Query 038208
Match_columns 228
No_of_seqs 191 out of 1614
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 14:45:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038208.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038208hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 3E-43 1E-47 302.9 18.2 219 2-225 17-278 (353)
2 3p9c_A Caffeic acid O-methyltr 100.0 1.3E-39 4.5E-44 281.2 21.9 222 1-225 28-293 (364)
3 3lst_A CALO1 methyltransferase 100.0 3.8E-39 1.3E-43 276.6 21.2 214 1-225 30-281 (348)
4 3reo_A (ISO)eugenol O-methyltr 100.0 6.3E-39 2.1E-43 277.3 19.8 221 2-225 30-295 (368)
5 3i53_A O-methyltransferase; CO 100.0 4.5E-39 1.5E-43 274.3 16.5 215 1-225 13-269 (332)
6 3gwz_A MMCR; methyltransferase 100.0 2E-38 6.7E-43 274.3 15.9 214 2-225 47-302 (369)
7 1fp2_A Isoflavone O-methyltran 100.0 9.6E-38 3.3E-42 268.2 19.8 219 2-225 25-283 (352)
8 1zg3_A Isoflavanone 4'-O-methy 100.0 1.6E-37 5.5E-42 267.4 19.4 221 2-224 19-287 (358)
9 1fp1_D Isoliquiritigenin 2'-O- 100.0 2.4E-36 8.3E-41 261.3 21.3 222 2-225 33-301 (372)
10 2ip2_A Probable phenazine-spec 100.0 7.3E-37 2.5E-41 260.7 17.5 211 2-225 17-267 (334)
11 3dp7_A SAM-dependent methyltra 100.0 6.3E-37 2.2E-41 264.3 17.0 212 2-225 24-282 (363)
12 1qzz_A RDMB, aclacinomycin-10- 100.0 1.6E-34 5.5E-39 249.6 17.2 214 1-224 24-281 (374)
13 1tw3_A COMT, carminomycin 4-O- 100.0 4.2E-34 1.4E-38 245.9 17.1 213 2-224 28-282 (360)
14 1x19_A CRTF-related protein; m 100.0 1.6E-33 5.4E-38 242.5 19.3 213 2-225 40-290 (359)
15 3mcz_A O-methyltransferase; ad 100.0 2.8E-33 9.7E-38 240.1 17.8 206 2-225 33-282 (352)
16 2r3s_A Uncharacterized protein 100.0 5.8E-33 2E-37 236.3 18.0 206 2-224 15-265 (335)
17 4gek_A TRNA (CMO5U34)-methyltr 99.8 5.2E-18 1.8E-22 139.7 11.2 95 131-225 68-173 (261)
18 3dtn_A Putative methyltransfer 99.7 3.3E-16 1.1E-20 126.0 9.8 94 132-225 43-143 (234)
19 2qe6_A Uncharacterized protein 99.6 1.4E-15 4.8E-20 126.0 11.0 93 133-225 77-191 (274)
20 4hg2_A Methyltransferase type 99.6 3.8E-15 1.3E-19 122.3 10.3 89 132-225 38-130 (257)
21 1ve3_A Hypothetical protein PH 99.6 1.5E-15 5.2E-20 121.3 7.5 92 132-225 37-137 (227)
22 3ou2_A SAM-dependent methyltra 99.6 8.5E-15 2.9E-19 116.1 11.0 102 120-225 35-141 (218)
23 3jwg_A HEN1, methyltransferase 99.6 3.1E-15 1.1E-19 119.2 7.4 93 132-224 28-135 (219)
24 3hnr_A Probable methyltransfer 99.6 7.5E-15 2.6E-19 116.9 9.6 100 121-225 36-140 (220)
25 1vl5_A Unknown conserved prote 99.6 4.9E-15 1.7E-19 121.1 8.6 100 119-225 26-135 (260)
26 1pjz_A Thiopurine S-methyltran 99.6 3.3E-15 1.1E-19 118.2 7.1 93 131-225 20-135 (203)
