BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038192
(764 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04217|DHR1_YEAST Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ECM16 PE=1 SV=1
Length = 1267
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 209/335 (62%), Gaps = 25/335 (7%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLPLY++LP Q+RVF+ +G RL +V+TNVAETSLTIPG++YVVD+GR K +KYN
Sbjct: 729 LYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYN 788
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+NG++S+E+ W+SKASA QR+GRAGRT PGHCYRLYSSAVF + FS EI ++PV+
Sbjct: 789 ESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVE 848
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
+VL MKSM I + NFPFPTPP+ AL +A + L+ L ALD+ +T GK M+ +P+S
Sbjct: 849 SIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPLS 908
Query: 617 PRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLE-GTQTNSN----- 670
PR S+MLL + L Y VA +ALSV +PF+ + E G S
Sbjct: 909 PRFSKMLLV----------SDEKACLPYIVAIVSALSVGDPFINEFELGINEISRKPNPD 958
Query: 671 ---DSELEERDNALDSEDPMCRQEKLGK--RKLKEVAKLSHAKFSNPTSDVLTVAYALQC 725
D ++ E D + DP ++E K + + +KL KFS+ +L+V A+
Sbjct: 959 ENLDDKIREHDESTPGMDPELKKELRSKFYKSRSQFSKLD--KFSD-VFRLLSVVSAMDY 1015
Query: 726 FELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+ + F + L K MEE+ KLRKQL++++
Sbjct: 1016 VPKEQKEI-FMKKNFLRGKLMEEIVKLRKQLMYII 1049
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 194/332 (58%), Gaps = 40/332 (12%)
Query: 19 VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGS 78
V VSR +E++ R LP+ E +IMEA++ N VIICGETG GKTTQVPQFL+EAGFG+
Sbjct: 376 VEVSRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGA 435
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTD 138
G +G+TQPRRVA ++ A+RVA ELG H G +VG+Q+R D + +KFMTD
Sbjct: 436 EDSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTD 494
Query: 139 GILLRELKALY-----------EKQQQLLRS-------GQCIEPKDRVFP--------LK 172
G+LLRE+ + E ++ + + +C+ + ++ LK
Sbjct: 495 GVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLK 554
Query: 173 LILMSATLRVEDFISGGRLFR-NPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSI 231
LI+MSATLRV DF LF PP+++V RQFPV++HF++RT +Y +A++K I
Sbjct: 555 LIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAF-NYTDEAFRKTCKI 613
Query: 232 HKRLPQGGILVFVTGQREVEYLCSKLRKASKQLLVNSSKENKGNQVVADSEPNATKDINM 291
H++LP G ILVF+TGQ+E+ ++ +LRK +SK NK + P + IN
Sbjct: 614 HQKLPPGAILVFLTGQQEITHMVKRLRKEFP--FKKNSKYNKDLET-----PVSKMGINS 666
Query: 292 KEIN-EAFEIQGYSTEQQTDRFSS---YDEDQ 319
K + EA +I D+F S Y+ED+
Sbjct: 667 KTTDLEAEDIDFSVQVIDQDKFKSAIRYEEDE 698
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAPB1A10.06c PE=3
SV=1
Length = 1183
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 202/324 (62%), Gaps = 11/324 (3%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
+ VLPLY++L Q++VF+ EG R+ +V+TNVAETS+TIP I+YVVD G+ K + YN
Sbjct: 702 MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYN 761
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
++ +E++WISKA+A QRAGRAGRT PGHCYRLYSSAVF++ P S EI + PV+
Sbjct: 762 EKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVE 821
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
+VL MK+MNID ++NFPFPT P + L ++ + L L A+DS G LT LG+ M+ +P+S
Sbjct: 822 SIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLS 881
Query: 617 PRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSELEE 676
PR S+ML+ + + L Y +A +ALS++ FV + + +++D
Sbjct: 882 PRFSKMLII----------GQQHGCLPYVIALVSALSINQLFVSK-QSLLYDAHDKNSRS 930
Query: 677 RDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFC 736
+ L +D + ++E+ R +S + +P + L++ A+ ++ + +FC
Sbjct: 931 EETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYDYASDKRKFC 990
Query: 737 NEYALHLKTMEEMSKLRKQLLHLL 760
E L K +EE++ LRKQ++ LL
Sbjct: 991 KENYLREKALEEVTNLRKQIIGLL 1014
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 164/265 (61%), Gaps = 29/265 (10%)
Query: 21 VSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNR 80
++RP E++ +R LPIV EQ IME + N VIICG TG GKTTQ+PQFLFEAGF S
Sbjct: 385 INRPPEIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPE 444
Query: 81 CSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGI 140
S G I +TQPRRVA ++ AKRV+ EL +V +Q+R D I +IKFMTDGI
Sbjct: 445 -SENPGMIAITQPRRVAAVSIAKRVSEELT-GFSSKVSYQIRFDSTINPDTAIKFMTDGI 502
Query: 141 LLRELKA--------------LYEKQ----------QQLLRSGQCIEPKD-RVFPLKLIL 175
LLREL + +E+ +++R + + D +V PLKLI+
Sbjct: 503 LLRELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLII 562
Query: 176 MSATLRVEDFISGGRLFR-NPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKR 234
MSATLRV DF LF PPII++ RQ+PV++HF+ RT DY+ A+ KV IHKR
Sbjct: 563 MSATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFN-RTTKPDYLQDAFDKVCLIHKR 621
Query: 235 LPQGGILVFVTGQREVEYLCSKLRK 259
LP G ILVF+TGQ+EVE LC LRK
Sbjct: 622 LPAGSILVFLTGQQEVEQLCQMLRK 646
>sp|Q8IY37|DHX37_HUMAN Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens GN=DHX37
PE=1 SV=1
Length = 1157
Score = 234 bits (596), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 173/264 (65%), Gaps = 26/264 (9%)
Query: 17 IVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGF 76
+ + V+R E++ R LPI+ EQ IMEAV ++ VI+CGETG GKTTQVPQFL+EAGF
Sbjct: 235 VFIPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGF 294
Query: 77 GSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFM 136
SS IGVT+PRRVA +A ++RVA E+ L + V +Q+R++ + + IKFM
Sbjct: 295 -----SSEDSIIGVTEPRRVAAVAMSQRVAKEMNLS-QRVVSYQIRYEGNVTEETRIKFM 348
Query: 137 TDGILLRELKALY-----------EKQQQLLRSGQCIEPKDRV--------FPLKLILMS 177
TDG+LL+E++ + E ++ + + I R+ PLKL++MS
Sbjct: 349 TDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMS 408
Query: 178 ATLRVEDFISGGRLF-RNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLP 236
ATLRVEDF RLF + PP+I+V +RQFPVTVHF+KRT + DY G+ ++KV IH+ LP
Sbjct: 409 ATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLP 468
Query: 237 QGGILVFVTGQREVEYLCSKLRKA 260
GGILVF+TGQ EV LC +LRKA
Sbjct: 469 AGGILVFLTGQAEVHALCRRLRKA 492
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 189/340 (55%), Gaps = 52/340 (15%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLPLY++L Q +VF+ EG RL VV+TNVAETSLTIPGIKYVVD G+ K + Y+
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ S+ + W+S+ASA QRAGRAGRT PGHCYRLYSSAVF + F EI++ PV+
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGD-FEQFPPPEITRRPVE 706
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALV----------------EAERCLKALEALDSN 600
++L MK++N++KV NFPFPTPP V AL+ +AER +K L+ +
Sbjct: 707 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAER-VKQLQENRLS 765
Query: 601 GRLTALGKAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVL 660
+TALG+ MA +P++PR+++ML + +R + L Y + A+++V F
Sbjct: 766 CPITALGRTMATFPVAPRYAKML----------ALSRQHGCLPYAITIVASMTVRELF-- 813
Query: 661 QLEGTQTNSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTS----DV 716
EE D S++ + R K K VA++ S D+
Sbjct: 814 --------------EELDRPAASDEELTRL----KSKRARVAQMKRTWAGQGASLKLGDL 855
Query: 717 LTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
+ + A+ E + +FC L K M E+ +LR QL
Sbjct: 856 MVLLGAVGACEYASCTPQFCEANGLRYKAMMEIRRLRGQL 895
>sp|O46072|KZ_DROME Probable ATP-dependent RNA helicase kurz OS=Drosophila melanogaster
GN=kz PE=1 SV=1
Length = 1192
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/263 (46%), Positives = 168/263 (63%), Gaps = 28/263 (10%)
Query: 17 IVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGF 76
+ V V R EV+N R LPI+ EQ++ME +N+N VI+ GETG GKTTQ+PQFL+EAG+
Sbjct: 243 VYVPVHRTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGY 302
Query: 77 GSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFM 136
++ IGVT+PRRVA +A +KRVA E+ L EV + +R + + + IKFM
Sbjct: 303 AQHKM------IGVTEPRRVAAIAMSKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKFM 355
Query: 137 TDGILLRELKA-----------LYEKQQQLLRSGQCIEPKDRVF--------PLKLILMS 177
TDG+LL+E++ L E ++ + + + R+ PLKLI+MS
Sbjct: 356 TDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMS 415
Query: 178 ATLRVEDFISGGRLFR-NPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLP 236
ATLRV DF RLF+ PP+++V RQFPVT+HF KRT DY+ +AY+K + IH +LP
Sbjct: 416 ATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPD-DYVAEAYRKTLKIHNKLP 474
Query: 237 QGGILVFVTGQREVEYLCSKLRK 259
+GGIL+FVTGQ+EV L KLR+
Sbjct: 475 EGGILIFVTGQQEVNQLVRKLRR 497
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 185/348 (53%), Gaps = 39/348 (11%)
Query: 417 ELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSL 476
EL D MG +R L VLPLY++L + Q R+F V +G RL VVSTNVAETSL
Sbjct: 600 ELGLEDESGMGSGQRQ---PLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSL 656
Query: 477 TIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSA 536
TIP IKYVVD GR+K + Y+ G+ ++ + + SKASA QRAGRAGR + GHCYRLYSSA
Sbjct: 657 TIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSA 716
Query: 537 VFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEA 596
V+N+ DFS +I K PV+ ++L M+ M ID+V +FPFP+PP+ L AER L L A
Sbjct: 717 VYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGA 776
Query: 597 L--------DSNGRLTALGKAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAA 648
L D +T LG ++ +P++PR +ML + + +L Y V
Sbjct: 777 LEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKML----------ALSHQQNLLPYTVCL 826
Query: 649 AAALSVSNPFVLQLEGTQTNSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAK 708
AALSV VL G Q RD ED + +++ A ++
Sbjct: 827 VAALSVQE--VLIETGVQ----------RD-----EDVAPGANRFHRKRQSWAASGNYQL 869
Query: 709 FSNPTSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
+P + V A + P EFC L K M E+ KLR QL
Sbjct: 870 LGDPMVLLRAVGAAEYAGSQGRLP-EFCAANGLRQKAMSEVRKLRVQL 916
>sp|P34305|RHA2_CAEEL Putative ATP-dependent RNA helicase rha-2 OS=Caenorhabditis elegans
GN=rha-2 PE=3 SV=2
Length = 1148
Score = 205 bits (522), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 181/308 (58%), Gaps = 45/308 (14%)
Query: 19 VHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGS 78
V V R E++ +R +LPI E I+EA+N+N ++CGETG GKTTQ+PQFL+EAG+
Sbjct: 221 VIVERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGY-- 278
Query: 79 NRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTD 138
+S IG+T+PRRVA +A A+RV EL EV +Q+R++ ++ +I FMTD
Sbjct: 279 ---ASEGELIGITEPRRVAAIAMAQRVGVELA--KPDEVSYQIRYEGTRSETTNILFMTD 333
Query: 139 GILLRELKA-----------LYEKQQQLLRSGQCIEPKDRVF--------PLKLILMSAT 179
G+L++E++ + E ++ + S I R+ PL+L++MSAT
Sbjct: 334 GVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSAT 393
Query: 180 LRVEDFISGGRLF--RNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQ 237
LR++DF + +LF P +I+V RQFPV+VHF KRT DYI A++K IH+ LP
Sbjct: 394 LRLDDF-THKKLFPLLTPKVIKVDARQFPVSVHFEKRTPD-DYIASAFRKTCRIHETLPP 451
Query: 238 GGILVFVTGQREVEYLCSKLRK---------ASKQLLVNSSKENKGNQVVADSEPNATKD 288
G ILVFVTGQ EV+ L +KL+K + ++LV +KE K +V A K
Sbjct: 452 GAILVFVTGQHEVKQLITKLKKRYPVVYETDKNGEVLVKGTKEWKEKKV------EAAKS 505
Query: 289 INMKEINE 296
I +++ E
Sbjct: 506 IKLEDFKE 513
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 179/331 (54%), Gaps = 36/331 (10%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L LPLY++L Q RVF++ G RL V+STNVAETSLTIPG+KYV+D G EK + Y+
Sbjct: 575 LYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYD 634
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
S G+ + + IS+AS QRAGRAGR + GH YRLYSSAV+ + + F+ EI P D
Sbjct: 635 SITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVYQDFV-KFADPEILSKPAD 693
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALD-------SNGRLTALGKA 609
+VL +KSMNI KV NFPFP+ P+ L AE+ L L AL + R+T LGK
Sbjct: 694 QLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKT 753
Query: 610 MAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNS 669
+A +P++P +++ + + A + ++ + + + LSV P + + + ++
Sbjct: 754 LAVFPLAPSYAKFI----------AMADQHNLMSHAILLISLLSVREPLI-PVSSLRGDT 802
Query: 670 NDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELS 729
+ E N L C G R+L ++ L HA +VA E
Sbjct: 803 PEETKELMKNVLKERRRWCSH--TGARRLGDLKVLMHAA---------SVA------EQI 845
Query: 730 KSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
K C + L +K + E KLR+QL +++
Sbjct: 846 KYNARECEKVGLRVKALVEARKLRQQLTNIV 876
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 168/332 (50%), Gaps = 50/332 (15%)
Query: 432 AGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREK 491
+ V L +LP+Y+ LP+ Q ++FE G R VV++TN+AETSLTI GI YV+D G K
Sbjct: 745 SNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSK 804
Query: 492 VKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEIS 551
K +N NG++S + IS+A+A QR+GRAGRT PG CYRLY+ + F N + S EI
Sbjct: 805 QKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQ 864
Query: 552 KVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMA 611
+ + VL MK+M I+ + NF F PP V LV A L +L ALD G LT LG+ MA
