BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038204
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RXS5|DRL40_ARATH Probable disease resistance protein At5g63020 OS=Arabidopsis
thaliana GN=At5g63020 PE=2 SV=2
Length = 888
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 75 FTNLEILRVYCCQNLIVL---LPSSSVSFRNLTDLQVWGCKELMKLVTSSTAKSLVRLRI 131
F + +I + +N VL +P+++ F NL+ + + C L L A +L LR+
Sbjct: 710 FADSDIWEIKVKRNETVLPLHIPTTTTFFPNLSQVSLEFCTRLRDLTWLIFAPNLTVLRV 769
Query: 132 MKVCGSRAMTQVVTSEKDGAEDEIVFSNLKALTLLDLDSLTSFCSGNYTFKFPSLRDLEV 191
+ + + +V+ EK ++ I F LK L L ++ L G FP L+ + V
Sbjct: 770 I---SASDLKEVINKEKAEQQNLIPFQELKELRLENVQMLKHIHRG--PLPFPCLQKILV 824
Query: 192 IGCPKMK 198
GC +++
Sbjct: 825 NGCSELR 831
>sp|Q9C8T9|DRL19_ARATH Putative disease resistance protein At1g63350 OS=Arabidopsis
thaliana GN=At1g63350 PE=2 SV=1
Length = 898
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 99 SFRNLTDLQVWGCKELMKLVTSSTAKSLVRLRIMKVCGSRAMTQVVTSEK--DGAEDEIV 156
SF +L ++ + C+ L +L A +L RL ++ S + ++ EK DG + IV
Sbjct: 733 SFSSLIEVNLSNCRRLRELTFLMFAPNLKRLHVV---SSNQLEDIINKEKAHDGEKSGIV 789
Query: 157 -FSNLKALTLLDLDSLTSFCSGNYTFKFPSLRDLEVIGCPKMK 198
F L L L +L L + FP L + V+GCP +K
Sbjct: 790 PFPKLNELHLYNLRELKNIYWS--PLPFPCLEKINVMGCPNLK 830
>sp|Q8L3R3|RFL1_ARATH Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1
PE=3 SV=2
Length = 885
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 99 SFRNLTDLQVWGCKELMKLVTSSTAKSLVRLRIMKVCGSRAMTQVVTSEKDGA--EDEIV 156
+F NL+++++ GC L L A +L+ LR V G + + +++ EK + E EI+
Sbjct: 741 NFSNLSNVRIEGCDGLKDLTWLLFAPNLINLR---VWGCKHLEDIISKEKAASVLEKEIL 797
Query: 157 -FSNLKALTLLDLDSLTSFCSGNYTFKFPSLRDLEVI-GCPKMK 198
F L+ L L L L S F LR L+++ CPK++
Sbjct: 798 PFQKLECLNLYQLSELKSIYWN--ALPFQRLRCLDILNNCPKLR 839
>sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana
GN=At3g14460 PE=3 SV=1
Length = 1424
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Query: 77 NLEILRVYCCQNLIVLLPSSSVSFRNLTDLQVWGCKELMKLVTSSTAKSLVRLRIMKVCG 136
NL+ L + C L L + + S+ NL +L + C L S +L L I + C
Sbjct: 1092 NLQSLHIDSCDGLTSLPENLTESYPNLHELLIIACHSLESFPGSHPPTTLKTLYI-RDCK 1150
Query: 137 SRAMTQVVTSEKDGAEDEIVF----------------SNLKALTLLDLDSLTSFC-SGNY 179
T+ + + ++ E +F L++L++ D +S +F
Sbjct: 1151 KLNFTESLQPTRSYSQLEYLFIGSSCSNLVNFPLSLFPKLRSLSIRDCESFKTFSIHAGL 1210
Query: 180 TFKFPSLRDLEVIGCPKMKIFTTGELCTP 208
+L LE+ CP ++ F G L TP
Sbjct: 1211 GDDRIALESLEIRDCPNLETFPQGGLPTP 1239
>sp|P60839|DRL2_ARATH Probable disease resistance protein At1g12290 OS=Arabidopsis
thaliana GN=At1g12290 PE=2 SV=1
Length = 884
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 96 SSVSFRNLTDLQVWGCKELMKLVTSSTAKSLVRLRIMKVCGSRAMTQVVTSEKDGAEDEI 155
+S F NL+ + + GC L L A +L L V SR + ++++ EK D +
