BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038206
(614 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/593 (66%), Positives = 470/593 (79%), Gaps = 9/593 (1%)
Query: 31 NNHSSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFAS-FADLDYAFRV 89
N+H + S C MSQLKQ+HA LRT P++ TL +Y +I+ +S F+D++YAFRV
Sbjct: 46 NHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRV 105
Query: 90 FYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLF 149
F IEN +SF WNTLIRACA V K +A +L+++M+E+G PDKHTFPF LKACAY+F
Sbjct: 106 FDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 165
Query: 150 AFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMID 209
FS+GKQ H I K G DVY+NN LIH Y SCG LDLA KVFD M ERSLVSWN MID
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID 225
Query: 210 AFVQFGEFDSALKLFRRMQILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSL 269
A V+FGE+DSAL+LFR MQ FEPDGYT QS+ SACAGL +LSLG WAHA++LR CD +
Sbjct: 226 ALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285
Query: 270 VTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDR 329
DVLV NSLI+MYCKCGSL +A QVF+ M KRDL SWN++ILGFA HGRAE A+ +FDR
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 345
Query: 330 LV-VEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLAR 388
+V E+ PNS+TFVG+L ACNHRG V++GR YFD+M+ +Y I P LEHYGC+VDL+AR
Sbjct: 346 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 405
Query: 389 AGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVI------ESEGGI 442
AG I EA+ +V +MPMKPDAVIWRSLLDACCKK ASV LSEE+A+ +I ES G
Sbjct: 406 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 465
Query: 443 CSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQ 502
CSG YVLLSRVYASA RWNDVG+VRKLM++ G+ KEPGCSSIEI+GI+HEFFAGDTSHPQ
Sbjct: 466 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQ 525
Query: 503 TKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDG-KQSSLRLHSERLAIALGILNLKP 561
TKQIY L +ID++L+S GY PD SQA +VD +DG K+ SLRLHSERLAIA G++NL P
Sbjct: 526 TKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPP 585
Query: 562 GMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
PIR+FKNLRVC DCHEVTKLIS++FN EIIVRDR RFHHFKDGSCSC+DYW
Sbjct: 586 QTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/576 (42%), Positives = 355/576 (61%), Gaps = 15/576 (2%)
Query: 45 SMSQLKQIHAQALRTAL----PQQHKTLLIYSRIIHFASFADLDYAFRVFYQIENP-NSF 99
S+++L+QIHA ++R + + K L+ Y ++ S + YA +VF +IE P N F
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFY--LVSLPSPPPMSYAHKVFSKIEKPINVF 86
Query: 100 TWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHA 159
WNTLIR A + A L++ M G V PD HT+PF +KA + G+ H+
Sbjct: 87 IWNTLIRGYAE-IGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 160 HIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDS 219
+ + G S +Y+ NSL+H YA+CG + A KVFD M E+ LV+WN +I+ F + G+ +
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 220 ALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNS 278
AL L+ M +PDG+T S+ SACA + L+LG H Y+++ L ++ +N
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV---GLTRNLHSSNV 262
Query: 279 LIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSP 338
L+D+Y +CG ++ A+ +F+ M ++ SW S+I+G A++G + A++ F + E P
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 339 NSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHL 398
ITFVG+L AC+H GMV EG +YF M EY I P +EH+GC+VDLLARAG + +A
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 382
Query: 399 VSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASAR 458
+ +MPM+P+ VIWR+LL AC H L+E Q+++ E SG YVLLS +YAS +
Sbjct: 383 IKSMPMQPNVVIWRTLLGACT-VHGDSDLAEFARIQILQLEPN-HSGDYVLLSNMYASEQ 440
Query: 459 RWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLK 518
RW+DV +RK M GV K PG S +E+ HEF GD SHPQ+ IY L + +L+
Sbjct: 441 RWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 500
Query: 519 SRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCH 578
S GY P S VD ++ K++++ HSE++AIA +++ PI V KNLRVC DCH
Sbjct: 501 SEGYVPQISN-VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCH 559
Query: 579 EVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
KL+S+++N EI+VRDR+RFHHFK+GSCSC DYW
Sbjct: 560 LAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/580 (40%), Positives = 359/580 (61%), Gaps = 17/580 (2%)
Query: 40 LTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFA----DLDYAFRVFYQIEN 95
+++C S+ +L QI A A+++ + + + +++I+F + + + YA +F +
Sbjct: 36 ISKCNSLRELMQIQAYAIKSHI----EDVSFVAKLINFCTESPTESSMSYARHLFEAMSE 91
Query: 96 PNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGK 155
P+ +N++ R +R + + LF ++E G +LPD +TFP LKACA A +G+
Sbjct: 92 PDIVIFNSMARGYSRFTNPL-EVFSLFVEILEDG-ILPDNYTFPSLLKACAVAKALEEGR 149
Query: 156 QAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFG 215
Q H K GL +VY+ +LI+ Y C +D A VFD ++E +V +N MI + +
Sbjct: 150 QLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRN 209
Query: 216 EFDSALKLFRRMQILF-EPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVL 274
+ AL LFR MQ + +P+ T S+ S+CA L +L LG W H Y +H S V
Sbjct: 210 RPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKH---SFCKYVK 266
Query: 275 VNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEE 334
VN +LIDM+ KCGSLD A +FE M +D +W+++I+ +A HG+AE ++ F+R+ E
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR-SE 325
Query: 335 SFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDE 394
+ P+ ITF+G+L+AC+H G V EGR YF M++++ I P ++HYG +VDLL+RAGN+++
Sbjct: 326 NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLED 385
Query: 395 ALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVY 454
A + +P+ P ++WR LL A C H ++ L+E+V++++ E + G YV+LS +Y
Sbjct: 386 AYEFIDKLPISPTPMLWRILL-AACSSHNNLDLAEKVSERIFELDDSH-GGDYVILSNLY 443
Query: 455 ASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLID 514
A ++W V +RK+M D+ K PGCSSIE++ + HEFF+GD T +++ LD +
Sbjct: 444 ARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMV 503
Query: 515 EKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVC 574
++LK GY PD S + D K+ +LR HSE+LAI G+LN PG IRV KNLRVC
Sbjct: 504 KELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 563
Query: 575 KDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
+DCH KLIS IF ++++RD RFHHF+DG CSC D+W
Sbjct: 564 RDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/617 (39%), Positives = 360/617 (58%), Gaps = 41/617 (6%)
Query: 31 NNHSSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFAD-LDYAFRV 89
+N +S L C +LKQIHA+ L+T L Q + + ++ +D L YA V
Sbjct: 12 HNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIV 71
Query: 90 FYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLF 149
F + P++F WN +IR + S D ++++L+QRM+ + + +TFP LKAC+ L
Sbjct: 72 FDGFDRPDTFLWNLMIRGFSCS-DEPERSLLLYQRML-CSSAPHNAYTFPSLLKACSNLS 129
Query: 150 AFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMID 209
AF + Q HA I K G +DVY NSLI+ YA G+ LA+ +FD + E VSWN +I
Sbjct: 130 AFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIK 189
Query: 210 AFVQFGEFDSALKLFRRM-------------------------QIL-------FEPDGYT 237
+V+ G+ D AL LFR+M Q+ EPD +
Sbjct: 190 GYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 238 FQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFE 297
+ SACA L L G W H+Y+ + + D ++ LIDMY KCG ++ A +VF+
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKT---RIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 298 SMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVS 357
++ K+ + +W ++I G+A HG A+ F + + PN ITF VL+AC++ G+V
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQ-KMGIKPNVITFTAVLTACSYTGLVE 365
Query: 358 EGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDA 417
EG+ F M +YN+ P +EHYGC+VDLL RAG +DEA + MP+KP+AVIW +LL A
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 418 CCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTK 477
C + H ++ L EE+ + +I + G YV + ++A ++W+ R+LM ++GV K
Sbjct: 426 C-RIHKNIELGEEIGEILIAIDP-YHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483
Query: 478 EPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDD 537
PGCS+I ++G HEF AGD SHP+ ++I ++ KL+ GY P+ + + DD
Sbjct: 484 VPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 543
Query: 538 GKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDR 597
+++ + HSE+LAI G++ KPG IR+ KNLRVCKDCH+VTKLIS+I+ +I++RDR
Sbjct: 544 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 603
Query: 598 ARFHHFKDGSCSCMDYW 614
RFHHF+DG CSC DYW
Sbjct: 604 TRFHHFRDGKCSCGDYW 620
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/552 (43%), Positives = 343/552 (62%), Gaps = 9/552 (1%)
Query: 65 HKTLLIYSRIIH-FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQ 123
H+ ++ Y+ +I +AS ++ A ++F +I + +WN +I A + + K +A+ LF+
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK-EALELFK 255
Query: 124 RMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASC 183
M++ NV PD+ T + ACA + G+Q H I G S++ I N+LI Y+ C
Sbjct: 256 DMMKT-NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC 314
Query: 184 GHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILFE-PDGYTFQSIT 242
G L+ A +F+ + + ++SWN +I + + AL LF+ M E P+ T SI
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 243 SACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKR 302
ACA L + +G W H YI + + + SLIDMY KCG ++ A QVF S+ +
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 303 DLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDY 362
L+SWN++I GFA+HGRA+A+ F R+ + P+ ITFVG+LSAC+H GM+ GR
Sbjct: 434 SLSSWNAMIFGFAMHGRADASFDLFSRMR-KIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Query: 363 FDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKH 422
F M +Y +TP LEHYGC++DLL +G EA +++ M M+PD VIW SLL AC K H
Sbjct: 493 FRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC-KMH 551
Query: 423 ASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCS 482
+V L E A+ +I+ E G YVLLS +YASA RWN+V R L+ DKG+ K PGCS
Sbjct: 552 GNVELGESFAENLIKIEPE-NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 610
Query: 483 SIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSS 542
SIEID + HEF GD HP+ ++IYG L+ ++ L+ G+ PD S+ E ++ K+ +
Sbjct: 611 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEME-EEWKEGA 669
Query: 543 LRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHH 602
LR HSE+LAIA G+++ KPG + + KNLRVC++CHE TKLIS+I+ EII RDR RFHH
Sbjct: 670 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHH 729
Query: 603 FKDGSCSCMDYW 614
F+DG CSC DYW
Sbjct: 730 FRDGVCSCNDYW 741
Score = 219 bits (557), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 216/425 (50%), Gaps = 50/425 (11%)
Query: 29 SFNNHSSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHF----ASFADLD 84
S NH SL S L CK++ L+ IHAQ ++ L H T S++I F F L
Sbjct: 30 SIRNHPSL-SLLHNCKTLQSLRIIHAQMIKIGL---HNTNYALSKLIEFCILSPHFEGLP 85
Query: 85 YAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKA 144
YA VF I+ PN WNT+ R A S D A+ L+ MI G +LP+ +TFPF LK+
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPV-SALKLYVCMISLG-LLPNSYTFPFVLKS 143
Query: 145 CAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHF------------------------- 179
CA AF +G+Q H H+ K G D+Y++ SLI
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 180 ------YASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFR-RMQILFE 232
YAS G+++ A K+FD + + +VSWN MI + + G + AL+LF+ M+
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 233 PDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIA 292
PD T ++ SACA ++ LG H +I DH +++ + N+LID+Y KCG L+ A
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWI---DDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 293 RQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNH 352
+FE +P +D+ SWN++I G+ + AL F + + +PN +T + +L AC H
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM-LRSGETPNDVTMLSILPACAH 379
Query: 353 RGMVSEGRDYFDVMINE--YNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVI 410
G + GR + V I++ +T L+D+ A+ G+I EA H V N +
Sbjct: 380 LGAIDIGR-WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI-EAAHQVFNSILHKSLSS 437
Query: 411 WRSLL 415
W +++
Sbjct: 438 WNAMI 442
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/631 (37%), Positives = 357/631 (56%), Gaps = 62/631 (9%)
Query: 36 LLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADL-----DYAFRVF 90
L + C+++ L QIHA +++ Q + L + I+ F + +DL DYA ++F
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSG---QMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 91 YQIENPNSFTWNTLIRACARSVDAKPQ-AIVLFQRMIEQGNVLPDKHTFPFALKACAYLF 149
Q+ N F+WNT+IR + S + K AI LF M+ V P++ TFP LKACA
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 150 AFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLD---------------------- 187
+GKQ H K G D ++ ++L+ Y CG +
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 188 -----------------------LANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLF 224
A +FD M +RS+VSWN MI + G F A+++F
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 225 RRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMY 283
R M+ P+ T S+ A + L +L LG W H Y D + D ++ ++LIDMY
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAE---DSGIRIDDVLGSALIDMY 319
Query: 284 CKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITF 343
KCG ++ A VFE +P+ ++ +W+++I GFA+HG+A A+ F ++ + P+ + +
Sbjct: 320 SKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAY 378
Query: 344 VGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMP 403
+ +L+AC+H G+V EGR YF M++ + P +EHYGC+VDLL R+G +DEA + NMP
Sbjct: 379 INLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP 438
Query: 404 MKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDV 463
+KPD VIW++LL AC + +V + + VA +++ SG YV LS +YAS W++V
Sbjct: 439 IKPDDVIWKALLGAC-RMQGNVEMGKRVANILMDMVPHD-SGAYVALSNMYASQGNWSEV 496
Query: 464 GLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYT 523
+R M +K + K+PGCS I+IDG+ HEF D SHP+ K+I L I +KL+ GY
Sbjct: 497 SEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYR 556
Query: 524 PDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKL 583
P +Q + E +D K++ L HSE++A A G+++ PG PIR+ KNLR+C+DCH KL
Sbjct: 557 PITTQVLLNLEEED-KENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKL 615
Query: 584 ISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
IS+++ +I VRDR RFHHF+DGSCSCMDYW
Sbjct: 616 ISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/613 (39%), Positives = 352/613 (57%), Gaps = 54/613 (8%)
Query: 40 LTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIH--FASFADLDYAFRVFYQIENPN 97
+ + +S+ ++ QIHA LR L H + + +H +AS + ++ +F+Q +P+
Sbjct: 36 IDKSQSVDEVLQIHAAILRHNL-LLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94
Query: 98 SFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQA 157
F + I + + K QA +L+ +++ + P++ TF LK+C+ GK
Sbjct: 95 LFLFTAAINTASIN-GLKDQAFLLYVQLLSS-EINPNEFTFSSLLKSCST----KSGKLI 148
Query: 158 HAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVS-------------- 203
H H+ K GL D Y+ L+ YA G + A KVFD M ERSLVS
Sbjct: 149 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 208
Query: 204 -----------------WNVMIDAFVQFGEFDSALKLFRRM--QILFEPDGYTFQSITSA 244
WNVMID + Q G + AL LF+++ + +PD T + SA
Sbjct: 209 EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSA 268
Query: 245 CAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDL 304
C+ + L G W H ++ + +V V LIDMY KCGSL+ A VF P++D+
Sbjct: 269 CSQIGALETGRWIHVFVK---SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
Query: 305 TSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFD 364
+WN++I G+A+HG ++ AL+ F+ + P ITF+G L AC H G+V+EG F+
Sbjct: 326 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 385
Query: 365 VMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHAS 424
M EY I P +EHYGCLV LL RAG + A + NM M D+V+W S+L + CK H
Sbjct: 386 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGS-CKLHGD 444
Query: 425 VVLSEEVAKQVIESEGGI---CSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGC 481
VL +E+A+ +I G+ SG+YVLLS +YAS + V VR LM +KG+ KEPG
Sbjct: 445 FVLGKEIAEYLI----GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 482 SSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQS 541
S+IEI+ HEF AGD H ++K+IY L I E++KS GY P+ + + D + K+
Sbjct: 501 STIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPN-TNTVLQDLEETEKEQ 559
Query: 542 SLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFH 601
SL++HSERLAIA G+++ KPG P+++FKNLRVC DCH VTKLIS+I +I++RDR RFH
Sbjct: 560 SLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFH 619
Query: 602 HFKDGSCSCMDYW 614
HF DGSCSC D+W
Sbjct: 620 HFTDGSCSCGDFW 632
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/558 (39%), Positives = 335/558 (60%), Gaps = 49/558 (8%)
Query: 98 SFTWNTLIRACARSVDAKPQ---AIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQG 154
SF WN +IRA +V + PQ I ++ RM V PD HTFPF L + G
Sbjct: 24 SFLWNIIIRAIVHNVSS-PQRHSPISVYLRM-RNHRVSPDFHTFPFLLPSFHNPLHLPLG 81
Query: 155 KQAHAHIFKRGLVSDVYINNSLIHFYASCGHL---------------------------- 186
++ HA I GL D ++ SL++ Y+SCG L
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 187 ---DLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQI------LFEPDGYT 237
D A K+FD M ER+++SW+ +I+ +V G++ AL LFR MQ+ P+ +T
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 238 FQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFE 297
++ SAC L L G W HAYI ++ + D+++ +LIDMY KCGSL+ A++VF
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKY---HVEIDIVLGTALIDMYAKCGSLERAKRVFN 258
Query: 298 SM-PKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMV 356
++ K+D+ +++++I A++G + + F + ++ +PNS+TFVG+L AC HRG++
Sbjct: 259 ALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLI 318
Query: 357 SEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLD 416
+EG+ YF +MI E+ ITP ++HYGC+VDL R+G I EA +++MPM+PD +IW SLL
Sbjct: 319 NEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 378
Query: 417 ACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVT 476
+ + E K++IE + + SG YVLLS VYA RW +V +R M KG+
Sbjct: 379 G-SRMLGDIKTCEGALKRLIELD-PMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGIN 436
Query: 477 KEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELD 536
K PGCS +E++G+ HEF GD S ++++IY LD I ++L+ GY D ++ ++D +
Sbjct: 437 KVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTD-TKEVLLDLNE 495
Query: 537 DGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRD 596
K+ +L HSE+LAIA ++ +PG P+R+ KNLR+C DCH V K+IS++F+ EI+VRD
Sbjct: 496 KDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRD 555
Query: 597 RARFHHFKDGSCSCMDYW 614
RFHHF+DGSCSC D+W
Sbjct: 556 CNRFHHFRDGSCSCRDFW 573
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 17/330 (5%)
Query: 34 SSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQI 93
+SLL+ + C + +++ + LP + + Y++ +D A ++F ++
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA------GLIDDARKLFDEM 154
Query: 94 ENPNSFTWNTLIRACARSVDAKPQAIVLFQRM----IEQGNVLPDKHTFPFALKACAYLF 149
N +W+ LI K +A+ LF+ M + V P++ T L AC L
Sbjct: 155 PERNVISWSCLINGYVMCGKYK-EALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 150 AFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNM-LERSLVSWNVMI 208
A QGK HA+I K + D+ + +LI YA CG L+ A +VF+ + ++ + +++ MI
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 209 DAFVQFGEFDSALKLFRRMQIL--FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCD 266
+G D +LF M P+ TF I AC ++ G ++ +
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE--E 331
Query: 267 HSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMP-KRDLTSWNSIILGFALHGRAEAALK 325
+ + ++D+Y + G + A SMP + D+ W S++ G + G +
Sbjct: 332 FGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEG 391
Query: 326 YFDRLVVEESFSPNSITFVGVLSACNHRGM 355
RL+ + + + + + A R M
Sbjct: 392 ALKRLIELDPMNSGAYVLLSNVYAKTGRWM 421
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/580 (37%), Positives = 350/580 (60%), Gaps = 15/580 (2%)
Query: 40 LTECKSMSQLKQIHAQALRTALPQQHKTLL--IYSRIIHFASFADLDYAFRVFYQIENPN 97
L C ++ + KQ+HA+ ++ +L + ++ H ++YA +F I++P
Sbjct: 37 LKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPC 96
Query: 98 SFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQA 157
+F +NT+IR +V + +A+ + M+++GN PD T+P LKAC L + +GKQ
Sbjct: 97 TFDFNTMIRGYV-NVMSFEEALCFYNEMMQRGNE-PDNFTYPCLLKACTRLKSIREGKQI 154
Query: 158 HAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEF 217
H +FK GL +DV++ NSLI+ Y CG ++L++ VF+ + ++ SW+ M+ A G +
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMW 214
Query: 218 DSALKLFRRM--QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLV 275
L LFR M + + + S ACA L+LGM H ++LR+ +++V
Sbjct: 215 SECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISE---LNIIV 271
Query: 276 NNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEES 335
SL+DMY KCG LD A +F+ M KR+ +++++I G ALHG E+AL+ F +++ +E
Sbjct: 272 QTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI-KEG 330
Query: 336 FSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEA 395
P+ + +V VL+AC+H G+V EGR F M+ E + P EHYGCLVDLL RAG ++EA
Sbjct: 331 LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEA 390
Query: 396 LHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYA 455
L + ++P++ + VIWR+ L C + ++ L + A+++++ G Y+L+S +Y+
Sbjct: 391 LETIQSIPIEKNDVIWRTFLSQC-RVRQNIELGQIAAQELLKLSSHN-PGDYLLISNLYS 448
Query: 456 SARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDE 515
+ W+DV R + KG+ + PG S +E+ G H F + D SHP+ K+IY L ++
Sbjct: 449 QGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEW 508
Query: 516 KLKSRGYTPDYSQAAM-VDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVC 574
+LK GY+PD +Q + VDE + K+ L+ HS+++AIA G+L PG I++ +NLR+C
Sbjct: 509 QLKFEGYSPDLTQILLNVDE--EEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMC 566
Query: 575 KDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
DCH TK IS I+ EI+VRDR RFH FK G+CSC DYW
Sbjct: 567 SDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 140/288 (48%), Gaps = 7/288 (2%)
Query: 26 NEGSFNNHSSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDY 85
NE + LL + T KS+ + KQIH Q + L + + S I + +++
Sbjct: 128 NEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGL--EADVFVQNSLINMYGRCGEMEL 185
Query: 86 AFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKAC 145
+ VF ++E+ + +W++++ A A + + ++LF+ M + N+ ++ AL AC
Sbjct: 186 SSAVFEKLESKTAASWSSMVSARA-GMGMWSECLLLFRGMCSETNLKAEESGMVSALLAC 244
Query: 146 AYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWN 205
A A + G H + + ++ + SL+ Y CG LD A +F M +R+ ++++
Sbjct: 245 ANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYS 304
Query: 206 VMIDAFVQFGEFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRH 264
MI GE +SAL++F +M + EPD + S+ +AC+ + G A +L+
Sbjct: 305 AMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLK- 363
Query: 265 CDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMP-KRDLTSWNSII 311
+ + L+D+ + G L+ A + +S+P +++ W + +
Sbjct: 364 -EGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/603 (38%), Positives = 344/603 (57%), Gaps = 41/603 (6%)
Query: 45 SMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIENPNSFTWNTL 104
+ +++QIHA+ + + + + + + LDYA ++ + E P F N++
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 105 IRACARSVDAKPQAIVLFQRMIEQGNVL-PDKHTFPFALKACAYLFAFSQGKQAHAHIFK 163
IRA +S ++ ++R++ GN L PD +T F ++AC L G Q H +
Sbjct: 78 IRAHCKS-PVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIR 136
Query: 164 RGLVSDVYINNSLIHFYASCGHLD-------------------------------LANKV 192
RG +D ++ LI YA G LD A K+
Sbjct: 137 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKL 196
Query: 193 FDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATL 251
F+ M ER ++WN MI + Q GE AL +F MQ+ + +G S+ SAC L L
Sbjct: 197 FEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL 256
Query: 252 SLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSII 311