Sbjct: 865 RTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMA 924
Query: 612 HYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYG---VAAAAALSVSNPFVLQLEGTQTN 668
+P+ P+ S+ML+ A++ LG + A LSV N F E
Sbjct: 925 EFPLDPQLSKMLI-------------ASVDLGCSDEILTVVAMLSVQNVFYRPKEK---- 967
Query: 669 SNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFEL 728
+ +A AKF P D LT+ + ++
Sbjct: 968 ------------------------------QALADQKKAKFFQPEGDHLTLLNVYESWKN 997
Query: 729 SKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
SK +C E + +++ +RKQL+ ++
Sbjct: 998 SKFSNPWCFENFVQARSLRRAQDVRKQLITIM 1029
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 144/256 (56%), Gaps = 25/256 (9%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LPI + + ++AV+++ +++ GETG GKTTQ+ Q+L EAG+G+ G
Sbjct: 501 IKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTR------G 554
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-- 144
+IG TQPRRVA ++ +KRVA E G LG+EVG+ +R + IKFMTDGILLRE
Sbjct: 555 KIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECL 614
Query: 145 ----LKA-----LYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRL 191
L A L E ++ + + G + R LK+++ SATL E F +
Sbjct: 615 LDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKF---SKY 671
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F N + +P R FPV + ++K E DY+ + VM IH P G IL+F+TGQ E++
Sbjct: 672 FMNAQLFIIPGRTFPVDIRYTKDPE-ADYLDASLITVMQIHLSEPPGDILLFLTGQEEID 730
Query: 252 YLCSKLRKASKQLLVN 267
C L + K L N
Sbjct: 731 AACQILYERMKSLGSN 746
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 162/327 (49%), Gaps = 44/327 (13%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G+R VVV+TN+AE SLTI GI YVVD G K
Sbjct: 754 VPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQN 813
Query: 494 KYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKV 553
YN G+ES I IS+ASA QRAGRAGRT PG CYRLY+ + + N +P S EI ++
Sbjct: 814 VYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRI 873
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ L MK+M I+ + +F F PP+ AL+ A L +L ALD G LT LG+ MA +
Sbjct: 874 NLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEF 933
Query: 614 PMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSE 673
P+ P S+MLL A+ L S+ + + QT +
Sbjct: 934 PLEPPLSKMLL-----------------------ASVDLGCSDEILTMIAMIQTGNIFYR 970
Query: 674 LEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPV 733
E+ D + AKF P D LT+ + ++
Sbjct: 971 PREKQAQADQK---------------------RAKFFQPEGDHLTLLAVYEAWKAKNFSG 1009
Query: 734 EFCNEYALHLKTMEEMSKLRKQLLHLL 760
+C E + +++ +RKQLL ++
Sbjct: 1010 PWCFENFIQSRSLRRAQDVRKQLLSIM 1036
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 149/256 (58%), Gaps = 25/256 (9%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LPI +++E+++AV+DN +++ GETG GKTTQV Q+L EAG+ + G
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTK------G 561
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
+IG TQPRRVA ++ AKRVA E G LG+EVG+ +R + G IK+MTDG+LLRE+
Sbjct: 562 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 621
Query: 147 -----------ALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRL 191
L E ++ + + G + R L+LI+ SATL E F SG
Sbjct: 622 IDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKF-SG--Y 678
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F N I +P R FPV + ++K+ E DY+ A V+ IH P+G ILVF+TGQ E++
Sbjct: 679 FFNCNIFTIPGRTFPVEILYTKQPE-TDYLDAALITVLQIHLTEPEGDILVFLTGQEEID 737
Query: 252 YLCSKLRKASKQLLVN 267
C L + K L N
Sbjct: 738 SACQSLYERMKGLGKN 753
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 171/327 (52%), Gaps = 50/327 (15%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP+Y+ LP+ Q R+FE G R VV++TN+AETSLTI GI YVVD G K ++
Sbjct: 753 LVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFD 812
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G++S + IS+A A QR+GRAGRT PG CYRLY+ + + N + EI + +
Sbjct: 813 PKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLS 872
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
+L++K+M I+ + NF F PP ++ A + L AL ALD G LT LG+ MA +PM
Sbjct: 873 HTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPME 932
Query: 617 PRHSRMLLTLIQTMKVKSYARANLVLGYG---VAAAAALSVSNPFVLQLEGTQTNSNDSE 673
P+ S++L+T ++ LG ++ A LSV N +
Sbjct: 933 PQLSKVLITSVE-------------LGCSEEMLSIIAMLSVPNIW--------------- 964
Query: 674 LEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPV 733
P +Q++ +++ A+F+NP SD LT+ +++++
Sbjct: 965 ----------SRPREKQQEADRQR---------AQFANPESDHLTLLNVYTTWKMNRCSD 1005
Query: 734 EFCNEYALHLKTMEEMSKLRKQLLHLL 760
+C E+ + + M +RKQL+ L+
Sbjct: 1006 NWCYEHYIQARGMRRAEDVRKQLIRLM 1032
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 149/279 (53%), Gaps = 24/279 (8%)
Query: 1 MTGNLPSSLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETG 60
+T PS Q A I ++ R+ LP+ + ++ +EAV+ N +++ GETG
Sbjct: 477 LTSETPSWRQATRNANISYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETG 536
Query: 61 CGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQ 120
GKTTQ+ Q+L E G+ S+ S IG TQPRRVA ++ AKRVA E+G +G+EVG+
Sbjct: 537 SGKTTQITQYLAEEGYTSD-----SKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYT 591
Query: 121 VRHDKKIGDSCSIKFMTDGILLRE--LKALYEKQQQLL--RSGQCIEPKDRVF------- 169
+R + K IK+MTDG+L RE + L K ++ + + D +F
Sbjct: 592 IRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTV 651
Query: 170 ----PLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAY 225
LKLI+ SATL E F S F PI +P R +PV + ++K+ E DY+ A
Sbjct: 652 LKRPDLKLIVTSATLDAERFSS---YFYKCPIFTIPGRSYPVEIMYTKQPE-ADYLDAAL 707
Query: 226 KKVMSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
VM IH G ILVF+TGQ E++ C L + SK L
Sbjct: 708 MTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKML 746
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 170/344 (49%), Gaps = 48/344 (13%)
Query: 413 EQCPELSSPDVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVA 472
+ C E+ V+ +GD+ +G L +LP+Y+ LP+ Q ++FE +G R VV +TN+A
Sbjct: 705 DSCCEILYDRVKTLGDS----IGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIA 760
Query: 473 ETSLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRL 532
ETS+TI GI YVVD G K+ YN+ GIE + IS+A A QR GRAGRT PG CYRL
Sbjct: 761 ETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRL 820
Query: 533 YSSAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLK 592
Y+ + F N + + + EI + + +L++K+M I+ + F F PP ++ A L
Sbjct: 821 YTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELY 880
Query: 593 ALEALDSNGRLTALGKAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAAL 652
L++LD G+LT LGK M+ +PM P SR LL+ + N V + L
Sbjct: 881 HLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVD----------NQCSDEIVTIISML 930
Query: 653 SVSNPFVLQLEGTQTNSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNP 712
SV N F P RQ + +K AKF +P
Sbjct: 931 SVQNVFY-------------------------RPKDRQLEADSKK---------AKFHHP 956
Query: 713 TSDVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
D LT+ ++ + ++C LH + ++ ++ Q+
Sbjct: 957 YGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQI 1000
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 135/254 (53%), Gaps = 35/254 (13%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP+ M E+++AV DN ++I GETG GKTTQ+ Q+L E GF S G IG
Sbjct: 480 RQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGF------SNYGMIGC 533
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE------ 144
TQPRRVA ++ AKRVA E+G +G +VG+ +R + G IK+MTDG+L RE
Sbjct: 534 TQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPE 593
Query: 145 --------LKALYEKQQ------QLLRSGQCIEPKDRVFPLKLILMSATLRVEDFISGGR 190
L +E+ LL+ P+ LK+I+ SATL F
Sbjct: 594 MSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPE-----LKVIVTSATLNSAKF---SE 645
Query: 191 LFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREV 250
F N PII +P + FPV V +S+ T +DYI A V+ IH G ILVF+TGQ E+
Sbjct: 646 YFLNCPIINIPGKTFPVEVLYSQ-TPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEI 704
Query: 251 EYLCSKLRKASKQL 264
+ C L K L
Sbjct: 705 DSCCEILYDRVKTL 718
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 173/327 (52%), Gaps = 44/327 (13%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L +LP+Y+ +PA Q ++F+ + G R VVV+TN+AETSLT+ GI YVVDTG K+K YN
Sbjct: 733 LSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYN 792
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
S GI++ ++ IS+A+A QRAGRAGRT PG YRLY+ + + + + EI + +
Sbjct: 793 SKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLS 852
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VL++KS+ ++++S+F F P L+ + L L ALD+ G+LT LGK M+ +PM
Sbjct: 853 NTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMD 912
Query: 617 PRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSELEE 676
P S++++ + Y + + + LSV + F E EE
Sbjct: 913 PSLSKLIII------AEDYKCTEEI----ITIVSMLSVPSVFYRPKE---------RAEE 953
Query: 677 RDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFC 736
D A + KF+ P SD L + Q ++ + +C
Sbjct: 954 SDAARE-------------------------KFNVPESDHLMLLNIYQHWQRNGYSNSWC 988
Query: 737 NEYALHLKTMEEMSKLRKQLLHLLFNQ 763
+++ LH KT++ +R+QL+ ++ Q
Sbjct: 989 SKHFLHSKTLKRARDIRQQLVEIMSKQ 1015
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 135/248 (54%), Gaps = 25/248 (10%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
+R R+ LP + ++++ + DN +I+ GETG GKTTQ+ QFL+E G+
Sbjct: 480 ARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGY----- 534
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
R+G IG TQPRRVA ++ AKRV+ E+G+ LG VG+ +R + G IK+MTDG+L
Sbjct: 535 -HRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVL 593
Query: 142 LRE-----------LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE + + E ++ L + G + R +KL++ SAT+ + F
Sbjct: 594 LRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKF- 652
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
F P +P R +PV + F+K DY+ A ++V+ IH P G ILVF+TG
Sbjct: 653 --SDFFGGAPQFTIPGRTYPVDIMFAK-APCSDYVEAAVRQVLQIHLSQPAGDILVFMTG 709
Query: 247 QREVEYLC 254
Q ++E C
Sbjct: 710 QEDIEATC 717
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 164/330 (49%), Gaps = 50/330 (15%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y LP+ Q R+F+ G+R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 779 VPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQK 838
Query: 494 KYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKV 553
YN +G++S + IS+A+A QR+GRAGRT PG CYRLY+ F + + EI +
Sbjct: 839 IYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRT 898
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ +L +K+M I+ + +F F P + +++ A L L ALD +G LT LG+ MA +
Sbjct: 899 NLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEF 958
Query: 614 PMSPRHSRMLLTLIQTMKVKSYARANLVLGYG---VAAAAALSVSNPFVLQLEGTQTNSN 670
P+ P S++L+ + LG + A L+V N F
Sbjct: 959 PLEPSLSKLLIMSVD-------------LGCSEEVLTIVAMLNVQNIFY----------- 994
Query: 671 DSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSK 730
P +Q+ ++K AKF P D LT+ ++
Sbjct: 995 --------------RPKEKQDHADQKK---------AKFHQPEGDHLTLLAVYNSWKNHH 1031
Query: 731 SPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+C E + +++M+ +RKQLL ++
Sbjct: 1032 FSQPWCFENFIQVRSMKRAQDIRKQLLGIM 1061
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 148/276 (53%), Gaps = 26/276 (9%)
Query: 5 LPSSLQRPLAAPIVVHVSRPN-EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGK 63
+P L+ A + R N + R+ LPI +++ +MEA+ DN +++ GETG GK
Sbjct: 510 MPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGK 569
Query: 64 TTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRH 123
TTQ+ Q+ EAG G R G+IG TQPRRVA ++ AKRVA E G LG +VG+ +R
Sbjct: 570 TTQMTQYAIEAGLG------RRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRF 623
Query: 124 DKKIGDSCSIKFMTDGILLRE-----------LKALYEKQQQLLRSG---QCIEPKDRVF 169
+ IK+MTDG+LLRE L L E ++ + + ++ R
Sbjct: 624 EDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
Query: 170 P-LKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKV 228
P LKLI+ SATL D + F PI +P R FPV + +++ E DY+ A+ V
Sbjct: 684 PELKLIITSATL---DSVKFSEYFLEAPIFTIPGRTFPVEILYTREPE-SDYLEAAHITV 739
Query: 229 MSIHKRLPQGGILVFVTGQREVEYLCSKLRKASKQL 264
M IH P G +LVF+TGQ E++ C L + K +
Sbjct: 740 MQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSM 775
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 121/191 (63%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
+ L + +Y+ LP Q ++FE R VV++TN+AETSLTI GI YV+D G K K
Sbjct: 706 IKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQK 765
Query: 494 KYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKV 553
+N G+ES I +S+ASA QR GRAGR APG C+RL+++ F+N L + + EI +
Sbjct: 766 MFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRT 825
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VVLL+KSM I+ + NF F PP L+ A L AL AL+ G+LT LG+ MA +