Sbjct: 735 TSPCFPNLSKVLITGCNGLKDLTWLLFAPNLTHL---NVWNSRQIEEIISQEKASTADIV 791
Query: 156 VFSNLKALTLLDLDSLTSFCSGNYTFKFPSLRDLEV 191
F L+ L L DL L S FP L + V
Sbjct: 792 PFRKLEYLHLWDLPELKSIYWN--PLPFPCLNQINV 825
>sp|B2UVV4|EFTS_HELPS Elongation factor Ts OS=Helicobacter pylori (strain Shi470) GN=tsf
PE=3 SV=1
Length = 355
Score = 34.3 bits (77), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 100 FRNLTDLQVWGCKELMKLVTSSTAKSLVRLRIMKVCGSRAMTQVVTSEKDGAEDEIVFSN 159
R+LTD + CK+ + V K++ LR + + + +E G V +
Sbjct: 12 LRDLTDAGMMDCKKALVEVAGDLQKAIDFLREKGLSKAAKKADRIAAE--GVIALEVVPD 69
Query: 160 LKALTLLDLDSLTSFCSGNYTFKFPSLRDLEVIGCPKMKIFTTGELCTPPRVNVWYGE 217
K+ +++++S T F + N FK + LE I I TT EL P N + E
Sbjct: 70 FKSAMMVEINSETDFVAKNEGFKELVKKTLETIKA--HNIHTTEELLKSPLDNKPFEE 125
>sp|P55975|EFTS_HELPY Elongation factor Ts OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=tsf PE=3 SV=1
Length = 355
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 100 FRNLTDLQVWGCKELMKLVTSSTAKSLVRLRIMKVCGSRAMTQVVTSEKDGAEDEIVFSN 159
R+LTD + CK+ + V K++ LR + + + +E G V +
Sbjct: 12 LRDLTDAGMMDCKKALVEVAGDLQKAIDFLREKGLSKAAKKADRIAAE--GVVALEVAPD 69
Query: 160 LKALTLLDLDSLTSFCSGNYTFKFPSLRDLEVIGCPKMKIFTTGELCTPPRVNVWYGE 217
K+ +++++S T F + N FK + LE I I TT EL P N + E
Sbjct: 70 FKSAMIVEINSETDFVAKNEGFKELVKKTLETIKA--HNIHTTEELLKSPLDNKPFEE 125
>sp|Q9ZJ71|EFTS_HELPJ Elongation factor Ts OS=Helicobacter pylori (strain J99) GN=tsf
PE=3 SV=1
Length = 355
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 100 FRNLTDLQVWGCKELMKLVTSSTAKSLVRLRIMKVCGSRAMTQVVTSEKDGAEDEIVFSN 159
R+LTD + CK+ + V K++ LR + + + +E G V +
Sbjct: 12 LRDLTDAGMMDCKKALVEVAGDLQKAIDFLREKGLSKAAKKADRIAAE--GVVALEVAPD 69
Query: 160 LKALTLLDLDSLTSFCSGNYTFKFPSLRDLEVIGCPKMKIFTTGELCTPPRVNVWYGE 217
K+ +++++S T F + N FK + LE I I TT EL P N + E
Sbjct: 70 FKSAMMVEINSETDFVAKNEGFKELVKKTLETIKT--HNIHTTEELLKSPLDNKPFEE 125
>sp|Q38710|TPSDV_ABIGR Abietadiene synthase, chloroplastic OS=Abies grandis GN=AS PE=1
SV=1
Length = 868
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 23 LYLSRTSYT-EILSNEGHSEKHVGKFSQVKHLQPYKLNDLKQLWKQGSKLDFIFTNLEIL 81
++L +T Y +SNE + E F++V+ + +L DL++ WK D FT +
Sbjct: 529 VWLGKTVYMMPYISNEKYLELAKLDFNKVQSIHQTELQDLRRWWKSSGFTDLNFTRERVT 588
Query: 82 RVYCCQNLIVLLPSSS 97
+Y + P S
Sbjct: 589 EIYFSPASFIFEPEFS 604
>sp|Q2HJ90|LRC42_BOVIN Leucine-rich repeat-containing protein 42 OS=Bos taurus GN=LRRC42
PE=2 SV=1
Length = 428
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 99 SFRNLTDLQVWGCK-----ELMKLVTSSTAKSLVRLRIMKVC----GSRAMTQVVTSEKD 149
SFR LT L + CK EL++ +T+ S+ +LR+ C G R MT V K
Sbjct: 171 SFRELTCLDLSCCKLGDEHELLEHLTNEALSSVTQLRLKDNCLSDAGVRKMTAPVRVMKR 230
Query: 150 GAEDEIVFSNLKALTLLDLDSLTSFCSG--NYTFKFPSLRDLEVIG 193
