 224 AYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEP 283
AY+K + IH +LP+GGIL+FVTGQ+EV L KLR+ +K+ N V++ E
Sbjct: 462 AYRKTLKIHNKLPEGGILIFVTGQQEVNQLVRKLRRTFPYHHA-PTKDVAKNGKVSEEEK 520
Query: 284 NATKDINMKEINEAFEIQGYSTEQQTDRFSSYDED---QFDIDDNELD--ALSDSETESE 338
T D + + E++ + ++ + Q + LD L +TE++
Sbjct: 521 EETIDDAASTVEDPKELE-FDMKRVIRNIRKSKKKFLAQMALPKINLDDYKLPGDDTEAD 579
Query: 339 T-EILGEDEKLVEQKCPMDGDDPVDVLKENWSLGS-LKLAFEVLSGKNASGPSSQMKLST 396
E ED++ ++ D DD + L++ +GS + VL + Q ++
Sbjct: 580 MHEQPDEDDE--QEGLEEDNDDELG-LEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFL 636
Query: 397 PAIPEQC 403
P +P+ C
Sbjct: 637 P-VPDGC 642
Score = 419 (152.6 bits), Expect = 9.7e-37, Sum P(3) = 9.7e-37
Identities = 99/249 (39%), Positives = 142/249 (57%)
Query: 391 QMKLSTPAIPEQCTELPPTPTPEQCPE---LSSPDVEKMGDNKRAGVGA-----LCVLPL 442
++ L +P TE P++ E L + +++G +G+G+ L VLPL
Sbjct: 563 KINLDDYKLPGDDTEADMHEQPDEDDEQEGLEEDNDDELGLEDESGMGSGQRQPLWVLPL 622
Query: 443 YAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIE 502
Y++L + Q R+F V +G RL VVSTNVAETSLTIP IKYVVD GR+K + Y+ G+
Sbjct: 623 YSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVS 682
Query: 503 SYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLM 562
++ + + SK HCYRLYSSAV+N+ DFS +I K PV+ ++L M
Sbjct: 683 AFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQM 742
Query: 563 KSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALD----SNGRL----TALGKAMAHYP 614
+ M ID+V +FPFP+PP+ L AER L L AL+ N L T LG ++ +P
Sbjct: 743 RCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFP 802
Query: 615 MSPRHSRML 623
++PR +ML
Sbjct: 803 VAPRFGKML 811
Score = 53 (23.7 bits), Expect = 2.1e-55, Sum P(2) = 2.1e-55
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 734 EFCNEYALHLKTMEEMSKLRKQL 756
EFC L K M E+ KLR QL
Sbjct: 894 EFCAANGLRQKAMSEVRKLRVQL 916
Score = 48 (22.0 bits), Expect = 9.7e-37, Sum P(3) = 9.7e-37
Identities = 26/103 (25%), Positives = 43/103 (41%)
Query: 216 EIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGN 275
E+ Y + + + + KRLP + +R+ + L K ++ L VN+ K +K
Sbjct: 106 ELQQYTSISQVQTVGL-KRLPTLDEYLAKKKERQAQVLAEK--SSASGLRVNAIKGSKRK 162
Query: 276 QVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDED 318
+V + E K N I S E+ + SS DED
Sbjct: 163 LLVEEEEELQAKRKNPNVI---------SVEEDDEDSSSSDED 196
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 301 (111.0 bits), Expect = 2.5e-55, Sum P(3) = 2.5e-55
Identities = 68/146 (46%), Positives = 93/146 (63%)
Query: 3 GNLPSSLQ--RPLA-APIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGET 59
G L S +Q RP +P V S ++ +R+ LPI +E+ ++E V N +II GET
Sbjct: 7 GELKSFVQNSRPNPKSPTVSPFSMRQKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGET 66
Query: 60 GCGKTTQVPQFLFEAGFGSNRCSSRSGR-IGVTQPRRVAVLATAKRVAFELGLHLGKEVG 118
G GKTTQ+PQFL+ AGF C R G+ IG+TQPRR+A + AKRVA E + LG++VG
Sbjct: 67 GSGKTTQLPQFLYNAGF----C--REGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVG 120
Query: 119 FQVRHDKKIGDSCSIKFMTDGILLRE 144
+ +R D S +K+MTDG+LLRE
Sbjct: 121 YSIRFDDTTSGSTRLKYMTDGLLLRE 146
Score = 271 (100.5 bits), Expect = 2.5e-55, Sum P(3) = 2.5e-55
Identities = 65/213 (30%), Positives = 111/213 (52%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVA 472
E L ++ + ++KR L L +++ LP+ Q++VF G R V+++TN+A
Sbjct: 305 ESVERLVQERLQNIPEDKRK----LLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIA 360
Query: 473 ETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRL 532
ETS+TIPGI+YV+D G K + Y+ + G+ES ++ SK +RL
Sbjct: 361 ETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRL 420
Query: 533 YSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLK 592
Y F L D + EI + + ++L +K++ ID + F F P A+++A L
Sbjct: 421 YPEREFEK-LEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGAIIKALAELH 479
Query: 593 ALEALDSNGRL-TALGKAMAHYPMSPRHSRMLL 624
+L AL +G+L +G M+ P+ P +S+ L+
Sbjct: 480 SLGALADDGKLENPVGYQMSRLPLEPVYSKALI 512
Score = 126 (49.4 bits), Expect = 2.5e-55, Sum P(3) = 2.5e-55
Identities = 32/85 (37%), Positives = 44/85 (51%)
Query: 167 RVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYK 226
++ PLKLI+MSA+L F F + V RQFPV + ++ E DY+
Sbjct: 225 KLSPLKLIIMSASLDARVF---SEYFGGAKAVHVQGRQFPVDILYTVHPES-DYVDATLV 280
Query: 227 KVMSIHKRLPQGGILVFVTGQREVE 251
+ IH G ILVF+TGQ E+E
Sbjct: 281 TIFQIHFEEKPGDILVFLTGQDEIE 305
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 379 (138.5 bits), Expect = 3.6e-54, Sum P(3) = 3.6e-54
Identities = 100/270 (37%), Positives = 146/270 (54%)
Query: 13 LAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLF 72
LA + R ++ RK LP+ + E+++ + N +II GETG GKTTQ+PQ+L
Sbjct: 202 LAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLV 261
Query: 73 EAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVR-HDKKIGDSC 131
E GF +I +TQPRRVA + A RVA E+ + LGKEVG+Q+R DK +
Sbjct: 262 EDGF----TDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKT 317
Query: 132 SIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCIEPKDRVFP----LKLILM 176
+K+MTDG+LLRE + E ++ L + I + P LKL++
Sbjct: 318 VLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLIS 377
Query: 177 SATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIH--KR 234
SAT+ + F F N PI VP R++PV +H++ + E +YI A + IH +
Sbjct: 378 SATMNAKKF---SEFFDNCPIFNVPGRRYPVDIHYTLQPE-ANYIHAAITTIFQIHTTQS 433
Query: 235 LPQGGILVFVTGQREVEYLCSKLRKASKQL 264
LP G ILVF+TGQ E+E +KL + +L
Sbjct: 434 LP-GDILVFLTGQEEIERTKTKLEEIMSKL 462
Score = 259 (96.2 bits), Expect = 3.6e-54, Sum P(3) = 3.6e-54
Identities = 59/189 (31%), Positives = 95/189 (50%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
+ + P+YA LP QL++F+ E R VV++TN+AETSLTI GI+YV+D G K Y
Sbjct: 469 MIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYV 528
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+ G+ S+ C+R+++ + + L EI++ +
Sbjct: 529 PSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLS 588
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VLL+ S+ + + FP P + L ++ L L AL+S G +T LGK M +P
Sbjct: 589 NTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCE 648
Query: 617 PRHSRMLLT 625
P +++L T
Sbjct: 649 PEFAKVLYT 657
Score = 46 (21.3 bits), Expect = 3.6e-54, Sum P(3) = 3.6e-54
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 729 SKSPVEFCNEYALHLKTMEEMSKLRKQL 756
SK +C ++ + KTM + +R QL
Sbjct: 717 SKFSRSWCQDHKIQFKTMLRVRNIRNQL 744
Score = 39 (18.8 bits), Expect = 3.0e-31, Sum P(3) = 3.0e-31
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 364 LKENWSLGSLKLAFE---VLSGKNASGPSSQ---MKLSTPAIPEQCTELPPTPTPEQC 415
L + S+ +L+ + E +L N+ G ++ M P PE L T EQC
Sbjct: 607 LMDKPSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQC 664
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 349 (127.9 bits), Expect = 2.2e-53, Sum P(2) = 2.2e-53
Identities = 86/256 (33%), Positives = 138/256 (53%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
++ R+DLP+ +E ++ + ++ GETG GKTTQ+PQF+ + +
Sbjct: 86 DILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLY-----DEMPHLT 140
Query: 86 GR-IGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE 144
G+ + TQPRRVA ++ A RVA E+ + LG+EVG+ +R + G +K+MTDG+LLRE
Sbjct: 141 GKQVACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLRE 200
Query: 145 LKA-----------LYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGG 189
L E ++ L + G + R LK+I+MSATL E F +
Sbjct: 201 AMEDHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQN-- 258
Query: 190 RLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQRE 249
F N P++ VP R PV ++++ + DY+ A + V+ IH +G IL+F+TG+ E
Sbjct: 259 -YFNNAPLLAVPGRTHPVEIYYTPEFQR-DYLDAAIRTVLQIHATEGEGDILLFLTGEEE 316
Query: 250 VEYLCSKLRKASKQLL 265
+E C K+ +L+
Sbjct: 317 IEDACRKISLEGDELV 332
Score = 284 (105.0 bits), Expect = 2.2e-53, Sum P(2) = 2.2e-53
Identities = 74/207 (35%), Positives = 100/207 (48%)
Query: 427 GDN--KRAGVGALCVLPLYAMLPAAAQLRVFEDVK-----EGE--RLVVVSTNVAETSLT 477
GD + G L V PLY LP Q ++FE G R V++STN+AETSLT
Sbjct: 328 GDELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLT 387
Query: 478 IPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAV 537
I GI YVVD G K K YN +ES + ISK C+RLY+
Sbjct: 388 IDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEA 447
Query: 538 FNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEAL 597
F L + S EI + + VL +K + ID + +F F PP ++ A L L+ L
Sbjct: 448 FKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLQCL 507
Query: 598 DSNGRLTALGKAMAHYPMSPRHSRMLL 624
G LTALG+ + +P+ P + ML+
Sbjct: 508 SDEGDLTALGRLASQFPLDPMLAVMLI 534
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 308 (113.5 bits), Expect = 1.1e-52, Sum P(3) = 1.1e-52
Identities = 83/256 (32%), Positives = 136/256 (53%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H R E+ R LP+ ++ + +N + + ++ GETG GKTTQ+PQ+ + +
Sbjct: 97 HTPRYYEILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVD--MVRS 154
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ G + TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + +K+MTDG
Sbjct: 155 LPGPKRG-VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDG 213
Query: 140 ILLRE-----LKALY------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE L Y E ++ L + G E + LK+I+MSATL
Sbjct: 214 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGK 273
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F F N P++ +P R PV + ++ E DY+ A + V+ IH +G +L+F
Sbjct: 274 FQV---YFDNCPLLTIPGRTHPVEIFYTPEPER-DYLEAAIRTVIQIHMCEEDEGDVLLF 329
Query: 244 VTGQREVEYLCSKLRK 259
+TGQ E++ C ++++
Sbjct: 330 LTGQEEIDEACKRIKR 345
Score = 304 (112.1 bits), Expect = 1.1e-52, Sum P(3) = 1.1e-52
Identities = 74/218 (33%), Positives = 113/218 (51%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGE------RLVV 466
E C + +++ +G + VG + ++PLY+ LP Q R+FE + R VV
Sbjct: 338 EACKRIKR-EIDDLGPD----VGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVV 392
Query: 467 VSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXX 526
VSTN+AETSLTI G+ +V+D G K K YN +ES + ISK
Sbjct: 393 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRP 452
Query: 527 XHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVE 586
C+RLY+ + + D + EI + + VVL +K + ID + +F F PP L+
Sbjct: 453 GKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMR 512
Query: 587 AERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
A L L AL+ +G LT LG MA +P+ P+ ++M++
Sbjct: 513 ALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 550
Score = 62 (26.9 bits), Expect = 1.1e-52, Sum P(3) = 1.1e-52
Identities = 15/66 (22%), Positives = 34/66 (51%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
K+ A S +F++ D LT+ F+ + V++C + ++ +++ +R+QL
Sbjct: 581 KKAADESKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSR 640
Query: 759 LL--FN 762
++ FN
Sbjct: 641 IMDRFN 646
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 308 (113.5 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 63/191 (32%), Positives = 103/191 (53%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +L LY +P Q ++F+ +G R VV+TN+A TSLTI GI+Y+VD+G K
Sbjct: 275 VDGLLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQL 334
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
+NS G++ E+ ISK C+R+YS ++ +P+++ EI +
Sbjct: 335 NHNSRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRT 394
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ V+L +K + + V FP+ PE ++ A + L +A+D G +T LG+ M +
Sbjct: 395 SLTSVILTLKCLGVHDVIRFPYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEF 454
Query: 614 PMSPRHSRMLL 624
P+ P +R LL
Sbjct: 455 PLPPNLTRALL 465
Score = 299 (110.3 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 63/126 (50%), Positives = 89/126 (70%)
Query: 23 RPNEVENNR-KDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
R +E E++ K LPI + ++++AV +N+ +I+ GETG GKTTQ+PQ+L++AG
Sbjct: 6 RSSETEHHESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGL----- 60
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
SR+GRIGVTQPRRVA + A+RV+ E+ + LG+EVG+QVR D IK+MTDG L
Sbjct: 61 -SRNGRIGVTQPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCL 119
Query: 142 LRELKA 147
LRE+ A
Sbjct: 120 LREILA 125
Score = 235 (87.8 bits), Expect = 7.9e-46, Sum P(3) = 7.9e-46
Identities = 74/246 (30%), Positives = 121/246 (49%)
Query: 32 KDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN-RCS-SRSGRIG 89
K LPI + ++++AV +N+ +I+ GETG GKTTQ+PQ+L++AG N R ++ R+
Sbjct: 16 KKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNGRIGVTQPRRVA 75
Query: 90 -VTQPRRVAVLATAKRVAFELGLHLG-KEVGFQVRHDKKIGDSCSIK-FMTDGILLR-EL 145
+T +RV+ R+ E+G + + + K + D C ++ + D L + +
Sbjct: 76 AITVAQRVSSEMQV-RLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLTQYSI 134
Query: 146 KALYEKQQQ---------LLRSGQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNPP 196
L E ++ LL+ + PLK+++MSATL E S + N P
Sbjct: 135 VILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSS---FYGNCP 191
Query: 197 IIEVPTRQFPVTVHFS-----KRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
+ +P R +PV F K E Y+ + K + +H G ILVF+TGQ E+E
Sbjct: 192 VFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHTNEAAGDILVFLTGQSEIE 251
Query: 252 YLCSKL 257
C L
Sbjct: 252 KACDLL 257
Score = 64 (27.6 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 20/80 (25%), Positives = 35/80 (43%)
Query: 681 LDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYA 740
L E+ R K K+K EV A S ++D L + + S++P +C E
Sbjct: 483 LSVENIFIRPGKPEKQKEAEVRHKEIAACSGGSNDFLMLLCVFEKCRASENPSAWCKENW 542
Query: 741 LHLKTMEEMSKLRKQLLHLL 760
+H + ++ + QL +L
Sbjct: 543 IHWRAVKSAFSVETQLREIL 562
Score = 37 (18.1 bits), Expect = 3.1e-24, Sum P(3) = 3.1e-24
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 423 VEKMGDNKRAGVGALCVLPL 442
V+++ N R G+ L V+P+
Sbjct: 331 VKQLNHNSRVGLDILEVVPI 350
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 306 (112.8 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 76/218 (34%), Positives = 113/218 (51%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDV----KEGE--RLVV 466
E C + +V+ +G VG + ++PLY+ LP Q R+FE + G R VV
Sbjct: 364 EACKRIKR-EVDDLGPE----VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 467 VSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXX 526
VSTN+AETSLTI G+ +V+D G K K YN +ES + ISK
Sbjct: 419 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRP 478
Query: 527 XHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVE 586
C+RLY+ + + D + EI + + VVL +K + ID + +F F PP L+
Sbjct: 479 GKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMR 538
Query: 587 AERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
A L L AL+ +G LT LG MA +P+ P+ ++M++
Sbjct: 539 ALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 300 (110.7 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 82/256 (32%), Positives = 135/256 (52%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H R ++ R LP+ + + + + + ++ GETG GKTTQ+PQ+ E + +
Sbjct: 123 HTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE--YMRS 180
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ G + TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + +K+MTDG
Sbjct: 181 LPGPKRG-VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDG 239
Query: 140 ILLRE-----LKALY------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE L Y E ++ L + G E + LK+I+MSATL
Sbjct: 240 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGK 299
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F F N P++ +P R PV + ++ E DY+ A + V+ IH +G +L+F
Sbjct: 300 FQI---YFDNCPLLTIPGRTHPVEIFYTPEPER-DYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 244 VTGQREVEYLCSKLRK 259
+TGQ E++ C ++++
Sbjct: 356 LTGQEEIDEACKRIKR 371
Score = 63 (27.2 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 17/79 (21%), Positives = 38/79 (48%)
Query: 686 PMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKT 745
P C +K + AK+ +F++ D LT+ F+ + V++C + ++ ++
Sbjct: 597 PQCFVRPTEAKKAADEAKM---RFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRS 653
Query: 746 MEEMSKLRKQLLHLL--FN 762
+ +R+QL ++ FN
Sbjct: 654 LMSADNVRQQLSRIMDRFN 672
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 306 (112.8 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 76/218 (34%), Positives = 113/218 (51%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDV----KEGE--RLVV 466
E C + +V+ +G VG + ++PLY+ LP Q R+FE + G R VV
Sbjct: 364 EACKRIKR-EVDDLGPE----VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 467 VSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXX 526
VSTN+AETSLTI G+ +V+D G K K YN +ES + ISK
Sbjct: 419 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRP 478
Query: 527 XHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVE 586
C+RLY+ + + D + EI + + VVL +K + ID + +F F PP L+
Sbjct: 479 GKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMR 538
Query: 587 AERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
A L L AL+ +G LT LG MA +P+ P+ ++M++
Sbjct: 539 ALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 300 (110.7 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 82/256 (32%), Positives = 135/256 (52%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H R ++ R LP+ + + + + + ++ GETG GKTTQ+PQ+ E + +
Sbjct: 123 HTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE--YMRS 180
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ G + TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + +K+MTDG
Sbjct: 181 LPGPKRG-VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDG 239
Query: 140 ILLRE-----LKALY------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE L Y E ++ L + G E + LK+I+MSATL
Sbjct: 240 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGK 299
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F F N P++ +P R PV + ++ E DY+ A + V+ IH +G +L+F
Sbjct: 300 FQI---YFDNCPLLTIPGRTHPVEIFYTPEPER-DYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 244 VTGQREVEYLCSKLRK 259
+TGQ E++ C ++++
Sbjct: 356 LTGQEEIDEACKRIKR 371
Score = 63 (27.2 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 17/79 (21%), Positives = 38/79 (48%)
Query: 686 PMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKT 745
P C +K + AK+ +F++ D LT+ F+ + V++C + ++ ++
Sbjct: 597 PQCFVRPTEAKKAADEAKM---RFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRS 653
Query: 746 MEEMSKLRKQLLHLL--FN 762
+ +R+QL ++ FN
Sbjct: 654 LMSADNVRQQLSRIMDRFN 672
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 306 (112.8 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 76/218 (34%), Positives = 113/218 (51%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDV----KEGE--RLVV 466
E C + +V+ +G VG + ++PLY+ LP Q R+FE + G R VV
Sbjct: 364 EACKRIKR-EVDDLGPE----VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 467 VSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXX 526
VSTN+AETSLTI G+ +V+D G K K YN +ES + ISK
Sbjct: 419 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRP 478
Query: 527 XHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVE 586
C+RLY+ + + D + EI + + VVL +K + ID + +F F PP L+
Sbjct: 479 GKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMR 538
Query: 587 AERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
A L L AL+ +G LT LG MA +P+ P+ ++M++
Sbjct: 539 ALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 300 (110.7 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 82/256 (32%), Positives = 135/256 (52%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H R ++ R LP+ + + + + + ++ GETG GKTTQ+PQ+ E + +
Sbjct: 123 HTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE--YMRS 180
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ G + TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + +K+MTDG
Sbjct: 181 LPGPKRG-VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDG 239
Query: 140 ILLRE-----LKALY------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE L Y E ++ L + G E + LK+I+MSATL
Sbjct: 240 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGK 299
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F F N P++ +P R PV + ++ E DY+ A + V+ IH +G +L+F
Sbjct: 300 FQI---YFDNCPLLTIPGRTHPVEIFYTPEPER-DYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 244 VTGQREVEYLCSKLRK 259
+TGQ E++ C ++++
Sbjct: 356 LTGQEEIDEACKRIKR 371
Score = 63 (27.2 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 17/79 (21%), Positives = 38/79 (48%)
Query: 686 PMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKT 745
P C +K + AK+ +F++ D LT+ F+ + V++C + ++ ++
Sbjct: 597 PQCFVRPTEAKKAADEAKM---RFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRS 653
Query: 746 MEEMSKLRKQLLHLL--FN 762
+ +R+QL ++ FN
Sbjct: 654 LMSADNVRQQLSRIMDRFN 672
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 306 (112.8 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 76/218 (34%), Positives = 113/218 (51%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDV----KEGE--RLVV 466
E C + +V+ +G VG + ++PLY+ LP Q R+FE + G R VV
Sbjct: 364 EACKRIKR-EVDDLGPE----VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 467 VSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXX 526
VSTN+AETSLTI G+ +V+D G K K YN +ES + ISK
Sbjct: 419 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRP 478
Query: 527 XHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVE 586
C+RLY+ + + D + EI + + VVL +K + ID + +F F PP L+
Sbjct: 479 GKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMR 538
Query: 587 AERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
A L L AL+ +G LT LG MA +P+ P+ ++M++
Sbjct: 539 ALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 300 (110.7 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 82/256 (32%), Positives = 135/256 (52%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H R ++ R LP+ + + + + + ++ GETG GKTTQ+PQ+ E + +
Sbjct: 123 HTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE--YMRS 180
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ G + TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + +K+MTDG
Sbjct: 181 LPGPKRG-VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDG 239
Query: 140 ILLRE-----LKALY------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE L Y E ++ L + G E + LK+I+MSATL
Sbjct: 240 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGK 299
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F F N P++ +P R PV + ++ E DY+ A + V+ IH +G +L+F
Sbjct: 300 FQI---YFDNCPLLTIPGRTHPVEIFYTPEPER-DYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 244 VTGQREVEYLCSKLRK 259
+TGQ E++ C ++++
Sbjct: 356 LTGQEEIDEACKRIKR 371
Score = 63 (27.2 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 17/79 (21%), Positives = 38/79 (48%)
Query: 686 PMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKT 745
P C +K + AK+ +F++ D LT+ F+ + V++C + ++ ++
Sbjct: 597 PQCFVRPTEAKKAADEAKM---RFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRS 653
Query: 746 MEEMSKLRKQLLHLL--FN 762
+ +R+QL ++ FN
Sbjct: 654 LMSADNVRQQLSRIMDRFN 672
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 306 (112.8 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 76/218 (34%), Positives = 113/218 (51%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDV----KEGE--RLVV 466
E C + +V+ +G VG + ++PLY+ LP Q R+FE + G R VV
Sbjct: 364 EACKRIKR-EVDDLGPE----VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 467 VSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXX 526
VSTN+AETSLTI G+ +V+D G K K YN +ES + ISK
Sbjct: 419 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRP 478
Query: 527 XHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVE 586
C+RLY+ + + D + EI + + VVL +K + ID + +F F PP L+
Sbjct: 479 GKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMR 538
Query: 587 AERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
A L L AL+ +G LT LG MA +P+ P+ ++M++
Sbjct: 539 ALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 300 (110.7 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 82/256 (32%), Positives = 135/256 (52%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H R ++ R LP+ + + + + + ++ GETG GKTTQ+PQ+ E + +
Sbjct: 123 HTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE--YMRS 180
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ G + TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + +K+MTDG
Sbjct: 181 LPGPKRG-VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDG 239
Query: 140 ILLRE-----LKALY------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE L Y E ++ L + G E + LK+I+MSATL
Sbjct: 240 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGK 299
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F F N P++ +P R PV + ++ E DY+ A + V+ IH +G +L+F
Sbjct: 300 FQI---YFDNCPLLTIPGRTHPVEIFYTPEPER-DYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 244 VTGQREVEYLCSKLRK 259
+TGQ E++ C ++++
Sbjct: 356 LTGQEEIDEACKRIKR 371
Score = 63 (27.2 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 17/79 (21%), Positives = 38/79 (48%)
Query: 686 PMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKT 745
P C +K + AK+ +F++ D LT+ F+ + V++C + ++ ++
Sbjct: 597 PQCFVRPTEAKKAADEAKM---RFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRS 653
Query: 746 MEEMSKLRKQLLHLL--FN 762
+ +R+QL ++ FN
Sbjct: 654 LMSADNVRQQLSRIMDRFN 672
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 306 (112.8 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 76/218 (34%), Positives = 113/218 (51%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDV----KEGE--RLVV 466
E C + +V+ +G VG + ++PLY+ LP Q R+FE + G R VV
Sbjct: 364 EACKRIKR-EVDDLGPE----VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 418
Query: 467 VSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXX 526
VSTN+AETSLTI G+ +V+D G K K YN +ES + ISK
Sbjct: 419 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRP 478
Query: 527 XHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVE 586
C+RLY+ + + D + EI + + VVL +K + ID + +F F PP L+
Sbjct: 479 GKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMR 538
Query: 587 AERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
A L L AL+ +G LT LG MA +P+ P+ ++M++
Sbjct: 539 ALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 576
Score = 300 (110.7 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 82/256 (32%), Positives = 135/256 (52%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H R ++ R LP+ + + + + + ++ GETG GKTTQ+PQ+ E + +
Sbjct: 123 HTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE--YMRS 180
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ G + TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + +K+MTDG
Sbjct: 181 LPGPKRG-VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDG 239
Query: 140 ILLRE-----LKALY------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE L Y E ++ L + G E + LK+I+MSATL
Sbjct: 240 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGK 299
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F F N P++ +P R PV + ++ E DY+ A + V+ IH +G +L+F
Sbjct: 300 FQI---YFDNCPLLTIPGRTHPVEIFYTPEPER-DYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 244 VTGQREVEYLCSKLRK 259
+TGQ E++ C ++++
Sbjct: 356 LTGQEEIDEACKRIKR 371
Score = 63 (27.2 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 17/79 (21%), Positives = 38/79 (48%)
Query: 686 PMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKT 745
P C +K + AK+ +F++ D LT+ F+ + V++C + ++ ++
Sbjct: 597 PQCFVRPTEAKKAADEAKM---RFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRS 653
Query: 746 MEEMSKLRKQLLHLL--FN 762
+ +R+QL ++ FN
Sbjct: 654 LMSADNVRQQLSRIMDRFN 672
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 305 (112.4 bits), Expect = 6.0e-52, Sum P(3) = 6.0e-52
Identities = 75/218 (34%), Positives = 113/218 (51%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDV----KEGE--RLVV 466
E C + +++ +G VG + ++PLY+ LP Q R+FE + G R VV
Sbjct: 331 EACKRIKR-EIDDLGPE----VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVV 385
Query: 467 VSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXX 526
VSTN+AETSLTI G+ +V+D G K K YN +ES + ISK
Sbjct: 386 VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRP 445
Query: 527 XHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVE 586
C+RLY+ + + D + EI + + VVL +K + ID + +F F PP L+
Sbjct: 446 GKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMR 505
Query: 587 AERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
A L L AL+ +G LT LG MA +P+ P+ ++M++
Sbjct: 506 ALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI 543
Score = 299 (110.3 bits), Expect = 6.0e-52, Sum P(3) = 6.0e-52
Identities = 81/256 (31%), Positives = 136/256 (53%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H R ++ R LP+ ++ + + + + ++ GETG GKTTQ+PQ+ + + +
Sbjct: 90 HTPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVD--YMRS 147
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ G + TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + +K+MTDG
Sbjct: 148 LPGPKRG-VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDG 206
Query: 140 ILLRE-----LKALY------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE L Y E ++ L + G E + LK+I+MSATL
Sbjct: 207 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGK 266
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F F N P++ +P R PV + ++ E DY+ A + V+ IH +G +L+F
Sbjct: 267 FQI---YFDNCPLLTIPGRTHPVEIFYTPEPER-DYLEAAIRTVIQIHMCEEEEGDLLLF 322
Query: 244 VTGQREVEYLCSKLRK 259
+TGQ E++ C ++++
Sbjct: 323 LTGQEEIDEACKRIKR 338
Score = 63 (27.2 bits), Expect = 6.0e-52, Sum P(3) = 6.0e-52
Identities = 17/79 (21%), Positives = 38/79 (48%)
Query: 686 PMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKT 745
P C +K + AK+ +F++ D LT+ F+ + V++C + ++ ++
Sbjct: 564 PQCFVRPTEAKKAADEAKM---RFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRS 620
Query: 746 MEEMSKLRKQLLHLL--FN 762
+ +R+QL ++ FN
Sbjct: 621 LMSADNVRQQLSRIMDRFN 639
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 275 (101.9 bits), Expect = 6.2e-52, Sum P(4) = 6.2e-52
Identities = 66/190 (34%), Positives = 99/190 (52%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L LPL++ L Q+ +FE+ R V+ STN+AE S+TI GI YVVD+G K++ YN
Sbjct: 280 LLPLPLFSGLSTEQQMYIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYN 339
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
GIE+ ISK C+RLY+ + + L D + E+ + +
Sbjct: 340 PKTGIETLTAVPISKAAAAQRAGRAGRTKPGKCFRLYTEESYTS-LSDTNIPEVQRSNLA 398
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA-LGKAMAHYPM 615
+L +K++ ID V +F F TPP + +A L +L ALD +LT LG MA +
Sbjct: 399 PFILQLKALGIDNVLHFDFLTPPPAELMTKALELLYSLGALDDYAKLTKPLGLRMAELAV 458
Query: 616 SPRHSRMLLT 625
P ++ LL+
Sbjct: 459 DPMMAKTLLS 468
Score = 249 (92.7 bits), Expect = 6.2e-52, Sum P(4) = 6.2e-52
Identities = 64/170 (37%), Positives = 98/170 (57%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGR-IGVTQ 92
LPI + ++ V N ++ G+TG GKTTQ+PQFL +AG+ CS G+ IGVTQ
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGW----CSD--GKLIGVTQ 74
Query: 93 PRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-----LKA 147
PRR+A A RVA E G +GKEVG+ +R + ++ IKF+TDG+L+RE L +
Sbjct: 75 PRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLS 134
Query: 148 LY------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFIS 187
Y E ++ + + G + + + L++I+ SATL+ E F++
Sbjct: 135 RYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLA 184
Score = 118 (46.6 bits), Expect = 6.2e-52, Sum P(4) = 6.2e-52
Identities = 30/94 (31%), Positives = 52/94 (55%)
Query: 171 LKLILMSATLRVEDFIS-------GGRLFRNPP------IIEVPTRQFPVTVHFSKRTEI 217
L++I+ SATL+ E F++ G R R P I+ + R +P+ + + + +
Sbjct: 168 LRIIISSATLQAEQFLAFFSSTLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLE-SPA 226
Query: 218 VDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
DY+ +A V+ +H+ P G ILVF+TG+ E+E
Sbjct: 227 EDYLQRAVSTVLDVHENEPDGDILVFLTGRDEIE 260
Score = 65 (27.9 bits), Expect = 6.2e-52, Sum P(4) = 6.2e-52
Identities = 24/69 (34%), Positives = 32/69 (46%)
Query: 694 GKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVE--FCNEYALHLKTMEEMSK 751
G+RK E + KF+ D LT Q F ++K E FC+E L+ KTM
Sbjct: 497 GERKQFESRR---RKFAAGEGDHLTFLNVYQAF-VTKGRKESGFCHENLLNYKTMSRAVS 552
Query: 752 LRKQLLHLL 760
+R QL L
Sbjct: 553 IRAQLKRYL 561
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 304 (112.1 bits), Expect = 6.6e-52, Sum P(3) = 6.6e-52
Identities = 88/265 (33%), Positives = 135/265 (50%)
Query: 15 APIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEA 74
API++ S+ +E +K LP+ I++ + N V+I ETG GKTTQ+PQFL A
Sbjct: 50 APILL-TSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLA 108
Query: 75 GFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIK 134
G+ N G IG+TQPRRVA + A+RVA EL +G VG+ VR + + I+
Sbjct: 109 GYAKN------GMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIR 162
Query: 135 FMTDGILLRE-LK-ALYEKQQQLL--RSGQCIEPKDRVFPL-----------KLILMSAT 179
F+TDG+LLRE +K L K ++ + + D +F + KL +
Sbjct: 163 FLTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVV 222
Query: 180 LRVEDF-ISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQG 238
+ I + N + + R +PV V +K E DYI + IH+ P+
Sbjct: 223 VTSATMDIDHFGNYFNCKGMYLEGRTYPVRVMHTKE-EHEDYIHTVLVTLFHIHRTTPKN 281
Query: 239 -GILVFVTGQREVEYLCSKLRKASK 262
+L+F+TGQ E+E L ++R+ +K
Sbjct: 282 HDVLIFLTGQEEIESLAQQIRQLAK 306
Score = 271 (100.5 bits), Expect = 6.6e-52, Sum P(3) = 6.6e-52
Identities = 68/211 (32%), Positives = 107/211 (50%)
Query: 417 ELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSL 476
E + + ++ G L V LYA L QL F R V+++TN+AETS+
Sbjct: 295 ESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSI 354
Query: 477 TIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSA 536
TIPGI+ V+D G K K +N+ +G++ + ISK CYR Y+ A
Sbjct: 355 TIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKA 414
Query: 537 VFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEA 596
++ D + EI + +VL + +++ID +NF F PP L A + L AL A
Sbjct: 415 EMDSFA-DATQPEILRTNPTSMVLQLLALDID-CNNFDFLDPPLEDGLRSAYKSLDALGA 472
Query: 597 LDS--NGRLTALGKAMAHYPMSPRHSRMLLT 625
+ + + +T LG+ M YP+ P++S++LLT
Sbjct: 473 IKTGDDSYITPLGRQMVQYPLDPKYSKLLLT 503
Score = 89 (36.4 bits), Expect = 6.6e-52, Sum P(3) = 6.6e-52
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 700 EVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL--- 756
E+A L+HAKF + D LT+ F S+ P +C++ L+L+++ +R+QL
Sbjct: 534 EMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREI 593
Query: 757 ---LHLLFNQN 764
LHL N +
Sbjct: 594 SEHLHLALNSS 604
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 330 (121.2 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 80/215 (37%), Positives = 119/215 (55%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGA-LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNV 471
E+ + S +E+ R G+ L VLP+YA LP+ Q++VFE V R V+V+TNV
Sbjct: 285 EEVETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNV 344
Query: 472 AETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYR 531
AETS+TI GI YV+D G K++ YN IE + +SK CYR
Sbjct: 345 AETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYR 404
Query: 532 LYSSAVFN-NILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERC 590
LY++ + LP + E+ + + V+L +K++ ID V FPF +PP ++V+A
Sbjct: 405 LYTATEEDFEKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALEL 464
Query: 591 LKALEALDSNGRLTA-LGKAMAHYPMSPRHSRMLL 624
L AL LD + RLT LG +A +P++P ++MLL
Sbjct: 465 LYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLL 499
Score = 256 (95.2 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 78/210 (37%), Positives = 110/210 (52%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+E R+ LP+ + I+ V ++I GETGCGK+TQ+PQ+L EAG+ + G
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGW------TAEG 100
Query: 87 RI-GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS-IKFMTDGILLRE 144
R+ GVTQPRRVA ++ A RVA E G LG EVG+ +R D + IKF+TDG+L+RE
Sbjct: 101 RVVGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVRE 160
Query: 145 LKA-----------LYEKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGG 189
+ A L E ++ L + I ++ L+LI+ SATL E F
Sbjct: 161 MMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKF---- 216
Query: 190 RLFRNPPIIEVPTRQFPVTVHFSKRTEIVD 219
R F N P++ V + RT VD
Sbjct: 217 RDFFNQNDTGDPSKDTSVILTVEGRTFPVD 246
Score = 119 (46.9 bits), Expect = 2.3e-37, Sum P(3) = 2.3e-37
Identities = 37/101 (36%), Positives = 52/101 (51%)
Query: 171 LKLILMSATLRVE---DFIS----GGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQ 223
L+LI+ SATL E DF + G I+ V R FPV + F ++ + DYI
Sbjct: 202 LRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDI-FYIQSPVPDYIKS 260
Query: 224 AYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
+ M IH+ G IL F+TGQ EVE + S L + ++ L
Sbjct: 261 TVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARAL 301
Score = 73 (30.8 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
K A H KF+ D LT+ + F ++C E+ L+ K + S +R+QL
Sbjct: 530 KSQAARQHRKFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKK 589
Query: 759 LL 760
LL
Sbjct: 590 LL 591
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 328 (120.5 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 73/189 (38%), Positives = 108/189 (57%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP+YA LP+ Q++VFE V R V+V+TNVAETS+TI GI YV+D G K++ YN
Sbjct: 310 LRILPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 369
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
IE + +S+ CYRLY+ F+ LP + E+ + +
Sbjct: 370 PRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDQ-LPQSTVPEMQRSNLA 428
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA-LGKAMAHYPM 615
V+L +K++ ID V F F +PP ++V+A L AL LD + RLT LG +A +P+
Sbjct: 429 PVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPL 488
Query: 616 SPRHSRMLL 624
+P ++MLL
Sbjct: 489 NPMFAKMLL 497
Score = 263 (97.6 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 83/229 (36%), Positives = 115/229 (50%)
Query: 8 SLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQV 67
SL A +V + +E R+ LP+ + I+ + + V+I GETGCGK+TQ+
Sbjct: 28 SLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQI 87
Query: 68 PQFLFEAGFGSNRCSSRSGRI-GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKK 126
PQ+L EAG+ + GR+ GVTQPRRVA + A RVA E G LG EVG+ +R D
Sbjct: 88 PQYLAEAGW------TAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDC 141
Query: 127 IGDSCS-IKFMTDGILLRELKA-----------LYEKQQQLLRSGQCIEPKDRVFP---- 170
+ IKF+TDG+L+RE+ L E ++ L + I ++
Sbjct: 142 TNPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGD 201
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVD 219
L+LI+ SATL E F R F N PTR V + RT VD
Sbjct: 202 LRLIVASATLDAEKF----RDFFNHNDTSDPTRDTCVILTVEGRTFPVD 246
Score = 121 (47.7 bits), Expect = 7.8e-37, Sum P(3) = 7.8e-37
Identities = 38/102 (37%), Positives = 54/102 (52%)
Query: 171 LKLILMSATLRVE---DFISGGRLFRNPP-----IIEVPTRQFPVTVHFSKRTEIVDYIG 222
L+LI+ SATL E DF + +P I+ V R FPV + F ++ + DYI
Sbjct: 202 LRLIVASATLDAEKFRDFFNHNDT-SDPTRDTCVILTVEGRTFPVDI-FYLQSPVPDYIK 259
Query: 223 QAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
+ VM IH+ G IL F+TGQ EVE + S L + ++ L
Sbjct: 260 STVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARAL 301
Score = 68 (29.0 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
K A +H KF+ D LT+ + F ++C E+ L+ K + + +R+QL
Sbjct: 528 KSQAIRAHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKK 587
Query: 759 LL 760
LL
Sbjct: 588 LL 589
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 329 (120.9 bits), Expect = 3.0e-51, Sum P(3) = 3.0e-51
Identities = 74/189 (39%), Positives = 108/189 (57%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLP+YA LP+ Q++VFE V R V+V+TNVAETS+TI GI YV+D G K++ YN
Sbjct: 302 LRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 361
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
IE + +S+ CYRLY+ F+ LP + E+ + +
Sbjct: 362 PRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDK-LPQCTVPEMQRSNLA 420
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA-LGKAMAHYPM 615
V+L +K++ ID V F F +PP ++V+A L AL LD + RLT LG +A +P+
Sbjct: 421 PVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPL 480
Query: 616 SPRHSRMLL 624
+P ++MLL
Sbjct: 481 NPMFAKMLL 489
Score = 262 (97.3 bits), Expect = 3.0e-51, Sum P(3) = 3.0e-51
Identities = 83/229 (36%), Positives = 115/229 (50%)
Query: 8 SLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQV 67
SL A +V + +E R+ LP+ + I+ V + V+I GETGCGK+TQ+
Sbjct: 20 SLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQI 79
Query: 68 PQFLFEAGFGSNRCSSRSGRI-GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKK 126
PQ+L EAG+ + GR+ GVTQPRRVA + A RVA E G LG EVG+ +R D
Sbjct: 80 PQYLAEAGW------TAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDC 133
Query: 127 IGDSCS-IKFMTDGILLRELKA-----------LYEKQQQLLRSGQCIEPKDRVF----P 170
+ IKF+TDG+L+RE+ L E ++ L + I ++
Sbjct: 134 TDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGD 193
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVD 219
L+L++ SATL E F R F N PTR V + RT VD
Sbjct: 194 LRLLVASATLDAEKF----RDFFNQNETSDPTRDTCVILTVEGRTFPVD 238
Score = 121 (47.7 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 37/102 (36%), Positives = 54/102 (52%)
Query: 171 LKLILMSATLRVE---DFISGGRLFRNPP-----IIEVPTRQFPVTVHFSKRTEIVDYIG 222
L+L++ SATL E DF + +P I+ V R FPV + F ++ + DYI
Sbjct: 194 LRLLVASATLDAEKFRDFFNQNET-SDPTRDTCVILTVEGRTFPVDI-FYLQSPVPDYIK 251
Query: 223 QAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
+ VM IH+ G IL F+TGQ EVE + S L + ++ L
Sbjct: 252 STVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARAL 293
Score = 64 (27.6 bits), Expect = 3.0e-51, Sum P(3) = 3.0e-51
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 706 HAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
H KF+ D LT+ + F ++C E+ L+ K + + +R+QL LL
Sbjct: 527 HRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVREQLKKLL 581
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 329 (120.9 bits), Expect = 3.1e-51, Sum P(3) = 3.1e-51
Identities = 74/189 (39%), Positives = 108/189 (57%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLP+YA LP+ Q++VFE V R V+V+TNVAETS+TI GI YV+D G K++ YN
Sbjct: 310 LRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 369
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
IE + +S+ CYRLY+ F+ LP + E+ + +
Sbjct: 370 PRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDK-LPQCTVPEMQRSNLA 428
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA-LGKAMAHYPM 615
V+L +K++ ID V F F +PP ++V+A L AL LD + RLT LG +A +P+
Sbjct: 429 PVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPL 488
Query: 616 SPRHSRMLL 624
+P ++MLL
Sbjct: 489 NPMFAKMLL 497
Score = 262 (97.3 bits), Expect = 3.1e-51, Sum P(3) = 3.1e-51
Identities = 83/229 (36%), Positives = 115/229 (50%)
Query: 8 SLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQV 67
SL A +V + +E R+ LP+ + I+ V + V+I GETGCGK+TQ+
Sbjct: 28 SLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQI 87
Query: 68 PQFLFEAGFGSNRCSSRSGRI-GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKK 126
PQ+L EAG+ + GR+ GVTQPRRVA + A RVA E G LG EVG+ +R D
Sbjct: 88 PQYLAEAGW------TAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDC 141
Query: 127 IGDSCS-IKFMTDGILLRELKA-----------LYEKQQQLLRSGQCIEPKDRVF----P 170
+ IKF+TDG+L+RE+ L E ++ L + I ++
Sbjct: 142 TDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGD 201
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVD 219
L+L++ SATL E F R F N PTR V + RT VD
Sbjct: 202 LRLLVASATLDAEKF----RDFFNQNETSDPTRDTCVILTVEGRTFPVD 246
Score = 121 (47.7 bits), Expect = 1.6e-36, Sum P(3) = 1.6e-36
Identities = 37/102 (36%), Positives = 54/102 (52%)
Query: 171 LKLILMSATLRVE---DFISGGRLFRNPP-----IIEVPTRQFPVTVHFSKRTEIVDYIG 222
L+L++ SATL E DF + +P I+ V R FPV + F ++ + DYI
Sbjct: 202 LRLLVASATLDAEKFRDFFNQNET-SDPTRDTCVILTVEGRTFPVDI-FYLQSPVPDYIK 259
Query: 223 QAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
+ VM IH+ G IL F+TGQ EVE + S L + ++ L
Sbjct: 260 STVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARAL 301
Score = 64 (27.6 bits), Expect = 3.1e-51, Sum P(3) = 3.1e-51
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 706 HAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
H KF+ D LT+ + F ++C E+ L+ K + + +R+QL LL
Sbjct: 535 HRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVREQLKKLL 589
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 329 (120.9 bits), Expect = 6.2e-51, Sum P(3) = 6.2e-51
Identities = 80/214 (37%), Positives = 117/214 (54%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGA-LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNV 471
E+ + S +E+ R G+ L VLP+YA LP+ Q++VFE V R V+V+TNV
Sbjct: 285 EEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNV 344
Query: 472 AETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYR 531