G WAH+YI R+ + V + +L+D+Y KCG ++ A +VF M ++++ +W+S +
Sbjct: 257 DQGRWAHSYIERN---KIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSAL 313
Query: 312 LGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYN 371
G A++G E L+ F L+ ++ +PN++TFV VL C+ G V EG+ +FD M NE+
Sbjct: 314 NGLAMNGFGEKCLELFS-LMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFG 372
Query: 372 ITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEV 431
I P LEHYGCLVDL ARAG +++A+ ++ MPMKP A +W SLL A + + ++ L
Sbjct: 373 IEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHAS-RMYKNLELGVLA 431
Query: 432 AKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAH 491
+K+++E E G YVLLS +YA + W++V VR+ M KGV K+PGCS +E++G H
Sbjct: 432 SKKMLELETA-NHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVH 490
Query: 492 EFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLA 551
EFF GD SHP+ QI I +L+ GY D + M D ++ K+ +L LHSE+ A
Sbjct: 491 EFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKAD-TTPVMFDIDEEEKEDALCLHSEKAA 549
Query: 552 IALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCM 611
IA GI++LK +PIR+ KNLRVC DCH+V+ +IS+IFN EIIVRDR RFHHFKDG CSC
Sbjct: 550 IAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCN 609
Query: 612 DYW 614
+W
Sbjct: 610 GFW 612
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/613 (36%), Positives = 353/613 (57%), Gaps = 45/613 (7%)
Query: 36 LLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIH-FASFADLDYAFRVFYQIE 94
L+ + E S+S + +H A+++A+ + + + +IH + S DLD A +VF I+
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSD---VFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 95 NPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQG 154
+ +WN++I + + +A+ LF++M E +V T L ACA + G
Sbjct: 194 EKDVVSWNSMINGFVQK-GSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFG 251
Query: 155 KQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERS-------------- 200
+Q ++I + + ++ + N+++ Y CG ++ A ++FD M E+
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 201 -----------------LVSWNVMIDAFVQFGEFDSALKLFRRMQIL--FEPDGYTFQSI 241
+V+WN +I A+ Q G+ + AL +F +Q+ + + T S
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371
Query: 242 TSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPK 301
SACA + L LG W H+YI +H + + V ++LI MY KCG L+ +R+VF S+ K
Sbjct: 372 LSACAQVGALELGRWIHSYIKKH---GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK 428
Query: 302 RDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRD 361
RD+ W+++I G A+HG A+ F ++ E + PN +TF V AC+H G+V E
Sbjct: 429 RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ-EANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 362 YFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKK 421
F M + Y I P +HY C+VD+L R+G +++A+ + MP+ P +W +LL AC K
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC-KI 546
Query: 422 HASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGC 481
HA++ L+E +++E E G +VLLS +YA +W +V +RK M G+ KEPGC
Sbjct: 547 HANLNLAEMACTRLLELEPR-NDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 605
Query: 482 SSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQS 541
SSIEIDG+ HEF +GD +HP ++++YG L + EKLKS GY P+ SQ + E ++ K+
Sbjct: 606 SSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQ 665
Query: 542 SLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFH 601
SL LHSE+LAI G+++ + IRV KNLRVC DCH V KLIS++++ EIIVRDR RFH
Sbjct: 666 SLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFH 725
Query: 602 HFKDGSCSCMDYW 614
HF++G CSC D+W
Sbjct: 726 HFRNGQCSCNDFW 738
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 218/430 (50%), Gaps = 38/430 (8%)
Query: 18 HSIFNNNRNEGSFNNHSSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHF 77
H F+N + N S +S + C S+ QLKQ H +RT + +
Sbjct: 15 HPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAAL 74
Query: 78 ASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHT 137
+SFA L+YA +VF +I PNSF WNTLIRA A D +I F M+ + P+K+T
Sbjct: 75 SSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDP-VLSIWAFLDMVSESQCYPNKYT 133
Query: 138 FPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNML 197
FPF +KA A + + S G+ H K + SDV++ NSLIH Y SCG LD A KVF +
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 198 ERSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMW 256
E+ +VSWN MI+ FVQ G D AL+LF++M+ + T + SACA + L G
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 253
Query: 257 AHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSL--------------------------- 289
+YI ++ + ++ + N+++DMY KCGS+
Sbjct: 254 VCSYIE---ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310
Query: 290 ----DIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVG 345
+ AR+V SMP++D+ +WN++I + +G+ AL F L ++++ N IT V
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 346 VLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMK 405
LSAC G + GR + I ++ I L+ + ++ G+++++ V N K
Sbjct: 371 TLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE-VFNSVEK 428
Query: 406 PDAVIWRSLL 415
D +W +++
Sbjct: 429 RDVFVWSAMI 438
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 210/474 (44%), Gaps = 55/474 (11%)
Query: 19 SIFNNNRNEGSFNNHSSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFA 78
S NR + +++L T+C S+ K++ ++ + + + +A
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM------EEKDNVTWTTMLDGYA 309
Query: 79 SFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKP-QAIVLFQRMIEQGNVLPDKHT 137
D + A V + + WN LI A + + KP +A+++F + Q N+ ++ T
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQ--NGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 138 FPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNML 197
L ACA + A G+ H++I K G+ + ++ ++LIH Y+ CG L+ + +VF+++
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 198 ERSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMW 256
+R + W+ MI G + A+ +F +MQ +P+G TF ++ AC+ G+
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS-----HTGLV 482
Query: 257 AHAYILRH---CDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTS-WNSIIL 312
A L H ++ +V + ++D+ + G L+ A + E+MP TS W +++
Sbjct: 483 DEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLG 542
Query: 313 GFALHGRAEAALKYFDRLVVEESFSPNS-ITFVGVLSACNHRGMVSEGRDYF-------- 363
+H A RL+ E + + + + + VSE R +
Sbjct: 543 ACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKE 602
Query: 364 --------DVMINEY----NITPVLEH-YGCLVDLLARAGN------IDEALHLVSNMPM 404
D MI+E+ N P+ E YG L +++ + + I + L ++ M
Sbjct: 603 PGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEM 662
Query: 405 KPDAVIWRSLLDACCKKHASVVLSEEVAK--QVIES--EGGICSGVYVLLSRVY 454
K ++ S A C ++S E K +VI++ G C V L+S++Y
Sbjct: 663 KEQSLNLHSEKLAICYG----LISTEAPKVIRVIKNLRVCGDCHSVAKLISQLY 712
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/584 (39%), Positives = 345/584 (59%), Gaps = 16/584 (2%)
Query: 36 LLSSLTECKSMS--QLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQI 93
+LS L S QLK+IHA LRT + K L+ + + D+ YA +VF ++
Sbjct: 12 MLSELLRASSSKPKQLKKIHAIVLRTGFSE--KNSLLTQLLENLVVIGDMCYARQVFDEM 69
Query: 94 ENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQ 153
P F WNTL + R+ ++++L+++M + G V PD+ T+PF +KA + L FS
Sbjct: 70 HKPRIFLWNTLFKGYVRN-QLPFESLLLYKKMRDLG-VRPDEFTYPFVVKAISQLGDFSC 127
Query: 154 GKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQ 213
G HAH+ K G + L+ Y G L A +F++M + LV+WN + VQ
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQ 187
Query: 214 FGEFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTD 272
G AL+ F +M + D +T S+ SAC L +L +G + R + +
Sbjct: 188 TGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYD---RARKEEIDCN 244
Query: 273 VLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVV 332
++V N+ +DM+ KCG+ + AR +FE M +R++ SW+++I+G+A++G + AL F +
Sbjct: 245 IIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ- 303
Query: 333 EESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMI--NEYNITPVLEHYGCLVDLLARAG 390
E PN +TF+GVLSAC+H G+V+EG+ YF +M+ N+ N+ P EHY C+VDLL R+G
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSG 363
Query: 391 NIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLL 450
++EA + MP++PD IW +LL AC H ++L ++VA ++E+ I S +VLL
Sbjct: 364 LLEEAYEFIKKMPVEPDTGIWGALLGACAV-HRDMILGQKVADVLVETAPDIGS-YHVLL 421
Query: 451 SRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFL 510
S +YA+A +W+ V VR M G K SS+E +G H F GD SHPQ+K IY L
Sbjct: 422 SNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKL 481
Query: 511 DLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKN 570
D I +K++ GY PD E+++ K+ SL HSE+LAIA G++ +PG PIRV KN
Sbjct: 482 DEILKKIRKMGYVPDTCSVFHDVEMEE-KECSLSHHSEKLAIAFGLIKGRPGHPIRVMKN 540
Query: 571 LRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
LR C DCH +K +S + + EII+RD+ RFHHF++G CSC ++W
Sbjct: 541 LRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/594 (37%), Positives = 351/594 (59%), Gaps = 22/594 (3%)
Query: 34 SSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQI 93
SS+L + + + + K++HA AL+ ++ + + + + + + + RVF +
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDEN-SFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 94 ENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQ 153
+ WN +I +++ K +A++LF M E +L + T + AC AFS+
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDK-EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 154 GKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQ 213
+ H + KRGL D ++ N+L+ Y+ G +D+A ++F M +R LV+WN MI +V
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 214 FGEFDSALKLFRRMQIL------------FEPDGYTFQSITSACAGLATLSLGMWAHAYI 261
+ AL L +MQ L +P+ T +I +CA L+ L+ G HAY
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 262 LRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAE 321
+++ +L TDV V ++L+DMY KCG L ++R+VF+ +P++++ +WN II+ + +HG +
Sbjct: 544 IKN---NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 322 AALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGC 381
A+ R+++ + PN +TF+ V +AC+H GMV EG F VM +Y + P +HY C
Sbjct: 601 EAIDLL-RMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 382 LVDLLARAGNIDEALHLVSNMPMKPD-AVIWRSLLDACCKKHASVVLSEEVAKQVIESEG 440
+VDLL RAG I EA L++ MP + A W SLL A + H ++ + E A+ +I+ E
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGAS-RIHNNLEIGEIAAQNLIQLEP 718
Query: 441 GICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSH 500
+ S YVLL+ +Y+SA W+ VR+ M ++GV KEPGCS IE H+F AGD+SH
Sbjct: 719 NVASH-YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSH 777
Query: 501 PQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLK 560
PQ++++ G+L+ + E+++ GY PD S + + +D K+ L HSE+LAIA GILN
Sbjct: 778 PQSEKLSGYLETLWERMRKEGYVPDTS-CVLHNVEEDEKEILLCGHSEKLAIAFGILNTS 836
Query: 561 PGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
PG IRV KNLRVC DCH TK IS+I + EII+RD RFH FK+G+CSC DYW
Sbjct: 837 PGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 184/389 (47%), Gaps = 20/389 (5%)
Query: 35 SLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIE 94
+LL ++ + + M KQIHA + T+ + + + D ++VF +I
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTV-ANTLVNLYRKCGDFGAVYKVFDRIS 160
Query: 95 NPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYL---FAF 151
N +WN+LI + S + A+ F+ M+++ NV P T + AC+ L
Sbjct: 161 ERNQVSWNSLISSLC-SFEKWEMALEAFRCMLDE-NVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 152 SQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAF 211
GKQ HA+ ++G ++ +I N+L+ Y G L + + + R LV+WN ++ +
Sbjct: 219 MMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 212 VQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLV 270
Q + AL+ R M + EPD +T S+ AC+ L L G HAY L+ + SL
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK--NGSLD 335
Query: 271 TDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRL 330
+ V ++L+DMYC C + R+VF+ M R + WN++I G++ + + AL F +
Sbjct: 336 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Query: 331 VVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEH----YGCLVDLL 386
NS T GV+ AC G S I+ + + L+ L+D+
Sbjct: 396 EESAGLLANSTTMAGVVPACVRSGAFSRKE-----AIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 387 ARAGNIDEALHLVSNMPMKPDAVIWRSLL 415
+R G ID A+ + M + D V W +++
Sbjct: 451 SRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 141/266 (53%), Gaps = 12/266 (4%)
Query: 101 WNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAH 160
W L+R+ RS + +A++ + MI G + PD + FP LKA A L GKQ HAH
Sbjct: 65 WIDLLRSKVRS-NLLREAVLTYVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQIHAH 122
Query: 161 IFKRGL-VSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDS 219
++K G V V + N+L++ Y CG KVFD + ER+ VSWN +I + F +++
Sbjct: 123 VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182
Query: 220 ALKLFRRM-QILFEPDGYTFQSITSACAGLAT---LSLGMWAHAYILRHCDHSLVTDVLV 275
AL+ FR M EP +T S+ +AC+ L L +G HAY LR + + +
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE----LNSFI 238
Query: 276 NNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEES 335
N+L+ MY K G L ++ + S RDL +WN+++ + + AL+Y +V+ E
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL-EG 297
Query: 336 FSPNSITFVGVLSACNHRGMVSEGRD 361
P+ T VL AC+H M+ G++
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKE 323
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 10/243 (4%)
Query: 199 RSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWA 257
RS W ++ + V+ A+ + M +L +PD Y F ++ A A L + LG
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 258 HAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALH 317
HA++ + V V V N+L+++Y KCG +VF+ + +R+ SWNS+I
Sbjct: 120 HAHVYKFGYG--VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 318 GRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGM---VSEGRDYFDVMINEYNITP 374
+ E AL+ F R +++E+ P+S T V V++AC++ M + G+ + + +
Sbjct: 178 EKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS 236
Query: 375 VLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQ 434
+ LV + + G + + L+ + + D V W ++L + C+ + E + +
Sbjct: 237 FI--INTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 435 VIE 437
V+E
Sbjct: 294 VLE 296
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/619 (37%), Positives = 353/619 (57%), Gaps = 53/619 (8%)
Query: 37 LSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHF----ASFAD----LDYAFR 88
L+ L C S S LK IH LRT L + + SR++ ++F L YA+
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISD---VFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 89 VFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYL 148
+F QI+NPN F +N LIR S A+P F + + + PD TFPF +KA + +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCF--STGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM 130
Query: 149 FAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMI 208
G+Q H+ I + G +DVY+ NSL+H YA+CG + A ++F M R +VSW M+
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 209 DAFVQFGEFDSALKLFRRM--QILFE----PDGY-------------------------- 236
+ + G ++A ++F M + LF +GY
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 237 TFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVF 296
S+ S+CA L L G A+ Y+++ + ++++ +L+DM+ +CG ++ A VF
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKS---HMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 297 ESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMV 356
E +P+ D SW+SII G A+HG A A+ YF +++ F P +TF VLSAC+H G+V
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMI-SLGFIPRDVTFTAVLSACSHGGLV 366
Query: 357 SEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLD 416
+G + ++ M ++ I P LEHYGC+VD+L RAG + EA + + M +KP+A I +LL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 417 ACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVT 476
AC K + + ++E V +I+ + SG YVLLS +YA A +W+ + +R +M +K V
Sbjct: 427 AC-KIYKNTEVAERVGNMLIKVKPE-HSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVK 484
Query: 477 KEPGCSSIEIDGIAHEFFAGD-TSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDEL 535
K PG S IEIDG ++F GD HP+ +I + I K++ GY + + A D
Sbjct: 485 KPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGN-TGDAFFDVD 543
Query: 536 DDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVR 595
++ K+SS+ +HSE+LAIA G++ KPG IR+ KNLRVC+DCH VTKLIS ++ E+IVR
Sbjct: 544 EEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVR 603
Query: 596 DRARFHHFKDGSCSCMDYW 614
DR RFHHF++G CSC DYW
Sbjct: 604 DRNRFHHFRNGVCSCRDYW 622
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/610 (38%), Positives = 347/610 (56%), Gaps = 30/610 (4%)
Query: 21 FNNNRNEGSFNNHSSLLSSLTECKSMSQL---KQIHAQALRTALPQQHKTLLIYSRIIHF 77
F++ R + SS ++ C S+ + KQ H QA Q + + I+ +
Sbjct: 64 FSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF--VFGYQSDIFVSSALIVMY 121
Query: 78 ASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGN-----VL 132
++ L+ A +VF +I N +W ++IR + +A A+ LF+ ++ N +
Sbjct: 122 STCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA-LDAVSLFKDLLVDENDDDDAMF 180
Query: 133 PDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGH--LDLAN 190
D + AC+ + A + H+ + KRG V + N+L+ YA G + +A
Sbjct: 181 LDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVAR 240
Query: 191 KVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILFEPDGYTFQSITSACAGLAT 250
K+FD ++++ VS+N ++ + Q G + A ++FRR L + TF +IT + LA
Sbjct: 241 KIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR---LVKNKVVTFNAITLSTVLLAV 297
Query: 251 -----LSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLT 305
L +G H ++R L DV+V S+IDMYCKCG ++ AR+ F+ M +++
Sbjct: 298 SHSGALRIGKCIHDQVIRM---GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR 354
Query: 306 SWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDV 365
SW ++I G+ +HG A AL+ F ++ + PN ITFV VL+AC+H G+ EG +F+
Sbjct: 355 SWTAMIAGYGMHGHAAKALELFPAMI-DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNA 413
Query: 366 MINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASV 425
M + + P LEHYGC+VDLL RAG + +A L+ M MKPD++IW SLL A C+ H +V
Sbjct: 414 MKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL-AACRIHKNV 472
Query: 426 VLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIE 485
L+E ++ E + C G Y+LLS +YA A RW DV VR +M ++G+ K PG S +E
Sbjct: 473 ELAEISVARLFELDSSNC-GYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLE 531
Query: 486 IDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAM-VDELDDGKQSSLR 544
++G H F GD HPQ ++IY FL ++ KL GY + S VDE + K+ +LR
Sbjct: 532 LNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDE--EEKEMTLR 589
Query: 545 LHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFK 604
+HSE+LAIA GI+N PG + V KNLRVC DCH V KLIS+I + E +VRD RFHHFK
Sbjct: 590 VHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFK 649
Query: 605 DGSCSCMDYW 614
DG CSC DYW
Sbjct: 650 DGGCSCGDYW 659
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 178/345 (51%), Gaps = 18/345 (5%)
Query: 72 SRIIHFASFADLDYAFRVFYQ-IENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGN 130
SR++H + +F + ++ + F+WN++I ARS D+ +A++ F M + +
Sbjct: 14 SRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDS-AEALLAFSSM-RKLS 71
Query: 131 VLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLAN 190
+ P + +FP A+KAC+ LF GKQ H F G SD++++++LI Y++CG L+ A
Sbjct: 72 LYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDAR 131
Query: 191 KVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQI--------LFEPDGYTFQSIT 242
KVFD + +R++VSW MI + G A+ LF+ + + +F D S+
Sbjct: 132 KVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF-LDSMGLVSVI 190
Query: 243 SACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKC--GSLDIARQVFESMP 300
SAC+ + L H+++++ V V N+L+D Y K G + +AR++F+ +
Sbjct: 191 SACSRVPAKGLTESIHSFVIK---RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 301 KRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGR 360
+D S+NSI+ +A G + A + F RLV + + N+IT VL A +H G + G+
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 361 DYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMK 405
D +I V+ ++D+ + G ++ A M K
Sbjct: 308 CIHDQVIRMGLEDDVIVGTS-IIDMYCKCGRVETARKAFDRMKNK 351
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/539 (40%), Positives = 327/539 (60%), Gaps = 15/539 (2%)
Query: 77 FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKH 136
+ F L+ A ++F Q+ N +W T+I A ++ +A+ L M+ + NV P+ +
Sbjct: 106 YVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK-CKIHQKALELLVLML-RDNVRPNVY 163
Query: 137 TFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNM 196
T+ L++C S + H I K GL SDV++ ++LI +A G + A VFD M
Sbjct: 164 TYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 197 LERSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGM 255
+ + WN +I F Q D AL+LF+RM+ F + T S+ AC GLA L LGM
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 256 WAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFA 315
AH +I+++ D+++NN+L+DMYCKCGSL+ A +VF M +RD+ +W+++I G A
Sbjct: 281 QAHVHIVKY-----DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 316 LHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPV 375
+G ++ ALK F+R+ PN IT VGVL AC+H G++ +G YF M Y I PV
Sbjct: 336 QNGYSQEALKLFERMK-SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV 394
Query: 376 LEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQV 435
EHYGC++DLL +AG +D+A+ L++ M +PDAV WR+LL A C+ ++VL+E AK+V
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA-CRVQRNMVLAEYAAKKV 453
Query: 436 IESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFA 495
I + +G Y LLS +YA++++W+ V +R M D+G+ KEPGCS IE++ H F
Sbjct: 454 IALDPED-AGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFII 512
Query: 496 GDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALG 555
GD SHPQ ++ L+ + +L GY P+ + + D + + SLR HSE+LA+A G
Sbjct: 513 GDNSHPQIVEVSKKLNQLIHRLTGIGYVPE-TNFVLQDLEGEQMEDSLRHHSEKLALAFG 571
Query: 556 ILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
++ L IR+ KNLR+C DCH KL S++ I++RD R+HHF+DG CSC DYW
Sbjct: 572 LMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 119 bits (297), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 151/303 (49%), Gaps = 13/303 (4%)
Query: 116 PQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNS 175
P+A+ + G + D T+ +K C A +G H++ G +++ N
Sbjct: 43 PRAMKAMDSLQSHG-LWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNV 101
Query: 176 LIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRM-QILFEPD 234
LI+ Y L+ A+++FD M +R+++SW MI A+ + AL+L M + P+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 235 GYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQ 294
YT+ S+ +C G++ + + H I++ L +DV V ++LID++ K G + A
Sbjct: 162 VYTYSSVLRSCNGMSDVRM---LHCGIIK---EGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 295 VFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRG 354
VF+ M D WNSII GFA + R++ AL+ F R+ F T VL AC
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRM-KRAGFIAEQATLTSVLRACTGLA 274
Query: 355 MVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSL 414
++ G V I +Y+ +L + LVD+ + G++++AL + + M + D + W ++
Sbjct: 275 LLELGMQAH-VHIVKYDQDLILNN--ALVDMYCKCGSLEDALRVFNQMKER-DVITWSTM 330
Query: 415 LDA 417
+
Sbjct: 331 ISG 333
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/591 (38%), Positives = 348/591 (58%), Gaps = 21/591 (3%)
Query: 29 SFNNHSSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRII--HFASFADLDYA 86
SF S+L +++ + +S K+IH A+R+ +L+ S + +A L+ A
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGF----DSLVNISTALVDMYAKCGSLETA 290
Query: 87 FRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACA 146
++F + N +WN++I A ++ + K +A+++FQ+M+++G V P + AL ACA
Sbjct: 291 RQLFDGMLERNVVSWNSMIDAYVQNENPK-EAMLIFQKMLDEG-VKPTDVSVMGALHACA 348
Query: 147 YLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNV 206
L +G+ H + GL +V + NSLI Y C +D A +F + R+LVSWN
Sbjct: 349 DLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNA 408