Sbjct: 826 NLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLGRKMAEF 885
Query: 614 PMSPRHSRMLL 624
P+ P+ S+M++
Sbjct: 886 PVDPQLSKMII 896
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 141/253 (55%), Gaps = 25/253 (9%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ RK LP+ +++++AV + +II GETG GKTTQ+PQ+L EAGF S++G
Sbjct: 460 IQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGF------SKTG 513
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
+IG TQPRRVA ++ A RVA E+G LG EVG+ +R + +++MTDG+L+RE
Sbjct: 514 KIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFL 573
Query: 147 A-----------LYEKQQQLLRSG---QCIEPKDRVFP-LKLILMSATLRVEDFISGGRL 191
+ E ++ L + ++ R P LKL++ SAT+ E F
Sbjct: 574 TAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERF---SDY 630
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F P +P R++ VT H+++ E DY+ A V+ IH P G ILVF+TGQ EV+
Sbjct: 631 FDGAPTFNIPGRKYEVTTHYTQAPE-ADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVD 689
Query: 252 YLCSKLRKASKQL 264
L+ ++ L
Sbjct: 690 QAAEMLQTRTRGL 702
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 172/346 (49%), Gaps = 55/346 (15%)
Query: 422 DVEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFE----DVKEG---ERLVVVSTNVAET 474
+V +GD VG + V+PLY+ LP A Q ++F+ + EG R +VVSTN+AET
Sbjct: 302 EVSNLGDQ----VGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAET 357
Query: 475 SLTIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYS 534
SLTI GI YV+D G K K YN +ES + ISKASA QR+GRAGRT PG C+RLY+
Sbjct: 358 SLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYT 417
Query: 535 SAVFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKAL 594
FNN L + EI + + VL +K + ID + +F F PP L+ A L L
Sbjct: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 477
Query: 595 EALDSNGRLTALGKAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSV 654
ALD G LT G+ M+ +P+ P+ S+ML+ + +N +L + +A LSV
Sbjct: 478 GALDDEGNLTKTGEIMSEFPLDPQMSKMLIV------SPEFNCSNEIL----SVSAMLSV 527
Query: 655 SNPFVLQLEGTQTNSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTS 714
N FV R+ ++ A + A+F +
Sbjct: 528 PNCFV----------------------------------RPREAQKAADEAKARFGHIDG 553
Query: 715 DVLTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
D LT+ ++ + +C E ++ + M+ +R+QL+ ++
Sbjct: 554 DHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIM 599
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 143/254 (56%), Gaps = 19/254 (7%)
Query: 26 EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRS 85
E+ R+DLP+ + + + + +N N +I+ GETG GKTTQ+PQF+ +A N R
Sbjct: 57 EILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRK 116
Query: 86 GRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
+G TQPRRVA ++ ++RVA E+ + +G+EVG+ +R + +K++TDG+LLRE
Sbjct: 117 WLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREA 176
Query: 146 KA--LYEKQQQLL--RSGQCIEPKDRVF-----------PLKLILMSATLRVEDFISGGR 190
A L E+ + ++ + + D +F LKL++MSATL E F
Sbjct: 177 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKF---QE 233
Query: 191 LFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREV 250
F P+++VP R PV + +++ E DY+ A + V+ IH P G ILVF+TG+ E+
Sbjct: 234 YFSGAPLMKVPGRLHPVEIFYTQEPE-RDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEI 292
Query: 251 EYLCSKLRKASKQL 264
E C K+ K L
Sbjct: 293 EDACRKINKEVSNL 306
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 142/254 (55%), Gaps = 25/254 (9%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+E RK LP+ +EAV ++ +II GETG GKTTQ+PQ+L+EAGF C
Sbjct: 357 IEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGF----CEG-GK 411
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-- 144
RIG TQPRRVA ++ A RVA E+G LG +VG+ +R + + +K+MTDG+LLRE
Sbjct: 412 RIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFL 471
Query: 145 ---------LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRL 191
+ + E ++ L + G + LKL++ SATL E F S
Sbjct: 472 NEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSS---F 528
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLP-QGGILVFVTGQREV 250
F + PI +P R+FPV +++++ E DY+ A +M IH P G ILVF+TGQ E+
Sbjct: 529 FDDAPIFRIPGRRFPVDIYYTQAPE-ADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEI 587
Query: 251 EYLCSKLRKASKQL 264
E + L + SK L
Sbjct: 588 ETVQEALMERSKAL 601
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 155/327 (47%), Gaps = 43/327 (13%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
+ L LP+YA LP+ Q ++FE + R VV++TN+AETS+TI GI YV+D G K
Sbjct: 605 IKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQN 664
Query: 494 KYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKV 553
+++ +G+E + ISKA+A QRAGRAGRT PG C+RLY++ + + L + EI +
Sbjct: 665 SFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRT 724
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VVL++KS+ I + +F F PP LV A L AL AL+ G LT LG+ MA +
Sbjct: 725 NLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEF 784
Query: 614 PMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSE 673
P P S+M++ A + AA+ N V Q DS
Sbjct: 785 PCDPCMSKMII-----------ASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADS- 832
Query: 674 LEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPV 733
+ F +P D +T+ ++ S
Sbjct: 833 -------------------------------ARKGFWSPAGDHITLMNVYNKWQESSFSQ 861
Query: 734 EFCNEYALHLKTMEEMSKLRKQLLHLL 760
+C E + +TM+ +R QL+ LL
Sbjct: 862 RWCVENYVQHRTMKRARDVRDQLVGLL 888
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 158/330 (47%), Gaps = 50/330 (15%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 804 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 863
Query: 494 KYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+A A QRAGRAGRT PG CYRLY+ + + + + EI +
Sbjct: 864 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 923
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 924 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 983
Query: 614 PMSPRHSRMLLTLIQTMKVKSYARANLVLGYG---VAAAAALSVSNPFVLQLEGTQTNSN 670
P+ P +ML+ + LG + + LSV N F
Sbjct: 984 PLEPMLCKMLIMSVH-------------LGCSEEMLTIVSMLSVQNVFY----------- 1019
Query: 671 DSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSK 730
P +Q ++K AKF D LT+ ++ +K
Sbjct: 1020 --------------RPKDKQALADQKK---------AKFHQTEGDHLTLLAVYNSWKNNK 1056
Query: 731 SPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+C E + +++ +RKQ+L ++
Sbjct: 1057 FSNPWCYENFIQARSLRRAQDIRKQMLGIM 1086
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 142/250 (56%), Gaps = 25/250 (10%)
Query: 30 NRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIG 89
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ S G+IG
Sbjct: 561 QRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR------GKIG 614
Query: 90 VTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE----- 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 615 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 674
Query: 145 ------LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRN 194
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 675 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYE 731
Query: 195 PPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLC 254
PI +P R +PV + ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 732 APIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 790
Query: 255 SKLRKASKQL 264
L + K L
Sbjct: 791 EILYERMKSL 800
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 171/344 (49%), Gaps = 50/344 (14%)
Query: 423 VEKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGE------RLVVVSTNVAETSL 476
+++ DN VG L +PLY+ LP A Q R+FE + R VVVSTN+AETSL
Sbjct: 137 IKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPPNKANGAIGRKVVVSTNIAETSL 196
Query: 477 TIPGIKYVVDTGREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSA 536
TI G+ +V+D G K K YN +ES + ISKASA QR GRAGRT PG C+RLY+
Sbjct: 197 TIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRVGRAGRTRPGKCFRLYTEK 256
Query: 537 VFNNILPDFSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEA 596
+++ + D + EI + + VVL +K + ID + +F F PP L+ A L L A
Sbjct: 257 AYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGA 316
Query: 597 LDSNGRLTALGKAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSN 656
LD +G LT LG MA +P+ P+ ++M++ Y+ +N +L + A LSV
Sbjct: 317 LDDSGDLTRLGSMMAEFPLDPQLAKMVIA------STDYSCSNEIL----SVTAMLSV-- 364
Query: 657 PFVLQLEGTQTNSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDV 716
P C +KL + AK+ +F++ D
Sbjct: 365 -----------------------------PQCFLRPNEAKKLADEAKM---RFAHIDGDH 392
Query: 717 LTVAYALQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
LT+ F+ + ++C + + ++++ +R+QL ++
Sbjct: 393 LTLLNVYHAFKQNNEDPQWCYDNFIQYRSLKSADSVRQQLARIM 436
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 20/148 (13%)
Query: 133 IKFMTDGILLRE--LKALYEKQQQLLRS-------------GQCIEPKDRVFPLKLILMS 177
IK+MTDG+LLRE L E+ +L G E + + LKL++MS
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMS 60
Query: 178 ATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLP 236
ATL F F N P++ VP R PV + ++ E DY+ A + V+ IH
Sbjct: 61 ATLDAGKF---QHYFDNAPLMTVPGRTHPVEIFYTPEPE-RDYLEAAIRTVVQIHMCEEV 116
Query: 237 QGGILVFVTGQREVEYLCSKLRKASKQL 264
+G +L+F+TGQ E+E C ++++ L
Sbjct: 117 EGDVLLFLTGQEEIEEACKRIKREVDNL 144
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 158/330 (47%), Gaps = 50/330 (15%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
V L +LP+Y+ LP+ Q R+F+ G R VV++TN+AETSLTI GI YVVD G K K
Sbjct: 828 VPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQK 887
Query: 494 KYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKV 553
YNS GI+ + IS+A A QRAGRAGRT PG CYRLY+ + + + + EI +
Sbjct: 888 VYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRT 947
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VL +K+M I+ + +F F P + L+ A L L ALD G LT LG+ MA +
Sbjct: 948 NLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEF 1007
Query: 614 PMSPRHSRMLLTLIQTMKVKSYARANLVLGYG---VAAAAALSVSNPFVLQLEGTQTNSN 670
P+ P +ML+ + LG + + LSV N F
Sbjct: 1008 PLEPMLCKMLIMSVH-------------LGCSEEMLTIVSMLSVQNVFY----------- 1043
Query: 671 DSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSK 730
P +Q ++K AKF D LT+ ++ +K
Sbjct: 1044 --------------RPKDKQALADQKK---------AKFHQTEGDHLTLLAVYNSWKNNK 1080
Query: 731 SPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
+C E + +++ +RKQ+L ++
Sbjct: 1081 FSNPWCYENFIQARSLRRAQDIRKQMLGIM 1110
Score = 162 bits (411), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 142/250 (56%), Gaps = 25/250 (10%)
Query: 30 NRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIG 89
R+ LPI +++++++AV+DN +I+ GETG GKTTQ+ Q+L EAG+ S G+IG
Sbjct: 585 QRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSR------GKIG 638
Query: 90 VTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE----- 144
TQPRRVA ++ AKRV+ E G LG+EVG+ +R + IK+MTDG+LLRE
Sbjct: 639 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 698
Query: 145 ------LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRN 194
+ L E ++ + + G + + +KLI+ SATL D + + F
Sbjct: 699 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL---DAVKFSQYFYE 755
Query: 195 PPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLC 254
PI +P R +PV + ++K E DY+ + VM IH P G ILVF+TGQ E++ C
Sbjct: 756 APIFTIPGRTYPVEILYTKEPE-TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC 814
Query: 255 SKLRKASKQL 264
L + K L
Sbjct: 815 EILYERMKSL 824
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 130/220 (59%), Gaps = 10/220 (4%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLP+YA LP+ Q R+F+ G R VVV+TN+AETSLTI GI YV+D G K K YN
Sbjct: 646 LLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYN 705
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ES + SKASA QRAGRAGR A G C+RLY++ + + L + + EI + +
Sbjct: 706 PRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLG 765
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVLL+KS+ I + +F F PP L+ A L AL AL+ G LT G+ MA P+
Sbjct: 766 NVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVD 825
Query: 617 PRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSN 656
P S+M+L + Y+ + +L AA LSV+N
Sbjct: 826 PMLSKMILA------SEKYSCSEEIL----TVAAMLSVNN 855
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 143/253 (56%), Gaps = 24/253 (9%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LP+ +E++ AV ++ +II GETG GKTTQ+PQ+LFE G+ + +
Sbjct: 396 IQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGY-----TQKGM 450
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
+I TQPRRVA ++ A RVA E+G+ LG EVG+ +R + + +++MTDG+LLRE
Sbjct: 451 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 510
Query: 147 A-----------LYEKQQQLLRSG---QCIEPKDRVFP-LKLILMSATLRVEDFISGGRL 191
+ + E ++ L + I+ R P LK+++ SATL F +
Sbjct: 511 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFST---F 567