AETS+TI GI YV+D G K++ YN IE + +S+ CYR
Sbjct: 345 AETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYR 404
Query: 532 LYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCL 591
LY+ F LP + E+ + + VVL +K++ ID V F F +PP ++V+A L
Sbjct: 405 LYTEEAFEQ-LPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELL 463
Query: 592 KALEALDSNGRLTA-LGKAMAHYPMSPRHSRMLL 624
AL LD + RLT LG +A +P++P ++MLL
Sbjct: 464 YALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLL 497
Score = 256 (95.2 bits), Expect = 6.2e-51, Sum P(3) = 6.2e-51
Identities = 80/210 (38%), Positives = 108/210 (51%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+E R+ LP+ + I+ V + V+I GETGCGK+TQVPQ+L EAG+ + G
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGW------TAEG 100
Query: 87 RI-GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS-IKFMTDGILLRE 144
R+ GVTQPRRVA + A RVA E G LG EVG+ +R D + IKF+TDG+L+RE
Sbjct: 101 RVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVRE 160
Query: 145 LKA-----------LYEKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGG 189
+ L E ++ L + I ++ L+LI+ SATL E F
Sbjct: 161 MMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKF---- 216
Query: 190 RLFRNPPIIEVPTRQFPVTVHFSKRTEIVD 219
R F N P R V + RT VD
Sbjct: 217 RDFFNQNETSDPARDTCVILTVEGRTFPVD 246
Score = 118 (46.6 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 38/110 (34%), Positives = 56/110 (50%)
Query: 171 LKLILMSATLRVE---DFISGGRLFRNPP-----IIEVPTRQFPVTVHFSKRTEIVDYIG 222
L+LI+ SATL E DF + +P I+ V R FPV + F ++ + DYI
Sbjct: 202 LRLIVASATLDAEKFRDFFNQNET-SDPARDTCVILTVEGRTFPVDI-FYLQSPVPDYIK 259
Query: 223 QAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKEN 272
V+ IH+ G IL F+TGQ EVE + S L + ++ L K++
Sbjct: 260 ATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKH 309
Score = 66 (28.3 bits), Expect = 6.2e-51, Sum P(3) = 6.2e-51
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
K A H KF+ D LT+ + F ++C E+ L+ K + + +R QL
Sbjct: 528 KSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKK 587
Query: 759 LL 760
LL
Sbjct: 588 LL 589
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 319 (117.4 bits), Expect = 7.2e-51, Sum P(3) = 7.2e-51
Identities = 72/204 (35%), Positives = 115/204 (56%)
Query: 422 DVEKMGDNKRAGVGALC-VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPG 480
++ ++ R A C VLPLY+ L + Q ++F+ G R +V++TNVAETSLT+PG
Sbjct: 302 EIRDTAESLRKHHPADCEVLPLYSRLTVSEQEKIFKP--HGRRRIVLATNVAETSLTVPG 359
Query: 481 IKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNN 540
I+ V+D G ++ +Y+ + ++ I+ IS+ C RLYS F N
Sbjct: 360 IRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDFLN 419
Query: 541 ILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSN 600
P+F+ EI + + V+L MK++N+ + FPF PP+ + + R L+ + ALD+
Sbjct: 420 -RPEFTDPEILRTNLAAVILQMKALNLGDIRVFPFVEPPDERLVRDGLRTLQEINALDAQ 478
Query: 601 GRLTALGKAMAHYPMSPRHSRMLL 624
GRLT LG+ +A P+ PR R+LL
Sbjct: 479 GRLTELGRRLARLPVDPRLGRILL 502
Score = 284 (105.0 bits), Expect = 7.2e-51, Sum P(3) = 7.2e-51
Identities = 81/196 (41%), Positives = 106/196 (54%)
Query: 32 KDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVT 91
++LP+ EI EA+ N VI+CGETG GKTTQ+P+ EAG G G IG T
Sbjct: 72 EELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQ------GYIGHT 125
Query: 92 QPRRVAVLATAKRVAFELGLHLGKEVGFQVR-HDKKIGDSCSIKFMTDGILLRELKA--L 148
QPRR+A + A R+A EL LG+ VG++VR HD+ DS IK MTDGILL E +
Sbjct: 126 QPRRIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSL-IKLMTDGILLAETQTDRF 184
Query: 149 YEKQQQLL------RS-------GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
++ L+ RS G R LKL++ SAT+ E F R F N
Sbjct: 185 LDQYDTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERF---SRHFDNA 241
Query: 196 PIIEVPTRQFPVTVHF 211
PI+ VP R +PV + +
Sbjct: 242 PIVRVPGRTYPVEIRY 257
Score = 64 (27.6 bits), Expect = 7.2e-51, Sum P(3) = 7.2e-51
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVA-----YALQCFELSKSPV- 733
AL DP R+ K + A HA+F +P SD + + Y Q LS S +
Sbjct: 519 ALSVPDP--RERPADKA---QAADQKHARFRHPDSDFMAILALWNDYEEQRQHLSGSKLR 573
Query: 734 EFCNEYALHLKTMEEMSKLRKQLLHLL 760
++C + L M E + +Q+L ++
Sbjct: 574 QYCRDNFLSALRMREWRDIHQQILEVV 600
Score = 37 (18.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 17/75 (22%), Positives = 34/75 (45%)
Query: 663 EGTQTNSNDSELEERDNALDSEDPMCRQEK-------LGKRKLKEVAKLSHAKFSNPTSD 715
+ + S+++E E+ LD+ D + R+ G+R++++ A+ S K +
Sbjct: 261 DSAEEESDETERGEQQAILDAVDELHRENTGDILIFLSGEREIRDTAE-SLRKHHPADCE 319
Query: 716 VLTVAYALQCFELSK 730
VL + L E K
Sbjct: 320 VLPLYSRLTVSEQEK 334
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 329 (120.9 bits), Expect = 8.3e-51, Sum P(3) = 8.3e-51
Identities = 80/214 (37%), Positives = 117/214 (54%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGA-LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNV 471
E+ + S +E+ R G+ L VLP+YA LP+ Q++VFE V R V+V+TNV
Sbjct: 285 EEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNV 344
Query: 472 AETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYR 531
AETS+TI GI YV+D G K++ YN IE + +S+ CYR
Sbjct: 345 AETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYR 404
Query: 532 LYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCL 591
LY+ F LP + E+ + + VVL +K++ ID V F F +PP ++V+A L
Sbjct: 405 LYTEEAFEQ-LPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELL 463
Query: 592 KALEALDSNGRLTA-LGKAMAHYPMSPRHSRMLL 624
AL LD + RLT LG +A +P++P ++MLL
Sbjct: 464 YALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLL 497
Score = 256 (95.2 bits), Expect = 8.3e-51, Sum P(3) = 8.3e-51
Identities = 80/210 (38%), Positives = 108/210 (51%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+E R+ LP+ + I+ V + V+I GETGCGK+TQVPQ+L EAG+ + G
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGW------TAEG 100
Query: 87 RI-GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS-IKFMTDGILLRE 144
R+ GVTQPRRVA + A RVA E G LG EVG+ +R D + IKF+TDG+L+RE
Sbjct: 101 RVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVRE 160
Query: 145 LKA-----------LYEKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGG 189
+ L E ++ L + I ++ L+LI+ SATL E F
Sbjct: 161 MMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKF---- 216
Query: 190 RLFRNPPIIEVPTRQFPVTVHFSKRTEIVD 219
R F N P R V + RT VD
Sbjct: 217 RDFFNQNETSDPARDTCVILTVEGRTFPVD 246
Score = 118 (46.6 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 38/110 (34%), Positives = 56/110 (50%)
Query: 171 LKLILMSATLRVE---DFISGGRLFRNPP-----IIEVPTRQFPVTVHFSKRTEIVDYIG 222
L+LI+ SATL E DF + +P I+ V R FPV + F ++ + DYI
Sbjct: 202 LRLIVASATLDAEKFRDFFNQNET-SDPARDTCVILTVEGRTFPVDI-FYLQSPVPDYIK 259
Query: 223 QAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKEN 272
V+ IH+ G IL F+TGQ EVE + S L + ++ L K++
Sbjct: 260 ATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKH 309
Score = 66 (28.3 bits), Expect = 8.3e-51, Sum P(3) = 8.3e-51
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
K A H KF+ D LT+ + F ++C E+ L+ K + + +R QL
Sbjct: 528 KSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKK 587
Query: 759 LL 760
LL
Sbjct: 588 LL 589
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 336 (123.3 bits), Expect = 9.1e-51, Sum P(3) = 9.1e-51
Identities = 90/262 (34%), Positives = 140/262 (53%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQF-LFEAGFGS 78
H + ++ R++LP+ QE ++ + ++ GETG GKTTQ+PQ+ L++
Sbjct: 93 HSQQYFKILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHL 152
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTD 138
N+ + TQPRRVA ++ A+RVA EL + LG+EVG+ +R + K S +K+MTD
Sbjct: 153 NK-----KMVACTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTD 207
Query: 139 GILLREL-----KALY------EKQQQLLRSGQCI----EPKDRVFPLKLILMSATLRVE 183
G LLRE Y E ++ L + + + R LK+I+MSATL
Sbjct: 208 GQLLRETIHDPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAA 267
Query: 184 DFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVF 243
F R F PI+ VP R PV + ++ E DYI + + V+ IH +G IL+F
Sbjct: 268 KF---QRYFFEAPILAVPGRTHPVEIFYTAEAER-DYIEASVRTVLQIHATEAEGDILLF 323
Query: 244 VTGQREVEYLCSKLRKASKQLL 265
+TG+ E+E +C K+R +L+
Sbjct: 324 LTGEEEIEDVCRKVRLEVDELI 345
Score = 269 (99.8 bits), Expect = 9.1e-51, Sum P(3) = 9.1e-51
Identities = 68/201 (33%), Positives = 101/201 (50%)
Query: 432 AGVGALCVLPLYAMLPAAAQLRVFE----DVKEGER---LVVVSTNVAETSLTIPGIKYV 484
A G + V PLY LP Q ++F +K+G R +V+TN+AETSLTI GI YV
Sbjct: 348 ADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYV 407
Query: 485 VDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPD 544
VD G K K YN+ +ES + IS+ C+RLY+ A F L +
Sbjct: 408 VDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIE 467
Query: 545 FSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLT 604
+ EI + + +L +K + +D + +F F PP ++ A L L L+ +G LT
Sbjct: 468 QTYPEILRSNLSNTILELKKLGVDDLVHFDFMDPPAPETMMRALEELNYLSCLNDDGDLT 527
Query: 605 ALGKAMAHYPMSPRHSRMLLT 625
LG + YP+ P + ML++
Sbjct: 528 DLGHMASEYPLDPALAVMLVS 548
Score = 48 (22.0 bits), Expect = 9.1e-51, Sum P(3) = 9.1e-51
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 709 FSNPTSDVLTVAYALQCF--ELSKSP--VEFCNEYALHLKTMEEMSKLRKQLLHLLFNQN 764
F + D LT+ A F E++K ++C+E+ L + + +R QL ++ Q+
Sbjct: 588 FKHMEGDHLTLLNAYHAFKSEMAKGTDMKKWCHEHFLSYRHLSSADNVRAQLKGIMERQD 647
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 329 (120.9 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 74/189 (39%), Positives = 108/189 (57%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLP+YA LP+ Q++VFE V R V+V+TNVAETS+TI GI YV+D G K++ YN
Sbjct: 310 LRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 369
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
IE + +S+ CYRLY+ F+ LP + E+ + +
Sbjct: 370 PRTAIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAFDQ-LPQSTVPEMQRSNLA 428
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA-LGKAMAHYPM 615
V+L +K++ ID V F F +PP ++V+A L AL LD + RLT LG +A +P+
Sbjct: 429 PVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPL 488
Query: 616 SPRHSRMLL 624
+P ++MLL
Sbjct: 489 NPMFAKMLL 497
Score = 257 (95.5 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 82/229 (35%), Positives = 114/229 (49%)
Query: 8 SLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQV 67
SL A +V + +E R+ LP+ + I+ + + V+I GETGCGK+TQ+
Sbjct: 28 SLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQI 87
Query: 68 PQFLFEAGFGSNRCSSRSGRI-GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKK 126
PQ+L EAG+ + GR+ GVTQPRRVA + A RVA E G LG EVG+ +R D
Sbjct: 88 PQYLAEAGW------TAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDC 141
Query: 127 IGDSCS-IKFMTDGILLRELKA-----------LYEKQQQLLRSGQCIEPKDRVFP---- 170
+ IKF+TDG+L+RE+ L E ++ L + I ++
Sbjct: 142 TDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGD 201
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVD 219
L+LI+ SATL E F R F N P R V + RT VD
Sbjct: 202 LRLIVASATLDAEKF----RDFFNQNDTSDPPRDTCVILTVEGRTFPVD 246
Score = 129 (50.5 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 39/102 (38%), Positives = 55/102 (53%)
Query: 171 LKLILMSATLRVE---DFISGGRLFRNPP-----IIEVPTRQFPVTVHFSKRTEIVDYIG 222
L+LI+ SATL E DF + +PP I+ V R FPV + F ++ + DYI
Sbjct: 202 LRLIVASATLDAEKFRDFFNQNDT-SDPPRDTCVILTVEGRTFPVDI-FYLQSPVPDYIK 259
Query: 223 QAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
+ VM IH+ G IL F+TGQ EVE + S L + ++ L
Sbjct: 260 STVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARAL 301
Score = 65 (27.9 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 706 HAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
H KF+ D LT+ + F ++C E+ L+ K + + +R+QL LL
Sbjct: 535 HRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLL 589
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 292 (107.8 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 92/302 (30%), Positives = 147/302 (48%)
Query: 14 AAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFE 73
++ V +V+ + R+ LPI +I+ + + VI+ GETG GK+TQVPQ+L+E
Sbjct: 27 SSAFVFNVNHNMGLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYE 86
Query: 74 AGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSI 133
G+ + G IG+T+PRRV+ + A RVA E G +G VG+ VR + + I
Sbjct: 87 WGWHTK------GLIGITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKI 140
Query: 134 KFMTDGILLRELKA-----LY------EKQQQLLRSGQCIEPKDRVF----PLKLILMSA 178
KFMT+GILLRE+ A Y E ++ + + + ++ LKLI+ SA
Sbjct: 141 KFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSA 200
Query: 179 TLRVE---DFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRL 235
T+ +F S + + R PV+ +F DY+ + + V +H++
Sbjct: 201 TIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVS-NFYLNEPCADYVKETVETVWKLHQKE 259
Query: 236 PQGGILVFVTGQREV--------EYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATK 287
P G IL F+TGQ EV EY+ S ++ K L + S + V + P T+
Sbjct: 260 PPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTR 319
Query: 288 DI 289
+
Sbjct: 320 KV 321
Score = 287 (106.1 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 69/188 (36%), Positives = 99/188 (52%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLP+Y + + QL VF +G R VV++TN+AETS+TIPGI YV+D G KVK YN
Sbjct: 293 LKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYN 352
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+S I +SK YRLY+ + + + P E+ + +
Sbjct: 353 PKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPR-QPPEMRRSELS 411
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA-LGKAMAHYPM 615
G +L +K++ I + F FP+PP L+ A L AL+A+D G LT +G +A P
Sbjct: 412 GAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPF 471
Query: 616 SPRHSRML 623
S S+ML
Sbjct: 472 SAMLSKML 479
Score = 74 (31.1 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLL 757
++ +++H KF D +T+ A F EFC +Y L + ++ LR+QL+
Sbjct: 513 QQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLI 571
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 320 (117.7 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 91/266 (34%), Positives = 142/266 (53%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
++ LPI + E+++AV +N+ +II GETG GKTTQ+ Q+L+E G+ R+G I
Sbjct: 476 KESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGY------HRNGIICC 529
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL---KA 147
TQPRRVA ++ A RV++E+ + +G VG+ +R + I+++TDGILLRE K
Sbjct: 530 TQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKE 589
Query: 148 L--Y------EKQQQLLRSGQCIEPKDRVF----PLKLILMSATLRVEDFISGGRLFRNP 195
L Y E ++ + + + + LKLI+ SAT+ + F + F N
Sbjct: 590 LDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSA---FFGNA 646
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQ-----GGILVFVTGQREV 250
PI + R F V + + RT DYI A +K + IH G IL+F+TGQ ++
Sbjct: 647 PIYNIQGRTFKVHIEYL-RTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDI 705
Query: 251 EYLCSKLRKASKQLLVNSSKENKGNQ 276
C L + ++ S KE+K N+
Sbjct: 706 NATCYLLSERFYEVY-ESYKESKNNK 730
Score = 281 (104.0 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 61/186 (32%), Positives = 103/186 (55%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+ P+Y+ L + Q ++F+ K R ++VSTN+AETSLT+ GIKYV+DTG K+K YN
Sbjct: 774 IFPIYSQLSSEQQSKIFK--KYDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
G++ ++ IS+ CYRLY+ F L + EI + + V
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
VLL+KS+++ + F F P +++ + L L A+++ G LT +G+ M +P+ P
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 619 HSRMLL 624
S++++
Sbjct: 952 LSKIVI 957
Score = 47 (21.6 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 14/72 (19%), Positives = 30/72 (41%)
Query: 693 LGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKL 752
L ++ E + KF+ P SD LT+ + +C + + K + + ++
Sbjct: 982 LESKENNESIESKKEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEV 1041
Query: 753 RKQLLHLLFNQN 764
QL+ ++ N
Sbjct: 1042 YSQLIDIIKTLN 1053
Score = 47 (21.6 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 17 IVVHVSRPNEVENNRKDLPIVMMEQEIMEA 46
I +HVS N +NN D+ I M QE + A
Sbjct: 679 IQIHVS-DNNYDNNFGDILIFMTGQEDINA 707
Score = 44 (20.5 bits), Expect = 3.5e-20, Sum P(3) = 3.5e-20
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 282 EPNATKDINMKEINEAFEIQGYSTEQQTDRFS 313
E N TKD ++ + + ++ +++ D++S
Sbjct: 563 EDNTTKDTKIRYVTDGILLRETLNDKELDKYS 594
Score = 43 (20.2 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 247 QREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKD-INMKEIN 295
++ +E+ K+ K +K+L + K N ++ E + KD ++ + +N
Sbjct: 35 EKTLEFKRRKVNKINKKLTTDDVKSNIFKKIDTFEEASFKKDKVSKRYLN 84
Score = 39 (18.8 bits), Expect = 5.5e-24, Sum P(3) = 5.5e-24
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 267 NSSKENKGN-QVVADSEPNATKDINMKEINEAFEIQGY-STEQQTDRFSSYDEDQFDIDD 324
N++ N N + D + N T D +M F I S+EQQ+ F YD + +
Sbjct: 745 NNNNNNDSNIKKKVDGDNN-TND-HMIYPFYIFPIYSQLSSEQQSKIFKKYDLRKIIVST 802
Query: 325 N 325
N
Sbjct: 803 N 803
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 320 (117.7 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 91/266 (34%), Positives = 142/266 (53%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
++ LPI + E+++AV +N+ +II GETG GKTTQ+ Q+L+E G+ R+G I
Sbjct: 476 KESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGY------HRNGIICC 529
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL---KA 147
TQPRRVA ++ A RV++E+ + +G VG+ +R + I+++TDGILLRE K
Sbjct: 530 TQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKE 589
Query: 148 L--Y------EKQQQLLRSGQCIEPKDRVF----PLKLILMSATLRVEDFISGGRLFRNP 195
L Y E ++ + + + + LKLI+ SAT+ + F + F N
Sbjct: 590 LDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSA---FFGNA 646
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQ-----GGILVFVTGQREV 250
PI + R F V + + RT DYI A +K + IH G IL+F+TGQ ++
Sbjct: 647 PIYNIQGRTFKVHIEYL-RTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDI 705
Query: 251 EYLCSKLRKASKQLLVNSSKENKGNQ 276
C L + ++ S KE+K N+
Sbjct: 706 NATCYLLSERFYEVY-ESYKESKNNK 730
Score = 281 (104.0 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 61/186 (32%), Positives = 103/186 (55%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+ P+Y+ L + Q ++F+ K R ++VSTN+AETSLT+ GIKYV+DTG K+K YN
Sbjct: 774 IFPIYSQLSSEQQSKIFK--KYDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
G++ ++ IS+ CYRLY+ F L + EI + + V
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
VLL+KS+++ + F F P +++ + L L A+++ G LT +G+ M +P+ P
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 619 HSRMLL 624
S++++
Sbjct: 952 LSKIVI 957
Score = 47 (21.6 bits), Expect = 4.0e-49, Sum P(3) = 4.0e-49
Identities = 14/72 (19%), Positives = 30/72 (41%)
Query: 693 LGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKL 752
L ++ E + KF+ P SD LT+ + +C + + K + + ++
Sbjct: 982 LESKENNESIESKKEKFTVPESDHLTLLNIYLQWRSHNYSYSWCTKNFIQYKALNKAKEV 1041
Query: 753 RKQLLHLLFNQN 764
QL+ ++ N
Sbjct: 1042 YSQLIDIIKTLN 1053
Score = 47 (21.6 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 17 IVVHVSRPNEVENNRKDLPIVMMEQEIMEA 46
I +HVS N +NN D+ I M QE + A
Sbjct: 679 IQIHVS-DNNYDNNFGDILIFMTGQEDINA 707
Score = 44 (20.5 bits), Expect = 3.5e-20, Sum P(3) = 3.5e-20
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 282 EPNATKDINMKEINEAFEIQGYSTEQQTDRFS 313
E N TKD ++ + + ++ +++ D++S
Sbjct: 563 EDNTTKDTKIRYVTDGILLRETLNDKELDKYS 594
Score = 43 (20.2 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 247 QREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKD-INMKEIN 295
++ +E+ K+ K +K+L + K N ++ E + KD ++ + +N
Sbjct: 35 EKTLEFKRRKVNKINKKLTTDDVKSNIFKKIDTFEEASFKKDKVSKRYLN 84
Score = 39 (18.8 bits), Expect = 5.5e-24, Sum P(3) = 5.5e-24
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 267 NSSKENKGN-QVVADSEPNATKDINMKEINEAFEIQGY-STEQQTDRFSSYDEDQFDIDD 324
N++ N N + D + N T D +M F I S+EQQ+ F YD + +
Sbjct: 745 NNNNNNDSNIKKKVDGDNN-TND-HMIYPFYIFPIYSQLSSEQQSKIFKKYDLRKIIVST 802
Query: 325 N 325
N
Sbjct: 803 N 803
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 290 (107.1 bits), Expect = 1.0e-48, Sum P(3) = 1.0e-48
Identities = 70/191 (36%), Positives = 101/191 (52%)
Query: 436 ALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKY 495
+L LPLYA L Q+ VFE E R VVVSTN+AE S+TI GI YVVD G K++ Y
Sbjct: 279 SLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAKLRAY 338
Query: 496 NSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPV 555
+ + GIE+ ISK C+RLY+ + LPD + EI + +
Sbjct: 339 DPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCFRLYTQHAYEQ-LPDATIPEIQRSNL 397
Query: 556 DGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA-LGKAMAHYP 614
V++ +K++ ID + F F T P ++ A L +L A+D +LT LG MA
Sbjct: 398 APVIMQLKALGIDNIVRFDFLTSPPADLVIRAFELLYSLGAIDDYAKLTKPLGMRMAELA 457
Query: 615 MSPRHSRMLLT 625
+ P +++LL+
Sbjct: 458 VDPMMAKVLLS 468
Score = 235 (87.8 bits), Expect = 1.0e-48, Sum P(3) = 1.0e-48
Identities = 64/168 (38%), Positives = 94/168 (55%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LPI +Q I+ V I+ G+TG GKTTQ+PQ+L +AG+ C+ I VTQP
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGW----CTEGKA-IAVTQP 76
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-----LKAL 148
RRVA A RVA E+ LG++VG+ +R + + IKF+TDG+LLRE L +
Sbjct: 77 RRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLSR 136
Query: 149 Y------EKQQQLLRSGQCIEPKDRVF---P-LKLILMSATLRVEDFI 186
Y E ++ L + + ++ P L++I+ SATL+ EDF+
Sbjct: 137 YSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFL 184
Score = 109 (43.4 bits), Expect = 1.0e-48, Sum P(3) = 1.0e-48
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 171 LKLILMSATLRVEDFI---SGGRLFRNP---------PIIEVPTRQFPVTVHFSKRTEIV 218
L++I+ SATL+ EDF+ +G + P II + R +PV F + +
Sbjct: 169 LRIIVSSATLQAEDFLRYFAGDESQQGPNGEVGGNTGKIISIEGRMYPVDTLFLE-SAAE 227
Query: 219 DYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
+Y+ ++ K V IH + +G IL+F+TG+ E+E
Sbjct: 228 NYVERSVKTVFDIHLQEGEGDILIFLTGREEIE 260
Score = 41 (19.5 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 14/63 (22%), Positives = 24/63 (38%)
Query: 400 PEQCTELPPTPTPEQCPELSSPDVEKMG------DNKRAGVGALCVLPLYAMLPAAAQLR 453
P +C L EQ P+ + P++++ K G+ + PA +R
Sbjct: 369 PGKCFRLYTQHAYEQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIR 428
Query: 454 VFE 456
FE
Sbjct: 429 AFE 431
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 319 (117.4 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 82/233 (35%), Positives = 126/233 (54%)
Query: 19 VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGS 78
V+ ++ +++ RK LP + +++ + DN I+ GETG GKTTQ+ QFL+E GFG+
Sbjct: 343 VNETKHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGA 402
Query: 79 NRCSSRSGRI-GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVR-HDKKIGDSCSIKFM 136
N + RI TQPRRVA ++ AKRV+ E+ LG+EVG+ +R DK IK+M
Sbjct: 403 NIDKNGEKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYM 462
Query: 137 TDGILLRELKALYEKQQQLLRSGQCI---EPKDRVFPLKLIL---MSATLRVEDF----- 185
T+GILLRE+ A +L + CI E +R ++L + + +D
Sbjct: 463 TEGILLREILA-----DPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVT 517
Query: 186 ---ISGGRL---FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIH 232
++ R F P +P R FPV V F++ + DY+ A K+V++IH
Sbjct: 518 SATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRDVNM-DYVEMAVKQVLTIH 569
Score = 279 (103.3 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 65/193 (33%), Positives = 104/193 (53%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L + P+Y+ +P Q ++F R VVV+TN+AETSLT+ GIKYV+D G KVK YN
Sbjct: 615 LDIFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYN 674
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSS-AVFNNILPDFSCAEISKVPV 555
G+++ ++ IS YRLY+ A + + EI + +
Sbjct: 675 PKLGMDTLQVVPISLANADQRSGRAGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNL 734
Query: 556 DGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
++LL+KS+ ++ +++FPF PP L + L A+ ALD+ G LT LG +M +P+
Sbjct: 735 SNIMLLLKSLKVNDINSFPFLDPPPKDLLNCSLYDLWAIGALDNLGELTKLGHSMTQFPI 794
Query: 616 SPRHSRMLLTLIQ 628
P ++++L Q
Sbjct: 795 EPTLAKLILLSTQ 807
Score = 134 (52.2 bits), Expect = 4.4e-29, Sum P(3) = 4.4e-29
Identities = 34/97 (35%), Positives = 51/97 (52%)
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMS 230
LKLI+ SAT+ F + F P +P R FPV V F++ + DY+ A K+V++
Sbjct: 512 LKLIVTSATMNANRFT---KFFGVAPQFHIPGRTFPVEVFFNRDVNM-DYVEMAVKQVLT 567
Query: 231 IH--------KRLPQGGILVFVTGQREVEYLCSKLRK 259
IH G ILVF+TGQ ++E C +++
Sbjct: 568 IHLGRWNADNNNANDGDILVFMTGQEDIEITCDLIKE 604
Score = 44 (20.5 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 18/78 (23%), Positives = 36/78 (46%)
Query: 695 KRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVE--------FCNEYALHLKTM 746
K + E A ++ KF SD LT+ + ++ + + +CN+ L LK++
Sbjct: 833 KERANE-ADMAREKFIISESDHLTLLNVFNQWNINLNKFKGNYTKINNWCNKNFLQLKSL 891
Query: 747 EEMSKLRKQLLHLLFNQN 764
++ QL+ L+ +N
Sbjct: 892 YRAKDIKHQLM-LIMKKN 908
Score = 41 (19.5 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 17 IVVHVSRPNEVENNRKD--LPIVMMEQEIMEAVND 49
+ +H+ R N NN D + + M QE +E D
Sbjct: 566 LTIHLGRWNADNNNANDGDILVFMTGQEDIEITCD 600
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 388 (141.6 bits), Expect = 2.3e-48, Sum P(4) = 2.3e-48
Identities = 99/258 (38%), Positives = 147/258 (56%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
++ + R+ LPI ++QE++ + DNS VI+ GETG GKTTQ+ Q+L E G+
Sbjct: 526 AKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGY----- 580
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
+ G IG TQPRRVA ++ AKRV+ E+G+ LG+EVG+ +R + ++ IK+MTDGIL
Sbjct: 581 -TDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGIL 639
Query: 142 LRE-LKAL----Y------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE L+ Y E ++ L + G E R LKL++ SAT+ + F
Sbjct: 640 LRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFA 699
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
S F N PI +P R FPV + FSK T DY+ A K+ + +H G ILVF+ G
Sbjct: 700 S---FFGNVPIFHIPGRTFPVDILFSK-TPQEDYVEAAVKQALQVHLSGAPGDILVFMPG 755
Query: 247 QREVEYLCSKLRKASKQL 264
Q ++E ++ + ++L
Sbjct: 756 QEDIEVTSEQIVEHLEEL 773
Score = 158 (60.7 bits), Expect = 2.3e-48, Sum P(4) = 2.3e-48
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 410 PTPEQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVST 469
P E S VE + + ++A AL VLP+Y+ LP+ Q ++F+ +G R +V+T
Sbjct: 754 PGQEDIEVTSEQIVEHLEELEKAP--ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT 811
Query: 470 NVAETSLTIPGIKYVVDTGREKVK 493
N+AETSLT+ GI +V+D+G K+K
Sbjct: 812 NIAETSLTVDGIMFVIDSGYCKLK 835
Score = 73 (30.8 bits), Expect = 2.3e-48, Sum P(4) = 2.3e-48
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
KF+ P SD LT ++ + +CN++ +H K M ++ ++R QL ++ Q
Sbjct: 943 KFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQ 998
Score = 57 (25.1 bits), Expect = 2.3e-48, Sum P(4) = 2.3e-48
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 601 GRLTALGKAMAHYPMSPRHSRMLL 624
G LT+ G+ M +P+ P S+ML+
Sbjct: 880 GGLTSTGRQMVEFPLDPALSKMLI 903
Score = 45 (20.9 bits), Expect = 6.7e-32, Sum P(2) = 6.7e-32
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 359 DPVDVLKENWSLGS--LKLAFEVLSGKNASGPSSQMKLSTPAIPEQCTELPPTPTP 412
+ ++E +L L+ E +N G + K+ TP EQ L P TP
Sbjct: 1110 EEASAMEEEMALAEEQLRARREEQERRNPLGSARCTKIYTPGRKEQGEPLTPRRTP 1165
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 315 (115.9 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
Identities = 68/198 (34%), Positives = 110/198 (55%)
Query: 429 NKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTG 488
N G + C+LPL++ +P Q +VF+ V +G V++STN+AETS+TI + YV+D+
Sbjct: 675 NPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSC 734
Query: 489 REKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCA 548
++KVK + S N + +Y W SK C+ L S A F+ + +
Sbjct: 735 KQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLT-P 793
Query: 549 EISKVPVDGVVLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTAL 606
EI + P+ V L +K + + + +F PP + A++EAE L+ L+ALDSN LT L
Sbjct: 794 EIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPL 853
Query: 607 GKAMAHYPMSPRHSRMLL 624
G+ +A P+ PR +M++
Sbjct: 854 GRILAKLPIEPRLGKMMI 871
Score = 288 (106.4 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
Identities = 77/208 (37%), Positives = 122/208 (58%)
Query: 20 HVSRPN--EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFG 77
H+ PN +V +R+ LP+ E+EIM AV+++ VII G TGCGKTTQVPQ++ +
Sbjct: 374 HIQDPNIKQVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIR 433
Query: 78 SNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIG-DSCSIKFM 136
++R + + I VTQPRR++ ++ A+RVAFE G +GK G+ VR + + S+ F
Sbjct: 434 NDRAAQCN--IVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFC 491
Query: 137 TDGILLRELKA--------LYEK--QQQLLRSGQCIEPKD--RVFP-LKLILMSATLRVE 183
T G+LLR+L++ + ++ ++ + + +D + FP +++ILMSAT+
Sbjct: 492 TVGVLLRKLESGIRGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTS 551
Query: 184 DFISGGRLFRNPPIIEVPTRQFPVTVHF 211
F F N PIIEV R FPV ++
Sbjct: 552 MFCE---YFFNCPIIEVFGRTFPVQEYY 576
Score = 39 (18.8 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
Identities = 14/63 (22%), Positives = 28/63 (44%)
Query: 706 HAKFS-NPTSDVLTVAYALQCFELSK-----SPVEFCNEYALHLKTMEEMSKLRKQLLHL 759
H F+ N SD + + Q ++ ++ + FC L++ T+ + + QL +
Sbjct: 906 HRNFAGNRFSDHVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDI 965
Query: 760 LFN 762
L N
Sbjct: 966 LVN 968
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 303 (111.7 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 86/255 (33%), Positives = 137/255 (53%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
++ + RK LPI +I++A+ +N +I+ GETG GK+TQ+ Q+L+E +
Sbjct: 430 KIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKY------HMY 483
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLR-- 143
G I TQPRR+A +A A RVA E+ + +GKEVG+ +R K ++ I +MTDG+ LR
Sbjct: 484 GNIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLL 543
Query: 144 -------ELKALY--EKQQQLLRSGQCIEP--KDRV-FP--LKLILMSATLRVEDFISGG 189
++ L E ++ L + I P KD F +++++ SATL E IS
Sbjct: 544 LYNPTLEDISVLIIDEAHERALHT-DVILPIVKDICNFRENIRVVISSATLDAEK-IS-- 599
Query: 190 RLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQRE 249
F PI VP R++ V ++++ E +YI ++ IH +G ILVF+ GQ E
Sbjct: 600 TYFNCAPIFYVPGRKYNVDIYYTINNES-NYISAIVITILQIHITQGKGDILVFLPGQYE 658
Query: 250 VEYLCSKLRKASKQL 264
+E + +L +L
Sbjct: 659 IELVQQELENKLNEL 673
Score = 259 (96.2 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 57/163 (34%), Positives = 88/163 (53%)
Query: 463 RLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXX 522
R +++STN+ ETS+TI I YV+D+G K K YN +GIES SK
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 523 XXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVT 582
C+RL++ F + L D S EI + + ++LL+KS+ +D + NF F PP
Sbjct: 863 RKRDGKCFRLFTKKSFID-LSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 583 ALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLLT 625
+++ L +L AL+ G LT G+ MA +P + S+M+L+
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILS 964
Score = 73 (30.8 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERL 464
L +LP+Y+ LP Q R+FEDV E + +
Sbjct: 680 LVILPIYSSLPVEYQARIFEDVTEEDNM 707
Score = 49 (22.3 bits), Expect = 3.7e-45, Sum P(4) = 3.7e-45
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 267 NSSKENKGNQVVADSEPNATKDINMKEINEAFE 299
N+ K +K N V +S+ N ++ N + INE E
Sbjct: 759 NNDKNDKNN-VGNNSKMNVSQSKNKRNINEEIE 790
Score = 44 (20.5 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 724 QCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHL 759
QC E + S FC ++ L T+ ++ ++ QLL +
Sbjct: 1023 QCEENNFS-TSFCYDHFLQYHTLIKVKDVKTQLLSI 1057
Score = 39 (18.8 bits), Expect = 4.1e-20, Sum P(4) = 4.1e-20
Identities = 12/64 (18%), Positives = 29/64 (45%)
Query: 262 KQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDE-DQF 320
K++ + +K+ K + +S+ KD + + ++ + + D+ YD+ D+
Sbjct: 212 KKMNESPTKKKKKRKDDIESDNKCDKDEKYDKYGKFYKRDKHHKYDKHDKHDKYDKHDKH 271
Query: 321 DIDD 324
D D
Sbjct: 272 DKHD 275
Score = 37 (18.1 bits), Expect = 6.5e-20, Sum P(4) = 6.5e-20
Identities = 6/35 (17%), Positives = 19/35 (54%)
Query: 318 DQFDIDDNELDALSDSETESETEILGEDEKLVEQK 352
++ D+ ++ + E++ + + GE+ ++E K
Sbjct: 3 EKSDLHKRSIEFTDNDESKKKIKTDGEENDIMESK 37
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 303 (111.7 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 86/255 (33%), Positives = 137/255 (53%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
++ + RK LPI +I++A+ +N +I+ GETG GK+TQ+ Q+L+E +
Sbjct: 430 KIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKY------HMY 483
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLR-- 143
G I TQPRR+A +A A RVA E+ + +GKEVG+ +R K ++ I +MTDG+ LR
Sbjct: 484 GNIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLL 543
Query: 144 -------ELKALY--EKQQQLLRSGQCIEP--KDRV-FP--LKLILMSATLRVEDFISGG 189
++ L E ++ L + I P KD F +++++ SATL E IS
Sbjct: 544 LYNPTLEDISVLIIDEAHERALHT-DVILPIVKDICNFRENIRVVISSATLDAEK-IS-- 599
Query: 190 RLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQRE 249
F PI VP R++ V ++++ E +YI ++ IH +G ILVF+ GQ E
Sbjct: 600 TYFNCAPIFYVPGRKYNVDIYYTINNES-NYISAIVITILQIHITQGKGDILVFLPGQYE 658
Query: 250 VEYLCSKLRKASKQL 264
+E + +L +L
Sbjct: 659 IELVQQELENKLNEL 673
Score = 259 (96.2 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 57/163 (34%), Positives = 88/163 (53%)
Query: 463 RLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXX 522
R +++STN+ ETS+TI I YV+D+G K K YN +GIES SK
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 523 XXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVT 582
C+RL++ F + L D S EI + + ++LL+KS+ +D + NF F PP
Sbjct: 863 RKRDGKCFRLFTKKSFID-LSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 583 ALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLLT 625
+++ L +L AL+ G LT G+ MA +P + S+M+L+
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILS 964
Score = 73 (30.8 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERL 464
L +LP+Y+ LP Q R+FEDV E + +
Sbjct: 680 LVILPIYSSLPVEYQARIFEDVTEEDNM 707
Score = 49 (22.3 bits), Expect = 3.7e-45, Sum P(4) = 3.7e-45
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 267 NSSKENKGNQVVADSEPNATKDINMKEINEAFE 299
N+ K +K N V +S+ N ++ N + INE E
Sbjct: 759 NNDKNDKNN-VGNNSKMNVSQSKNKRNINEEIE 790
Score = 44 (20.5 bits), Expect = 1.2e-47, Sum P(4) = 1.2e-47
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 724 QCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHL 759
QC E + S FC ++ L T+ ++ ++ QLL +
Sbjct: 1023 QCEENNFS-TSFCYDHFLQYHTLIKVKDVKTQLLSI 1057
Score = 39 (18.8 bits), Expect = 4.1e-20, Sum P(4) = 4.1e-20
Identities = 12/64 (18%), Positives = 29/64 (45%)
Query: 262 KQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDE-DQF 320
K++ + +K+ K + +S+ KD + + ++ + + D+ YD+ D+
Sbjct: 212 KKMNESPTKKKKKRKDDIESDNKCDKDEKYDKYGKFYKRDKHHKYDKHDKHDKYDKHDKH 271
Query: 321 DIDD 324
D D
Sbjct: 272 DKHD 275
Score = 37 (18.1 bits), Expect = 6.5e-20, Sum P(4) = 6.5e-20
Identities = 6/35 (17%), Positives = 19/35 (54%)
Query: 318 DQFDIDDNELDALSDSETESETEILGEDEKLVEQK 352
++ D+ ++ + E++ + + GE+ ++E K
Sbjct: 3 EKSDLHKRSIEFTDNDESKKKIKTDGEENDIMESK 37
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 306 (112.8 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 86/252 (34%), Positives = 139/252 (55%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
+++ R LPI I++ + ++ V++ G+TGCGK+TQVPQ+L AGF C
Sbjct: 154 KLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVAC---- 209
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
TQPRR+A ++ AKRV FE G +VG+Q+R + + I F+T G+LLR++
Sbjct: 210 -----TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQI 264
Query: 146 K---AL--YEK------QQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGR 190
+ +L YE ++ L + + R+ P LK+ILMSAT+ + F S
Sbjct: 265 QREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSS--- 321
Query: 191 LFRNPPIIEVPTRQFPVTVHF--------SKRTEIVDYIGQAYKKVM-SI-HKRLPQ--G 238
F N P+++VP R FP+TV + + ++E +D + + +V+ SI HK P+ G
Sbjct: 322 YFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLD--PRPFLRVLESIDHKYPPEERG 379
Query: 239 GILVFVTGQREV 250
+LVF++G E+
Sbjct: 380 DLLVFLSGMAEI 391
Score = 280 (103.6 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 97/340 (28%), Positives = 161/340 (47%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL++ L A Q +VF+ G R ++STN+AETS+TI GI++VVD+G+ K Y+
Sbjct: 410 VLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQ 469
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ + WIS+ C+RLY+ + ++ P + EI +V +D +
Sbjct: 470 AKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAP-YPVPEIRRVALDSL 528
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
VL MKSM++ FPF PP +L A L+ ALDS+ LT +G +A P+
Sbjct: 529 VLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVV 588
Query: 619 HSRMLL-----TLIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQLE-G---TQTNS 669
+ML+ +L++ + + A L+ + G T N
Sbjct: 589 IGKMLILGSMFSLVEPVLTIAAALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNV 648
Query: 670 NDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSD--VLTVAYALQCFE 727
++ ++ + + CR+ + + +L E+A L +F D +L A A Q +
Sbjct: 649 FNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMANLRR-QFKELLEDHGLLAGAQAAQVGD 707
Query: 728 LSKSPVEFCNEY-ALH-LKTM-EEMSKLRKQLLHLLFNQN 764
S S ++ E ALH LK EE + R+++L L Q+
Sbjct: 708 -SYSRLQQRRERRALHQLKRQHEEGAGRRRKVLRLQEEQD 746
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 330 (121.2 bits), Expect = 2.0e-47, Sum P(4) = 2.0e-47
Identities = 79/214 (36%), Positives = 118/214 (55%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGA-LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNV 471
E+ + S +E+ R G+ L VLP+YA LP+ Q++VFE V R V+V+TNV
Sbjct: 254 EEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNV 313
Query: 472 AETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYR 531
AETS+TI GI YV+D G K++ YN IE + +S+ CYR
Sbjct: 314 AETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYR 373
Query: 532 LYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCL 591
LY+ F+ LP + E+ + + V+L +K++ ID V F F +PP ++V+A L
Sbjct: 374 LYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELL 432
Query: 592 KALEALDSNGRLTA-LGKAMAHYPMSPRHSRMLL 624
AL LD + RLT LG +A +P++P ++MLL
Sbjct: 433 YALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLL 466
Score = 144 (55.7 bits), Expect = 2.0e-47, Sum P(4) = 2.0e-47
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 69 QFLFEAGFGSNRCSSRSGRI-GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI 127
++L EAG+ + GR+ GVTQPRRVA + A RVA E G LG EVG+ +R D
Sbjct: 58 KYLAEAGW------TAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCT 111
Query: 128 GDSCS-IKFMTDGILLREL 145
+ IKF+TDG+L+RE+
Sbjct: 112 DQLATRIKFLTDGMLVREM 130
Score = 117 (46.2 bits), Expect = 2.0e-47, Sum P(4) = 2.0e-47
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 171 LKLILMSATL---RVEDFISGGRLFRNPP-----IIEVPTRQFPVTVHFSKRTEIVDYIG 222
L+LI+ SATL + DF + +P I+ V R FPV + F ++ + DYI
Sbjct: 171 LRLIVASATLDADKFRDFFNQNET-SDPARDTCVILTVEGRTFPVDI-FYLQSPVPDYIK 228
Query: 223 QAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKEN 272
+ V+ IH+ G +L F+TGQ EVE + S L + ++ L K +
Sbjct: 229 STVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRH 278
Score = 64 (27.6 bits), Expect = 2.0e-47, Sum P(4) = 2.0e-47
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 706 HAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
H KF+ D LT+ + F ++C E+ L+ K + + +R+QL LL
Sbjct: 504 HRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLL 558
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 334 (122.6 bits), Expect = 5.0e-47, Sum P(3) = 5.0e-47
Identities = 96/260 (36%), Positives = 139/260 (53%)
Query: 30 NRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIG 89
+R LPI +EQ++M + +I+ GETG GK+TQVPQ AG + SG I
Sbjct: 157 SRPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIAN------SGSIA 210
Query: 90 VTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE--LKA 147
VTQPRRVA ++ A RVA E+G ++G VG+ VR + I++MTDGI+LR+ +
Sbjct: 211 VTQPRRVAAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSP 270
Query: 148 LYEK---------QQQLLRSG--QCI------EPKDRVFPLKLILMSATLRVEDFISGGR 190
L +K ++ L S CI + ++ PL+LI+MSATL+ E F S
Sbjct: 271 LLDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQS--- 327
Query: 191 LFRNPPIIEVPTRQFPVTV-H----FSKRTEIVDYIGQAYKKVMSIHKRLPQG-GILVFV 244
F N ++ V R FP+ V H +K DY+ A V +H P+G ILVF+
Sbjct: 328 YFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKGRDILVFL 387
Query: 245 TGQREVEYLCSKLRKASKQL 264
TG E+E + S+L + + L
Sbjct: 388 TGSEEIEAVASQLAELNGSL 407
Score = 245 (91.3 bits), Expect = 5.0e-47, Sum P(3) = 5.0e-47
Identities = 63/214 (29%), Positives = 102/214 (47%)
Query: 417 ELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSL 476
E + + ++ + A L +PLYA L Q F +G R V++STN+AETS+
Sbjct: 394 EAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSV 453
Query: 477 TIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSA 536
TIPGI+ V+D+G+ K K++ + N I+ ++ +SK CYRLYS
Sbjct: 454 TIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSRE 513
Query: 537 VFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEV----TALVEAERCLK 592
F+ + + EI + + L + + + PPE AL+E L
Sbjct: 514 DFHKFEAE-NMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLELTS-LG 571
Query: 593 ALEALDSNGR---LTALGKAMAHYPMSPRHSRML 623
A+ ++S+ LT +G A YP+ P H+R+L
Sbjct: 572 AIRPVNSDRSKFALTEMGDAFCMYPLPPDHARIL 605
Score = 41 (19.5 bits), Expect = 5.0e-47, Sum P(3) = 5.0e-47
Identities = 8/37 (21%), Positives = 21/37 (56%)
Query: 727 ELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
E +++ +FCN+ ++ + ++ S + +QL + Q
Sbjct: 693 EYNQTIRKFCNDNMINEQHLKTASMIEEQLKQIAIEQ 729
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 388 (141.6 bits), Expect = 1.0e-46, Sum P(3) = 1.0e-46
Identities = 99/258 (38%), Positives = 147/258 (56%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
++ + R+ LPI ++QE++ + DNS VI+ GETG GKTTQ+ Q+L E G+
Sbjct: 523 AKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGY----- 577
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
+ G IG TQPRRVA ++ AKRV+ E+G+ LG+EVG+ +R + ++ IK+MTDGIL
Sbjct: 578 -TDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGIL 636
Query: 142 LRE-LKAL----Y------EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE L+ Y E ++ L + G E R LKL++ SAT+ + F
Sbjct: 637 LRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFA 696
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
S F N PI +P R FPV + FSK T DY+ A K+ + +H G ILVF+ G
Sbjct: 697 S---FFGNVPIFHIPGRTFPVDILFSK-TPQEDYVEAAVKQALQVHLSGAPGDILVFMPG 752
Query: 247 QREVEYLCSKLRKASKQL 264
Q ++E ++ + ++L
Sbjct: 753 QEDIEVTSEQIVEHLEEL 770
Score = 158 (60.7 bits), Expect = 1.0e-46, Sum P(3) = 1.0e-46
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 410 PTPEQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVST 469
P E S VE + + ++A AL VLP+Y+ LP+ Q ++F+ +G R +V+T
Sbjct: 751 PGQEDIEVTSEQIVEHLEELEKAP--ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT 808
Query: 470 NVAETSLTIPGIKYVVDTGREKVK 493
N+AETSLT+ GI +V+D+G K+K
Sbjct: 809 NIAETSLTVDGIMFVIDSGYCKLK 832
Score = 73 (30.8 bits), Expect = 1.0e-46, Sum P(3) = 1.0e-46
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
KF+ P SD LT ++ + +CN++ +H K M ++ ++R QL ++ Q
Sbjct: 937 KFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQ 992
Score = 55 (24.4 bits), Expect = 5.3e-36, Sum P(3) = 5.3e-36
Identities = 28/88 (31%), Positives = 42/88 (47%)
Query: 548 AEISKVPVDGVVLLMKSMNID-KVSN-FPFPTPPEVTALVEAERCLKALEALDS------ 599
AE S + VDG++ ++ S KVS F + + T L+E A L S
Sbjct: 811 AETS-LTVDGIMFVIDSGYCKLKVSKGFLYCSWISGTGLIEFYGSEPAFHWLQSALLLPF 869
Query: 600 --NGR-LTALGKAMAHYPMSPRHSRMLL 624
N R LT+ G+ M +P+ P S+ML+
Sbjct: 870 RFNPRGLTSTGRQMVEFPLDPALSKMLI 897
Score = 45 (20.9 bits), Expect = 6.5e-32, Sum P(2) = 6.5e-32
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 359 DPVDVLKENWSLGS--LKLAFEVLSGKNASGPSSQMKLSTPAIPEQCTELPPTPTP 412
+ ++E +L L+ E +N G + K+ TP EQ L P TP
Sbjct: 1104 EEASAMEEEMALAEEQLRARREEQERRNPLGSARCTKIYTPGRKEQGEPLTPRRTP 1159
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 298 (110.0 bits), Expect = 2.1e-46, Sum P(3) = 2.1e-46
Identities = 64/199 (32%), Positives = 107/199 (53%)
Query: 428 DNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDT 487
+N G +LPL++ +P Q +VF+ V +G V++STN+AETS+TI + YV+D+
Sbjct: 675 NNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDS 734
Query: 488 GREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSC 547
++KVK + + N + +Y W SK C+ L S A F+ L
Sbjct: 735 CKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDR-LETHMT 793
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTA 605