Query: 207 MIDAFVQFGEFDSALKLFRRMQI-LFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHC 265
MI F Q G AL F +M+ +PD +T+ S+ +A A L+ W H ++R C
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 266 DHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALK 325
L +V V +L+DMY KCG++ IAR +F+ M +R +T+WN++I G+ HG +AAL+
Sbjct: 469 ---LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALE 525
Query: 326 YFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDL 385
F+ + + + PN +TF+ V+SAC+H G+V G F +M Y+I ++HYG +VDL
Sbjct: 526 LFEEMQ-KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584
Query: 386 LARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIE--SEGGIC 443
L RAG ++EA + MP+KP ++ ++L AC + H +V +E+ A+++ E + G
Sbjct: 585 LGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGAC-QIHKNVNFAEKAAERLFELNPDDG-- 641
Query: 444 SGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQT 503
G +VLL+ +Y +A W VG VR M +G+ K PGCS +EI H FF+G T+HP +
Sbjct: 642 -GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700
Query: 504 KQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGM 563
K+IY FL+ + +K GY PD + V+ +D K+ L HSE+LAI+ G+LN G
Sbjct: 701 KKIYAFLEKLICHIKEAGYVPDTNLVLGVE--NDVKEQLLSTHSEKLAISFGLLNTTAGT 758
Query: 564 PIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
I V KNLRVC DCH TK IS + EI+VRD RFHHFK+G+CSC DYW
Sbjct: 759 TIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 179/353 (50%), Gaps = 12/353 (3%)
Query: 10 PPTPQTHSHSIFNNNRNEGSFNNHSSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLL 69
P P H H + N + H + L L C S+ +L+QI + L Q+H
Sbjct: 15 PNPPSRHRHFLSERNYIPANVYEHPAALL-LERCSSLKELRQILPLVFKNGLYQEH---F 70
Query: 70 IYSRIIH-FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQ 128
++++ F + +D A RVF I++ + ++T+++ A+ D +A+ F RM
Sbjct: 71 FQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLD-KALQFFVRM-RY 128
Query: 129 GNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDL 188
+V P + F + LK C GK+ H + K G D++ L + YA C ++
Sbjct: 129 DDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNE 188
Query: 189 ANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRM-QILFEPDGYTFQSITSACAG 247
A KVFD M ER LVSWN ++ + Q G AL++ + M + +P T S+ A +
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 248 LATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSW 307
L +S+G H Y +R SLV ++ +L+DMY KCGSL+ ARQ+F+ M +R++ SW
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVN---ISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 308 NSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGR 360
NS+I + + + A+ F ++ ++E P ++ +G L AC G + GR
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKM-LDEGVKPTDVSVMGALHACADLGDLERGR 357
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 186/368 (50%), Gaps = 12/368 (3%)
Query: 77 FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKH 136
+A ++ A +VF ++ + +WNT++ +++ A+ A+ + + M E+ N+ P
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR-MALEMVKSMCEE-NLKPSFI 237
Query: 137 TFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNM 196
T L A + L S GK+ H + + G S V I+ +L+ YA CG L+ A ++FD M
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 197 LERSLVSWNVMIDAFVQFGEFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSLGM 255
LER++VSWN MIDA+VQ A+ +F++M +P + ACA L L G
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 256 WAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFA 315
+ H + L +V V NSLI MYCKC +D A +F + R L SWN++ILGFA
Sbjct: 358 FIHKL---SVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 316 LHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPV 375
+GR AL YF ++ + P++ T+V V++A + + V++ V
Sbjct: 415 QNGRPIDALNYFSQM-RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNV 473
Query: 376 LEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKK---HASVVLSEEVA 432
LVD+ A+ G I A L+ +M + W +++D A++ L EE+
Sbjct: 474 FVTTA-LVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531
Query: 433 KQVIESEG 440
K I+ G
Sbjct: 532 KGTIKPNG 539
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/587 (36%), Positives = 341/587 (58%), Gaps = 15/587 (2%)
Query: 34 SSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLI--YSRIIHFASFADLDYAFRVFY 91
SS+ S+ E +++S KQ+H+ A+R+ L + L+ Y++ ++ +D +VF
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKC---SADGSVDDCRKVFD 329
Query: 92 QIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAF 151
++E+ + +W LI ++ + +AI LF MI QG+V P+ TF A KAC L
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 152 SQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAF 211
GKQ FKRGL S+ + NS+I + ++ A + F+++ E++LVS+N +D
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 212 VQFGEFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLV 270
+ F+ A KL + + +TF S+ S A + ++ G H+ +++ L
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL---GLS 506
Query: 271 TDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRL 330
+ V N+LI MY KCGS+D A +VF M R++ SW S+I GFA HG A L+ F+++
Sbjct: 507 CNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 331 VVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAG 390
+ EE PN +T+V +LSAC+H G+VSEG +F+ M ++ I P +EHY C+VDLL RAG
Sbjct: 567 I-EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 625
Query: 391 NIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLL 450
+ +A ++ MP + D ++WR+ L A C+ H++ L + A++++E + Y+ L
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTFLGA-CRVHSNTELGKLAARKILELDPNE-PAAYIQL 683
Query: 451 SRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFL 510
S +YA A +W + +R+ M ++ + KE GCS IE+ H+F+ GDT+HP QIY L
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDEL 743
Query: 511 DLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRL---HSERLAIALGILNLKPGMPIRV 567
D + ++K GY PD E ++ + RL HSE++A+A G+++ P+RV
Sbjct: 744 DRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRV 803
Query: 568 FKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
FKNLRVC DCH K IS + EI++RD RFHHFKDG CSC DYW
Sbjct: 804 FKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 169/361 (46%), Gaps = 17/361 (4%)
Query: 83 LDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFAL 142
+ A++VF ++ N TW +I C + + +AI F M+ G DK T
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQ-MGFPREAIRFFLDMVLSG-FESDKFTLSSVF 276
Query: 143 KACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASC---GHLDLANKVFDNMLER 199
ACA L S GKQ H+ + GLV DV SL+ YA C G +D KVFD M +
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 200 SLVSWNVMIDAFVQFGEFDS-ALKLFRRM--QILFEPDGYTFQSITSACAGLATLSLGMW 256
S++SW +I +++ + A+ LF M Q EP+ +TF S AC L+ +G
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 257 AHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFAL 316
+ L ++ V NS+I M+ K ++ A++ FES+ +++L S+N+ + G
Sbjct: 395 VLGQAFK---RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Query: 317 HGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVL 376
+ E A K + E ++ TF +LS + G + +G ++ + ++
Sbjct: 452 NLNFEQAFKLLSE-ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCNQ 509
Query: 377 EHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVI 436
L+ + ++ G+ID A + + M + + + W S++ KH + E Q+I
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENR-NVISWTSMITG-FAKHGFAIRVLETFNQMI 567
Query: 437 E 437
E
Sbjct: 568 E 568
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 16/294 (5%)
Query: 118 AIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLI 177
A+ M G D TF LK+C F GK HA + + + D + NSLI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 178 HFYASCGHLDLANKVFDNML---ERSLVSWNVMIDAFVQFGEFDSALKLFRR-MQILFEP 233
Y+ G A VF+ M +R +VSW+ M+ + G A+K+F +++ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 234 DGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKC-GSLDIA 292
+ Y + ++ AC+ + +G ++++ +DV V SLIDM+ K S + A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMK--TGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 293 RQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNH 352
+VF+ M + ++ +W +I G A+++F +V+ F + T V SAC
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL-SGFESDKFTLSSVFSACAE 281
Query: 353 RGMVSEGRDYFDVMINEYNITPVLEHYGC-LVDLLARA---GNIDEALHLVSNM 402
+S G+ I + +++ C LVD+ A+ G++D+ + M
Sbjct: 282 LENLSLGKQLHSWAIR----SGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRM 331
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/586 (39%), Positives = 334/586 (56%), Gaps = 15/586 (2%)
Query: 36 LLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIY-SRIIHFASFADLDYAFRVFYQIE 94
LLS + L+QIHA LRT+L + + SR+ D++Y+ RVF Q
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73
Query: 95 NPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQG 154
NP NT+IRA + S + LF+ + ++ + + FALK C G
Sbjct: 74 NPTLSHCNTMIRAFSLS-QTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGG 132
Query: 155 KQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQF 214
Q H IF G +SD + +L+ Y++C + A KVFD + +R VSWNV+ +++
Sbjct: 133 LQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRN 192
Query: 215 GEFDSALKLFRRMQI----LFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLV 270
L LF +M+ +PDG T ACA L L G H +I D + +
Sbjct: 193 KRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI----DENGL 248
Query: 271 TDVL-VNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDR 329
+ L ++N+L+ MY +CGS+D A QVF M +R++ SW ++I G A++G + A++ F+
Sbjct: 249 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 308
Query: 330 LVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMIN-EYNITPVLEHYGCLVDLLAR 388
++ + SP T G+LSAC+H G+V+EG +FD M + E+ I P L HYGC+VDLL R
Sbjct: 309 ML-KFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGR 367
Query: 389 AGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYV 448
A +D+A L+ +M MKPD+ IWR+LL AC + H V L E V +IE + +G YV
Sbjct: 368 ARLLDKAYSLIKSMEMKPDSTIWRTLLGAC-RVHGDVELGERVISHLIELKAEE-AGDYV 425
Query: 449 LLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYG 508
LL Y++ +W V +R LM +K + +PGCS+IE+ G HEF D SHP+ ++IY
Sbjct: 426 LLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYK 485
Query: 509 FLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVF 568
L I+++LK GY + + E ++ K +LR HSE+LAIA GIL PG IRV
Sbjct: 486 MLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVT 545
Query: 569 KNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
KNLR C DCH K +S +++ +IVRDR+RFHHFK GSCSC D+W
Sbjct: 546 KNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/576 (38%), Positives = 327/576 (56%), Gaps = 47/576 (8%)
Query: 77 FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKH 136
+AS ++YA VF ++ + + TWNT+I R +A LF+ M + NV+PD+
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCR-FGLVDEAFKLFEEM-KDSNVMPDEM 213
Query: 137 TFPFALKACA-----------YLFAFSQGKQAHAHI--------------------FKRG 165
+ AC Y F + H+ F++
Sbjct: 214 ILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273
Query: 166 LVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFR 225
V +++++ +++ Y+ CG LD A +FD ++ LV W MI A+V+ AL++F
Sbjct: 274 SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFE 333
Query: 226 RMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYC 284
M +PD + S+ SACA L L W H+ I H + L +++ +NN+LI+MY
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI--HVN-GLESELSINNALINMYA 390
Query: 285 KCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFV 344
KCG LD R VFE MP+R++ SW+S+I ++HG A AL F R+ +E+ PN +TFV
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMK-QENVEPNEVTFV 449
Query: 345 GVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPM 404
GVL C+H G+V EG+ F M +EYNITP LEHYGC+VDL RA + EAL ++ +MP+
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV 509
Query: 405 KPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVG 464
+ VIW SL+ A C+ H + L + AK+++E E G VL+S +YA +RW DV
Sbjct: 510 ASNVVIWGSLMSA-CRIHGELELGKFAAKRILELEPDH-DGALVLMSNIYAREQRWEDVR 567
Query: 465 LVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTP 524
+R++M +K V KE G S I+ +G +HEF GD H Q+ +IY LD + KLK GY P
Sbjct: 568 NIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVP 627
Query: 525 DYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMP------IRVFKNLRVCKDCH 578
D + +VD ++ K+ + HSE+LA+ G++N + IR+ KNLRVC+DCH
Sbjct: 628 D-CGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCH 686
Query: 579 EVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
KL+S+++ EIIVRDR RFH +K+G CSC DYW
Sbjct: 687 LFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 165 bits (418), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 199/414 (48%), Gaps = 37/414 (8%)
Query: 34 SSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQI 93
+++L L+ CKS++ +KQ+HA LRT + + + L + +S +L YA VF I
Sbjct: 13 NTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVS--SSSINLSYALNVFSSI 70
Query: 94 ENP-NSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFS 152
+P S +N +R +RS ++P+A +LF + I D+ +F LKA + + A
Sbjct: 71 PSPPESIVFNPFLRDLSRS--SEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALF 128
Query: 153 QGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFV 212
+G + H FK + D ++ + YASCG ++ A VFD M R +V+WN MI+ +
Sbjct: 129 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 188
Query: 213 QFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILR-------H 264
+FG D A KLF M+ PD +I SAC + + +++ H
Sbjct: 189 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 248
Query: 265 CDHSLVT---------------------DVLVNNSLIDMYCKCGSLDIARQVFESMPKRD 303
+LVT ++ V+ +++ Y KCG LD A+ +F+ K+D
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 308
Query: 304 LTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYF 363
L W ++I + + AL+ F+ + P+ ++ V+SAC + G++ + + +
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEMCC-SGIKPDVVSMFSVISACANLGILDKAK-WV 366
Query: 364 DVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDA 417
I+ + L L+++ A+ G +D + MP + + V W S+++A
Sbjct: 367 HSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR-NVVSWSSMINA 419
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/580 (37%), Positives = 339/580 (58%), Gaps = 15/580 (2%)
Query: 40 LTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFA---DLDYAFRVFYQIE-N 95
L C SM +L++IH+ + L Q H + I++ ++ F + + L +A +F + +
Sbjct: 12 LQGCNSMKKLRKIHSHVIINGL-QHHPS--IFNHLLRFCAVSVTGSLSHAQLLFDHFDSD 68
Query: 96 PNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGK 155
P++ WN LIR + S + +I+ + RM+ PD TF FALK+C + + +
Sbjct: 69 PSTSDWNYLIRGFSNS-SSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 156 QAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFG 215
+ H + + G + D + SL+ Y++ G +++A+KVFD M R LVSWNVMI F G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 216 EFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVL 274
+ AL +++RM D YT ++ S+CA ++ L++G+ H CD + V
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIA---CDIRCESCVF 244
Query: 275 VNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEE 334
V+N+LIDMY KCGSL+ A VF M KRD+ +WNS+I+G+ +HG A+ +F R +V
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFF-RKMVAS 303
Query: 335 SFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDE 394
PN+ITF+G+L C+H+G+V EG ++F++M +++++TP ++HYGC+VDL RAG ++
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363
Query: 395 ALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVY 454
+L ++ D V+WR+LL +C K H ++ L E K++++ E +G YVL++ +Y
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSC-KIHRNLELGEVAMKKLVQLEA-FNAGDYVLMTSIY 421
Query: 455 ASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLID 514
++A +RKL+ + PG S IEI H+F D HP++ IY L +
Sbjct: 422 SAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVI 481
Query: 515 EKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVC 574
+ GY P+ S D S+ HSE+LAIA G++ G +R+ KNLRVC
Sbjct: 482 NRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVC 541
Query: 575 KDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
+DCH TK +S+ FN EIIVRDR RFHHF DG CSC DYW
Sbjct: 542 RDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/586 (36%), Positives = 344/586 (58%), Gaps = 21/586 (3%)
Query: 35 SLLSSLTECKSMSQLKQIHAQALRTALPQQHK---TLL-IYSRIIHFASFADLDYAFRVF 90
S+ + + + +S + +H+ ++ ++ + TLL +YS+ DLD A VF
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC------GDLDSAKAVF 354
Query: 91 YQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFA 150
++ + + ++ ++I AR A +A+ LF+ M E+G + PD +T L CA
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLA-GEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARYRL 412
Query: 151 FSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDA 210
+GK+ H I + L D++++N+L+ YA CG + A VF M + ++SWN +I
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 211 FVQFGEFDSALKLFRRM--QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHS 268
+ + + AL LF + + F PD T + ACA L+ G H YI+R+
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN---G 529
Query: 269 LVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFD 328
+D V NSL+DMY KCG+L +A +F+ + +DL SW +I G+ +HG + A+ F+
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 329 RLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLAR 388
++ + + I+FV +L AC+H G+V EG +F++M +E I P +EHY C+VD+LAR
Sbjct: 590 QMR-QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 389 AGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYV 448
G++ +A + NMP+ PDA IW +LL C+ H V L+E+VA++V E E +G YV
Sbjct: 649 TGDLIKAYRFIENMPIPPDATIWGALL-CGCRIHHDVKLAEKVAEKVFELEPE-NTGYYV 706
Query: 449 LLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYG 508
L++ +YA A +W V +RK + +G+ K PGCS IEI G + F AGD+S+P+T+ I
Sbjct: 707 LMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEA 766
Query: 509 FLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVF 568
FL + ++ GY+P ++ A++D + K+ +L HSE+LA+ALGI++ G IRV
Sbjct: 767 FLRKVRARMIEEGYSP-LTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVT 825
Query: 569 KNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
KNLRVC DCHE+ K +S++ EI++RD RFH FKDG CSC +W
Sbjct: 826 KNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 178/342 (52%), Gaps = 9/342 (2%)
Query: 75 IHFASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPD 134
+ + + DL A RVF +++ + WN L+ A+S D +I LF++M+ G V D
Sbjct: 137 LMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSG-SIGLFKKMMSSG-VEMD 194
Query: 135 KHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFD 194
+TF K+ + L + G+Q H I K G + NSL+ FY +D A KVFD
Sbjct: 195 SYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFD 254
Query: 195 NMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSL 253
M ER ++SWN +I+ +V G + L +F +M + E D T S+ + CA +SL
Sbjct: 255 EMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL 314
Query: 254 GMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILG 313
G H+ ++ C + N+L+DMY KCG LD A+ VF M R + S+ S+I G
Sbjct: 315 GRAVHSIGVKAC---FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 314 FALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNIT 373
+A G A A+K F+ + EE SP+ T VL+ C ++ EG+ + I E ++
Sbjct: 372 YAREGLAGEAVKLFEEM-EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLG 429
Query: 374 PVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLL 415
+ L+D+ A+ G++ EA + S M +K D + W +++
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTII 470
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 153/327 (46%), Gaps = 12/327 (3%)
Query: 134 DKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVF 193
D T L+ CA + GK+ I G V D + + L Y +CG L A++VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 194 DNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLS 252
D + + WN++++ + G+F ++ LF++M E D YTF ++ + + L ++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 253 LGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIIL 312
G H +IL+ V NSL+ Y K +D AR+VF+ M +RD+ SWNSII
Sbjct: 213 GGEQLHGFILK---SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 313 GFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNI 372
G+ +G AE L F +++V + T V V + C ++S GR + +
Sbjct: 270 GYVSNGLAEKGLSVFVQMLV-SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC-F 327
Query: 373 TPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVA 432
+ L+D+ ++ G++D A + M + V + S++ +A L+ E
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS-VVSYTSMIAG----YAREGLAGEAV 382
Query: 433 KQVIE-SEGGICSGVYVLLSRVYASAR 458
K E E GI VY + + + AR
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCAR 409
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/592 (36%), Positives = 342/592 (57%), Gaps = 16/592 (2%)
Query: 27 EGSFNNHSSLLSSLTECKSMSQLKQIHAQALRTA-LPQQHKTLLIYSRIIHFASFAD-LD 84
E F+ + +LL++ + +++ +++HA ++T LP + + +R++ F D L+
Sbjct: 49 EMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATY----LRTRLLIFYGKCDCLE 104
Query: 85 YAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKA 144
A +V ++ N +W +I +++ + +A+ +F M+ + + P++ TF L +
Sbjct: 105 DARKVLDEMPEKNVVSWTAMISRYSQTGHSS-EALTVFAEMM-RSDGKPNEFTFATVLTS 162
Query: 145 CAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSW 204
C GKQ H I K S +++ +SL+ YA G + A ++F+ + ER +VS
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222
Query: 205 NVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILR 263
+I + Q G + AL++F R+ P+ T+ S+ +A +GLA L G AH ++LR
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR 282
Query: 264 HCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAA 323
L ++ NSLIDMY KCG+L AR++F++MP+R SWN++++G++ HG
Sbjct: 283 R---ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Query: 324 LKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMI-NEYNITPVLEHYGCL 382
L+ F + E+ P+++T + VLS C+H M G + FD M+ EY P EHYGC+
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Query: 383 VDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGI 442
VD+L RAG IDEA + MP KP A + SLL AC + H SV + E V +++IE E
Sbjct: 400 VDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGAC-RVHLSVDIGESVGRRLIEIEPE- 457
Query: 443 CSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQ 502
+G YV+LS +YASA RW DV VR +M K VTKEPG S I+ + H F A D +HP+
Sbjct: 458 NAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPR 517
Query: 503 TKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPG 562
+++ + I K+K GY PD S + D ++ K+ L HSE+LA+ G++ G
Sbjct: 518 REEVLAKMKEISIKMKQAGYVPDLS-CVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEG 576
Query: 563 MPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
+PIRVFKNLR+C DCH K+ S++F E+ +RD+ RFH DG CSC DYW
Sbjct: 577 IPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/535 (38%), Positives = 311/535 (58%), Gaps = 14/535 (2%)
Query: 83 LDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFAL 142
+D RVF + + ++NT+I A+S + + R + ++ PD T L
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQS--GMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 143 KACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLV 202
+ +GK+ H ++ ++G+ SDVYI +SL+ YA ++ + +VF + R +
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 203 SWNVMIDAFVQFGEFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSLGMWAHAYI 261
SWN ++ +VQ G ++ AL+LFR+M +P F S+ ACA LATL LG H Y+
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 262 LRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAE 321
LR +++ + ++L+DMY KCG++ AR++F+ M D SW +II+G ALHG
Sbjct: 370 LRG---GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGH 426
Query: 322 AALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGC 381
A+ F+ + + PN + FV VL+AC+H G+V E YF+ M Y + LEHY
Sbjct: 427 EAVSLFEEMK-RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 382 LVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQV--IESE 439
+ DLL RAG ++EA + +S M ++P +W +LL +C H ++ L+E+VA+++ ++SE