G E+ L+LLDL Y F F L L++ G
Sbjct: 231 GLEN---------LSLLDLSCNPEITDAGIGYLFSFRKLNCLDISG 267
>sp|Q940K0|DRL15_ARATH Probable disease resistance protein At1g61180 OS=Arabidopsis
thaliana GN=At1g61180 PE=2 SV=2
Length = 889
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 100 FRNLTDLQVWGCKELMKLVTSSTAKSLVRLRIMKVCGSRAMTQVVTSEKDGAEDEIV-FS 158
F NL+ L++ C + L A +LV L I SR + +++ EK I F
Sbjct: 735 FTNLSRLEIMKCHSMKDLTWILFAPNLVVLLIE---DSREVGEIINKEKATNLTSITPFL 791
Query: 159 NLKALTLLDLDSLTSFCSGNYTFKFPSLRDLEVIGCPKMK 198
L+ L L +L L S FP L ++V CPK++
Sbjct: 792 KLEWLILYNLPKLESIYWS--PLPFPVLLTMDVSNCPKLR 829
>sp|Q6P5J6|LRC42_DANRE Leucine-rich repeat-containing protein 42 OS=Danio rerio GN=lrrc42
PE=2 SV=1
Length = 407
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 80 ILRVYCCQNLIVLLPS---SSVSFRNLTDLQVWGCK-----ELMKLVTSSTAKSLVRLRI 131
+L+ C +N +L+ F++L L ++GC+ EL K +TS SLV+L +
Sbjct: 138 VLKSLCLRNRYLLISERLEEIRQFQSLECLDLYGCRLGDNHELFKYITSEALSSLVKLFM 197
Query: 132 MKVCGSRAMTQVVTSEKDGAEDEIVFSNLKALTLLDL 168
C S A Q +T A ++ L+ L LLDL
Sbjct: 198 GANCLSDAGLQRLT-----APVRVMKKGLENLQLLDL 229
>sp|P08459|SPS2_YEAST Sporulation-specific protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SPS2 PE=1 SV=2
Length = 502
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 4/34 (11%)
Query: 159 NLKALTLLDLDSLTSFCSGNYTFKFPSLRDLEVI 192
NL++L L+LDSLTSF S FP+L+++E +
Sbjct: 168 NLESLGKLELDSLTSFVS----LDFPALKEVETV 197
>sp|Q9NR64|KLHL1_HUMAN Kelch-like protein 1 OS=Homo sapiens GN=KLHL1 PE=2 SV=1
Length = 748
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 85 CCQNLIVLL-PSSSVSFRNLTDLQVWGCKELMKLVTSSTAKSLVRL 129
CC L+ LL PS+ + R D Q GC ELMK+ S T ++++ +
Sbjct: 301 CCHFLMKLLHPSNCLGIRAFADAQ--GCIELMKVAHSYTMENIMEV 344
>sp|Q9JI74|KLHL1_MOUSE Kelch-like protein 1 OS=Mus musculus GN=Klhl1 PE=1 SV=2
Length = 751
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 85 CCQNLIVLL-PSSSVSFRNLTDLQVWGCKELMKLVTSSTAKSLVRL 129
CC L+ LL PS+ + R D Q GC ELMK+ S T ++++ +
Sbjct: 304 CCHFLMKLLHPSNCLGIRAFADAQ--GCIELMKVAHSYTMENIMEV 347
>sp|O64790|DRL17_ARATH Probable disease resistance protein At1g61300 OS=Arabidopsis
thaliana GN=At1g61300 PE=2 SV=2
Length = 762
Score = 31.6 bits (70), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 100 FRNLTDLQVWGCKELMKLVTSSTAKSLVRLRIMKVCGSRAMTQVVTSEKDGAEDEIV-FS 158
F NL+ L + C + L A +LV L I SR + +++ EK I F
Sbjct: 623 FTNLSRLGLSKCHSIKDLTWILFAPNLVYLYIED---SREVGEIINKEKATNLTSITPFL 679
Query: 159 NLKALTLLDLDSLTSFCSGNYTFKFPSLRDLEVIGCPKMKIFTTGELCTP 208
L+ L L +L L S FP L + V+ CPK++ P
Sbjct: 680 KLERLILYNLPKLESIYWS--PLHFPRLLIIHVLDCPKLRKLPLNATSVP 727
>sp|P0DI18|DRL45_ARATH Probable disease resistance protein RDL6 OS=Arabidopsis thaliana
GN=RDL6 PE=2 SV=1
Length = 1049