E+ + P+ + L +K + + + F PP + A++EAE L+ L+ALD+N LT
Sbjct: 794 PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTP 853
Query: 606 LGKAMAHYPMSPRHSRMLL 624
LG+ +A P+ PR +M++
Sbjct: 854 LGRILAKLPIEPRFGKMMI 872
Score = 279 (103.3 bits), Expect = 2.1e-46, Sum P(3) = 2.1e-46
Identities = 77/199 (38%), Positives = 115/199 (57%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
V R+ LP+ E EI+EA++ NS VII G TGCGKTTQVPQ++ + ++R + +
Sbjct: 384 VLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECN- 442
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIG-DSCSIKFMTDGILLREL 145
I VTQPRR++ +A A+RVA+E G GK G+ VR + + SI F T G+LLR+L
Sbjct: 443 -IVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL 501
Query: 146 KA--------LYEK--QQQLLRSGQCIEPKDRV--FP-LKLILMSATLRVEDFISGGRLF 192
+A + ++ ++ + + +D V +P ++++LMSAT+ F F
Sbjct: 502 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCE---YF 558
Query: 193 RNPPIIEVPTRQFPVTVHF 211
N PIIEV R FPV +F
Sbjct: 559 FNCPIIEVYGRTFPVQEYF 577
Score = 47 (21.6 bits), Expect = 2.1e-46, Sum P(3) = 2.1e-46
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 706 HAKFS-NPTSDVLTVAYALQCFE---LS--KSPVEFCNEYALHLKTMEEMSKLRKQLLHL 759
H F+ N SD + + Q ++ +S ++ + FC + L++ T+ + + QL +
Sbjct: 907 HRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEI 966
Query: 760 LFN 762
L N
Sbjct: 967 LIN 969
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 320 (117.7 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 83/259 (32%), Positives = 140/259 (54%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
+K LPI +++ AV N I+ G TGCGKTTQ+PQFL+EAG+ +S++G IG
Sbjct: 22 KKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGW-----ASQNGIIGC 76
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL--KAL 148
TQPRR+ + ++RV+ EL G G+ ++ D + + IK+MTDGILL E+ L
Sbjct: 77 TQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPL 136
Query: 149 YEK---------QQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGRLFRNP 195
E+ ++ L + + R+ +L+L SA++ + F
Sbjct: 137 LERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKL---SQFFGQD 193
Query: 196 PI--IEVPTRQFPV-TVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEY 252
+ + + + FPV T+ K TE +Y+ A + V++I+ P G ILVF++G++E+EY
Sbjct: 194 KVCTMSIEGKLFPVETLFLQKPTE--NYVDSAIETVININSTYPPGDILVFLSGRKEIEY 251
Query: 253 LCSKLRKASKQLLVNSSKE 271
K+ + L+++S++
Sbjct: 252 CIKKIEDS----LIHASED 266
Score = 219 (82.2 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 63/191 (32%), Positives = 94/191 (49%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGE-RLVVVSTNVAETSLTIPGIKYVVDTGREKVKKY 495
L LPL+A L Q+RVF ++ +G+ R V+ STN+AETS+TI GI YVVD+G K + Y
Sbjct: 270 LVPLPLHAGLTVDEQMRVF-NIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIY 328
Query: 496 NSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPV 555
N ISK +RLY+ ++ + +F A+I +
Sbjct: 329 NPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEFE-ADILNCDM 387
Query: 556 DGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLT-ALGKAMAHYP 614
+VL +K + + + FPF P L+ A L L LD +G LT LG +++
Sbjct: 388 SPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSF 447
Query: 615 MSPRHSRMLLT 625
+ S+ LLT
Sbjct: 448 LDANISKALLT 458
Score = 67 (28.6 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
K A ++H+ F D++T + F +K +++C + L+ +T+ + +R L+
Sbjct: 489 KNDAFVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVR 548
Query: 759 LL 760
L
Sbjct: 549 FL 550
Score = 43 (20.2 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 14/57 (24%), Positives = 20/57 (35%)
Query: 505 EIQWISKXXXXXXXXXXXXXXXXHCYRLYS--SAVFNNILPDFSCAEISKVPVDGVV 559
++QW K H R + S LP C++I K +DG V
Sbjct: 522 DLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSIPTAQRLPSSDCSKILKCLLDGFV 578
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 300 (110.7 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 75/264 (28%), Positives = 126/264 (47%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+L LY+ LP Q +FE V R V++STN+AETS+TIP IKYV+D+G+ K+K ++
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
G + ISK YR+Y+ + N+ P F EI + + +
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNP-FLIPEIFRSDLTQI 520
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
L +K+MNI+ F FP P V + + L + A+D N LT LGK + +P++P
Sbjct: 521 YLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPI 580
Query: 619 HSRMLLTLIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQ---LEGTQTNSNDSELE 675
++ +LL I+ + A L L+ + N+ ++
Sbjct: 581 YANILLCSIEFNCIDEIATIVALLNCDSIFLNYNFYEDLDTLNNDSLDKKKNNNEQKKIV 640
Query: 676 ERDNALDSEDPMCRQEKLGKRKLK 699
++++ DS++ + + E K+K K
Sbjct: 641 QKNSVEDSKENINKLENYDKKKGK 664
Score = 199 (75.1 bits), Expect = 7.0e-45, Sum P(3) = 7.0e-45
Identities = 82/263 (31%), Positives = 127/263 (48%)
Query: 90 VTQPRRVAVLATAKRVAFELGL-HLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK-- 146
++ PRRVA + A+RV+ E+ +G VG+ +R D IKF+TDGIL+RE+
Sbjct: 74 ISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMND 133
Query: 147 ALYEKQQQLL------RS--GQCIEPKDRVF-----PLKLILMSATLRVEDFISGGRLFR 193
L +K + L+ RS + ++ +K+ILMSAT + F + F
Sbjct: 134 PLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIF---NQFFN 190
Query: 194 NPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIH-KRLPQGGILVFVTGQREVE- 251
NPPII +P + +T+++ +R I DYI ++ IH RE +
Sbjct: 191 NPPIITIPHKLHKITIYYPRRN-IEDYILSVVSTILQIHFGNTSYSSEFENDDDHRENKP 249
Query: 252 YLCSKLRKASKQLLVNSSKE-NKGNQVVADS-EPNATKDINMKEINEAFEIQGYSTEQQT 309
++L K+++Q +N S E NK + DS E N T DIN EI+E +Q T
Sbjct: 250 NELNELNKSNEQNELNESNEVNKEH----DSYESNKTHDIN--EIDEQNNLQ-------T 296
Query: 310 DRFSSYDEDQFDIDDNELDALSD 332
D S + ++ DI E +L D
Sbjct: 297 DNISMNNINE-DIKKTEDKSLGD 318
Score = 195 (73.7 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 47/129 (36%), Positives = 71/129 (55%)
Query: 32 KDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN------------ 79
++LPI+ + EI + + N+ +II GETGCGKTTQVPQ + E F
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEKKYDNIKHKND 61
Query: 80 --RCSSRSGRIGVTQPRRVAVLATAKRVAFELGL-HLGKEVGFQVRHDKKIGDSCSIKFM 136
+ ++ ++ PRRVA + A+RV+ E+ +G VG+ +R D IKF+
Sbjct: 62 EKKKRKEKKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFV 121
Query: 137 TDGILLREL 145
TDGIL+RE+
Sbjct: 122 TDGILIREI 130
Score = 104 (41.7 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 27/96 (28%), Positives = 53/96 (55%)
Query: 671 DSELEERDNALDSEDPMCRQEKLG-KRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELS 729
D + ++ DN ++ D ++K+ K KL VA+ K +P D LT+ + ++ +
Sbjct: 672 DDDHDDNDNDSNNNDDDMGEKKMNDKNKLINVAR---RKLIHPDGDHLTLLHIFYLWQEA 728
Query: 730 --KSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
K FCN YAL+ + ++++ K++ QLL ++ N+
Sbjct: 729 DIKEKKHFCNIYALNNEILQQVEKIKIQLLEIMKNK 764
Score = 59 (25.8 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 23/109 (21%), Positives = 51/109 (46%)
Query: 247 QREVE-YLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYST 305
+R +E Y+ S + S L ++ + ++ D + K + E+N++ E +
Sbjct: 210 RRNIEDYILSVV---STILQIHFGNTSYSSEFENDDDHRENKPNELNELNKSNEQNELNE 266
Query: 306 EQQTDR-FSSYDEDQFDIDDNELDALSDSETES-ETEILGEDEKLVEQK 352
+ ++ SY+ ++ D NE+D ++ +T++ + ED K E K
Sbjct: 267 SNEVNKEHDSYESNKTH-DINEIDEQNNLQTDNISMNNINEDIKKTEDK 314
Score = 54 (24.1 bits), Expect = 9.1e-46, Sum P(4) = 9.1e-46
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 238 GGILVFVTGQREVEY----LCSKLRKASKQLLVNSSKENKGN 275
G ILVF+ GQ E+E L KL+ K L+N + + N
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLKIIYKGNLLNKLMKERNN 358
Score = 43 (20.2 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 280 DSEPNATKDINMKEINEAFEI-QGYSTEQQTDRFSSYDE-DQFDIDDNELDALSDSETES 337
D+ N + D K NE +I Q S E + + + D+ +N L+ D ++
Sbjct: 620 DTLNNDSLD-KKKNNNEQKKIVQKNSVEDSKENINKLENYDKKKGKNNNLEPYDDDHDDN 678
Query: 338 ETEILGEDEKLVEQK 352
+ + D+ + E+K
Sbjct: 679 DNDSNNNDDDMGEKK 693
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 300 (110.7 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 75/264 (28%), Positives = 126/264 (47%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+L LY+ LP Q +FE V R V++STN+AETS+TIP IKYV+D+G+ K+K ++
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
G + ISK YR+Y+ + N+ P F EI + + +
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNP-FLIPEIFRSDLTQI 520
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
L +K+MNI+ F FP P V + + L + A+D N LT LGK + +P++P
Sbjct: 521 YLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPI 580
Query: 619 HSRMLLTLIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQ---LEGTQTNSNDSELE 675
++ +LL I+ + A L L+ + N+ ++
Sbjct: 581 YANILLCSIEFNCIDEIATIVALLNCDSIFLNYNFYEDLDTLNNDSLDKKKNNNEQKKIV 640
Query: 676 ERDNALDSEDPMCRQEKLGKRKLK 699
++++ DS++ + + E K+K K
Sbjct: 641 QKNSVEDSKENINKLENYDKKKGK 664
Score = 199 (75.1 bits), Expect = 7.0e-45, Sum P(3) = 7.0e-45
Identities = 82/263 (31%), Positives = 127/263 (48%)
Query: 90 VTQPRRVAVLATAKRVAFELGL-HLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK-- 146
++ PRRVA + A+RV+ E+ +G VG+ +R D IKF+TDGIL+RE+
Sbjct: 74 ISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMND 133
Query: 147 ALYEKQQQLL------RS--GQCIEPKDRVF-----PLKLILMSATLRVEDFISGGRLFR 193
L +K + L+ RS + ++ +K+ILMSAT + F + F
Sbjct: 134 PLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIF---NQFFN 190
Query: 194 NPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIH-KRLPQGGILVFVTGQREVE- 251
NPPII +P + +T+++ +R I DYI ++ IH RE +
Sbjct: 191 NPPIITIPHKLHKITIYYPRRN-IEDYILSVVSTILQIHFGNTSYSSEFENDDDHRENKP 249
Query: 252 YLCSKLRKASKQLLVNSSKE-NKGNQVVADS-EPNATKDINMKEINEAFEIQGYSTEQQT 309
++L K+++Q +N S E NK + DS E N T DIN EI+E +Q T
Sbjct: 250 NELNELNKSNEQNELNESNEVNKEH----DSYESNKTHDIN--EIDEQNNLQ-------T 296
Query: 310 DRFSSYDEDQFDIDDNELDALSD 332
D S + ++ DI E +L D
Sbjct: 297 DNISMNNINE-DIKKTEDKSLGD 318
Score = 195 (73.7 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 47/129 (36%), Positives = 71/129 (55%)
Query: 32 KDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN------------ 79
++LPI+ + EI + + N+ +II GETGCGKTTQVPQ + E F
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEKKYDNIKHKND 61
Query: 80 --RCSSRSGRIGVTQPRRVAVLATAKRVAFELGL-HLGKEVGFQVRHDKKIGDSCSIKFM 136
+ ++ ++ PRRVA + A+RV+ E+ +G VG+ +R D IKF+
Sbjct: 62 EKKKRKEKKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFV 121
Query: 137 TDGILLREL 145
TDGIL+RE+
Sbjct: 122 TDGILIREI 130
Score = 104 (41.7 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 27/96 (28%), Positives = 53/96 (55%)
Query: 671 DSELEERDNALDSEDPMCRQEKLG-KRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELS 729
D + ++ DN ++ D ++K+ K KL VA+ K +P D LT+ + ++ +
Sbjct: 672 DDDHDDNDNDSNNNDDDMGEKKMNDKNKLINVAR---RKLIHPDGDHLTLLHIFYLWQEA 728
Query: 730 --KSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
K FCN YAL+ + ++++ K++ QLL ++ N+
Sbjct: 729 DIKEKKHFCNIYALNNEILQQVEKIKIQLLEIMKNK 764
Score = 59 (25.8 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 23/109 (21%), Positives = 51/109 (46%)
Query: 247 QREVE-YLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYST 305
+R +E Y+ S + S L ++ + ++ D + K + E+N++ E +
Sbjct: 210 RRNIEDYILSVV---STILQIHFGNTSYSSEFENDDDHRENKPNELNELNKSNEQNELNE 266
Query: 306 EQQTDR-FSSYDEDQFDIDDNELDALSDSETES-ETEILGEDEKLVEQK 352
+ ++ SY+ ++ D NE+D ++ +T++ + ED K E K
Sbjct: 267 SNEVNKEHDSYESNKTH-DINEIDEQNNLQTDNISMNNINEDIKKTEDK 314
Score = 54 (24.1 bits), Expect = 9.1e-46, Sum P(4) = 9.1e-46
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 238 GGILVFVTGQREVEY----LCSKLRKASKQLLVNSSKENKGN 275
G ILVF+ GQ E+E L KL+ K L+N + + N
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLKIIYKGNLLNKLMKERNN 358
Score = 43 (20.2 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 280 DSEPNATKDINMKEINEAFEI-QGYSTEQQTDRFSSYDE-DQFDIDDNELDALSDSETES 337
D+ N + D K NE +I Q S E + + + D+ +N L+ D ++
Sbjct: 620 DTLNNDSLD-KKKNNNEQKKIVQKNSVEDSKENINKLENYDKKKGKNNNLEPYDDDHDDN 678
Query: 338 ETEILGEDEKLVEQK 352
+ + D+ + E+K
Sbjct: 679 DNDSNNNDDDMGEKK 693
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 311 (114.5 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 86/258 (33%), Positives = 137/258 (53%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
SR +++ R+ LP+ ++EIM + N ++ GETG GK+TQ+PQF+ E + + +
Sbjct: 69 SRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKK- 127
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
G I VTQPRRVA + A RVA E G LG++VG+ VR D +K++TDG+L
Sbjct: 128 ---HGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGML 184
Query: 142 LRELKALYE-KQQQLLRSGQCIEPK---DRVF---------P---LKLILMSATLRVEDF 185
LREL + ++ ++ + E D + P L++I+MSATL+ E F
Sbjct: 185 LRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKF 244
Query: 186 ISGGRLFRNPPIIEVPTRQFPVTVHFSKR-TEIVDYIGQAYKKVMSIHKRLPQGGILVFV 244
F N PI+ V R+F V ++ K T+ D + + + I++ G IL F+
Sbjct: 245 ---SEFFNNAPILFVEGRKFDVKQYYLKAPTD--DIVDAVIRCCIQINQGEELGDILCFL 299
Query: 245 TGQREVEYLCSKLRKASK 262
GQ E++ + + K +K
Sbjct: 300 PGQEEIDKAVTIMEKIAK 317
Score = 256 (95.2 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 68/193 (35%), Positives = 100/193 (51%)
Query: 432 AGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREK 491
A V + PLYA LPA Q VF +K +R VV STN+AETS+TI G+K+VVD+G K
Sbjct: 323 APVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRK 382
Query: 492 VKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEIS 551
VK + G+ + IS+ +RLY + + LP S EI+
Sbjct: 383 VKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVK-LPKQSEPEIA 441
Query: 552 KVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
+ V VL++K +D + N+ + P A+V + L L ALD+ G++T G+ MA
Sbjct: 442 RSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRGQQMA 501
Query: 612 HYPMSPRHSRMLL 624
P+ P S +L+
Sbjct: 502 LLPLQPHLSSVLI 514
Score = 51 (23.0 bits), Expect = 9.8e-25, Sum P(2) = 9.8e-25
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 331 SDSETESETEILGEDEKLVEQ--KCPMDGDDPVDVLKENWSLGSLKLAFEVLS-GKNAS- 386
S SE + E++ +GED +L+ + KC + G +K N ++G ++ +S G+ S
Sbjct: 624 SISEEDEESKKIGEDGELISKILKCFLTG-----FIK-NTAIGMPDRSYRTVSTGEPISI 677
Query: 387 GPSSQ--MKLSTPAI 399
PSS M S P I
Sbjct: 678 HPSSMLFMNKSCPGI 692
Score = 41 (19.5 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 13/59 (22%), Positives = 25/59 (42%)
Query: 453 RVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISK 511
R + V GE + + +++ + + PGI Y K Y A + E+ W+ +
Sbjct: 664 RSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYVFT--TKGY--ARNVSRIELSWLQE 718
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 299 (110.3 bits), Expect = 3.3e-46, Sum P(3) = 3.3e-46
Identities = 64/199 (32%), Positives = 107/199 (53%)
Query: 428 DNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDT 487
+N G +LPL++ +P Q +VF+ V +G V++STN+AETS+TI + YV+D+
Sbjct: 674 NNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDS 733
Query: 488 GREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSC 547
++KVK + + N + +Y W SK C+ L S A F+ L
Sbjct: 734 CKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDR-LETHMT 792
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTA 605
E+ + P+ + L +K + + + F PP + A++EAE L+ L+ALD+N LT
Sbjct: 793 PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLRELDALDANDELTP 852
Query: 606 LGKAMAHYPMSPRHSRMLL 624
LG+ +A P+ PR +M++
Sbjct: 853 LGRILAKLPIEPRFGKMMI 871
Score = 279 (103.3 bits), Expect = 3.3e-46, Sum P(3) = 3.3e-46
Identities = 77/199 (38%), Positives = 115/199 (57%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
V R+ LP+ E EI+EA++ NS VII G TGCGKTTQVPQ++ + ++R + +
Sbjct: 383 VLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECN- 441
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIG-DSCSIKFMTDGILLREL 145
I VTQPRR++ +A A+RVA+E G GK G+ VR + + SI F T G+LLR+L
Sbjct: 442 -IVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL 500
Query: 146 KA--------LYEK--QQQLLRSGQCIEPKDRV--FP-LKLILMSATLRVEDFISGGRLF 192
+A + ++ ++ + + +D V +P ++++LMSAT+ F F
Sbjct: 501 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCE---YF 557
Query: 193 RNPPIIEVPTRQFPVTVHF 211
N PIIEV R FPV +F
Sbjct: 558 FNCPIIEVYGRTFPVQEYF 576
Score = 47 (21.6 bits), Expect = 3.3e-46, Sum P(3) = 3.3e-46
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 706 HAKFS-NPTSDVLTVAYALQCFE---LS--KSPVEFCNEYALHLKTMEEMSKLRKQLLHL 759
H F+ N SD + + Q ++ +S ++ + FC + L++ T+ + + QL +
Sbjct: 906 HRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEI 965
Query: 760 LFN 762
L N
Sbjct: 966 LIN 968
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 304 (112.1 bits), Expect = 3.8e-46, Sum P(2) = 3.8e-46
Identities = 89/246 (36%), Positives = 125/246 (50%)
Query: 33 DLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQ 92
+LP+ +Q+I+EA+ D+ VI+ GETG GKTTQ+P+ E G G G IG TQ
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIK------GLIGHTQ 129
Query: 93 PRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA--LYE 150
PRR+A A R+A EL G +G++VR + D+ +K MTDGILL E++ L
Sbjct: 130 PRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLM 189
Query: 151 KQQQLL------RS-------GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPI 197
+ ++ RS G E R LK+I+ SAT+ E F R F N PI
Sbjct: 190 QYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERF---SRHFNNAPI 246
Query: 198 IEVPTRQFPVTVHFSKRTEIVDYIGQ-AYKKVMSIHKRLPQ---GGILVFVTGQREVEYL 253
IEV R +PV V + E D + + + L Q G IL+F++G+RE+
Sbjct: 247 IEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDT 306
Query: 254 CSKLRK 259
L K
Sbjct: 307 ADALNK 312
Score = 271 (100.5 bits), Expect = 3.8e-46, Sum P(2) = 3.8e-46
Identities = 65/191 (34%), Positives = 106/191 (55%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPLYA L + Q RVF+ G R +V++TNVAETSLT+PGIKYV+D G ++ +Y+
Sbjct: 320 ILPLYARLSNSEQNRVFQS-HSGRR-IVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ I+ IS+ C RLYS F + P+F+ EI + + V
Sbjct: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS-RPEFTDPEILRTNLASV 436
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNG-----RLTALGKAMAHY 613
+L M ++ + ++ FPF P+ + + R L+ L A+ ++ +LT LG+ ++
Sbjct: 437 ILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQL 496
Query: 614 PMSPRHSRMLL 624
P+ PR +RM+L
Sbjct: 497 PVDPRLARMVL 507
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 301 (111.0 bits), Expect = 7.9e-46, Sum P(2) = 7.9e-46
Identities = 94/250 (37%), Positives = 128/250 (51%)
Query: 29 NNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRI 88
N +LP+ M ++I +A++ N VII GETG GKTTQ+P+ E G GS G I
Sbjct: 71 NYPDNLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSR------GFI 124
Query: 89 GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA- 147
G TQPRR+A + A RVA EL LG+ VGF+VR + IK MTDGILL EL +
Sbjct: 125 GHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSD 184
Query: 148 LYEKQQQLLRSGQCIEPK---DRVF----------P-LKLILMSATLRVEDFISGGRLFR 193
Y Q + + E D + P LK+I+ SAT+ VE F + F
Sbjct: 185 RYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERF---SKHFN 241
Query: 194 NPPIIEVPTRQFPVTVHFS---KRTEI-VDYIGQAYKKVMSIHKRLPQGGILVFVTGQRE 249
N PIIEV R +PV + + TE +D I + V + G IL+F+ G+RE
Sbjct: 242 NAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDELVAE-GLGDILIFMNGERE 300
Query: 250 VEYLCSKLRK 259
+ +L +
Sbjct: 301 IRDTAEQLNR 310
Score = 271 (100.5 bits), Expect = 7.9e-46, Sum P(2) = 7.9e-46
Identities = 65/189 (34%), Positives = 103/189 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPLYA L Q +VF G R +V++TNVAETSLT+PGI+YV+D G ++ +Y+
Sbjct: 318 ILPLYARLSYGEQSKVFSS-HTGRR-IVLATNVAETSLTVPGIRYVIDPGTARISRYSYR 375
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ I+ IS+ C RLY A FNN P F+ EI + + V
Sbjct: 376 TKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNN-RPAFTDPEILRTNLASV 434
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEAL-DSNGR--LTALGKAMAHYPM 615
+L M ++ + ++ FPF PP+ + + L+ L+A+ G LT LG+ ++ P+
Sbjct: 435 ILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPLGRQLSQIPV 494
Query: 616 SPRHSRMLL 624
PR +RM++
Sbjct: 495 DPRLARMVI 503
Score = 38 (18.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 360 PVDVLKENWSLGSLKLAFEVLSGKNASGPSSQMKLSTPA 398
PVD ++ + S+ + L+ + A P SQ TPA
Sbjct: 1219 PVDPTRDRLHMQSITKVQDALAAQLAKVPRSQ---PTPA 1254
Score = 37 (18.1 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 320 FDIDDNELDALSDSET-ES-ETEILGEDEKLVEQKCPMDGDDPVDVLKENWSLGSLKLAF 377
F I+D++ ++ +S + E+ G K + Q G + + L E WS G L F
Sbjct: 968 FKIEDDKGKLVAQGRVLDSLKAELQGVVAKAIRQVANK-GIEK-EALTE-WSFGDLPKQF 1024
Query: 378 EVLSG 382
E G
Sbjct: 1025 EQRKG 1029
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 301 (111.0 bits), Expect = 7.9e-46, Sum P(2) = 7.9e-46
Identities = 94/250 (37%), Positives = 128/250 (51%)
Query: 29 NNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRI 88
N +LP+ M ++I +A++ N VII GETG GKTTQ+P+ E G GS G I
Sbjct: 71 NYPDNLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSR------GFI 124
Query: 89 GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA- 147
G TQPRR+A + A RVA EL LG+ VGF+VR + IK MTDGILL EL +
Sbjct: 125 GHTQPRRLAARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSD 184
Query: 148 LYEKQQQLLRSGQCIEPK---DRVF----------P-LKLILMSATLRVEDFISGGRLFR 193
Y Q + + E D + P LK+I+ SAT+ VE F + F
Sbjct: 185 RYLDQYDTIIIDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERF---SKHFN 241
Query: 194 NPPIIEVPTRQFPVTVHFS---KRTEI-VDYIGQAYKKVMSIHKRLPQGGILVFVTGQRE 249
N PIIEV R +PV + + TE +D I + V + G IL+F+ G+RE
Sbjct: 242 NAPIIEVSGRTYPVETRYRPLVQDTEADLDQIEGIFAAVDELVAE-GLGDILIFMNGERE 300
Query: 250 VEYLCSKLRK 259
+ +L +
Sbjct: 301 IRDTAEQLNR 310
Score = 271 (100.5 bits), Expect = 7.9e-46, Sum P(2) = 7.9e-46
Identities = 65/189 (34%), Positives = 103/189 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPLYA L Q +VF G R +V++TNVAETSLT+PGI+YV+D G ++ +Y+
Sbjct: 318 ILPLYARLSYGEQSKVFSS-HTGRR-IVLATNVAETSLTVPGIRYVIDPGTARISRYSYR 375
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ I+ IS+ C RLY A FNN P F+ EI + + V
Sbjct: 376 TKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNN-RPAFTDPEILRTNLASV 434
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEAL-DSNGR--LTALGKAMAHYPM 615
+L M ++ + ++ FPF PP+ + + L+ L+A+ G LT LG+ ++ P+
Sbjct: 435 ILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPLGRQLSQIPV 494
Query: 616 SPRHSRMLL 624
PR +RM++
Sbjct: 495 DPRLARMVI 503
Score = 38 (18.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 360 PVDVLKENWSLGSLKLAFEVLSGKNASGPSSQMKLSTPA 398
PVD ++ + S+ + L+ + A P SQ TPA
Sbjct: 1219 PVDPTRDRLHMQSITKVQDALAAQLAKVPRSQ---PTPA 1254
Score = 37 (18.1 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 320 FDIDDNELDALSDSET-ES-ETEILGEDEKLVEQKCPMDGDDPVDVLKENWSLGSLKLAF 377
F I+D++ ++ +S + E+ G K + Q G + + L E WS G L F
Sbjct: 968 FKIEDDKGKLVAQGRVLDSLKAELQGVVAKAIRQVANK-GIEK-EALTE-WSFGDLPKQF 1024
Query: 378 EVLSG 382
E G
Sbjct: 1025 EQRKG 1029
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 291 (107.5 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 62/188 (32%), Positives = 102/188 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPL++ +P Q +VF+ V G V++STN+AETS+TI + YV+D+ ++KVK + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + +Y W SK C+ L S A F L E+ + P+ +
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFER-LETHMTPEMFRTPLHEI 801
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + + F PP + A++EAE L+ L+ALD+N LT LG+ +A P+
Sbjct: 802 ALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 617 PRHSRMLL 624
PR +M++
Sbjct: 862 PRFGKMMI 869
Score = 283 (104.7 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 78/223 (34%), Positives = 125/223 (56%)
Query: 6 PSSLQRPLAAPIVVHVSRPNEVE---NNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCG 62
P + L ++ + + ++++ R+ LP+ E EI+EA++ NS VII G TGCG
Sbjct: 357 PEQISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCG 416
Query: 63 KTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVR 122
KTTQVPQF+ + ++R + + I VTQPRR++ ++ A+RVAFE G GK G+ VR
Sbjct: 417 KTTQVPQFILDDFIQNDRAAECN--IVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVR 474
Query: 123 HDKKIG-DSCSIKFMTDGILLRELKA--------LYEK--QQQLLRSGQCIEPKDRV--F 169
+ + SI F T G+LLR+L+A + ++ ++ + + +D V +
Sbjct: 475 FESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAY 534
Query: 170 P-LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHF 211
P ++++LMSAT+ F F N PIIEV R +PV +F
Sbjct: 535 PEVRIVLMSATIDTSMFCE---YFFNCPIIEVYGRTYPVQEYF 574
Score = 44 (20.5 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 14/63 (22%), Positives = 29/63 (46%)
Query: 706 HAKFS-NPTSDVLTVAYALQCFELSK-----SPVEFCNEYALHLKTMEEMSKLRKQLLHL 759
H F+ N SD + + Q ++ ++ + + FC L++ T+ + + QL +
Sbjct: 904 HRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEI 963
Query: 760 LFN 762
L N
Sbjct: 964 LIN 966
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 291 (107.5 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 62/188 (32%), Positives = 102/188 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPL++ +P Q +VF+ V G V++STN+AETS+TI + YV+D+ ++KVK + +
Sbjct: 683 ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 742
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + +Y W SK C+ L S A F L E+ + P+ +
Sbjct: 743 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFER-LETHMTPEMFRTPLHEI 801
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + + F PP + A++EAE L+ L+ALD+N LT LG+ +A P+
Sbjct: 802 ALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 861
Query: 617 PRHSRMLL 624
PR +M++
Sbjct: 862 PRFGKMMI 869
Score = 283 (104.7 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 78/223 (34%), Positives = 125/223 (56%)
Query: 6 PSSLQRPLAAPIVVHVSRPNEVE---NNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCG 62
P + L ++ + + ++++ R+ LP+ E EI+EA++ NS VII G TGCG
Sbjct: 357 PEQISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCG 416
Query: 63 KTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVR 122
KTTQVPQF+ + ++R + + I VTQPRR++ ++ A+RVAFE G GK G+ VR
Sbjct: 417 KTTQVPQFILDDFIQNDRAAECN--IVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVR 474
Query: 123 HDKKIG-DSCSIKFMTDGILLRELKA--------LYEK--QQQLLRSGQCIEPKDRV--F 169
+ + SI F T G+LLR+L+A + ++ ++ + + +D V +
Sbjct: 475 FESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAY 534
Query: 170 P-LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHF 211
P ++++LMSAT+ F F N PIIEV R +PV +F
Sbjct: 535 PEVRIVLMSATIDTSMFCE---YFFNCPIIEVYGRTYPVQEYF 574
Score = 44 (20.5 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 14/63 (22%), Positives = 29/63 (46%)
Query: 706 HAKFS-NPTSDVLTVAYALQCFELSK-----SPVEFCNEYALHLKTMEEMSKLRKQLLHL 759
H F+ N SD + + Q ++ ++ + + FC L++ T+ + + QL +
Sbjct: 904 HRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEI 963
Query: 760 LFN 762
L N
Sbjct: 964 LIN 966
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 296 (109.3 bits), Expect = 2.7e-45, Sum P(3) = 2.7e-45
Identities = 82/252 (32%), Positives = 138/252 (54%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
+++ R LPI I++ + ++ V++ G+TGCGK+TQVPQ+L AGF C
Sbjct: 156 KLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVAC---- 211
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
TQPRR+A ++ AKRV FE G +VG+Q+R + + I F+T G+LLR++
Sbjct: 212 -----TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQI 266
Query: 146 K---AL--Y------EKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGR 190
+ +L Y E ++ L + + R+ P LK+ILMSAT+ + F S
Sbjct: 267 QREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSS--- 323
Query: 191 LFRNPPIIEVPTRQFPVTVHF--------SKRTEIVDYIGQAYKKVM-SIHKRLP---QG 238
F + P+++VP R FP+TV + + ++E +D + + +V+ +I + P +G
Sbjct: 324 YFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLD--PRPFLRVLEAIDNKYPPEERG 381
Query: 239 GILVFVTGQREV 250
+LVF++G E+
Sbjct: 382 DLLVFLSGMAEI 393
Score = 277 (102.6 bits), Expect = 2.7e-45, Sum P(3) = 2.7e-45
Identities = 64/186 (34%), Positives = 101/186 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL++ L + Q +VF+ G R ++STN+AETS+TI GI++VVD+G+ K Y+
Sbjct: 412 VLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQ 471
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ + WIS+ CYRLY+ + ++ P + EI +V +D +
Sbjct: 472 AKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAP-YPVPEIRRVALDAL 530
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
VL MKSM++ FPF PP ++ A L+ ALDS+ LT +G +A P+
Sbjct: 531 VLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVV 590
Query: 619 HSRMLL 624
+ML+
Sbjct: 591 IGKMLI 596
Score = 40 (19.1 bits), Expect = 2.7e-45, Sum P(3) = 2.7e-45
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 727 ELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
E S + ++C + + EM+ LR+Q LL
Sbjct: 660 ERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELL 693
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 294 (108.6 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 82/251 (32%), Positives = 137/251 (54%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
++++ R LPI I++ + ++ V++ G+TGCGK+TQVPQ+L AGF C
Sbjct: 153 KLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVAC---- 208
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
TQPRR+A ++ AKRV+FE G +VG+Q+R + + I F+T G+LLR++
Sbjct: 209 -----TQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQI 263
Query: 146 K---AL--Y------EKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGR 190
+ +L Y E ++ L + + R+ P LK+ILMSAT+ + F S
Sbjct: 264 QREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSS--- 320
Query: 191 LFRNPPIIEVPTRQFPVTVHF--------SKRTEIVDYIGQAYKKVMSIHKRLP---QGG 239
F P+++VP R FP+TV + + ++E +D G + + +I + P +G
Sbjct: 321 YFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDP-GPFLRVLEAIDNKYPPEERGD 379
Query: 240 ILVFVTGQREV 250
+LVF++G E+
Sbjct: 380 LLVFLSGMAEI 390
Score = 274 (101.5 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 65/186 (34%), Positives = 100/186 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL++ L A Q +VF+ G R ++STN+AETS+TI GI++VVD+G+ K Y+
Sbjct: 409 VLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQ 468
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + WIS+ C+RLY+ + ++ P + EI +V +D +
Sbjct: 469 AKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAP-YPVPEIRRVALDAL 527
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
VL MKSM++ FPF PP +L A L+ ALDS+ LT +G +A P+
Sbjct: 528 VLQMKSMSVGDPRTFPFIEPPPPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVV 587
Query: 619 HSRMLL 624
+ML+
Sbjct: 588 IGKMLI 593
Score = 45 (20.9 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 727 ELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
E S++ ++C + + EM+ LR+Q LL
Sbjct: 657 ERSRNSRKWCRHRGIEEHRLYEMANLRRQFKELL 690
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 289 (106.8 bits), Expect = 3.1e-45, Sum P(3) = 3.1e-45
Identities = 83/256 (32%), Positives = 140/256 (54%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
S+ +++ +K LPI +I+E V + V++ G+TGCGK+TQVPQ+L +G + C
Sbjct: 150 SKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLASGINNIAC 209
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
TQPRR+A ++ AKRV+FE G +VG+Q+R + + + F+T+G+L
Sbjct: 210 ---------TQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLL 260
Query: 142 LRELK--ALYEKQQQLL------RSGQC------IEPKDRVFP-LKLILMSATLRVEDFI 186
LR+++ A + Q L+ R C + + P L+L+LMSAT+ ++ F
Sbjct: 261 LRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFS 320
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFS--------KRTEIVDYIGQAYKKVMS-IHKRLPQ 237
S F + P+++VP R FP+ V + R+E +D + Y +V+ I +R PQ
Sbjct: 321 S---YFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLD--PRPYLRVLQGIDQRYPQ 375
Query: 238 ---GGILVFVTGQREV 250
G +L+F++G E+
Sbjct: 376 EERGDLLLFLSGVAEI 391
Score = 284 (105.0 bits), Expect = 3.1e-45, Sum P(3) = 3.1e-45
Identities = 62/186 (33%), Positives = 102/186 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL++ L A Q +VF+ G R ++STN+AETS+TI G+++VVD+G+ K ++
Sbjct: 410 VLPLHSTLSLAQQDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPK 469
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ + WIS+ CYRLYS + ++ P + EI +V +D +
Sbjct: 470 AKMQRLQEFWISRASSEQRKGRAGRTGPGVCYRLYSESDYDAFAP-YPVPEIHRVALDSL 528
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
+L MKSM + F F PP +++ A L+ ALD +G LT++G+ +A P+
Sbjct: 529 ILQMKSMGLGDPRTFTFIDPPPASSIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVV 588
Query: 619 HSRMLL 624
+ML+
Sbjct: 589 IGKMLV 594
Score = 40 (19.1 bits), Expect = 3.1e-45, Sum P(3) = 3.1e-45
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 734 EFCNEYALHLKTMEEMSKLRKQLLHLL 760
++C L + + EM LR+Q LL
Sbjct: 665 KWCRRRGLEEQRLYEMVNLRRQFKELL 691
Score = 38 (18.4 bits), Expect = 5.1e-45, Sum P(3) = 5.1e-45
Identities = 14/60 (23%), Positives = 24/60 (40%)
Query: 675 EERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVE 734
++ A + +D R+E+ +R+ K H N VL + L+ S S E
Sbjct: 699 DDTGRATEPQDRARRRERFTERQKLHQLKRDHELQENTKRKVLRLEEGLEGDASSGSDAE 758
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 294 (108.6 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 82/251 (32%), Positives = 137/251 (54%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
++++ R LPI I++ + ++ V++ G+TGCGK+TQVPQ+L AGF C
Sbjct: 158 KLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVAC---- 213
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
TQPRR+A ++ AKRV+FE G +VG+Q+R + + I F+T G+LLR++
Sbjct: 214 -----TQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQI 268
Query: 146 K---AL--Y------EKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGR 190
+ +L Y E ++ L + + R+ P LK+ILMSAT+ + F S
Sbjct: 269 QREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSS--- 325
Query: 191 LFRNPPIIEVPTRQFPVTVHF--------SKRTEIVDYIGQAYKKVMSIHKRLP---QGG 239
F P+++VP R FP+TV + + ++E +D G + + +I + P +G
Sbjct: 326 YFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDP-GPFLRVLEAIDNKYPPEERGD 384
Query: 240 ILVFVTGQREV 250
+LVF++G E+
Sbjct: 385 LLVFLSGMAEI 395
Score = 274 (101.5 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 65/186 (34%), Positives = 100/186 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL++ L A Q +VF+ G R ++STN+AETS+TI GI++VVD+G+ K Y+
Sbjct: 414 VLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQ 473
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + WIS+ C+RLY+ + ++ P + EI +V +D +
Sbjct: 474 AKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAP-YPVPEIRRVALDAL 532
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
VL MKSM++ FPF PP +L A L+ ALDS+ LT +G +A P+
Sbjct: 533 VLQMKSMSVGDPRTFPFIEPPPPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVV 592
Query: 619 HSRMLL 624
+ML+
Sbjct: 593 IGKMLI 598
Score = 45 (20.9 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 727 ELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
E S++ ++C + + EM+ LR+Q LL
Sbjct: 662 ERSRNSRKWCRHRGIEEHRLYEMANLRRQFKELL 695
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 292 (107.8 bits), Expect = 4.7e-45, Sum P(3) = 4.7e-45
Identities = 62/188 (32%), Positives = 102/188 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPL++ +P Q +VF+ V G V++STN+AETS+TI + YV+D+ ++KVK + +
Sbjct: 684 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 743
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + +Y W SK C+ L S A F L E+ + P+ +
Sbjct: 744 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFER-LETHMTPEMFRTPLHEI 802
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + + F PP + A++EAE L+ L+ALD+N LT LG+ +A P+
Sbjct: 803 ALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 862
Query: 617 PRHSRMLL 624
PR +M++
Sbjct: 863 PRFGKMMI 870
Score = 277 (102.6 bits), Expect = 4.7e-45, Sum P(3) = 4.7e-45
Identities = 75/195 (38%), Positives = 114/195 (58%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP+ E EI+EA++ NS VII G TGCGKTTQVPQF+ + ++R + + I V
Sbjct: 386 RELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECN--IVV 443
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDS-CSIKFMTDGILLRELKA-- 147
TQPRR++ ++ A+RVA+E G GK G+ VR + + SI F T G+LLR+L+A
Sbjct: 444 TQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKLEAGI 503
Query: 148 ------LYEK--QQQLLRSGQCIEPKDRV--FP-LKLILMSATLRVEDFISGGRLFRNPP 196
+ ++ ++ + + +D V +P ++++LMSAT+ F F N P
Sbjct: 504 RGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCE---YFFNCP 560
Query: 197 IIEVPTRQFPVTVHF 211
IIEV R +PV +F
Sbjct: 561 IIEVYGRTYPVQEYF 575
Score = 44 (20.5 bits), Expect = 4.7e-45, Sum P(3) = 4.7e-45
Identities = 14/63 (22%), Positives = 29/63 (46%)
Query: 706 HAKFS-NPTSDVLTVAYALQCFELSK-----SPVEFCNEYALHLKTMEEMSKLRKQLLHL 759
H F+ N SD + + Q ++ ++ + + FC L++ T+ + + QL +
Sbjct: 905 HRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEI 964
Query: 760 LFN 762
L N
Sbjct: 965 LIN 967
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 292 (107.8 bits), Expect = 4.9e-45, Sum P(3) = 4.9e-45
Identities = 61/188 (32%), Positives = 102/188 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPL++ +P Q +VF+ V G +++STN+AETS+TI + YV+D+ ++KVK + +
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + +Y W SK C+ L S A F L E+ + P+ +
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFER-LETHMTPEMFRTPLHEI 798
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + + F PP + A++EAE L+ L+ALD+N LT LG+ +A P+
Sbjct: 799 ALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 858
Query: 617 PRHSRMLL 624
PR +M++
Sbjct: 859 PRFGKMMI 866
Score = 277 (102.6 bits), Expect = 4.9e-45, Sum P(3) = 4.9e-45
Identities = 77/223 (34%), Positives = 123/223 (55%)
Query: 6 PSSLQRPLAAPIVVHVSRPNEVE---NNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCG 62
P + L ++ + + +++ R+ LP+ E EI+EA++ N VII G TGCG
Sbjct: 354 PEQISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCG 413
Query: 63 KTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVR 122
KTTQVPQF+ + ++R + + I VTQPRR++ ++ A+RVA+E G GK G+ VR
Sbjct: 414 KTTQVPQFILDDCIQNDRAAECN--IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVR 471
Query: 123 HDKKIG-DSCSIKFMTDGILLRELKA--------LYEK--QQQLLRSGQCIEPKDRV--F 169
+ + SI F T G+LLR+L+A + ++ ++ + + +D V +
Sbjct: 472 FESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAY 531
Query: 170 P-LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHF 211
P ++++LMSAT+ F F N PIIEV R FPV +F
Sbjct: 532 PEVRIVLMSATIDTSMFCE---YFFNCPIIEVYGRTFPVQEYF 571
Score = 44 (20.5 bits), Expect = 4.9e-45, Sum P(3) = 4.9e-45
Identities = 14/63 (22%), Positives = 29/63 (46%)
Query: 706 HAKFS-NPTSDVLTVAYALQCFELSK-----SPVEFCNEYALHLKTMEEMSKLRKQLLHL 759
H F+ N SD + + Q ++ ++ + + FC L++ T+ + + QL +
Sbjct: 901 HRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEI 960
Query: 760 LFN 762
L N
Sbjct: 961 LIN 963
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 292 (107.8 bits), Expect = 4.9e-45, Sum P(3) = 4.9e-45
Identities = 61/188 (32%), Positives = 102/188 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPL++ +P Q +VF+ V G +++STN+AETS+TI + YV+D+ ++KVK + +
Sbjct: 680 ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 739
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + +Y W SK C+ L S A F L E+ + P+ +
Sbjct: 740 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFER-LETHMTPEMFRTPLHEI 798
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + + F PP + A++EAE L+ L+ALD+N LT LG+ +A P+
Sbjct: 799 ALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 858
Query: 617 PRHSRMLL 624
PR +M++
Sbjct: 859 PRFGKMMI 866
Score = 277 (102.6 bits), Expect = 4.9e-45, Sum P(3) = 4.9e-45
Identities = 77/223 (34%), Positives = 123/223 (55%)
Query: 6 PSSLQRPLAAPIVVHVSRPNEVE---NNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCG 62
P + L ++ + + +++ R+ LP+ E EI+EA++ N VII G TGCG
Sbjct: 354 PEQISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCG 413
Query: 63 KTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVR 122
KTTQVPQF+ + ++R + + I VTQPRR++ ++ A+RVA+E G GK G+ VR
Sbjct: 414 KTTQVPQFILDDCIQNDRAAECN--IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVR 471
Query: 123 HDKKIG-DSCSIKFMTDGILLRELKA--------LYEK--QQQLLRSGQCIEPKDRV--F 169
+ + SI F T G+LLR+L+A + ++ ++ + + +D V +
Sbjct: 472 FESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAY 531
Query: 170 P-LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHF 211
P ++++LMSAT+ F F N PIIEV R FPV +F
Sbjct: 532 PEVRIVLMSATIDTSMFCE---YFFNCPIIEVYGRTFPVQEYF 571
Score = 44 (20.5 bits), Expect = 4.9e-45, Sum P(3) = 4.9e-45
Identities = 14/63 (22%), Positives = 29/63 (46%)
Query: 706 HAKFS-NPTSDVLTVAYALQCFELSK-----SPVEFCNEYALHLKTMEEMSKLRKQLLHL 759
H F+ N SD + + Q ++ ++ + + FC L++ T+ + + QL +
Sbjct: 901 HRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEI 960
Query: 760 LFN 762
L N
Sbjct: 961 LIN 963
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 284 (105.0 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 66/186 (35%), Positives = 102/186 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL++ L A Q +VF+ G R ++STN+AETS+TI GI++VVD+G+ K Y+
Sbjct: 410 VLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQ 469
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ + WIS+ C+RLY+ + ++ P + EI +V +D +
Sbjct: 470 AKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAP-YPVPEIRRVALDAL 528
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
VL MKSM++ FPF PP T+L A L+ ALDS+ LT +G +A P+
Sbjct: 529 VLQMKSMSVGDPRTFPFIEPPPPTSLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVV 588
Query: 619 HSRMLL 624
+ML+
Sbjct: 589 IGKMLI 594
Score = 283 (104.7 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 71/199 (35%), Positives = 112/199 (56%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
+++ R LPI I++ + ++ V++ G+TGCGK+TQVPQ+L AG CS
Sbjct: 154 KLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAG-----CS--- 205
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+ TQPRR+A ++ AKRV FE G +VG+Q+R + + I F+T G+LLR++
Sbjct: 206 -HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQM 264
Query: 146 K---AL--Y------EKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGR 190
+ +L Y E ++ L + + R+ P LK++LMSAT+ + F S
Sbjct: 265 QREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSS--- 321
Query: 191 LFRNPPIIEVPTRQFPVTV 209
F N P+++VP R FP+TV
Sbjct: 322 YFGNAPVVQVPGRLFPITV 340
Score = 41 (19.5 bits), Expect = 1.1e-44, Sum P(3) = 1.1e-44
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 727 ELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
E ++ ++C + + EM+ LR+Q LL
Sbjct: 658 ERGRNSRKWCRHRGIEEHRLYEMANLRRQFKELL 691
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 289 (106.8 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 63/181 (34%), Positives = 93/181 (51%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD G K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G++ E+ ISK C+R+YS +N +PD EI + +
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLT 432
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG +M +P+
Sbjct: 433 SVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLP 492
Query: 617 P 617
P
Sbjct: 493 P 493
Score = 265 (98.3 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 55/111 (49%), Positives = 77/111 (69%)
Query: 35 PIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPR 94
PI ++I++AV DNS +I+ G TG GKTTQ+P++L+EAGF S+ G IGVTQPR
Sbjct: 54 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF------SQHGMIGVTQPR 107
Query: 95 RVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+VA ++ A+RVA E+ LG +VG+QVR D +IK+MTDG LL+ +
Sbjct: 108 KVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHI 158
Score = 49 (22.3 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 528 HCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSN-FPFPTPPEVTALVE 586
H RL S V + P +CA I +D LL+ + V N F P PE E
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK--E 535
Query: 587 AERCLKALEA 596
AE+ + L A
Sbjct: 536 AEQRHRELAA 545
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 293 (108.2 bits), Expect = 1.5e-44, Sum P(3) = 1.5e-44
Identities = 62/188 (32%), Positives = 103/188 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPL++ +P Q +VF+ V G V++STN+AETS+TI + YV+D+ ++KVK + +
Sbjct: 675 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 734
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + +Y W SK C+ L S A F+ L E+ + P+ +
Sbjct: 735 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDR-LETHMTPEMFRTPLHEI 793
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + + F PP + A++EAE L+ L+ALD+N LT LG+ +A P+
Sbjct: 794 ALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 853
Query: 617 PRHSRMLL 624
PR +M++
Sbjct: 854 PRFGKMMI 861