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC-SVHKNLELAEKVAEKIFTVDSE 544
Query: 440 GGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTS 499
G YVL+ +YAS RW ++ +R M KG+ K+P CS IE+ H F +GD S
Sbjct: 545 N---MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRS 601
Query: 500 HPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNL 559
HP +I FL + E+++ GY D S + D ++ K+ L HSERLA+A GI+N
Sbjct: 602 HPSMDKINEFLKAVMEQMEKEGYVADTS-GVLHDVDEEHKRELLFGHSERLAVAFGIINT 660
Query: 560 KPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
+PG IRV KN+R+C DCH K IS+I EIIVRD +RFHHF G+CSC DYW
Sbjct: 661 EPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 203/444 (45%), Gaps = 53/444 (11%)
Query: 35 SLLSSLTECKSMSQLKQIHAQALRT-ALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQI 93
+L+ + T KS SQ KQ+HAQ +RT +L +++I + + L A +F +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISI----YTNLKLLHEALLLFKTL 65
Query: 94 ENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQ 153
++P W ++IR C +A+ F M G PD + FP LK+C +
Sbjct: 66 KSPPVLAWKSVIR-CFTDQSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRF 123
Query: 154 GKQAHAHIFKRGLVSDVYINNSLIHFYA---------SCGH------------------- 185
G+ H I + G+ D+Y N+L++ YA S G+
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 186 --------LDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGY 236
+D +VF+ M + +VS+N +I + Q G ++ AL++ R M +PD +
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 237 TFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVF 296
T S+ + + G H Y++R + +DV + +SL+DMY K ++ + +VF
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIR---KGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 297 ESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMV 356
+ RD SWNS++ G+ +GR AL+ F R +V P ++ F V+ AC H +
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLF-RQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 357 SEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLD 416
G+ ++ + + LVD+ ++ GNI A + M + D V W +++
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFI-ASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIM 417
Query: 417 ACC---KKHASVVLSEEVAKQVIE 437
H +V L EE+ +Q ++
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVK 441
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 152/323 (47%), Gaps = 10/323 (3%)
Query: 34 SSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIH-FASFADLDYAFRVFYQ 92
SS+L +E + + K+IH +R + + I S ++ +A A ++ + RVF +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSD---VYIGSSLVDMYAKSARIEDSERVFSR 302
Query: 93 IENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFS 152
+ + +WN+L+ ++ +A+ LF++M+ V P F + ACA+L
Sbjct: 303 LYCRDGISWNSLVAGYVQN-GRYNEALRLFRQMV-TAKVKPGAVAFSSVIPACAHLATLH 360
Query: 153 QGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFV 212
GKQ H ++ + G S+++I ++L+ Y+ CG++ A K+FD M VSW +I
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 213 QFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVT 271
G A+ LF M+ +P+ F ++ +AC+ + + W + + + L
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA-WGYFNSMTKV-YGLNQ 478
Query: 272 DVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTS-WNSIILGFALHGRAEAALKYFDRL 330
++ ++ D+ + G L+ A M S W++++ ++H E A K +++
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 538
Query: 331 VVEESFSPNSITFVGVLSACNHR 353
+S + + + + A N R
Sbjct: 539 FTVDSENMGAYVLMCNMYASNGR 561
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/550 (39%), Positives = 309/550 (56%), Gaps = 34/550 (6%)
Query: 74 IIHFASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLP 133
I +A +D A ++F + + FTW ++ + RM+E+ L
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG------------YIQNRMVEEARELF 304
Query: 134 DKHTFPFALKACAYLFAFSQGKQAH--AHIFKRGLVSDVYINNSLIHFYASCGHLDLANK 191
DK + A L + QG++ +F +V N++I YA CG + A
Sbjct: 305 DKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKN 364
Query: 192 VFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILFEPDG-----YTFQSITSACA 246
+FD M +R VSW MI + Q G AL+LF +M E +G +F S S CA
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM----EREGGRLNRSSFSSALSTCA 420
Query: 247 GLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTS 306
+ L LG H +++ T V N+L+ MYCKCGS++ A +F+ M +D+ S
Sbjct: 421 DVVALELGKQLHGRLVKG---GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS 477
Query: 307 WNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVM 366
WN++I G++ HG E AL++F+ + E P+ T V VLSAC+H G+V +GR YF M
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFESMK-REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTM 536
Query: 367 INEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVV 426
+Y + P +HY C+VDLL RAG +++A +L+ NMP +PDA IW +LL A + H +
Sbjct: 537 TQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGAS-RVHGNTE 595
Query: 427 LSEEVAKQV--IESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSI 484
L+E A ++ +E E SG+YVLLS +YAS+ RW DVG +R M DKGV K PG S I
Sbjct: 596 LAETAADKIFAMEPEN---SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 652
Query: 485 EIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLR 544
EI H F GD HP+ +I+ FL+ +D ++K GY S + D ++ K+ +R
Sbjct: 653 EIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTS-VVLHDVEEEEKERMVR 711
Query: 545 LHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFK 604
HSERLA+A GI+ + G PIRV KNLRVC+DCH K ++RI II+RD RFHHFK
Sbjct: 712 YHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFK 771
Query: 605 DGSCSCMDYW 614
DGSCSC DYW
Sbjct: 772 DGSCSCGDYW 781
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 155/330 (46%), Gaps = 31/330 (9%)
Query: 86 AFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKAC 145
A RVF ++ +S ++N +I R+ + + L +++ ++ +P++ + +
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFE-----LARKLFDE---MPERDLVSWNVMIK 134
Query: 146 AYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWN 205
Y+ + GK +F+ DV N+++ YA G +D A VFD M E++ VSWN
Sbjct: 135 GYVRNRNLGKARE--LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWN 192
Query: 206 VMIDAFVQFGEFDSALKLFRRMQILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHC 265
++ A+VQ + + A LF+ + + S G + A +
Sbjct: 193 ALLSAYVQNSKMEEACMLFK------SRENWALVSWNCLLGGFVKKKKIVEARQFF---- 242
Query: 266 DHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALK 325
D V DV+ N++I Y + G +D ARQ+F+ P +D+ +W +++ G+ + E A +
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 326 YFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDL 385
FD++ N +++ +L+ + ++ FDVM N++ + ++
Sbjct: 303 LFDKMP-----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-NVST----WNTMITG 352
Query: 386 LARAGNIDEALHLVSNMPMKPDAVIWRSLL 415
A+ G I EA +L MP K D V W +++
Sbjct: 353 YAQCGKISEAKNLFDKMP-KRDPVSWAAMI 381
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 114/276 (41%), Gaps = 73/276 (26%)
Query: 168 SDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRM 227
SD+ N I Y G + A +VF M S VS+N MI +++ GEF+ A KLF M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 228 QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCG 287
P+ D++ N +I Y +
Sbjct: 122 -----PE------------------------------------RDLVSWNVMIKGYVRNR 140
Query: 288 SLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNS------- 340
+L AR++FE MP+RD+ SWN+++ G+A +G + A FDR+ + S N+
Sbjct: 141 NLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 341 -------------------ITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGC 381
+++ +L + + E R +FD M N+ V+ +
Sbjct: 201 NSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM----NVRDVVS-WNT 255
Query: 382 LVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDA 417
++ A++G IDEA L P++ D W +++
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSG 290
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/596 (37%), Positives = 333/596 (55%), Gaps = 23/596 (3%)
Query: 28 GSFNNHSSLLSSLTECKSMSQLK---QIHAQALRTALPQQHKTLLIYSRIIHFASFADLD 84
GSF +L+SSL+ C S+ K QIH ++L+ + + + + +A L+
Sbjct: 414 GSF----TLISSLSSCASLKWAKLGQQIHGESLKLGIDLN--VSVSNALMTLYAETGYLN 467
Query: 85 YAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKA 144
++F + + +WN++I A ARS + P+A+V F G L ++ TF L A
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKL-NRITFSSVLSA 526
Query: 145 CAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLER-SLVS 203
+ L GKQ H K + + N+LI Y CG +D K+F M ER V+
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 586
Query: 204 WNVMIDAFVQFGEFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSLGMWAHAYIL 262
WN MI ++ AL L M Q D + + ++ SA A +ATL GM HA +
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 646
Query: 263 RHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEA 322
R C L +DV+V ++L+DMY KCG LD A + F +MP R+ SWNS+I G+A HG+ E
Sbjct: 647 RAC---LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEE 703
Query: 323 ALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCL 382
ALK F+ + ++ P+ +TFVGVLSAC+H G++ EG +F+ M + Y + P +EH+ C+
Sbjct: 704 ALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCM 763
Query: 383 VDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHA-SVVLSEEVAKQV--IESE 439
D+L RAG +D+ + MPMKP+ +IWR++L ACC+ + L ++ A+ + +E E
Sbjct: 764 ADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPE 823
Query: 440 GGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTS 499
+ YVLL +YA+ RW D+ RK M D V KE G S + + H F AGD S
Sbjct: 824 NAV---NYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKS 880
Query: 500 HPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNL 559
HP IY L ++ K++ GY P + A+ D + K+ L HSE+LA+A +
Sbjct: 881 HPDADVIYKKLKELNRKMRDAGYVPQ-TGFALYDLEQENKEEILSYHSEKLAVAFVLAAQ 939
Query: 560 KPG-MPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
+ +PIR+ KNLRVC DCH K IS+I +II+RD RFHHF+DG+CSC D+W
Sbjct: 940 RSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 189/419 (45%), Gaps = 27/419 (6%)
Query: 14 QTHSHSIFNNNRNEGSFNNHSSLLSSLTECKSMSQ-----LKQIHAQALRTALPQQHKTL 68
Q + IF++ + +GS + S +T S+++ L+QI ++ L L
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD---L 243
Query: 69 LIYSRIIH-FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIE 127
+ S ++ FA L YA +VF Q+E N+ T N L+ R +A LF M
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ-KWGEEATKLFMDMNS 302
Query: 128 QGNVLPDKHTF---PFALKACAYLFAFSQGKQAHAHIFKRGLVS-DVYINNSLIHFYASC 183
+V P+ + F + A +G++ H H+ GLV V I N L++ YA C
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 184 GHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSAL---KLFRRMQILFEPDGYTFQS 240
G + A +VF M ++ VSWN MI Q G F A+ K RR IL P +T S
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL--PGSFTLIS 420
Query: 241 ITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMP 300
S+CA L LG H L+ + +V V+N+L+ +Y + G L+ R++F SMP
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLK---LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 301 KRDLTSWNSIILGFALHGRA--EAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSE 358
+ D SWNSII A R+ EA + + + + N ITF VLSA +
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKL--NRITFSSVLSAVSSLSFGEL 535
Query: 359 GRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDA 417
G+ + + NI L+ + G +D + S M + D V W S++
Sbjct: 536 GKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 189/413 (45%), Gaps = 24/413 (5%)
Query: 27 EGSFNNHSSLLSSLTECKSMSQL-----KQIHAQ--ALRTALPQQHKTLLIYSRIIHFAS 79
EG F+N + +S L C+ + + +QIH L A+ +LI +++
Sbjct: 96 EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLIS---MYWKC 152
Query: 80 FADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTF- 138
+ YA F IE NS +WN++I +++ D + A +F M G+ P ++TF
Sbjct: 153 IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS-AFRIFSSMQYDGS-RPTEYTFG 210
Query: 139 PFALKACAYLFA-FSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNML 197
AC+ +Q I K GL++D+++ + L+ +A G L A KVF+ M
Sbjct: 211 SLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 198 ERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILFE--PDGYTFQSITSACAGLATLSLGM 255
R+ V+ N ++ V+ + A KLF M + + P+ Y + LA +G+
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAE-EVGL 329
Query: 256 WAHAYILRHCDHSLVTDVLV--NNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILG 313
+ H + + D +V N L++MY KCGS+ AR+VF M +D SWNS+I G
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 314 FALHG-RAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNI 372
+G EA +Y + + P S T + LS+C G+ + + I
Sbjct: 390 LDQNGCFIEAVERY--KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL-KLGI 446
Query: 373 TPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASV 425
+ L+ L A G ++E + S+MP + D V W S++ A + S+
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGALARSERSL 498
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 178/389 (45%), Gaps = 19/389 (4%)
Query: 86 AFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKAC 145
A +VF ++ N +W ++ +R+ + K +A+V + M+++G + +++ F L+AC
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHK-EALVFLRDMVKEG-IFSNQYAFVSVLRAC 112
Query: 146 AYLFAFSQ--GKQAHAHIFKRGLVSDVYINNSLIHFYASC-GHLDLANKVFDNMLERSLV 202
+ + G+Q H +FK D ++N LI Y C G + A F ++ ++ V
Sbjct: 113 QEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSV 172
Query: 203 SWNVMIDAFVQFGEFDSALKLFRRMQI-LFEPDGYTFQSITSACAGLATLSLGMWAHAYI 261
SWN +I + Q G+ SA ++F MQ P YTF S+ + L + +
Sbjct: 173 SWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMC 232
Query: 262 LRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAE 321
L+TD+ V + L+ + K GSL AR+VF M R+ + N +++G E
Sbjct: 233 TIQ-KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGE 291
Query: 322 AALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSE-----GRDYFDVMINEYNITPVL 376
A K F + SP S +V +LS+ + E GR+ +I + ++
Sbjct: 292 EATKLFMDMNSMIDVSPES--YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMV 349
Query: 377 EHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVI 436
LV++ A+ G+I +A + M K D+V W S++ + + E V +
Sbjct: 350 GIGNGLVNMYAKCGSIADARRVFYFMTDK-DSVSWNSMITGLDQNGCFI---EAVERYKS 405
Query: 437 ESEGGICSGVYVLLSRVYASAR-RWNDVG 464
I G + L+S + + A +W +G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLG 434
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 184/387 (47%), Gaps = 22/387 (5%)
Query: 39 SLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIH-FASFADLDYAFRVFYQIENPN 97
SL E + + +++H + T L + I + +++ +A + A RVFY + + +
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDF--MVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 98 SFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQA 157
S +WN++I ++ +A+ ++ M + ++LP T +L +CA L G+Q
Sbjct: 380 SVSWNSMITGLDQN-GCFIEAVERYKSM-RRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 158 HAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGE- 216
H K G+ +V ++N+L+ YA G+L+ K+F +M E VSWN +I A +
Sbjct: 438 HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERS 497
Query: 217 FDSALKLFRRMQILFEP-DGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLV 275
A+ F Q + + TF S+ SA + L+ LG H L+ +++ +
Sbjct: 498 LPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK---NNIADEATT 554
Query: 276 NNSLIDMYCKCGSLDIARQVFESMP-KRDLTSWNSIILGFALHGRAEAALKYFDRLVVEE 334
N+LI Y KCG +D ++F M +RD +WNS+I G+ +H A +++
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY-IHNELLAKALDLVWFMLQT 613
Query: 335 SFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEH----YGCLVDLLARAG 390
+S + VLSA + G + ++ ++ LE LVD+ ++ G
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGME-----VHACSVRACLESDVVVGSALVDMYSKCG 668
Query: 391 NIDEALHLVSNMPMKPDAVIWRSLLDA 417
+D AL + MP++ ++ W S++
Sbjct: 669 RLDYALRFFNTMPVR-NSYSWNSMISG 694
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 116/239 (48%), Gaps = 20/239 (8%)
Query: 158 HAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEF 217
H+ ++K L DVY+ N+LI+ Y G A KVFD M R+ VSW ++ + + GE
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 218 DSALKLFRRM--QILFEPDGYTFQSITSACAGLATLSL--GMWAHAYILRHCDHSLVTDV 273
AL R M + +F + Y F S+ AC + ++ + G H + + S D
Sbjct: 84 KEALVFLRDMVKEGIF-SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK---LSYAVDA 139
Query: 274 LVNNSLIDMYCKC-GSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVV 332
+V+N LI MY KC GS+ A F + ++ SWNSII ++ G +A + F +
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 333 EESFSPNSITFVG-VLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAG 390
+ S P TF V +AC+ ++E DV + E I ++ G L DL +G
Sbjct: 200 DGS-RPTEYTFGSLVTTACS----LTEP----DVRLLE-QIMCTIQKSGLLTDLFVGSG 248
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/577 (36%), Positives = 330/577 (57%), Gaps = 18/577 (3%)
Query: 45 SMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIENPNSFTWNTL 104
S+S ++H L Q L I ++ +DYA +VF + + WN L
Sbjct: 92 SLSDALRVHRHILDNGSDQD--PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNAL 149
Query: 105 IRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACA----YLFAFSQGKQAHAH 160
RA + + + + L+ +M G V D+ T+ + LKAC + +GK+ HAH
Sbjct: 150 FRALTLAGHGE-EVLGLYWKMNRIG-VESDRFTYTYVLKACVASECTVNHLMKGKEIHAH 207
Query: 161 IFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSA 220
+ +RG S VYI +L+ YA G +D A+ VF M R++VSW+ MI + + G+ A
Sbjct: 208 LTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEA 267
Query: 221 LKLFRRMQILFE---PDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNN 277
L+ FR M + P+ T S+ ACA LA L G H YILR S++ V +
Sbjct: 268 LRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP---VIS 324
Query: 278 SLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFS 337
+L+ MY +CG L++ ++VF+ M RD+ SWNS+I + +HG + A++ F+ ++ + S
Sbjct: 325 ALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA-S 383
Query: 338 PNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALH 397
P +TFV VL AC+H G+V EG+ F+ M ++ I P +EHY C+VDLL RA +DEA
Sbjct: 384 PTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAK 443
Query: 398 LVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASA 457
+V +M +P +W SLL +C + H +V L+E ++++ E +G YVLL+ +YA A
Sbjct: 444 MVQDMRTEPGPKVWGSLLGSC-RIHGNVELAERASRRLFALEPK-NAGNYVLLADIYAEA 501
Query: 458 RRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKL 517
+ W++V V+KL+ +G+ K PG +E+ + F + D +P +QI+ FL + E +
Sbjct: 502 QMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDM 561
Query: 518 KSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDC 577
K +GY P ++ + + + K+ + HSE+LA+A G++N G PIR+ KNLR+C+DC
Sbjct: 562 KEKGYIPQ-TKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDC 620
Query: 578 HEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
H TK IS+ EI+VRD RFH FK+G CSC DYW
Sbjct: 621 HLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 17/322 (5%)
Query: 102 NTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHI 161
N LI++ + K QAI R++ Q + P + T+ + C + + S + H HI
Sbjct: 50 NQLIQSLCKEGKLK-QAI----RVLSQESS-PSQQTYELLILCCGHRSSLSDALRVHRHI 103
Query: 162 FKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSAL 221
G D ++ LI Y+ G +D A KVFD +R++ WN + A G + L
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 222 KLFRRM-QILFEPDGYTFQSITSACAG----LATLSLGMWAHAYILRHCDHSLVTDVLVN 276
L+ +M +I E D +T+ + AC + L G HA++ R + V +
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTR---RGYSSHVYIM 220
Query: 277 NSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVE-ES 335
+L+DMY + G +D A VF MP R++ SW+++I +A +G+A AL+ F ++ E +
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 336 FSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEA 395
SPNS+T V VL AC + +G+ ++ + +L LV + R G ++
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRR-GLDSILPVISALVTMYGRCGKLEVG 339
Query: 396 LHLVSNMPMKPDAVIWRSLLDA 417
+ M + D V W SL+ +
Sbjct: 340 QRVFDRMHDR-DVVSWNSLISS 360
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/596 (36%), Positives = 328/596 (55%), Gaps = 42/596 (7%)
Query: 50 KQIHAQALRTALPQQHKTLLIYSRIIH-FASFADLDYAFRVFYQIENPNSFTWNTLIR-- 106
KQIH Q ++ LL+ S +++ +A+ + A +VFY +++ N+ +N+L+
Sbjct: 159 KQIHGQVIKLGF---ESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 107 -ACARSVDA--------------------------KPQAIVLFQRMIEQGNVLPDKHTFP 139
AC DA +AI F+ M QG + D++ F
Sbjct: 216 LACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM-DQYPFG 274
Query: 140 FALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLER 199
L AC L A ++GKQ HA I + +Y+ ++LI Y C L A VFD M ++
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 200 SLVSWNVMIDAFVQFGEFDSALKLFRRMQ-ILFEPDGYTFQSITSACAGLATLSLGMWAH 258
++VSW M+ + Q G + A+K+F MQ +PD YT SACA +++L G H
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 259 AYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHG 318
+ L+ V V+NSL+ +Y KCG +D + ++F M RD SW +++ +A G
Sbjct: 395 G---KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 319 RAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEH 378
RA ++ FD++V + P+ +T GV+SAC+ G+V +G+ YF +M +EY I P + H
Sbjct: 452 RAVETIQLFDKMV-QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 379 YGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIES 438
Y C++DL +R+G ++EA+ ++ MP PDA+ W +LL AC + ++ + + A+ +IE
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC-RNKGNLEIGKWAAESLIEL 569
Query: 439 EGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDT 498
+ +G Y LLS +YAS +W+ V +R+ M +K V KEPG S I+ G H F A D
Sbjct: 570 DPHHPAG-YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDE 628
Query: 499 SHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILN 558
S P QIY L+ ++ K+ GY PD S D + K L HSERLAIA G++
Sbjct: 629 SSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHH-DVEEAVKVKMLNYHSERLAIAFGLIF 687
Query: 559 LKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
+ G PIRV KNLRVC DCH TK IS + EI+VRD RFH FKDG+CSC D+W
Sbjct: 688 VPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 229/518 (44%), Gaps = 105/518 (20%)
Query: 49 LKQIHAQALRTALPQQHKTLLIYSRIIH-FASFADLDYAFRVFYQIENPNSFTWNTLIRA 107
+K IH +R ALP + +Y+ I+H +A YA RVF +I PN F+WN L+ A
Sbjct: 25 VKMIHGNIIR-ALP--YPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLA 81
Query: 108 CAR---------SVDAKPQ---------------------AIVLFQRMIEQGNVLPDKHT 137
++ + + P A+ + M+ + + T
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 138 FPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNML 197
LK + S GKQ H + K G S + + + L++ YA+ G + A KVF +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 198 ERSLVSWNVMIDAFVQFGEFDSALKLFRRMQI---------------------------- 229
+R+ V +N ++ + G + AL+LFR M+
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 230 ---LFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHC--DHSLVTDVLVNNSLIDMYC 284
+ D Y F S+ AC GL ++ G HA I+R DH + V ++LIDMYC
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH-----IYVGSALIDMYC 316
Query: 285 KCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEES-FSPNSITF 343
KC L A+ VF+ M ++++ SW ++++G+ GRAE A+K F L ++ S P+ T
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF--LDMQRSGIDPDHYTL 374
Query: 344 VGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHY----GCLVDLLARAGNIDEALHLV 399
+SAC + + EG + + IT L HY LV L + G+ID++ L
Sbjct: 375 GQAISACANVSSLEEGSQF-----HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 400 SNMPMKPDAVIWRSLLDACC---KKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYAS 456
+ M ++ DAV W +++ A + ++ L +++ + ++ +G +GV SR
Sbjct: 430 NEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR---- 484
Query: 457 ARRWNDVGLVR------KLMTDK-GVTKEPGCSSIEID 487
GLV KLMT + G+ G S ID
Sbjct: 485 ------AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 137/327 (41%), Gaps = 40/327 (12%)
Query: 122 FQRMIEQGNV---LPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIH 178
+ +MI GN+ LP TF + + +A + +F R +++ N+L+
Sbjct: 24 YVKMI-HGNIIRALPYPETFLY--NNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLL 80