27 3jwh_A HEN1; methyltransferase 99.6 5.3E-15 1.8E-19 117.7 8.1 95 131-225 27-136 (217)
28 3dli_A Methyltransferase; PSI- 99.6 1.5E-14 5.1E-19 116.9 10.1 91 131-225 39-135 (240)
29 3ujc_A Phosphoethanolamine N-m 99.6 7.1E-15 2.4E-19 120.0 8.1 94 131-225 53-154 (266)
30 3dlc_A Putative S-adenosyl-L-m 99.5 2.1E-14 7.1E-19 113.7 9.9 88 135-225 45-143 (219)
31 3ege_A Putative methyltransfer 99.5 4.8E-14 1.6E-18 115.6 12.2 97 120-224 24-124 (261)
32 3pfg_A N-methyltransferase; N, 99.5 2.6E-14 8.9E-19 117.0 9.8 93 131-225 48-146 (263)
33 1xtp_A LMAJ004091AAA; SGPP, st 99.5 5.9E-15 2E-19 119.9 5.7 94 131-225 91-192 (254)
34 3g07_A 7SK snRNA methylphospha 99.5 1.4E-14 4.7E-19 121.0 7.0 95 131-225 44-215 (292)
35 3dh0_A SAM dependent methyltra 99.5 2.6E-14 9E-19 113.6 8.1 101 120-225 27-138 (219)
36 1nkv_A Hypothetical protein YJ 99.5 2.3E-14 8E-19 116.6 7.7 92 131-225 34-135 (256)
37 3mgg_A Methyltransferase; NYSG 99.5 3E-14 1E-18 117.4 8.4 93 131-225 35-137 (276)
38 3h2b_A SAM-dependent methyltra 99.5 1.8E-14 6.2E-19 113.3 6.8 90 134-225 42-136 (203)
39 2o57_A Putative sarcosine dime 99.5 3.6E-14 1.2E-18 118.1 8.8 92 131-225 80-182 (297)
40 3ggd_A SAM-dependent methyltra 99.5 3.3E-14 1.1E-18 115.1 8.3 93 131-225 54-158 (245)
41 3g5l_A Putative S-adenosylmeth 99.5 4.3E-14 1.5E-18 115.0 9.0 90 133-225 44-140 (253)
42 3ccf_A Cyclopropane-fatty-acyl 99.5 2.6E-14 8.8E-19 118.1 7.8 101 118-225 45-149 (279)
43 3gu3_A Methyltransferase; alph 99.5 2.5E-14 8.5E-19 118.7 7.5 93 131-225 20-121 (284)
44 3vc1_A Geranyl diphosphate 2-C 99.5 8.5E-14 2.9E-18 117.0 10.3 91 131-225 115-216 (312)
45 3bus_A REBM, methyltransferase 99.5 5E-14 1.7E-18 115.7 8.6 100 120-225 51-161 (273)
46 1kpg_A CFA synthase;, cyclopro 99.5 5.6E-14 1.9E-18 116.4 8.9 94 131-225 62-163 (287)
47 1xxl_A YCGJ protein; structura 99.5 6.2E-14 2.1E-18 113.4 8.7 99 120-225 11-119 (239)
48 2p35_A Trans-aconitate 2-methy 99.5 2.8E-14 9.5E-19 116.2 6.5 93 131-225 31-127 (259)
49 1af7_A Chemotaxis receptor met 99.5 4.8E-14 1.7E-18 116.6 8.0 93 133-225 105-247 (274)
50 2xvm_A Tellurite resistance pr 99.5 7.6E-14 2.6E-18 109.0 8.7 100 121-225 23-131 (199)
51 3bkw_A MLL3908 protein, S-aden 99.5 7E-14 2.4E-18 112.7 8.6 91 132-225 42-139 (243)
52 3g5t_A Trans-aconitate 3-methy 99.5 8.1E-14 2.8E-18 116.3 9.2 91 132-225 35-144 (299)
53 3e23_A Uncharacterized protein 99.5 3.1E-14 1.1E-18 112.7 6.1 93 131-225 41-136 (211)
54 2gb4_A Thiopurine S-methyltran 99.5 4.2E-14 1.5E-18 115.7 6.7 92 132-225 67-186 (252)
55 2p7i_A Hypothetical protein; p 99.5 5.4E-14 1.8E-18 113.4 7.0 90 132-225 41-136 (250)
56 3lcc_A Putative methyl chlorid 99.5 5E-14 1.7E-18 113.4 6.7 90 134-225 67-166 (235)