Score = 271 (100.5 bits), Expect = 1.5e-44, Sum P(3) = 1.5e-44
Identities = 73/195 (37%), Positives = 113/195 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP+ E EI+EA++ N VI+ G TGCGKTTQVPQF+ + ++R + + I V
Sbjct: 381 RELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILDDFIQNDRAAECN--IVV 438
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIG-DSCSIKFMTDGILLRELKA-- 147
TQPRR++ ++ A+RVA+E G GK G+ VR + + SI F T G+LLR+L+A
Sbjct: 439 TQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAGI 498
Query: 148 ------LYEK--QQQLLRSGQCIEPKDRV--FP-LKLILMSATLRVEDFISGGRLFRNPP 196
+ ++ ++ + + +D V +P ++++LMSAT+ F F N P
Sbjct: 499 RGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCE---YFFNCP 555
Query: 197 IIEVPTRQFPVTVHF 211
IIEV R +PV +F
Sbjct: 556 IIEVYGRTYPVQEYF 570
Score = 44 (20.5 bits), Expect = 1.5e-44, Sum P(3) = 1.5e-44
Identities = 14/63 (22%), Positives = 29/63 (46%)
Query: 706 HAKFS-NPTSDVLTVAYALQCFELSK-----SPVEFCNEYALHLKTMEEMSKLRKQLLHL 759
H F+ N SD + + Q ++ ++ + + FC L++ T+ + + QL +
Sbjct: 896 HRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEI 955
Query: 760 LFN 762
L N
Sbjct: 956 LIN 958
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 341 (125.1 bits), Expect = 2.5e-44, Sum P(4) = 2.5e-44
Identities = 77/195 (39%), Positives = 107/195 (54%)
Query: 433 GVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKV 492
G A+ VLPLYA LP A QLRVF+ +G R V++STN+AETS+TI GIKYVVDTG K
Sbjct: 228 GCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKA 287
Query: 493 KKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISK 552
KKYN +G+E +Q +SK CYRLY+ F + EI +
Sbjct: 288 KKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKF-DKMTVPEIQR 346
Query: 553 VPVDGVVLLMKSMNIDKVSNFPF---PTPPEVTALVEAERCLKALEALDSNGRLTALGKA 609
+ V+L + +M + V F F P+P + A + L ALE D LT +G+
Sbjct: 347 CNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRK 406
Query: 610 MAHYPMSPRHSRMLL 624
MA +P+ P+ ++ +L
Sbjct: 407 MAAFPLEPKFAKTIL 421
Score = 152 (58.6 bits), Expect = 2.5e-44, Sum P(4) = 2.5e-44
Identities = 36/96 (37%), Positives = 55/96 (57%)
Query: 170 PLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVM 229
PLK+I+MSAT+ V+ F + F P++ + RQ P+ V ++K+ + DY+ A V
Sbjct: 134 PLKVIVMSATMDVDLF---SQYFNGAPVLYLEGRQHPIQVFYTKQPQN-DYLHAALVSVF 189
Query: 230 SIHKRLPQG-GILVFVTGQREVEYLCSKLRKASKQL 264
IH+ P ILVF+TGQ E+E + R +K L
Sbjct: 190 QIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHL 225
Score = 79 (32.9 bits), Expect = 2.5e-44, Sum P(4) = 2.5e-44
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 117 VGFQVRHDKKIGDSCSIKFMTDGILLRELKALYEKQQQLLRSGQCI 162
VG+ VR D + IKF+TDG+LLRE A+ + LLR C+
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLRE--AISDS---LLRKYSCV 101
Score = 46 (21.3 bits), Expect = 2.5e-44, Sum P(4) = 2.5e-44
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 708 KFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
KF + D +T+ + F+ ++C E ++ K M ++++R QL
Sbjct: 461 KFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQL 509
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 309 (113.8 bits), Expect = 3.8e-44, Sum P(3) = 3.8e-44
Identities = 68/188 (36%), Positives = 104/188 (55%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPL++ +P Q RVFE V +G V++STN+AETS+TI + +V+D+ ++KVK + S
Sbjct: 689 ILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSH 748
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + +Y W SK C+ L S A F L EI + P+ V
Sbjct: 749 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEK-LETHMTPEIFRTPLHEV 807
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + + NF PP + A++EAE L+ L+ALDSN LT LG+ +A P+
Sbjct: 808 ALSIKLLRLGGIGNFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIE 867
Query: 617 PRHSRMLL 624
PR +M++
Sbjct: 868 PRLGKMMI 875
Score = 254 (94.5 bits), Expect = 3.8e-44, Sum P(3) = 3.8e-44
Identities = 70/195 (35%), Positives = 109/195 (55%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R LP+ +++IM + +N VII G TGCGKTTQVPQ++ + R S + I V
Sbjct: 392 RSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFIKGGRASDCN--IVV 449
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIG-DSCSIKFMTDGILLRELKA-- 147
TQPRR++ ++ A+RV+FE G +GK G+ VR + + SI F T G+LLR+L++
Sbjct: 450 TQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRKLESGI 509
Query: 148 ------LYEK--QQQLLRSGQCIEPKDRV--FP-LKLILMSATLRVEDFISGGRLFRNPP 196
+ ++ ++ + + +D V +P +++ILMSAT+ F F N P
Sbjct: 510 RGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMF---KEYFFNCP 566
Query: 197 IIEVPTRQFPVTVHF 211
+IEV R PV +F
Sbjct: 567 VIEVHGRAHPVQEYF 581
Score = 40 (19.1 bits), Expect = 3.8e-44, Sum P(3) = 3.8e-44
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 733 VEFCNEYALHLKTMEEMSKLRKQLLHLLFN 762
+ FC L++ T+ + + QL +L N
Sbjct: 943 IRFCEHKRLNMPTLRMTWEAKVQLKEILVN 972
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 289 (106.8 bits), Expect = 5.3e-44, Sum P(3) = 5.3e-44
Identities = 63/181 (34%), Positives = 93/181 (51%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD G K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G++ E+ ISK C+R+YS +N +PD EI + +
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLT 432
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG +M +P+
Sbjct: 433 SVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLP 492
Query: 617 P 617
P
Sbjct: 493 P 493
Score = 267 (99.0 bits), Expect = 5.3e-44, Sum P(3) = 5.3e-44
Identities = 62/147 (42%), Positives = 88/147 (59%)
Query: 3 GNLPSSLQ--RPLAAPIVVHVSR--PNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGE 58
G P LQ RP A I + ++ PI +++++AV DNS +I+ G
Sbjct: 18 GERPVELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGN 77
Query: 59 TGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVG 118
TG GKTTQ+P++L+EAGF S+ G IGVTQPR+VA ++ A+RVA E+ LG +VG
Sbjct: 78 TGSGKTTQLPKYLYEAGF------SQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVG 131
Query: 119 FQVRHDKKIGDSCSIKFMTDGILLREL 145
+QVR D +IK+MTDG LL+ +
Sbjct: 132 YQVRFDDCSSKETAIKYMTDGCLLKHI 158
Score = 206 (77.6 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 72/247 (29%), Positives = 119/247 (48%)
Query: 35 PIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS--SRSGRIG-VT 91
PI +++++AV DNS +I+ G TG GKTTQ+P++L+EAGF + ++ ++ ++
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 92 QPRRVA--VLAT-AKRVAFELGLH--LGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
+RVA + T +V +++ KE K + D C +K + L +
Sbjct: 114 VAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAI-----KYMTDGCLLKHILGDPNLNKFS 168
Query: 147 ALY--EKQQQLLRSG-------QCIEPK--DRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ E ++ L + + + K +R LK+++MSAT+ + + F N
Sbjct: 169 VIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSA---FFGNC 225
Query: 196 PIIEVPTRQFPVTVHFS-----KRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREV 250
PI ++P R +PV F + E YI K M IH G ILVF+TGQ E+
Sbjct: 226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEI 285
Query: 251 EYLCSKL 257
E C L
Sbjct: 286 EKSCELL 292
Score = 48 (22.0 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 528 HCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSN-FPFPTPPEVTALVE 586
H RL S V + P +CA I +D LL+ + V N F P PE E
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK--E 535
Query: 587 AERCLKALEA 596
AE+ + L A
Sbjct: 536 AEQKHRELAA 545
Score = 37 (18.1 bits), Expect = 5.3e-44, Sum P(3) = 5.3e-44
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVL 717
RKLK+ + F P +VL
Sbjct: 598 RKLKQQSDFPRETFEGPKHEVL 619
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 288 (106.4 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 72/199 (36%), Positives = 111/199 (55%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
+++ R LPI I++ + ++ V++ G+TGCGK+TQVPQ+L AGF C
Sbjct: 154 KLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVAC---- 209
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
TQPRR+A ++ AKRV FE G +VG+Q+R + + I F+T G+LLR++
Sbjct: 210 -----TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQI 264
Query: 146 K---AL--YEK------QQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGR 190
+ +L YE ++ L + + R+ P LK+ILMSAT+ + F S
Sbjct: 265 QREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSS--- 321
Query: 191 LFRNPPIIEVPTRQFPVTV 209
F N P+++VP R FP+TV
Sbjct: 322 YFSNAPVVQVPGRLFPITV 340
Score = 251 (93.4 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 58/173 (33%), Positives = 92/173 (53%)
Query: 452 LRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISK 511
+ VF+ G R ++STN+AETS+TI GI++VVD+G+ K Y+ ++ + WIS+
Sbjct: 338 ITVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQ 397
Query: 512 XXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVS 571
C+RLY+ + ++ P + EI +V +D +VL MKSM++
Sbjct: 398 ASAEQRKGRAGRTGPGVCFRLYAESDYDAFAP-YPVPEIRRVALDSLVLQMKSMSVGDPR 456
Query: 572 NFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
FPF PP +L A L+ ALDS+ LT +G +A P+ +ML+
Sbjct: 457 TFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLI 509
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 260 (96.6 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 73/201 (36%), Positives = 105/201 (52%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E+ R LPI + I AV N ++I GETGCGKTTQVPQ+L + + S R +
Sbjct: 179 EITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKR---ET 235
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+I TQPRR++ ++ ++R++ E G +G+ +G++VR K G S+ F T+GILLR L
Sbjct: 236 CKIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVL 295
Query: 146 --KALYEKQQQL-------LRSGQCIEP------KDRVFP----LKLILMSATLRVEDFI 186
K + + C +D + P L+LILMSATL E F
Sbjct: 296 VGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRD-LLPSNPHLRLILMSATLDAERF- 353
Query: 187 SGGRLFRNPPIIEVPTRQFPV 207
SG F P++ VP +PV
Sbjct: 354 SG--YFGGCPVVRVPGFTYPV 372
Score = 256 (95.2 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 60/188 (31%), Positives = 100/188 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++ L++M+PA Q +VF G R +V++TN+AE+++TI + YV+D+GR K K Y+
Sbjct: 585 IICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPY 644
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + + + W+SK CY LYS + +PDF EI ++PV+ +
Sbjct: 645 NNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAAS-MPDFKVPEIKRMPVEEL 703
Query: 559 VLLMKSMNID-KVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
L +K ++ + K ++F PP ++ A L+ + AL LT LG+ H P+
Sbjct: 704 CLQVKILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPV 763
Query: 616 SPRHSRML 623
P S+ML
Sbjct: 764 HPLISKML 771
Score = 86 (35.3 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKS---PVEFC 736
A D ++P +R+ AKL A SD L V A +C++ +K EFC
Sbjct: 789 AADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGRGLSAEFC 848
Query: 737 NEYALHLKTMEEMSKLRKQL 756
++Y + M+ + ++R QL
Sbjct: 849 SQYFVSPSAMKMLDQMRSQL 868
Score = 40 (19.1 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 309 TDRFSSYDEDQFDIDDNELDALSDSETESETEILGED 345
T S D ++ + DD E+ A ++ E + T G D
Sbjct: 988 TGSSDSDDSNEEEEDDEEVAANTNEEVAANTNEEGMD 1024
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 289 (106.8 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 63/181 (34%), Positives = 93/181 (51%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD G K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G++ E+ ISK C+R+YS +N +PD EI + +
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLT 432
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG +M +P+
Sbjct: 433 SVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLP 492
Query: 617 P 617
P
Sbjct: 493 P 493
Score = 263 (97.6 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 54/111 (48%), Positives = 77/111 (69%)
Query: 35 PIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPR 94
PI +++++AV DNS +I+ G TG GKTTQ+P++L+EAGF S+ G IGVTQPR
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF------SQHGMIGVTQPR 107
Query: 95 RVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+VA ++ A+RVA E+ LG +VG+QVR D +IK+MTDG LL+ +
Sbjct: 108 KVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHI 158
Score = 49 (22.3 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 528 HCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSN-FPFPTPPEVTALVE 586
H RL S V + P +CA I +D LL+ + V N F P PE E
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK--E 535
Query: 587 AERCLKALEA 596
AE+ + L A
Sbjct: 536 AEQRHRELAA 545
Score = 37 (18.1 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVL 717
RKLK+ + F P +VL
Sbjct: 598 RKLKQQSDFPRETFEGPKHEVL 619
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 289 (106.8 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 63/181 (34%), Positives = 93/181 (51%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD G K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G++ E+ ISK C+R+YS +N +PD EI + +
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLT 432
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG +M +P+
Sbjct: 433 SVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLP 492
Query: 617 P 617
P
Sbjct: 493 P 493
Score = 263 (97.6 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 54/111 (48%), Positives = 77/111 (69%)
Query: 35 PIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPR 94
PI +++++AV DNS +I+ G TG GKTTQ+P++L+EAGF S+ G IGVTQPR
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF------SQHGMIGVTQPR 107
Query: 95 RVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+VA ++ A+RVA E+ LG +VG+QVR D +IK+MTDG LL+ +
Sbjct: 108 KVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHI 158
Score = 49 (22.3 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 528 HCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSN-FPFPTPPEVTALVE 586
H RL S V + P +CA I +D LL+ + V N F P PE E
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK--E 535
Query: 587 AERCLKALEA 596
AE+ + L A
Sbjct: 536 AEQRHRELAA 545
Score = 37 (18.1 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVL 717
RKLK+ + F P +VL
Sbjct: 598 RKLKQQSDFPRETFEGPKHEVL 619
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 289 (106.8 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 63/181 (34%), Positives = 93/181 (51%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD G K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G++ E+ ISK C+R+YS +N +PD EI + +
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLT 432
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG +M +P+
Sbjct: 433 SVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLP 492
Query: 617 P 617
P
Sbjct: 493 P 493
Score = 263 (97.6 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 54/111 (48%), Positives = 77/111 (69%)
Query: 35 PIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPR 94
PI +++++AV DNS +I+ G TG GKTTQ+P++L+EAGF S+ G IGVTQPR
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF------SQHGMIGVTQPR 107
Query: 95 RVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+VA ++ A+RVA E+ LG +VG+QVR D +IK+MTDG LL+ +
Sbjct: 108 KVAAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHI 158
Score = 49 (22.3 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 528 HCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSN-FPFPTPPEVTALVE 586
H RL S V + P +CA I +D LL+ + V N F P PE E
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK--E 535
Query: 587 AERCLKALEA 596
AE+ + L A
Sbjct: 536 AEQRHRELAA 545
Score = 37 (18.1 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVL 717
RKLK+ + F P +VL
Sbjct: 598 RKLKQQSDFPRETFEGPKHEVL 619
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 285 (105.4 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
Identities = 62/181 (34%), Positives = 93/181 (51%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD G K +N
Sbjct: 313 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 372
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G++ E+ ISK C+R+YS ++ +PD EI + +
Sbjct: 373 PRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLT 432
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG +M +P+
Sbjct: 433 SVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLP 492
Query: 617 P 617
P
Sbjct: 493 P 493
Score = 267 (99.0 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
Identities = 62/147 (42%), Positives = 88/147 (59%)
Query: 3 GNLPSSLQ--RPLAAPIVVHVSR--PNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGE 58
G P LQ RP A I + ++ PI +++++AV DNS +I+ G
Sbjct: 18 GERPIELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGN 77
Query: 59 TGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVG 118
TG GKTTQ+P++L+EAGF S+ G IGVTQPR+VA ++ A+RVA E+ LG +VG
Sbjct: 78 TGSGKTTQLPKYLYEAGF------SQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVG 131
Query: 119 FQVRHDKKIGDSCSIKFMTDGILLREL 145
+QVR D +IK+MTDG LL+ +
Sbjct: 132 YQVRFDDCSSKETAIKYMTDGCLLKHI 158
Score = 206 (77.6 bits), Expect = 3.3e-37, Sum P(3) = 3.3e-37
Identities = 77/244 (31%), Positives = 120/244 (49%)
Query: 35 PIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS--SRSGRIG-VT 91
PI +++++AV DNS +I+ G TG GKTTQ+P++L+EAGF + ++ ++ ++
Sbjct: 54 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 92 QPRRVA--VLAT-AKRVAFELGLH--LGKEVGFQVRHD----KKI-GDSCSIKFMTDGIL 141
+RVA + T +V +++ KE + D K I GD KF I+
Sbjct: 114 VAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSV--II 171
Query: 142 LREL--KALY-EKQQQLLRSGQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPII 198
L E + L + LL+ + +R LK+++MSAT+ + + F N PI
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSA---FFGNCPIF 228
Query: 199 EVPTRQFPVTVHFS-----KRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYL 253
++P R +PV F + E YI K M IH G ILVF+TGQ E+E
Sbjct: 229 DIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKS 288
Query: 254 CSKL 257
C L
Sbjct: 289 CELL 292
Score = 48 (22.0 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 528 HCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSN-FPFPTPPEVTALVE 586
H RL S V + P +CA I +D LL+ + V N F P PE E
Sbjct: 478 HVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK--E 535
Query: 587 AERCLKALEA 596
AE+ + L A
Sbjct: 536 AEQRHRELAA 545
Score = 37 (18.1 bits), Expect = 1.5e-43, Sum P(3) = 1.5e-43
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVL 717
RKLK+ + F P +VL
Sbjct: 598 RKLKQQSDFPRETFEGPKHEVL 619
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 283 (104.7 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 79/248 (31%), Positives = 125/248 (50%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI + +I+E +N+N I+ GETG GK+TQ+PQFL IGV
Sbjct: 179 REKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMP---------ENPKMIGV 229
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE--LKAL 148
TQPRRVA + A RV+ E G LG++VG+QVR +K++TDG+LLRE L +
Sbjct: 230 TQPRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSN 289
Query: 149 YEKQQQLL--RSGQCIEPKDRVFP-LKLILMSATLR-VEDFISGGRL--------FRNPP 196
K ++ + + D + LK I+ S + ++ + L F N P
Sbjct: 290 LTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNAP 349
Query: 197 IIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSK 256
I+ + + +PV+ F E D + + ++ I+ P+G +L F+ GQ E++
Sbjct: 350 ILYIEGKMYPVS-QFYLDAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEIDNCVKS 408
Query: 257 LRKASKQL 264
L + + QL
Sbjct: 409 LEQLAPQL 416
Score = 256 (95.2 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 59/186 (31%), Positives = 100/186 (53%)
Query: 440 LPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSAN 499
LPLYA L Q ++FE + +G R V+++TN+AETS+T+ G+KYV+D+G K+K +
Sbjct: 426 LPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNL 485
Query: 500 GIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVV 559
G+ + IS+ +RLY + + LP +EI + + V
Sbjct: 486 GLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYM-ALPKQQESEIKRNDIILPV 544
Query: 560 LLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPRH 619
L +K + +D + N+ + P A++ A L L AL+ +G++T LG M+ P+ P+
Sbjct: 545 LTLKKLGVDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQL 604
Query: 620 SRMLLT 625
S +L+T
Sbjct: 605 SVVLIT 610
Score = 54 (24.1 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 28/108 (25%), Positives = 47/108 (43%)
Query: 255 SKLRKASKQLLVNSSKENKGNQVVADSEPNATK--DINMKEINEAFEIQGYSTEQQTDRF 312
SK RK + N +K+N N V SEP T + ++ N+ F+ ++ E + ++
Sbjct: 16 SKKRKRKR----NKNKKNDNNTPVETSEPIPTPVYEDDIHRQNKKFK---FNEEGEMEKP 68
Query: 313 SSYDEDQFDI--DDNEL---DALSDSETESETEILGE-DEKLVEQKCP 354
E+Q D+ D E + L E E E+ + DE + P
Sbjct: 69 QESPEEQLDLVADQGEPCTEEPLPQHEGFEEIEVTDDIDETEEPENLP 116
Score = 51 (23.0 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 706 HAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
H N D++ + Q ++ E+C E A K + + K++ QL
Sbjct: 651 HCPLGNIHGDLIALYEYFQAYQAQGK--EWCKELAFSFKGFKNVEKIKYQL 699
Score = 44 (20.5 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 19/73 (26%), Positives = 32/73 (43%)
Query: 5 LPSSLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDN---SAVIICGETGC 61
L + +R + +++ + RKDL IV+M + + N +A I+ E
Sbjct: 298 LDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNAPILYIE--- 354
Query: 62 GKTTQVPQFLFEA 74
GK V QF +A
Sbjct: 355 GKMYPVSQFYLDA 367
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 289 (106.8 bits), Expect = 2.4e-43, Sum P(3) = 2.4e-43
Identities = 63/181 (34%), Positives = 93/181 (51%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD G K +N
Sbjct: 391 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 450
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G++ E+ ISK C+R+YS +N +PD EI + +
Sbjct: 451 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLT 510
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG +M +P+
Sbjct: 511 SVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLP 570
Query: 617 P 617
P
Sbjct: 571 P 571
Score = 263 (97.6 bits), Expect = 2.4e-43, Sum P(3) = 2.4e-43
Identities = 54/111 (48%), Positives = 77/111 (69%)
Query: 35 PIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPR 94
PI +++++AV DNS +I+ G TG GKTTQ+P++L+EAGF S+ G IGVTQPR
Sbjct: 132 PIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF------SQHGMIGVTQPR 185
Query: 95 RVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+VA ++ A+RVA E+ LG +VG+QVR D +IK+MTDG LL+ +
Sbjct: 186 KVAAISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHI 236
Score = 49 (22.3 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 528 HCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSN-FPFPTPPEVTALVE 586
H RL S V + P +CA I +D LL+ + V N F P PE E
Sbjct: 556 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK--E 613
Query: 587 AERCLKALEA 596
AE+ + L A
Sbjct: 614 AEQRHRELAA 623
Score = 40 (19.1 bits), Expect = 3.0e-20, Sum P(3) = 3.0e-20
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 381 SGKNASGPSSQM---KLSTPAIPEQCTELPP 408
SG +A G + KLS P T LPP
Sbjct: 8 SGPSAGGLAGSRGWGKLSGGGAPRHLTALPP 38
Score = 37 (18.1 bits), Expect = 2.4e-43, Sum P(3) = 2.4e-43
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 696 RKLKEVAKLSHAKFSNPTSDVL 717
RKLK+ + F P +VL
Sbjct: 676 RKLKQQSDFPRETFEGPKHEVL 697
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 269 (99.8 bits), Expect = 2.7e-43, Sum P(4) = 2.7e-43
Identities = 74/198 (37%), Positives = 105/198 (53%)
Query: 29 NNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRI 88
++R LP ++ A++ N ++I GETGCGKTTQ+PQF+ E+ +NR + S I
Sbjct: 215 DSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSS--I 272
Query: 89 GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA- 147
TQPRR++ ++ ++RVA+E G LG+ VG++VR + G + F T GILLR L
Sbjct: 273 ICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVD 332
Query: 148 ------LYEKQQQLLRSGQ-----CIEPKD---RVFPLKLILMSATLRVEDFISGGRLFR 193
+ ++ G I KD R LKLILMSATL E F S F
Sbjct: 333 RNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSS---YFG 389
Query: 194 NPPIIEVPTRQFPVTVHF 211
+I +P +PV HF
Sbjct: 390 GAGVIYIPGFTYPVRSHF 407
Score = 258 (95.9 bits), Expect = 2.7e-43, Sum P(4) = 2.7e-43
Identities = 58/188 (30%), Positives = 95/188 (50%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+L + + Q +FE+ G R +V++TN+AETS+TI + +V+D G+ K Y++
Sbjct: 532 LLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDAL 591
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N WISK CY LY V++ ++ EI + P+ +
Sbjct: 592 NNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYD-AFAEYQLPEILRTPLHSL 650
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +KS+N+ +S F PE+ A+ +A LK + ALD N LT LG+ ++ PM
Sbjct: 651 CLQIKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPME 710
Query: 617 PRHSRMLL 624
P+ +ML+
Sbjct: 711 PKLGKMLI 718
Score = 61 (26.5 bits), Expect = 2.7e-43, Sum P(4) = 2.7e-43
Identities = 17/65 (26%), Positives = 38/65 (58%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSK--SPV-EFCNEYALHLKTMEEMSKLRKQ 755
K++A+ + ++FS SD L + A + ++ ++ S V ++C + L ++++ + LRK+
Sbjct: 749 KDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKE 808
Query: 756 LLHLL 760
LL
Sbjct: 809 FFSLL 813
Score = 51 (23.0 bits), Expect = 2.7e-43, Sum P(4) = 2.7e-43
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 238 GGILVFVTGQREVEYLCSKLR 258
GGIL+F+TG ++ L KL+
Sbjct: 499 GGILIFLTGWDDISSLKEKLQ 519
Score = 38 (18.4 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 529 CYRLYS---SAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFP 576
CY +Y S V N FS K DG VLL + + + P+P
Sbjct: 841 CYGMYPGICSVVHNE--RSFSL----KTMEDGQVLLYSNSENARETKIPYP 885
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 281 (104.0 bits), Expect = 3.5e-43, Sum P(3) = 3.5e-43
Identities = 62/188 (32%), Positives = 100/188 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP ++ +P Q +VFE V EG +++STN+AETS+TI I +V+D + ++K + S
Sbjct: 687 ILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSH 746
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + SY W SK C+ L S A F L D E+ + P+ +
Sbjct: 747 NNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQ-ALEDNLTPEMFRTPLHEM 805
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + + +F PP V A++EAE L+ + LD+N LT LG+ +A P+
Sbjct: 806 ALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIE 865
Query: 617 PRHSRMLL 624
PR +M++
Sbjct: 866 PRLGKMMV 873
Score = 265 (98.3 bits), Expect = 3.5e-43, Sum P(3) = 3.5e-43
Identities = 79/211 (37%), Positives = 115/211 (54%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG--RI 88
R+ LPI M EI+ A+NDN VII G TGCGKTTQ+ Q++ + CS + G I
Sbjct: 381 REKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYI----CSGQGGYANI 436
Query: 89 GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSC-SIKFMTDGILLRELKA 147
VTQPRR++ ++ A+RVA E LG VG+ VR + +I F T G+LLR+L+A
Sbjct: 437 YVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKLEA 496
Query: 148 ---------LYEKQQQLLRSG-QCIEPKDRV--FP-LKLILMSATLRVEDFISGGRLFRN 194
+ E ++ + S + +D V +P L +ILMSAT+ F + F
Sbjct: 497 GLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKF---SKYFGI 553
Query: 195 PPIIEVPTRQFPVTVHFSKRT-EIVDYIGQA 224
P++EVP R FPV F + ++ D++ A
Sbjct: 554 CPVLEVPGRAFPVQQFFLEDIIQMTDFVPSA 584
Score = 50 (22.7 bits), Expect = 3.5e-43, Sum P(3) = 3.5e-43
Identities = 23/74 (31%), Positives = 34/74 (45%)
Query: 693 LGKRKLKEVAK-LSHAKFSNPTSDVLTVAYALQCFELSKSPVE-----FCNEYALHLKTM 746
+G+R+L K LS K SD + + A Q + K E FC+ L + TM
Sbjct: 902 IGQRRLANHQKALSGTK----CSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTM 957
Query: 747 EEMSKLRKQLLHLL 760
+ ++QLL LL
Sbjct: 958 NVIWDAKQQLLDLL 971
Score = 40 (19.1 bits), Expect = 7.2e-20, Sum P(3) = 7.2e-20
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 159 GQC--IEPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIE 199
G C +E R FP++ + +++ DF+ R +E
Sbjct: 552 GICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVE 594
Score = 39 (18.8 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 370 LGSLKLAFEVLSGKNASGPSSQMKLSTP 397
+G+LK A E L PS ++L P
Sbjct: 1108 IGALKPALEDLITVACDNPSDILRLEEP 1135
Score = 39 (18.8 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 320 FDIDDNELDALSDSETESETEILGEDEKLVEQKCPMDGDDPV-DV 363
+D LD L + E I E V+++ +DGDDPV DV
Sbjct: 961 WDAKQQLLDLLQQAGFPEECMISHE----VDER--IDGDDPVLDV 999
Score = 37 (18.1 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 292 KEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDA 329
+++ EA+ + +R+S D Q D NE +A
Sbjct: 117 QDLGEAYRPLNHDGGDGGNRYSVIDRIQEQRDMNEAEA 154
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 283 (104.7 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 66/190 (34%), Positives = 102/190 (53%)
Query: 435 GALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKK 494
G VLPL++ L AAQ +VF+ G R ++STN+AETS+TI GI++VVD+G+ K
Sbjct: 406 GRWVVLPLHSTLSVAAQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMS 465
Query: 495 YNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVP 554
Y+ ++ + WIS+ C+RLY+ + ++ P + EI +V
Sbjct: 466 YDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAP-YPVPEIRRVA 524
Query: 555 VDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYP 614
+D +VL MKSM++ FPF PP +L A L+ ALD + LT +G +A P
Sbjct: 525 LDALVLQMKSMSVGDPRTFPFIEPPPAASLETAILYLRDQGALDGSEALTPIGSLLAQLP 584
Query: 615 MSPRHSRMLL 624
+ +ML+
Sbjct: 585 VDIVIGKMLV 594
Score = 272 (100.8 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 78/254 (30%), Positives = 131/254 (51%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
+R ++ R LPI I++ + ++ V++ G+TGCGK+TQVPQ+L AGF C
Sbjct: 150 ARLARLQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVAC 209
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
TQPRR+A ++ AKRV E G +VG+Q+R + + I F+T G+L
Sbjct: 210 ---------TQPRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLL 260
Query: 142 LRELKA-----LY------EKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFI 186
LR ++ Y E ++ L + + R+ P LK+ILMSAT+ F
Sbjct: 261 LRHVQREPTLPQYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFS 320
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKR-----TEIVDYIG-QAYKKVM-SIHKRLP--- 236
+ F P+++VP R FP+TV + + ++ + + + +V+ +I + P
Sbjct: 321 A---YFGQAPVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDSKYPPEE 377
Query: 237 QGGILVFVTGQREV 250
+G +LVF++G E+
Sbjct: 378 RGDLLVFLSGLAEI 391
Score = 38 (18.4 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 735 FCNEYALHLKTMEEMSKLRKQLLHLL 760
+C + + EM+ LR+Q LL
Sbjct: 664 WCRREGIEEHRLYEMANLRRQFKELL 689
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 266 (98.7 bits), Expect = 9.1e-43, Sum P(4) = 9.1e-43
Identities = 71/193 (36%), Positives = 107/193 (55%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
RK LP + +I++AV +N ++I G TGCGKTTQVPQ L + S C+S S RI
Sbjct: 150 RKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAI-SRGCAS-SCRIIC 207
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVR-HDKKIGDSCSIKFMTDGILLRELKA-- 147
TQPRR++ +A A+ V++E LG VG+Q+R +K + SI + T G+LL++L++
Sbjct: 208 TQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDP 267
Query: 148 ---------LYEKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGRLFRN 194
L E ++ + + + + P LK+ILMSAT+R +DF F N
Sbjct: 268 LMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCD---YFNN 324
Query: 195 PPIIEVPTRQFPV 207
P+ + FPV
Sbjct: 325 CPMFRIEGVMFPV 337
Score = 253 (94.1 bits), Expect = 9.1e-43, Sum P(4) = 9.1e-43
Identities = 58/190 (30%), Positives = 96/190 (50%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
+ V PL++++ + Q VF G+R V++ST +AETS+TI + YV+++GR K Y+
Sbjct: 457 MAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYD 516
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
I+S + W++K CY L+S A + + D EI + ++
Sbjct: 517 IETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDR-MDDIPTPEILRSKLE 575
Query: 557 GVVLLMKSMNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYP 614
++L +K ++ID F P A+ LK +EALD G LT LG +A P
Sbjct: 576 SIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLP 635
Query: 615 MSPRHSRMLL 624
+ P+ +M+L
Sbjct: 636 IDPQMGKMIL 645
Score = 59 (25.8 bits), Expect = 9.1e-43, Sum P(4) = 9.1e-43
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSK-SPVE--FC 736
AL + P LGK + K A+ N SD L V + + S+ S E FC
Sbjct: 662 ALSFKSPF--YSPLGKESRVDEIKRRMAR--NMRSDHLMVHNTIIAYRDSRYSHAERDFC 717
Query: 737 NEYALHLKTMEEMSKLRKQLLHLLFN 762
+ L T++++ +++ Q LL+N
Sbjct: 718 YKNFLSSMTLQQLERMKNQFSELLYN 743
Score = 52 (23.4 bits), Expect = 9.1e-43, Sum P(4) = 9.1e-43
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 212 SKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRK 259
S+ E +D+I V I + P+G ILVF+ G ++ L + L K
Sbjct: 400 SEGCEDIDFIADL---VYYICENEPEGAILVFLPGYDKISQLYNILDK 444
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 311 (114.5 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 68/186 (36%), Positives = 106/186 (56%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL+A LP AAQ RVF R ++++TN+AETS+T+ G++YVVD G+ K+K++ +
Sbjct: 438 VLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAETSVTVSGVRYVVDCGKAKIKQFRTR 497
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
G++S ++ ISK CYRLY+ + L + + EI + +
Sbjct: 498 LGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYL-ALDEVNTPEILRCDLSQA 556
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
+L MK+ +D V FPF T P AL +A L ++EALD G+++ G +A P++P
Sbjct: 557 ILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSIEALDETGKISETGSHIAKLPLTPT 616
Query: 619 HSRMLL 624
R+LL
Sbjct: 617 LGRVLL 622
Score = 163 (62.4 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 39/96 (40%), Positives = 56/96 (58%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGF------------GS 78
RK+LPI EI + + N +++ GETG GK+TQ+PQFL + + GS
Sbjct: 144 RKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDESWCRPTKTTIVQENGS 203
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLG 114
+ + G I +TQPRRVA ++ A+RVA E+G LG
Sbjct: 204 KKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLG 239
Score = 147 (56.8 bits), Expect = 9.6e-41, Sum P(3) = 9.6e-41
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 77 GSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGK-----EVGFQVRHDKKIGDSC 131
GS + + G I +TQPRRVA ++ A+RVA E+G LG +VG+ VR D + S
Sbjct: 202 GSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTSVSPST 261
Query: 132 SIKFMTDGILLREL 145
+KF+T+G+LL+E+
Sbjct: 262 RVKFLTEGMLLQEM 275
Score = 103 (41.3 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 170 PLKLILMSATLRVED----FISG--GRLFRNPP--------IIEVPTRQFPVTVHFSKRT 215
PLK ++MSAT +E F+ G R + + + RQFPV +S
Sbjct: 321 PLKAVVMSATADMESLQEFFVEGYKARELQKEEKSEKDGIAVCHIKGRQFPVKTIYSPEP 380
Query: 216 EIVDYIGQAYKKVMSIHKRLP-QGGILVFVTGQREVEYL 253
+ D++ A K + IH + P G ILVF+TGQ VE L
Sbjct: 381 -VHDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVEAL 418
Score = 55 (24.4 bits), Expect = 2.1e-37, Sum P(3) = 2.1e-37
Identities = 35/153 (22%), Positives = 60/153 (39%)
Query: 265 LVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYST-EQQTDRFSSYDEDQF-DI 322
LV+ +E +G + +AT D M+ + E F ++GY E Q + S D I
Sbjct: 309 LVSGKREGRGGVPLKAVVMSATAD--MESLQEFF-VEGYKARELQKEEKSEKDGIAVCHI 365
Query: 323 DDNELDALSDSETESETEILGEDEKLVEQ---KCPMDGDDPVDVLKENWSLGSLKLAFEV 379
+ + E + + K++ Q K P+ GD V + + L E
Sbjct: 366 KGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVEALENLVNEY 425
Query: 380 LSGKNASGPSSQMKLSTPAIPEQCTELPPTPTP 412
+G + S P Q+ A+P+ + P P
Sbjct: 426 ATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAP 458
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 257 (95.5 bits), Expect = 2.2e-42, Sum P(4) = 2.2e-42
Identities = 63/210 (30%), Positives = 106/210 (50%)
Query: 417 ELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSL 476
E+S + + D A +L L++ +PA Q +VF G R +V++TN+AE+++
Sbjct: 587 EISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAV 646
Query: 477 TIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSA 536
TI + YV+D+GR K K Y+ N + + + W+SK CY LYS
Sbjct: 647 TIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKL 706
Query: 537 VFNNILPDFSCAEISKVPVDGVVLLMKSMNID-KVSNF--PFPTPPEVTALVEAERCLKA 593
+ LP++ E+ ++PVD + L +K ++ + V++F PP ++ A LK
Sbjct: 707 RAAS-LPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKD 765
Query: 594 LEALDSNGRLTALGKAMAHYPMSPRHSRML 623
+ AL LT LG+ P+ PR S+M+
Sbjct: 766 IGALTPEEELTELGQKFGQLPVHPRISKMI 795
Score = 252 (93.8 bits), Expect = 2.2e-42, Sum P(4) = 2.2e-42
Identities = 72/204 (35%), Positives = 104/204 (50%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E+ R LPI I+ AV N V+I GETGCGKTTQVPQ+L + + S + +
Sbjct: 209 EIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKK---EA 265
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+I TQPRR++ ++ + R+++E G +G+ VG++VR + G S+ F T+GILLR L
Sbjct: 266 CKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVL 325
Query: 146 --KALYEKQQQLLRS-GQCIEPKDR-----------VFP----LKLILMSATLRVEDFIS 187
K + + I +D + P L+LILMSATL E F
Sbjct: 326 IGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERF-- 383
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHF 211
F P++ VP +PV F
Sbjct: 384 -SEYFGGCPVVRVPGFTYPVRTFF 406
Score = 83 (34.3 bits), Expect = 2.2e-42, Sum P(4) = 2.2e-42
Identities = 24/80 (30%), Positives = 36/80 (45%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSP---VEFC 736
A D +DP G RK AK A SD L A QC++ +K+ EFC
Sbjct: 813 AADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAKEFC 872
Query: 737 NEYALHLKTMEEMSKLRKQL 756
++Y + M+ + L ++L
Sbjct: 873 SKYFISQVVMKRLDDLCRKL 892
Score = 47 (21.6 bits), Expect = 2.2e-42, Sum P(4) = 2.2e-42
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 214 RTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKL 257
+ E VD +G K + I G ILVF+ G E+ KL
Sbjct: 553 KPEEVD-VGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKL 595
Score = 40 (19.1 bits), Expect = 6.1e-38, Sum P(4) = 6.1e-38
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 664 GTQTNSNDSELEERDNALDSEDPMCRQEKLGKRKL-KEVAKLSHAKFSNPTSDVLT 718
G + S S L + DS ++ K KRKL +++ + P+++VL+
Sbjct: 1503 GKEKESIPSNLVSGNEQPDSNTAPAKKPKKKKRKLANNFDSVNNMEEKMPSTNVLS 1558
Score = 40 (19.1 bits), Expect = 9.4e-16, Sum P(4) = 9.4e-16
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 255 SKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFE 299
SK RK+ L + +++K + + ++E K N ++ E
Sbjct: 1358 SKKRKSGNNLDLGKMEKSKPSDLANENEQTEPKSANNLDLGNMKE 1402
Score = 39 (18.8 bits), Expect = 5.7e-16, Sum P(3) = 5.7e-16
Identities = 25/114 (21%), Positives = 49/114 (42%)
Query: 255 SKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINM----KEINEAFEIQGYSTEQQTD 310
SK K+ L + + +ENK + + +E + +N KE E+ S +Q D
Sbjct: 1463 SKKCKSVNNLDLGNMEENKPSDLANGNEQKDPESVNRLDPGKE-KESIPSNLVSGNEQPD 1521
Query: 311 RFSSYDEDQFDIDD---NELDALSDSETES-ETEILGEDEK--LVEQKCPMDGD 358
++ + N D++++ E + T +L + K L+E+K + D
Sbjct: 1522 SNTAPAKKPKKKKRKLANNFDSVNNMEEKMPSTNVLSQGNKSGLIEEKPSIPSD 1575
Score = 38 (18.4 bits), Expect = 1.9e-20, Sum P(4) = 1.9e-20
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 135 FMTDGILLRELKALYEKQQQLLRSGQCI 162
F DGI + + +YE + Q + G I
Sbjct: 75 FKGDGISKSDKRRMYEARNQKEKEGDGI 102
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 276 (102.2 bits), Expect = 3.5e-42, Sum P(3) = 3.5e-42
Identities = 58/188 (30%), Positives = 101/188 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++PL++++P Q +VF+ G R +V++TN+AETS+TI + YV+D G+ K +++
Sbjct: 513 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 572
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N I + +W+SK HCY LY+ + ++L D+ EI + P++ +
Sbjct: 573 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEEL 631
Query: 559 VLLMKSMNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + ++ F PP A+V + + L L ALD LT LG +A P+
Sbjct: 632 CLQIKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 691
Query: 617 PRHSRMLL 624
P +M+L
Sbjct: 692 PHIGKMIL 699
Score = 239 (89.2 bits), Expect = 3.5e-42, Sum P(3) = 3.5e-42
Identities = 77/218 (35%), Positives = 115/218 (52%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLF----EAGFGSNRC 81
E++ RK LP M++E++ +N++ +I GETGCGKTTQV QF+ E G GS C
Sbjct: 191 EMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGIGS-AC 249
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGK--EVGFQVRHDKKIG-DSCSIKFMTD 138
RI TQPRR++ ++ A+RVA E G G+Q+R ++ SI + T
Sbjct: 250 -----RIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTT 304
Query: 139 GILLRELKA-----------LYEKQQQLLRSGQCIEP-KDRVF---PLKLILMSATLRVE 183
GI+L+ L++ L E ++ L+S + KD + LK+ILMSATL E
Sbjct: 305 GIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAE 364
Query: 184 DFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYI 221
F F N P+I +P FPV + + +I++ I
Sbjct: 365 KF---SEYFGNCPMIHIPGFTFPVVEYLLE--DIIEKI 397
Score = 67 (28.6 bits), Expect = 3.5e-42, Sum P(3) = 3.5e-42
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKS-----PVE 734
+L +DP LGK K+ + + AK + SD LTV A + +E +K +
Sbjct: 716 SLSFKDPFVIP--LGKEKIADARRKELAKETR--SDHLTVVNAFEGWEEAKRRGFRYEKD 771
Query: 735 FCNEYALHLKTMEEMSKLRKQLL-HLL 760
+C EY L T++ + ++ Q HLL
Sbjct: 772 YCWEYFLSSNTLQMLHNMKGQFAEHLL 798
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 270 (100.1 bits), Expect = 4.9e-42, Sum P(4) = 4.9e-42
Identities = 62/205 (30%), Positives = 101/205 (49%)
Query: 423 VEKMGDNKRAGVGA-LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGI 481
+EK+ N G + VLPL+ +P Q +F+ +R +V++TN+AE+S+TI +
Sbjct: 520 LEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDV 579
Query: 482 KYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNI 541
YVVD G+ K Y++ N + WISK CYRLY +++
Sbjct: 580 VYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYD-A 638
Query: 542 LPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDS 599
P + EI + P+ + L +KS+ + + +F PP+ A+ A LK + AL+
Sbjct: 639 FPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALND 698
Query: 600 NGRLTALGKAMAHYPMSPRHSRMLL 624
LT LG+ + P+ P +MLL
Sbjct: 699 VEELTPLGRHLCTLPVDPNIGKMLL 723
Score = 257 (95.5 bits), Expect = 4.9e-42, Sum P(4) = 4.9e-42
Identities = 68/197 (34%), Positives = 105/197 (53%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP M++E + +V+ N +++ GETGCGKTTQ+PQF+ E S R + + I
Sbjct: 225 REKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCN--IIC 282
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL----- 145
TQPRR++ ++ A R++ E G +G+ VG+Q+R + K D + F T G+LLR L
Sbjct: 283 TQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPN 342
Query: 146 --KALYEKQQQLLRSGQ-----CIEPKDRVFP----LKLILMSATLRVEDFISGGRLFRN 194
+ ++ G I +D + P L+LILMSAT+ + F + F N
Sbjct: 343 LTNVSHLLVDEIHERGMNEDFLLIILRD-LLPRRPDLRLILMSATINADMFST---YFGN 398
Query: 195 PPIIEVPTRQFPVTVHF 211
P + +P FPV F
Sbjct: 399 SPTMHIPGFTFPVAELF 415
Score = 54 (24.1 bits), Expect = 4.9e-42, Sum P(4) = 4.9e-42
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 234 RLPQGG-ILVFVTGQREVEYLCSKLRKASKQLLVNSSK 270
RL GG ILVF+TG E+ L K+ L +SSK
Sbjct: 499 RLEGGGAILVFLTGWDEISKLLEKINM--NNFLGDSSK 534
Score = 43 (20.2 bits), Expect = 4.9e-42, Sum P(4) = 4.9e-42
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 699 KEVAKLSHAKFSNPT-SDVLTVAYALQCFELSK---SPVEFCNEYALHLKTMEEMSKLRK 754
KE A + F+ + SD + + A + + +K + +FC + L T+ M +R
Sbjct: 754 KEEADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRN 813
Query: 755 QLLHLL 760
Q L LL
Sbjct: 814 QFLDLL 819
Score = 41 (19.5 bits), Expect = 1.8e-18, Sum P(4) = 1.8e-18
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 393 KLSTPAIPE-QCTELPPTPTPEQCPELSSPDVEKMG 427
K+ A P+ Q E+ TP E C + S V +G
Sbjct: 633 KVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVGSIG 668
Score = 38 (18.4 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 334 ETESETEILGEDE--KLVEQKCPMDGDDPVDVLKENWSLG 371
+ ++E E+L E+E +EQ G + ++K N+S G
Sbjct: 54 QQQAEMEVLDENEWWNKIEQW--KTGGEQEMLIKRNFSRG 91
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 276 (102.2 bits), Expect = 5.7e-42, Sum P(3) = 5.7e-42
Identities = 58/188 (30%), Positives = 101/188 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++PL++++P Q +VF+ G R +V++TN+AETS+TI + YV+D G+ K +++
Sbjct: 514 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 573
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N I + +W+SK HCY LY+ + ++L D+ EI + P++ +
Sbjct: 574 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEEL 632
Query: 559 VLLMKSMNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + ++ F PP A+V + + L L ALD LT LG +A P+
Sbjct: 633 CLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 692
Query: 617 PRHSRMLL 624
P +M+L
Sbjct: 693 PHIGKMIL 700
Score = 237 (88.5 bits), Expect = 5.7e-42, Sum P(3) = 5.7e-42