Query: 179 FYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILFEPD--GY 236
Y+ G + F+ + +R V+WNV+I+ + G +A+K + M F +
Sbjct: 81 AYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRV 140
Query: 237 TFQSITSACAGLATLSLGMWAHAYILR----------------HCDHSLVTD-------- 272
T ++ + +SLG H +++ + + ++D
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 273 ----VLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFD 328
++ NSL+ CG ++ A Q+F M K D SW ++I G A +G A+ A++ F
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 329 RLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLAR 388
+ V + + F VL AC G ++EG+ +I N + L+D+ +
Sbjct: 260 EMKV-QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGSALIDMYCK 317
Query: 389 AGNIDEALHLVSNMPMKPDAVIWRSLL 415
+ A + M K + V W +++
Sbjct: 318 CKCLHYAKTVFDRMKQK-NVVSWTAMV 343
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 139/339 (41%), Gaps = 58/339 (17%)
Query: 20 IFNNNRNEGSFNNHSSLLSSLTECKSMSQLK---QIHAQALRTALPQQHKTLLIYSRIIH 76
IF + + G +H +L +++ C ++S L+ Q H +A+ + L H + S +
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI--HYVTVSNSLVTL 415
Query: 77 FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKH 136
+ D+D + R+F ++ ++ +W ++ A A+ A + I LF +M++ G + PD
Sbjct: 416 YGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA-VETIQLFDKMVQHG-LKPDGV 473
Query: 137 TFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNM 196
T + AC+ +G++ + + + S+ I S+ H+ SC
Sbjct: 474 TLTGVISACSRAGLVEKGQR-----YFKLMTSEYGIVPSIGHY--SC------------- 513
Query: 197 LERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILFEPDGYTFQSITSACAGLATLSLGMW 256
MID F + G + A++ M F PD + ++ SAC L +G W
Sbjct: 514 ----------MIDLFSRSGRLEEAMRFINGMP--FPPDAIGWTTLLSACRNKGNLEIGKW 561
Query: 257 AHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESM--------PKRDLTSWN 308
A ++ H L+++ +Y G D Q+ M P + W
Sbjct: 562 AAESLIELDPHHPAGYTLLSS----IYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWK 617
Query: 309 SIILGFALHGRAE-------AALKYFDRLVVEESFSPNS 340
+ F+ + A L+ + +++ + P++
Sbjct: 618 GKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDT 656
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/541 (38%), Positives = 312/541 (57%), Gaps = 13/541 (2%)
Query: 77 FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKH 136
+A L+ A ++F ++ +S++W ++ + D +A+VL+ M N P+
Sbjct: 161 YAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKK-DQPEEALVLYSLMQRVPNSRPNIF 219
Query: 137 TFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNM 196
T A+ A A + +GK+ H HI + GL SD + +SL+ Y CG +D A +FD +
Sbjct: 220 TVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI 279
Query: 197 LERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILFE-PDGYTFQSITSACAGLATLSLGM 255
+E+ +VSW MID + + + LF + E P+ YTF + +ACA L T LG
Sbjct: 280 VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGK 339
Query: 256 WAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFA 315
H Y+ R ++SL+DMY KCG+++ A+ V + PK DL SW S+I G A
Sbjct: 340 QVHGYMTRV---GFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCA 396
Query: 316 LHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPV 375
+G+ + ALKYFD L+++ P+ +TFV VLSAC H G+V +G ++F + ++ ++
Sbjct: 397 QNGQPDEALKYFD-LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHT 455
Query: 376 LEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQV 435
+HY CLVDLLAR+G ++ ++S MPMKP +W S+L C + ++ L+EE A+++
Sbjct: 456 SDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGC-STYGNIDLAEEAAQEL 514
Query: 436 --IESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEF 493
IE E + YV ++ +YA+A +W + G +RK M + GVTK PG S EI H F
Sbjct: 515 FKIEPENPV---TYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVF 571
Query: 494 FAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIA 553
A DTSHP QI FL + +K+K GY P S + D D+ K+ +L HSE+LA+A
Sbjct: 572 IAADTSHPMYNQIVEFLRELRKKMKEEGYVPATS-LVLHDVEDEQKEENLVYHSEKLAVA 630
Query: 554 LGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDY 613
IL+ + G I+VFKNLR C DCH K IS I +I VRD RFH F++G CSC DY
Sbjct: 631 FAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDY 690
Query: 614 W 614
W
Sbjct: 691 W 691
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 146/324 (45%), Gaps = 45/324 (13%)
Query: 133 PDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKV 192
P T+ ++ C+ A +GK+ H HI G V + I N L+ YA CG L A KV
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 193 FDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILFEPDGYTF-------------- 238
FD M R L SWNVM++ + + G + A KLF M E D Y++
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT---EKDSYSWTAMVTGYVKKDQPE 199
Query: 239 ---------QSITSACAGLATLSL-------------GMWAHAYILRHCDHSLVTDVLVN 276
Q + ++ + T+S+ G H +I+R L +D ++
Sbjct: 200 EALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVR---AGLDSDEVLW 256
Query: 277 NSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESF 336
+SL+DMY KCG +D AR +F+ + ++D+ SW S+I + R F L V
Sbjct: 257 SSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL-VGSCE 315
Query: 337 SPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEAL 396
PN TF GVL+AC G+ M P LVD+ + GNI+ A
Sbjct: 316 RPNEYTFAGVLNACADLTTEELGKQVHGYM-TRVGFDPYSFASSSLVDMYTKCGNIESAK 374
Query: 397 HLVSNMPMKPDAVIWRSLLDACCK 420
H+V P KPD V W SL+ C +
Sbjct: 375 HVVDGCP-KPDLVSWTSLIGGCAQ 397
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/600 (36%), Positives = 341/600 (56%), Gaps = 20/600 (3%)
Query: 22 NNNRNEGSF-----NNHSSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIH 76
++N EGS+ +++LL T K + Q + +HA L++ +H ++ + +
Sbjct: 47 SSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIF--RHDIVMGNTLLNM 104
Query: 77 FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKH 136
+A L+ A +VF ++ + TW TLI ++ D A++ F +M+ G P++
Sbjct: 105 YAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH-DRPCDALLFFNQMLRFG-YSPNEF 162
Query: 137 TFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNM 196
T +KA A G Q H K G S+V++ ++L+ Y G +D A VFD +
Sbjct: 163 TLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL 222
Query: 197 LERSLVSWNVMIDAFVQFGEFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSLGM 255
R+ VSWN +I + + AL+LF+ M + F P +++ S+ AC+ L G
Sbjct: 223 ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK 282
Query: 256 WAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFA 315
W HAY+++ + LV N+L+DMY K GS+ AR++F+ + KRD+ SWNS++ +A
Sbjct: 283 WVHAYMIKSGE-KLVA--FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA 339
Query: 316 LHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPV 375
HG + A+ +F+ + PN I+F+ VL+AC+H G++ EG Y+++M + I P
Sbjct: 340 QHGFGKEAVWWFEEMR-RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPE 397
Query: 376 LEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQV 435
HY +VDLL RAG+++ AL + MP++P A IW++LL+AC + H + L A+ V
Sbjct: 398 AWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC-RMHKNTELGAYAAEHV 456
Query: 436 IESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFA 495
E + G +V+L +YAS RWND VRK M + GV KEP CS +EI+ H F A
Sbjct: 457 FELDPDD-PGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVA 515
Query: 496 GDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAM-VDELDDGKQSSLRLHSERLAIAL 554
D HPQ ++I + + K+K GY PD S + VD+ + ++ +L+ HSE++A+A
Sbjct: 516 NDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE--REVNLQYHSEKIALAF 573
Query: 555 GILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
+LN PG I + KN+RVC DCH KL S++ EIIVRD RFHHFKDG+CSC DYW
Sbjct: 574 ALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/574 (36%), Positives = 331/574 (57%), Gaps = 17/574 (2%)
Query: 46 MSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFAD-LDYAFRVFYQIENPNSFTWNTL 104
+ QL+Q+HA + T + L +++I A A + Y +F + P+ F +N++
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLL---TKLITLACSARAIAYTHLLFLSVPLPDDFLFNSV 78
Query: 105 IRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKR 164
I++ ++ P V + R + NV P +TF +K+CA L A GK H H
Sbjct: 79 IKSTSKL--RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVS 136
Query: 165 GLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLF 224
G D Y+ +L+ FY+ CG ++ A +VFD M E+S+V+WN ++ F Q G D A+++F
Sbjct: 137 GFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVF 196
Query: 225 RRM-QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMY 283
+M + FEPD TF S+ SACA +SLG W H YI+ L +V + +LI++Y
Sbjct: 197 YQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII---SEGLDLNVKLGTALINLY 253
Query: 284 CKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITF 343
+CG + AR+VF+ M + ++ +W ++I + HG + A++ F+++ + PN++TF
Sbjct: 254 SRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTF 313
Query: 344 VGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMP 403
V VLSAC H G+V EGR + M Y + P +EH+ C+VD+L RAG +DEA + +
Sbjct: 314 VAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLD 373
Query: 404 MKPDAV---IWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRW 460
A +W ++L A CK H + L E+AK++I E G +V+LS +YA + +
Sbjct: 374 ATGKATAPALWTAMLGA-CKMHRNYDLGVEIAKRLIALEPD-NPGHHVMLSNIYALSGKT 431
Query: 461 NDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSR 520
++V +R M + K+ G S IE++ + F GD SH +T +IY +L+ + + K
Sbjct: 432 DEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEI 491
Query: 521 GYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEV 580
GY P S+ M ++ K+ +LR HSE+LA+A G+L + I + KNLR+C+DCH
Sbjct: 492 GYAP-VSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLK-TVDVAITIVKNLRICEDCHSA 549
Query: 581 TKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
K IS + N +I VRD+ RFHHF++GSCSC+DYW
Sbjct: 550 FKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/571 (36%), Positives = 324/571 (56%), Gaps = 13/571 (2%)
Query: 46 MSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIENPNSFTWNTLI 105
+ LK++H +L+ + L+ + + +A L YA RVF+ I + +WN LI
Sbjct: 411 LPSLKELHCYSLKQEFV--YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI 468
Query: 106 RACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRG 165
A+S D + Q I +LPD T L AC+ L + GK+ H I +
Sbjct: 469 GGHAQSNDPRLSLDAHLQMKIS--GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 166 LVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFR 225
L D+++ S++ Y CG L +FD M ++SLVSWN +I ++Q G D AL +FR
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 226 RMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYC 284
+M + + G + + AC+ L +L LG AHAY L+H L D + SLIDMY
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL---LEDDAFIACSLIDMYA 643
Query: 285 KCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFV 344
K GS+ + +VF + ++ SWN++I+G+ +HG A+ A+K F+ + +P+ +TF+
Sbjct: 644 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQ-RTGHNPDDLTFL 702
Query: 345 GVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSN-MP 403
GVL+ACNH G++ EG Y D M + + + P L+HY C++D+L RAG +D+AL +V+ M
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Query: 404 MKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDV 463
+ D IW+SLL +C + H ++ + E+VA ++ E E YVLLS +YA +W DV
Sbjct: 763 EEADVGIWKSLLSSC-RIHQNLEMGEKVAAKLFELEPEKPEN-YVLLSNLYAGLGKWEDV 820
Query: 464 GLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYT 523
VR+ M + + K+ GCS IE++ F G+ ++I +++ K+ GY
Sbjct: 821 RKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYR 880
Query: 524 PDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKL 583
PD + + D ++ K LR HSE+LA+ G++ G IRV+KNLR+C DCH KL
Sbjct: 881 PD-TMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKL 939
Query: 584 ISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
IS++ EI+VRD RFHHFK+G CSC DYW
Sbjct: 940 ISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 159/324 (49%), Gaps = 11/324 (3%)
Query: 36 LLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIEN 95
LL + + K + ++IH Q + + ++ +L I +A D + VF + +
Sbjct: 90 LLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 96 PNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGK 155
N F WN +I + +R+ + + + F MI ++LPD T+P +KACA + G
Sbjct: 149 KNLFQWNAVISSYSRN-ELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 156 QAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFG 215
H + K GLV DV++ N+L+ FY + G + A ++FD M ER+LVSWN MI F G
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 216 EFDSALKLFRRMQI-----LFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLV 270
+ + L M F PD T ++ CA + LG H + ++ L
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK---LRLD 324
Query: 271 TDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRL 330
++++NN+L+DMY KCG + A+ +F+ +++ SWN+++ GF+ G ++
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 331 VV-EESFSPNSITFVGVLSACNHR 353
+ E + +T + + C H
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHE 408
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 186/390 (47%), Gaps = 20/390 (5%)
Query: 34 SSLLSSLTECKSMSQL---KQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVF 90
++L++ L C ++ K +H A++ L ++ +L + + ++ + A +F
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE--LVLNNALMDMYSKCGCITNAQMIF 350
Query: 91 YQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFA 150
N N +WNT++ + D VL Q + +V D+ T A+ C +
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 151 FSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDA 210
K+ H + K+ V + + N+ + YA CG L A +VF + +++ SWN +I
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 211 FVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSL 269
Q + +L +M+I PD +T S+ SAC+ L +L LG H +I+R+ L
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW---L 527
Query: 270 VTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDR 329
D+ V S++ +Y CG L + +F++M + L SWN++I G+ +G + AL F +
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 330 LVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEH---YGC-LVDL 385
+V+ I+ + V AC+ + GR+ + Y + +LE C L+D+
Sbjct: 588 MVL-YGIQLCGISMMPVFGACSLLPSLRLGRE-----AHAYALKHLLEDDAFIACSLIDM 641
Query: 386 LARAGNIDEALHLVSNMPMKPDAVIWRSLL 415
A+ G+I ++ + + + K A W +++
Sbjct: 642 YAKNGSITQSSKVFNGLKEKSTAS-WNAMI 670
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/587 (37%), Positives = 334/587 (56%), Gaps = 21/587 (3%)
Query: 34 SSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQI 93
SS+L + + +S K I+ L+ + I + +A D+ A VF +
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDV--YAKCGDMITARDVFNSM 368
Query: 94 ENPNSFTWNTLIRACARSVDAKPQAIVLFQRMI---EQGNVLPDKHTFPFALKACAYLFA 150
E ++ +WN++I +S D +A+ LF+ M+ EQ D T+ + L
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLM-EAMKLFKMMMIMEEQA----DHITYLMLISVSTRLAD 423
Query: 151 FSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDA 210
GK H++ K G+ D+ ++N+LI YA CG + + K+F +M V+WN +I A
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483
Query: 211 FVQFGEFDSALKL---FRRMQILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDH 267
V+FG+F + L++ R+ +++ PD TF CA LA LG H +LR
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVV--PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYE 541
Query: 268 SLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYF 327
S ++ + N+LI+MY KCG L+ + +VFE M +RD+ +W +I + ++G E AL+ F
Sbjct: 542 S---ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETF 598
Query: 328 DRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLA 387
+ + P+S+ F+ ++ AC+H G+V EG F+ M Y I P++EHY C+VDLL+
Sbjct: 599 ADME-KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLS 657
Query: 388 RAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVY 447
R+ I +A + MP+KPDA IW S+L AC + + +E V++++IE G
Sbjct: 658 RSQKISKAEEFIQAMPIKPDASIWASVLRAC-RTSGDMETAERVSRRIIELNPDD-PGYS 715
Query: 448 VLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIY 507
+L S YA+ R+W+ V L+RK + DK +TK PG S IE+ H F +GD S PQ++ IY
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIY 775
Query: 508 GFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRV 567
L+++ + GY PD + + E ++ K+ + HSERLAIA G+LN +PG P++V
Sbjct: 776 KSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQV 835
Query: 568 FKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
KNLRVC DCHEVTKLIS+I EI+VRD RFH FKDG+CSC D W
Sbjct: 836 MKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 194/383 (50%), Gaps = 17/383 (4%)
Query: 39 SLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIE-NPN 97
+L+ ++++L++IHA L +L I ++ F + + VF ++ N
Sbjct: 13 ALSSSSNLNELRRIHA--LVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 98 SFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQA 157
+ WN++IRA +++ P+A+ + ++ E V PDK+TFP +KACA LF G
Sbjct: 71 VYLWNSIIRAFSKN-GLFPEALEFYGKLRES-KVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 158 HAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEF 217
+ I G SD+++ N+L+ Y+ G L A +VFD M R LVSWN +I + G +
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 218 DSALKLFRRMQ-ILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVN 276
+ AL+++ ++ PD +T S+ A L + G H + L+ + + V+VN
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK---SGVNSVVVVN 245
Query: 277 NSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESF 336
N L+ MY K AR+VF+ M RD S+N++I G+ E +++ F L + F
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQF 303
Query: 337 SPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHY--GCLVDLLARAGNIDE 394
P+ +T VL AC H +S + ++ M+ VLE L+D+ A+ G++
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA---GFVLESTVRNILIDVYAKCGDMIT 360
Query: 395 ALHLVSNMPMKPDAVIWRSLLDA 417
A + ++M K D V W S++
Sbjct: 361 ARDVFNSMECK-DTVSWNSIISG 382
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 163/333 (48%), Gaps = 10/333 (3%)
Query: 86 AFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKAC 145
A RVF +++ +S ++NT+I + ++ +++ +F ++Q PD T L+AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLK-LEMVEESVRMFLENLDQFK--PDLLTVSSVLRAC 317
Query: 146 AYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWN 205
+L S K + ++ K G V + + N LI YA CG + A VF++M + VSWN
Sbjct: 318 GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWN 377
Query: 206 VMIDAFVQFGEFDSALKLFRRMQILFE-PDGYTFQSITSACAGLATLSLGMWAHAYILRH 264
+I ++Q G+ A+KLF+ M I+ E D T+ + S LA L G H+ ++
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK- 436
Query: 265 CDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAAL 324
+ D+ V+N+LIDMY KCG + + ++F SM D +WN++I G L
Sbjct: 437 --SGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL 494
Query: 325 KYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVD 384
+ ++ E P+ TF+ L C G++ ++ + L+ L++
Sbjct: 495 QVTTQMRKSE-VVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNALIE 552
Query: 385 LLARAGNIDEALHLVSNMPMKPDAVIWRSLLDA 417
+ ++ G ++ + + M + D V W ++ A
Sbjct: 553 MYSKCGCLENSSRVFERMSRR-DVVTWTGMIYA 584
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 12/227 (5%)
Query: 139 PFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLI----HFYASCGHLDLANKVFD 194
PF +A + ++ ++ HA + GL S + + LI HF L + +V
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 195 NMLERSLVSWNVMIDAFVQFGEFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSL 253
+++ WN +I AF + G F AL+ + ++ + PD YTF S+ ACAGL +
Sbjct: 68 ---AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 254 GMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILG 313
G + IL D +D+ V N+L+DMY + G L ARQVF+ MP RDL SWNS+I G
Sbjct: 125 GDLVYEQIL---DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 314 FALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGR 360
++ HG E AL+ + L P+S T VL A + +V +G+
Sbjct: 182 YSSHGYYEEALEIYHEL-KNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/615 (35%), Positives = 324/615 (52%), Gaps = 41/615 (6%)
Query: 34 SSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQI 93
SSL+S L +C +++Q+KQIH LR L Q L R + YA RV +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 94 ENPNSFTWNTLIRACARSVDAK-PQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFS 152
+ N F W +IR A ++ K +AI ++ M ++ + P TF LKAC + +
Sbjct: 110 QFRNPFLWTAVIRGYA--IEGKFDEAIAMYGCMRKE-EITPVSFTFSALLKACGTMKDLN 166
Query: 153 QGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFV 212
G+Q HA F+ VY+ N++I Y C +D A KVFD M ER ++SW +I A+
Sbjct: 167 LGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYA 226
Query: 213 QFGEFDSALKLF--------------------------------RRMQILFEPDGYTFQS 240
+ G + A +LF R + D T
Sbjct: 227 RVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 241 ITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMP 300
SACA L A I + +S V++ ++LIDMY KCG+++ A VF SM
Sbjct: 287 YISACAQLGASKYADRA-VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN 345
Query: 301 KRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGR 360
+++ +++S+ILG A HGRA+ AL F +V + PN++TFVG L AC+H G+V +GR
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 361 DYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCK 420
FD M + + P +HY C+VDLL R G + EAL L+ M ++P +W +LL A C+
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGA-CR 464
Query: 421 KHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPG 480
H + ++E A+ + E E I G Y+LLS VYASA W V VRKL+ +KG+ K P
Sbjct: 465 IHNNPEIAEIAAEHLFELEPDII-GNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPA 523
Query: 481 CS-SIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGK 539
S ++ +G H+FF G+ +HP + +I L+ + E+L GY PD S D D+ K
Sbjct: 524 VSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVP-YDVSDNAK 582
Query: 540 QSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRAR 599
+ L H+E+LA+A +L I + KNLR+C DCH+ +L S + II+RD R
Sbjct: 583 RLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMR 642
Query: 600 FHHFKDGSCSCMDYW 614
FHHF+ G CSC D+W
Sbjct: 643 FHHFRSGDCSCGDFW 657
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/617 (35%), Positives = 339/617 (54%), Gaps = 17/617 (2%)
Query: 3 VAIVQGGPPTPQTHSHSIFNNNRNEGSFNNHSSLLSSLTECKSMSQLK---QIHAQALRT 59
V +V G +S IF + E N + S L C + L+ QIH+Q ++T
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 60 ALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAI 119
Q + I +A LD A+ + + + +W T+I A + +A+
Sbjct: 520 NF--QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI-AGYTQYNFDDKAL 576
Query: 120 VLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHF 179
F++M+++G + D+ A+ ACA L A +G+Q HA G SD+ N+L+
Sbjct: 577 TTFRQMLDRG-IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 180 YASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRM-QILFEPDGYTF 238
Y+ CG ++ + F+ ++WN ++ F Q G + AL++F RM + + + +TF
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 239 QSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFES 298
S A + A + G HA I + S + V N+LI MY KCGS+ A + F
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDS---ETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 299 MPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSE 358
+ ++ SWN+II ++ HG AL FD+++ + PN +T VGVLSAC+H G+V +
Sbjct: 753 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI-HSNVRPNHVTLVGVLSACSHIGLVDK 811
Query: 359 GRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDAC 418
G YF+ M +EY ++P EHY C+VD+L RAG + A + MP+KPDA++WR+LL AC
Sbjct: 812 GIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC 871
Query: 419 CKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKE 478
H ++ + E A ++E E S YVLLS +YA +++W+ L R+ M +KGV KE
Sbjct: 872 V-VHKNMEIGEFAAHHLLELEPED-SATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKE 929
Query: 479 PGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELD-D 537
PG S IE+ H F+ GD +HP +I+ + + ++ GY D ++++EL +
Sbjct: 930 PGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDC--FSLLNELQHE 987
Query: 538 GKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDR 597
K + +HSE+LAI+ G+L+L +PI V KNLRVC DCH K +S++ N EIIVRD