57 3hem_A Cyclopropane-fatty-acyl 99.5 1.2E-13 4E-18 115.5 9.1 101 121-225 63-178 (302)
58 3l8d_A Methyltransferase; stru 99.5 1.5E-13 5.1E-18 110.7 9.2 91 131-225 51-148 (242)
59 3bxo_A N,N-dimethyltransferase 99.5 1.9E-13 6.7E-18 109.8 9.6 92 132-225 39-136 (239)
60 2fk8_A Methoxy mycolic acid sy 99.5 1.5E-13 5E-18 115.7 9.0 94 131-225 88-189 (318)
61 3ocj_A Putative exported prote 99.5 3E-14 1E-18 119.4 4.6 95 131-225 116-222 (305)
62 3g2m_A PCZA361.24; SAM-depende 99.5 1.3E-13 4.3E-18 115.2 8.2 91 133-225 82-185 (299)
63 2yqz_A Hypothetical protein TT 99.5 2.4E-13 8.3E-18 110.7 9.7 91 131-225 37-136 (263)
64 2qm3_A Predicted methyltransfe 99.5 4.8E-14 1.6E-18 121.6 5.7 88 133-224 172-271 (373)
65 3f4k_A Putative methyltransfer 99.5 1.1E-13 3.7E-18 112.7 7.4 91 131-225 44-145 (257)
66 3m70_A Tellurite resistance pr 99.5 1.8E-13 6.2E-18 113.4 8.8 101 120-225 110-218 (286)
67 3ofk_A Nodulation protein S; N 99.4 1.2E-13 4.2E-18 109.5 7.3 92 132-225 50-149 (216)
68 2ex4_A Adrenal gland protein A 99.4 6.6E-14 2.3E-18 113.2 5.6 92 133-225 79-180 (241)
69 1wzn_A SAM-dependent methyltra 99.4 5.5E-13 1.9E-17 108.2 11.1 92 132-225 40-140 (252)
70 2p8j_A S-adenosylmethionine-de 99.4 2.2E-13 7.6E-18 107.3 8.5 94 131-225 21-123 (209)
71 4fsd_A Arsenic methyltransfera 99.4 1.6E-13 5.4E-18 118.8 8.1 92 132-225 82-198 (383)
72 3kkz_A Uncharacterized protein 99.4 1.1E-13 3.6E-18 113.7 6.6 91 131-225 44-145 (267)
73 3thr_A Glycine N-methyltransfe 99.4 8.8E-14 3E-18 115.5 5.9 93 131-225 55-170 (293)
74 3cgg_A SAM-dependent methyltra 99.4 1E-12 3.6E-17 101.8 11.5 93 131-225 44-142 (195)
75 4htf_A S-adenosylmethionine-de 99.4 1.3E-13 4.6E-18 114.1 6.3 89 133-225 68-168 (285)
76 3sm3_A SAM-dependent methyltra 99.4 2.7E-13 9.1E-18 108.5 7.7 93 131-225 28-136 (235)
77 3d2l_A SAM-dependent methyltra 99.4 4.2E-13 1.4E-17 108.0 8.9 92 131-225 31-132 (243)
78 1y8c_A S-adenosylmethionine-de 99.4 3.6E-13 1.2E-17 108.5 8.2 91 133-225 37-137 (246)
79 3i9f_A Putative type 11 methyl 99.4 9.7E-14 3.3E-18 106.1 4.5 89 131-225 15-107 (170)
80 3e05_A Precorrin-6Y C5,15-meth 99.4 1.3E-12 4.5E-17 102.9 10.2 96 122-225 32-137 (204)
81 2pxx_A Uncharacterized protein 99.4 6.8E-13 2.3E-17 104.7 7.6 94 131-225 40-154 (215)
82 3orh_A Guanidinoacetate N-meth 99.4 1.9E-13 6.3E-18 110.7 3.5 91 132-225 59-165 (236)
83 3hm2_A Precorrin-6Y C5,15-meth 99.4 7E-13 2.4E-17 101.7 6.5 88 131-225 23-122 (178)
84 2aot_A HMT, histamine N-methyl 99.4 8.8E-13 3E-17 109.8 7.0 91 133-225 52-167 (292)
85 3uwp_A Histone-lysine N-methyl 99.4 1.3E-12 4.3E-17 113.0 8.1 92 131-225 171-283 (438)