Identities = 73/214 (34%), Positives = 113/214 (52%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E++ RK LP M++E++ +N++ +I GETGCGKTTQV QF+ + R +
Sbjct: 192 EMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYI--ERGKGSA 249
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGK--EVGFQVRHDKKIG-DSCSIKFMTDGILL 142
RI TQPRR++ ++ A+RVA E G G+Q+R ++ SI + T GI+L
Sbjct: 250 CRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 309
Query: 143 RELKA-----------LYEKQQQLLRSGQCIEP-KDRVF---PLKLILMSATLRVEDFIS 187
+ L++ L E ++ L+S + KD + LK+ILMSATL E F
Sbjct: 310 QWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKF-- 367
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYI 221
F N P+I +P FPV + + +I++ I
Sbjct: 368 -SEYFGNCPMIHIPGFTFPVVEYLLE--DIIEKI 398
Score = 67 (28.6 bits), Expect = 5.7e-42, Sum P(3) = 5.7e-42
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKS-----PVE 734
+L +DP LGK K+ + + AK + SD LTV A + +E +K +
Sbjct: 717 SLSFKDPFVIP--LGKEKIADARRKELAKETR--SDHLTVVNAFEGWEEAKRRGFRYEKD 772
Query: 735 FCNEYALHLKTMEEMSKLRKQLL-HLL 760
+C EY L T++ + ++ Q HLL
Sbjct: 773 YCWEYFLSSNTLQMLHNMKGQFAEHLL 799
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 279 (103.3 bits), Expect = 9.1e-42, Sum P(3) = 9.1e-42
Identities = 58/188 (30%), Positives = 103/188 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++PL++++P Q +VF+ G R +V++TN+AETS+TI + YV+D G+ K +++
Sbjct: 523 IIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 582
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N I + +W+SK HCY LY+S + ++L D+ EI + P++ +
Sbjct: 583 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNS-LRASLLDDYQLPEILRTPLEEL 641
Query: 559 VLLMKSMNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + +++F PP A++ + + L L ALD LT LG +A P+
Sbjct: 642 CLQIKILRLGGIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVE 701
Query: 617 PRHSRMLL 624
P +M+L
Sbjct: 702 PHIGKMIL 709
Score = 231 (86.4 bits), Expect = 9.1e-42, Sum P(3) = 9.1e-42
Identities = 74/234 (31%), Positives = 119/234 (50%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E++ R+ LP M++E++ ++++ +I GETGCGKTTQV QF+ + R +
Sbjct: 201 EMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYI--ERGKGSA 258
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGK--EVGFQVRHDKKIG-DSCSIKFMTDGILL 142
RI TQPRR++ ++ A+RVA E G G+Q+R ++ SI + T GI+L
Sbjct: 259 CRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 318
Query: 143 RELKA-----------LYEKQQQLLRSGQCIEP-KDRVF--P-LKLILMSATLRVEDFIS 187
+ L++ L E ++ L+S + KD + P LK++LMSATL E F
Sbjct: 319 QWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKF-- 376
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRT-EIVDYIGQAYKKVMSIHKRLPQGGI 240
F N P+I +P FPV + + E + Y+ + + K QG +
Sbjct: 377 -SEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKKGFMQGHV 429
Score = 68 (29.0 bits), Expect = 9.1e-42, Sum P(3) = 9.1e-42
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKS-----PVE 734
+L +DP LGK K+ + + AK + SD LTV A + +E +K +
Sbjct: 726 SLSFKDPFVIP--LGKEKVADARRKELAK--DTKSDHLTVVNAFKGWEKAKQRGFRYEKD 781
Query: 735 FCNEYALHLKTMEEMSKLRKQLL-HLL 760
+C EY L T++ + ++ Q HLL
Sbjct: 782 YCWEYFLSSNTLQMLHNMKGQFAEHLL 808
Score = 54 (24.1 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 18/82 (21%), Positives = 40/82 (48%)
Query: 274 GNQVVADSEPNATKDINMKE---INEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDAL 330
G + A+++PN+ K++ +E IN+ E + + D++ D + + +NE DA
Sbjct: 128 GTEAPAENKPNSVKNVEHQEKKMINQ--EKRPFRIR---DKYIDRDSEYL-LQENEPDAT 181
Query: 331 SDSETESETEILGEDEKLVEQK 352
D + + + D + +E +
Sbjct: 182 LDQQLLEDLQKKKTDLRYIEMQ 203
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 258 (95.9 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 72/197 (36%), Positives = 108/197 (54%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
RK LP + +++A+ N V++ GETGCGKTTQ+PQ++ E+ + R ++ S I
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCS--IIC 353
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL---KA 147
TQPRR++ ++ ++RVA E G +G+ VG++VR + G + F T G+LLR L ++
Sbjct: 354 TQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRS 413
Query: 148 L----YEKQQQLLRSGQ-----CIEPKDRVFP----LKLILMSATLRVEDFISGGRLFRN 194
L + ++ G I KD + P LKLILMSATL E F S F
Sbjct: 414 LKGVTHVVVDEIHERGMNEDFLLIVLKD-LLPRRPDLKLILMSATLNAELFSS---YFGG 469
Query: 195 PPIIEVPTRQFPVTVHF 211
P + +P +PV HF
Sbjct: 470 APAMHIPGFTYPVRAHF 486
Score = 253 (94.1 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 57/188 (30%), Positives = 94/188 (50%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+L + + ++ Q +F+ EG R +V++TN+AETS+TI + YV+D G+ K Y++
Sbjct: 612 LLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDAL 671
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N WISK CY LY V+ D+ E+ + P+ +
Sbjct: 672 NNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYE-AFADYQQPELLRTPLQSL 730
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +KS+ + +S F PPE ++ A LK + ALD + LT LGK ++ P+
Sbjct: 731 CLQIKSLGLGSISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVE 790
Query: 617 PRHSRMLL 624
P+ +ML+
Sbjct: 791 PKLGKMLI 798
Score = 71 (30.1 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 699 KEVAKLSHAKFSNPT-SDVLTVAYALQCF---ELSKSPVEFCNEYALHLKTMEEMSKLRK 754
K++A+ + +KFS SD LT+ A + E + S ++C + L +T++ M +RK
Sbjct: 829 KDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRK 888
Query: 755 QLLHLL 760
Q +LL
Sbjct: 889 QFFNLL 894
Score = 48 (22.0 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 238 GGILVFVTGQREVEYLCSKLRKAS------KQLLV--NSSKENKGNQVVADSEPNATKDI 289
G +LVF+TG ++ L ++L S K LL+ + S + +++ D P + I
Sbjct: 579 GAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKI 638
Query: 290 ----NMKEINEAFEIQGYSTEQQTDRFSSYD 316
NM E + Y + + +SYD
Sbjct: 639 VLATNMAETSITINDVVYVIDCGKAKETSYD 669
Score = 40 (19.1 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 243 FVTGQREVEYL-CSKLRKASKQLLVNSSKENKGNQV 277
FV G++ + KL+ QL NS EN NQ+
Sbjct: 1071 FVYGRKALSPTPAKKLKDVGAQLQ-NSGGENNKNQL 1105
Score = 39 (18.8 bits), Expect = 3.6e-17, Sum P(3) = 3.6e-17
Identities = 11/25 (44%), Positives = 11/25 (44%)
Query: 552 KVPVDGVVLLMKSMNIDKVSNFPFP 576
K DG VLL S V PFP
Sbjct: 941 KTMEDGQVLLYSSSVNGNVPMIPFP 965
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 275 (101.9 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 58/188 (30%), Positives = 101/188 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++PL++++P Q +VF+ G R +V++TN+AETS+TI + YV+D G+ K +++
Sbjct: 435 IIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 494
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N I + +W+SK HCY LY+ + ++L D+ EI + P++ +
Sbjct: 495 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEEL 553
Query: 559 VLLMKSMNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + ++ F PP A++ + R L L ALD LT LG +A P+
Sbjct: 554 CLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVE 613
Query: 617 PRHSRMLL 624
P +M+L
Sbjct: 614 PHIGKMIL 621
Score = 232 (86.7 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 78/235 (33%), Positives = 123/235 (52%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E+++ R+ LP M++E++ ++++ +I GETGCGKTTQV QF+ + R +
Sbjct: 113 EMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYI--ERGKGSA 170
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGK--EVGFQVRHDKKIG-DSCSIKFMTDGILL 142
RI TQPRR++ ++ A+RVA E G G+Q+R ++ SI + T GI+L
Sbjct: 171 CRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 230
Query: 143 RELKA-----------LYEKQQQLLRSGQCIEP-KDRV-F--PLKLILMSATLRVEDFIS 187
+ L++ L E ++ L+S + KD + F LK+ILMSATL E F
Sbjct: 231 QWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKF-- 288
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRT-EIVDYIGQAYKKVMSIHKR-LPQGGI 240
F N P+I +P FPV + + E + Y+ + K+ S KR QG +
Sbjct: 289 -SEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQ-KEHRSQFKRGFMQGHV 341
Score = 65 (27.9 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKS-----PVE 734
+L +DP LGK K+ + + AK + SD LTV A + +E ++ +
Sbjct: 638 SLSFKDPFVIP--LGKEKIADARRKELAK--DTRSDHLTVVNAFEGWEEARRRGFRYEKD 693
Query: 735 FCNEYALHLKTMEEMSKLRKQLL-HLL 760
+C EY L T++ + ++ Q HLL
Sbjct: 694 YCWEYFLSSNTLQMLHNMKGQFAEHLL 720
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 270 (100.1 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 64/192 (33%), Positives = 99/192 (51%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LPLY L Q +VF G+R VV++TN+AETS+TI + V+D+G K+ YN
Sbjct: 254 LFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYN 313
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+ S + IS+ CYRLYS F P ++ EI + +
Sbjct: 314 PLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQREP-YTLEEIYRTDLS 372
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VV+ M + I +F F +PP ++ AE L+ L AL+ + L+ +GK M +P+
Sbjct: 373 EVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRLLGALEDDRSLSEIGKMMCLFPLG 432
Query: 617 PRHSRMLLTLIQ 628
PR SRM++ ++
Sbjct: 433 PRQSRMIVEALR 444
Score = 219 (82.2 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 64/196 (32%), Positives = 103/196 (52%)
Query: 32 KDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVT 91
K LP+ + +I+ A+ + +++ TG GKTTQ+P L EAG+ + G IGVT
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGY------NEGGAIGVT 58
Query: 92 QPRRVAVLATAKRVAFELGLHLGKE-VGFQVRHDKKIGDSCSIKFMTDGILLRELK---- 146
QPRR+AVL+ ++ +A ++ LH+ VG+++R + IK MTDGILL+E+K
Sbjct: 59 QPRRIAVLSVSEFIAKQV-LHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPL 117
Query: 147 -ALY------EKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGRLFRNP 195
+ Y E ++ L + RV ++++ SAT+ F R F
Sbjct: 118 LSKYSIIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMF---SRYFNEC 174
Query: 196 PIIEVPTRQFPVTVHF 211
P+I++ +PVTV F
Sbjct: 175 PVIKIDAVAYPVTVIF 190
Score = 76 (31.8 bits), Expect = 2.6e-41, Sum P(3) = 2.6e-41
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
+E K +H FS+P D ++ + + + FC + L + M E+S +++QL
Sbjct: 473 EEKTKKAHGTFSDPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEISNIKEQL 530
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 274 (101.5 bits), Expect = 3.1e-41, Sum P(3) = 3.1e-41
Identities = 66/191 (34%), Positives = 103/191 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++PLYA L A Q ++F+ G R +V++TNVAETSLT+PGIKYV+D G ++ +Y+
Sbjct: 331 IVPLYARLSAGEQNKIFQP-HAGRR-IVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 388
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ I+ IS+ C RLYS F + P+F+ EI + + V
Sbjct: 389 TKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLS-RPEFTDPEILRTNLASV 447
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEAL-----DSNGRLTALGKAMAHY 613
+L M ++ + + FPF P+ + + R L+ L A+ D RLT GK +A
Sbjct: 448 ILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARL 507
Query: 614 PMSPRHSRMLL 624
P+ PR +RM+L
Sbjct: 508 PIDPRLARMVL 518
Score = 260 (96.6 bits), Expect = 3.1e-41, Sum P(3) = 3.1e-41
Identities = 72/193 (37%), Positives = 102/193 (52%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LP+ +I +A+ + VI+ GETG GKTTQ+P+ E G G + G IG TQP
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRG------KYGLIGHTQP 140
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK------- 146
RR+A + A R+A E+ LG VG++VR +I D IK MTDGILL E++
Sbjct: 141 RRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQ 200
Query: 147 ----ALYEKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGRLFRNPPII 198
+ E ++ L + ++ P LK+I+ SAT+ E F + F N PII
Sbjct: 201 YDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERF---SKHFSNAPII 257
Query: 199 EVPTRQFPVTVHF 211
EV R +PV V +
Sbjct: 258 EVSGRTYPVEVRY 270
Score = 44 (20.5 bits), Expect = 3.1e-41, Sum P(3) = 3.1e-41
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 715 DVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
D+L A++ + K PV+ N+ LH+ +E ++ K+LL+
Sbjct: 1219 DILRYMRAIER-RMEKLPVD-PNKDRLHMLKIESVANKYKELLN 1260
Score = 44 (20.5 bits), Expect = 2.4e-17, Sum P(3) = 2.4e-17
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 325 NELDALSDSETESETEILGEDEKLVEQKCPMDGDDPVDVLKENWSLGSL----KLAFEVL 380
N DA T E +L EK + + M G V VL+E+W L L K+ + +
Sbjct: 934 NYADAFLARVTPFEMPLLDAMEKELRR---MTG---VTVLREDWKLDQLPAHLKITYRAV 987
Query: 381 SGKN 384
+N
Sbjct: 988 DHRN 991
Score = 44 (20.5 bits), Expect = 2.4e-17, Sum P(3) = 2.4e-17
Identities = 36/195 (18%), Positives = 79/195 (40%)
Query: 206 PVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLL 265
P+ H SKR+ + + VM+ K + G + + +R V Y S+++
Sbjct: 705 PLAKHLSKRSYSEPHWSKKNAAVMAYEKVMLYG---IPIVPKRLVNYGTID-PVLSREIF 760
Query: 266 VNSSK-ENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFD--I 322
+ S+ E A + N ++E+ + + + + F YD+ +
Sbjct: 761 IRSALVEGDWETKHAFFKQNRALLAEVEELEHKSRRRDILVDDE-ELFQFYDQRVGTEVV 819
Query: 323 DDNELDALSDSETESETEILGEDEKLVEQKCPMDGDDPVDVLKEN-WSLGSLKL--AFEV 379
DA + + ++L +++++ + D D+ N W G+LKL +++
Sbjct: 820 SGRHFDAWWKTASRKTPDLLSFEKEMLFKG---DASHITDLDYPNFWHQGNLKLKLSYQF 876
Query: 380 LSGKNASGPSSQMKL 394
G+N+ G + + L
Sbjct: 877 EPGENSDGVTVHIPL 891
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 274 (101.5 bits), Expect = 3.1e-41, Sum P(3) = 3.1e-41
Identities = 66/191 (34%), Positives = 103/191 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++PLYA L A Q ++F+ G R +V++TNVAETSLT+PGIKYV+D G ++ +Y+
Sbjct: 331 IVPLYARLSAGEQNKIFQP-HAGRR-IVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 388
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ I+ IS+ C RLYS F + P+F+ EI + + V
Sbjct: 389 TKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLS-RPEFTDPEILRTNLASV 447
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEAL-----DSNGRLTALGKAMAHY 613
+L M ++ + + FPF P+ + + R L+ L A+ D RLT GK +A
Sbjct: 448 ILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARL 507
Query: 614 PMSPRHSRMLL 624
P+ PR +RM+L
Sbjct: 508 PIDPRLARMVL 518
Score = 260 (96.6 bits), Expect = 3.1e-41, Sum P(3) = 3.1e-41
Identities = 72/193 (37%), Positives = 102/193 (52%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LP+ +I +A+ + VI+ GETG GKTTQ+P+ E G G + G IG TQP
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRG------KYGLIGHTQP 140
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK------- 146
RR+A + A R+A E+ LG VG++VR +I D IK MTDGILL E++
Sbjct: 141 RRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQ 200
Query: 147 ----ALYEKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGRLFRNPPII 198
+ E ++ L + ++ P LK+I+ SAT+ E F + F N PII
Sbjct: 201 YDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERF---SKHFSNAPII 257
Query: 199 EVPTRQFPVTVHF 211
EV R +PV V +
Sbjct: 258 EVSGRTYPVEVRY 270
Score = 44 (20.5 bits), Expect = 3.1e-41, Sum P(3) = 3.1e-41
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 715 DVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLH 758
D+L A++ + K PV+ N+ LH+ +E ++ K+LL+
Sbjct: 1219 DILRYMRAIER-RMEKLPVD-PNKDRLHMLKIESVANKYKELLN 1260
Score = 44 (20.5 bits), Expect = 2.4e-17, Sum P(3) = 2.4e-17
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 325 NELDALSDSETESETEILGEDEKLVEQKCPMDGDDPVDVLKENWSLGSL----KLAFEVL 380
N DA T E +L EK + + M G V VL+E+W L L K+ + +
Sbjct: 934 NYADAFLARVTPFEMPLLDAMEKELRR---MTG---VTVLREDWKLDQLPAHLKITYRAV 987
Query: 381 SGKN 384
+N
Sbjct: 988 DHRN 991
Score = 44 (20.5 bits), Expect = 2.4e-17, Sum P(3) = 2.4e-17
Identities = 36/195 (18%), Positives = 79/195 (40%)
Query: 206 PVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQLL 265
P+ H SKR+ + + VM+ K + G + + +R V Y S+++
Sbjct: 705 PLAKHLSKRSYSEPHWSKKNAAVMAYEKVMLYG---IPIVPKRLVNYGTID-PVLSREIF 760
Query: 266 VNSSK-ENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFD--I 322
+ S+ E A + N ++E+ + + + + F YD+ +
Sbjct: 761 IRSALVEGDWETKHAFFKQNRALLAEVEELEHKSRRRDILVDDE-ELFQFYDQRVGTEVV 819
Query: 323 DDNELDALSDSETESETEILGEDEKLVEQKCPMDGDDPVDVLKEN-WSLGSLKL--AFEV 379
DA + + ++L +++++ + D D+ N W G+LKL +++
Sbjct: 820 SGRHFDAWWKTASRKTPDLLSFEKEMLFKG---DASHITDLDYPNFWHQGNLKLKLSYQF 876
Query: 380 LSGKNASGPSSQMKL 394
G+N+ G + + L
Sbjct: 877 EPGENSDGVTVHIPL 891
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 275 (101.9 bits), Expect = 4.1e-41, Sum P(3) = 4.1e-41
Identities = 58/188 (30%), Positives = 101/188 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++PL++++P Q +VF+ G R +V++TN+AETS+TI + YV+D G+ K +++
Sbjct: 521 IIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 580
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N I + +W+SK HCY LY+ + ++L D+ EI + P++ +
Sbjct: 581 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEEL 639
Query: 559 VLLMKSMNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + ++ F PP A++ + R L L ALD LT LG +A P+
Sbjct: 640 CLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVE 699
Query: 617 PRHSRMLL 624
P +M+L
Sbjct: 700 PHIGKMIL 707
Score = 232 (86.7 bits), Expect = 4.1e-41, Sum P(3) = 4.1e-41
Identities = 78/235 (33%), Positives = 123/235 (52%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E+++ R+ LP M++E++ ++++ +I GETGCGKTTQV QF+ + R +
Sbjct: 199 EMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYI--ERGKGSA 256
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGK--EVGFQVRHDKKIG-DSCSIKFMTDGILL 142
RI TQPRR++ ++ A+RVA E G G+Q+R ++ SI + T GI+L
Sbjct: 257 CRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 316
Query: 143 RELKA-----------LYEKQQQLLRSGQCIEP-KDRV-F--PLKLILMSATLRVEDFIS 187
+ L++ L E ++ L+S + KD + F LK+ILMSATL E F
Sbjct: 317 QWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKF-- 374
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRT-EIVDYIGQAYKKVMSIHKR-LPQGGI 240
F N P+I +P FPV + + E + Y+ + K+ S KR QG +
Sbjct: 375 -SEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQ-KEHRSQFKRGFMQGHV 427
Score = 65 (27.9 bits), Expect = 4.1e-41, Sum P(3) = 4.1e-41
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKS-----PVE 734
+L +DP LGK K+ + + AK + SD LTV A + +E ++ +
Sbjct: 724 SLSFKDPFVIP--LGKEKIADARRKELAK--DTRSDHLTVVNAFEGWEEARRRGFRYEKD 779
Query: 735 FCNEYALHLKTMEEMSKLRKQLL-HLL 760
+C EY L T++ + ++ Q HLL
Sbjct: 780 YCWEYFLSSNTLQMLHNMKGQFAEHLL 806
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 270 (100.1 bits), Expect = 1.9e-40, Sum P(3) = 1.9e-40
Identities = 57/188 (30%), Positives = 100/188 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++PL++++P Q +VF+ G R +V++TN+AETS+TI + YV+D G+ K +++
Sbjct: 635 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 694
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N I + +W+SK HCY LY+ + ++L D+ EI + P++ +
Sbjct: 695 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEEL 753
Query: 559 VLLMKSMNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + ++ F PP A+ + + L L ALD LT LG +A P+
Sbjct: 754 CLQIKILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVE 813
Query: 617 PRHSRMLL 624
P +M+L
Sbjct: 814 PHIGKMIL 821
Score = 233 (87.1 bits), Expect = 1.9e-40, Sum P(3) = 1.9e-40
Identities = 75/234 (32%), Positives = 122/234 (52%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E+++ R+ LP M++E++ ++++ +I GETGCGKTTQV QF+ + R +
Sbjct: 313 EMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYI--ERGKGSA 370
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGK--EVGFQVRHDKKIG-DSCSIKFMTDGILL 142
RI TQPRR++ ++ A+RVA E G G+Q+R ++ SI + T GI+L
Sbjct: 371 CRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 430
Query: 143 RELKA-----------LYEKQQQLLRSGQCIEP-KDRV-F-P-LKLILMSATLRVEDFIS 187
+ L++ L E ++ L+S + KD + F P LK+ILMSATL E F
Sbjct: 431 QWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKF-- 488
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRT-EIVDYIGQAYKKVMSIHKRLPQGGI 240
F N P+I +P FPV + + E + Y+ + ++ + QG +
Sbjct: 489 -SEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEQRSQFKRGFMQGHV 541
Score = 65 (27.9 bits), Expect = 1.9e-40, Sum P(3) = 1.9e-40
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKS-----PVE 734
+L +DP LGK K+ + + AK + SD LTV A + +E ++ +
Sbjct: 838 SLSFKDPFVIP--LGKEKIADARRKELAK--DTKSDHLTVVNAFEGWEEARRRGFRYEKD 893
Query: 735 FCNEYALHLKTMEEMSKLRKQLL-HLL 760
+C EY L T++ + ++ Q HLL
Sbjct: 894 YCWEYFLSSNTLQMLHNMKGQFAEHLL 920
Score = 54 (24.1 bits), Expect = 6.7e-22, Sum P(3) = 6.7e-22
Identities = 16/79 (20%), Positives = 36/79 (45%)
Query: 274 GNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSDS 333
G ++ A+++PN+ K + +E + Q T + D++ D + + +NE D D
Sbjct: 240 GTEIPAENKPNSEKKLENQE--KKLISQEKRTFRIRDKYIDRDSEYL-LQENEPDVALDQ 296
Query: 334 ETESETEILGEDEKLVEQK 352
+ + D + +E +
Sbjct: 297 QLLEDLRKKKSDLRYIEMQ 315
Score = 37 (18.1 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 380 LSGKNASGPSSQMKLSTPAIPEQCTELPPTPTPEQCPELSSPDVEKMGDNKR 431
+ KN +Q+ P TE+P P +L + + + + KR
Sbjct: 217 VQAKNDKDSEAQISWFAPEDHGYGTEIPAENKPNSEKKLENQEKKLISQEKR 268
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 269 (99.8 bits), Expect = 2.2e-40, Sum P(3) = 2.2e-40
Identities = 57/188 (30%), Positives = 100/188 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++PL++++P Q +VF+ G R +V++TN+AETS+TI + +V+D G+ K +++
Sbjct: 502 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQ 561
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N I + +W+SK HCY LY+ + ++L D+ EI + P++ +
Sbjct: 562 NNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEEL 620
Query: 559 VLLMKSMNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + ++ F PP A++ A L L ALD LT LG +A P+
Sbjct: 621 CLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVE 680
Query: 617 PRHSRMLL 624
P +M+L
Sbjct: 681 PHIGKMIL 688
Score = 232 (86.7 bits), Expect = 2.2e-40, Sum P(3) = 2.2e-40
Identities = 73/202 (36%), Positives = 107/202 (52%)
Query: 26 EVENNRKDLPIVMM--EQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSS 83
E++ R+ LP M +QE++ +N+N +I GETGCGKTTQV QF+ + R
Sbjct: 178 EMQRFREKLPSYGMRQKQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYI--ERGKG 235
Query: 84 RSGRIGVTQPRRVAVLATAKRVAFELGLHLG--KEVGFQVRHDKKIG-DSCSIKFMTDGI 140
+ RI TQPRR++ ++ A+RVA E G K G+Q+R ++ SI + T GI
Sbjct: 236 STCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGI 295
Query: 141 LLRELKA-----------LYEKQQQLLRSGQCIEP-KDRV---FPLKLILMSATLRVEDF 185
+L+ L++ L E ++ L+S + KD + LK+ILMSATL E F
Sbjct: 296 VLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKF 355
Query: 186 ISGGRLFRNPPIIEVPTRQFPV 207
F N P+I +P FPV
Sbjct: 356 ---SEYFDNCPMIHIPGFTFPV 374
Score = 64 (27.6 bits), Expect = 2.2e-40, Sum P(3) = 2.2e-40
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSK-----SPVE 734
+L +DP LGK K+ + + +K N SD LTV A +E ++ + +
Sbjct: 705 SLSFKDPFVIP--LGKEKVADARRKELSK--NTKSDHLTVVNAFTGWEETRRRGFRTEKD 760
Query: 735 FCNEYALHLKTMEEMSKLRKQLL-HLL 760
+C EY L T++ + ++ Q HLL
Sbjct: 761 YCWEYFLSPNTLQMLHNMKGQFAEHLL 787
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 265 (98.3 bits), Expect = 5.7e-40, Sum P(3) = 5.7e-40
Identities = 62/186 (33%), Positives = 100/186 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL++ A Q +VF+ EG R +VSTN+AETSLT+ G+++VVD+G+ K +++
Sbjct: 404 VLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDAT 463
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + W+SK C+RLY++ +N + EI +VP+D +
Sbjct: 464 CKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYN-AFEAYPTPEIYRVPLDTM 522
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
+L M SM + V FPF PE + + LK AL ++T LG+++A+ P+
Sbjct: 523 LLQMVSMGLPDVRAFPFIEAPETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELS 582
Query: 619 HSRMLL 624
+MLL
Sbjct: 583 IGKMLL 588
Score = 260 (96.6 bits), Expect = 5.7e-40, Sum P(3) = 5.7e-40
Identities = 76/223 (34%), Positives = 118/223 (52%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R ++ +++LPI +++ EA++ + VI+ G+TGCGK+TQVPQ+L++ G+ S C
Sbjct: 135 RIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRSIAC- 193
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILL 142
TQPRR+A ++ KRVA EL G V FQ+R ++ +I F+T+G+LL
Sbjct: 194 --------TQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLL 245
Query: 143 RELKA--------------LYEKQ---QQLLRSGQCIEPKDRVFP-LKLILMSATLRVED 184
R+L ++E+ LL +C+ R P LKLILMSAT+ VE
Sbjct: 246 RQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLL---RARPQLKLILMSATINVEL 302
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKK 227
F G +++VP R FP+ + + + GQA K
Sbjct: 303 F-HGYFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQATSK 344
Score = 53 (23.7 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 195 PPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMS-IHKRLP---QGGILVFVTGQREV 250
PP +E+ Q T S+R I D + +V+S I ++ P +G +L+FV+G E+
Sbjct: 331 PPALELKAGQ--ATSKRSQRNRI-D--PAPFVQVLSLIDQQYPTSERGDVLIFVSGVNEI 385
Query: 251 EYLCSKLRK-ASKQ 263
E + + + A++Q
Sbjct: 386 ESVVEAVHEYATEQ 399
Score = 39 (18.8 bits), Expect = 5.7e-40, Sum P(3) = 5.7e-40
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 734 EFCNEYALHLKTMEEMSKLRKQLLHLL 760
++C + + E++KLR+Q +L
Sbjct: 658 QWCRRLGIEEQRFYEVTKLRQQFQRIL 684
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 249 (92.7 bits), Expect = 6.3e-40, Sum P(4) = 6.3e-40
Identities = 62/205 (30%), Positives = 111/205 (54%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPLYA L + Q ++F+ R +V++TNVAETSLT+PGIKYV+D G ++ +Y+
Sbjct: 354 VLPLYARLTVSEQNQIFKP--HSGRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 411
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ I+ +S+ C RLYS + + +F+ EI + + V
Sbjct: 412 TKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKS-RAEFTDPEILRTNLATV 470
Query: 559 VLLMKSMNIDKVSNFPFPTPPE---VT---ALVEAERCLKALEALDSNGR---------L 603
+L M ++++ ++NFPF P+ +T L+E ++++E D N + L
Sbjct: 471 ILQMHALDLGDIANFPFVEAPDNRNITDGVRLLEEIAAVESIENADKNAKGKASSTATQL 530
Query: 604 TALGKAMAHYPMSPRHSRMLLTLIQ 628
T G+ +A +P+ PR ++M+++ I+
Sbjct: 531 TKSGRLLAKFPIDPRLAKMVVSSIE 555
Score = 242 (90.2 bits), Expect = 6.3e-40, Sum P(4) = 6.3e-40
Identities = 53/113 (46%), Positives = 71/113 (62%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LPI +I A++ N VII GETG GKTTQ+P+ E G G + G IG TQP
Sbjct: 99 LPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVD------GLIGHTQP 152
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
RR+A A R+A ELG LG++VG++VR + ++ + IK MTDGILL E++
Sbjct: 153 RRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQ 205
Score = 84 (34.6 bits), Expect = 6.3e-40, Sum P(4) = 6.3e-40
Identities = 33/104 (31%), Positives = 51/104 (49%)
Query: 171 LKLILMSATLRVEDFIS--GGRLFRNPPIIEVPTRQFPVTVHFSKRTE--IVDYIGQAYK 226
LKLI+ SAT+ + F + PIIEV R FPV + + + ++D Q+ +
Sbjct: 245 LKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQ 304
Query: 227 KV------MSIHKRLPQ---GGILVFVTGQREVEYLCSKLRKAS 261
+V +S L G ILVF+ G+RE+ + L KA+
Sbjct: 305 EVDIISGILSAVDELSDCGNGDILVFLNGEREIRDTAAALVKAN 348
Score = 41 (19.5 bits), Expect = 2.4e-19, Sum P(4) = 2.4e-19
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 125 KKIGDSCSIKFMTDGILLRELKALYEKQQQLLRSGQCIEPKDRVFP 170
K++G + + + +K + QQ +LRS Q + K R P
Sbjct: 46 KEVGQKSPTELAMLSLSEKHIKLVEPLQQHILRSIQDKQQKIRSLP 91
Score = 38 (18.4 bits), Expect = 6.3e-40, Sum P(4) = 6.3e-40
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 692 KLGKRKLKEVAKLSHAKFSNPTSDVL-TVAY 721
K KR+ +++ S A N +SD L T+ Y
Sbjct: 888 KKAKRENEQLLDFSKAFLLNESSDELSTIEY 918
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 333 (122.3 bits), Expect = 4.0e-39, Sum P(3) = 4.0e-39
Identities = 80/204 (39%), Positives = 111/204 (54%)
Query: 424 EKMGDN-KRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPG 480
E + D +R G + L VLP+YA LP+ Q R+F+ G R VVV+TN+AETSLTI G
Sbjct: 145 EMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEG 204
Query: 481 IKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNN 540
I YV+D G K K YN G+ES + SK C+RLY++ + +
Sbjct: 205 IIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQH 264
Query: 541 ILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSN 600
L + + EI + + VVLL+KS+ I + +F F PP L+ A L AL AL+
Sbjct: 265 ELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHL 324
Query: 601 GRLTALGKAMAHYPMSPRHSRMLL 624
G LT G+ MA P+ P S+M+L
Sbjct: 325 GELTTSGRKMAELPVDPMLSKMIL 348
Score = 158 (60.7 bits), Expect = 4.0e-39, Sum P(3) = 4.0e-39
Identities = 34/94 (36%), Positives = 53/94 (56%)
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMS 230
LK+++ SAT+ F + F + P+ +P R+FPV + ++K E DY+ V+
Sbjct: 65 LKVLVASATMDTARFST---FFDDAPVFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQ 120
Query: 231 IHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
IH P G ILVF+TGQ E+E C L+ ++L
Sbjct: 121 IHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Score = 37 (18.1 bits), Expect = 4.0e-39, Sum P(3) = 4.0e-39
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 705 SHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+ F P D L + + S ++C E + ++M +R+QL LL
Sbjct: 386 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLL 441
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 333 (122.3 bits), Expect = 5.1e-39, Sum P(3) = 5.1e-39
Identities = 80/204 (39%), Positives = 111/204 (54%)
Query: 424 EKMGDN-KRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPG 480
E + D +R G + L VLP+YA LP+ Q R+F+ G R VVV+TN+AETSLTI G
Sbjct: 145 EMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEG 204
Query: 481 IKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNN 540
I YV+D G K K YN G+ES + SK C+RLY++ + +
Sbjct: 205 IIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQH 264
Query: 541 ILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSN 600
L + + EI + + VVLL+KS+ I + +F F PP L+ A L AL AL+
Sbjct: 265 ELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHL 324
Query: 601 GRLTALGKAMAHYPMSPRHSRMLL 624
G LT G+ MA P+ P S+M+L
Sbjct: 325 GELTTSGRKMAELPVDPMLSKMIL 348
Score = 157 (60.3 bits), Expect = 5.1e-39, Sum P(3) = 5.1e-39
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMS 230
LK+++ SAT+ F + F P+ +P R+FPV + ++K E DY+ V+
Sbjct: 65 LKVLVASATMDTARFST---FFDGAPVFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQ 120
Query: 231 IHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
IH P G ILVF+TGQ E+E C L+ ++L
Sbjct: 121 IHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRL 154
Score = 37 (18.1 bits), Expect = 5.1e-39, Sum P(3) = 5.1e-39
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 705 SHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+ F P D L + + S ++C E + ++M +R+QL LL
Sbjct: 386 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLL 441
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 305 (112.4 bits), Expect = 1.2e-38, Sum P(4) = 1.2e-38
Identities = 68/202 (33%), Positives = 107/202 (52%)
Query: 423 VEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIK 482
+E+ + V + LPL+ L AQ F +K R VV++TN+AETS+T+PG++
Sbjct: 399 IEEYAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVR 458
Query: 483 YVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNIL 542
YV+DTG+ K+K+Y ++ G+ES + ISK CYRLY+ V+ +
Sbjct: 459 YVIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYKE-M 517
Query: 543 PDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGR 602
D EI + V L+M + +D + FP P+++ + +A L L A+D G
Sbjct: 518 RDADLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGA 577
Query: 603 LTALGKAMAHYPMSPRHSRMLL 624
+T LGK MA P++ R+LL
Sbjct: 578 ITELGKKMARLPVAAPLGRVLL 599
Score = 140 (54.3 bits), Expect = 1.2e-38, Sum P(4) = 1.2e-38
Identities = 41/95 (43%), Positives = 49/95 (51%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGF----------GSNR 80
RK LPI + I E + N +I+ GETG GK+TQVPQFL + + + R
Sbjct: 114 RKALPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFLADEEWCRPRQVIMTLPNGR 173
Query: 81 CSSRS--GRIGVTQPRRVAVLATAKRVAFELGLHL 113
R G I VTQPRRVA A RVA E G L
Sbjct: 174 KEQRKVGGMIAVTQPRRVAATTLAHRVAREAGTPL 208
Score = 110 (43.8 bits), Expect = 1.5e-35, Sum P(4) = 1.5e-35
Identities = 32/73 (43%), Positives = 39/73 (53%)
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHL------GKE-------VGFQVRHDKKIGDSCS 132
G I VTQPRRVA A RVA E G L G + VG+ VR D +
Sbjct: 181 GMIAVTQPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKGTK 240
Query: 133 IKFMTDGILLREL 145
IKF+T+G+LL+EL
Sbjct: 241 IKFLTEGMLLQEL 253
Score = 79 (32.9 bits), Expect = 1.2e-38, Sum P(4) = 1.2e-38
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 170 PLKLILMSATLRVE---DFISGGRLFRNPPI---------IEVPTRQFPVTV-HFSKRTE 216
PLK++ MSAT +E +F S + R +++ RQFPV + H K
Sbjct: 300 PLKVVAMSATANIETLENFFSIPQDDRKAKAESDGKAEQTLKIEGRQFPVEIIHSPKPVP 359
Query: 217 IVDYIGQAYKKVMSIH--KRLPQGGILVFVTGQREVE 251
++ + K V IH + LP G ILVF+ GQ +E
Sbjct: 360 VL--ADEVVKTVFKIHCGEPLP-GDILVFLYGQEPIE 393
Score = 57 (25.1 bits), Expect = 1.2e-38, Sum P(4) = 1.2e-38
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 715 DVLTVAYALQCFELSKSP-VEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
D++ +Q + S E+C + ++L+TM + +R+QL L ++
Sbjct: 651 DLMVYLTTMQMYTAENSDRTEWCKKRKINLRTMRQALNIRRQLRSLCVSE 700
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 255 (94.8 bits), Expect = 1.9e-38, Sum P(4) = 1.9e-38
Identities = 73/232 (31%), Positives = 111/232 (47%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LP + I+E + N ++I G TGCGKTTQ+PQF+ + + R R
Sbjct: 575 MQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGR-PDRVA 633
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
I TQPRR++ +A A RVA E LG G+Q+R + + F T G+LLR L+
Sbjct: 634 NIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLE 693
Query: 147 A----------LYEKQQQLLRSGQ--CIEPKDRVFP---LKLILMSATLRVEDFISGGRL 191
+ ++ + + KD + LK+I+MSATL E F +
Sbjct: 694 GDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELF---SQY 750
Query: 192 FRNPPIIEVPTRQFPVTVHFSK----RTEIVDYIGQAYKKVMSIHKRLPQGG 239
F N P I +P R FPV F + +T V G Y++ +++ GG
Sbjct: 751 FNNCPCIHIPGRTFPVEQFFLEDAIAKTRYVIEDGSPYRRSTKLNRSSGPGG 802
Score = 238 (88.8 bits), Expect = 1.9e-38, Sum P(4) = 1.9e-38
Identities = 63/206 (30%), Positives = 107/206 (51%)
Query: 425 KMGDNKRAGVGALCVL-PLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKY 483
+M +N+R CV+ PL++ L Q VF + G +++STN+AETS+TI + Y
Sbjct: 914 RMFNNRRTN---RCVVYPLHSSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVY 970
Query: 484 VVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILP 543
V+D+GR K K+Y+++ +ES E W+S+ C+ L++S F + L
Sbjct: 971 VIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLS 1030
Query: 544 DFSCAEISKVPVDGVVLLMKSMNI--DKVSNFPFPT---PPEVTALVEAERCLKALEALD 598
EI +VP++ + L +K + + ++ + F PP +L A++ L AL AL
Sbjct: 1031 QQQLPEIQRVPLEQLCLRVKVLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALT 1090
Query: 599 SNGRLTALGKAMAHYPMSPRHSRMLL 624
LT LG +A P+ R +++L
Sbjct: 1091 DEESLTPLGWHLACLPVDVRIGKLML 1116
Score = 56 (24.8 bits), Expect = 1.9e-38, Sum P(4) = 1.9e-38
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 699 KEVAKLSHAKFSNPTSDVLTV--AYALQCFELS---KSPVEFCNEYALHLKTMEEMSKLR 753
+E A FS SD L + AY C K+ ++C E L ++ ++E++ L+
Sbjct: 1147 REEANEKKLAFSLANSDHLALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLK 1206
Query: 754 KQLLHLL 760
+Q LL
Sbjct: 1207 RQFAELL 1213
Score = 50 (22.7 bits), Expect = 1.9e-38, Sum P(4) = 1.9e-38
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 236 PQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENK 273
P G +LVF+ G E++ L +L+ S ++ N+ + N+
Sbjct: 889 PPGAVLVFLPGLAEIKQLYEQLQ--SNRMF-NNRRTNR 923
Score = 44 (20.5 bits), Expect = 3.3e-37, Sum P(4) = 3.3e-37
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 688 CRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSK 730
CR+ L R L+E+A L +F+ SD+ V L+ + K
Sbjct: 1189 CRENFLSIRGLQEIACLKR-QFAELLSDIGFVKDGLKARVIEK 1230
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 269 (99.8 bits), Expect = 3.0e-38, Sum P(3) = 3.0e-38
Identities = 59/167 (35%), Positives = 87/167 (52%)
Query: 451 QLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWIS 510
Q R+F G R V+STN++ TSLTI GI+YVVD G K +N G++ E+ IS
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 511 KXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKV 570
K C+R+YS +N +PD EI + + VVL +K + I V
Sbjct: 339 KSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDV 398
Query: 571 SNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSP 617
FP+ PP ++EA + L +A+D +G +T LG +M +P+ P
Sbjct: 399 IRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPP 445
Score = 147 (56.8 bits), Expect = 3.0e-38, Sum P(3) = 3.0e-38
Identities = 30/58 (51%), Positives = 41/58 (70%)
Query: 88 IGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
IGVTQPR+VA ++ A+RVA E+ LG +VG+QVR D +IK+MTDG LL+ +
Sbjct: 2 IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHI 59
Score = 122 (48.0 bits), Expect = 3.0e-38, Sum P(3) = 3.0e-38
Identities = 34/92 (36%), Positives = 46/92 (50%)
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFS-----KRTEIVDYIGQAY 225
LK+++MSAT+ + + F N PI ++P R +PV F + E YI
Sbjct: 105 LKVVVMSATMELAKLSA---FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 161
Query: 226 KKVMSIHKRLPQGGILVFVTGQREVEYLCSKL 257
K M IH G ILVF+TGQ E+E C L
Sbjct: 162 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 193
Score = 49 (22.3 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 528 HCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSN-FPFPTPPEVTALVE 586
H RL S V + P +CA I +D LL+ + V N F P PE E
Sbjct: 430 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK--E 487
Query: 587 AERCLKALEA 596
AE+ + L A
Sbjct: 488 AEQRHRELAA 497
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 258 (95.9 bits), Expect = 4.3e-38, Sum P(4) = 4.3e-38
Identities = 77/226 (34%), Positives = 120/226 (53%)
Query: 25 NEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN-RCSS 83
+E ++ R+ LP+ ++EI++ + +N V+I GETG GKTTQ+PQFL + F + C
Sbjct: 183 SEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPC-- 240
Query: 84 RSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLR 143
RI TQPRR+A +A A+RVA E +G+ +G+Q+R + ++ + F T+G+LLR
Sbjct: 241 ---RIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLR 297
Query: 144 ELKA-----------LYEKQQQLLRSGQCIEPKDRVF----P-LKLILMSATLRVEDFIS 187
L A + ++ + R + K R P LKLIL SA L V FI
Sbjct: 298 TLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFI- 356
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK 233
R F + P+I + R F V F + +I+ G K+++ K
Sbjct: 357 --RYFGSCPVIYIQGRPFEVKEMFLE--DILRTTGYTNKEMLKYKK 398
Score = 234 (87.4 bits), Expect = 4.3e-38, Sum P(4) = 4.3e-38
Identities = 55/194 (28%), Positives = 104/194 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V L++ + + Q +V ++ G R +++STN+AETS+T+ + +V+D+G+ K K +++
Sbjct: 657 VFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDAL 716
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + ++ WISK C+RL+S F N+L +F E+ ++P+ +
Sbjct: 717 NFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNML-EFQTPELLRMPLQEL 775
Query: 559 VL---LMKSMNIDKVSNFPF--PTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
L L+ +N +++F P PP + A + LK ++A+D+ LT LG +A
Sbjct: 776 CLHTKLLAPVNCP-IADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADL 834
Query: 614 PMSPRHSRMLLTLI 627
P+ P +M+L +
Sbjct: 835 PVEPHLGKMVLCAV 848
Score = 57 (25.1 bits), Expect = 4.3e-38, Sum P(4) = 4.3e-38
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 699 KEVAKLSHAKFSNPT-SDVLTVAYALQCFELSKSPV---EFCNEYALHLKTMEEMSKLRK 754
K A L +F+ T SD + + A Q ++ ++S FC + L TME + +R
Sbjct: 878 KRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRT 937
Query: 755 QLL 757
QLL
Sbjct: 938 QLL 940
Score = 41 (19.5 bits), Expect = 5.0e-16, Sum P(3) = 5.0e-16
Identities = 20/94 (21%), Positives = 36/94 (38%)
Query: 177 SATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLP 236
SA+L + + N + R+ H S E VD + + +I
Sbjct: 562 SASLEFGNLDESSLVHTNGSDLSAEDRELLKAYHHSFDDEKVD-LDLIMHLLYNICHGCD 620
Query: 237 QGGILVFVTGQREVEYLCSKLRKASKQLLVNSSK 270
G IL+F+ G E+ L ++ K+ N+ +
Sbjct: 621 AGAILIFLPGYDEIVGLRDRILFDDKRFADNTHR 654
Score = 38 (18.4 bits), Expect = 4.3e-38, Sum P(4) = 4.3e-38
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 303 YSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEIL 342
+ E Q R +++D+ D+ DA+ TE + L
Sbjct: 421 FKPESQRQRTVPNVTEEYDLLDDGGDAVFSQLTEKDVNCL 460
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 246 (91.7 bits), Expect = 6.5e-38, Sum P(3) = 6.5e-38
Identities = 55/182 (30%), Positives = 93/182 (51%)
Query: 445 MLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESY 504
M + +VF+ G R +V++TN+AETS+TI + YV+D G+ K +++ N I +
Sbjct: 513 MFKSGTMSQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTM 572
Query: 505 EIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKS 564
+W+SK HCY LY+ + ++L D+ EI + P++ + L +K
Sbjct: 573 SAEWVSKANAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEELCLQIKI 631
Query: 565 MNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRM 622
+ + ++ F PP A++ + R L L ALD LT LG +A P+ P +M
Sbjct: 632 LRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKM 691
Query: 623 LL 624
+L
Sbjct: 692 IL 693
Score = 232 (86.7 bits), Expect = 6.5e-38, Sum P(3) = 6.5e-38
Identities = 78/235 (33%), Positives = 123/235 (52%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E+++ R+ LP M++E++ ++++ +I GETGCGKTTQV QF+ + R +
Sbjct: 199 EMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYI--ERGKGSA 256
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGK--EVGFQVRHDKKIG-DSCSIKFMTDGILL 142
RI TQPRR++ ++ A+RVA E G G+Q+R ++ SI + T GI+L
Sbjct: 257 CRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 316
Query: 143 RELKA-----------LYEKQQQLLRSGQCIEP-KDRV-F--PLKLILMSATLRVEDFIS 187
+ L++ L E ++ L+S + KD + F LK+ILMSATL E F
Sbjct: 317 QWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKF-- 374
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRT-EIVDYIGQAYKKVMSIHKR-LPQGGI 240
F N P+I +P FPV + + E + Y+ + K+ S KR QG +
Sbjct: 375 -SEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQ-KEHRSQFKRGFMQGHV 427
Score = 65 (27.9 bits), Expect = 6.5e-38, Sum P(3) = 6.5e-38
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKS-----PVE 734
+L +DP LGK K+ + + AK + SD LTV A + +E ++ +
Sbjct: 710 SLSFKDPFVIP--LGKEKIADARRKELAK--DTRSDHLTVVNAFEGWEEARRRGFRYEKD 765
Query: 735 FCNEYALHLKTMEEMSKLRKQLL-HLL 760
+C EY L T++ + ++ Q HLL
Sbjct: 766 YCWEYFLSSNTLQMLHNMKGQFAEHLL 792
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 262 (97.3 bits), Expect = 1.1e-37, Sum P(4) = 1.1e-37
Identities = 61/188 (32%), Positives = 99/188 (52%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPL++ L + Q +VF G+R ++VSTN+AETS+TI + YV+D+ + K + Y S
Sbjct: 693 ILPLHSQLTSQEQRKVFNHYP-GKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSN 751
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + + W SK + + L S F L D AE+ ++P+ +
Sbjct: 752 NNMVHFATVWASKTNVIQRRGRAGRVRAGYAFHLCSKMRFE-ALDDHGTAEMLRIPLHQI 810
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + V F PP +VE+E L+A+ ALD N LT+LGK +A P+
Sbjct: 811 ALTIKLLRLGSVGEFLGKALQPPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIE 870
Query: 617 PRHSRMLL 624
P +++L+
Sbjct: 871 PVIAKVLI 878
Score = 206 (77.6 bits), Expect = 1.1e-37, Sum P(4) = 1.1e-37
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 25 NEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSR 84
+++ R +LP+ + I++ V +N +I GETGCGK+TQV QFL E+ F N +
Sbjct: 372 DKITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLES-FLENSNGAS 430
Query: 85 SGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSC-SIKFMTDGILLR 143
+ V+QPRR++ ++ A+RVA E G +G+ G+ VR D SI F T G+LLR
Sbjct: 431 FNAV-VSQPRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLR 489
Query: 144 ELK 146
++
Sbjct: 490 MME 492
Score = 69 (29.3 bits), Expect = 1.1e-37, Sum P(4) = 1.1e-37
Identities = 22/87 (25%), Positives = 38/87 (43%)
Query: 679 NALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVE--FC 736
+A+ P +EK R K + KFS+ + V + + ++ S E FC
Sbjct: 894 SAMSFPTPFVPREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYREAVQMGASAAEREFC 953
Query: 737 NEYALHLKTMEEMSKLRKQLLHLLFNQ 763
Y+L ++ R+QL+ +L NQ
Sbjct: 954 ERYSLSNPVLKMTDGARRQLIDVLRNQ 980
Score = 52 (23.4 bits), Expect = 1.1e-37, Sum P(4) = 1.1e-37
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 193 RNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEY 252
RN I+ P+ + S+ +E G + I R G +LVF+ G E+
Sbjct: 615 RNMNILTDPSINESLKTAMSRISEKDIPFGVIEAILNDIASRGVDGAVLVFLPGWAEIMT 674
Query: 253 LCSKL 257
LC++L
Sbjct: 675 LCNRL 679
Score = 45 (20.9 bits), Expect = 4.0e-15, Sum P(4) = 4.0e-15
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 550 ISKVPVDGVVLLMKSMNIDKVSNFPFPTP 578
I+KV + G L S+ D S FPTP
Sbjct: 873 IAKVLILGTALGAGSVMCDVASAMSFPTP 901
Score = 38 (18.4 bits), Expect = 1.0e-13, Sum P(4) = 1.0e-13
Identities = 5/28 (17%), Positives = 16/28 (57%)
Query: 197 IIEVPTRQFPVTVHFSKRTEIVDYIGQA 224
++ +P Q +T+ + + +++G+A