Sbjct: 988 QKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDA 1047
Query: 598 ARFHHFKDGSCSCMDYW 614
RFHHF+ G+CSC DYW
Sbjct: 1048 YRFHHFEGGACSCKDYW 1064
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 193/400 (48%), Gaps = 18/400 (4%)
Query: 25 RNEGSFNNHSSLLSSLTEC----KSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASF 80
N G NH +L L C S+ + +++H+Q L+ L + ++ F F
Sbjct: 76 ENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNG---CLSEKLFDFYLF 132
Query: 81 -ADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFP 139
DL AF+VF ++ FTWN +I+ A S + + LF RM+ + NV P++ TF
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELA-SRNLIGEVFGLFVRMVSE-NVTPNEGTFS 190
Query: 140 FALKAC-AYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLE 198
L+AC AF +Q HA I +GL + N LI Y+ G +DLA +VFD +
Sbjct: 191 GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
Query: 199 RSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWA 257
+ SW MI + A++LF M +L P Y F S+ SAC + +L +G
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 258 HAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALH 317
H +L+ +D V N+L+ +Y G+L A +F +M +RD ++N++I G +
Sbjct: 311 HGLVLK---LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 318 GRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLE 377
G E A++ F R+ + + P+S T ++ AC+ G + G+ + +
Sbjct: 368 GYGEKAMELFKRMHL-DGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNNK 425
Query: 378 HYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDA 417
G L++L A+ +I+ AL ++ + V+W +L A
Sbjct: 426 IEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVA 464
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 189/405 (46%), Gaps = 33/405 (8%)
Query: 22 NNNRNEGSFNNHSSLLSSLTECKSMSQ----LKQIHA----QALRTALPQQHKTLLIYSR 73
N NEG+F+ L C+ S ++QIHA Q LR + + + +YSR
Sbjct: 181 NVTPNEGTFS------GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR 234
Query: 74 IIHFASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLP 133
F DL A RVF + + +W +I +++ + + +AI LF M G ++P
Sbjct: 235 ----NGFVDL--ARRVFDGLRLKDHSSWVAMISGLSKN-ECEAEAIRLFCDMYVLG-IMP 286
Query: 134 DKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVF 193
+ F L AC + + G+Q H + K G SD Y+ N+L+ Y G+L A +F
Sbjct: 287 TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 194 DNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQI-LFEPDGYTFQSITSACAGLATLS 252
NM +R V++N +I+ Q G + A++LF+RM + EPD T S+ AC+ TL
Sbjct: 347 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLF 406
Query: 253 LGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIIL 312
G HAY + ++ + +L+++Y KC ++ A F ++ WN +++
Sbjct: 407 RGQQLHAYTTK---LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 313 GFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNI 372
+ L + + F ++ +EE PN T+ +L C G + G +I
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEE-IVPNQYTYPSILKTCIRLGDLELGEQIHSQII---KT 519
Query: 373 TPVLEHYGC--LVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLL 415
L Y C L+D+ A+ G +D A ++ K D V W +++
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMI 563
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 138/298 (46%), Gaps = 15/298 (5%)
Query: 126 IEQGNVLPDKHTFPFALKACAYL-FAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCG 184
+E + P+ T + L+ C + +G++ H+ I K GL S+ ++ L FY G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 185 HLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRM-QILFEPDGYTFQSITS 243
L A KVFD M ER++ +WN MI LF RM P+ TF +
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 244 AC-AGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKR 302
AC G + HA IL L +V N LID+Y + G +D+AR+VF+ + +
Sbjct: 195 ACRGGSVAFDVVEQIHARILY---QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 303 DLTSWNSIILGFALHG-RAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRD 361
D +SW ++I G + + AEA + D V+ P F VLSAC + G
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVL--GIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 362 YFDVMINEYNITPVLEHYGC--LVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDA 417
+++ + + Y C LV L GN+ A H+ SNM + DAV + +L++
Sbjct: 310 LHGLVL---KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLING 363
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 231/649 (35%), Positives = 343/649 (52%), Gaps = 67/649 (10%)
Query: 20 IFNNNRNE-GSFNNHSSLLSSLTECKSM---SQLKQIHAQALRTALPQQHKTLLIYSRII 75
+F+ NE G ++ +L++ L C S+ S KQ+H A+ + + Q + + + ++
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN---MFVGNCLV 271
Query: 76 H-FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQ------ 128
+A +D A VF + + +WN ++ A + A+ LF++M E+
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMV-AGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 129 ----------------------------GNVLPDKHTFPFALKACAYLFAFSQGKQAHAH 160
+ P++ T L CA + A GK+ H +
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 161 -------IFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNM--LERSLVSWNVMIDAF 211
+ K G + + N LI YA C +D A +FD++ ER +V+W VMI +
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 212 VQFGEFDSALKLFRRMQILFE------PDGYTFQSITSACAGLATLSLGMWAHAYILRHC 265
Q G+ + AL+L M FE P+ +T ACA LA L +G HAY LR+
Sbjct: 451 SQHGDANKALELLSEM---FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 266 DHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALK 325
+++ + V+N LIDMY KCGS+ AR VF++M ++ +W S++ G+ +HG E AL
Sbjct: 508 QNAV--PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 326 YFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDL 385
FD + F + +T + VL AC+H GM+ +G +YF+ M + ++P EHY CLVDL
Sbjct: 566 IFDEMR-RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 386 LARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSG 445
L RAG ++ AL L+ MPM+P V+W + L +CC+ H V L E A+++ E G
Sbjct: 625 LGRAGRLNAALRLIEEMPMEPPPVVWVAFL-SCCRIHGKVELGEYAAEKITELASNH-DG 682
Query: 446 VYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQ 505
Y LLS +YA+A RW DV +R LM KGV K PGCS +E FF GD +HP K+
Sbjct: 683 SYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKE 742
Query: 506 IYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPI 565
IY L +++K GY P+ + A+ D D+ K L HSE+LA+A GIL G I
Sbjct: 743 IYQVLLDHMQRIKDIGYVPE-TGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAI 801
Query: 566 RVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
R+ KNLRVC DCH +SRI + +II+RD +RFHHFK+GSCSC YW
Sbjct: 802 RITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 197/418 (47%), Gaps = 51/418 (12%)
Query: 42 ECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIENPNSFTW 101
+CK++SQ+K IH + L + + T + S I + R F + + W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRF-PPSDAGVYHW 95
Query: 102 NTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHI 161
N+LIR+ + A + + LF M + PD +TFPF KAC + + G+ AHA
Sbjct: 96 NSLIRSYGDNGCAN-KCLYLFGLM-HSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 162 FKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSAL 221
G +S+V++ N+L+ Y+ C L A KVFD M +VSWN +I+++ + G+ AL
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 222 KLFRRMQILF--EPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSL 279
++F RM F PD T ++ CA L T SLG H + + ++ ++ V N L
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV---TSEMIQNMFVGNCL 270
Query: 280 IDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEE----- 334
+DMY KCG +D A VF +M +D+ SWN+++ G++ GR E A++ F+++ E+
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 335 -----------------------------SFSPNSITFVGVLSACNHRGMVSEGRDYFDV 365
PN +T + VLS C G + G++
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 366 MINEYNITPVLEHYG-------CLVDLLARAGNIDEALHLVSNM-PMKPDAVIWRSLL 415
I +Y I +G L+D+ A+ +D A + ++ P + D V W ++
Sbjct: 391 AI-KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/651 (34%), Positives = 344/651 (52%), Gaps = 89/651 (13%)
Query: 37 LSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFA-SFAD-LDYAFRVFYQIE 94
LS L CK++ L QIH ++ + + I+H A S +D L YA R+
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTD--SYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 95 NPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQG 154
P++F +NTL+R + S D ++ +F M+ +G V PD +F F +KA + G
Sbjct: 67 EPDAFMFNTLVRGYSES-DEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 155 KQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLV------------ 202
Q H K GL S +++ +LI Y CG ++ A KVFD M + +LV
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 203 -------------------SWNVMIDAFVQFGEFDSALKLFRRM---------------- 227
SWNVM+ +++ GE +SA ++F M
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 228 ----------------QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVT 271
+ P+ + + SAC+ + G H ++ + +S +
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK-AGYSWI- 303
Query: 272 DVLVNNSLIDMYCKCGSLDIARQVFESM-PKRDLTSWNSIILGFALHGRAEAALKYFDRL 330
V VNN+LIDMY +CG++ +AR VFE M KR + SW S+I G A+HG+ E A++ F+ +
Sbjct: 304 -VSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
Query: 331 VVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAG 390
+P+ I+F+ +L AC+H G++ EG DYF M Y+I P +EHYGC+VDL R+G
Sbjct: 363 TAY-GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSG 421
Query: 391 NIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLL 450
+ +A + MP+ P A++WR+LL AC H ++ L+E+V +++ E + SG VLL
Sbjct: 422 KLQKAYDFICQMPIPPTAIVWRTLLGAC-SSHGNIELAEQVKQRLNELDPN-NSGDLVLL 479
Query: 451 SRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDT-------SHPQT 503
S YA+A +W DV +RK M + + K S +E+ ++F AG+ +H +
Sbjct: 480 SNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKL 539
Query: 504 KQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGM 563
K+I L L DE GYTP+ + +A+ D ++ K+ + HSE+LA+A + L G
Sbjct: 540 KEI--ILRLKDEA----GYTPEVA-SALYDVEEEEKEDQVSKHSEKLALAFALARLSKGA 592
Query: 564 PIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
IR+ KNLR+C+DCH V KL S+++ VEI+VRDR RFH FKDGSCSC DYW
Sbjct: 593 NIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/629 (34%), Positives = 342/629 (54%), Gaps = 53/629 (8%)
Query: 25 RNEGSFNNHSSLLSSLTECKSMSQLK---QIHAQALRTALPQQHKTLLIYSRIIHFASFA 81
R+E N +++ ++ C + L+ +++A + + + L++ + + +
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI--EVNDLMVSALVDMYMKCN 285
Query: 82 DLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFA 141
+D A R+F + N N + R + +A+ +F M++ G V PD+ + A
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR-EALGVFNLMMDSG-VRPDRISMLSA 343
Query: 142 LKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSL 201
+ +C+ L GK H ++ + G S I N+LI Y C D A ++FD M +++
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 202 VSWNVMIDAFVQFGEFDSALKLFRRMQ-----------------ILFE------------ 232
V+WN ++ +V+ GE D+A + F M LFE
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Query: 233 ----PDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGS 288
DG T SI SAC L L L W + YI ++ + DV + +L+DM+ +CG
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN---GIQLDVRLGTTLVDMFSRCGD 520
Query: 289 LDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLS 348
+ A +F S+ RD+++W + I A+ G AE A++ FD ++ E+ P+ + FVG L+
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI-EQGLKPDGVAFVGALT 579
Query: 349 ACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDA 408
AC+H G+V +G++ F M+ + ++P HYGC+VDLL RAG ++EA+ L+ +MPM+P+
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 409 VIWRSLLDACCKKHASVVLSEEVAK--QVIESEGGICSGVYVLLSRVYASARRWNDVGLV 466
VIW SLL A C+ +V ++ A+ QV+ E +G YVLLS VYASA RWND+ V
Sbjct: 640 VIWNSLL-AACRVQGNVEMAAYAAEKIQVLAPER---TGSYVLLSNVYASAGRWNDMAKV 695
Query: 467 RKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDY 526
R M +KG+ K PG SSI+I G HEF +GD SHP+ I LD + ++ G+ PD
Sbjct: 696 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 755
Query: 527 SQAAM-VDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLIS 585
S M VDE + K L HSE+LA+A G+++ G IR+ KNLRVC DCH K S
Sbjct: 756 SNVLMDVDEKE--KIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFAS 813
Query: 586 RIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
+++N EII+RD RFH+ + G CSC D+W
Sbjct: 814 KVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 193/386 (50%), Gaps = 20/386 (5%)
Query: 38 SSLTECKSMSQLKQIHAQALRTALPQQHKTLL-IYSRIIHFASFADLDYAFRVFYQIENP 96
SSL CK++ +LK H + L T+ + +R + L +A VF E+
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 97 NS-FTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGK 155
+ F +N+LIR A S +AI+LF RM+ G + PDK+TFPF L ACA A G
Sbjct: 97 GTCFMYNSLIRGYASS-GLCNEAILLFLRMMNSG-ISPDKYTFPFGLSACAKSRAKGNGI 154
Query: 156 QAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFG 215
Q H I K G D+++ NSL+HFYA CG LD A KVFD M ER++VSW MI + +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 216 EFDSALKLFRRMQILFE--PDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDV 273
A+ LF RM E P+ T + SACA L L G +A+I V D+
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE--VNDL 272
Query: 274 LVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVE 333
+V ++L+DMY KC ++D+A+++F+ +L N++ + G AL F+ L+++
Sbjct: 273 MV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN-LMMD 330
Query: 334 ESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHY----GCLVDLLARA 389
P+ I+ + +S+C+ + G+ + Y + E + L+D+ +
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKS-----CHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 390 GNIDEALHLVSNMPMKPDAVIWRSLL 415
D A + M K V W S++
Sbjct: 386 HRQDTAFRIFDRMSNKT-VVTWNSIV 410
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 225/612 (36%), Positives = 320/612 (52%), Gaps = 83/612 (13%)
Query: 77 FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKH 136
+AS D+ A +VF +I N N +IR+ + + + +F M NV PD +
Sbjct: 84 YASLKDVASARKVFDEIPERNVIIINVMIRSYVNN-GFYGEGVKVFGTMC-GCNVRPDHY 141
Query: 137 TFPFALKACAYLFAFSQGKQAHAHIFKRGLVS---------------------------- 168
TFP LKAC+ G++ H K GL S
Sbjct: 142 TFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 169 ---DVYINNSLIHFYASCGHLDLANKV--------------------------------- 192
DV NSL+ YA D A +V
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMY 261
Query: 193 ----FDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQI-LFEPDGYTFQSITSACAG 247
F M ++SLVSWNVMI +++ A++L+ RM+ FEPD + S+ AC
Sbjct: 262 VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 248 LATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSW 307
+ LSLG H YI R L+ ++L+ N+LIDMY KCG L+ AR VFE+M RD+ SW
Sbjct: 322 TSALSLGKKIHGYIERK---KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW 378
Query: 308 NSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMI 367
++I + GR A+ F +L + P+SI FV L+AC+H G++ EGR F +M
Sbjct: 379 TAMISAYGFSGRGCDAVALFSKLQ-DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 368 NEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVL 427
+ Y ITP LEH C+VDLL RAG + EA + +M M+P+ +W +LL AC + H+ +
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGAC-RVHSDTDI 496
Query: 428 SEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEID 487
A ++ + SG YVLLS +YA A RW +V +R +M KG+ K PG S++E++
Sbjct: 497 GLLAADKLFQLAPEQ-SGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
Query: 488 GIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHS 547
I H F GD SHPQ+ +IY LD++ +K+K GY PD S++A+ D ++ K++ L +HS
Sbjct: 556 RIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPD-SESALHDVEEEDKETHLAVHS 614
Query: 548 ERLAIALGILNLK-----PGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHH 602
E+LAI ++N K IR+ KNLR+C DCH KLIS+I + EII+RD RFH
Sbjct: 615 EKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHV 674
Query: 603 FKDGSCSCMDYW 614
F+ G CSC DYW
Sbjct: 675 FRFGVCSCGDYW 686
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 129/268 (48%), Gaps = 11/268 (4%)
Query: 155 KQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQF 214
+ H+ I L + + L+ YAS + A KVFD + ER+++ NVMI ++V
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 215 GEFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDV 273
G + +K+F M PD YTF + AC+ T+ +G H + L + +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK---VGLSSTL 175
Query: 274 LVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVE 333
V N L+ MY KCG L AR V + M +RD+ SWNS+++G+A + R + AL+ R +
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC-REMES 234
Query: 334 ESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNID 393
S ++ T +L A ++ +E Y M + L + ++ + +
Sbjct: 235 VKISHDAGTMASLLPAVSN--TTTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPV 291
Query: 394 EALHLVSNMP---MKPDAVIWRSLLDAC 418
EA+ L S M +PDAV S+L AC
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPAC 319
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 137/297 (46%), Gaps = 22/297 (7%)
Query: 39 SLTECKSMSQLKQIH-AQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIENPN 97
+L C+ M +K H A + + LP T + ++ Y +F+++ +
Sbjct: 225 ALEVCREMESVKISHDAGTMASLLPAVSNT-----------TTENVMYVKDMFFKMGKKS 273
Query: 98 SFTWNTLIRACARSVDAKP-QAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQ 156
+WN +I + +A P +A+ L+ RM E PD + L AC A S GK+
Sbjct: 274 LVSWNVMIGVYMK--NAMPVEAVELYSRM-EADGFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 157 AHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGE 216
H +I ++ L+ ++ + N+LI YA CG L+ A VF+NM R +VSW MI A+ G
Sbjct: 331 IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGR 390
Query: 217 FDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLV 275
A+ LF ++Q PD F + +AC+ L G + DH +T L
Sbjct: 391 GCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM---TDHYKITPRLE 447
Query: 276 NNS-LIDMYCKCGSLDIARQVFESMP-KRDLTSWNSIILGFALHGRAEAALKYFDRL 330
+ + ++D+ + G + A + + M + + W +++ +H + L D+L
Sbjct: 448 HLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/580 (34%), Positives = 324/580 (55%), Gaps = 15/580 (2%)
Query: 36 LLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIEN 95
+L ++ E + + QIH+ A +T L + I ++ + +F +
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF--ISLYSKCGKIKMGSALFREFRK 284
Query: 96 PNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGK 155
P+ +N +I + + + ++ LF+ ++ G L + + ++
Sbjct: 285 PDIVAYNAMIHGYTSNGETE-LSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA--- 340
Query: 156 QAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFG 215
H + K +S ++ +L Y+ ++ A K+FD E+SL SWN MI + Q G
Sbjct: 341 -IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 216 EFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVL 274
+ A+ LFR MQ F P+ T I SACA L LSLG W H ++R D + +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDFE--SSIY 456
Query: 275 VNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEE 334
V+ +LI MY KCGS+ AR++F+ M K++ +WN++I G+ LHG+ + AL F ++
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML-NS 515
Query: 335 SFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDE 394
+P +TF+ VL AC+H G+V EG + F+ MI+ Y P ++HY C+VD+L RAG++
Sbjct: 516 GITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQR 575
Query: 395 ALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVY 454
AL + M ++P + +W +LL AC + H L+ V++++ E + G +VLLS ++
Sbjct: 576 ALQFIEAMSIEPGSSVWETLLGAC-RIHKDTNLARTVSEKLFELDPDNV-GYHVLLSNIH 633
Query: 455 ASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLID 514
++ R + VR+ + + K PG + IEI H F +GD SHPQ K+IY L+ ++
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLE 693
Query: 515 EKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVC 574
K++ GY P+ ++ A+ D ++ ++ +++HSERLAIA G++ +PG IR+ KNLRVC
Sbjct: 694 GKMREAGYQPE-TELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVC 752
Query: 575 KDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
DCH VTKLIS+I I+VRD RFHHFKDG CSC DYW
Sbjct: 753 LDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 175/371 (47%), Gaps = 17/371 (4%)
Query: 50 KQIHAQALRTALPQQHKTLLIYSRIIH-FASFADLDYAFRVFYQIENPNSFTWNTLIRAC 108
+ IH QA+ + LL+ S I+ + F ++ A +VF ++ ++ WNT+I
Sbjct: 139 RVIHGQAVVDGCDSE---LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISG- 194
Query: 109 ARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVS 168
R + ++I +F+ +I + D T L A A L G Q H+ K G S
Sbjct: 195 YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS 254
Query: 169 DVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQ 228
Y+ I Y+ CG + + + +F + +V++N MI + GE + +L LF+ +
Sbjct: 255 HDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Query: 229 ILFEPDGYTFQSIT--SACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKC 286
+ G +S T S L L H Y L+ + ++ V+ +L +Y K
Sbjct: 315 L----SGARLRSSTLVSLVPVSGHLMLIYAIHGYCLK---SNFLSHASVSTALTTVYSKL 367
Query: 287 GSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGV 346
++ AR++F+ P++ L SWN++I G+ +G E A+ F R + + FSPN +T +
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF-REMQKSEFSPNPVTITCI 426
Query: 347 LSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKP 406
LSAC G +S G+ D ++ + + L+ + A+ G+I EA L M K
Sbjct: 427 LSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKK 484
Query: 407 DAVIWRSLLDA 417
+ V W +++
Sbjct: 485 NEVTWNTMISG 495
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 142/311 (45%), Gaps = 11/311 (3%)
Query: 45 SMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIENPNSFTWNTL 104
S+S L Q HAQ + ++ L+ + + YA +F ++ P+ F +N L
Sbjct: 32 SISHLAQTHAQIILHGF--RNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 105 IRACARSVDAKPQA-IVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFK 163
+R SV+ P + + +F + + ++ P+ T+ FA+ A + G+ H
Sbjct: 90 MRGF--SVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVV 147
Query: 164 RGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKL 223
G S++ + ++++ Y ++ A KVFD M E+ + WN MI + + + ++++
Sbjct: 148 DGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQV 207
Query: 224 FRRM--QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLID 281
FR + + D T I A A L L LGM H+ + +S V I
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS---HDYVLTGFIS 264
Query: 282 MYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSI 341
+Y KCG + + +F K D+ ++N++I G+ +G E +L F L++ + S
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA-RLRSS 323
Query: 342 TFVGVLSACNH 352
T V ++ H
Sbjct: 324 TLVSLVPVSGH 334
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/585 (36%), Positives = 329/585 (56%), Gaps = 18/585 (3%)
Query: 35 SLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIH-FASFADLDYAFRVFYQI 93
SLLS+ TE ++ IH+ +++ L + L + +++I +A F L +VF ++
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESE---LFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 94 ENPNSFTWNTLIRACARSVDAKP-QAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFS 152
+ +WN++I+A ++ +P +AI LFQ M + PD T + L
Sbjct: 309 YVRDLISWNSIIKA--YELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIR 365
Query: 153 QGKQAHAHIFKRG-LVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAF 211
+ ++G + D+ I N+++ YA G +D A VF+ + ++SWN +I +
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 212 VQFGEFDSALKLFRRMQILFE--PDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSL 269
Q G A++++ M+ E + T+ S+ AC+ L GM H +L++ L
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN---GL 482
Query: 270 VTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDR 329
DV V SL DMY KCG L+ A +F +P+ + WN++I HG E A+ F
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 542
Query: 330 LVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARA 389
++ +E P+ ITFV +LSAC+H G+V EG+ F++M +Y ITP L+HYGC+VD+ RA
Sbjct: 543 ML-DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 390 GNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVL 449
G ++ AL + +M ++PDA IW +LL AC + H +V L + ++ + E E G +VL
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSAC-RVHGNVDLGKIASEHLFEVEPEHV-GYHVL 659