Query: 192 FRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE 251
F + P+ +P R+FPV + ++K E DY+ V+ IH P G ILVF+TGQ E+E
Sbjct: 568 FDDAPVFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIE 626
Query: 252 YLCSKLRKASKQL 264
C L+ ++L
Sbjct: 627 AACEMLQDRCRRL 639
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 131/223 (58%), Gaps = 10/223 (4%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
+ L VLP+YA LP+ Q R+F+ G R VVV+TN+AETSLTI GI YV+D G K K
Sbjct: 642 IRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQK 701
Query: 494 KYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKV 553
YN G+ES + SKASA QRAGRAGR A G C+RLY++ + + L + + EI +
Sbjct: 702 SYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRT 761
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VVLL+KS+ I + +F F PP L+ A L AL AL+ G LT G+ MA
Sbjct: 762 SLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAEL 821
Query: 614 PMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSN 656
P+ P S+M+L + Y+ + +L AA LSV+N
Sbjct: 822 PVDPMLSKMILA------SEKYSCSEEIL----TVAAMLSVNN 854
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 149/270 (55%), Gaps = 24/270 (8%)
Query: 10 QRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQ 69
+ P A P + ++ R+ LP+ +E++ A+ ++ +II GETG GKTTQ+PQ
Sbjct: 378 EEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQ 437
Query: 70 FLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD 129
+LFE G+ +++ +I TQPRRVA ++ A RVA E+G+ LG EVG+ +R + +
Sbjct: 438 YLFEEGY-----TNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSE 492
Query: 130 SCSIKFMTDGILLRELKA-----------LYEKQQQLLRSG---QCIEPKDRVFP-LKLI 174
+++MTDG+LLRE + + E ++ L + I+ R P LK++
Sbjct: 493 RTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVL 552
Query: 175 LMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKR 234
+ SAT+ F + F + P+ +P R+FPV + ++K E DY+ V+ IH
Sbjct: 553 VASATMDTARFST---FFDDAPVFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQIHVT 608
Query: 235 LPQGGILVFVTGQREVEYLCSKLRKASKQL 264
P G ILVF+TGQ E+E C L+ ++L
Sbjct: 609 QPPGDILVFLTGQEEIEAACEMLQDRCRRL 638
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 131/223 (58%), Gaps = 10/223 (4%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVK 493
+ L VLP+YA LP+ Q R+F+ G R VVV+TN+AETSLTI GI YV+D G K K
Sbjct: 639 IRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQK 698
Query: 494 KYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKV 553
YN G+ES + SKASA QRAGRAGR A G C+RLY++ + + L + + EI +
Sbjct: 699 SYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRT 758
Query: 554 PVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHY 613
+ VVLL+KS+ I + +F F PP L+ A L AL AL+ G LT G+ MA
Sbjct: 759 SLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAEL 818
Query: 614 PMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSN 656
P+ P S+M+L + Y+ + +L AA LSV+N
Sbjct: 819 PVDPMLSKMILA------SEKYSCSEEIL----TVAAMLSVNN 851
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 149/270 (55%), Gaps = 24/270 (8%)
Query: 10 QRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQ 69
+ P A P + ++ R+ LP+ +E++ A+ ++ +II GETG GKTTQ+PQ
Sbjct: 375 EEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQ 434
Query: 70 FLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD 129
+LFE G+ +++ +I TQPRRVA ++ A RVA E+G+ LG EVG+ +R + +
Sbjct: 435 YLFEEGY-----TNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSE 489
Query: 130 SCSIKFMTDGILLRELKA-----------LYEKQQQLLRSG---QCIEPKDRVFP-LKLI 174
+++MTDG+LLRE + + E ++ L + I+ R P LK++
Sbjct: 490 RTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVL 549
Query: 175 LMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKR 234
+ SAT+ F + F + P+ +P R+FPV + ++K E DY+ V+ IH
Sbjct: 550 VASATMDTARFST---FFDDAPVFRIPGRRFPVDIFYTKAPE-ADYLEACVVSVLQIHVT 605
Query: 235 LPQGGILVFVTGQREVEYLCSKLRKASKQL 264
P G ILVF+TGQ E+E C L+ ++L
Sbjct: 606 QPPGDILVFLTGQEEIEAACEMLQDRCRRL 635
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 170/328 (51%), Gaps = 44/328 (13%)
Query: 436 ALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKY 495
AL VLP+Y+ LP+ Q ++F+ +G R +V+TN+AETSLT+ GI +V+D+G K+K +
Sbjct: 772 ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVF 831
Query: 496 NSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPV 555
N G+++ +I IS+A+A QR+GRAGRT PG C+RLY+ + + N L + EI + +
Sbjct: 832 NPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNL 891
Query: 556 DGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VVLL+KS+ + + F F PP ++ + L L ALD+ G LT+ G+ M +P+
Sbjct: 892 ANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPL 951
Query: 616 SPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSELE 675
P S+ML+ + + + L++ + LSV F
Sbjct: 952 DPALSKMLIV---SCDMGCSSEILLIV-------SMLSVPAIFYR--------------- 986
Query: 676 ERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEF 735
P R+E+ + + K F+ P SD LT ++ + +
Sbjct: 987 ----------PKGREEESDQIREK---------FAVPESDHLTYLNVYLQWKNNNYSTIW 1027
Query: 736 CNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
CN++ +H K M ++ ++R QL ++ Q
Sbjct: 1028 CNDHFIHAKAMRKVREVRAQLKDIMVQQ 1055
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 140/242 (57%), Gaps = 25/242 (10%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LPI ++QE++ + DNS VI+ GETG GKTTQ+ Q+L E G+ + G IG
Sbjct: 529 RQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY------TDYGMIGC 582
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-LKA-- 147
TQPRRVA ++ AKRV+ E+G +LG+EVG+ +R + ++ IK+MTDGILLRE L+
Sbjct: 583 TQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREAD 642
Query: 148 --------LYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRNP 195
+ E ++ L + G E R LKLI+ SAT+ E F + F N
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAA---FFGNV 699
Query: 196 PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCS 255
PI +P R FPV + FSK T DY+ A K+ + +H G IL+F+ GQ ++E
Sbjct: 700 PIFHIPGRTFPVDILFSK-TPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSD 758
Query: 256 KL 257
++
Sbjct: 759 QI 760
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 140/261 (53%), Gaps = 25/261 (9%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRC 81
S+ ++ RK+LPI + + + DN +++ GETG GK+TQ+PQFL E + C
Sbjct: 84 SKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGC 143
Query: 82 SSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
+ +TQPRRVA + AKRVA E G LG++VG+ +R D IK++TDG+L
Sbjct: 144 ------VAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGML 197
Query: 142 LREL-----------KALYEKQQQLLRSGQCIEPKDRVF----PLKLILMSATLRVEDFI 186
LREL L E ++ L + + ++ L++I+MSATL E F
Sbjct: 198 LRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERF- 256
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
F I + RQ+PV +H++ E DY+ + + +H +LP G ILVF+TG
Sbjct: 257 --SEFFDGAEICYISGRQYPVQIHYTYTPE-PDYLDACLRTIFQLHTKLPPGDILVFLTG 313
Query: 247 QREVEYLCSKLRKASKQLLVN 267
Q E+E L + ++ SKQL N
Sbjct: 314 QDEIEALEALIKSYSKQLPSN 334
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 166/318 (52%), Gaps = 47/318 (14%)
Query: 441 PLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSANG 500
PL+A LP QL+VF R VV+STN+AETS+TI GI+YV+DTG K+K++NS G
Sbjct: 342 PLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLG 401
Query: 501 IESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVDGVVL 560
+ES +Q IS+++A QR+GRAGR A G CYR+Y+ A F+ LP + EI ++ + VL
Sbjct: 402 LESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDK-LPKETIPEIKRIDLSQAVL 460
Query: 561 LMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPRHS 620
+K+ + V NF + PP L+ A L ++ ALD NG + LG M+ P+ P +
Sbjct: 461 TLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLA 520
Query: 621 RMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSELEERDNA 680
R +L AR + L + + LS + F+ E+RD A
Sbjct: 521 RAVLA----------AREHNCLSEVIDVVSCLSTDSMFLF------------PQEKRDEA 558
Query: 681 LDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYAL-QCFELSK-SPVEFCNE 738
++ A+L KF + D+LT AL Q E S S ++C++
Sbjct: 559 IE-------------------ARL---KFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQ 596
Query: 739 YALHLKTMEEMSKLRKQL 756
++ + ++ + +RKQL
Sbjct: 597 NFINRRALKTILDIRKQL 614
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 170/328 (51%), Gaps = 44/328 (13%)
Query: 436 ALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKY 495
AL VLP+Y+ LP+ Q ++F+ +G R +V+TN+AETSLT+ GI +V+D+G K+K +
Sbjct: 772 ALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVF 831
Query: 496 NSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPV 555
N G+++ +I IS+A+A QR+GRAGRT PG C+RLY+ + + N L + EI + +
Sbjct: 832 NPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNL 891
Query: 556 DGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPM 615
VVLL+KS+ + + F F PP ++ + L L ALD+ G LT+ G+ M +P+
Sbjct: 892 ANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPL 951
Query: 616 SPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSELE 675
P S+ML+ + + + L++ + LSV F
Sbjct: 952 DPALSKMLIV---SCDMGCSSEILLIV-------SMLSVPAIFYR--------------- 986
Query: 676 ERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEF 735
P R+E+ + + K F+ P SD L+ ++ + +
Sbjct: 987 ----------PKGREEESDQIREK---------FAVPESDHLSYLNVYLQWKNNNYSTIW 1027
Query: 736 CNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
CN++ +H K M ++ ++R QL ++ Q
Sbjct: 1028 CNDHFIHAKAMRKVREVRAQLKDIMVQQ 1055
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 140/243 (57%), Gaps = 25/243 (10%)
Query: 30 NRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIG 89
R+ LPI ++QE++ + DNS VI+ GETG GKTTQ+ Q+L E G+ + G IG
Sbjct: 528 QRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGY------TDYGMIG 581
Query: 90 VTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRE-LKA- 147
TQPRRVA ++ AKRV+ E+G +LG+EVG+ +R + +S IK+MTDGILLRE L+
Sbjct: 582 CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREA 641
Query: 148 ---------LYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRN 194
+ E ++ L + G E R LKLI+ SAT+ E F S F N
Sbjct: 642 DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAS---FFGN 698
Query: 195 PPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLC 254
PI +P R FPV + FSK T DY+ A K+ + +H G IL+F+ GQ ++E
Sbjct: 699 VPIFHIPGRTFPVDILFSK-TPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTS 757
Query: 255 SKL 257
++
Sbjct: 758 DQI 760
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 162/324 (50%), Gaps = 44/324 (13%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLP+Y+ LP+ Q ++F+ G R +V+TN+AETSLT+ GI +V+D G K+K YN
Sbjct: 683 LAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYN 742
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+++ I +S+ASA QR GRAGRT PG CYRLY+ F + L + EI + +
Sbjct: 743 PRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLA 802
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VVLL+KS+ +D + F F P ++ + L L ALD+ G+LT +G+ M +P+
Sbjct: 803 NVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLD 862
Query: 617 PRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSELEE 676
P S+ML+ + ++ VL + LSV F
Sbjct: 863 PTLSKMLIMSAEM------GCSDEVL----TIVSMLSVPAIFFR---------------- 896
Query: 677 RDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEFC 736
P R+E+ +K KF P SD LT + K ++C
Sbjct: 897 ---------PKGREEEADAKK---------EKFQVPESDHLTFLNVYIQWRTHKYSAKWC 938
Query: 737 NEYALHLKTMEEMSKLRKQLLHLL 760
+ LH+K ++++ ++R QL ++
Sbjct: 939 ADNYLHVKALKKVREVRAQLKEIM 962
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 142/256 (55%), Gaps = 30/256 (11%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R+ LP+ Q++M + +N+ VII GETG GKTTQ+ Q+L E GFG SG
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGD------SG 487
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
IG TQPRRVA ++ A+RVA E+G+ LG++VG+ +R + + IK+MTDGILLRE
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 147 A-----------LYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATL---RVEDFISG 188
+ E ++ L + G E + LKLI+ SAT+ + DF G
Sbjct: 548 GDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGG 607
Query: 189 GRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQR 248
N P +P R FPV + F RT + DY+ A K+ ++IH G IL+F+ GQ
Sbjct: 608 -----NCPTFTIPGRTFPVEL-FHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQE 661
Query: 249 EVEYLCSKLRKASKQL 264
++E C +++ +L
Sbjct: 662 DIECTCEMIKEKLGEL 677
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 169/339 (49%), Gaps = 50/339 (14%)
Query: 432 AGVGALCVLPLYAMLPAAAQLRVFEDVKEGE------RLVVVSTNVAETSLTIPGIKYVV 485
A GAL +PLY+ LP AAQ R+FE R V+STN+AETSLTI G+ +V+
Sbjct: 322 ADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVI 381
Query: 486 DTGREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDF 545