Sbjct: 802 MLRIPLHQIALTIKLLRLGSVGEFLGKA 829
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 259 (96.2 bits), Expect = 1.2e-37, Sum P(4) = 1.2e-37
Identities = 80/233 (34%), Positives = 123/233 (52%)
Query: 19 VHVSR-PNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFG 77
V V R +E ++ R+ LP+ ++EI++ + +N V+I GETG GKTTQ+PQFL + F
Sbjct: 192 VPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFK 251
Query: 78 SN-RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFM 136
+ C RI TQPRR+A +A A+RVA E +G+ +G+Q+R + ++ + F
Sbjct: 252 NGIPC-----RIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFC 306
Query: 137 TDGILLRELKA-----------LYEKQQQLLRSGQCIEPKDRVF----P-LKLILMSATL 180
T+G+LLR L A + ++ + R + K R P LKLIL SA L
Sbjct: 307 TNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAAL 366
Query: 181 RVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK 233
V FI R F + P+I + R F V F + +I+ G K+++ K
Sbjct: 367 DVNLFI---RYFGSCPVIYIQGRPFEVKEMFLE--DILRTTGYTNKEMLKYKK 414
Score = 234 (87.4 bits), Expect = 1.2e-37, Sum P(4) = 1.2e-37
Identities = 55/194 (28%), Positives = 104/194 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V L++ + + Q +V ++ G R +++STN+AETS+T+ + +V+D+G+ K K +++
Sbjct: 673 VFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDAL 732
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + ++ WISK C+RL+S F N+L +F E+ ++P+ +
Sbjct: 733 NFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNML-EFQTPELLRMPLQEL 791
Query: 559 VL---LMKSMNIDKVSNFPF--PTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
L L+ +N +++F P PP + A + LK ++A+D+ LT LG +A
Sbjct: 792 CLHTKLLAPVNCT-IADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADL 850
Query: 614 PMSPRHSRMLLTLI 627
P+ P +M+L +
Sbjct: 851 PVEPHLGKMVLCAV 864
Score = 57 (25.1 bits), Expect = 1.2e-37, Sum P(4) = 1.2e-37
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 699 KEVAKLSHAKFSNPT-SDVLTVAYALQCFELSKSPV---EFCNEYALHLKTMEEMSKLRK 754
K A L +F+ T SD + + A Q ++ ++S FC + L TME + +R
Sbjct: 894 KRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRT 953
Query: 755 QLL 757
QLL
Sbjct: 954 QLL 956
Score = 47 (21.6 bits), Expect = 1.3e-36, Sum P(4) = 1.3e-36
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 657 PFVLQLEGTQTNSNDSELEERDNA 680
P + +G +S+DSE+E+R A
Sbjct: 1092 PSSFRADGIPNDSSDSEMEDRTTA 1115
Score = 46 (21.3 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 486 DTGREKVKKYNSANGIESYEIQWISK 511
+ GREK + + SA ++++WI K
Sbjct: 1366 EIGREKSQDWGSAGLGGVFKVEWIRK 1391
Score = 41 (19.5 bits), Expect = 1.2e-37, Sum P(4) = 1.2e-37
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 303 YSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEIL 342
+ E Q R + +++D+ D+ DA+ TE + L
Sbjct: 437 FKPESQRQRAVASVSEEYDLLDDGGDAVFSQLTEKDVNCL 476
Score = 39 (18.8 bits), Expect = 1.0e-17, Sum P(4) = 1.0e-17
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 666 QTNSNDSELEERD 678
QTN ND E+R+
Sbjct: 593 QTNGNDLSAEDRE 605
Score = 39 (18.8 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 20/94 (21%), Positives = 36/94 (38%)
Query: 177 SATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLP 236
SA+L + + N + R+ H S E VD + + +I
Sbjct: 578 SASLEFGNLDESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVD-LDLIMHLLYNICHSCD 636
Query: 237 QGGILVFVTGQREVEYLCSKLRKASKQLLVNSSK 270
G IL+F+ G E+ L ++ K+ N+ +
Sbjct: 637 AGAILIFLPGYDEIVGLRDRILFDDKRFADNTHR 670
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 258 (95.9 bits), Expect = 1.9e-37, Sum P(4) = 1.9e-37
Identities = 77/226 (34%), Positives = 120/226 (53%)
Query: 25 NEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN-RCSS 83
+E ++ R+ LP+ ++EI++ + +N V+I GETG GKTTQ+PQFL + F + C
Sbjct: 183 SEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPC-- 240
Query: 84 RSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLR 143
RI TQPRR+A +A A+RVA E +G+ +G+Q+R + ++ + F T+G+LLR
Sbjct: 241 ---RIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLR 297
Query: 144 ELKA-----------LYEKQQQLLRSGQCIEPKDRVF----P-LKLILMSATLRVEDFIS 187
L A + ++ + R + K R P LKLIL SA L V FI
Sbjct: 298 TLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFI- 356
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK 233
R F + P+I + R F V F + +I+ G K+++ K
Sbjct: 357 --RYFGSCPVIYIQGRPFEVKEMFLE--DILRTTGYTNKEMLKYKK 398
Score = 236 (88.1 bits), Expect = 1.9e-37, Sum P(4) = 1.9e-37
Identities = 59/207 (28%), Positives = 109/207 (52%)
Query: 428 DNKRAGVGA--LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVV 485
D+KR A V L++ + + Q +V ++ G R +++STN+AETS+T+ + +V+
Sbjct: 644 DDKRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVI 703
Query: 486 DTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDF 545
D+G+ K K +++ N + ++ WISK C+RL+S F N+L +F
Sbjct: 704 DSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNML-EF 762
Query: 546 SCAEISKVPVDGVVL---LMKSMNIDKVSNFPF--PTPPEVTALVEAERCLKALEALDSN 600
E+ ++P+ + L L+ +N +++F P PP + A + LK ++A+D+
Sbjct: 763 QTPELLRMPLQELCLHTKLLAPVNC-AIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAW 821
Query: 601 GRLTALGKAMAHYPMSPRHSRMLLTLI 627
LT LG +A P+ P +M+L +
Sbjct: 822 EDLTELGYHLADLPVEPHLGKMVLCAV 848
Score = 57 (25.1 bits), Expect = 1.9e-37, Sum P(4) = 1.9e-37
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 699 KEVAKLSHAKFSNPT-SDVLTVAYALQCFELSKSPV---EFCNEYALHLKTMEEMSKLRK 754
K A L +F+ T SD + + A Q ++ ++S FC + L TME + +R
Sbjct: 878 KRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRT 937
Query: 755 QLL 757
QLL
Sbjct: 938 QLL 940
Score = 47 (21.6 bits), Expect = 2.1e-36, Sum P(4) = 2.1e-36
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 657 PFVLQLEGTQTNSNDSELEERDNA 680
P + +G +S+DSE+E+R A
Sbjct: 1076 PSSFRADGIPNDSSDSEMEDRTTA 1099
Score = 46 (21.3 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 486 DTGREKVKKYNSANGIESYEIQWISK 511
+ GREK + + SA ++++WI K
Sbjct: 1350 EIGREKSQDWGSAGLGGVFKVEWIRK 1375
Score = 38 (18.4 bits), Expect = 1.9e-37, Sum P(4) = 1.9e-37
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 238 GGILVFVTGQREVEYLCSKLRKASKQLLVNSSK 270
G IL+F+ G E+ L ++ K+ N+ +
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKRFAENAHR 654
Score = 38 (18.4 bits), Expect = 1.9e-37, Sum P(4) = 1.9e-37
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 303 YSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEIL 342
+ E Q R +++D+ D+ DA+ TE + L
Sbjct: 421 FKPESQRQRAIPNVTEEYDLLDDGGDAVFSQLTEKDVNCL 460
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 260 (96.6 bits), Expect = 2.4e-37, Sum P(4) = 2.4e-37
Identities = 78/230 (33%), Positives = 121/230 (52%)
Query: 25 NEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN-RCSS 83
+E ++ R+ LP+ ++EI++ + +N V+I GETG GKTTQ+PQFL + F + C
Sbjct: 184 SEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPC-- 241
Query: 84 RSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLR 143
RI TQPRR+A +A A+RVA E +G+ +G+Q+R + ++ + F T+G+LLR
Sbjct: 242 ---RIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLR 298
Query: 144 ELKA-----------LYEKQQQLLRSGQCIEPKDRVF----P-LKLILMSATLRVEDFIS 187
L A + ++ + R + K R P LKLIL SA L V FI
Sbjct: 299 TLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFI- 357
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQ 237
R F + P+I + R F V F + +I+ G K+++ K Q
Sbjct: 358 --RYFGSCPVIYIQGRPFEVKEMFLE--DILRTTGYTNKEMLKYKKEKQQ 403
Score = 234 (87.4 bits), Expect = 2.4e-37, Sum P(4) = 2.4e-37
Identities = 55/194 (28%), Positives = 104/194 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V L++ + + Q +V ++ G R +++STN+AETS+T+ + +V+D+G+ K K +++
Sbjct: 658 VFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDAL 717
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + ++ WISK C+RL+S F N+L +F E+ ++P+ +
Sbjct: 718 NFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNML-EFQTPELLRMPLQEL 776
Query: 559 VL---LMKSMNIDKVSNFPF--PTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
L L+ +N +++F P PP + A + LK ++A+D+ LT LG +A
Sbjct: 777 CLHTKLLAPVNCP-IADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADL 835
Query: 614 PMSPRHSRMLLTLI 627
P+ P +M+L +
Sbjct: 836 PVEPHLGKMVLCAV 849
Score = 53 (23.7 bits), Expect = 2.4e-37, Sum P(4) = 2.4e-37
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 699 KEVAKLSHAKFS-NPTSDVLTVAYALQCFELSKSPV---EFCNEYALHLKTMEEMSKLRK 754
K A L +F+ SD + + A Q ++ ++S FC + L TME + +R
Sbjct: 879 KRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRT 938
Query: 755 QLL 757
QLL
Sbjct: 939 QLL 941
Score = 46 (21.3 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 657 PFVLQLEGTQTNSNDSELEERDNA 680
P +++G +S+DSE+E++ A
Sbjct: 1077 PSSFRVDGIPNDSSDSEMEDKTTA 1100
Score = 46 (21.3 bits), Expect = 4.2e-17, Sum P(3) = 4.2e-17
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 486 DTGREKVKKYNSANGIESYEIQWISK 511
+ GREK + + SA ++++WI K
Sbjct: 1351 EIGREKSQDWGSAGLGGVFKVEWIRK 1376
Score = 41 (19.5 bits), Expect = 2.4e-37, Sum P(4) = 2.4e-37
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 303 YSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEIL 342
+ E Q R D++D+ D+ DA+ TE + L
Sbjct: 422 FKPESQRQRTVLNVTDEYDLLDDGGDAVFSQLTEKDVNCL 461
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 238 (88.8 bits), Expect = 3.9e-37, Sum P(3) = 3.9e-37
Identities = 53/174 (30%), Positives = 90/174 (51%)
Query: 453 RVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKX 512
+VF+ G R +V++TN+AETS+TI + YV+D G+ K +++ N I + +W+SK
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 574
Query: 513 XXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSN 572
HCY LY+ + ++L D+ EI + P++ + L +K + + ++
Sbjct: 575 NAKQRKGRAGRVQPGHCYHLYNG-LRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAY 633
Query: 573 F--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
F PP A+ + + L L ALD LT LG +A P+ P +M+L
Sbjct: 634 FLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMIL 687
Score = 233 (87.1 bits), Expect = 3.9e-37, Sum P(3) = 3.9e-37
Identities = 75/234 (32%), Positives = 122/234 (52%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E+++ R+ LP M++E++ ++++ +I GETGCGKTTQV QF+ + R +
Sbjct: 193 EMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDDYI--ERGKGSA 250
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGK--EVGFQVRHDKKIG-DSCSIKFMTDGILL 142
RI TQPRR++ ++ A+RVA E G G+Q+R ++ SI + T GI+L
Sbjct: 251 CRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 310
Query: 143 RELKA-----------LYEKQQQLLRSGQCIEP-KDRV-F-P-LKLILMSATLRVEDFIS 187
+ L++ L E ++ L+S + KD + F P LK+ILMSATL E F
Sbjct: 311 QWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKF-- 368
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRT-EIVDYIGQAYKKVMSIHKRLPQGGI 240
F N P+I +P FPV + + E + Y+ + ++ + QG +
Sbjct: 369 -SEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEQRSQFKRGFMQGHV 421
Score = 65 (27.9 bits), Expect = 3.9e-37, Sum P(3) = 3.9e-37
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 680 ALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKS-----PVE 734
+L +DP LGK K+ + + AK + SD LTV A + +E ++ +
Sbjct: 704 SLSFKDPFVIP--LGKEKIADARRKELAK--DTKSDHLTVVNAFEGWEEARRRGFRYEKD 759
Query: 735 FCNEYALHLKTMEEMSKLRKQLL-HLL 760
+C EY L T++ + ++ Q HLL
Sbjct: 760 YCWEYFLSSNTLQMLHNMKGQFAEHLL 786
Score = 54 (24.1 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 16/79 (20%), Positives = 36/79 (45%)
Query: 274 GNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSDS 333
G ++ A+++PN+ K + +E + Q T + D++ D + + +NE D D
Sbjct: 120 GTEIPAENKPNSEKKLENQE--KKLISQEKRTFRIRDKYIDRDSEYL-LQENEPDVALDQ 176
Query: 334 ETESETEILGEDEKLVEQK 352
+ + D + +E +
Sbjct: 177 QLLEDLRKKKSDLRYIEMQ 195
Score = 37 (18.1 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 380 LSGKNASGPSSQMKLSTPAIPEQCTELPPTPTPEQCPELSSPDVEKMGDNKR 431
+ KN +Q+ P TE+P P +L + + + + KR
Sbjct: 97 VQAKNDKDSEAQISWFAPEDHGYGTEIPAENKPNSEKKLENQEKKLISQEKR 148
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 256 (95.2 bits), Expect = 5.6e-37, Sum P(4) = 5.6e-37
Identities = 72/214 (33%), Positives = 112/214 (52%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
RK LP ++ +++A+ N +++ GETGCGKTTQ+PQ++ E+ S R + + I
Sbjct: 257 RKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCN--IIC 314
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA--- 147
TQPRR++ +A ++RV+ E G LG+ VGF+VR + G + + F T GILLR L +
Sbjct: 315 TQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRN 374
Query: 148 --------LYEKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFISGGRLFRNP 195
+ E ++ + I + P L+L+LMSATL E F +
Sbjct: 375 LNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELF---SNYYGGA 431
Query: 196 PIIEVPTRQFPVTVHFSKRT-EIVDYIGQAYKKV 228
P I +P PV HF + EI Y ++ +V
Sbjct: 432 PTIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQV 465
Score = 225 (84.3 bits), Expect = 5.6e-37, Sum P(4) = 5.6e-37
Identities = 53/188 (28%), Positives = 91/188 (48%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+L + + A Q +FE R +V++TN+AE S+TI + +VVD G+ K Y++
Sbjct: 573 LLMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDAL 632
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N WIS+ CY LY V++ ++ E+ + P++ +
Sbjct: 633 NNTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYD-AFAEYQLPELLRTPLNSL 691
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +KS+ ++ ++ F PE A+ A LK + ALD LT LGK ++ P+
Sbjct: 692 CLQIKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVD 751
Query: 617 PRHSRMLL 624
P+ +ML+
Sbjct: 752 PKLGKMLI 759
Score = 56 (24.8 bits), Expect = 5.6e-37, Sum P(4) = 5.6e-37
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 699 KEVAKLSHAKFS-NPTSDVLTVAYALQCF---ELSKSPVEFCNEYALHLKTMEEMSKLRK 754
K++A + +FS SD + + A + + E S EFC L +T++ + LRK
Sbjct: 790 KDLALSAKLRFSAKDYSDHMALVRAFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRK 849
Query: 755 QLLHLL 760
Q ++L
Sbjct: 850 QFNYIL 855
Score = 55 (24.4 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 233 KRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMK 292
KR PQ +++ ++ QR VE L + S+QL SS K N+ VADS+P +
Sbjct: 162 KR-PQREVVLPLSLQRRVEGLLQE-HLDSQQL---SS--GKANECVADSQPPKQTEELPD 214
Query: 293 EINEAFEIQGYSTEQQTDRFS 313
E +++F + G E+ R S
Sbjct: 215 ENSDSF-LDGSVMEKVLQRRS 234
Score = 43 (20.2 bits), Expect = 5.6e-37, Sum P(4) = 5.6e-37
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 233 KRLPQGGILVFVTGQREVEYLCSKLR 258
K P G +LVF+TG ++ L +++
Sbjct: 536 KERP-GAVLVFLTGWDDIRSLSDQIK 560
Score = 38 (18.4 bits), Expect = 7.0e-18, Sum P(4) = 7.0e-18
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 402 QCTELPPTPTPEQCPELSSPDVEKMGDNKRAGVGA 436
Q EL TP C ++ S VE + + A + A
Sbjct: 679 QLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQA 713
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 236 (88.1 bits), Expect = 6.4e-37, Sum P(4) = 6.4e-37
Identities = 59/193 (30%), Positives = 102/193 (52%)
Query: 438 CVL-PLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
CV+ PL++ L + Q VF G +++STN+AETS+TI + YV+D+G+ K K+Y+
Sbjct: 881 CVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYD 940
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
++ G+ES E ++S+ C+ L++S +N+ L EI +VP++
Sbjct: 941 ASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLE 1000
Query: 557 GVVLLMKSMNIDKVSNFP--FPT---PPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
+ L +K + + N F PP +L ++ L+ L AL + RLT LG +A
Sbjct: 1001 QLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLA 1060
Query: 612 HYPMSPRHSRMLL 624
P+ R +++L
Sbjct: 1061 SLPVDVRIGKLML 1073
Score = 226 (84.6 bits), Expect = 6.4e-37, Sum P(4) = 6.4e-37
Identities = 72/218 (33%), Positives = 108/218 (49%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP + I+ + + V+I G TGCGKTTQ+PQF+ + N + I
Sbjct: 541 RQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSL--NGPPEKVANIIC 598
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK---A 147
TQPRR++ ++ A+RVA E +G VG+Q+R + + + + T G+LLR L+ A
Sbjct: 599 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTA 658
Query: 148 LY--------EKQQQLLRSG-QCIEPKDRVF--P-LKLILMSATLRVEDFISGGRLFRNP 195
L E ++ S + KD V P L++ILMSATL E F F +
Sbjct: 659 LQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSD---YFNSC 715
Query: 196 PIIEVPTRQFPVTVHFSKRT-EIVDYI---GQAYKKVM 229
P+I +P R FPV F + + Y+ G Y + M
Sbjct: 716 PVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSM 753
Score = 66 (28.3 bits), Expect = 6.4e-37, Sum P(4) = 6.4e-37
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELS-----KSPVEFCNEYALHLKTMEEMSKLR 753
KE A +F+ SD L + A + ++LS ++ +C + L + ++EM+ L+
Sbjct: 1104 KEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLK 1163
Query: 754 KQLLHLL 760
+Q LL
Sbjct: 1164 RQFTELL 1170
Score = 57 (25.1 bits), Expect = 6.4e-37, Sum P(4) = 6.4e-37
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 236 PQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENK 273
P G ILVF+ G E++ L +L+ S L N+ + N+
Sbjct: 846 PPGAILVFLPGLAEIKMLYEQLQSNS---LFNNRRSNR 880
Score = 53 (23.7 bits), Expect = 1.4e-35, Sum P(4) = 1.4e-35
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 688 CRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSK 730
CRQ L R L+E+A L +F+ SD+ L+ E+ K
Sbjct: 1146 CRQNFLSGRVLQEMASLKR-QFTELLSDIGFAREGLRAREIEK 1187
Score = 44 (20.5 bits), Expect = 5.1e-17, Sum P(5) = 5.1e-17
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 249 EVEYLCSKLRKASKQLLVNSSKEN 272
E+EYL S+ RK+ + + +EN
Sbjct: 277 ELEYLTSRFRKSKPKESTKNVQEN 300
Score = 43 (20.2 bits), Expect = 5.1e-17, Sum P(5) = 5.1e-17
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 322 IDDNELDALSDSETESETEI-LGEDEK 347
+DD+ L+A+ D+ E EI +D K
Sbjct: 338 VDDSHLNAIEDASFLYELEIRFSKDHK 364
Score = 41 (19.5 bits), Expect = 5.1e-17, Sum P(5) = 5.1e-17
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 344 EDEKLVEQKCPMDGDDPVDVLKENWSLGSLK 374
E EK E + + D P V+ EN S +LK
Sbjct: 470 EVEKASESEESDEDDGPAPVIVENESYVNLK 500
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 252 (93.8 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 77/227 (33%), Positives = 120/227 (52%)
Query: 25 NEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN-RCSS 83
+E ++ R+ LP+ ++EI++ + +N V+I GETG GKTTQ+PQFL + F + C
Sbjct: 183 SEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPC-- 240
Query: 84 RSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVR-HDKKIGDSCSIKFMTDGILL 142
RI TQPRR+A +A A+RVA E +G+ +G+Q+R +++ + F T+G+LL
Sbjct: 241 ---RIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLL 297
Query: 143 RELKA-----------LYEKQQQLLRSGQCIEPKDRVF----P-LKLILMSATLRVEDFI 186
R L A + ++ + R + K R P LKLIL SA L V FI
Sbjct: 298 RTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFI 357
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK 233
R F + P+I + R F V F + +I+ G K+++ K
Sbjct: 358 ---RYFGSCPVIYIQGRPFEVKEMFLE--DILRTTGYTNKEMLKYKK 399
Score = 234 (87.4 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 55/194 (28%), Positives = 104/194 (53%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V L++ + + Q +V ++ G R +++STN+AETS+T+ + +V+D+G+ K K +++
Sbjct: 658 VFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDAL 717
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
N + ++ WISK C+RL+S F N+L +F E+ ++P+ +
Sbjct: 718 NFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNML-EFQTPELLRMPLQEL 776
Query: 559 VL---LMKSMNIDKVSNFPF--PTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
L L+ +N +++F P PP + A + LK ++A+D+ LT LG +A
Sbjct: 777 CLHTKLLAPVNCP-IADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADL 835
Query: 614 PMSPRHSRMLLTLI 627
P+ P +M+L +
Sbjct: 836 PVEPHLGKMVLCAV 849
Score = 57 (25.1 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 699 KEVAKLSHAKFSNPT-SDVLTVAYALQCFELSKSPV---EFCNEYALHLKTMEEMSKLRK 754
K A L +F+ T SD + + A Q ++ ++S FC + L TME + +R
Sbjct: 879 KRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRT 938
Query: 755 QLL 757
QLL
Sbjct: 939 QLL 941
Score = 48 (22.0 bits), Expect = 1.0e-35, Sum P(4) = 1.0e-35
Identities = 8/22 (36%), Positives = 17/22 (77%)
Query: 659 VLQLEGTQTNSNDSELEERDNA 680
+++++G +S+DSE+E+R A
Sbjct: 1025 MVKVDGIPNDSSDSEMEDRTTA 1046
Score = 45 (20.9 bits), Expect = 6.9e-16, Sum P(3) = 6.9e-16
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 486 DTGREKVKKYNSANGIESYEIQWISK 511
+ GREK + + SA ++++W+ K
Sbjct: 1297 EIGREKSQDWGSAGLGGVFKVEWVRK 1322
Score = 38 (18.4 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 303 YSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESETEIL 342
+ E Q R +++D+ D+ DA+ TE + L
Sbjct: 422 FKPESQRQRTVPNVTEEYDLLDDGGDAVFSQLTEKDVNCL 461
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 395 (144.1 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 94/270 (34%), Positives = 149/270 (55%)
Query: 10 QRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQ 69
+ P A P + ++ R+ LP+ +E++ A+ ++ +II GETG GKTTQ+PQ
Sbjct: 375 EEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQ 434
Query: 70 FLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD 129
+LFE G+ +++ +I TQPRRVA ++ A RVA E+G+ LG EVG+ +R + +
Sbjct: 435 YLFEEGY-----TNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSE 489
Query: 130 SCSIKFMTDGILLRELK-----ALY------EKQQQLLRSG---QCIEPKDRVFP-LKLI 174
+++MTDG+LLRE A Y E ++ L + I+ R P LK++
Sbjct: 490 RTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVL 549
Query: 175 LMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKR 234
+ SAT+ F + F + P+ +P R+FPV + ++K E DY+ V+ IH
Sbjct: 550 VASATMDTARFST---FFDDAPVFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQIHVT 605
Query: 235 LPQGGILVFVTGQREVEYLCSKLRKASKQL 264
P G ILVF+TGQ E+E C L+ ++L
Sbjct: 606 QPPGDILVFLTGQEEIEAACEMLQDRCRRL 635
Score = 67 (28.6 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 424 EKMGDN-KRAG--VGALCVLPLYAMLPAAAQLRVFEDVKEGER 463
E + D +R G + L VLP+YA LP+ Q R+F+ G R
Sbjct: 626 EMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGAR 668
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 232 (86.7 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 59/193 (30%), Positives = 101/193 (52%)
Query: 438 CVL-PLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
CV+ PL++ L + Q VF G +++STN+AETS+TI + YV+D+G+ K K+Y+
Sbjct: 876 CVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYD 935
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
++ G+ES E ++S+ C+ L++S FN+ L EI +VP++
Sbjct: 936 ASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLE 995
Query: 557 GVVLLMKSMNIDKVSNFP--FPT---PPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
+ L +K + + N F PP +L ++ L+ L AL + LT LG +A
Sbjct: 996 QLCLRIKILEMFSTHNLQSVFARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHLA 1055
Query: 612 HYPMSPRHSRMLL 624
P+ R +++L
Sbjct: 1056 SLPVDVRIGKLML 1068
Score = 230 (86.0 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 71/222 (31%), Positives = 111/222 (50%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
V R+ LP + I++ ++ + +++ G TGCGKTTQ+PQF+ + N +
Sbjct: 530 VLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSL--NGPPEKVA 587
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
I TQPRR++ ++ A+RVA E +G VG+Q+R + + + + T G+LLR L+
Sbjct: 588 NIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLE 647
Query: 147 ---ALY--------EKQQQLLRSG-QCIEPKDRVF--P-LKLILMSATLRVEDFISGGRL 191
AL E ++ S + KD V P L++ILMSATL E F
Sbjct: 648 GDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELF---SEY 704
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRT-EIVDYI---GQAYKKVM 229
F + P+I +P R FPV F + + Y+ G Y + M
Sbjct: 705 FNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYARSM 746
Score = 65 (27.9 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELS-----KSPVEFCNEYALHLKTMEEMSKLR 753
KE A +F+ SD L + A + ++LS ++ +C + L + ++EM+ L+
Sbjct: 1099 KEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLK 1158
Query: 754 KQLLHLL 760
+Q LL
Sbjct: 1159 RQFTELL 1165
Score = 57 (25.1 bits), Expect = 1.9e-35, Sum P(4) = 1.9e-35
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 688 CRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSK 730
CRQ L R L+E+A L +F+ SD+ V L+ E+ K
Sbjct: 1141 CRQNFLSGRVLQEMASLKR-QFTELLSDIGFVKEGLRAREIEK 1182
Score = 52 (23.4 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 232 HKRLPQ-GGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENK 273
H P G ILVF+ G E++ L +L+ S L N+ + N+
Sbjct: 836 HSYPPDPGAILVFLPGLAEIKMLYEQLQSNS---LFNNRRSNR 875
Score = 48 (22.0 bits), Expect = 8.7e-17, Sum P(3) = 8.7e-17
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 287 KDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDALSDSE 334
+D+ ++ + E +G S E++ D YD++Q+ E + DS+
Sbjct: 109 RDLQEQDADAGSE-RGVSGEEEDDE-PDYDDEQYWSPGREASLVPDSD 154
Score = 39 (18.8 bits), Expect = 7.2e-16, Sum P(3) = 7.2e-16
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 321 DIDDNELDALSDSETESETEI-LGEDEK 347
++DD+ L+A D+ E EI +D K
Sbjct: 329 NVDDSHLNANEDASFLYELEIRFSKDHK 356
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 241 (89.9 bits), Expect = 4.7e-36, Sum P(2) = 4.7e-36
Identities = 80/243 (32%), Positives = 124/243 (51%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
RK LP M +E++ ++ N ++I GETGCGKTTQV QF+ + F R R+
Sbjct: 217 RKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILD-DF-IQRGQGSLCRVVC 274
Query: 91 TQPRRVAVLATAKRVAFELGLHLG--KEVGFQVRHDKKIG-DSCSIKFMTDGILLRELKA 147
TQPRR++ ++ A+RVA E +G K G+Q+R ++ S+ + T G++L+ L +
Sbjct: 275 TQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHS 334
Query: 148 -----------LYEKQQQLLRSGQCIE-PKDRVFP---LKLILMSATLRVEDFISGGRLF 192
L E ++ ++S I KD + LK++LMSATL E F + F
Sbjct: 335 DPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKF---SKYF 391
Query: 193 RNPPIIEVPTRQFPVTVHFSKRTEIVDYIG-QAYKKVMSIH--KRLPQGGILVFVTGQRE 249
N P+I +P FPVT + + ++V+ +G Q K H KR G G+ E
Sbjct: 392 NNCPMIHIPGYTFPVTEYLLE--DVVELLGFQPRYKQRKPHYRKRNNHGSSARPEKGKIE 449
Query: 250 VEY 252
+Y
Sbjct: 450 AKY 452
Score = 238 (88.8 bits), Expect = 4.7e-36, Sum P(2) = 4.7e-36
Identities = 59/209 (28%), Positives = 106/209 (50%)
Query: 426 MGDNK-RAGVGALCVLPLYAMLPAAAQLRV-------FEDVKEGERLVVVSTNVAETSLT 477
M D ++G ++PL++++P +Q +V F+ G R +V++TN+AETS+T
Sbjct: 523 MSDQMFKSGRYRFIIIPLHSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSIT 582
Query: 478 IPGIKYVVDTGREKVKKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAV 537
I + YV+D G+ K +++ N I + +W+S CY LY+ +
Sbjct: 583 IDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYNG-L 641
Query: 538 FNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALE 595
++L ++ EI + P++ + L +K + + ++ F T PP A+ A L L
Sbjct: 642 RASLLDNYQLPEIQRTPLEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLN 701
Query: 596 ALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
ALD + +LT LG +A P+ P +M+L
Sbjct: 702 ALDRDEKLTPLGFHLARMPVEPHIGKMIL 730
Score = 38 (18.4 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 224 AYKKVMSIHKRLPQGGI---LV-FVTGQREV----EYLCSKLRKASKQLLVNSSKENKGN 275
AY +++ K+LP G+ LV ++ R + E C K + ++ +L + + +G+
Sbjct: 209 AYIEMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGS 268
Query: 276 QV-VADSEPNATKDINMKE 293
V ++P I++ E
Sbjct: 269 LCRVVCTQPRRISAISVAE 287
Score = 37 (18.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 6/7 (85%), Positives = 7/7 (100%)
Query: 356 DGDDPVD 362
DGDDPV+
Sbjct: 138 DGDDPVE 144
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 234 (87.4 bits), Expect = 7.0e-36, Sum P(4) = 7.0e-36
Identities = 59/193 (30%), Positives = 102/193 (52%)
Query: 438 CVL-PLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
CV+ PL++ L + Q VF G +++STN+AETS+TI + YV+D+G+ K K+Y+
Sbjct: 877 CVVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYD 936
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
++ G+ES E ++S+ C+ L++S FN+ L EI +VP++
Sbjct: 937 ASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLE 996
Query: 557 GVVLLMKSMNIDKVSNFP--FPT---PPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
+ L +K + + N F PP +L ++ L+ L AL + +LT LG +A
Sbjct: 997 QLCLRIKILEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLA 1056
Query: 612 HYPMSPRHSRMLL 624
P+ R +++L
Sbjct: 1057 SLPVDVRIGKLML 1069
Score = 224 (83.9 bits), Expect = 7.0e-36, Sum P(4) = 7.0e-36
Identities = 66/218 (30%), Positives = 108/218 (49%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP + I++ ++++ ++I G TGCGKTTQ+PQF+ + + I
Sbjct: 537 RQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGP--PEKVANIIC 594
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA--- 147
TQPRR++ ++ A+RVA E +G VG+Q+R + + + + T G+LLR L+
Sbjct: 595 TQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTS 654
Query: 148 -------LYEKQQQLLRSGQ--CIEPKDRVF--P-LKLILMSATLRVEDFISGGRLFRNP 195
+ ++ + + KD V P L++ILMSATL E F F +
Sbjct: 655 LQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELF---SEYFSSC 711
Query: 196 PIIEVPTRQFPVTVHFSKRT-EIVDYI---GQAYKKVM 229
P+I +P R FPV F + + Y+ G Y + M
Sbjct: 712 PVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSM 749
Score = 65 (27.9 bits), Expect = 7.0e-36, Sum P(4) = 7.0e-36
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELS-----KSPVEFCNEYALHLKTMEEMSKLR 753
KE A +F+ SD L + A + ++LS ++ +C + L + ++EM+ L+
Sbjct: 1100 KEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLK 1159
Query: 754 KQLLHLL 760
+Q LL
Sbjct: 1160 RQFTELL 1166
Score = 57 (25.1 bits), Expect = 4.6e-35, Sum P(4) = 4.6e-35
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 688 CRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSK 730
CRQ L R L+E+A L +F+ SD+ V L+ E+ K
Sbjct: 1142 CRQNFLSGRVLQEMASLKR-QFTELLSDIGFVKEGLRAREIEK 1183
Score = 52 (23.4 bits), Expect = 7.0e-36, Sum P(4) = 7.0e-36
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 236 PQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENK 273
P G ILVF+ G E++ L +L+ S L N+ + ++
Sbjct: 842 PPGAILVFLPGLAEIKMLYEQLQSNS---LFNNRRSHR 876
Score = 38 (18.4 bits), Expect = 2.1e-15, Sum P(4) = 2.1e-15
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 322 IDDNELDALSDSETESETEI-LGEDEK 347
+DD+ L+A D+ E EI +D K
Sbjct: 333 VDDSHLNAHEDASFLYELEIRFSKDHK 359
Score = 37 (18.1 bits), Expect = 2.1e-15, Sum P(4) = 2.1e-15
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 249 EVEYLCSKLRKASKQ 263
E+EYL SK K SKQ
Sbjct: 272 ELEYLTSKFCK-SKQ 285
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 249 (92.7 bits), Expect = 1.6e-34, Sum P(4) = 1.6e-34
Identities = 66/193 (34%), Positives = 100/193 (51%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
+ L VLPL+A L Q +VF G+R VVV+TNVAETS+TI I VVDTG+ K
Sbjct: 910 LNCLHVLPLHASLETKEQRKVFVPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKET 969
Query: 494 KYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKV 553
Y++AN + E + S CY+LY+ + + + + E+ +V
Sbjct: 970 SYDAANNMRRLEETFASLAACKQRRGRAGRVQAGECYKLYTRKLESQ-MAERPEPEMRRV 1028
Query: 554 PVDGVVLLMKSMNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
P++ + L +++M I V F PTPPE A+ A L+ + LD LTALG+ +A
Sbjct: 1029 PLEQLCLSVRAMGIADVRGFLARAPTPPEAAAVEGAITMLRRMGCLDGE-ELTALGRQLA 1087
Query: 612 HYPMSPRHSRMLL 624
P R ++++
Sbjct: 1088 AIPADLRCGKLMV 1100
Score = 208 (78.3 bits), Expect = 1.6e-34, Sum P(4) = 1.6e-34
Identities = 46/116 (39%), Positives = 69/116 (59%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP ++ EI+ V ++ II GETG GK+TQ QF+ + +G R + I V
Sbjct: 630 RQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYG--RGLGHAANILV 687
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
TQPRR++ L A RV+ E +G+EVG+ +R + + G I F+T G+LLR L+
Sbjct: 688 TQPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQ 743
Score = 73 (30.8 bits), Expect = 5.4e-15, Sum P(3) = 5.4e-15
Identities = 30/139 (21%), Positives = 60/139 (43%)
Query: 153 QQLLRSGQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFS 212
Q +R GQ +E R FP+ + +R+ F + P+ + + ++++
Sbjct: 811 QDGIRVGQ-VEIAGRTFPVTDYYLDDVIRMTQFGTANIRADADPVAKA-IQNLGTRINYN 868
Query: 213 KRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKAS--KQLLVNSSK 270
E + I +S+ ++ GGIL+F+ G E+ C LR + L +++S
Sbjct: 869 LLVETTEAIDNE----LSLAQK--SGGILIFLPGVAEINRACGMLRSLNCLHVLPLHASL 922
Query: 271 ENKGNQVVADSEPNATKDI 289
E K + V P+ + +
Sbjct: 923 ETKEQRKVFVPPPSGKRKV 941
Score = 56 (24.8 bits), Expect = 1.6e-34, Sum P(4) = 1.6e-34
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPI----IEVPTRQFPVTVHF 211
LKL+LMSATL F S F I +E+ R FPVT ++
Sbjct: 791 LKLVLMSATLDSATFAS---YFVQDGIRVGQVEIAGRTFPVTDYY 832
Score = 48 (22.0 bits), Expect = 1.6e-34, Sum P(4) = 1.6e-34
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFE-LSKSP-VE------FCNEYALHLKTMEEMS 750
++ A+ + A+F+ D+LT A Q ++ + + P V+ FC++ L T+ +++
Sbjct: 1132 RDQAREARARFAAGDGDLLTDLRAFQAWDAMMRDPSVQQRHVRSFCDDNFLSYLTLSDVA 1191
Query: 751 KLRKQ 755
R Q
Sbjct: 1192 SARTQ 1196
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 239 (89.2 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 69/216 (31%), Positives = 108/216 (50%)
Query: 417 ELSSP--DVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAET 474
E+SS ++ K DNK LPL++ L +A Q +F+ +G+R VVVSTN+AET
Sbjct: 832 EISSTIKEINKSSDNK------FMALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAET 885
Query: 475 SLTIPGIKYVVDTGREKV----KKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCY 530
S+TIP V+DTG+ K K N+ IES W S+ CY
Sbjct: 886 SITIPDCVAVIDTGKSKNLFFDHKLNTTKLIES----WCSQAEVRQRRGRAGRVTAGTCY 941
Query: 531 RLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFP--TPPEVTALVEAE 588
LY+ F + EI + ++ + L++KSM I V+ F P+ ++L +A
Sbjct: 942 HLYTKETFEAMQKQ-PIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDKSSLDKAN 1000
Query: 589 RCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
+ L + AL N LT LG +++ P P+ +++L+
Sbjct: 1001 QFLHEIGALQENS-LTKLGNYISYLPTDPQSAKLLI 1035
Score = 187 (70.9 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 44/139 (31%), Positives = 75/139 (53%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H E+ R LP ++ +M A+N +I GETG GK+TQV QF+ + +
Sbjct: 559 HSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKG 618
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+++ I TQPRR++ ++ A R++ E +G E G+ +R + K + I F T G
Sbjct: 619 DFTTK---IICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTG 675
Query: 140 ILLRELKALYEKQQQLLRS 158
+LLR L++ K+ +L++
Sbjct: 676 VLLRMLQS--SKKNGVLKN 692
Score = 72 (30.4 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 697 KLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
KLK++ K KF N D +++A A + +KS F E L T+++++ R Q
Sbjct: 1068 KLKQIQK----KFGNGQGDFISMANAYNAYMSNKSK-RFLTENYLSYTTIKDITSTRSQY 1122
Query: 757 LHLL 760
L LL
Sbjct: 1123 LSLL 1126
Score = 57 (25.1 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPI-IEVPTRQFPV 207
LK+IL+SAT+ V+ FI+ F P + + R +P+
Sbjct: 725 LKIILLSATISVDTFIN---FFEKPLTPLHIEGRTYPI 759
Score = 46 (21.3 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 231 IHKRLPQ-----GGILVFVTGQREVEYLCSKLRKAS 261
I KRL Q G IL+F+ G E+ ++ K+S
Sbjct: 809 IDKRLTQEAKQDGSILIFLPGVLEISSTIKEINKSS 844
Score = 38 (18.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 550 ISKVPVDGVVLLMKSMNIDKVSNFPFPTP 578
I +P ++LL ++++D NF F P
Sbjct: 719 IKSMPKLKIILLSATISVDTFINF-FEKP 746
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 239 (89.2 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 69/216 (31%), Positives = 108/216 (50%)
Query: 417 ELSSP--DVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAET 474
E+SS ++ K DNK LPL++ L +A Q +F+ +G+R VVVSTN+AET
Sbjct: 832 EISSTIKEINKSSDNK------FMALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAET 885
Query: 475 SLTIPGIKYVVDTGREKV----KKYNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCY 530
S+TIP V+DTG+ K K N+ IES W S+ CY
Sbjct: 886 SITIPDCVAVIDTGKSKNLFFDHKLNTTKLIES----WCSQAEVRQRRGRAGRVTAGTCY 941
Query: 531 RLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFP--TPPEVTALVEAE 588
LY+ F + EI + ++ + L++KSM I V+ F P+ ++L +A
Sbjct: 942 HLYTKETFEAMQKQ-PIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDKSSLDKAN 1000
Query: 589 RCLKALEALDSNGRLTALGKAMAHYPMSPRHSRMLL 624
+ L + AL N LT LG +++ P P+ +++L+
Sbjct: 1001 QFLHEIGALQENS-LTKLGNYISYLPTDPQSAKLLI 1035
Score = 187 (70.9 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 44/139 (31%), Positives = 75/139 (53%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H E+ R LP ++ +M A+N +I GETG GK+TQV QF+ + +
Sbjct: 559 HSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKG 618
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+++ I TQPRR++ ++ A R++ E +G E G+ +R + K + I F T G
Sbjct: 619 DFTTK---IICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTG 675
Query: 140 ILLRELKALYEKQQQLLRS 158
+LLR L++ K+ +L++
Sbjct: 676 VLLRMLQS--SKKNGVLKN 692
Score = 72 (30.4 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 697 KLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
KLK++ K KF N D +++A A + +KS F E L T+++++ R Q
Sbjct: 1068 KLKQIQK----KFGNGQGDFISMANAYNAYMSNKSK-RFLTENYLSYTTIKDITSTRSQY 1122
Query: 757 LHLL 760
L LL
Sbjct: 1123 LSLL 1126
Score = 57 (25.1 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPI-IEVPTRQFPV 207
LK+IL+SAT+ V+ FI+ F P + + R +P+
Sbjct: 725 LKIILLSATISVDTFIN---FFEKPLTPLHIEGRTYPI 759
Score = 46 (21.3 bits), Expect = 2.6e-34, Sum P(5) = 2.6e-34
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 231 IHKRLPQ-----GGILVFVTGQREVEYLCSKLRKAS 261
I KRL Q G IL+F+ G E+ ++ K+S
Sbjct: 809 IDKRLTQEAKQDGSILIFLPGVLEISSTIKEINKSS 844
Score = 38 (18.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 550 ISKVPVDGVVLLMKSMNIDKVSNFPFPTP 578
I +P ++LL ++++D NF F P
Sbjct: 719 IKSMPKLKIILLSATISVDTFINF-FEKP 746
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 231 (86.4 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 67/181 (37%), Positives = 99/181 (54%)
Query: 99 LATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-LKAL----Y---- 149
++ AKRV+ E+G +LG+EVG+ +R + +S IK+MTDGILLRE L+ Y
Sbjct: 1 MSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAII 60
Query: 150 --EKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTR 203
E ++ L + G E R LKLI+ SAT+ E F S F N PI +P R
Sbjct: 61 MDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAS---FFGNVPIFHIPGR 117
Query: 204 QFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQ 263
FPV + FSK T DY+ A K+ + +H G IL+F+ GQ ++E ++ + ++
Sbjct: 118 TFPVDILFSK-TPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEE 176
Query: 264 L 264
L
Sbjct: 177 L 177
Score = 177 (67.4 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 39/102 (38%), Positives = 63/102 (61%)
Query: 410 PTPEQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVST 469
P E S VE + + + A AL VLP+Y+ LP+ Q ++F+ +G R +V+T
Sbjct: 158 PGQEDIEVTSDQIVEHLEELENAP--ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT 215
Query: 470 NVAETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISK 511
N+AETSLT+ GI +V+D+G K+K +N G+++ +I IS+
Sbjct: 216 NIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 257
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 229 (85.7 bits), Expect = 5.4e-34, Sum P(4) = 5.4e-34
Identities = 64/198 (32%), Positives = 103/198 (52%)
Query: 29 NNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRI 88
+ R+ LP + I++ + + +++ G TGCGKTTQ+PQF+ +A + + I
Sbjct: 532 HERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGS--PNAVANI 589
Query: 89 GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA- 147
TQPRR++ ++ A+RVA E +G VG+Q+R + + + + T G+LLR L+
Sbjct: 590 ICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 649
Query: 148 ----------LYEKQQQLLRSG-QCIEPKDRVF--P-LKLILMSATLRVEDFISGGRLFR 193
+ E ++ S + KD + P L++ILMSATL E F + F
Sbjct: 650 LTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELF---SQYFH 706
Query: 194 NPPIIEVPTRQFPVTVHF 211
+ PII +P R FPV F
Sbjct: 707 SCPIINIPGRTFPVDQFF 724
Score = 225 (84.3 bits), Expect = 5.4e-34, Sum P(4) = 5.4e-34
Identities = 57/193 (29%), Positives = 101/193 (52%)
Query: 438 CVL-PLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
CV+ PL++ L + Q VF G +++STN+AETS+TI + YV+D+G+ K K+Y+
Sbjct: 874 CVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYD 933
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+ G+ES E ++S+ C+ L+SS +N+ L EI +VP++
Sbjct: 934 PSKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLE 993
Query: 557 GVVLLMKSMNIDKVSNFP-----FPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
+ L +K + + + PP +L ++ L+ L AL ++ +LT LG +A
Sbjct: 994 QLCLRIKILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPLGYHLA 1053
Query: 612 HYPMSPRHSRMLL 624
P+ R +++L
Sbjct: 1054 SLPVDVRIGKLML 1066
Score = 56 (24.8 bits), Expect = 5.4e-34, Sum P(4) = 5.4e-34
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELS-----KSPVEFCNEYALHLKTMEEMSKLR 753
+E A F+ SD L + A + + LS ++ +C E L + ++E++ L+
Sbjct: 1097 REEANKKKLDFAVGNSDYLALLQAYKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLK 1156
Query: 754 KQLLHLL 760
+Q LL
Sbjct: 1157 RQFTELL 1163
Score = 54 (24.1 bits), Expect = 3.1e-15, Sum P(4) = 3.1e-15
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 290 NMKEINEAF-EIQGYSTEQQTDRF--SSYDEDQFDIDDNELDALSDSETESET 339
N + + E E+QG ++DR S D+D+ D D+E +D E T
Sbjct: 109 NQRRVKELLRELQGQDLAPESDRVAGSGEDDDEPDYLDDEQCWSADQEVSDMT 161
Score = 50 (22.7 bits), Expect = 2.2e-33, Sum P(4) = 2.2e-33
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 688 CRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSK 730
CR+ L R L+E+A L +F+ SD+ V L+ ++ +
Sbjct: 1139 CRENFLSGRVLQEIASLKR-QFTELLSDIGFVKEGLRARDIER 1180
Score = 47 (21.6 bits), Expect = 5.4e-34, Sum P(4) = 5.4e-34
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 236 PQGGILVFVTGQREVEYLCSKLR 258
P G +L+F+ G E++ L +L+
Sbjct: 839 PPGAVLIFLPGLAEIKMLYEQLQ 861
Score = 45 (20.9 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 533 YSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLK 592
+SS V +L S ++ KV ++ + L++ + +D ++P P V + +K
Sbjct: 799 FSSGVNKTVLKTMSVMDLDKVNLELIEALLEWI-VDGKHSYP---PGAVLIFLPGLAEIK 854
Query: 593 AL-EALDSNGRLTAL-GKAMAHYPM 615
L E L SN K YP+
Sbjct: 855 MLYEQLQSNALFNNRHSKRCVVYPL 879
Score = 41 (19.5 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 10/51 (19%), Positives = 28/51 (54%)
Query: 256 KLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKE-INEAFEIQGYST 305
+L + K+ + +E++ QV+ ++E +N+K+ ++ +++ ST
Sbjct: 461 QLPEIQKEEVAEEEEEDEPQQVIVENESY----VNLKKKLSRKYDVHSKST 507
Score = 38 (18.4 bits), Expect = 3.1e-15, Sum P(4) = 3.1e-15
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 344 EDEKLVEQKCPMDGDDPVDVLKENWSLGSLK 374
+ E++ E++ + D+P V+ EN S +LK
Sbjct: 466 QKEEVAEEE---EEDEPQQVIVENESYVNLK 493
Score = 37 (18.1 bits), Expect = 1.6e-13, Sum P(4) = 1.6e-13
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 249 EVEYLCSKLRKASKQ 263
E+EYL ++L K SKQ
Sbjct: 274 ELEYLTNRLSK-SKQ 287
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 240 (89.5 bits), Expect = 5.9e-34, Sum P(3) = 5.9e-34
Identities = 84/310 (27%), Positives = 142/310 (45%)
Query: 438 CVL-PLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
CV+ PL++ L + Q VF G +++STN+AETS+TI + YV+D+G+ K K+Y+
Sbjct: 883 CVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYD 942
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+ G+ES E ++S+ C+ L++S +N+ L EI +VP++
Sbjct: 943 AGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLE 1002
Query: 557 GVVLLMKSMNIDKVSNFP--FPT---PPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
+ L +K + + N F PP + +L ++ L+ L AL + +LT LG +A
Sbjct: 1003 QLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLA 1062
Query: 612 HYPMSPRHSRMLLTLIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQ--LEGTQTNS 669
P+ R +++L L + A Q LE NS
Sbjct: 1063 SLPVDVRIGKLML-LGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANS 1121
Query: 670 N---------DSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVA 720
+ +L +++A S + CRQ L R L+E+A L +F+ SD+ V
Sbjct: 1122 DYLALLCAYKGWQLSTKESARASYN-YCRQNFLSGRTLQEMASLKR-QFTELLSDIGFVK 1179
Query: 721 YALQCFELSK 730
L+ E+ K
Sbjct: 1180 EGLRAKEIEK 1189
Score = 220 (82.5 bits), Expect = 5.9e-34, Sum P(3) = 5.9e-34
Identities = 74/239 (30%), Positives = 117/239 (48%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP + I++ ++ + V+I G TGCGKTTQ+PQF+ + N R I
Sbjct: 542 RQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSL--NGPPERVANIIC 599
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK--AL 148
TQPRR++ ++ A+RVA E +G VG+Q+R + + + + T G+LLR L+ A
Sbjct: 600 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDAT 659
Query: 149 YEKQQQLL------RSGQC----IEPKDRVFP---LKLILMSATLRVEDFISGGRLFRNP 195
+ ++ R+ + + KD V L++ILMSATL F + F
Sbjct: 660 LQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLF---SKYFSYC 716