Query: 450 LSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGF 509
LS +YASA +W V +R + KG+ K PG SS+E+D F+ G+ +HP +++Y
Sbjct: 660 LSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE 719
Query: 510 LDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFK 569
L + KLK GY PD+ + + D DD K+ L HSERLAIA ++ IR+FK
Sbjct: 720 LTALQAKLKMIGYVPDH-RFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFK 778
Query: 570 NLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
NLRVC DCH VTK IS+I EIIVRD RFHHFK+G CSC DYW
Sbjct: 779 NLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 208/424 (49%), Gaps = 40/424 (9%)
Query: 32 NHSSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIH-FASFADLDYAFRVF 90
++ + S L C+++ +IH AL+ + + + +IH ++ + + A +F
Sbjct: 152 DYRTFPSVLKACRTVIDGNKIHCLALKFGFMWD---VYVAASLIHLYSRYKAVGNARILF 208
Query: 91 YQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFA 150
++ + +WN +I +S +AK +A+ L G D T L AC
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAK-EALTL-----SNGLRAMDSVTVVSLLSACTEAGD 262
Query: 151 FSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDA 210
F++G H++ K GL S+++++N LI YA G L KVFD M R L+SWN +I A
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 211 FVQFGEFDSALKLFRRMQI-LFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSL 269
+ + A+ LF+ M++ +PD T S+ S + L + + LR
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR--KGWF 380
Query: 270 VTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDR 329
+ D+ + N+++ MY K G +D AR VF +P D+ SWN+II G+A +G A A++ ++
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 330 LVVEESFSPNSITFVGVLSACNHRGMVSEGRD----------YFDVMINEYNITPVLEHY 379
+ E + N T+V VL AC+ G + +G Y DV + +T + + Y
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV----VTSLADMY 496
Query: 380 GCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHA----SVVLSEEVAKQV 435
G + G +++AL L +P + ++V W +L+ AC H +V+L +E+ +
Sbjct: 497 G-------KCGRLEDALSLFYQIP-RVNSVPWNTLI-ACHGFHGHGEKAVMLFKEMLDEG 547
Query: 436 IESE 439
++ +
Sbjct: 548 VKPD 551
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 193/411 (46%), Gaps = 24/411 (5%)
Query: 43 CKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIH-FASFADLDYAFRVFYQIENPNSFTW 101
C ++ K +HA R + +Q + + I +++++ + ++ A F I+N + + W
Sbjct: 64 CTNLQSAKCLHA---RLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAW 120
Query: 102 NTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHI 161
N +I R+ ++ + I F + + PD TFP LKAC + G + H
Sbjct: 121 NLMISGYGRAGNSS-EVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLA 176
Query: 162 FKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSAL 221
K G + DVY+ SLIH Y+ + A +FD M R + SWN MI + Q G AL
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 222 KLFRRMQILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLID 281
L ++ + D T S+ SAC + G+ H+Y ++ H L +++ V+N LID
Sbjct: 237 TLSNGLRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIK---HGLESELFVSNKLID 290
Query: 282 MYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSI 341
+Y + G L ++VF+ M RDL SWNSII + L+ + A+ F + + P+ +
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR-IQPDCL 349
Query: 342 TFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSN 401
T + + S + G + R + + + +V + A+ G +D A + +
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 402 MPMKPDAVIWRSLLDACCKKHASVVLSEEVAK--QVIESEGGICS--GVYV 448
+P D + W +++ +A + E + ++E EG I + G +V
Sbjct: 410 LP-NTDVISWNTIISG----YAQNGFASEAIEMYNIMEEEGEIAANQGTWV 455
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 23/277 (8%)
Query: 147 YLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNV 206
Y K HA + + +V I+ L++ Y G++ LA FD++ R + +WN+
Sbjct: 63 YCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNL 122
Query: 207 MIDAFVQFGEFDSALKLFRRMQIL--FEPDGYTFQSITSACAGLATLSLGMWAHAYILRH 264
MI + + G ++ F + PD TF S+ AC T+ G H L+
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALK- 178
Query: 265 CDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAAL 324
+ DV V SLI +Y + ++ AR +F+ MP RD+ SWN++I G+ G A+ AL
Sbjct: 179 --FGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 325 KYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEH----YG 380
+ L + +S+T V +LSAC G + G V I+ Y+I LE
Sbjct: 237 TLSNGLR-----AMDSVTVVSLLSACTEAGDFNRG-----VTIHSYSIKHGLESELFVSN 286
Query: 381 CLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDA 417
L+DL A G + + + M ++ D + W S++ A
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKA 322
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/566 (38%), Positives = 317/566 (56%), Gaps = 20/566 (3%)
Query: 55 QALRTALPQQHKTLLIYSRIIH-FASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVD 113
QA R K ++ ++H + F +D A ++F Q+ N +W T+I C +
Sbjct: 146 QAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMI--CGLDQN 203
Query: 114 AKP-QAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYI 172
+ +A+ LF+ M+ + + F + ACA AF G Q H I K G + + Y+
Sbjct: 204 ERSGEALDLFKNML-RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYV 262
Query: 173 NNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRM---QI 229
+ SLI FYA+C + + KVFD + + W ++ + + + AL +F M I
Sbjct: 263 SASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSI 322
Query: 230 LFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSL 289
L P+ TF S ++C+ L TL G H ++ L TD V NSL+ MY G++
Sbjct: 323 L--PNQSTFASGLNSCSALGTLDWGKEMHGVAVKL---GLETDAFVGNSLVVMYSDSGNV 377
Query: 290 DIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSA 349
+ A VF + K+ + SWNSII+G A HGR + A F +++ + P+ ITF G+LSA
Sbjct: 378 NDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMI-RLNKEPDEITFTGLLSA 436
Query: 350 CNHRGMVSEGRDYFDVMINEYN-ITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDA 408
C+H G + +GR F M + N I ++HY C+VD+L R G + EA L+ M +KP+
Sbjct: 437 CSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNE 496
Query: 409 VIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRK 468
++W +LL AC + H+ V E+ A + + S YVLLS +YASA RW++V +R
Sbjct: 497 MVWLALLSAC-RMHSDVDRGEKAAAAIFNLDSK-SSAAYVLLSNIYASAGRWSNVSKLRV 554
Query: 469 LMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQ 528
M G+ K+PG S + I G HEFF+GD P +IY L+ + EKLK GY PDY +
Sbjct: 555 KMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDY-R 611
Query: 529 AAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIF 588
+A+ D D+ K+ L HSERLAIA G++N G + V KNLRVC+DCH V KLIS +
Sbjct: 612 SALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVV 671
Query: 589 NVEIIVRDRARFHHFKDGSCSCMDYW 614
EI++RD RFHHFK+G+CSC DYW
Sbjct: 672 GREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 133/324 (41%), Gaps = 69/324 (21%)
Query: 160 HIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVS---------------- 203
++F V DV NS+I CG ++ A K+FD M ERS+VS
Sbjct: 87 NLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQ 146
Query: 204 ---------------WNVMIDAFVQFGEFDSALKLFRRM--------------------- 227
WN M+ ++QFG+ D ALKLF++M
Sbjct: 147 AERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERS 206
Query: 228 -----------QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVN 276
+ + F + +ACA +G+ H I++ + + V+
Sbjct: 207 GEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIK---LGFLYEEYVS 263
Query: 277 NSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESF 336
SLI Y C + +R+VF+ + W +++ G++L+ + E AL F + + S
Sbjct: 264 ASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGM-LRNSI 322
Query: 337 SPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEAL 396
PN TF L++C+ G + G++ V + T LV + + +GN+++A+
Sbjct: 323 LPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG-NSLVVMYSDSGNVNDAV 381
Query: 397 HLVSNMPMKPDAVIWRSLLDACCK 420
+ + K V W S++ C +
Sbjct: 382 SVFIKI-FKKSIVSWNSIIVGCAQ 404
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 272 DVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLV 331
+VL+ N L+ +D AR+VF +P ++ + +I G+ R AL FD +
Sbjct: 39 EVLICNHLLSR-----RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMP 93
Query: 332 VEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGN 391
V + S NS+ +S C G ++ FD M ++ GC R+G
Sbjct: 94 VRDVVSWNSM-----ISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCF-----RSGK 143
Query: 392 IDEALHLVSNMPMKPDAVIWRSLL 415
+D+A L MP+K D W S++
Sbjct: 144 VDQAERLFYQMPVK-DTAAWNSMV 166
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 279 LIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSP 338
+I Y + L A +F+ MP RD+ SWNS+I G G A+K FD E
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFD-----EMPER 126
Query: 339 NSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEH--YGCLVDLLARAGNIDEAL 396
+ +++ +++ C G V + F M PV + + +V + G +D+AL
Sbjct: 127 SVVSWTAMVNGCFRSGKVDQAERLFYQM-------PVKDTAAWNSMVHGYLQFGKVDDAL 179
Query: 397 HLVSNMPMKPDAVIWRSLL 415
L MP K + + W +++
Sbjct: 180 KLFKQMPGK-NVISWTTMI 197
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/587 (35%), Positives = 325/587 (55%), Gaps = 33/587 (5%)
Query: 38 SSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFR--------V 89
SSL E S+S KQ+H A++ I + F S A +D R +
Sbjct: 427 SSLPEGLSLS--KQVHVHAIK-----------INNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 90 FYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLF 149
++ N + WN ++ +S D + + LF M +QG D T K C +LF
Sbjct: 474 LFERHNFDLVAWNAMMAGYTQSHDGH-KTLKLFALMHKQGE-RSDDFTLATVFKTCGFLF 531
Query: 150 AFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMID 209
A +QGKQ HA+ K G D+++++ ++ Y CG + A FD++ V+W MI
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 210 AFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILR-HCDH 267
++ GE + A +F +M+++ PD +T ++ A + L L G HA L+ +C
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC-- 649
Query: 268 SLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYF 327
D V SL+DMY KCGS+D A +F+ + ++T+WN++++G A HG + L+ F
Sbjct: 650 --TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLF 707
Query: 328 DRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLA 387
++ P+ +TF+GVLSAC+H G+VSE + M +Y I P +EHY CL D L
Sbjct: 708 KQMK-SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALG 766
Query: 388 RAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVY 447
RAG + +A +L+ +M M+ A ++R+LL A C+ + VA +++E E + S Y
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLL-AACRVQGDTETGKRVATKLLELEP-LDSSAY 824
Query: 448 VLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIY 507
VLLS +YA+A +W+++ L R +M V K+PG S IE+ H F D S+ QT+ IY
Sbjct: 825 VLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIY 884
Query: 508 GFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRV 567
+ + +K GY P+ + +VD ++ K+ +L HSE+LA+A G+L+ P PIRV
Sbjct: 885 RKVKDMIRDIKQEGYVPE-TDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRV 943
Query: 568 FKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
KNLRVC DCH K I++++N EI++RD RFH FKDG CSC DYW
Sbjct: 944 IKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 14/301 (4%)
Query: 122 FQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYA 181
F M+E +V D+ TF L + + + G+Q H K GL + ++NSLI+ Y
Sbjct: 303 FADMVES-DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC 361
Query: 182 SCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL---FEPDGYTF 238
A VFDNM ER L+SWN +I Q G A+ LF MQ+L +PD YT
Sbjct: 362 KLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF--MQLLRCGLKPDQYTM 419
Query: 239 QSITSACAGLAT-LSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFE 297
S+ A + L LSL H + ++ + V+D V+ +LID Y + + A +FE
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINN---VSDSFVSTALIDAYSRNRCMKEAEILFE 476
Query: 298 SMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVS 357
DL +WN+++ G+ LK F L+ ++ + T V C ++
Sbjct: 477 R-HNFDLVAWNAMMAGYTQSHDGHKTLKLF-ALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 358 EGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDA 417
+G+ I + G L D+ + G++ A ++P+ PD V W +++
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGIL-DMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISG 592
Query: 418 C 418
C
Sbjct: 593 C 593
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 154 GKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQ 213
GK HA I + ++ N+LI Y+ CG L A +VFD M +R LVSWN ++ A+ Q
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 214 FGE-----FDSALKLFRRMQILFEPDGYTFQSITSACAGLATLSLGMWA----HAYILRH 264
E A LFR IL + YT + S L S +WA H Y
Sbjct: 118 SSECVVENIQQAFLLFR---ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA--- 171
Query: 265 CDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAAL 324
C L D V +L+++Y K G + + +FE MP RD+ WN ++ + G E A+
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 325 KYFDRLVVEESFSPNSITF 343
+PN IT
Sbjct: 232 D-LSSAFHSSGLNPNEITL 249
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 24/192 (12%)
Query: 235 GYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQ 294
G+ +ITS+ L LG HA IL ++ L+NN LI MY KCGSL AR+
Sbjct: 44 GFLRNAITSS-----DLMLGKCTHARILTFEENP--ERFLINN-LISMYSKCGSLTYARR 95
Query: 295 VFESMPKRDLTSWNSIILGFALHGRA-----EAALKYFDRLVVEESFSPNSITFVGVLSA 349
VF+ MP RDL SWNSI+ +A + A F R++ ++ + +T +L
Sbjct: 96 VFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKL 154
Query: 350 CNHRGMVSEGRDYFDVMINEYNITPVLEH----YGCLVDLLARAGNIDEALHLVSNMPMK 405
C H G V + + Y L+ G LV++ + G + E L MP +
Sbjct: 155 CLHSGYVWASESF-----HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR 209
Query: 406 PDAVIWRSLLDA 417
D V+W +L A
Sbjct: 210 -DVVLWNLMLKA 220
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 50 KQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIENPNSFTWNTLIRACA 109
K HA+ L + + LI + I ++ L YA RVF ++ + + +WN+++ A A
Sbjct: 59 KCTHARIL--TFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 110 RS----VDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRG 165
+S V+ QA +LF R++ Q V + T LK C + + H + K G
Sbjct: 117 QSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 166 LVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKL 223
L D ++ +L++ Y G + +F+ M R +V WN+M+ A+++ G + A+ L
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/597 (34%), Positives = 332/597 (55%), Gaps = 11/597 (1%)
Query: 20 IFNNNRNEGSFNNHSSLLSSLTECKSMSQLK-QIHAQALRTALPQQHKTLLIYSRIIHFA 78
+F + R G + + + L C S K I +L H + S + ++
Sbjct: 98 LFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYS 157
Query: 79 SFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTF 138
L+ A ++F +I + + TW L S + +AI LF++M+E G V PD +
Sbjct: 158 GSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR-EAIDLFKKMVEMG-VKPDSYFI 215
Query: 139 PFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLE 198
L AC ++ G+ ++ + + + ++ +L++ YA CG ++ A VFD+M+E
Sbjct: 216 VQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVE 275
Query: 199 RSLVSWNVMIDAFVQFGEFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSLGMWA 257
+ +V+W+ MI + ++LF +M Q +PD ++ S+CA L L LG W
Sbjct: 276 KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWG 335
Query: 258 HAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALH 317
+ I RH +T++ + N+LIDMY KCG++ +VF+ M ++D+ N+ I G A +
Sbjct: 336 ISLIDRH---EFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKN 392
Query: 318 GRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLE 377
G + + F + + SP+ TF+G+L C H G++ +G +F+ + Y + +E
Sbjct: 393 GHVKLSFAVFGQ-TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVE 451
Query: 378 HYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIE 437
HYGC+VDL RAG +D+A L+ +MPM+P+A++W +LL C + L+E V K++I
Sbjct: 452 HYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC-RLVKDTQLAETVLKELIA 510
Query: 438 SEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGD 497
E +G YV LS +Y+ RW++ VR +M KG+ K PG S IE++G HEF A D
Sbjct: 511 LEPW-NAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADD 569
Query: 498 TSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGIL 557
SHP + +IY L+ + +++ G+ P ++ D ++ K+ L HSE+LA+ALG++
Sbjct: 570 KSHPLSDKIYAKLEDLGNEMRLMGFVPT-TEFVFFDVEEEEKERVLGYHSEKLAVALGLI 628
Query: 558 NLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
+ G IRV KNLRVC DCHEV KLIS+I EI+VRD RFH F +GSCSC DYW
Sbjct: 629 STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 185/377 (49%), Gaps = 11/377 (2%)
Query: 45 SMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIENPNSFTWNTL 104
+++ LKQIH + L H T L+ + F Y++ +F + PN F +N+L
Sbjct: 25 TVNHLKQIHVSLINHHL--HHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSL 82
Query: 105 IRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKR 164
I + + + LF + + G L TFP LKAC + G H+ + K
Sbjct: 83 INGFVNN-HLFHETLDLFLSIRKHGLYL-HGFTFPLVLKACTRASSRKLGIDLHSLVVKC 140
Query: 165 GLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLF 224
G DV SL+ Y+ G L+ A+K+FD + +RS+V+W + + G A+ LF
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 225 RRM-QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMY 283
++M ++ +PD Y + SAC + L G W Y+ + + + V +L+++Y
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME---EMEMQKNSFVRTTLVNLY 257
Query: 284 CKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITF 343
KCG ++ AR VF+SM ++D+ +W+++I G+A + + ++ F ++ ++E+ P+ +
Sbjct: 258 AKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM-LQENLKPDQFSI 316
Query: 344 VGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMP 403
VG LS+C G + G ++ +I+ + L L+D+ A+ G + + M
Sbjct: 317 VGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK 375
Query: 404 MKPDAVIWRSLLDACCK 420
K D VI + + K
Sbjct: 376 EK-DIVIMNAAISGLAK 391
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/577 (36%), Positives = 320/577 (55%), Gaps = 33/577 (5%)
Query: 50 KQIHAQALRTAL---PQQHKTLL-IYSRIIHFASFADLDYAFRVFYQIENPNSFTWNTLI 105
K +H Q L+T P+ LL +Y+++ D+ AF+VF ++ + W+ +I
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQL------GDMSDAFKVFNEMPKNDVVPWSFMI 320
Query: 106 -RACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKR 164
R C +A+ LF RM E V+P++ T L CA G+Q H + K
Sbjct: 321 ARFCQNGF--CNEAVDLFIRMRE-AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV 377
Query: 165 GLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLF 224
G D+Y++N+LI YA C +D A K+F + ++ VSWN +I + GE A +F
Sbjct: 378 GFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMF 437
Query: 225 R---RMQILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLID 281
R R Q+ TF S ACA LA++ LG+ H ++ + V V+NSLID
Sbjct: 438 REALRNQVSVTE--VTFSSALGACASLASMDLGVQVHGLAIKTNN---AKKVAVSNSLID 492
Query: 282 MYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSI 341
MY KCG + A+ VF M D+ SWN++I G++ HG AL+ D ++ + PN +
Sbjct: 493 MYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILD-IMKDRDCKPNGL 551
Query: 342 TFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSN 401
TF+GVLS C++ G++ +G++ F+ MI ++ I P LEHY C+V LL R+G +D+A+ L+
Sbjct: 552 TFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEG 611
Query: 402 MPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGIC---SGVYVLLSRVYASAR 458
+P +P +IWR++L A ++ +EE A++ E I YVL+S +YA A+
Sbjct: 612 IPYEPSVMIWRAMLSASMNQN-----NEEFARRSAEEILKINPKDEATYVLVSNMYAGAK 666
Query: 459 RWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLK 518
+W +V +RK M + GV KEPG S IE G H F G + HP K I G L+ ++ K
Sbjct: 667 QWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKAT 726
Query: 519 SRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMP-IRVFKNLRVCKDC 577
GY PD A ++D D+ K L +HSERLA+A G++ + I + KNLR+C DC
Sbjct: 727 RAGYVPD-RNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDC 785
Query: 578 HEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
H K+IS I ++++RD RFHHF G CSC D+W
Sbjct: 786 HSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 132/287 (45%), Gaps = 7/287 (2%)
Query: 132 LPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANK 191
+P+ +TF ALKA L AF K H I K V D + L+ Y G + A K
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFK 303
Query: 192 VFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILF-EPDGYTFQSITSACAGLAT 250
VF+ M + +V W+ MI F Q G + A+ LF RM+ F P+ +T SI + CA
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 251 LSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSI 310
LG H +++ D+ V+N+LID+Y KC +D A ++F + ++ SWN++
Sbjct: 364 SGLGEQLHGLVVK---VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420
Query: 311 ILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEY 370
I+G+ G A F R + S +TF L AC + G + I
Sbjct: 421 IVGYENLGEGGKAFSMF-REALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN 479
Query: 371 NITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDA 417
N V L+D+ A+ G+I A + + M D W +L+
Sbjct: 480 NAKKVAVS-NSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISG 524
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 171/369 (46%), Gaps = 18/369 (4%)
Query: 52 IHAQALRTALPQQHKTLLIYSRIIHFASFADLDY---AFRVFYQIENPNSFTWNTLIRAC 108
I A+A+ + ++ L +++ I ++ + A +F ++ N+ ++ TL +
Sbjct: 66 ISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY 125
Query: 109 ARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVS 168
A I L+ R+ +G+ L + H F LK L H+ I K G S
Sbjct: 126 ACQ-----DPIGLYSRLHREGHEL-NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDS 179
Query: 169 DVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQ 228
+ ++ +LI+ Y+ CG +D A VF+ +L + +V W ++ +V+ G F+ +LKL M+
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 229 IL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCG 287
+ F P+ YTF + A GL H IL+ C V D V L+ +Y + G
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC---YVLDPRVGVGLLQLYTQLG 296
Query: 288 SLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESF-SPNSITFVGV 346
+ A +VF MPK D+ W+ +I F +G A+ F R+ E+F PN T +
Sbjct: 297 DMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM--REAFVVPNEFTLSSI 354
Query: 347 LSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKP 406
L+ C G S + ++ + + L+D+ A+ +D A+ L + + K
Sbjct: 355 LNGC-AIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK- 412
Query: 407 DAVIWRSLL 415
+ V W +++
Sbjct: 413 NEVSWNTVI 421
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 132/318 (41%), Gaps = 17/318 (5%)
Query: 105 IRACARSVDAKPQAIVLFQRMIEQGNVLP--DKHTFPFALKACAYLFAFSQGKQAHAHIF 162
IR C SV K A+ L +++P D H + L+ C K H I
Sbjct: 23 IRQCGFSV--KTAALDLES----SDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDIL 76
Query: 163 KRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALK 222
K+G D++ N L++ Y G A +FD M ER+ VS+ + + +
Sbjct: 77 KKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSR 136
Query: 223 LFRRMQILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDM 282
L R E + + F S L + W H+ I++ ++ V +LI+
Sbjct: 137 LHREGH---ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVK---LGYDSNAFVGAALINA 190
Query: 283 YCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSIT 342
Y CGS+D AR VFE + +D+ W I+ + +G E +LK + + F PN+ T
Sbjct: 191 YSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRM-AGFMPNNYT 249
Query: 343 FVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNM 402
F L A G + ++ + G L+ L + G++ +A + + M
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG-LLQLYTQLGDMSDAFKVFNEM 308
Query: 403 PMKPDAVIWRSLLDACCK 420
P K D V W ++ C+
Sbjct: 309 P-KNDVVPWSFMIARFCQ 325
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/586 (36%), Positives = 328/586 (55%), Gaps = 28/586 (4%)
Query: 40 LTECKSMSQLKQ---IHAQALRTALPQ----QHKTLLIYSRIIHFASFADLDYAFRVFYQ 92
L C +S L+ +HAQ R Q+ + +Y++ S A VF
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS------ARTVFEG 179
Query: 93 IENPNS--FTWNTLIRACARSVDAKP-QAIVLFQRMIEQGNVLPDKHTFPFALKACAYLF 149
+ P +W ++ A A+ + +P +A+ +F +M + +V PD L A L
Sbjct: 180 LPLPERTIVSWTAIVSAYAQ--NGEPMEALEIFSQM-RKMDVKPDWVALVSVLNAFTCLQ 236
Query: 150 AFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMID 209
QG+ HA + K GL + + SL YA CG + A +FD M +L+ WN MI