D G K K YN +ES + ISKASA QRAGRAGRT PG C+RLY+ + + + D
Sbjct: 382 DPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQ 441
Query: 546 SCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA 605
+ EI + + VVL +K + + + +F F PP L+ A L L+A++ +G LT
Sbjct: 442 TYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTE 501
Query: 606 LGKAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGT 665
LG MA +P+ P+ ++ML+T + +N +L + A LSV +V
Sbjct: 502 LGSLMAEFPLDPQLAKMLITSTE------LNCSNEIL----SITAMLSVPQCWV------ 545
Query: 666 QTNSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQC 725
R N + +E A + A+F++ D LT+
Sbjct: 546 -----------RPNEMRTE-----------------ADEAKARFAHIDGDHLTLLNVYHS 577
Query: 726 FELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQN 764
F+ ++ ++C + ++ +TM+ +R QL ++ N
Sbjct: 578 FKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYN 616
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 138/261 (52%), Gaps = 22/261 (8%)
Query: 22 SRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFL--FEAGFGSN 79
+R + R LP+ +++ ME + +N + + GETG GKTTQ+PQ+ F
Sbjct: 64 NRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQG 123
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ ++ + TQPRRVA ++ A RVA E+ + LG+EVG+ +R + I + +K+ TDG
Sbjct: 124 QPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDG 183
Query: 140 ILLRE-----------LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE + L E ++ L + G E +K+++MSATL
Sbjct: 184 MLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGK 243
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F R F + P++ VP R FPV + F+ E DY+ A + V+ IH +G IL+F
Sbjct: 244 F---QRYFEDCPLLSVPGRTFPVEIFFTPNAE-KDYLEAAIRTVIQIHMVEEVEGDILLF 299
Query: 244 VTGQREVEYLCSKLRKASKQL 264
+TGQ E+E C ++ + + L
Sbjct: 300 LTGQEEIEEACKRIDREIQAL 320
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 164/325 (50%), Gaps = 46/325 (14%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLP+YA LP+ Q++VFE V R V+V+TNVAETS+TI GI YV+D G K++ YN
Sbjct: 310 LRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 369
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
IE + +S+ASA QRAGR GR+ G CYRLY+ F+ LP + E+ + +
Sbjct: 370 PRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLA 428
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA-LGKAMAHYPM 615
V+L +K++ ID V F F +PP ++V+A L AL LD + RLT LG +A +P+
Sbjct: 429 PVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPL 488
Query: 616 SPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSELE 675
+P ++MLL + ++ + +L + AA + + N FV+
Sbjct: 489 NPMFAKMLL------ESGNFGCSQEIL----SIAAMMQIQNIFVV--------------- 523
Query: 676 ERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEF 735
K A H KF+ D LT+ + F ++
Sbjct: 524 -------------------PPNQKSQAIRVHRKFAVEEGDHLTMLNVYEAFIKHNKNSQW 564
Query: 736 CNEYALHLKTMEEMSKLRKQLLHLL 760
C E+ L+ K + + +R+QL LL
Sbjct: 565 CQEHFLNYKGLVRAATVREQLKKLL 589
Score = 136 bits (342), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 142/274 (51%), Gaps = 39/274 (14%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+E R+ LP+ + I+ + + V+I GETGCGK+TQ+PQ+L EAG+ + G
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAE------G 100
Query: 87 R-IGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD-SCSIKFMTDGILLRE 144
R +GVTQPRRVA + A RVA E G LG EVG+ +R D + IKF+TDG+L+RE
Sbjct: 101 RVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVRE 160
Query: 145 LKA-----------LYEKQQQLLRSGQCI----EPKDRVFPLKLILMSATLRVEDFISGG 189
+ L E ++ L + I + + + L+LI+ SATL + F
Sbjct: 161 MMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKF---- 216
Query: 190 RLFRNP-----------PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQG 238
R F N I+ V R FPV + F ++ + DYI + V+ IH+ G
Sbjct: 217 RDFFNQNETSDPARDTCVILTVGGRTFPVDI-FYLQSPVPDYIKSTVETVVKIHQTEGDG 275
Query: 239 GILVFVTGQREVEYLCSKLRKASKQLLVNSSKEN 272
IL F+TGQ EVE + S L + ++ L K +
Sbjct: 276 DILAFLTGQEEVETVVSMLIEQARALARTGMKRH 309
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 160/332 (48%), Gaps = 49/332 (14%)
Query: 430 KRAGVGALCVLPLYAMLPAAAQLRVFE----DVKEGE-RLVVVSTNVAETSLTIPGIKYV 484
+ G L V PLY LP Q R+FE D K G R VV+STN+AETSLTI GI YV
Sbjct: 314 REGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYV 373
Query: 485 VDTGREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPD 544
VD G K K YN +ES + ISKASA QRAGRAGRT PG C+RLY+ F L +
Sbjct: 374 VDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKELIE 433
Query: 545 FSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLT 604
+ EI + + VL +K + ID + +F + PP ++ A L L LD NG LT
Sbjct: 434 QTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDNGDLT 493
Query: 605 ALGKAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEG 664
LG+ + +P+ P + ML+ + + +N VL + A LSV N FV
Sbjct: 494 PLGRKASEFPLDPNLAVMLI------RSPEFYCSNEVL----SLTALLSVPNVFV----- 538
Query: 665 TQTNSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQ 724
R N+ RKL + + +F++P D LT+
Sbjct: 539 ------------RPNS--------------ARKLADEMR---QQFTHPDGDHLTLLNVYH 569
Query: 725 CFELSKSPVEFCNEYALHLKTMEEMSKLRKQL 756
++ + ++C + L + + +RKQL
Sbjct: 570 AYKSGEGTADWCWNHFLSHRALISADNVRKQL 601
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 136/249 (54%), Gaps = 37/249 (14%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLF--EAGFGSNRCSSRSGRI 88
R++LP+ +E ++ ++N ++ GETG GKTTQ+PQF+ E +N +I
Sbjct: 72 RRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTN------TQI 125
Query: 89 GVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKAL 148
TQPRRVA ++ AKRVA E+ + LG+EVG+ +R + G + +K+MTDG+LLRE
Sbjct: 126 ACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMT- 184
Query: 149 YEKQQQLLRSGQCI---EPKDRVFP-----------------LKLILMSATLRVEDFISG 188
+L CI E +R LK+I+MSATL + F
Sbjct: 185 ----DHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKF--- 237
Query: 189 GRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQR 248
+ F + P++ VP R +PV +++++ E DY+ A + V+ IH G ILVF+TG+
Sbjct: 238 QKYFFDAPLLAVPGRTYPVEIYYTQEPE-RDYLEAALRTVLQIHVEEGPGDILVFLTGEE 296
Query: 249 EVEYLCSKL 257
E+E C K+
Sbjct: 297 EIEDACRKI 305
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 149/257 (57%), Gaps = 26/257 (10%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R E+ RK+LP+ +++ ++ + +N VI+ GETG GKTTQ+PQF+ +AG
Sbjct: 66 RYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGL------ 119
Query: 83 SRSGR-IGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGIL 141
R G+ +GVTQPRRVA ++ AKRV+ E+ LG+EVG+ +R ++ +K++TDG+L
Sbjct: 120 IRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGML 179
Query: 142 LRE-----------LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFI 186
LRE + L E ++ L + G + R LKLI+MSATL F
Sbjct: 180 LRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKF- 238
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTG 246
+ F N P+I+VP R PV + +++ DY+ A + V+ IH G ILVF+TG
Sbjct: 239 --QKYFENAPLIKVPGRLHPVEIFYTEEAA-KDYLESAVRTVIDIHTNEGTGDILVFLTG 295
Query: 247 QREVEYLCSKLRKASKQ 263
+ E+E C+K+++ +++
Sbjct: 296 EEEIEDTCAKIQRETRE 312
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 2/197 (1%)
Query: 428 DNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDT 487
+ + G+ + LPLY+ LP Q ++F+ KE R +VSTN+AETSLTI GI +VVD
Sbjct: 309 ETRERGLPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLTIDGIVFVVDP 366
Query: 488 GREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSC 547
G K K YN + +ES + ISKASA QRAGRAGRT PG C+RLY+ F ++ +
Sbjct: 367 GFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTH 426
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALG 607
EI + + VVL + + + + +F F PP L+ A L L ALD G+LT +G
Sbjct: 427 PEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIG 486
Query: 608 KAMAHYPMSPRHSRMLL 624
M+ +P+ P+ S+ML+
Sbjct: 487 SIMSEFPLDPQLSKMLI 503
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 167/325 (51%), Gaps = 46/325 (14%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L VLP+YA LP+ Q++VFE V R V+V+TNVAETS+TI GI YV+D G K++ YN
Sbjct: 310 LRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 369
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
IE + +S+ASA QRAGR GR+ G CYRLY+ F+ LP + E+ + +
Sbjct: 370 PRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLA 428
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA-LGKAMAHYPM 615
V+L +K++ ID V F F +PP ++V+A L AL LD + RLT LG +A +P+
Sbjct: 429 PVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPL 488
Query: 616 SPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSELE 675
+P ++MLL + ++ + +L + AA + + N FV+
Sbjct: 489 NPMFAKMLL------ESGNFGCSQEIL----SIAAMMQIQNIFVV------------PPN 526
Query: 676 ERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKSPVEF 735
++ +A+ H KF+ D LT+ + F ++
Sbjct: 527 QKSHAIR----------------------VHRKFAVEEGDHLTMLNIYEAFIKHNKDSKW 564
Query: 736 CNEYALHLKTMEEMSKLRKQLLHLL 760
C E+ L+ K + + +R+QL LL
Sbjct: 565 CQEHFLNYKGLVRAATVREQLKKLL 589
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 142/274 (51%), Gaps = 39/274 (14%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+E R+ LP+ + I+ + + V+I GETGCGK+TQ+PQ+L EAG+ + G
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAE------G 100
Query: 87 R-IGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD-SCSIKFMTDGILLRE 144
R +GVTQPRRVA + A RVA E G LG EVG+ +R D + IKF+TDG+L+RE
Sbjct: 101 RVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVRE 160
Query: 145 LKA-----------LYEKQQQLLRSGQCI----EPKDRVFPLKLILMSATLRVEDFISGG 189
+ L E ++ L + I + + + L+LI+ SATL + F
Sbjct: 161 MMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKF---- 216
Query: 190 RLFRNP-----------PIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQG 238
R F N I+ V R FPV + F ++ + DYI + V+ IH+ G
Sbjct: 217 RDFFNQNETSDPARDTCVILTVEGRTFPVDI-FYLQSPVPDYIKSTVETVVKIHQTEGDG 275
Query: 239 GILVFVTGQREVEYLCSKLRKASKQLLVNSSKEN 272
+L F+TGQ EVE + S L + ++ L K +
Sbjct: 276 DVLAFLTGQEEVETVVSMLIEQARALARTGMKRH 309
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 159 bits (402), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 166/337 (49%), Gaps = 52/337 (15%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFE----DVKEGE--RLVVVSTNVAETSLTIPGIKYVVDT 487
VG + ++PLY+ LP Q R+FE + G R VVVSTN+AETSLTI G+ +V+D
Sbjct: 380 VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDP 439
Query: 488 GREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSC 547
G K K YN +ES + ISKASA QRAGRAGRT PG C+RLY+ + + D +
Sbjct: 440 GFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTY 499
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALG 607
EI + + VVL +K + ID + +F F PP L+ A L L AL+ +G LT LG
Sbjct: 500 PEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELG 559
Query: 608 KAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQT 667
MA +P+ P+ ++M++ Y +N VL + A LSV FV E
Sbjct: 560 SMMAEFPLDPQLAKMVIASC------DYNCSNEVL----SITAMLSVPQCFVRPTEA--- 606
Query: 668 NSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFE 727
K+ A + +F++ D LT+ F+
Sbjct: 607 -------------------------------KKAADEAKMRFAHIDGDHLTLLNVYHAFK 635
Query: 728 LSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL--FN 762
+ V++C + ++ +++ +R+QL ++ FN
Sbjct: 636 QNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFN 672
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 135/256 (52%), Gaps = 23/256 (8%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H R ++ R LP+ + + + + + ++ GETG GKTTQ+PQ+ E + +
Sbjct: 123 HTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE--YMRS 180
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ G + TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + +K+MTDG
Sbjct: 181 LPGPKRG-VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDG 239
Query: 140 ILLRE-----------LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE + L E ++ L + G E + LK+I+MSATL
Sbjct: 240 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGK 299
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F F N P++ +P R PV + ++ E DY+ A + V+ IH +G +L+F
Sbjct: 300 F---QIYFDNCPLLTIPGRTHPVEIFYTPEPE-RDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 244 VTGQREVEYLCSKLRK 259
+TGQ E++ C ++++
Sbjct: 356 LTGQEEIDEACKRIKR 371
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 159 bits (402), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 166/337 (49%), Gaps = 52/337 (15%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFE----DVKEGE--RLVVVSTNVAETSLTIPGIKYVVDT 487
VG + ++PLY+ LP Q R+FE + G R VVVSTN+AETSLTI G+ +V+D
Sbjct: 380 VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDP 439
Query: 488 GREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSC 547
G K K YN +ES + ISKASA QRAGRAGRT PG C+RLY+ + + D +
Sbjct: 440 GFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTY 499
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALG 607