Query: 196 PIIEVPTRQFPVTVHFSKRT-EIVDYIGQAYKKVMSIHKRLPQGGILVFV--TGQREVE 251
P+I +P R FPV F + + Y+ Q M K++ + + T Q EVE
Sbjct: 717 PVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQIAKEKLKARHNRTAQEEVE 775
Score = 70 (29.7 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELS-----KSPVEFCNEYALHLKTMEEMSKLR 753
KE A +F+ SD L + A + ++LS ++ +C + L +T++EM+ L+
Sbjct: 1106 KEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLK 1165
Query: 754 KQLLHLL 760
+Q LL
Sbjct: 1166 RQFTELL 1172
Score = 51 (23.0 bits), Expect = 5.9e-34, Sum P(3) = 5.9e-34
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 236 PQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENK 273
P G +LVF+ G E++ L +L+ S L N+ + ++
Sbjct: 848 PPGAVLVFLPGLAEIKMLYEQLQSNS---LFNNRRSHR 882
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 240 (89.5 bits), Expect = 6.5e-34, Sum P(3) = 6.5e-34
Identities = 85/310 (27%), Positives = 142/310 (45%)
Query: 438 CVL-PLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
CV+ PL++ L + Q VF G +++STN+AETS+TI + YV+D+G+ K K+Y+
Sbjct: 833 CVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYD 892
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+ G+ES E ++S+ C+ L++S +N+ L EI +VP++
Sbjct: 893 AGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLE 952
Query: 557 GVVLLMKSMNIDKVSNFP--FPT---PPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
+ L +K + + N F PP V +L ++ L+ L AL + +LT LG +A
Sbjct: 953 QLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLA 1012
Query: 612 HYPMSPRHSRMLLTLIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQ--LEGTQTNS 669
P+ R +++L L + A Q LE NS
Sbjct: 1013 SLPVDVRIGKLML-LGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANS 1071
Query: 670 N---------DSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVA 720
+ +L +++A S + CRQ L R L+E+A L +F+ SD+ V
Sbjct: 1072 DYLALLCAYKGWQLSTKESARASYN-YCRQNFLSGRTLQEMASLKR-QFTELLSDIGFVK 1129
Query: 721 YALQCFELSK 730
L+ E+ K
Sbjct: 1130 EGLRAKEIEK 1139
Score = 218 (81.8 bits), Expect = 6.5e-34, Sum P(3) = 6.5e-34
Identities = 69/218 (31%), Positives = 109/218 (50%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP + I++ ++ + V+I G TGCGKTTQ+PQF+ + N R I
Sbjct: 492 RQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSL--NGPPERVANIIC 549
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK--AL 148
TQPRR++ ++ A+RVA E +G VG+Q+R + + + + T G+LLR L+ A
Sbjct: 550 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDAT 609
Query: 149 YEKQQQLL------RSGQC----IEPKDRVFP---LKLILMSATLRVEDFISGGRLFRNP 195
+ ++ R+ + + KD V L++ILMSATL F + F
Sbjct: 610 LQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLF---SKYFSYC 666
Query: 196 PIIEVPTRQFPVTVHFSKRT-EIVDYI---GQAYKKVM 229
P+I +P R FPV F + + Y+ G Y + M
Sbjct: 667 PVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSM 704
Score = 70 (29.7 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELS-----KSPVEFCNEYALHLKTMEEMSKLR 753
KE A +F+ SD L + A + ++LS ++ +C + L +T++EM+ L+
Sbjct: 1056 KEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLK 1115
Query: 754 KQLLHLL 760
+Q LL
Sbjct: 1116 RQFTELL 1122
Score = 52 (23.4 bits), Expect = 6.5e-34, Sum P(3) = 6.5e-34
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 236 PQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENK 273
P G ILVF+ G E++ L +L+ S L N+ + ++
Sbjct: 798 PPGAILVFLPGLAEIKMLYEQLQSNS---LFNNRRSHR 832
Score = 43 (20.2 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 249 EVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQ 308
E+EYL +K K SK+ + N+ V D+ P K +K N F + + +
Sbjct: 227 ELEYLTNKFCK---------SKQKESNKNVRDTSPETCK-FYLKG-NCKFGSK-CKFKHE 274
Query: 309 TDRFSSYDEDQFDIDDNELDALSDSETESETEI-LGEDEK 347
+ +++D LDA +D+ E +I +D K
Sbjct: 275 VPPHQIIGRTERNVNDPHLDAENDTTFLYELQIRFSKDHK 314
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 240 (89.5 bits), Expect = 7.6e-34, Sum P(3) = 7.6e-34
Identities = 85/310 (27%), Positives = 142/310 (45%)
Query: 438 CVL-PLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
CV+ PL++ L + Q VF G +++STN+AETS+TI + YV+D+G+ K K+Y+
Sbjct: 886 CVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYD 945
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+ G+ES E ++S+ C+ L++S +N+ L EI +VP++
Sbjct: 946 AGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLE 1005
Query: 557 GVVLLMKSMNIDKVSNFP--FPT---PPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
+ L +K + + N F PP V +L ++ L+ L AL + +LT LG +A
Sbjct: 1006 QLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLA 1065
Query: 612 HYPMSPRHSRMLLTLIQTMKVKSYARXXXXXXXXXXXXXXXXXXXPFVLQ--LEGTQTNS 669
P+ R +++L L + A Q LE NS
Sbjct: 1066 SLPVDVRIGKLML-LGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANS 1124
Query: 670 N---------DSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVA 720
+ +L +++A S + CRQ L R L+E+A L +F+ SD+ V
Sbjct: 1125 DYLALLCAYKGWQLSTKESARASYN-YCRQNFLSGRTLQEMASLKR-QFTELLSDIGFVK 1182
Query: 721 YALQCFELSK 730
L+ E+ K
Sbjct: 1183 EGLRAKEIEK 1192
Score = 218 (81.8 bits), Expect = 7.6e-34, Sum P(3) = 7.6e-34
Identities = 69/218 (31%), Positives = 109/218 (50%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP + I++ ++ + V+I G TGCGKTTQ+PQF+ + N R I
Sbjct: 545 RQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSL--NGPPERVANIIC 602
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK--AL 148
TQPRR++ ++ A+RVA E +G VG+Q+R + + + + T G+LLR L+ A
Sbjct: 603 TQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDAT 662
Query: 149 YEKQQQLL------RSGQC----IEPKDRVFP---LKLILMSATLRVEDFISGGRLFRNP 195
+ ++ R+ + + KD V L++ILMSATL F + F
Sbjct: 663 LQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLF---SKYFSYC 719
Query: 196 PIIEVPTRQFPVTVHFSKRT-EIVDYI---GQAYKKVM 229
P+I +P R FPV F + + Y+ G Y + M
Sbjct: 720 PVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSM 757
Score = 70 (29.7 bits), Expect = 3.5e-16, Sum P(3) = 3.5e-16
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELS-----KSPVEFCNEYALHLKTMEEMSKLR 753
KE A +F+ SD L + A + ++LS ++ +C + L +T++EM+ L+
Sbjct: 1109 KEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLK 1168
Query: 754 KQLLHLL 760
+Q LL
Sbjct: 1169 RQFTELL 1175
Score = 52 (23.4 bits), Expect = 7.6e-34, Sum P(3) = 7.6e-34
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 236 PQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENK 273
P G ILVF+ G E++ L +L+ S L N+ + ++
Sbjct: 851 PPGAILVFLPGLAEIKMLYEQLQSNS---LFNNRRSHR 885
Score = 43 (20.2 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 249 EVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQ 308
E+EYL +K K SK+ + N+ V D+ P K +K N F + + +
Sbjct: 280 ELEYLTNKFCK---------SKQKESNKNVRDTSPETCK-FYLKG-NCKFGSK-CKFKHE 327
Query: 309 TDRFSSYDEDQFDIDDNELDALSDSETESETEI-LGEDEK 347
+ +++D LDA +D+ E +I +D K
Sbjct: 328 VPPHQIIGRTERNVNDPHLDAENDTTFLYELQIRFSKDHK 367
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 237 (88.5 bits), Expect = 1.9e-33, Sum P(3) = 1.9e-33
Identities = 71/205 (34%), Positives = 108/205 (52%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R V LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R
Sbjct: 423 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGR-G 481
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGIL 141
+R I +TQPRR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GIL
Sbjct: 482 ARCNVI-ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 540
Query: 142 LRELKA-----------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFI 186
LR+L++ + E ++ + + + + R+ P L+L+LMSAT E F
Sbjct: 541 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF- 599
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHF 211
R F P+I+VP +PV H+
Sbjct: 600 --SRYFGGCPVIKVPGFMYPVKEHY 622
Score = 214 (80.4 bits), Expect = 1.9e-33, Sum P(3) = 1.9e-33
Identities = 52/189 (27%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+T+ I +VVD+G K ++Y+
Sbjct: 701 ILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLK 760
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + ++P F EI + P++ +
Sbjct: 761 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLENL 819
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 820 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 879
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 880 DPRLAKAIV 888
Score = 52 (23.4 bits), Expect = 1.9e-33, Sum P(3) = 1.9e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 659 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 691
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 237 (88.5 bits), Expect = 2.5e-33, Sum P(3) = 2.5e-33
Identities = 71/205 (34%), Positives = 108/205 (52%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R V LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R
Sbjct: 451 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGR-G 509
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGIL 141
+R I +TQPRR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GIL
Sbjct: 510 ARCNVI-ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 568
Query: 142 LRELKA-----------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFI 186
LR+L++ + E ++ + + + + R+ P L+L+LMSAT E F
Sbjct: 569 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF- 627
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHF 211
R F P+I+VP +PV H+
Sbjct: 628 --SRYFGGCPVIKVPGFMYPVKEHY 650
Score = 214 (80.4 bits), Expect = 2.5e-33, Sum P(3) = 2.5e-33
Identities = 52/189 (27%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+T+ I +VVD+G K ++Y+
Sbjct: 732 ILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLK 791
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + ++P F EI + P++ +
Sbjct: 792 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLENL 850
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 851 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 910
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 911 DPRLAKAIV 919
Score = 52 (23.4 bits), Expect = 2.5e-33, Sum P(3) = 2.5e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 690 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 722
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 237 (88.5 bits), Expect = 2.5e-33, Sum P(3) = 2.5e-33
Identities = 71/205 (34%), Positives = 108/205 (52%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R V LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R
Sbjct: 451 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGR-G 509
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGIL 141
+R I +TQPRR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GIL
Sbjct: 510 ARCNVI-ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 568
Query: 142 LRELKA-----------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFI 186
LR+L++ + E ++ + + + + R+ P L+L+LMSAT E F
Sbjct: 569 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF- 627
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHF 211
R F P+I+VP +PV H+
Sbjct: 628 --SRYFGGCPVIKVPGFMYPVKEHY 650
Score = 214 (80.4 bits), Expect = 2.5e-33, Sum P(3) = 2.5e-33
Identities = 52/189 (27%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+T+ I +VVD+G K ++Y+
Sbjct: 729 ILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLK 788
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + ++P F EI + P++ +
Sbjct: 789 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLENL 847
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 848 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 907
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 908 DPRLAKAIV 916
Score = 52 (23.4 bits), Expect = 2.5e-33, Sum P(3) = 2.5e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 687 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 719
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 236 (88.1 bits), Expect = 2.6e-33, Sum P(3) = 2.6e-33
Identities = 71/205 (34%), Positives = 108/205 (52%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R V LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R
Sbjct: 451 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGR-G 509
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGIL 141
+R I +TQPRR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GIL
Sbjct: 510 ARCNVI-ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 568
Query: 142 LRELKA-----------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFI 186
LR+L++ + E ++ + + + + R+ P L+L+LMSAT E F
Sbjct: 569 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF- 627
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHF 211
R F P+I+VP +PV H+
Sbjct: 628 --SRYFGGCPVIKVPGFMYPVKEHY 650
Score = 215 (80.7 bits), Expect = 2.6e-33, Sum P(3) = 2.6e-33
Identities = 53/189 (28%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+TI I +VVD+G K ++Y+
Sbjct: 729 ILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLK 788
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + ++P F EI + P++ +
Sbjct: 789 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLENL 847
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 848 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 907
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 908 DPRLAKAIV 916
Score = 52 (23.4 bits), Expect = 2.6e-33, Sum P(3) = 2.6e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 687 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 719
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 235 (87.8 bits), Expect = 2.7e-33, Sum P(3) = 2.7e-33
Identities = 71/205 (34%), Positives = 108/205 (52%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R V LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R
Sbjct: 395 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGR-G 453
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD-SCSIKFMTDGIL 141
+R I +TQPRR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GIL
Sbjct: 454 ARCNVI-ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGIL 512
Query: 142 LRELKA-----------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFI 186
LR+L++ + E ++ + + + + R+ P L+L+LMSAT E F
Sbjct: 513 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF- 571
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHF 211
R F P+I+VP +PV H+
Sbjct: 572 --SRYFGGCPVIKVPGFMYPVKEHY 594
Score = 215 (80.7 bits), Expect = 2.7e-33, Sum P(3) = 2.7e-33
Identities = 53/189 (28%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+TI I +VVD+G K ++Y+
Sbjct: 673 ILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLK 732
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + ++P F EI + P++ +
Sbjct: 733 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLENL 791
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 792 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 851
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 852 DPRLAKAIV 860
Score = 52 (23.4 bits), Expect = 2.7e-33, Sum P(3) = 2.7e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 631 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 663
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 235 (87.8 bits), Expect = 3.0e-33, Sum P(3) = 3.0e-33
Identities = 71/205 (34%), Positives = 108/205 (52%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R V LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R
Sbjct: 423 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGR-G 481
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD-SCSIKFMTDGIL 141
+R I +TQPRR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GIL
Sbjct: 482 ARCNVI-ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGIL 540
Query: 142 LRELKA-----------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFI 186
LR+L++ + E ++ + + + + R+ P L+L+LMSAT E F
Sbjct: 541 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF- 599
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHF 211
R F P+I+VP +PV H+
Sbjct: 600 --SRYFGGCPVIKVPGFMYPVKEHY 622
Score = 215 (80.7 bits), Expect = 3.0e-33, Sum P(3) = 3.0e-33
Identities = 53/189 (28%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+TI I +VVD+G K ++Y+
Sbjct: 701 ILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLK 760
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + ++P F EI + P++ +
Sbjct: 761 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLENL 819
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 820 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 879
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 880 DPRLAKAIV 888
Score = 52 (23.4 bits), Expect = 3.0e-33, Sum P(3) = 3.0e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 659 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 691
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 238 (88.8 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 71/205 (34%), Positives = 109/205 (53%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R V LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R
Sbjct: 449 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGR-G 507
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGIL 141
+R I +TQPRR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GIL
Sbjct: 508 ARCNVI-ITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGIL 566
Query: 142 LRELKA-----------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFI 186
LR+L++ + E+ ++ + + + + R+ P L+L+LMSAT E F
Sbjct: 567 LRKLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF- 625
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHF 211
R F P+I+VP +PV H+
Sbjct: 626 --SRYFGGCPVIKVPGFMYPVKEHY 648
Score = 212 (79.7 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 53/189 (28%), Positives = 92/189 (48%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+TI I +VVD+G K ++Y+
Sbjct: 727 ILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLK 786
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + + P F EI + P++ +
Sbjct: 787 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAP-FQVPEILRTPLENL 845
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 846 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 905
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 906 DPRLAKAIV 914
Score = 52 (23.4 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 685 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 717
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 236 (88.1 bits), Expect = 5.3e-33, Sum P(3) = 5.3e-33
Identities = 71/205 (34%), Positives = 108/205 (52%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R V LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R
Sbjct: 449 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGR-G 507
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGIL 141
+R I +TQPRR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GIL
Sbjct: 508 ARCNVI-ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 566
Query: 142 LRELKA-----------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFI 186
LR+L++ + E ++ + + + + R+ P L+L+LMSAT E F
Sbjct: 567 LRKLQSNPSLEGVSHVVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF- 625
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHF 211
R F P+I+VP +PV H+
Sbjct: 626 --SRYFGGCPVIKVPGFMYPVKEHY 648
Score = 212 (79.7 bits), Expect = 5.3e-33, Sum P(3) = 5.3e-33
Identities = 53/189 (28%), Positives = 92/189 (48%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+TI I +VVD+G K ++Y+
Sbjct: 727 ILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLK 786
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + + P F EI + P++ +
Sbjct: 787 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAP-FQVPEILRTPLENL 845
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 846 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 905
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 906 DPRLAKAIV 914
Score = 52 (23.4 bits), Expect = 5.3e-33, Sum P(3) = 5.3e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 685 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 717
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 246 (91.7 bits), Expect = 5.8e-33, Sum P(4) = 5.8e-33
Identities = 75/226 (33%), Positives = 121/226 (53%)
Query: 25 NEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN-RCSS 83
+E ++ R+ LP+ ++EI++ + +N V+I GETG GKTTQ+PQFL + + + C
Sbjct: 94 SEYDSFRQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGVPC-- 151
Query: 84 RSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLR 143
RI TQPRR+AV+A A+RVA E +G+ VG+Q+R + ++ + F T+GILLR
Sbjct: 152 ---RIFCTQPRRLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLR 208
Query: 144 ELKA-----------LYEKQQQLLRSGQ--CIEPKDRV---FPLKLILMSATLRVEDFIS 187
L A + ++ + R I+ +D + LKLI+ SA L FI
Sbjct: 209 TLMAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFI- 267
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK 233
+ F + P+I + R F V F + +I+ G K+++ K
Sbjct: 268 --KYFGSCPVIHIQGRPFEVKEMFLE--DILRSTGYTNKEMIKYKK 309
Score = 212 (79.7 bits), Expect = 5.8e-33, Sum P(4) = 5.8e-33
Identities = 53/193 (27%), Positives = 95/193 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V L++ + Q V + G R +++STN+AETS+T+ + +V+D+G+ K K +++
Sbjct: 569 VFMLHSNMQTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDAL 628
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + + WISK C+ L+S F N+L +F E+ ++P+ +
Sbjct: 629 SCVTMLKTVWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNML-EFQTPELRRMPLQEL 687
Query: 559 VL---LMKSMNIDKVSNF-PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYP 614
L L+ +N V P PP + A + LK ++A+D LT LG +A P
Sbjct: 688 CLHTKLLAPVNCPVVDFLMKAPDPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELP 747
Query: 615 MSPRHSRMLLTLI 627
+ P +M+L +
Sbjct: 748 VEPHLGKMVLCAV 760
Score = 50 (22.7 bits), Expect = 5.8e-33, Sum P(4) = 5.8e-33
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 699 KEVAKLSHAKFSNPT-SDVLTVAYALQCFELSKSPV-E--FCNEYALHLKTMEEMSKLRK 754
K A L + + T SD + + A Q ++ ++S E FC + L TME + +R
Sbjct: 790 KRAAMLCRKRLAAGTFSDHMVLLRAFQAWQKARSDGWERVFCEKNFLSQATMEIIIGMRT 849
Query: 755 QLL 757
QLL
Sbjct: 850 QLL 852
Score = 38 (18.4 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 262 KQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFE 299
K+ +V KENK +V ++ T I +++ +E
Sbjct: 109 KEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYE 146
Score = 37 (18.1 bits), Expect = 5.8e-33, Sum P(4) = 5.8e-33
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 238 GGILVFVTGQREVEYLCSKLRKASKQLLVNS 268
G IL+F+ G E+ L ++ K+ + N+
Sbjct: 533 GAILIFLPGYDEIISLRDRIIFDDKRFVDNA 563
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 235 (87.8 bits), Expect = 6.2e-33, Sum P(3) = 6.2e-33
Identities = 71/205 (34%), Positives = 108/205 (52%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R V LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R
Sbjct: 423 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGR-G 481
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGIL 141
+R I +TQPRR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GIL
Sbjct: 482 ARCNVI-ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 540
Query: 142 LRELKA-----------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFI 186
LR+L++ + E ++ + + + + R+ P L+L+LMSAT E F
Sbjct: 541 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF- 599
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHF 211
R F P+I+VP +PV H+
Sbjct: 600 --SRYFGGCPVIKVPGFMYPVKEHY 622
Score = 212 (79.7 bits), Expect = 6.2e-33, Sum P(3) = 6.2e-33
Identities = 53/189 (28%), Positives = 92/189 (48%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS TI I +VVD+G K ++Y+
Sbjct: 701 ILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLK 760
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + ++P F EI + P++ +
Sbjct: 761 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLENL 819
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 820 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 879
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 880 EPRLAKAIV 888
Score = 52 (23.4 bits), Expect = 6.2e-33, Sum P(3) = 6.2e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 659 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 691
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 234 (87.4 bits), Expect = 6.3e-33, Sum P(3) = 6.3e-33
Identities = 69/194 (35%), Positives = 106/194 (54%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R +R I +TQP
Sbjct: 434 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGR-GARCNVI-ITQP 491
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGILLRELKA----- 147
RR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GILLR+L++
Sbjct: 492 RRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLE 551
Query: 148 ------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFISGGRLFRNPPI 197
+ E ++ + + + + R+ P L+L+LMSAT E F R F P+
Sbjct: 552 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF---SRYFGGCPV 608
Query: 198 IEVPTRQFPVTVHF 211
I+VP +PV H+
Sbjct: 609 IKVPGFMYPVKEHY 622
Score = 213 (80.0 bits), Expect = 6.3e-33, Sum P(3) = 6.3e-33
Identities = 52/189 (27%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+T+ I +VVD+G K ++Y+
Sbjct: 701 ILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLK 760
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + ++P F EI + P++ +
Sbjct: 761 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLENL 819
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 820 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 879
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 880 DPRLAKAIV 888
Score = 52 (23.4 bits), Expect = 6.3e-33, Sum P(3) = 6.3e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 659 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 691
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 234 (87.4 bits), Expect = 6.3e-33, Sum P(3) = 6.3e-33
Identities = 69/194 (35%), Positives = 106/194 (54%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R +R I +TQP
Sbjct: 434 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGR-GARCNVI-ITQP 491
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGILLRELKA----- 147
RR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GILLR+L++
Sbjct: 492 RRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLE 551
Query: 148 ------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFISGGRLFRNPPI 197
+ E ++ + + + + R+ P L+L+LMSAT E F R F P+
Sbjct: 552 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF---SRYFGGCPV 608
Query: 198 IEVPTRQFPVTVHF 211
I+VP +PV H+
Sbjct: 609 IKVPGFMYPVKEHY 622
Score = 213 (80.0 bits), Expect = 6.3e-33, Sum P(3) = 6.3e-33
Identities = 52/189 (27%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+T+ I +VVD+G K ++Y+
Sbjct: 701 ILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLK 760
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + ++P F EI + P++ +
Sbjct: 761 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLENL 819
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 820 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 879
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 880 DPRLAKAIV 888
Score = 52 (23.4 bits), Expect = 6.3e-33, Sum P(3) = 6.3e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 659 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 691
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 238 (88.8 bits), Expect = 6.3e-33, Sum P(3) = 6.3e-33
Identities = 80/251 (31%), Positives = 124/251 (49%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGF-GSNRC 81
R ++ + RK LP + I+ + + V+I GETGCGK+TQVPQF+ + F + +
Sbjct: 442 RYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQL 501
Query: 82 SSRSG----RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMT 137
++ I TQPRR++ + A+RVA E +G+ VG+Q+R + K+ S + F T
Sbjct: 502 PAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCT 561
Query: 138 DGILLRELKA--LYEKQQQLL--RSGQCIEPKDRVF-----------PLKLILMSATLRV 182
GILLR L + L ++ + E D + LK+ILMSATL
Sbjct: 562 TGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNA 621
Query: 183 EDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRT-EIVDYIGQAYKKVMSIHKRLPQGGIL 241
F F P++++P R FPV F + E+ D++ + K K+ Q IL
Sbjct: 622 ALFSD---YFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQE-IL 677
Query: 242 VFVTGQREVEY 252
+RE+EY
Sbjct: 678 -----ERELEY 683
Score = 214 (80.4 bits), Expect = 6.3e-33, Sum P(3) = 6.3e-33
Identities = 61/197 (30%), Positives = 99/197 (50%)
Query: 435 GALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKK 494
G ++PL++ L Q VF+ G+R +V+STN+AETS+TI +VVD G K K
Sbjct: 783 GKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKC 842
Query: 495 YNSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFN-NILPDFSCAEISKV 553
++S +ES ++ W+S+ C LY+S + +IL EI +V
Sbjct: 843 FDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQ-PVPEIQRV 901
Query: 554 PVDGVVLLMKSM------NIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALG 607
P++ +VL +K++ N V P E + L R L+ + ALD+ +LT LG
Sbjct: 902 PLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTR-LRDVGALDAEDQLTPLG 960
Query: 608 KAMAHYPMSPRHSRMLL 624
+A P+ R +++L
Sbjct: 961 HHLAALPVDVRIGKLML 977
Score = 48 (22.0 bits), Expect = 6.3e-33, Sum P(3) = 6.3e-33
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 735 FCNEYALHLKTMEEMSKLRKQLLHLL 760
+ +E+ L L T+E ++ L+ Q L LL
Sbjct: 1050 YASEHFLSLNTLETIADLKYQYLELL 1075
Score = 38 (18.4 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 416 PELSSPDVEKMGDNKRAGVG 435
PE D+ K D R G G
Sbjct: 66 PEFQLDDISKYKDRGRGGHG 85
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 234 (87.4 bits), Expect = 6.8e-33, Sum P(3) = 6.8e-33
Identities = 69/194 (35%), Positives = 106/194 (54%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R +R I +TQP
Sbjct: 457 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGR-GARCNVI-ITQP 514
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGILLRELKA----- 147
RR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GILLR+L++
Sbjct: 515 RRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLE 574
Query: 148 ------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFISGGRLFRNPPI 197
+ E ++ + + + + R+ P L+L+LMSAT E F R F P+
Sbjct: 575 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF---SRYFGGCPV 631
Query: 198 IEVPTRQFPVTVHF 211
I+VP +PV H+
Sbjct: 632 IKVPGFMYPVKEHY 645
Score = 213 (80.0 bits), Expect = 6.8e-33, Sum P(3) = 6.8e-33
Identities = 52/189 (27%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+T+ I +VVD+G K ++Y+
Sbjct: 724 ILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLK 783
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + ++P F EI + P++ +
Sbjct: 784 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLENL 842
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 843 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 902
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 903 DPRLAKAIV 911
Score = 52 (23.4 bits), Expect = 6.8e-33, Sum P(3) = 6.8e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 682 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 714
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 234 (87.4 bits), Expect = 6.9e-33, Sum P(3) = 6.9e-33
Identities = 69/194 (35%), Positives = 106/194 (54%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LP+ I+ A+ + V+I G+TGCGKTT++PQ L E R +R I +TQP
Sbjct: 462 LPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGR-GARCNVI-ITQP 519
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGILLRELKA----- 147
RR++ ++ A+RV+ ELG L + VGFQVR + K ++ F T GILLR+L++
Sbjct: 520 RRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLE 579
Query: 148 ------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFISGGRLFRNPPI 197
+ E ++ + + + + R+ P L+L+LMSAT E F R F P+
Sbjct: 580 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF---SRYFGGCPV 636
Query: 198 IEVPTRQFPVTVHF 211
I+VP +PV H+
Sbjct: 637 IKVPGFMYPVKEHY 650
Score = 213 (80.0 bits), Expect = 6.9e-33, Sum P(3) = 6.9e-33
Identities = 52/189 (27%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LP+++ +P Q +F+ G R +V++TN+AETS+T+ I +VVD+G K ++Y+
Sbjct: 729 ILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLK 788
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+S+ Y L+ + ++P F EI + P++ +
Sbjct: 789 TKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVP-FQVPEILRTPLENL 847
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VL K +K + F P + A+ EA L+ + LD LT LG+ +AH
Sbjct: 848 VLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIST 907
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 908 DPRLAKAIV 916
Score = 52 (23.4 bits), Expect = 6.9e-33, Sum P(3) = 6.9e-33
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKLRKA 260
V+ I R GGIL F+ G +E++ + +L++A
Sbjct: 687 VLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA 719
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 230 (86.0 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 63/191 (32%), Positives = 97/191 (50%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL++ L Q RVF+ G+R VVVSTN+AETS+TI +DTGR K YN
Sbjct: 894 VLPLHSALTPEDQKRVFKKY-HGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPK 952
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ +ISK Y+L+S ++ N + EI ++P++ +
Sbjct: 953 DNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESL 1012
Query: 559 VLLMKSMNIDKVSNF---PFPTPPEVTALVEAERCLKALEALDSNGR-LTALGKAMAHYP 614
L +K+M I V F PP + AL +AER L + +D + + LT LG+ ++ P
Sbjct: 1013 YLSVKAMGIKDVKAFLSTALDAPP-LPALQKAERILTTIGLVDESDKSLTQLGQFISLMP 1071
Query: 615 -MSPRHSRMLL 624
M +H ++L+
Sbjct: 1072 VMDSKHGKLLI 1082
Score = 215 (80.7 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 63/196 (32%), Positives = 103/196 (52%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP ++ I++ +N N V+I GETG GK+TQV QF+ + + +I
Sbjct: 601 REQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDF-LQKEKGDFGKTKIVC 659
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK---- 146
TQPRR++ + A+RV+ E + G+EVG+ +R K S IKFMT G+L+R L+
Sbjct: 660 TQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLLQNART 719
Query: 147 -------ALYEKQQQLLRSGQCIE-PKD---RVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ E ++ + + + K+ RV +K++LMSAT+ V+ F + F
Sbjct: 720 MLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLF---KKFFPGL 776
Query: 196 PIIEVPTRQFPVTVHF 211
+ R FP+T +F
Sbjct: 777 ATCHIEGRTFPITDYF 792
Score = 67 (28.6 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 31/124 (25%), Positives = 56/124 (45%)
Query: 167 RVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFS-----------KRT 215
RV +K++LMSAT+ V+ F + F + R FP+T +F KR
Sbjct: 751 RVRGMKIVLMSATVNVDLF---KKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKRE 807
Query: 216 EIVDYIGQAYKKVMSIHKRL-PQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKG 274
+ + Y + + + + L P+ F +GQ + LC + K+L ++ +N G
Sbjct: 808 KALSYDDDSVDERNNDDQYLKPRADSKFFTSGQINYDLLCQVVEYVHKRL--KAANDN-G 864
Query: 275 NQVV 278
+ +V
Sbjct: 865 SIIV 868
Score = 54 (24.1 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 231 IHKRLP----QGGILVFVTGQREVEYLCSKLRKASKQ 263
+HKRL G I+VF+ G E+ C+ L S +
Sbjct: 853 VHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNE 889
Score = 37 (18.1 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 257 LRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEI 294
L ++S+QL+ S KE Q S N T N +++
Sbjct: 271 LDESSRQLIETSLKEKIDWQAKKISHKNETIAENREDL 308
Score = 37 (18.1 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 489 REKVKKYNSANGIESYEIQWIS 510
R+ + YN N I+S Q+ S
Sbjct: 1154 RDNLLSYNKINEIKSSTAQYYS 1175
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 234 (87.4 bits), Expect = 9.5e-32, Sum P(2) = 9.5e-32
Identities = 62/189 (32%), Positives = 98/189 (51%)
Query: 440 LPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSAN 499
LPL+ L Q RVF++ G R V+ +TN+AETSLTIPG+KYV+D+G K KY
Sbjct: 552 LPLHGKLSFEEQFRVFQN-HPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRT 610
Query: 500 GIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVV 559
G+ ++ +S+ CYRLYS F+++ + EI +V + GV
Sbjct: 611 GMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMNLNQE-PEIRRVHL-GVA 668
Query: 560 LL-MKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEAL-DSNG--RLTALGKAMAHYPM 615
LL M ++ ++ ++ F F P A+ A + L L A+ + NG LT G + +
Sbjct: 669 LLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGL 728
Query: 616 SPRHSRMLL 624
P+ +++L
Sbjct: 729 EPKLGKLIL 737
Score = 210 (79.0 bits), Expect = 9.5e-32, Sum P(2) = 9.5e-32
Identities = 86/303 (28%), Positives = 129/303 (42%)
Query: 19 VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGS 78
+H E LPI ++I++ ++ +++ GETG GK+TQ+ QFL ++G +
Sbjct: 291 IHCLIRRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAA 350
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFEL-GLHLGKEVGFQVRHDKKIGDSCSIKFMT 137
S I TQPR++A + A RV E G + V S + +MT
Sbjct: 351 ------SESIVCTQPRKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMT 404
Query: 138 DGILL------RELKALY-----EKQQQLLRSGQCIE--PK--DRVFPLKLILMSATLRV 182
D LL R L + E ++ L + + K R L+L++MSAT
Sbjct: 405 DNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADA 464
Query: 183 EDFISGGRLFRNPPIIEVPTRQFPVTVHFSKR-TE-------IVDYIGQAYKKVMSIHKR 234
+ + F + I+ V R FPV + +S TE I Y+G K + IHK
Sbjct: 465 KQL---SQYFFSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKT 521
Query: 235 LPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQV-VADSEPNATKDINMKE 293
+G IL F+T Q EVE+ C + S L K + Q V + P K I
Sbjct: 522 EKEGTILAFLTSQAEVEWACERFITPSAIALPLHGKLSFEEQFRVFQNHPGRRKVIFATN 581
Query: 294 INE 296
I E
Sbjct: 582 IAE 584
Score = 40 (19.1 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 240 ILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEP-NATKDI---NMKEIN 295
IL + V+ + ++ + S+Q++ SSK +V + A +D+ ++E N
Sbjct: 190 ILSLMENGEGVKKVRLEIEEKSRQVVSFSSKRGLKFEVFEKKKAIEAERDLVVNRLEEFN 249
Query: 296 EAFE-IQGYSTEQQTDRFSSYDEDQFDIDDNE 326
A + I Y Q D +FD+DD E
Sbjct: 250 NAMKSILRYLIGQ--------DGYEFDLDDEE 273
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 237 (88.5 bits), Expect = 3.9e-31, Sum P(5) = 3.9e-31
Identities = 67/206 (32%), Positives = 110/206 (53%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E++ R LP +++++++ + VII G TGCGKTTQVPQF+ + +N+
Sbjct: 173 ELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNK----H 228
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
R+ VTQPRR+A ++ A+RVA E G +G+ VG+QVR D + D + + T G+LLR L
Sbjct: 229 VRVMVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLRML 288
Query: 146 KA--------------LYEKQQQ----LLRSGQCIEPKDRVFPLKLILMSATLRVEDFIS 187
+ ++E++ L+ +C++ + LK+ILMSAT+ +
Sbjct: 289 TSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRP---DLKVILMSATIEGNMQLF 345
Query: 188 GGRLFRNPP--IIEVPTRQFPVTVHF 211
F N +I + +R F V V +
Sbjct: 346 SN-YFENHSMDVIRIESRAFDVKVFY 370
Score = 176 (67.0 bits), Expect = 3.9e-31, Sum P(5) = 3.9e-31
Identities = 43/162 (26%), Positives = 84/162 (51%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL++ + + +F+ V + R ++++TN+AE S+TI + +VVDTG+ K K ++
Sbjct: 679 VLPLHSQMTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHE 738
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + ++ I++ +C RLY+ +N+ +P+ AE+ + + V
Sbjct: 739 AKLSTLTVKPIARSNADQRSGRAGRVANGYCIRLYTEQEYNS-MPETQIAEMKRAAIYDV 797
Query: 559 VLLMK--SMNIDKVSNFPF--PTPPEVTALVEAERCLKALEA 596
L K + K+S F P PPE ++++A L+ + A
Sbjct: 798 TLHAKLFAPKTLKISEFLSLAPEPPEKESILQAITFLEQIGA 839
Score = 62 (26.9 bits), Expect = 3.9e-31, Sum P(5) = 3.9e-31
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 603 LTALGKAMAHYPMSPRHSRMLL 624
LT LG+ MA P+ P+ SRMLL
Sbjct: 873 LTDLGRLMARLPLDPQLSRMLL 894
Score = 53 (23.7 bits), Expect = 3.9e-31, Sum P(5) = 3.9e-31
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 725 CFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
C + + +FC ++ L+ TM + R+QLL L
Sbjct: 955 CSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLREL 990
Score = 43 (20.2 bits), Expect = 3.9e-31, Sum P(5) = 3.9e-31
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 400 PEQCTELPPTPTP 412
P T+ PP+PTP
Sbjct: 534 PASTTKSPPSPTP 546
Score = 38 (18.4 bits), Expect = 9.8e-11, Sum P(5) = 9.8e-11
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 68 PQFLFEAGFGSNRCSSRSG 86
P F G S RCS R+G
Sbjct: 5 PPGFFRGGVDSKRCS-RNG 22
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 224 (83.9 bits), Expect = 9.7e-31, Sum P(3) = 9.7e-31
Identities = 67/206 (32%), Positives = 114/206 (55%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LP+ + I+ A+ N V+I G+TGCGKTT++PQ L E R +R + +TQP
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGR-GARCNVV-ITQP 535
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGILLRELKA----- 147
RR++ ++ A+RVA ELG ++ K VG+QVR + K ++ F T GILLR+L+
Sbjct: 536 RRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLE 595
Query: 148 ------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFISGGRLFRNPPI 197
+ E ++ + + + + ++ P L+L+LMSAT + F F + P+
Sbjct: 596 GVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRF---SHYFGDCPV 652
Query: 198 IEVPTRQFPVTVHFSKRTEIVDYIGQ 223
++VP +PV ++ + EI+ +G+
Sbjct: 653 VKVPGFMYPVKEYYLE--EILAKLGR 676
Score = 213 (80.0 bits), Expect = 9.7e-31, Sum P(3) = 9.7e-31
Identities = 53/189 (28%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLP+++ +P Q +F+ G R +V++TN+AETS+TI I +VVD+G K ++Y+
Sbjct: 744 VLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLK 803
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+SK Y L+ + + +P + EI + P++ +
Sbjct: 804 TKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDK-MPTYQVPEILRTPLENL 862
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
V+ K +K + F P++ A+ EA L+ + LD LT LGK +A
Sbjct: 863 VVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQIST 922
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 923 DPRLAKAIV 931
Score = 42 (19.8 bits), Expect = 9.7e-31, Sum P(3) = 9.7e-31
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKL 257
V+ I GGIL F+ G +E++ + +L
Sbjct: 702 VLQIDAHGEPGGILCFLPGWQEIKGVQQRL 731
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 223 (83.6 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 67/206 (32%), Positives = 113/206 (54%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LP+ + I+ A+ N V+I G+TGCGKTT++PQ L E R +R + +TQP
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGR-GARCNVV-ITQP 535
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI-GDSCSIKFMTDGILLRELKA----- 147
RR++ ++ A+RVA ELG ++ K VG+QVR + K ++ F T GILLR+L+
Sbjct: 536 RRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLE 595
Query: 148 ------LYEKQQQLLRSGQCI---EPKDRVFP-LKLILMSATLRVEDFISGGRLFRNPPI 197
+ E ++ + + + + ++ P L+L+LMSAT + F F P+
Sbjct: 596 GVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRF---SHYFGGCPV 652
Query: 198 IEVPTRQFPVTVHFSKRTEIVDYIGQ 223
++VP +PV ++ + EI+ +G+
Sbjct: 653 VKVPGFMYPVKEYYLE--EILAKLGR 676
Score = 213 (80.0 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 53/189 (28%), Positives = 93/189 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLP+++ +P Q +F+ G R +V++TN+AETS+TI I +VVD+G K ++Y+
Sbjct: 744 VLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLK 803
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ E W+SK Y L+ + + +P + EI + P++ +
Sbjct: 804 TKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDK-MPTYQVPEILRTPLENL 862
Query: 559 VLLMKSMNIDKVS-NFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
V+ K +K + F P++ A+ EA L+ + LD LT LGK +A
Sbjct: 863 VVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQIST 922
Query: 616 SPRHSRMLL 624
PR ++ ++
Sbjct: 923 DPRLAKAIV 931
Score = 42 (19.8 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 228 VMSIHKRLPQGGILVFVTGQREVEYLCSKL 257
V+ I GGIL F+ G +E++ + +L
Sbjct: 702 VLQIDAHGEPGGILCFLPGWQEIKGVQQRL 731
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 235 (87.8 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 63/189 (33%), Positives = 97/189 (51%)
Query: 440 LPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSAN 499
LPL+ L Q VF++ G R V+ +TN+AETSLTIPG+KYV+D+G K KY
Sbjct: 549 LPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRT 607
Query: 500 GIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVV 559
G+ ++ +S+ CYRLYS F+++ + EI +V + GV
Sbjct: 608 GMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQE-PEIRRVHL-GVA 665
Query: 560 LL-MKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEAL-DSNG--RLTALGKAMAHYPM 615
LL M ++ ID ++ F F P A+ A + L L A+ + NG LT G + +