86 3iv6_A Putative Zn-dependent a 99.4 1.4E-12 4.8E-17 107.0 8.0 100 120-225 35-143 (261)
87 3bgv_A MRNA CAP guanine-N7 met 99.3 3.4E-12 1.2E-16 107.2 10.2 116 105-225 10-150 (313)
88 1ri5_A MRNA capping enzyme; me 99.3 1.5E-12 5.2E-17 107.9 7.4 94 131-225 62-169 (298)
89 2gs9_A Hypothetical protein TT 99.3 1.4E-12 4.8E-17 103.0 6.6 87 132-225 35-127 (211)
90 4dcm_A Ribosomal RNA large sub 99.3 1.7E-12 5.9E-17 111.9 7.6 94 132-225 221-329 (375)
91 3mq2_A 16S rRNA methyltransfer 99.3 2E-12 6.8E-17 102.8 7.3 93 131-225 25-135 (218)
92 1yzh_A TRNA (guanine-N(7)-)-me 99.3 3.3E-12 1.1E-16 101.4 8.6 92 133-225 41-151 (214)
93 3fzg_A 16S rRNA methylase; met 99.3 1.7E-13 5.7E-18 106.6 0.9 91 131-225 47-147 (200)
94 3cc8_A Putative methyltransfer 99.3 1.6E-12 5.5E-17 103.4 6.5 89 132-225 31-125 (230)
95 3htx_A HEN1; HEN1, small RNA m 99.3 3E-12 1E-16 118.5 9.1 92 132-223 720-828 (950)
96 3dxy_A TRNA (guanine-N(7)-)-me 99.3 9.2E-13 3.1E-17 105.4 4.9 92 133-225 34-145 (218)
97 3b3j_A Histone-arginine methyl 99.3 3.1E-12 1.1E-16 113.7 8.7 102 120-225 148-258 (480)
98 3bkx_A SAM-dependent methyltra 99.3 2.9E-12 1E-16 105.2 7.9 100 121-225 34-154 (275)
99 2pjd_A Ribosomal RNA small sub 99.3 8.7E-13 3E-17 112.4 4.8 103 120-225 186-298 (343)
100 2fca_A TRNA (guanine-N(7)-)-me 99.3 4E-12 1.4E-16 101.2 8.0 92 133-225 38-148 (213)
101 2y1w_A Histone-arginine methyl 99.3 2E-12 6.8E-17 110.5 6.4 94 131-225 48-150 (348)
102 3fpf_A Mtnas, putative unchara 99.3 3.9E-12 1.3E-16 105.8 7.8 90 131-225 120-217 (298)
103 3q87_B N6 adenine specific DNA 99.3 8E-12 2.8E-16 95.9 9.0 87 132-225 22-118 (170)
104 1vlm_A SAM-dependent methyltra 99.3 2.6E-12 8.9E-17 102.3 6.4 83 134-225 48-134 (219)
105 1dus_A MJ0882; hypothetical pr 99.3 7.5E-12 2.6E-16 96.9 8.8 99 121-225 43-152 (194)
106 3giw_A Protein of unknown func 99.3 8.9E-12 3E-16 102.6 9.6 93 133-225 78-195 (277)
107 3e8s_A Putative SAM dependent 99.3 1.7E-12 5.9E-17 103.1 5.3 90 131-225 50-147 (227)
108 3mti_A RRNA methylase; SAM-dep 99.3 3.9E-12 1.3E-16 98.4 7.1 93 131-225 20-130 (185)
109 2vdw_A Vaccinia virus capping 99.3 2.5E-12 8.6E-17 107.8 6.4 92 133-225 48-164 (302)
110 4dzr_A Protein-(glutamine-N5) 99.3 4.4E-13 1.5E-17 105.7 1.4 94 132-225 29-159 (215)
111 1nt2_A Fibrillarin-like PRE-rR 99.3 7.8E-12 2.7E-16 99.4 8.7 91 131-225 55-156 (210)
112 1zx0_A Guanidinoacetate N-meth 99.3 1.9E-12 6.3E-17 104.4 4.9 93 132-225 59-165 (236)
113 2kw5_A SLR1183 protein; struct 99.3 5.8E-12 2E-16 98.8 7.4 89 132-225 29-126 (202)
114 1yb2_A Hypothetical protein TA 99.3 3.1E-12 1.1E-16 105.6 5.7 88 131-225 108-206 (275)