EI + + VVL +K + ID + +F F PP L+ A L L AL+ +G LT LG
Sbjct: 500 PEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELG 559
Query: 608 KAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQT 667
MA +P+ P+ ++M++ Y +N VL + A LSV FV E
Sbjct: 560 SMMAEFPLDPQLAKMVIASC------DYNCSNEVL----SITAMLSVPQCFVRPTEA--- 606
Query: 668 NSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFE 727
K+ A + +F++ D LT+ F+
Sbjct: 607 -------------------------------KKAADEAKMRFAHIDGDHLTLLNVYHAFK 635
Query: 728 LSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL--FN 762
+ V++C + ++ +++ +R+QL ++ FN
Sbjct: 636 QNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFN 672
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 135/256 (52%), Gaps = 23/256 (8%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H R ++ R LP+ + + + + + ++ GETG GKTTQ+PQ+ E + +
Sbjct: 123 HTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE--YMRS 180
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ G + TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + +K+MTDG
Sbjct: 181 LPGPKRG-VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDG 239
Query: 140 ILLRE-----------LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE + L E ++ L + G E + LK+I+MSATL
Sbjct: 240 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGK 299
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F F N P++ +P R PV + ++ E DY+ A + V+ IH +G +L+F
Sbjct: 300 F---QIYFDNCPLLTIPGRTHPVEIFYTPEPE-RDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 244 VTGQREVEYLCSKLRK 259
+TGQ E++ C ++++
Sbjct: 356 LTGQEEIDEACKRIKR 371
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 166/337 (49%), Gaps = 52/337 (15%)
Query: 434 VGALCVLPLYAMLPAAAQLRVFE----DVKEGE--RLVVVSTNVAETSLTIPGIKYVVDT 487
VG + ++PLY+ LP Q R+FE + G R VVVSTN+AETSLTI G+ +V+D
Sbjct: 380 VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDP 439
Query: 488 GREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSC 547
G K K YN +ES + ISKASA QRAGRAGRT PG C+RLY+ + + D +
Sbjct: 440 GFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTY 499
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALG 607
EI + + VVL +K + ID + +F F PP L+ A L L AL+ +G LT LG
Sbjct: 500 PEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELG 559
Query: 608 KAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQT 667
MA +P+ P+ ++M++ Y +N VL + A LSV FV E
Sbjct: 560 SMMAEFPLDPQLAKMVIASC------DYNCSNEVL----SITAMLSVPQCFVRPTEA--- 606
Query: 668 NSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFE 727
K+ A + +F++ D LT+ F+
Sbjct: 607 -------------------------------KKAADEAKMRFAHIDGDHLTLLNVYHAFK 635
Query: 728 LSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL--FN 762
+ V++C + ++ +++ +R+QL ++ FN
Sbjct: 636 QNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFN 672
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 135/256 (52%), Gaps = 23/256 (8%)
Query: 20 HVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSN 79
H R ++ R LP+ + + + + + ++ GETG GKTTQ+PQ+ E + +
Sbjct: 123 HTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE--YMRS 180
Query: 80 RCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDG 139
+ G + TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + +K+MTDG
Sbjct: 181 LPGPKRG-VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDG 239
Query: 140 ILLRE-----------LKALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVED 184
+LLRE + L E ++ L + G E + LK+I+MSATL
Sbjct: 240 MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGK 299
Query: 185 FISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHK-RLPQGGILVF 243
F F N P++ +P R PV + ++ E DY+ A + V+ IH +G +L+F
Sbjct: 300 F---QIYFDNCPLLTIPGRTHPVEIFYTPEPE-RDYLEAAIRTVIQIHMCEEEEGDLLLF 355
Query: 244 VTGQREVEYLCSKLRK 259
+TGQ E++ C ++++
Sbjct: 356 LTGQEEIDEACKRIKR 371
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Query: 433 GVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKV 492
G A+ VLPLYA LP A QLRVF+ +G R V++STN+AETS+TI GIKYVVDTG K
Sbjct: 318 GCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKA 377
Query: 493 KKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISK 552
KKYN +G+E +Q +SK A QR GRAGR G CYRLY+ F + EI +
Sbjct: 378 KKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK-FDKMTVPEIQR 436
Query: 553 VPVDGVVLLMKSMNIDKVSNFPF---PTPPEVTALVEAERCLKALEALDSNGRLTALGKA 609
+ V+L + +M + V F F P+P + A + L ALE D LT +G+
Sbjct: 437 CNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRK 496
Query: 610 MAHYPMSPRHSRMLL 624
MA +P+ P+ ++ +L
Sbjct: 497 MAAFPLEPKFAKTIL 511
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 142/281 (50%), Gaps = 43/281 (15%)
Query: 10 QRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQ 69
Q PLA P P VE R+ LPI +++ + + ++ GETG GKTTQ+PQ
Sbjct: 52 QPPLAQPSAS--PYPEAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQ 109
Query: 70 FLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD 129
+L+E G SR G I VTQPRRVA ++ A RV+ E LGK VG+ VR D +
Sbjct: 110 YLYEGGI------SRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSE 163
Query: 130 SCSIKFMTDGILLRELKALYEKQQQLLRSGQCI---EPKDRV------------------ 168
IKF+TDG+LLRE + LLR C+ E +R
Sbjct: 164 DTRIKFLTDGMLLREAIS-----DSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRK 218
Query: 169 ----FPLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQA 224
PLK+I+MSAT+ V+ F + F P++ + RQ P+ V ++K+ + DY+ A
Sbjct: 219 ELGKLPLKVIVMSATMDVDLF---SQYFNGAPVLYLEGRQHPIQVFYTKQPQ-NDYLHAA 274
Query: 225 YKKVMSIHKRLPQG-GILVFVTGQREVEYLCSKLRKASKQL 264
V IH+ P ILVF+TGQ E+E + R +K L
Sbjct: 275 LVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHL 315
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Query: 433 GVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKV 492
G ++ VLPLYA LP + QLRVF+ +G R V++STN+AETS+TI GIKYVVDTG K
Sbjct: 309 GCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKA 368
Query: 493 KKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISK 552
KKYN +G+E +Q +SK A QR GRAGR G CYRLY+ F + EI +
Sbjct: 369 KKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEK-FEKMTVPEIQR 427
Query: 553 VPVDGVVLLMKSMNIDKVSNFPF---PTPPEVTALVEAERCLKALEALDSNGRLTALGKA 609
+ V+L + +M + V F F P+P + A + L ALE D LT +G+
Sbjct: 428 CNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRK 487
Query: 610 MAHYPMSPRHSRMLL 624
MA +P+ PR ++ +L
Sbjct: 488 MAAFPLEPRFAKTIL 502
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 136/264 (51%), Gaps = 41/264 (15%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
+E R+ LPI +++ + + ++ GETG GKTTQ+PQ+L+E G SR G
Sbjct: 58 LELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGI------SRQG 111
Query: 87 RIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK 146
I VTQPRRVA ++ A RV+ E LGK VG+ VR + + IKF+TDG+LLRE
Sbjct: 112 IIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAI 171
Query: 147 ALYEKQQQLLRSGQCI---EPKDRV----------------------FPLKLILMSATLR 181
+ LLR C+ E +R PLK+I+MSAT+
Sbjct: 172 S-----DSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMD 226
Query: 182 VEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQG-GI 240
V+ F + F P++ + RQ P+ + ++K+ + DY+ A V IH+ P I
Sbjct: 227 VDLF---SQYFNRAPVLYLEGRQHPIQIFYTKQPQ-QDYLHAALVSVFQIHQEAPASQDI 282
Query: 241 LVFVTGQREVEYLCSKLRKASKQL 264
LVF+TGQ E+E + R ++ L
Sbjct: 283 LVFLTGQEEIEAMSKTCRDIARHL 306
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 116/189 (61%), Gaps = 2/189 (1%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
L V+P Y LPA Q++ F+ G R VVV+TN+AE S+TIPGI YV+DTG K++ +
Sbjct: 329 LWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQH 388
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+ANG+E+ +SKASA QRAGRAGR PG CYRLY + F + + EI + +
Sbjct: 389 AANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEFER-FAEGTVPEIQRCQMA 447
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTA-LGKAMAHYPM 615
+L +K++ + V F + +PP A++ L AL A+D +LT+ LG MA +P+
Sbjct: 448 STILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPL 507
Query: 616 SPRHSRMLL 624
P HS+ LL
Sbjct: 508 PPMHSKCLL 516
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 140/266 (52%), Gaps = 40/266 (15%)
Query: 27 VENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSG 86
++ R LPI I+ +II GETGCGK+TQVPQFL EAG+ ++ G
Sbjct: 70 IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAAD------G 123
Query: 87 R-IGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLREL 145
R I +TQPRRVAV+ A RVA E LG +VG+ VR D +KFMTDG+LLRE+
Sbjct: 124 RQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREI 183
Query: 146 KA-----------LYEKQQQ---------LLRSGQCIEPKDRVFPLKLILMSATLRVE-- 183
A + E ++ LLR + I+ ++ L++I+ SATL E
Sbjct: 184 LADPLLSKYSIIMIDEAHERSCNTDILLGLLR--KIIQIRN---DLRIIVSSATLDAELF 238
Query: 184 -DFI----SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQG 238
DF +G II V R PV VH +K T + DY A V++IHK G
Sbjct: 239 KDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTK-TSVPDYCQSAVDTVINIHKHENPG 297
Query: 239 GILVFVTGQREVEYLCSKLRKASKQL 264
ILVF+TGQ EVE +C KLR+ + L
Sbjct: 298 DILVFLTGQDEVEDVCEKLRELAGNL 323
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 149/267 (55%), Gaps = 24/267 (8%)
Query: 8 SLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQV 67
S + P+ + V +E++RK LP+ + ++++A+N+ ++I ETG GKTTQ+
Sbjct: 392 SAENPVDTDKMTDVKVEKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQL 451
Query: 68 PQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKI 127
PQFL EAG+ + +I TQPRRVA ++ A RVA E+ + LG+EVG+ +R +
Sbjct: 452 PQFLHEAGYTKG-----NKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENAT 506
Query: 128 GDSCSIKFMTDGILLRELKA-----------LYEKQQQLLRSG---QCIEPKDRVFP-LK 172
+ IK++TDG+LLRE + E ++ L + ++ R P LK
Sbjct: 507 SEKTVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLK 566
Query: 173 LILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIH 232
+++ SAT+ E F + F P+ VP R++PV ++++ + E +YI A ++ IH
Sbjct: 567 VLISSATIDAEKFSA---YFDEAPVFYVPGRRYPVDIYYTPQPE-ANYIQAAITTILQIH 622
Query: 233 KRLPQGGILVFVTGQREVEYLCSKLRK 259
P G ILVF+TGQ E+E + +++
Sbjct: 623 TTQPAGDILVFLTGQDEIELMSENMQE 649
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
LC P+YA LP+ Q ++F+ G R VV++TN+AETS+TI G+ +V+D+G K YN
Sbjct: 663 LC--PIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYN 720
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
G+ES S+ASA QRAGRAGR PG C+RLY+ +NN L + EI + +
Sbjct: 721 PRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLT 780
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
+VLL+KS+ I+ + +F F P L+ + L AL AL++ G LT LG+ MA +P
Sbjct: 781 NIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEFPTD 840
Query: 617 PRHSRMLL 624
P S+ L+
Sbjct: 841 PMLSKSLI 848
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 150/279 (53%), Gaps = 34/279 (12%)
Query: 13 LAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLF 72
LA + R ++ RK LP+ + E+++ + N +II GETG GKTTQ+PQ+L
Sbjct: 202 LAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLV 261
Query: 73 EAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVR-HDKKIGDSC 131
E GF +I +TQPRRVA + A RVA E+ + LGKEVG+Q+R DK +
Sbjct: 262 EDGF----TDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKT 317
Query: 132 SIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCIEPKDRVFP----LKLILM 176
+K+MTDG+LLRE + E ++ L + I + P LKL++
Sbjct: 318 VLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLIS 377
Query: 177 SATLRVEDFISGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIH--KR 234
SAT+ + F F N PI VP R++PV +H++ + E +YI A + IH +
Sbjct: 378 SATMNAKKF---SEFFDNCPIFNVPGRRYPVDIHYTLQPE-ANYIHAAITTIFQIHTTQS 433
Query: 235 LPQGGILVFVTGQREVEY-------LCSKLRKASKQLLV 266
LP G ILVF+TGQ E+E + SKL +KQ+++
Sbjct: 434 LP-GDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMII 471
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 107/189 (56%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
+ + P+YA LP QL++F+ E R VV++TN+AETSLTI GI+YV+D G K Y
Sbjct: 469 MIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYV 528
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+ G+ S+AS QRAGRAGR PG C+R+++ + + L EI++ +
Sbjct: 529 PSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLS 588
Query: 557 GVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMS 616
VLL+ S+ + + FP P + L ++ L L AL+S G +T LGK M +P
Sbjct: 589 NTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCE 648
Query: 617 PRHSRMLLT 625
P +++L T
Sbjct: 649 PEFAKVLYT 657
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 155 bits (393), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 112/200 (56%), Gaps = 5/200 (2%)
Query: 430 KRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGE-----RLVVVSTNVAETSLTIPGIKYV 484
+ G G L V PLY LP Q R+FE E R VV+STN+AETSLTI GI YV