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 296
Query: 210 AFVQFGEFDSALKLFRRM-QILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHS 268
+ + G A+ +F M PD + S SACA + +L + Y+ R D+
Sbjct: 297 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR-SDYR 355
Query: 269 LVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFD 328
DV ++++LIDM+ KCGS++ AR VF+ RD+ W+++I+G+ LHGRA A+ +
Sbjct: 356 --DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY- 412
Query: 329 RLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLAR 388
R + PN +TF+G+L ACNH GMV EG +F+ M ++ I P +HY C++DLL R
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGR 471
Query: 389 AGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYV 448
AG++D+A ++ MP++P +W +LL AC KKH V L E A+Q+ + +G YV
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSAC-KKHRHVELGEYAAQQLFSIDPS-NTGHYV 529
Query: 449 LLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYG 508
LS +YA+AR W+ V VR M +KG+ K+ GCS +E+ G F GD SHP+ ++I
Sbjct: 530 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIER 589
Query: 509 FLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGMPIRVF 568
++ I+ +LK G+ + A++ D D+ + +L HSER+AIA G+++ G P+R+
Sbjct: 590 QVEWIESRLKEGGFVAN-KDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRIT 648
Query: 569 KNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
KNLR C +CH TKLIS++ + EI+VRD RFHHFKDG CSC DYW
Sbjct: 649 KNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 205/387 (52%), Gaps = 18/387 (4%)
Query: 33 HSSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQ 92
++SL+ S T +QLKQIHA+ L L Q LI I +SF D+ +A +VF
Sbjct: 24 YASLIDSATH---KAQLKQIHARLLVLGL--QFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 93 IENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAFS 152
+ P F WN +IR +R+ + A++++ M + V PD TFP LKAC+ L
Sbjct: 79 LPRPQIFPWNAIIRGYSRN-NHFQDALLMYSNM-QLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 153 QGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDN--MLERSLVSWNVMIDA 210
G+ HA +F+ G +DV++ N LI YA C L A VF+ + ER++VSW ++ A
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 211 FVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSL 269
+ Q GE AL++F +M+ + +PD S+ +A L L G HA +++ +
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK-MGLEI 255
Query: 270 VTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDR 329
D+L+ SL MY KCG + A+ +F+ M +L WN++I G+A +G A A+ F
Sbjct: 256 EPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 330 LVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFD-VMINEYNITPVLEHYGCLVDLLAR 388
+ + + P++I+ +SAC G + + R ++ V ++Y + L+D+ A+
Sbjct: 314 M-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAK 370
Query: 389 AGNIDEALHLVSNMPMKPDAVIWRSLL 415
G++ E LV + + D V+W +++
Sbjct: 371 CGSV-EGARLVFDRTLDRDVVVWSAMI 396
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/549 (37%), Positives = 312/549 (56%), Gaps = 15/549 (2%)
Query: 74 IIHFASFADLDYAFRVFYQI-ENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVL 132
+ +++ L A VFY + E + +WN++I A + + +A+ L++ MI +G +
Sbjct: 180 VTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEG-AKALALYKEMIFKGFKI 238
Query: 133 PDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDL---A 189
D T L A L G+Q H + K G + ++ + LI FY+ CG D +
Sbjct: 239 -DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDS 297
Query: 190 NKVFDNMLERSLVSWNVMIDAFVQFGEF-DSALKLFRRMQ-ILFEPDGYTFQSITSACAG 247
KVF +L LV WN MI + E + A+K FR+MQ I PD +F +TSAC+
Sbjct: 298 EKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Query: 248 LATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSW 307
L++ S H ++ H + VNN+LI +Y K G+L AR VF+ MP+ + S+
Sbjct: 358 LSSPSQCKQIHGLAIK--SHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 308 NSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMI 367
N +I G+A HG AL + R++ + +PN ITFV VLSAC H G V EG++YF+ M
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRML-DSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 368 NEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVL 427
+ I P EHY C++DLL RAG ++EA + MP KP +V W +LL A C+KH ++ L
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA-CRKHKNMAL 533
Query: 428 SEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEID 487
+E A +++ + + + YV+L+ +YA AR+W ++ VRK M K + K+PGCS IE+
Sbjct: 534 AERAANELMVMQ-PLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVK 592
Query: 488 GIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRL-- 545
H F A D SHP +++ +L+ + +K+K GY D A + ++ +RL
Sbjct: 593 KKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGH 652
Query: 546 HSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKD 605
HSE+LA+A G+++ + G + V KNLR+C DCH K +S + EIIVRD RFH FKD
Sbjct: 653 HSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKD 712
Query: 606 GSCSCMDYW 614
G CSC DYW
Sbjct: 713 GKCSCGDYW 721
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 180/404 (44%), Gaps = 46/404 (11%)
Query: 36 LLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFYQIEN 95
LL S+ E + + K +HA +++ + T L + ++ L YA FY E
Sbjct: 15 LLKSVAE-RDLFTGKSLHALYVKSIVASS--TYLSNHFVNLYSKCGRLSYARAAFYSTEE 71
Query: 96 PNSFTWNTLIRACARS---------VDAKPQ---------------------AIVLFQRM 125
PN F++N +++A A+ D PQ A+VLF+RM
Sbjct: 72 PNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM 131
Query: 126 IEQGNVLPDKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGH 185
+ G + D T + AC KQ H G S +NN+ + +Y+ G
Sbjct: 132 RKLGFEV-DGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 186 LDLANKVFDNMLE-RSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITS 243
L A VF M E R VSWN MI A+ Q E AL L++ M F+ D +T S+ +
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 244 ACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLD---IARQVFESMP 300
A L L G H +++ H + V + LID Y KCG D + +VF+ +
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQ---NSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 301 KRDLTSWNSIILGFALHGR-AEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEG 359
DL WN++I G++++ +E A+K F R + P+ +FV V SAC++ S+
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSF-RQMQRIGHRPDDCSFVCVTSACSNLSSPSQC 364
Query: 360 RDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMP 403
+ + I + + + L+ L ++GN+ +A + MP
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 51/321 (15%)
Query: 154 GKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLD-------------------------- 187
GK HA K + S Y++N ++ Y+ CG L
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 188 -----LANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSI 241
+A ++FD + + VS+N +I + E +A+ LF+RM+ L FE DG+T +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 242 TSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPK 301
+AC L + H + + S + VNN+ + Y K G L A VF M +
Sbjct: 147 IAACCDRVDLIKQL--HCFSVSGGFDSYSS---VNNAFVTYYSKGGLLREAVSVFYGMDE 201
Query: 302 -RDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGR 360
RD SWNS+I+ + H AL + ++ + F + T VL+A + GR
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIF-KGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 361 DYFDVMINEYNITPVLEHYGC-LVDLLARAGNIDEAL--HLVSNMPMKPDAVIWRSLLDA 417
+ +I H G L+D ++ G D V + PD V+W +++
Sbjct: 261 QFHGKLIKAGFHQN--SHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI-- 316
Query: 418 CCKKHASVVLSEEVAKQVIES 438
+ ++EE++++ ++S
Sbjct: 317 -----SGYSMNEELSEEAVKS 332
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/570 (35%), Positives = 323/570 (56%), Gaps = 19/570 (3%)
Query: 50 KQIHAQALRTALPQQHKTLLIYSRIIHFASFADLDYAFRVFY-QIENPNSFTWNTLIRAC 108
+Q+HA ++ T + + ++I+ F S D R+ + ++ + ++N +I +
Sbjct: 270 QQLHALSVTTGFSRDAS---VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 109 ARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFA--LKACAYLFAFSQGKQAHAHIFKRGL 166
+++ D ++ F+ M G D+ FPFA L A L + G+Q H
Sbjct: 327 SQA-DQYEASLHFFREMQCMGF---DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA 382
Query: 167 VSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRR 226
S +++ NSL+ YA C + A +F ++ +R+ VSW +I +VQ G + LKLF +
Sbjct: 383 DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTK 442
Query: 227 MQ-ILFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCK 285
M+ D TF ++ A A A+L LG HA+I+R + + +V + L+DMY K
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGN---LENVFSGSGLVDMYAK 499
Query: 286 CGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVG 345
CGS+ A QVFE MP R+ SWN++I A +G EAA+ F +++ E P+S++ +G
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI-ESGLQPDSVSILG 558
Query: 346 VLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMK 405
VL+AC+H G V +G +YF M Y ITP +HY C++DLL R G EA L+ MP +
Sbjct: 559 VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 618
Query: 406 PDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGICSGVYVLLSRVYASARRWNDVGL 465
PD ++W S+L+AC + H + L+E A+++ E + YV +S +YA+A W V
Sbjct: 619 PDEIMWSSVLNAC-RIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRD 677
Query: 466 VRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQTKQIYGFLDLIDEKLKSRGYTPD 525
V+K M ++G+ K P S +E++ H F + D +HP +I ++ + +++ GY PD
Sbjct: 678 VKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPD 737
Query: 526 YSQAAMVDELDDG-KQSSLRLHSERLAIALGILNLKPGMPIRVFKNLRVCKDCHEVTKLI 584
S ++V ++D+ K SL+ HSERLA+A +++ G PI V KNLR C+DCH KLI
Sbjct: 738 TS--SVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLI 795
Query: 585 SRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
S+I EI VRD +RFHHF +G CSC DYW
Sbjct: 796 SKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 188/387 (48%), Gaps = 13/387 (3%)
Query: 34 SSLLSSLTECKSMSQLKQIHAQALRTALPQQHKTLLIYSRII--HFASFADLDYAFRVFY 91
++LL + + + Q+HA A++ L S ++ + LD A +F
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN--PFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 92 QIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAYLFAF 151
+I +S T+NTLI + ++I LF +M + G+ P TF LKA L F
Sbjct: 209 EIPEKDSVTFNTLITGYEKD-GLYTESIHLFLKMRQSGH-QPSDFTFSGVLKAVVGLHDF 266
Query: 152 SQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAF 211
+ G+Q HA G D + N ++ FY+ + +FD M E VS+NV+I ++
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 212 VQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLV 270
Q +++++L FR MQ + F+ + F ++ S A L++L +G H L S++
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 271 TDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRL 330
V NSL+DMY KC + A +F+S+P+R SW ++I G+ G A LK F ++
Sbjct: 387 H---VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Query: 331 VVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAG 390
+ + TF VL A + G+ +I N+ V G LVD+ A+ G
Sbjct: 444 -RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCG 501
Query: 391 NIDEALHLVSNMPMKPDAVIWRSLLDA 417
+I +A+ + MP + +AV W +L+ A
Sbjct: 502 SIKDAVQVFEEMPDR-NAVSWNALISA 527
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 173 NNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRM---QI 229
N++I + G + A +FD M +R++V+W +++ + + FD A KLFR+M
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 230 LFEPDGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSL 289
PD TF ++ C + HA+ ++ + V+N L+ YC+ L
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK-LGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 290 DIARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSA 349
D+A +FE +P++D ++N++I G+ G ++ F ++ + P+ TF GVL A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM-RQSGHQPSDFTFSGVLKA 259
Score = 39.7 bits (91), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 15/121 (12%)
Query: 303 DLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDY 362
D N I+ G+ AA K +D + + + S N++ +S G VS RD
Sbjct: 47 DTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTM-----ISGHVKTGDVSSARDL 101
Query: 363 FDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMK-----PDAVIWRSLLDA 417
FD M + +T + L+ AR + DEA L M PD V + +LL
Sbjct: 102 FDAMPDRTVVT-----WTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPG 156
Query: 418 C 418
C
Sbjct: 157 C 157
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/535 (39%), Positives = 304/535 (56%), Gaps = 20/535 (3%)
Query: 83 LDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFAL 142
+D A +F ++ + TW T++ ++ + A +F +V+P+K +
Sbjct: 188 VDEAREIFDEMSERSVITWTTMVTGYGQN-NRVDDARKIF-------DVMPEKTEVSWTS 239
Query: 143 KACAYLFAFSQGKQAHAH-IFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSL 201
Y+ G+ A +F+ V V N++I G + A +VFD+M ER+
Sbjct: 240 MLMGYV---QNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 202 VSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLSLGMWAHAY 260
SW +I + G AL LF MQ P T SI S CA LA+L G HA
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 261 ILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRA 320
++R C + DV V + L+ MY KCG L ++ +F+ P +D+ WNSII G+A HG
Sbjct: 357 LVR-CQFDV--DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413
Query: 321 EAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYG 380
E ALK F + + S PN +TFV LSAC++ GMV EG ++ M + + + P+ HY
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 381 CLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEG 440
C+VD+L RAG +EA+ ++ +M ++PDA +W SLL A C+ H+ + ++E AK++IE E
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA-CRTHSQLDVAEFCAKKLIEIEP 532
Query: 441 GICSGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGD-TS 499
SG Y+LLS +YAS RW DV +RKLM + V K PGCS E++ H F G S
Sbjct: 533 E-NSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINS 591
Query: 500 HPQTKQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNL 559
HP+ + I LD +D L+ GY PD S A+ D ++ K +SL+ HSERLA+A +L L
Sbjct: 592 HPEQESILKILDELDGLLREAGYNPDCSY-ALHDVDEEEKVNSLKYHSERLAVAYALLKL 650
Query: 560 KPGMPIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHFKDGSCSCMDYW 614
G+PIRV KNLRVC DCH K+IS++ EII+RD RFHHF++G CSC DYW
Sbjct: 651 SEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 27/245 (11%)
Query: 174 NSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILFEP 233
N L+ Y G +D A KVFD M ER++VSW ++ +V G+ D A LF +M E
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP---EK 139
Query: 234 DGYTFQSITSACAGLATLSLGMWAHAYILRHCD-HSLVTDV--LVNNSLIDMYCKCGSLD 290
+ ++ + +G I C + ++ D + S+I CK G +D
Sbjct: 140 NKVSW----------TVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVD 189
Query: 291 IARQVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSAC 350
AR++F+ M +R + +W +++ G+ + R + A K FD V+ E +++ +L
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD--VMPEK---TEVSWTSMLMGY 244
Query: 351 NHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVI 410
G + + + F+VM + PV+ ++ L + G I +A + +M + DA
Sbjct: 245 VQNGRIEDAEELFEVM----PVKPVIA-CNAMISGLGQKGEIAKARRVFDSMKERNDAS- 298
Query: 411 WRSLL 415
W++++
Sbjct: 299 WQTVI 303
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 135/296 (45%), Gaps = 29/296 (9%)
Query: 73 RIIHFASFADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVL 132
RI H + + A ++F ++ + +WN+++ ++ + A LF M
Sbjct: 23 RITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR-DARKLFDEM------- 74
Query: 133 PDKHTFPFALKACAYL--FAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLAN 190
PD++ + Y+ + ++ + +R +VS +L+ Y G +D+A
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS----WTALVKGYVHNGKVDVAE 130
Query: 191 KVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILFEPDGYTFQSITSACAGLAT 250
+F M E++ VSW VM+ F+Q G D A KL+ + PD TS GL
Sbjct: 131 SLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI-----PDKDNIAR-TSMIHGLCK 184
Query: 251 LSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSI 310
A + S++T +++ Y + +D AR++F+ MP++ SW S+
Sbjct: 185 EGRVDEAREIFDEMSERSVIT----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSM 240
Query: 311 ILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVM 366
++G+ +GR E A + F+ + V+ + N++ +S +G +++ R FD M
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVKPVIACNAM-----ISGLGQKGEIAKARRVFDSM 291
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 102/269 (37%), Gaps = 75/269 (27%)
Query: 174 NSLIHFYASCGHLDLANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQILFEP 233
N I + G + A K+FD+ +S+ SWN M+ + A KLF M P
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM-----P 75
Query: 234 DGYTFQSITSACAGLATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIAR 293
D +++ N L+ Y K G +D AR
Sbjct: 76 D------------------------------------RNIISWNGLVSGYMKNGEIDEAR 99
Query: 294 QVFESMPKRDLTSWNSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLS----- 348
+VF+ MP+R++ SW +++ G+ +G+ + A F ++ + S ++ +G L
Sbjct: 100 KVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSW-TVMLIGFLQDGRID 158
Query: 349 -ACN---------------------HRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDLL 386
AC G V E R+ FD M IT + +V
Sbjct: 159 DACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVIT-----WTTMVTGY 213
Query: 387 ARAGNIDEALHLVSNMPMKPDAVIWRSLL 415
+ +D+A + MP K + V W S+L
Sbjct: 214 GQNNRVDDARKIFDVMPEKTE-VSWTSML 241
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 136/335 (40%), Gaps = 60/335 (17%)
Query: 25 RNEGSFNNHSSLLSSLTECKSMSQL---KQIHAQALRTALPQQHKTLLIYSRIIH-FASF 80
+ +G +L+S L+ C S++ L KQ+HAQ +R Q + + S ++ +
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC---QFDVDVYVASVLMTMYIKC 379
Query: 81 ADLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPF 140
+L + +F + + + WN++I A S +A+ +F M G+ P++ TF
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYA-SHGLGEEALKVFCEMPLSGSTKPNEVTFVA 438
Query: 141 ALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERS 200
L AC+Y +G + + + V+ + YA
Sbjct: 439 TLSACSYAGMVEEGLKIYESM------ESVFGVKPITAHYA------------------- 473
Query: 201 LVSWNVMIDAFVQFGEFDSALKLFRRMQILFEPDGYTFQSITSACAGLATLSLGMWAHAY 260
M+D + G F+ A+++ M + EPD + S+ AC + L + +
Sbjct: 474 -----CMVDMLGRAGRFNEAMEMIDSMTV--EPDAAVWGSLLGACRTHSQLDVAEFCAKK 526
Query: 261 ILRHCDHSLVTDVLVNNSLIDMYCKCGSL-DIA--RQVFES--MPKRDLTSWNSI----- 310
++ + T +L++N MY G D+A R++ ++ + K SW +
Sbjct: 527 LIEIEPENSGTYILLSN----MYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVH 582
Query: 311 ---ILGFALHGRAEAALKYFDR---LVVEESFSPN 339
G H E+ LK D L+ E ++P+
Sbjct: 583 AFTRGGINSHPEQESILKILDELDGLLREAGYNPD 617
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/592 (35%), Positives = 332/592 (56%), Gaps = 26/592 (4%)
Query: 32 NHSSLLSSLTECKSMSQLK---QIHAQALRTAL--PQQHKTLLIYSRIIHFASFADLDYA 86
+ SS S + C ++ +L+ Q+H ++ Q +T L+ + + A LD A
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM---VAYSKCTAMLD-A 349
Query: 87 FRVFYQIE-NPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKAC 145
R+F +I N +W +I ++ D K +A+ LF M +G V P++ T+ L A
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQN-DGKEEAVDLFSEMKRKG-VRPNEFTYSVILTAL 407
Query: 146 AYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWN 205
+ + HA + K + +L+ Y G ++ A KVF + ++ +V+W+
Sbjct: 408 PVI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463
Query: 206 VMIDAFVQFGEFDSALKLFRRM-QILFEPDGYTFQSITSACAGL-ATLSLGMWAHAYILR 263
M+ + Q GE ++A+K+F + + +P+ +TF SI + CA A++ G H + ++
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 264 HCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIILGFALHGRAEAA 323
L + + V+++L+ MY K G+++ A +VF+ ++DL SWNS+I G+A HG+A A
Sbjct: 524 S---RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580
Query: 324 LKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLV 383
L F + + + +TF+GV +AC H G+V EG YFD+M+ + I P EH C+V
Sbjct: 581 LDVFKEMK-KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 384 DLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIESEGGIC 443
DL +RAG +++A+ ++ NMP + IWR++L A C+ H L A+++I +
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL-AACRVHKKTELGRLAAEKIIAMKPED- 697
Query: 444 SGVYVLLSRVYASARRWNDVGLVRKLMTDKGVTKEPGCSSIEIDGIAHEFFAGDTSHPQT 503
S YVLLS +YA + W + VRKLM ++ V KEPG S IE+ + F AGD SHP
Sbjct: 698 SAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLK 757
Query: 504 KQIYGFLDLIDEKLKSRGYTPDYSQAAMVDELDDGKQSSLRLHSERLAIALGILNLKPGM 563
QIY L+ + +LK GY PD S + D D+ K++ L HSERLAIA G++ G
Sbjct: 758 DQIYMKLEDLSTRLKDLGYEPDTSY-VLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGS 816
Query: 564 PIRVFKNLRVCKDCHEVTKLISRIFNVEIIVRDRARFHHF-KDGSCSCMDYW 614
P+ + KNLRVC DCH V KLI++I EI+VRD RFHHF DG CSC D+W
Sbjct: 817 PLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 167/358 (46%), Gaps = 19/358 (5%)
Query: 88 RVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFALKACAY 147
+VF +++ N TW TLI AR+ + + LF RM +G P+ TF AL A
Sbjct: 149 KVFDEMKERNVVTWTTLISGYARN-SMNDEVLTLFMRMQNEG-TQPNSFTFAAALGVLAE 206
Query: 148 LFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVFDNMLERSLVSWNVM 207
+G Q H + K GL + ++NSLI+ Y CG++ A +FD +S+V+WN M
Sbjct: 207 EGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 266
Query: 208 IDAFVQFGEFDSALKLFRRMQILF-EPDGYTFQSITSACAGLATLSLGMWAHAYILRHCD 266
I + G AL +F M++ + +F S+ CA L L H +++
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK--- 323
Query: 267 HSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMP-KRDLTSWNSIILGFALHGRAEAALK 325
+ + D + +L+ Y KC ++ A ++F+ + ++ SW ++I GF + E A+
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383
Query: 326 YFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMINEYNITPVLEHYGCLVDL 385
F + + PN T+ +L+A ++S + V+ Y + + L+D
Sbjct: 384 LFSEM-KRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVGT--ALLDA 437
Query: 386 LARAGNIDEALHLVSNMPMKPDAVIWRSLLDACCKKHASVVLSEEVAKQVIE-SEGGI 442
+ G ++EA + S + K D V W ++L +A +E K E ++GGI
Sbjct: 438 YVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAG----YAQTGETEAAIKMFGELTKGGI 490
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 4/195 (2%)
Query: 134 DKHTFPFALKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYASCGHLDLANKVF 193
D F LK A L G+Q H K G + DV + SL+ Y + KVF
Sbjct: 92 DCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 194 DNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAGLATLS 252
D M ER++V+W +I + + D L LF RMQ +P+ +TF + A
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 253 LGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSWNSIIL 312
G+ H +++ + L + V+NSLI++Y KCG++ AR +F+ + + +WNS+I
Sbjct: 212 RGLQVHTVVVK---NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 313 GFALHGRAEAALKYF 327
G+A +G AL F
Sbjct: 269 GYAANGLDLEALGMF 283
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
Query: 189 ANKVFDNMLERSLVSWNVMIDAFVQFGEFDSALKLFRRMQIL-FEPDGYTFQSITSACAG 247
A+ +FD R S+ ++ F + G A +LF + L E D F S+ A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 248 LATLSLGMWAHAYILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESMPKRDLTSW 307
L G H ++ + DV V SL+D Y K + R+VF+ M +R++ +W
Sbjct: 106 LCDELFGRQLHCQCIKF---GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 308 NSIILGFALHGRAEAALKYFDRLVVEESFSPNSITFVGVLSACNHRGMVSEGRDYFDVMI 367
++I G+A + + L F R+ E PNS TF L G+ G V++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRM-QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 368 NEYNITPVLEHYGCLVDLLARAGNIDEALHLVSNMPMKPDAVIWRSLLDA 417
+ + L++L + GN+ +A L +K V W S++
Sbjct: 222 KN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISG 269
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 223,484,024
Number of Sequences: 539616
Number of extensions: 8965867
Number of successful extensions: 36677
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 30362
Number of HSP's gapped (non-prelim): 1525
length of query: 614
length of database: 191,569,459
effective HSP length: 124
effective length of query: 490
effective length of database: 124,657,075
effective search space: 61081966750
effective search space used: 61081966750
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)