115 3mb5_A SAM-dependent methyltra 99.3 2E-12 6.9E-17 105.2 4.4 88 131-225 91-189 (255)
116 2b3t_A Protein methyltransfera 99.3 7.8E-12 2.7E-16 103.2 7.8 94 132-225 108-233 (276)
117 1jsx_A Glucose-inhibited divis 99.3 3.8E-12 1.3E-16 100.2 5.3 87 133-225 65-160 (207)
118 3q7e_A Protein arginine N-meth 99.3 9.1E-12 3.1E-16 106.4 7.9 94 131-225 64-168 (349)
119 3njr_A Precorrin-6Y methylase; 99.3 2.2E-11 7.5E-16 96.3 9.2 86 131-225 53-149 (204)
120 3p2e_A 16S rRNA methylase; met 99.2 5.6E-12 1.9E-16 101.3 5.8 93 132-225 23-134 (225)
121 1fbn_A MJ fibrillarin homologu 99.2 1.7E-11 5.7E-16 98.5 8.5 90 131-225 72-173 (230)
122 3gjy_A Spermidine synthase; AP 99.2 6.1E-12 2.1E-16 105.8 6.0 92 134-225 90-195 (317)
123 2avn_A Ubiquinone/menaquinone 99.2 6.5E-12 2.2E-16 102.7 6.0 91 132-225 53-147 (260)
124 3eey_A Putative rRNA methylase 99.2 1.6E-11 5.6E-16 95.9 7.6 95 131-225 20-134 (197)
125 2plw_A Ribosomal RNA methyltra 99.2 3.9E-11 1.3E-15 93.9 9.3 91 131-225 20-149 (201)
126 1o9g_A RRNA methyltransferase; 99.2 1.1E-11 3.8E-16 100.7 6.3 93 133-225 51-209 (250)
127 2zfu_A Nucleomethylin, cerebra 99.2 3.3E-11 1.1E-15 95.4 8.8 87 121-225 57-146 (215)
128 2fyt_A Protein arginine N-meth 99.2 3.9E-11 1.3E-15 102.1 9.6 94 131-225 62-166 (340)
129 3ckk_A TRNA (guanine-N(7)-)-me 99.2 2.4E-11 8.3E-16 98.2 7.9 93 132-225 45-163 (235)
130 1nv8_A HEMK protein; class I a 99.2 2.7E-11 9.4E-16 100.6 8.3 91 133-225 123-244 (284)
131 3grz_A L11 mtase, ribosomal pr 99.2 9.1E-12 3.1E-16 98.0 5.2 89 131-225 58-154 (205)
132 3ntv_A MW1564 protein; rossman 99.2 9.7E-12 3.3E-16 100.1 5.2 90 131-225 69-171 (232)
133 3lbf_A Protein-L-isoaspartate 99.2 3E-11 1E-15 95.3 7.7 85 131-225 75-169 (210)
134 3tfw_A Putative O-methyltransf 99.2 1.4E-11 4.7E-16 100.3 5.8 90 131-225 61-165 (248)
135 2i62_A Nicotinamide N-methyltr 99.2 2.6E-12 9E-17 104.7 1.5 92 133-225 56-193 (265)
136 3adn_A Spermidine synthase; am 99.2 1.1E-11 3.8E-16 103.5 5.2 94 132-225 82-193 (294)
137 2yxe_A Protein-L-isoaspartate 99.2 3.1E-11 1.1E-15 95.6 7.6 87 131-225 75-172 (215)
138 2bm8_A Cephalosporin hydroxyla 99.2 7E-11 2.4E-15 95.5 9.7 88 133-225 81-182 (236)
139 3p9n_A Possible methyltransfer 99.2 5.2E-11 1.8E-15 92.6 8.6 92 132-225 43-148 (189)
140 1g6q_1 HnRNP arginine N-methyl 99.2 4.2E-11 1.4E-15 101.4 8.7 94 131-225 36-140 (328)
141 2a14_A Indolethylamine N-methy 99.2 1.8E-12 6.3E-17 106.3 -0.1 92 133-225 55-192 (263)
142 1ej0_A FTSJ; methyltransferase 99.2 8.3E-11 2.8E-15 89.4 9.2 91 131-225 20-131 (180)
143 2ipx_A RRNA 2'-O-methyltransfe 99.2 3.7E-11 1.2E-15 96.6 7.5 91 131-225 75-177 (233)