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 33/200 (16%)
Query: 10 PLGLLEKFRNLEILYLSRTSYT--EILSNEGHSEKHVGKFSQVKHLQPYKLNDLKQLWKQ 67
P+ +LEK L+ L L R S++ E++ + G F Q++ L L + + +
Sbjct: 793 PMPILEKLHQLKELELRRKSFSGKEMVCSSG-------GFPQLQKLSIKGLEEWEDWKVE 845
Query: 68 GSKLDFIFTNLEILRVYCCQNLIVL----LPSSSVSFRNLTDLQVWGCKELMKLVTSSTA 123
S + + T L + C+ L L LPS +LT + ++ C ++ T
Sbjct: 846 ESSMPVLHT----LDIRDCRKLKQLPDEHLPS------HLTSISLFFC--CLEEDPMPTL 893
Query: 124 KSLVRLRIMKVCGSRAMTQVVTSEKDGAEDEIVFSNLKALTLLDLDSLTSFCSGNYTFKF 183
+ LV L+ +++ +++ G F L L L +LD L + + +
Sbjct: 894 ERLVHLKELQLLFRSFSGRIMVCAGSG------FPQLHKLKLSELDGLEEWIVEDGSM-- 945
Query: 184 PSLRDLEVIGCPKMKIFTTG 203
P L LE+ CPK+K G
Sbjct: 946 PQLHTLEIRRCPKLKKLPNG 965
>sp|P0DI17|DRL11_ARATH Probable disease resistance protein RF9 OS=Arabidopsis thaliana
GN=RF9 PE=2 SV=1
Length = 1049
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 33/200 (16%)
Query: 10 PLGLLEKFRNLEILYLSRTSYT--EILSNEGHSEKHVGKFSQVKHLQPYKLNDLKQLWKQ 67
P+ +LEK L+ L L R S++ E++ + G F Q++ L L + + +
Sbjct: 793 PMPILEKLHQLKELELRRKSFSGKEMVCSSG-------GFPQLQKLSIKGLEEWEDWKVE 845
Query: 68 GSKLDFIFTNLEILRVYCCQNLIVL----LPSSSVSFRNLTDLQVWGCKELMKLVTSSTA 123
S + + T L + C+ L L LPS +LT + ++ C ++ T
Sbjct: 846 ESSMPVLHT----LDIRDCRKLKQLPDEHLPS------HLTSISLFFC--CLEEDPMPTL 893
Query: 124 KSLVRLRIMKVCGSRAMTQVVTSEKDGAEDEIVFSNLKALTLLDLDSLTSFCSGNYTFKF 183
+ LV L+ +++ +++ G F L L L +LD L + + +
Sbjct: 894 ERLVHLKELQLLFRSFSGRIMVCAGSG------FPQLHKLKLSELDGLEEWIVEDGSM-- 945
Query: 184 PSLRDLEVIGCPKMKIFTTG 203
P L LE+ CPK+K G
Sbjct: 946 PQLHTLEIRRCPKLKKLPNG 965
>sp|Q42484|RPS2_ARATH Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2
PE=1 SV=1
Length = 909
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 72/195 (36%), Gaps = 60/195 (30%)
Query: 58 LNDLKQLWKQGSKLDFIFTNLEILRVYCCQNLIVL-LPSSSVSFRNLTDLQVWGCKELMK 116
L LK L++ G+ + +++ L V C L+ LPS + RNL L + C +L
Sbjct: 677 LETLKTLFEFGA----LHKHIQHLHVEECNELLYFNLPSLTNHGRNLRRLSIKSCHDLEY 732
Query: 117 LVTS----------------------------------------------------STAK 124
LVT S +
Sbjct: 733 LVTPADFENDWLPSLEVLTLHSLHNLTRVWGNSVSQDCLRNIRCINISHCNKLKNVSWVQ 792
Query: 125 SLVRLRIMKVCGSRAMTQVVTS-EKDGAEDEIVFSNLKALTLLDLDSLTSFCSGNYTFKF 183
L +L ++++ R + ++++ E ED +F +LK L DL L S ++F+
Sbjct: 793 KLPKLEVIELFDCREIEELISEHESPSVEDPTLFPSLKTLRTRDLPELNSILPSRFSFQ- 851
Query: 184 PSLRDLEVIGCPKMK 198
+ L + CP++K
Sbjct: 852 -KVETLVITNCPRVK 865
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,603,845
Number of Sequences: 539616
Number of extensions: 3487190
Number of successful extensions: 6665
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 6655
Number of HSP's gapped (non-prelim): 38
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)