Sbjct: 332 REEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYV 391
Query: 485 VDTGREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPD 544
VD G K K YN +ES + ISKASA QRAGRAGRT PG C+RLY+ F L +
Sbjct: 392 VDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIE 451
Query: 545 FSCAEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLT 604
S EI + + VL +K + ID + +F F PP ++ A L L LD G LT
Sbjct: 452 QSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNLT 511
Query: 605 ALGKAMAHYPMSPRHSRMLL 624
LG+ + +P+ P + ML+
Sbjct: 512 PLGRLASQFPLDPMLAVMLI 531
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 137/251 (54%), Gaps = 25/251 (9%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQF-LFEAGFGSNRCSSRSGRIG 89
R++LP+ E ++ +N ++ GETG GKTTQ+PQF LF+ + ++
Sbjct: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFD-----EMPHLENTQVA 144
Query: 90 VTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELK--- 146
TQPRRVA ++ A+RVA E+ + LG+EVG+ +R + K + +K+MTDG+LLRE
Sbjct: 145 CTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDH 204
Query: 147 --------ALYEKQQQLLRS----GQCIEPKDRVFPLKLILMSATLRVEDFISGGRLFRN 194
L E ++ L + G + R LK+I+MSATL E F R F +
Sbjct: 205 DLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKF---QRYFND 261
Query: 195 PPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLC 254
P++ VP R +PV ++++ + DY+ A + V+ IH G IL+F+TG+ E+E
Sbjct: 262 APLLAVPGRTYPVELYYTPEFQ-RDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAV 320
Query: 255 SKLRKASKQLL 265
K+ QL+
Sbjct: 321 RKISLEGDQLV 331
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 174/341 (51%), Gaps = 45/341 (13%)
Query: 424 EKMGDNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKY 483
+K G + + +LP+Y+ LPA Q ++F+D+ +R ++++TN+AETSLTI GI+Y
Sbjct: 593 KKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRY 652
Query: 484 VVDTGREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILP 543
V+D G K+K YN G++S I ISKA+A QR+GRAGRTAPG YRLY+ F +
Sbjct: 653 VIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMY 712
Query: 544 DFSCAEISKVPVDGVVLLMKSMNI-DKVSNFPFPTPPEVTALVEAERCLKALEALDSNGR 602
+ EI + + +LL+KS+++ D++S FPF P + + + L + A+D++G+
Sbjct: 713 LQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQ 772
Query: 603 LTALGKAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQL 662
LT LG MA +P+ P S++LL ++ N + + LSV F
Sbjct: 773 LTPLGLQMAKFPLQPSLSKILLIAVR----------NGCSDEMLTIVSMLSVPQVFY--- 819
Query: 663 EGTQTNSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYA 722
P RQ++ A ++ KF SD LT+
Sbjct: 820 ----------------------RPKERQKE---------ADIARNKFFIAKSDHLTLLNV 848
Query: 723 LQCFELSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLLFNQ 763
+ + + +CN++ + K++ +R QLL +L +Q
Sbjct: 849 FEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLLTILKSQ 889
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 145/271 (53%), Gaps = 32/271 (11%)
Query: 25 NEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSR 84
+++++ ++ LP+ +++ + +N V+I GETG GKTTQ+ Q+L+E G+ ++R S
Sbjct: 341 DDIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKS- 399
Query: 85 SGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCS-IKFMTDGILLR 143
I VTQPRRVA ++ AKRVA E+ + LGKEVG+ +R + C+ +KF+TDGILLR
Sbjct: 400 ---IVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLR 456
Query: 144 E--------------LKALYEKQQQ---LLRSGQCIEPKDRVFPLKLILMSATLRVEDFI 186
E + +E+ LL + + + R LKLI+ SAT+ + F
Sbjct: 457 ETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRR--DLKLIITSATMNAKKF- 513
Query: 187 SGGRLFRNPPIIEVPTRQFPVTVHFSKRTEIVDYIGQAYKKVMSIH--KRLPQGGILVFV 244
F N P +P R FPV ++ + DY+ A + + IH G IL+F+
Sbjct: 514 --SAFFGNAPQFTIPGRTFPVQTIYTS-NPVQDYVEAAVSQAVKIHLANDCSSGDILIFM 570
Query: 245 TGQREVEYLCSKLRKASKQLLVNSSKENKGN 275
TGQ ++E L++ K L V S K N
Sbjct: 571 TGQEDIETTFDTLQE--KFLQVYSKKFGTAN 599
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 164/332 (49%), Gaps = 52/332 (15%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
++PL++++P Q +VF+ G R +V++TN+AETS+TI + YV+D G+ K ++
Sbjct: 512 FLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFD 571
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+ N I + +W+SKA+A QR GRAGR PGHCY LY + + ++L D+ EI + P++
Sbjct: 572 TQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLY-NGLRASLLDDYQLPEILRTPLE 630
Query: 557 GVVLLMKSMNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYP 614
+ L +K + + ++ F PP A+V + + L L ALD LT LG +A P
Sbjct: 631 ELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLP 690
Query: 615 MSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSEL 674
+ P +M+L + L + AA+LS +PFV+ L
Sbjct: 691 VEPHIGKMIL----------FGALFCCLDPVLTIAASLSFKDPFVIPLG----------- 729
Query: 675 EERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKS--- 731
+EK+ + KE+AK SD LTV A + +E +K
Sbjct: 730 ---------------KEKIADARRKELAK-------ETRSDHLTVVNAFEGWEEAKRRGF 767
Query: 732 --PVEFCNEYALHLKTMEEMSKLRKQLL-HLL 760
++C EY L T++ + ++ Q HLL
Sbjct: 768 RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLL 799
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 113/223 (50%), Gaps = 29/223 (13%)
Query: 4 NLPSSLQRPLAAPIVVHVSRPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGK 63
+L LQR P R E++ RK LP M++E++ +N++ +I GETGCGK
Sbjct: 176 HLLEDLQRKKTDP------RYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGK 229
Query: 64 TTQVPQFLFEAGFGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHL--GKEVGFQV 121
TTQV QF+ + R + RI TQPRR++ ++ A+RVA E G G+Q+
Sbjct: 230 TTQVTQFILDNYI--ERGKGSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQI 287
Query: 122 RHDKKI-GDSCSIKFMTDGILLRELKA-----------LYEKQQQLLRSGQCIEP-KDRV 168
R ++ SI + T GI+L+ L++ L E ++ L+S + KD +
Sbjct: 288 RLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLL 347
Query: 169 F---PLKLILMSATLRVEDFISGGRLFRNPPIIEVPTRQFPVT 208
LK+ILMSATL E F F N P+I +P FPV
Sbjct: 348 HFRSDLKVILMSATLNAEKF---SEYFGNCPMIHIPGFTFPVV 387
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 165/332 (49%), Gaps = 52/332 (15%)
Query: 437 LCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYN 496
++PL++++P Q +VF+ G R +V++TN+AETS+TI + YV+D G+ K ++
Sbjct: 519 FLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFD 578
Query: 497 SANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVD 556
+ N I + +W+SKA+A QR GRAGR PGHCY LY + + ++L D+ EI + P++
Sbjct: 579 TQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLY-NGLRASLLDDYQLPEILRTPLE 637
Query: 557 GVVLLMKSMNIDKVSNF--PFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYP 614
+ L +K + + ++ F PP A++ + R L L ALD LT LG +A P
Sbjct: 638 ELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLP 697
Query: 615 MSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQTNSNDSEL 674
+ P +M+L + L + AA+LS +PFV+ L
Sbjct: 698 VEPHIGKMIL----------FGALFCCLDPVLTIAASLSFKDPFVIPLG----------- 736
Query: 675 EERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFELSKS--- 731
+EK+ + KE+AK + SD LTV A + +E ++
Sbjct: 737 ---------------KEKIADARRKELAK-------DTRSDHLTVVNAFEGWEEARRRGF 774
Query: 732 --PVEFCNEYALHLKTMEEMSKLRKQLL-HLL 760
++C EY L T++ + ++ Q HLL
Sbjct: 775 RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLL 806
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 23/204 (11%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R E+++ R+ LP M++E++ ++++ +I GETGCGKTTQV QF+ + R
Sbjct: 196 RYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYI--ERGK 253
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHL--GKEVGFQVRHDKKI-GDSCSIKFMTDG 139
+ RI TQPRR++ ++ A+RVA E G G+Q+R ++ SI + T G
Sbjct: 254 GSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTG 313
Query: 140 ILLRELKA-----------LYEKQQQLLRSGQCIEPKDRVF----PLKLILMSATLRVED 184
I+L+ L++ L E ++ L+S + + LK+ILMSATL E
Sbjct: 314 IILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEK 373
Query: 185 FISGGRLFRNPPIIEVPTRQFPVT 208
F F N P+I +P FPV
Sbjct: 374 F---SEYFGNCPMIHIPGFTFPVV 394
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 165/333 (49%), Gaps = 39/333 (11%)
Query: 428 DNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDT 487
D + + L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD
Sbjct: 304 DVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDG 363
Query: 488 GREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSC 547
G K +N G++ E+ ISK+ A QR+GRAGRTA G C+R+YS +N +PD
Sbjct: 364 GFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVI 423
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALG 607
EI + + VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG
Sbjct: 424 PEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLG 483
Query: 608 KAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQT 667
+M +P+ P + +K S +L+L AA LSV N F+ +
Sbjct: 484 LSMVEFPLPPHLT------CAVIKAASLDCEDLLL----PIAAMLSVENVFIRPV----- 528
Query: 668 NSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFE 727
DP ++E +++ +E+A AK + +D T+A + +
Sbjct: 529 -----------------DPEYQKE--AEQRHRELA----AK-AGGFNDFATLAVIFEQCK 564
Query: 728 LSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
S +P +C ++ +H + + ++ QL L+
Sbjct: 565 SSGAPASWCQKHWIHWRCLFSAFRVEAQLRELI 597
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 132/249 (53%), Gaps = 34/249 (13%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
PI ++I++AV DNS +I+ G TG GKTTQ+P++L+EAGF S+ G IGVTQP
Sbjct: 53 FPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF------SQHGMIGVTQP 106
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA------ 147
R+VA ++ A+RVA E+ LG +VG+QVR D +IK+MTDG LL+ +
Sbjct: 107 RKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTK 166
Query: 148 -----LYEKQQQLLRSGQCIEPKDRVFP---------LKLILMSATLRVEDFISGGRLFR 193
L E ++ L + ++F LK+++MSAT+ + + F
Sbjct: 167 FSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSA---FFG 223
Query: 194 NPPIIEVPTRQFPVTVHFS-----KRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQR 248
N PI ++P R +PV F + E YI K M IH G ILVF+TGQ
Sbjct: 224 NCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQF 283
Query: 249 EVEYLCSKL 257
E+E C L
Sbjct: 284 EIEKSCELL 292
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 165/333 (49%), Gaps = 39/333 (11%)
Query: 428 DNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDT 487
D + + L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD
Sbjct: 304 DVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDG 363
Query: 488 GREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSC 547
G K +N G++ E+ ISK+ A QR+GRAGRTA G C+R+YS +N +PD
Sbjct: 364 GFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVI 423
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALG 607
EI + + VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG
Sbjct: 424 PEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLG 483
Query: 608 KAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQT 667
+M +P+ P + ++ S +L+L AA LSV N F+ +
Sbjct: 484 LSMVEFPLPPHLT------CAVIRAASLDCEDLLL----PIAAMLSVENVFIRPV----- 528
Query: 668 NSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFE 727
DP ++E ++K +E+A AK + +D T+A + +
Sbjct: 529 -----------------DPEYQKE--AEQKHRELA----AK-AGGFNDFATLAVIFEQCK 564
Query: 728 LSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
S +P +C ++ +H + + ++ QL L+
Sbjct: 565 SSGAPASWCQKHWIHWRCLFSAFRVEAQLRELI 597
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 132/249 (53%), Gaps = 34/249 (13%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
PI +++++AV DNS +I+ G TG GKTTQ+P++L+EAGF S+ G IGVTQP
Sbjct: 53 FPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF------SQHGMIGVTQP 106
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA------ 147
R+VA ++ A+RVA E+ LG +VG+QVR D +IK+MTDG LL+ +
Sbjct: 107 RKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNK 166
Query: 148 -----LYEKQQQLLRSGQCIEPKDRVFP---------LKLILMSATLRVEDFISGGRLFR 193
L E ++ L + ++F LK+++MSAT+ + + F
Sbjct: 167 FSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSA---FFG 223
Query: 194 NPPIIEVPTRQFPVTVHFS-----KRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQR 248
N PI ++P R +PV F + E YI K M IH G ILVF+TGQ
Sbjct: 224 NCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQF 283
Query: 249 EVEYLCSKL 257
E+E C L
Sbjct: 284 EIEKSCELL 292
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 120/198 (60%), Gaps = 3/198 (1%)
Query: 429 NKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTG 488
N G + C+LPL++ +P Q +VF+ V +G V++STN+AETS+TI + YV+D+
Sbjct: 675 NPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSC 734
Query: 489 REKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCA 548
++KVK + S N + +Y W SK + QR GRAGR PG C+ L S A F+ + +
Sbjct: 735 KQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLT-P 793
Query: 549 EISKVPVDGVVLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTAL 606
EI + P+ V L +K + + + +F PP + A++EAE L+ L+ALDSN LT L
