BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038203
MGISREDGFDKKEKQVILIDERQSRGVNVMEHELLELEFWPVEHPLEPQDEDRPVKCPMP
SASSVINNDSRMEDQERIADSFRKRAEVPPDFSNREGIDVNIEPPIRAVRKRHHHSLTSD
DHNAQSLMRTPPHPPLQSQKITVLEMLQDFDKFES

High Scoring Gene Products

Symbol, full name Information P value
AT2G01913 protein from Arabidopsis thaliana 9.4e-11
AT1G31940 protein from Arabidopsis thaliana 3.6e-09
AT2G35585 protein from Arabidopsis thaliana 1.2e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038203
        (155 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1009023183 - symbol:AT2G01913 "AT2G01913" spec...   150  9.4e-11   1
TAIR|locus:2034441 - symbol:AT1G31940 species:3702 "Arabi...   135  3.6e-09   1
TAIR|locus:505006293 - symbol:AT2G35585 "AT2G35585" speci...   130  1.2e-08   1


>TAIR|locus:1009023183 [details] [associations]
            symbol:AT2G01913 "AT2G01913" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:DQ487505
            EMBL:BT030659 IPI:IPI00656586 RefSeq:NP_001030946.1
            UniGene:At.63224 EnsemblPlants:AT2G01913.1 GeneID:3768477
            KEGG:ath:AT2G01913 TAIR:At2g01913 OMA:MMEYDEE PhylomeDB:Q1G3S9
            Genevestigator:Q2V4B3 Uniprot:Q1G3S9
        Length = 138

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 44/145 (30%), Positives = 70/145 (48%)

Query:    20 DERQSRGVNVM-----EHELLELEFWPVEHPLEPQDEDRPVKCPMPSASSVINNDSRMED 74
             D+R+S    VM     E    ++EF PVEHP+EP++EDRPVKCP+P +SS+I+     + 
Sbjct:     7 DKRESVEETVMMEYDEETNQFDVEFCPVEHPIEPEEEDRPVKCPVPISSSLIH-----KP 61

Query:    75 QERIADSFRKRAEVPPDFSNREGIDVNIEPP----IRAVRKRHHHSLTSDDHNAQSLMRT 130
             +E+    + K              +  + PP    +R VRKRH+      ++N  +    
Sbjct:    62 KEKSKPGWVKH--------RASSYETPVYPPPRHHVRNVRKRHNSFDVEGNNNFFTRSHD 113

Query:   131 PPHPPLQSQKITVLEMLQDFDKFES 155
                   +   +T   +LQ   +FES
Sbjct:   114 DDETTSRRSNVTFYRVLQQVQEFES 138


>TAIR|locus:2034441 [details] [associations]
            symbol:AT1G31940 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005886 "plasma membrane"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            HOGENOM:HOG000239386 ProtClustDB:CLSN2688173 EMBL:AY069896
            EMBL:AY094031 EMBL:AY086420 IPI:IPI00542355 RefSeq:NP_564386.1
            UniGene:At.28437 EnsemblPlants:AT1G31940.1 GeneID:840084
            KEGG:ath:AT1G31940 TAIR:At1g31940 eggNOG:NOG307290
            InParanoid:Q8VYV3 OMA:RIWKERV PhylomeDB:Q8VYV3
            Genevestigator:Q8VYV3 Uniprot:Q8VYV3
        Length = 158

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 37/106 (34%), Positives = 58/106 (54%)

Query:    38 EFWPVEHPLEPQDEDRPVKCPMPSASSVINNDSRMEDQERIADSFRKRAE--VPPDFSNR 95
             EF PVEHP+EP D D P++CP+P  S  I ND R+  +ER++ S R++ +  +  D +  
Sbjct:    54 EFKPVEHPVEPLDNDLPIQCPLPEPS--ILNDGRIW-KERVSASMRRKGDLQIVKDEAAS 110

Query:    96 EGIDVNIEPPIRAVRKRHH-HSLTSDDHNAQSLMRT-PPHPPLQSQ 139
             E      +PP      R    SL++ +HN  +L+      PP+ S+
Sbjct:   111 ESDGSAPKPPRPPQPNRSILPSLSAPEHNLLNLLEECNAMPPVTSK 156


>TAIR|locus:505006293 [details] [associations]
            symbol:AT2G35585 "AT2G35585" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005314
            EMBL:AY088349 EMBL:BT024824 IPI:IPI00520981 RefSeq:NP_565808.1
            UniGene:At.37650 EnsemblPlants:AT2G35585.1 GeneID:818124
            KEGG:ath:AT2G35585 TAIR:At2g35585 eggNOG:NOG301730
            HOGENOM:HOG000239386 InParanoid:Q8S8M7 OMA:NLLEECK PhylomeDB:Q8S8M7
            ProtClustDB:CLSN2688173 ArrayExpress:Q8S8M7 Genevestigator:Q8S8M7
            Uniprot:Q8S8M7
        Length = 156

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 33/98 (33%), Positives = 56/98 (57%)

Query:    38 EFWPVEHPLEPQDEDRPVKCPMPSASSVINNDSRMEDQERIADSFRKRAE--VPPDFSNR 95
             EF PV+HP+EP D D+P++CP+P  S  I ND R+  +   A S R+R++  +  D  + 
Sbjct:    53 EFKPVDHPMEPLDNDQPIQCPLPEPS--ILNDGRLWKERVSASSMRRRSDLAIVQDGMDE 110

Query:    96 EGIDVNIEP-PIRAVRKRHHH----SLTSDDHNAQSLM 128
             E  DV++   P R  +   +     SL++ +H+  +L+
Sbjct:   111 ES-DVSVTSIPSRTSQCNTNRPILPSLSAPEHDLLNLL 147


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      155       155   0.00096  105 3  11 23  0.40    32
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  140 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.30u 0.11s 18.41t   Elapsed:  00:00:02
  Total cpu time:  18.30u 0.11s 18.41t   Elapsed:  00:00:02
  Start:  Fri May 10 20:15:13 2013   End:  Fri May 10 20:15:15 2013

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