Sbjct: 666 LLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGL 725
Query: 616 SPRHSRMLL 624
P+ +++L
Sbjct: 726 EPKLGKLIL 734
Score = 198 (74.8 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 85/303 (28%), Positives = 127/303 (41%)
Query: 19 VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGS 78
+H E LPI ++I++ ++ +++ GETG GK+TQ+ QFL ++G +
Sbjct: 288 IHYLILRECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAA 347
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFEL-GLHLGKEVGFQVRHDKKIGDSCSIKFMT 137
S I TQPR++A + RV E G + V S + +MT
Sbjct: 348 ------SESIVCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMT 401
Query: 138 DGILL------RELKALY-----EKQQQLLRSGQCI----EPKDRVFPLKLILMSATLRV 182
D LL R L + E ++ L + + + R L+L++MSAT
Sbjct: 402 DNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADA 461
Query: 183 EDFISGGRLFRNPPIIEVPTRQFPVTVHFSKR-TE-------IVDYIGQAYKKVMSIHKR 234
LF + I+ V R FPV + +S TE I Y G K + IHK
Sbjct: 462 NQLSQ--YLF-DCGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKT 518
Query: 235 LPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQ-VVADSEPNATKDINMKE 293
+G IL F+T Q EVE+ C + S L K + Q +V + P K I
Sbjct: 519 EKEGTILAFLTSQAEVEWACERFVAPSAIALPLHGKLSFEEQFMVFQNYPGRRKVIFATN 578
Query: 294 INE 296
I E
Sbjct: 579 IAE 581
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 289 (106.8 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 63/181 (34%), Positives = 93/181 (51%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD G K +N
Sbjct: 236 LLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHN 295
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G++ E+ ISK C+R+YS +N +PD EI + +
Sbjct: 296 PRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLT 355
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG +M +P+
Sbjct: 356 SVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLP 415
Query: 617 P 617
P
Sbjct: 416 P 416
Score = 122 (48.0 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 34/92 (36%), Positives = 46/92 (50%)
Query: 171 LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFS-----KRTEIVDYIGQAY 225
LK+++MSAT+ + + F N PI ++P R +PV F + E YI
Sbjct: 127 LKVVVMSATMELAKLSA---FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIV 183
Query: 226 KKVMSIHKRLPQGGILVFVTGQREVEYLCSKL 257
K M IH G ILVF+TGQ E+E C L
Sbjct: 184 KVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 215
Score = 50 (22.7 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 120 QVRHDKKIGDSCSIKFMTDGILLREL 145
Q + K I +IK+MTDG LL+ +
Sbjct: 56 QKQRKKIIQAETAIKYMTDGCLLKHI 81
Score = 49 (22.3 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 528 HCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSN-FPFPTPPEVTALVE 586
H RL S V + P +CA I +D LL+ + V N F P PE E
Sbjct: 401 HVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQK--E 458
Query: 587 AERCLKALEA 596
AE+ + L A
Sbjct: 459 AEQRHRELAA 468
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 218 (81.8 bits), Expect = 2.6e-30, Sum P(3) = 2.6e-30
Identities = 54/189 (28%), Positives = 95/189 (50%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPL++ + Q +VFE R +V+STN+AETS+TI + YV+D+ + K+K + +
Sbjct: 983 ILPLHSSVSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHETQ 1042
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXH-CYRLYSSAVFNNILPDFSCAEISKVPVDG 557
+ ++ W K CY + S +N L +F +E+ ++P+
Sbjct: 1043 RDLTLFQTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNT-LEEFQLSEMRRMPLHE 1101
Query: 558 VVLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
+ L +K + + V F PPE ++ A L L AL++N LT LG ++ P+
Sbjct: 1102 LCLQVKVLVLGDVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELTPLGLQLSFIPV 1161
Query: 616 SPRHSRMLL 624
PR +M++
Sbjct: 1162 DPRIGKMII 1170
Score = 216 (81.1 bits), Expect = 2.6e-30, Sum P(3) = 2.6e-30
Identities = 47/121 (38%), Positives = 73/121 (60%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+ R +LPI ++E++ +N +II G+TGCGKTTQ+PQF+ E S +
Sbjct: 710 IYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYCN- 768
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHD--KKIGDSCSIKFMTDGILLRE 144
I +TQPRR++VL A+R+A+E +G VG+Q+R D + +G S + T GILL+
Sbjct: 769 -IVMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTS-KLLVCTPGILLKR 826
Query: 145 L 145
+
Sbjct: 827 M 827
Score = 61 (26.5 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 28/124 (22%), Positives = 48/124 (38%)
Query: 267 NSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNE 326
N+S N N + N +IN IN + + + ++Y + +I++ +
Sbjct: 149 NNSNNNNNNNNQGQTSYNNNNNINNNIINSG--LNSLNNNNNNNNNNNYSGLENNINNYQ 206
Query: 327 LDALSDSETESETEILGEDEKLVEQKCPMDGDDPVDVLKENWSLGSLKLAFEVLSGKNAS 386
+ + + +L EQ P+ DP +L N S KL E LS +
Sbjct: 207 Q---TPPILQQQQPLLSNPINHFEQPAPVYAGDPFQLLHHN---DSNKLNDEYLSSYDRL 260
Query: 387 GPSS 390
G SS
Sbjct: 261 GQSS 264
Score = 47 (21.6 bits), Expect = 6.1e-13, Sum P(3) = 6.1e-13
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 267 NSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDN 325
N++ N N ++ N + N N F G S + ++SY+ D F+ +N
Sbjct: 26 NNNNNNNNNN---NNNNNNNSNNNNNNYNNNFSSGGRSNYNNYNNYNSYNND-FNNSNN 80
Score = 44 (20.5 bits), Expect = 2.6e-30, Sum P(3) = 2.6e-30
Identities = 7/24 (29%), Positives = 18/24 (75%)
Query: 734 EFCNEYALHLKTMEEMSKLRKQLL 757
++C ++ L + ++++ K++KQLL
Sbjct: 1260 QYCQDF-LSIPLLQQILKVKKQLL 1282
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 232 (86.7 bits), Expect = 5.4e-30, Sum P(3) = 5.4e-30
Identities = 54/189 (28%), Positives = 99/189 (52%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V+ L+++L Q F +G R +V++TN+AET +TIP + +V+DTGR K KY+ +
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + S ++SK C+R+Y+ F + D+S EI +VP++ +
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1018
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNG-RLTALGKAMAHYPM 615
L + N+ +F PP++ + A L+ + A + N +LT LG+ +A P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPV 1078
Query: 616 SPRHSRMLL 624
+ + +ML+
Sbjct: 1079 NVKIGKMLI 1087
Score = 188 (71.2 bits), Expect = 5.4e-30, Sum P(3) = 5.4e-30
Identities = 45/125 (36%), Positives = 72/125 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEA----GFGSNRCSSRSG 86
R+ LP+ I+E + + V++ GETG GK+TQVP FL E +G+++C+
Sbjct: 566 RQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN---- 621
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLG---KE--VGFQVRHDKKIGDSCSIKFMTDGIL 141
I TQPRR++ ++ A RV ELG G K G+Q+R + + +S + + T G+L
Sbjct: 622 -IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 142 LRELK 146
LR+L+
Sbjct: 681 LRKLQ 685
Score = 82 (33.9 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 118 GFQVRHDKKIGDSCSIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCI---- 162
G+Q+R + + +S + + T G+LLR+L+ + E ++ ++S +
Sbjct: 657 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILK 716
Query: 163 EPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIG 222
E + L LILMSAT+ E F + F + PI+ + R +PV V + +I++ G
Sbjct: 717 EILQKRSDLHLILMSATVDSEKFST---YFTHCPILRISGRSYPVEVFHLE--DIIEETG 771
Query: 223 QAYKK 227
+K
Sbjct: 772 FVLEK 776
Score = 53 (23.7 bits), Expect = 5.4e-30, Sum P(3) = 5.4e-30
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELS------KSPVEFCNEYALH---LKTMEEM 749
K+ A L+ + + SD LT+ A ++ + +S + +C L+ L T+EE+
Sbjct: 1118 KDEADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEI 1177
Query: 750 SKLRKQLLHLLF 761
+ R LL L+F
Sbjct: 1178 KRRRTTLLKLIF 1189
Score = 47 (21.6 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 15/67 (22%), Positives = 33/67 (49%)
Query: 261 SKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQF 320
S L + K+ + ++ E ++NMKE + Q + E++++ S +E++F
Sbjct: 198 SPPLQPKTKKQQEDRKIKPKEEKEL--EVNMKEWILRYAEQ-QNEEEKSETSKSLEEEKF 254
Query: 321 DIDDNEL 327
D ++ L
Sbjct: 255 DPNERYL 261
Score = 43 (20.2 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 392 MKLSTPAIPEQCTELPPTPTPEQCPELSSPDVE 424
+ LS A+PE ++ P+ P+ SP ++
Sbjct: 162 LNLSDDALPEGFSQEFEEQQPKNRPKFQSPQIQ 194
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 232 (86.7 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 54/189 (28%), Positives = 99/189 (52%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V+ L+++L Q F +G R +V++TN+AET +TIP + +V+DTGR K KY+ +
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + S ++SK C+R+Y+ F + D+S EI +VP++ +
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1018
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNG-RLTALGKAMAHYPM 615
L + N+ +F PP++ + A L+ + A + N +LT LG+ +A P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPV 1078
Query: 616 SPRHSRMLL 624
+ + +ML+
Sbjct: 1079 NVKIGKMLI 1087
Score = 188 (71.2 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 45/125 (36%), Positives = 72/125 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEA----GFGSNRCSSRSG 86
R+ LP+ I+E + + V++ GETG GK+TQVP FL E +G+++C+
Sbjct: 566 RQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN---- 621
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLG---KE--VGFQVRHDKKIGDSCSIKFMTDGIL 141
I TQPRR++ ++ A RV ELG G K G+Q+R + + +S + + T G+L
Sbjct: 622 -IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 142 LRELK 146
LR+L+
Sbjct: 681 LRKLQ 685
Score = 82 (33.9 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 118 GFQVRHDKKIGDSCSIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCI---- 162
G+Q+R + + +S + + T G+LLR+L+ + E ++ ++S +
Sbjct: 657 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILK 716
Query: 163 EPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIG 222
E + L LILMSAT+ E F + F + PI+ + R +PV V + +I++ G
Sbjct: 717 EILQKRSDLHLILMSATVDSEKFST---YFTHCPILRISGRSYPVEVFHLE--DIIEETG 771
Query: 223 QAYKK 227
+K
Sbjct: 772 FVLEK 776
Score = 47 (21.6 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 15/67 (22%), Positives = 33/67 (49%)
Query: 261 SKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQF 320
S L + K+ + ++ E ++NMKE + Q + E++++ S +E++F
Sbjct: 198 SPPLQPKTKKQQEDRKIKPKEEKEL--EVNMKEWILRYAEQ-QNEEEKSETSKSLEEEKF 254
Query: 321 DIDDNEL 327
D ++ L
Sbjct: 255 DPNERYL 261
Score = 43 (20.2 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 392 MKLSTPAIPEQCTELPPTPTPEQCPELSSPDVE 424
+ LS A+PE ++ P+ P+ SP ++
Sbjct: 162 LNLSDDALPEGFSQEFEEQQPKNRPKFQSPQIQ 194
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 211 (79.3 bits), Expect = 2.2e-29, Sum P(2) = 2.2e-29
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 438 CVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNS 497
C+ L++ L +A Q VF +G R +V+STN+AET +TIP + V+DTG + +YNS
Sbjct: 936 CIYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNS 995
Query: 498 ANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDG 557
+ ++SK CY L+S + + EI ++ +
Sbjct: 996 RRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQE 1055
Query: 558 VVLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VVL +K + V + PP T ++ A L + AL N +LT LGK ++ P+
Sbjct: 1056 VVLRVKMCQMGDVQDVLGKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPV 1115
Query: 616 SPRHSRMLL 624
++L+
Sbjct: 1116 DANLGKILV 1124
Score = 209 (78.6 bits), Expect = 2.2e-29, Sum P(2) = 2.2e-29
Identities = 64/197 (32%), Positives = 102/197 (51%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R LP M + I++AVN++ +II G+TGCGK+TQ+P FL E S + + ++ +I V
Sbjct: 628 RNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLE---NSTK-NGKAVKIYV 683
Query: 91 TQPRRVAVLATAKRVAFELG-----LHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
T+PRR++ ++ A RV+ ELG + VG+ VR D K + ++T G LR L
Sbjct: 684 TEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLL 743
Query: 146 KA-----------LYEKQQQLLRSGQCIEPKDRVF---P-LKLILMSATLRVEDFISGGR 190
+ + E ++ + S + + P LK+I+MSATL E F
Sbjct: 744 EVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKF---QL 800
Query: 191 LFRNPPIIEVPTRQFPV 207
F +I +P + +PV
Sbjct: 801 YFEGSNLITIPGKTYPV 817
Score = 62 (26.9 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 250 VEYLCSKLRKASKQLLVNSS--KENKGNQVVADSEP--NATKDI-NMKEINEAFEIQGYS 304
+E++ +KL KA +Q L N +E K N + DS+ +++KD N E N+
Sbjct: 353 IEFM-NKL-KALQQKLENERIVEEIKKNGIQEDSQSTDDSSKDDDNNSESNDMSPHNDAE 410
Query: 305 TEQQTDRF---SSYDEDQFDIDDNELDALSDSET 335
T D + +++++ DI D E D L+ + T
Sbjct: 411 TRADDDAYLMGDLFNQEEEDIQDTENDLLNANYT 444
Score = 60 (26.2 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 284 NATKDINMKEINEAF--EIQ--GYSTEQQTDRFSSYDEDQFDIDDNELDALSDSETESET 339
N K + K NE EI+ G + Q+ SS D+D + + N++ +D+ET ++
Sbjct: 357 NKLKALQQKLENERIVEEIKKNGIQEDSQSTDDSSKDDDN-NSESNDMSPHNDAETRADD 415
Query: 340 E--ILGEDEKLVEQKCPMDGDDPVDVLKENWSL 370
+ ++G+ L Q+ D D+L N++L
Sbjct: 416 DAYLMGD---LFNQEEEDIQDTENDLLNANYTL 445
Score = 40 (19.1 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 254 CSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINM 291
C K + LL NS+K K ++ +EP I++
Sbjct: 658 CGKSTQIPAFLLENSTKNGKAVKIYV-TEPRRISAISL 694
Score = 39 (18.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 18/85 (21%), Positives = 34/85 (40%)
Query: 346 EKLVEQKCPMDGDDPVDVLKENWSLGSLKLAFEVLSGKNASGPSSQMKLSTPAIPEQCTE 405
E L+ + P + +V N++ ++ E L N +S++ P + + +
Sbjct: 195 ENLINSE-PSNSSFSYEVQPSNYTT-FCRMLDEPLPANNPVQSNSRL---VPLMKDFSND 249
Query: 406 LPPTPTPEQCPELSSPDVEKMGDNK 430
+ TP E P D K D+K
Sbjct: 250 IKHTPNKETQPSNQVDDSLKSKDSK 274
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 229 (85.7 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 55/189 (29%), Positives = 98/189 (51%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V+ L+++L Q F G R +V++TN+AET +TIP + +V+DTGR K KY+ +
Sbjct: 899 VIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 958
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + S ++SK C+RLY+ F L D+S EI +VP++ +
Sbjct: 959 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFL-DYSVPEILRVPLEEL 1017
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNG-RLTALGKAMAHYPM 615
L + ++ +F PP++ + A L+ + A + N +LT LG+ +A P+
Sbjct: 1018 CLHIMKCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPV 1077
Query: 616 SPRHSRMLL 624
+ + +ML+
Sbjct: 1078 NVKIGKMLI 1086
Score = 200 (75.5 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 44/121 (36%), Positives = 68/121 (56%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP+ I+E + + V++ GETG GK+TQVP FL E + C +R I
Sbjct: 568 RQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLE-DLLLDECGARKCNIVC 626
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKE-----VGFQVRHDKKIGDSCSIKFMTDGILLREL 145
TQPRR++ ++ A RV ELG G G+Q+R + + +S + + T G+LLR+L
Sbjct: 627 TQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 686
Query: 146 K 146
+
Sbjct: 687 Q 687
Score = 80 (33.2 bits), Expect = 5.4e-17, Sum P(3) = 5.4e-17
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 118 GFQVRHDKKIGDSCSIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCI---- 162
G+Q+R + + +S + + T G+LLR+L+ + E ++ ++S +
Sbjct: 659 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILK 718
Query: 163 EPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIG 222
E + L LILMSAT+ + F + F + PI+ + R +PV V + +IV+ G
Sbjct: 719 EILQKRSDLHLILMSATVDSDKFST---YFTHCPILRISGRSYPVEVFHLE--DIVEETG 773
Query: 223 QAYKK 227
+K
Sbjct: 774 FVLEK 778
Score = 38 (18.4 bits), Expect = 2.3e-29, Sum P(3) = 2.3e-29
Identities = 13/68 (19%), Positives = 34/68 (50%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELS------KSPVEFCNEYALHLKTMEEMSKL 752
K+ A L+ + + SD LT+ A ++ + +S + +C L+ ++ + +
Sbjct: 1117 KDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDV 1176
Query: 753 RKQLLHLL 760
+++L+ L+
Sbjct: 1177 KQELMKLV 1184
Score = 38 (18.4 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 12/60 (20%), Positives = 26/60 (43%)
Query: 269 SKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELD 328
+K + + + + T ++NMKE + Q E+ +E++FD + L+
Sbjct: 205 TKRQEEDPKIKPKKEETTVEVNMKEWILRYAEQQDEEEKGEGSKGLEEEEKFDPNQRYLN 264
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 240 (89.5 bits), Expect = 4.8e-29, Sum P(3) = 4.8e-29
Identities = 55/188 (29%), Positives = 96/188 (51%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
+LPL++ + + Q +VF +G R V+++TN+AETS+TI + YV+D+G+ K +YN
Sbjct: 916 LLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPH 975
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ S W+SK HC+ LY+ F ++ + E+ +VP+ +
Sbjct: 976 KKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVEL 1035
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
L +K + + ++ F PP +A+ A L + AL+ + LT LG +A P+
Sbjct: 1036 CLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVD 1095
Query: 617 PRHSRMLL 624
+MLL
Sbjct: 1096 LLIGKMLL 1103
Score = 172 (65.6 bits), Expect = 4.8e-29, Sum P(3) = 4.8e-29
Identities = 46/120 (38%), Positives = 65/120 (54%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R LPI ++++I++ + + +++CGETG GKTTQVPQF+ + S + I
Sbjct: 594 RAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCN--IIC 651
Query: 91 TQPRRVAVLATAKRVAFEL-----GLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
TQPR + V A+RVA E G V +QVRH D + F T GILLR+L
Sbjct: 652 TQPRAITV---AQRVADERCEPPPGFD-NSVVAYQVRHQNARSDKTRLLFCTTGILLRKL 707
Score = 79 (32.9 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 37/105 (35%), Positives = 44/105 (41%)
Query: 110 GLHLGKEVGFQVRHDKK--IGDSCSIKFMTDGILLRELKALYEKQQQLLRSGQCIEPKDR 167
G+ L K VG D I D + + LL LK+L EKQ D
Sbjct: 701 GILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSW-----------DN 749
Query: 168 VFP-LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHF 211
P LK+ILMSAT+ F R F PII R PVT +F
Sbjct: 750 ALPKLKVILMSATVDAHQF---SRYFGQCPIITAQGRTHPVTTYF 791
Score = 52 (23.4 bits), Expect = 4.8e-29, Sum P(3) = 4.8e-29
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 217 IVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKL 257
+VDY + + I +G ILVF+ G E+ L ++L
Sbjct: 863 VVDY-DLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRL 902
Score = 37 (18.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 219 DYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
D+ A V + K +P+ +LV V +R+ E
Sbjct: 146 DWNVSAESSVQEV-KEVPESEVLVRVKSKRDEE 177
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 220 (82.5 bits), Expect = 5.1e-29, Sum P(3) = 5.1e-29
Identities = 54/186 (29%), Positives = 96/186 (51%)
Query: 442 LYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANGI 501
L++ + AA Q ++F+ V G R +++++N+AETS+TIP + +VVD G+ + +KY+ + I
Sbjct: 918 LHSAVSAAEQNKIFQKVPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDRKYDRSTRI 977
Query: 502 ESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVLL 561
W +K H Y LYS ++ D + E+ K+ + L
Sbjct: 978 TGMYTGWQTKSKAMQRQGRAGRTQEGHYYGLYSEQRRQSMKDD-ALPEMLKLDLTNTCLS 1036
Query: 562 MKSMNI-DKVSNFPFP--TPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
+K D V++F +PP + + +A LKA++AL N +T+LG + P+ P
Sbjct: 1037 VKGFGFRDSVADFLAAAISPPPPSVVQDAVNSLKAMDALAENEGITSLGHLLLRIPLHPL 1096
Query: 619 HSRMLL 624
+M+L
Sbjct: 1097 LGKMIL 1102
Score = 206 (77.6 bits), Expect = 5.1e-29, Sum P(3) = 5.1e-29
Identities = 61/196 (31%), Positives = 100/196 (51%)
Query: 7 SSLQRPLAAPIVVH-VSRPNE-VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKT 64
SSL R LAA + + R E + R LP+ ++++ V + I+ G TG GK+
Sbjct: 556 SSLNRRLAARLEAYQADRHLEHIRAQRASLPMNKHRKQLLNLVEGSHFCIVIGATGSGKS 615
Query: 65 TQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHD 124
TQVPQ + + R + RI QPRR A + A+RVA E G LG+ VGF++R D
Sbjct: 616 TQVPQIILDDAIKQGRGADT--RILCLQPRRAAAMWVAQRVASERGERLGESVGFRIRFD 673
Query: 125 KKIGD--SCSIKFMTDGILLRELKALYEKQQQLLRSGQCIEPKDRVFPLKLILMSATLRV 182
++ + ++ F+T GILL++L+ ++ + E +R L L+L+ +
Sbjct: 674 ARLANRQGGTVSFVTLGILLKQLQDGVQETLDMYSHIVIDEVHERSLELDLLLVVLKKAI 733
Query: 183 EDFISGGRLFRNPPII 198
+ ++ G+ P II
Sbjct: 734 AERLAKGQSL--PKII 747
Score = 52 (23.4 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 165 KDRVFPLKLILMSATL----RVEDFISG----GRLFRNP-----PIIEVPTRQFPVT 208
K + P K+ILMSA++ +++++++ G+ R P PI+ +P R FPV+
Sbjct: 739 KGQSLP-KIILMSASISNQEQLQEYLADSLHDGKARRLPAHQACPILSIPGRTFPVS 794
Score = 50 (22.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 209 VHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSKL 257
V F + ++V + A+++++ +R PQG G E+E L ++
Sbjct: 1372 VQFREHMDVV--LDDAFRRLLFQQQRGPQGSASAICAGTPELEDLVDRV 1418
Score = 39 (18.8 bits), Expect = 5.1e-29, Sum P(3) = 5.1e-29
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 238 GGILVFVTGQREVEYLCSKLR 258
G ILVF+ G +E+ + LR
Sbjct: 872 GDILVFLPGIKEIRSVNDVLR 892
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 232 (86.7 bits), Expect = 5.9e-29, Sum P(3) = 5.9e-29
Identities = 54/189 (28%), Positives = 99/189 (52%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V+ L+++L Q F +G R +V++TN+AET +TIP + +V+DTGR K KY+ +
Sbjct: 900 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + S ++SK C+R+Y+ F + D+S EI +VP++ +
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1018
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNG-RLTALGKAMAHYPM 615
L + N+ +F PP++ + A L+ + A + N +LT LG+ +A P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPV 1078
Query: 616 SPRHSRMLL 624
+ + +ML+
Sbjct: 1079 NVKIGKMLI 1087
Score = 188 (71.2 bits), Expect = 5.9e-29, Sum P(3) = 5.9e-29
Identities = 45/125 (36%), Positives = 72/125 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEA----GFGSNRCSSRSG 86
R+ LP+ I+E + + V++ GETG GK+TQVP FL E +G+++C+
Sbjct: 566 RQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN---- 621
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLG---KE--VGFQVRHDKKIGDSCSIKFMTDGIL 141
I TQPRR++ ++ A RV ELG G K G+Q+R + + +S + + T G+L
Sbjct: 622 -IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 142 LRELK 146
LR+L+
Sbjct: 681 LRKLQ 685
Score = 82 (33.9 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 118 GFQVRHDKKIGDSCSIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCI---- 162
G+Q+R + + +S + + T G+LLR+L+ + E ++ ++S +
Sbjct: 657 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILK 716
Query: 163 EPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIG 222
E + L LILMSAT+ E F + F + PI+ + R +PV V + +I++ G
Sbjct: 717 EILQKRSDLHLILMSATVDSEKFST---YFTHCPILRISGRSYPVEVFHLE--DIIEETG 771
Query: 223 QAYKK 227
+K
Sbjct: 772 FVLEK 776
Score = 47 (21.6 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 15/67 (22%), Positives = 33/67 (49%)
Query: 261 SKQLLVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQF 320
S L + K+ + ++ E ++NMKE + Q + E++++ S +E++F
Sbjct: 198 SPPLQPKTKKQQEDRKIKPKEEKEL--EVNMKEWILRYAEQ-QNEEEKSETSKSLEEEKF 254
Query: 321 DIDDNEL 327
D ++ L
Sbjct: 255 DPNERYL 261
Score = 43 (20.2 bits), Expect = 5.9e-29, Sum P(3) = 5.9e-29
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELS------KSPVEFCNEYALHLKTMEEMSKL 752
K+ A L+ + + SD LT+ A ++ + +S + +C L+ ++ + +
Sbjct: 1118 KDEADLAKSALAMADSDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLERR 1177
Query: 753 RKQLLHLLFNQN 764
R LL L+ N+N
Sbjct: 1178 RTTLLKLM-NEN 1188
Score = 43 (20.2 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 392 MKLSTPAIPEQCTELPPTPTPEQCPELSSPDVE 424
+ LS A+PE ++ P+ P+ SP ++
Sbjct: 162 LNLSDDALPEGFSQEFEEQQPKNRPKFQSPQIQ 194
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 229 (85.7 bits), Expect = 7.2e-29, Sum P(2) = 7.2e-29
Identities = 54/189 (28%), Positives = 98/189 (51%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V+ L+++L Q F G R +V++TN+AET +TIP + +V+DTGR K KY+ +
Sbjct: 900 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + S ++SK C+R+Y+ F + D+S EI +VP++ +
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1018
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNG-RLTALGKAMAHYPM 615
L + N+ +F PP++ + A L+ + A + N +LT LG+ +A P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPV 1078
Query: 616 SPRHSRMLL 624
+ + +ML+
Sbjct: 1079 NVKIGKMLI 1087
Score = 185 (70.2 bits), Expect = 7.2e-29, Sum P(2) = 7.2e-29
Identities = 43/121 (35%), Positives = 66/121 (54%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP+ I+E + + V++ GETG GK+TQVP FL E N + I
Sbjct: 569 RQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLE-DLLLNEWEASKCNIVC 627
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKE-----VGFQVRHDKKIGDSCSIKFMTDGILLREL 145
TQPRR++ ++ A RV ELG G G+Q+R + + +S + + T G+LLR+L
Sbjct: 628 TQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKL 687
Query: 146 K 146
+
Sbjct: 688 Q 688
Score = 80 (33.2 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 36/125 (28%), Positives = 61/125 (48%)
Query: 118 GFQVRHDKKIGDSCSIKFMTDGILLRELK--ALYEKQQQLL------RSGQC----IEPK 165
G+Q+R + + +S + + T G+LLR+L+ L ++ RS Q I K
Sbjct: 660 GYQIRMESRACESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILK 719
Query: 166 D---RVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIG 222
+ + L LILMSAT+ E F + F + PI+ + R +PV V + +I++ G
Sbjct: 720 EILQKRSDLHLILMSATVDSEKFST---YFTHCPILRISGRSYPVEVFHLE--DIIEETG 774
Query: 223 QAYKK 227
+K
Sbjct: 775 FVLEK 779
Score = 43 (20.2 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 392 MKLSTPAIPEQCTELPPTPTPEQCPELSSPDVE 424
+ LS A+PE ++ P+ P+ SP ++
Sbjct: 164 LNLSDDALPEGFSQEFEEQQPKSRPKFQSPQIQ 196
Score = 42 (19.8 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 288 DINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELDA---LSDSETESET 339
++NMKE + Q E+ + S +E++FD ++ L L D++ ++ T
Sbjct: 226 EVNMKEWILRYAEQQNEEEKNENSKSLEEEEKFDPNERYLHLAAKLLDAKEQAAT 280
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 214 (80.4 bits), Expect = 8.8e-29, Sum P(2) = 8.8e-29
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERL-VVVSTNVAETSLTIPGIKYVVDTGREKVKKY 495
+ ++ L++ + + Q +VF G RL +++STN+ +TS+TIP + YV+DTG K+K Y
Sbjct: 489 ITIILLHSQVDNSEQRKVFRTYP-GVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTY 547
Query: 496 NSANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPV 555
+S + WIS+ +CYRLY + + ++ EI + +
Sbjct: 548 DSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMAR-MNLYTIPEIMRRTL 606
Query: 556 DGVVLLMKSMNIDK-VSNF---PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
D + LL K DK + NF TPP+ + R LK L LD +T LG +A
Sbjct: 607 DEICLLTKLAAPDKKIENFLALALDTPPKDAVMQSCSR-LKLLGVLDERDEVTPLGHIVA 665
Query: 612 HYPMSPRHSRMLL 624
P+ + + L+
Sbjct: 666 ELPLGVQIGKCLV 678
Score = 196 (74.1 bits), Expect = 8.8e-29, Sum P(2) = 8.8e-29
Identities = 58/206 (28%), Positives = 102/206 (49%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
+R +++ R+ LPI + I+ + + +II G TG GK+TQ+PQ++ E +R
Sbjct: 197 NRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWA-AEHRA 255
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
R I V+QPRR+A ++ ++R++ E G G VG+ +R +++ + + T G L
Sbjct: 256 PVR---IVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCL 312
Query: 142 LREL----KALYEKQQQLLRSGQCIEPKDRVF------------P-LKLILMSATLRVED 184
LR L K+ ++ L+ D F P L+L+LMSAT+ +E
Sbjct: 313 LRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEA 372
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVH 210
F +++V R F V+++
Sbjct: 373 L---SNYFGGGTVMDVEGRSFEVSIY 395
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 226 (84.6 bits), Expect = 9.4e-29, Sum P(2) = 9.4e-29
Identities = 54/189 (28%), Positives = 97/189 (51%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V+ L+++L Q F G R +V++TN+AET +TIP + +V+DTGR K KY+ +
Sbjct: 897 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 956
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + S ++SK C+R+Y+ F + D+S EI +VP++ +
Sbjct: 957 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1015
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNG-RLTALGKAMAHYPM 615
L + N+ +F PP++ + A L+ + A + N LT LG+ +A P+
Sbjct: 1016 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPV 1075
Query: 616 SPRHSRMLL 624
+ + +ML+
Sbjct: 1076 NVKIGKMLI 1084
Score = 187 (70.9 bits), Expect = 9.4e-29, Sum P(2) = 9.4e-29
Identities = 44/125 (35%), Positives = 71/125 (56%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEA----GFGSNRCSSRSG 86
R+ LP+ I+E + + V++ GETG GK+TQVP FL E +G+++C+
Sbjct: 566 RQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN---- 621
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKE-----VGFQVRHDKKIGDSCSIKFMTDGIL 141
I TQPRR++ ++ A RV ELG G G+Q+R + + +S + + T G+L
Sbjct: 622 -IVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 142 LRELK 146
LR+L+
Sbjct: 681 LRKLQ 685
Score = 83 (34.3 bits), Expect = 6.8e-18, Sum P(2) = 6.8e-18
Identities = 34/125 (27%), Positives = 61/125 (48%)
Query: 118 GFQVRHDKKIGDSCSIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCI---- 162
G+Q+R + + +S + + T G+LLR+L+ + E ++ ++S +
Sbjct: 657 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILK 716
Query: 163 EPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIG 222
E + L LILMSAT+ E F + F + PI+ + R +PV V + +IV+ G
Sbjct: 717 EILQKRSDLHLILMSATVDSEKFST---YFTHCPILRISGRSYPVEVFHLE--DIVEETG 771
Query: 223 QAYKK 227
+K
Sbjct: 772 FVLEK 776
Score = 45 (20.9 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 17/78 (21%), Positives = 37/78 (47%)
Query: 265 LVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDD 324
L + +K+ + ++ E ++NMKE + Q E+ + S +E++FD ++
Sbjct: 201 LQSKTKKQEDTKIKPKKEEK-NLEVNMKEWILRYAEQQNEEEKSENSKSLEEEEKFDPNE 259
Query: 325 NELDA---LSDSETESET 339
L L D++ ++ T
Sbjct: 260 RYLHLAAKLLDAKEQAAT 277
Score = 41 (19.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 392 MKLSTPAIPEQCTELPPTPTPEQCPELSSPDV 423
+ LS A+PE ++ P+ P+ SP +
Sbjct: 162 LNLSDDALPEGFSQEFEEQQPKSRPKFQSPQI 193
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 226 (84.6 bits), Expect = 9.4e-29, Sum P(2) = 9.4e-29
Identities = 54/189 (28%), Positives = 97/189 (51%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V+ L+++L Q F G R +V++TN+AET +TIP + +V+DTGR K KY+ +
Sbjct: 900 VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + S ++SK C+R+Y+ F + D+S EI +VP++ +
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1018
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNG-RLTALGKAMAHYPM 615
L + N+ +F PP++ + A L+ + A + N LT LG+ +A P+
Sbjct: 1019 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPV 1078
Query: 616 SPRHSRMLL 624
+ + +ML+
Sbjct: 1079 NVKIGKMLI 1087
Score = 187 (70.9 bits), Expect = 9.4e-29, Sum P(2) = 9.4e-29
Identities = 44/125 (35%), Positives = 71/125 (56%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEA----GFGSNRCSSRSG 86
R+ LP+ I+E + + V++ GETG GK+TQVP FL E +G+++C+
Sbjct: 566 RQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN---- 621
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKE-----VGFQVRHDKKIGDSCSIKFMTDGIL 141
I TQPRR++ ++ A RV ELG G G+Q+R + + +S + + T G+L
Sbjct: 622 -IVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 142 LRELK 146
LR+L+
Sbjct: 681 LRKLQ 685
Score = 83 (34.3 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 34/125 (27%), Positives = 61/125 (48%)
Query: 118 GFQVRHDKKIGDSCSIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCI---- 162
G+Q+R + + +S + + T G+LLR+L+ + E ++ ++S +
Sbjct: 657 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILK 716
Query: 163 EPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIG 222
E + L LILMSAT+ E F + F + PI+ + R +PV V + +IV+ G
Sbjct: 717 EILQKRSDLHLILMSATVDSEKFST---YFTHCPILRISGRSYPVEVFHLE--DIVEETG 771
Query: 223 QAYKK 227
+K
Sbjct: 772 FVLEK 776
Score = 45 (20.9 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 265 LVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDD 324
L + +K+ + ++ E ++NMKE + Q E+ + S +E++FD +
Sbjct: 201 LQSKTKKQEDTKIKPKKEEK-NLEVNMKEWILRYAEQQNEEEKSENSKSLEEEEKFDPKE 259
Query: 325 NELDA---LSDSETESET 339
L L D++ ++ T
Sbjct: 260 RNLHLAAKLLDAKEQAAT 277
Score = 41 (19.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 392 MKLSTPAIPEQCTELPPTPTPEQCPELSSPDV 423
+ LS A+PE ++ P+ P+ SP +
Sbjct: 162 LNLSDDALPEGFSQEFEEQQPKSRPKFQSPQI 193
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 214 (80.4 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 51/189 (26%), Positives = 98/189 (51%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++ L+++L Q F G R +V++TN+AET +TIP + +V+D+GR K +Y+ +
Sbjct: 902 LIALHSVLSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHES 961
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + S E ++SK C+R+Y+ F + + ++S EI +VP++ +
Sbjct: 962 SQMSSLEETFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESFM-EYSVPEILRVPLEEL 1020
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNG-RLTALGKAMAHYPM 615
L + N+ +F PP+ + A L+ + A N +LT LG+ +A P+
Sbjct: 1021 CLHIMKCNLGSPEDFLSRALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPV 1080
Query: 616 SPRHSRMLL 624
+ + +ML+
Sbjct: 1081 NVKIGKMLI 1089
Score = 197 (74.4 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 47/133 (35%), Positives = 75/133 (56%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFE---AGFGS 78
SR + R++LP+ I+E + + V++ GETG GK+TQVP FL E G+
Sbjct: 562 SRYQKFLKERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGT 621
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLG---KE--VGFQVRHDKKIGDSCSI 133
+C+ I TQPRR++ ++ A RV ELG G K G+Q+R + + G++ +
Sbjct: 622 RKCN-----IVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRL 676
Query: 134 KFMTDGILLRELK 146
+ T G+LLR+L+
Sbjct: 677 LYCTTGVLLRKLQ 689
Score = 90 (36.7 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 118 GFQVRHDKKIGDSCSIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCI---- 162
G+Q+R + + G++ + + T G+LLR+L+ + E ++ + S +
Sbjct: 661 GYQIRMESRTGEATRLLYCTTGVLLRKLQEDGLLSSISHVIVDEVHERSVHSDFLLVILK 720
Query: 163 EPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTV-HFSKRTEIVDYI 221
E + L LILMSAT+ E F S F + PI+ + R +PV V H E Y+
Sbjct: 721 EILHKRSDLHLILMSATVDSEKFSS---YFAHCPILRISGRSYPVEVFHVEDVIEATGYV 777
Score = 77 (32.2 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 41/210 (19%), Positives = 84/210 (40%)
Query: 235 LPQGGILVFVTGQREVEY-LCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKE 293
LP+G F Q + CS + + + K+ N ++ K+++MKE
Sbjct: 177 LPEGFSQQFEEQQHKPRAKFCSPVSQREPPPRLADKKKKDNNPETKETNMKEQKEMSMKE 236
Query: 294 INEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNELD-ALSDSETESETEILGEDEKLVEQK 352
+ Q S E++ + DE++FD ++ + A SE + + I +D+ QK
Sbjct: 237 WILRYAEQ-QSDEEKNESVKETDEEKFDPNERYVHLAAKLSEAKEQASISKQDKDKQGQK 295
Query: 353 CPMDGDDPVDVLKENWSLGSLKLAFEVLSGKNASGPSSQMKLSTPAIPEQCT------EL 406
+ + +++ ++ F+ K ++ + K +TP P++ T E
Sbjct: 296 V---AQEKIRRIQQEMAMLEEHPVFDPAI-KTSNQQQKEKKKATPPQPQETTLNLSLLEK 351
Query: 407 PPTPTPEQCPELSSP-DVEKMGDNKRAGVG 435
P E+ + P D+ + R+ G
Sbjct: 352 PDGTAKEEKAKKKEPLDIRNFDYSARSWTG 381
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 232 (86.7 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 54/189 (28%), Positives = 99/189 (52%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V+ L+++L Q F +G R +V++TN+AET +TIP + +V+DTGR K KY+ +
Sbjct: 897 VIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 956
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + S ++SK C+R+Y+ F + D+S EI +VP++ +
Sbjct: 957 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEEL 1015
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNG-RLTALGKAMAHYPM 615
L + N+ +F PP++ + A L+ + A + N +LT LG+ +A P+
Sbjct: 1016 CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPV 1075
Query: 616 SPRHSRMLL 624
+ + +ML+
Sbjct: 1076 NVKIGKMLI 1084
Score = 187 (70.9 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 43/121 (35%), Positives = 67/121 (55%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP+ ++E + + V++ GETG GK+TQVP FL E N + I
Sbjct: 566 RQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLE-DLLLNEWGTTKCNIVC 624
Query: 91 TQPRRVAVLATAKRVAFELGLHLG---KE--VGFQVRHDKKIGDSCSIKFMTDGILLREL 145
TQPRR++ ++ A RV ELG G K G+Q+R + + +S + + T G+LLR+L
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 684
Query: 146 K 146
+
Sbjct: 685 Q 685
Score = 83 (34.3 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 118 GFQVRHDKKIGDSCSIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCI---- 162
G+Q+R + + +S + + T G+LLR+L+ + E ++ ++S +
Sbjct: 657 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILK 716
Query: 163 EPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIG 222
E + L LILMSAT+ E F + F + PI+ + R +PV V + +I++ G
Sbjct: 717 EILQKRSDLHLILMSATVDCEKFST---YFTHCPILRISGRSYPVEVFHLE--DIIEETG 771
Query: 223 QAYKK 227
+K
Sbjct: 772 FVLEK 776
Score = 45 (20.9 bits), Expect = 9.6e-14, Sum P(3) = 9.6e-14
Identities = 12/59 (20%), Positives = 30/59 (50%)
Query: 269 SKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFDIDDNEL 327
+K+ + + + + ++NMKE + Q E++++ S +E++FD ++ L
Sbjct: 205 TKKREEDPKIMPKKDEKKLEVNMKEWILRYAEQ--QNEEKSETSKSLEEEKFDPNERYL 261
Score = 38 (18.4 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 13/68 (19%), Positives = 35/68 (51%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELSK------SPVEFCNEYALHLKTMEEMSKL 752
K+ A L+ + + SD LT+ A ++ ++ S + +C + L+ ++ + +
Sbjct: 1115 KDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLEDV 1174
Query: 753 RKQLLHLL 760
+++L+ L+
Sbjct: 1175 KQELIKLV 1182
Score = 38 (18.4 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 252 YLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINMKEINE 296
+L +KL A +Q ++NK Q A + + + M+ + +
Sbjct: 262 HLAAKLLDAKEQAAAFKLEKNKQGQKEAQEKIRKFQRVEMETLED 306
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 344 (126.2 bits), Expect = 4.6e-28, P = 4.6e-28
Identities = 87/231 (37%), Positives = 132/231 (57%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ +SR G+IG
Sbjct: 472 RESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGY-----TSR-GKIGC 525
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 526 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 585
Query: 145 -----LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 586 LTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYEA 642
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
PI +P R +PV + ++K E DY+ + VM IH P G +V + G
Sbjct: 643 PIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGEWIVMIHG 692
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 217 (81.4 bits), Expect = 4.8e-28, Sum P(3) = 4.8e-28
Identities = 53/189 (28%), Positives = 97/189 (51%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
++ L+++L Q F G R +V++TN+AET +TIP + +V+DTGR K KY+ +
Sbjct: 900 LIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHES 959
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
+ + S ++SK C+RLY+ F L ++S EI +VP++ +
Sbjct: 960 SQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFL-EYSVPEILRVPLEEL 1018
Query: 559 VLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALD-SNGRLTALGKAMAHYPM 615
L + ++ +F PP+ + A L+ + A + S +LT LG+ +A P+
Sbjct: 1019 CLHIMKCDLGSPEDFLSKALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPV 1078
Query: 616 SPRHSRMLL 624
+ + +ML+
Sbjct: 1079 NVKIGKMLI 1087
Score = 200 (75.5 bits), Expect = 4.8e-28, Sum P(3) = 4.8e-28
Identities = 45/121 (37%), Positives = 68/121 (56%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP+ I+E + + V++ GETG GK+TQVP FL E N C +R I
Sbjct: 569 RQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLE-DLLLNDCGARKCNIVC 627
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKE-----VGFQVRHDKKIGDSCSIKFMTDGILLREL 145
TQPRR++ ++ A RV ELG G G+Q+R + + +S + + T G+LLR+L
Sbjct: 628 TQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 687
Query: 146 K 146
+
Sbjct: 688 Q 688
Score = 80 (33.2 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 118 GFQVRHDKKIGDSCSIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCI---- 162
G+Q+R + + +S + + T G+LLR+L+ + E ++ ++S +
Sbjct: 660 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILK 719
Query: 163 EPKDRVFPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTV-HFSKRTEIVDYI 221
E + L LILMSAT+ + F + F + PI+ + R +PV V H E +I
Sbjct: 720 EILQKRSDLHLILMSATVDSDKFST---YFTHCPILRISGRSYPVEVFHLEDIVEETGFI 776
Score = 52 (23.4 bits), Expect = 7.5e-13, Sum P(3) = 7.5e-13
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 265 LVNSSKENKGNQVVADSEPNATKDINMKEINEAFEIQGYSTEQQTDRFSSYDEDQFD 321
L +K + + + + + ++NMKE + Q E+ S DED+FD
Sbjct: 201 LQTKTKRQEEDPKIKPKKEEKSMEVNMKEWILRYAEQQNEEEKSEGSKGSEDEDKFD 257
Score = 38 (18.4 bits), Expect = 4.8e-28, Sum P(3) = 4.8e-28
Identities = 13/68 (19%), Positives = 34/68 (50%)
Query: 699 KEVAKLSHAKFSNPTSDVLTVAYALQCFELS------KSPVEFCNEYALHLKTMEEMSKL 752
K+ A L+ + + SD LT+ A ++ + +S + +C L+ ++ + +
Sbjct: 1118 KDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDV 1177
Query: 753 RKQLLHLL 760
+++L+ L+
Sbjct: 1178 KQELMKLV 1185
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 232 (86.7 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 61/190 (32%), Positives = 94/190 (49%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
V+PLY LP Q R V G R VV++T +AETSLTI G++ VVD G+ + +Y+ A
Sbjct: 244 VVPLYGDLPFVEQERAILPVP-GRRKVVLATTIAETSLTIEGVRVVVDGGQTRRLRYDPA 302
Query: 499 NGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNIL----PDFSCAEISKVP 554
+G+ + +S CYRL+ +L P+ A+++ +
Sbjct: 303 SGLNRLVTERVSAASATQRAGRAGRLGPGTCYRLWPEHDQQALLAADPPEILIADLAPLA 362
Query: 555 VDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYP 614
+D + + ++ + PP AL EA LK+L+ALD G +T G+ MA P
Sbjct: 363 LD-----LAHWGVSDPASLAWLDPPPRGALEEARNLLKSLDALDGQGMITETGRRMAELP 417
Query: 615 MSPRHSRMLL 624
+ PR + MLL
Sbjct: 418 LHPRLAHMLL 427
Score = 168 (64.2 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 60/241 (24%), Positives = 117/241 (48%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LP+ + +++ A+ +A ++ G GKTT+VP L +A + + + RI + +P
Sbjct: 4 LPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWLNGK------RIIMLEP 57
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA------ 147
RR+A A+ +A LG G VG+ +R D+++ ++ +T+GIL R L++
Sbjct: 58 RRLAATNAARWMARSLGEEAGATVGYAIRFDRRVSARTRVEVVTEGILTRRLQSDPLLEG 117
Query: 148 ----LYEK-QQQLLRS----GQCIEPKDRVFP-LKLILMSATLRVEDFISGGRLFRNPPI 197
++++ ++ + S C + + + L++I+MSAT+ + L + P+
Sbjct: 118 VGAVIFDEFHERSIHSDLALALCRDVQAGLREDLRIIVMSATMAAAPVAA---LLGDAPV 174
Query: 198 IEVPTRQFPVTV-HFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCSK 256
I R +PV + H + + A + + I R +G IL F+ G E+ C +
Sbjct: 175 ITSEGRNYPVALRHIPPNDR--ENLPSAVARAVRIAVRECEGDILAFLPGVGEIRR-CGQ 231
Query: 257 L 257
L
Sbjct: 232 L 232
>TIGR_CMR|SPO_0972 [details] [associations]
symbol:SPO_0972 "ATP-dependent helicase HrpB"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
RefSeq:YP_166224.1 ProteinModelPortal:Q5LUT1 GeneID:3192888
KEGG:sil:SPO0972 PATRIC:23375231 HOGENOM:HOG000244610
ProtClustDB:CLSK933398 Uniprot:Q5LUT1
Length = 816
Score = 231 (86.4 bits), Expect = 9.8e-28, Sum P(2) = 9.8e-28
Identities = 60/187 (32%), Positives = 92/187 (49%)
Query: 438 CVL-PLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
C L PL+ +P AAQ EG R VV++T++AETSLTIP ++ VVD G+ + +++
Sbjct: 244 CTLRPLFGAMPFAAQRAAIRPATEG-RNVVLATSIAETSLTIPDVRVVVDMGQARRARFD 302
Query: 497 SANGIESYEIQWISKXXXXXXXXXXXXXXXXHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+G+ + +++ CYRL++ L F AEI +
Sbjct: 303 PGSGMTRLVTERVTRAEATQRAGRAGRVAEGICYRLWTRGE-EGALAAFPPAEIEAADLT 361
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
G+ L + + + F T P TAL EA L L A+D+ GR+T G+ +A P+
Sbjct: 362 GLALELALWGAEPGA-LGFVTQPPETALAEARALLGFLGAIDAQGRITDHGRVLAALPLH 420
Query: 617 PRHSRML 623
PR ML
Sbjct: 421 PRLGHML 427
Score = 166 (63.5 bits), Expect = 9.8e-28, Sum P(2) = 9.8e-28
Identities = 66/238 (27%), Positives = 115/238 (48%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
LPI +++ A+ ++ G GKTT+VP L AG +N GRI + +P
Sbjct: 4 LPIDDALPDLISALRAQGRAVLQAPPGAGKTTRVPLALLSAGL-TN------GRIVMLEP 56
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA------ 147
RR+A A A+R+A LG +G+ VG+++R + K ++ I+ +T+GIL R L+A
Sbjct: 57 RRLAARAAAERMAETLGEPVGQTVGYRIRGEAKRTNATRIEVVTEGILTRMLQAEPDLPG 116
Query: 148 ----LYEK--QQQL---LRSGQCIEPKDRVFP-LKLILMSATLRVEDFISGGRLFRNPPI 197
++++ ++ L L C+E + + L L+ MSATL + + P+
Sbjct: 117 IGAVIFDEFHERSLNADLGLALCLEVTEALRDDLILLAMSATLDAGPVAA----LMDAPM 172
Query: 198 IEVPTRQFPVTVHF-----SKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREV 250
+ R +PV + R V+ + K + + L G +LVF+ G+ E+
Sbjct: 173 VTSQGRAYPVETRWLDHPLGPRARRVEALADLVAKAEAETRDLG-GSLLVFLPGEGEI 229
WARNING: HSPs involving 58 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 764 729 0.00086 121 3 11 22 0.43 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 308
No. of states in DFA: 617 (66 KB)
Total size of DFA: 346 KB (2174 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.89u 0.14s 78.03t Elapsed: 00:00:08
Total cpu time: 78.00u 0.14s 78.14t Elapsed: 00:00:08
Start: Mon May 20 17:26:49 2013 End: Mon May 20 17:26:57 2013
WARNINGS ISSUED: 2