Sbjct: 794 EIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPL 853
Query: 607 GKAMAHYPMSPRHSRMLL 624
G+ +A P+ PR +M++
Sbjct: 854 GRILAKLPIEPRLGKMMI 871
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 25/212 (11%)
Query: 18 VVHVSRPN--EVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAG 75
+ H+ PN +V +R+ LP+ E+EIM AV+++ VII G TGCGKTTQVPQ++ +
Sbjct: 372 MYHIQDPNIKQVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEY 431
Query: 76 FGSNRCSSRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD-SCSIK 134
++R + + I VTQPRR++ ++ A+RVAFE G +GK G+ VR + + S+
Sbjct: 432 IRNDRAAQCN--IVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASML 489
Query: 135 FMTDGILLRELKALYEKQQQLLRSGQCIEPKD--------------RVFP-LKLILMSAT 179
F T G+LLR+L++ ++ I +D + FP +++ILMSAT
Sbjct: 490 FCTVGVLLRKLESGIRGISHVIVDE--IHERDINTDFLLVVLRDVIQAFPEIRVILMSAT 547
Query: 180 LRVEDFISGGRLFRNPPIIEVPTRQFPVTVHF 211
+ F F N PIIEV R FPV ++
Sbjct: 548 IDTSMFC---EYFFNCPIIEVFGRTFPVQEYY 576
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 165/333 (49%), Gaps = 39/333 (11%)
Query: 428 DNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDT 487
D + + L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD
Sbjct: 304 DVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDG 363
Query: 488 GREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSC 547
G K +N G++ E+ ISK+ A QR+GRAGRT+ G C+R+YS +N +PD
Sbjct: 364 GFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVI 423
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALG 607
EI + + VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG
Sbjct: 424 PEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLG 483
Query: 608 KAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQT 667
+M +P+ P + +K S +L+L AA LSV N F+ +
Sbjct: 484 LSMVEFPLPPHLT------CAVIKAASLDCEDLLL----PIAAMLSVENVFIRPV----- 528
Query: 668 NSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFE 727
DP ++E +++ +E+A AK + +D T+A + +
Sbjct: 529 -----------------DPEYQKE--AEQRHRELA----AK-AGGFNDFATLAVIFEQCK 564
Query: 728 LSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
S +P +C ++ +H + + ++ QL L+
Sbjct: 565 SSGAPASWCQKHWIHWRCLFSAFRVEAQLRELI 597
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 132/249 (53%), Gaps = 34/249 (13%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
PI ++I++AV DNS +I+ G TG GKTTQ+P++L+EAGF S+ G IGVTQP
Sbjct: 53 FPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF------SQHGMIGVTQP 106
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA------ 147
R+VA ++ A+RVA E+ LG +VG+QVR D +IK+MTDG LL+ +
Sbjct: 107 RKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTK 166
Query: 148 -----LYEKQQQLLRSGQCIEPKDRVFP---------LKLILMSATLRVEDFISGGRLFR 193
L E ++ L + ++F LK+++MSAT+ + + F
Sbjct: 167 FSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSA---FFG 223
Query: 194 NPPIIEVPTRQFPVTVHFS-----KRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQR 248
N PI ++P R +PV F + E YI K M IH G ILVF+TGQ
Sbjct: 224 NCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQF 283
Query: 249 EVEYLCSKL 257
E+E C L
Sbjct: 284 EIEKSCELL 292
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 131/221 (59%), Gaps = 11/221 (4%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL++ L + Q +VF+ G R ++STN+AETS+TI GI++VVD+G+ K Y+
Sbjct: 412 VLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQ 471
Query: 499 NGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ + WIS+ASA QR GRAGRT PG CYRLY+ + ++ P + EI +V +D +
Sbjct: 472 AKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAP-YPVPEIRRVALDAL 530
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
VL MKSM++ FPF PP ++ A L+ ALDS+ LT +G +A P+
Sbjct: 531 VLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVV 590
Query: 619 HSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFV 659
+ML ++ +M ++ A VL AAALSV +PF
Sbjct: 591 IGKML--ILGSM----FSLAEPVL----TIAAALSVQSPFT 621
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 137/255 (53%), Gaps = 41/255 (16%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R +++ R LPI I++ + ++ V++ G+TGCGK+TQVPQ+L AGF C
Sbjct: 153 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVAC- 211
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILL 142
TQPRR+A ++ AKRV FE G +VG+Q+R + + I F+T G+LL
Sbjct: 212 --------TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLL 263
Query: 143 RELK-----------ALYEKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFIS 187
R+++ + E ++ L + + R+ P LK+ILMSAT+ + F S
Sbjct: 264 RQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSS 323
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHF--------SKRTEIVDYIGQAYKKVM-SIHKRLP-- 236
F + P+++VP R FP+TV + + ++E +D + + +V+ +I + P
Sbjct: 324 ---YFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLD--PRPFLRVLEAIDNKYPPE 378
Query: 237 -QGGILVFVTGQREV 250
+G +LVF++G E+
Sbjct: 379 ERGDLLVFLSGMAEI 393
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 165/333 (49%), Gaps = 39/333 (11%)
Query: 428 DNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDT 487
D + + L +LP Y + Q R+F G R V+STN++ TSLTI GI+YVVD
Sbjct: 304 DVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDG 363
Query: 488 GREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSC 547
G K +N G++ E+ ISK+ A QR+GRAGRTA G C+R+YS ++ +PD
Sbjct: 364 GFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVI 423
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALG 607
EI + + VVL +K + I V FP+ PP ++EA + L +A+D +G +T LG
Sbjct: 424 PEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLG 483
Query: 608 KAMAHYPMSPRHSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFVLQLEGTQT 667
+M +P+ P + ++ S +L+L AA LSV N F+ +
Sbjct: 484 LSMVEFPLPPHLT------CAVIRAASLDCEDLLL----PIAAMLSVENVFIRPV----- 528
Query: 668 NSNDSELEERDNALDSEDPMCRQEKLGKRKLKEVAKLSHAKFSNPTSDVLTVAYALQCFE 727
DP ++E +++ +E+A AK + +D T+A + +
Sbjct: 529 -----------------DPEYQKE--AEQRHRELA----AK-AGGFNDFATLAVIFEQCK 564
Query: 728 LSKSPVEFCNEYALHLKTMEEMSKLRKQLLHLL 760
S +P +C ++ +H + + ++ QL L+
Sbjct: 565 SSGAPASWCQKHWIHWRCLFSAFRVEAQLRELI 597
Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 132/249 (53%), Gaps = 34/249 (13%)
Query: 34 LPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGVTQP 93
PI +++++AV DNS +I+ G TG GKTTQ+P++L+EAGF S+ G IGVTQP
Sbjct: 53 FPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGF------SQHGMIGVTQP 106
Query: 94 RRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILLRELKA------ 147
R+VA ++ A+RVA E+ LG +VG+QVR D +IK+MTDG LL+ +
Sbjct: 107 RKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSK 166
Query: 148 -----LYEKQQQLLRSGQCIEPKDRVFP---------LKLILMSATLRVEDFISGGRLFR 193
L E ++ L + ++F LK+++MSAT+ + + F
Sbjct: 167 FSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSA---FFG 223
Query: 194 NPPIIEVPTRQFPVTVHFS-----KRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQR 248
N PI ++P R +PV F + E YI K M IH G ILVF+TGQ
Sbjct: 224 NCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQF 283
Query: 249 EVEYLCSKL 257
E+E C L
Sbjct: 284 EIEKSCELL 292
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 130/221 (58%), Gaps = 11/221 (4%)
Query: 439 VLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTGREKVKKYNSA 498
VLPL++ L A Q +VF+ G R ++STN+AETS+TI GI++VVD+G+ K Y+
Sbjct: 410 VLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQ 469
Query: 499 NGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCAEISKVPVDGV 558
++ + WIS+ASA QR GRAGRT PG C+RLY+ + ++ P + EI +V +D +
Sbjct: 470 AKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAP-YPVPEIRRVALDSL 528
Query: 559 VLLMKSMNIDKVSNFPFPTPPEVTALVEAERCLKALEALDSNGRLTALGKAMAHYPMSPR 618
VL MKSM++ FPF PP +L A L+ ALDS+ LT +G +A P+
Sbjct: 529 VLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVV 588
Query: 619 HSRMLLTLIQTMKVKSYARANLVLGYGVAAAAALSVSNPFV 659
+ML ++ +M ++ VL AAALSV +PF
Sbjct: 589 IGKML--ILGSM----FSLVEPVL----TIAAALSVQSPFT 619
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 41/255 (16%)
Query: 23 RPNEVENNRKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCS 82
R +++ R LPI I++ + ++ V++ G+TGCGK+TQVPQ+L AGF C
Sbjct: 151 RLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSHVAC- 209
Query: 83 SRSGRIGVTQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGDSCSIKFMTDGILL 142
TQPRR+A ++ AKRV FE G +VG+Q+R + + I F+T G+LL
Sbjct: 210 --------TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLL 261
Query: 143 RELK-----------ALYEKQQQLLRSGQCIEPKDRVFP----LKLILMSATLRVEDFIS 187
R+++ + E ++ L + + R+ P LK+ILMSAT+ + F S
Sbjct: 262 RQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSS 321
Query: 188 GGRLFRNPPIIEVPTRQFPVTVHF--------SKRTEIVDYIGQAYKKVM-SIHKRLP-- 236
F N P+++VP R FP+TV + + ++E +D + + +V+ SI + P
Sbjct: 322 ---YFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLD--PRPFLRVLESIDHKYPPE 376
Query: 237 -QGGILVFVTGQREV 250
+G +LVF++G E+
Sbjct: 377 ERGDLLVFLSGMAEI 391
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2
Length = 1380
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 117/199 (58%), Gaps = 3/199 (1%)
Query: 428 DNKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDT 487
+N G +LPL++ +P Q +VF+ V +G V++STN+AETS+TI + YV+D+
Sbjct: 674 NNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDS 733
Query: 488 GREKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSC 547
++KVK + + N + +Y W SK + QR GRAGR PG C+ L S A F+ L
Sbjct: 734 CKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDR-LETHMT 792
Query: 548 AEISKVPVDGVVLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTA 605
E+ + P+ + L +K + + + F PP + A++EAE L+ L+ALD+N LT
Sbjct: 793 PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLRELDALDANDELTP 852
Query: 606 LGKAMAHYPMSPRHSRMLL 624
LG+ +A P+ PR +M++
Sbjct: 853 LGRILAKLPIEPRFGKMMI 871
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 108/195 (55%), Gaps = 19/195 (9%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP+ E EI+EA++ NS VII G TGCGKTTQVPQ++ + ++R + I V
Sbjct: 387 RELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAA--ECNIVV 444
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD-SCSIKFMTDGILLRELKA-- 147
TQPRR++ +A A+RVA+E G GK G+ VR + + SI F T G+LLR+L+A
Sbjct: 445 TQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAGI 504
Query: 148 ----------LYEKQQQLLRSGQCIEPKDRVFP-LKLILMSATLRVEDFISGGRLFRNPP 196
++E+ + +P ++++LMSAT+ F F N P
Sbjct: 505 RGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFC---EYFFNCP 561
Query: 197 IIEVPTRQFPVTVHF 211
IIEV R FPV +F
Sbjct: 562 IIEVYGRTFPVQEYF 576
>sp|Q28141|DHX9_BOVIN ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1
Length = 1287
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 114/198 (57%), Gaps = 3/198 (1%)
Query: 429 NKRAGVGALCVLPLYAMLPAAAQLRVFEDVKEGERLVVVSTNVAETSLTIPGIKYVVDTG 488
N G +LPL++ +P Q +VF+ V G +++STN+AETS+TI + YV+D+
Sbjct: 670 NPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSC 729
Query: 489 REKVKKYNSANGIESYEIQWISKASAAQRAGRAGRTAPGHCYRLYSSAVFNNILPDFSCA 548
++KVK + + N + +Y W SK + QR GRAGR PG C+ L S A F L
Sbjct: 730 KQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFER-LETHMTP 788
Query: 549 EISKVPVDGVVLLMKSMNIDKVSNFPFPT--PPEVTALVEAERCLKALEALDSNGRLTAL 606
E+ + P+ + L +K + + + F PP + A++EAE L+ L+ALD+N LT L
Sbjct: 789 EMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPL 848
Query: 607 GKAMAHYPMSPRHSRMLL 624
G+ +A P+ PR +M++
Sbjct: 849 GRILAKLPIEPRFGKMMI 866
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 109/197 (55%), Gaps = 23/197 (11%)
Query: 31 RKDLPIVMMEQEIMEAVNDNSAVIICGETGCGKTTQVPQFLFEAGFGSNRCSSRSGRIGV 90
R+ LP+ E EI+EA++ N VII G TGCGKTTQVPQF+ + ++R + + I V
Sbjct: 382 RELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECN--IVV 439
Query: 91 TQPRRVAVLATAKRVAFELGLHLGKEVGFQVRHDKKIGD-SCSIKFMTDGILLRELKALY 149
TQPRR++ ++ A+RVA+E G GK G+ VR + + SI F T G+LLR+L+A
Sbjct: 440 TQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAGI 499
Query: 150 EKQQQLLRSGQCIEPKD--------------RVFP-LKLILMSATLRVEDFISGGRLFRN 194
++ I +D + +P ++++LMSAT+ F F N
Sbjct: 500 RGISHVIVDE--IHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCE---YFFN 554
Query: 195 PPIIEVPTRQFPVTVHF 211
PIIEV R FPV +F
Sbjct: 555 CPIIEVYGRTFPVQEYF 571
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 279,850,132
Number of Sequences: 539616
Number of extensions: 11975099
Number of successful extensions: 52100
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 49268
Number of HSP's gapped (non-prelim): 2404
length of query: 764
length of database: 191,569,459
effective HSP length: 125
effective length of query: 639
effective length of database: 124,117,459
effective search space: 79311056301
effective search space used: 79311056301
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)