144 1xdz_A Methyltransferase GIDB; 99.2 1.2E-11 4.1E-16 100.0 4.6 88 132-225 69-169 (240)
145 2g72_A Phenylethanolamine N-me 99.2 8.5E-12 2.9E-16 103.5 3.7 92 133-225 71-210 (289)
146 2ozv_A Hypothetical protein AT 99.2 3.3E-11 1.1E-15 98.8 7.0 95 131-225 34-165 (260)
147 4e2x_A TCAB9; kijanose, tetron 99.2 1.6E-11 5.6E-16 107.0 5.2 99 119-225 96-203 (416)
148 3bwc_A Spermidine synthase; SA 99.2 1.7E-11 5.9E-16 102.8 5.2 94 132-225 94-205 (304)
149 1jg1_A PIMT;, protein-L-isoasp 99.2 3.8E-11 1.3E-15 96.7 6.8 93 121-225 82-184 (235)
150 2h00_A Methyltransferase 10 do 99.2 8.9E-12 3E-16 101.4 3.1 92 133-224 65-186 (254)
151 3r0q_C Probable protein argini 99.2 4.2E-11 1.4E-15 103.3 7.3 94 131-225 61-164 (376)
152 3evz_A Methyltransferase; NYSG 99.2 3.6E-11 1.2E-15 96.2 6.4 94 131-225 53-174 (230)
153 3duw_A OMT, O-methyltransferas 99.2 3E-11 1E-15 96.3 5.8 90 131-225 56-162 (223)
154 1u2z_A Histone-lysine N-methyl 99.2 8.7E-11 3E-15 102.7 9.1 92 131-225 240-354 (433)
155 3g89_A Ribosomal RNA small sub 99.2 1.9E-11 6.5E-16 99.7 4.6 88 132-225 79-179 (249)
156 3u81_A Catechol O-methyltransf 99.1 1.8E-11 6E-16 97.7 4.0 92 131-225 56-165 (221)
157 2vdv_E TRNA (guanine-N(7)-)-me 99.1 3.1E-11 1.1E-15 98.0 5.5 89 132-225 48-168 (246)
158 2pwy_A TRNA (adenine-N(1)-)-me 99.1 6.5E-11 2.2E-15 96.1 7.4 95 121-225 87-193 (258)
159 3dmg_A Probable ribosomal RNA 99.1 9.3E-11 3.2E-15 101.3 8.6 91 133-225 233-335 (381)
160 3m33_A Uncharacterized protein 99.1 1.4E-11 4.7E-16 98.7 3.1 85 131-225 46-137 (226)
161 1l3i_A Precorrin-6Y methyltran 99.1 3.6E-11 1.2E-15 92.8 5.3 88 131-225 31-129 (192)
162 2gpy_A O-methyltransferase; st 99.1 1E-10 3.5E-15 93.9 7.8 90 131-225 52-155 (233)
163 1ws6_A Methyltransferase; stru 99.1 2.9E-11 1E-15 91.9 4.3 89 133-225 41-142 (171)
164 1vbf_A 231AA long hypothetical 99.1 9.9E-11 3.4E-15 93.6 7.6 85 131-225 68-160 (231)
165 1g8a_A Fibrillarin-like PRE-rR 99.1 2.3E-10 7.9E-15 91.4 9.7 91 131-225 71-173 (227)
166 3tr6_A O-methyltransferase; ce 99.1 5E-11 1.7E-15 95.0 5.7 90 131-225 62-169 (225)
167 3lcv_B Sisomicin-gentamicin re 99.1 8.6E-12 2.9E-16 101.4 0.9 93 132-225 131-231 (281)
168 1p91_A Ribosomal RNA large sub 99.1 1.3E-10 4.3E-15 95.2 7.8 85 132-225 84-173 (269)
169 1dl5_A Protein-L-isoaspartate 99.1 1.1E-10 3.8E-15 98.3 7.6 87 131-225 73-170 (317)
170 3r3h_A O-methyltransferase, SA 99.1 5E-11 1.7E-15 96.8 5.2 90 131-225 58-165 (242)
171 3kr9_A SAM-dependent methyltra 99.1 1.1E-10 3.8E-15 93.6 6.9 90 131-224 13-113 (225)
172 3dr5_A Putative O-methyltransf 99.1 5.8E-11 2E-15 95.1 5.0 86 135-225 58-158 (221)
173 3lpm_A Putative methyltransfer 99.1 1.3E-10 4.5E-15 94.9 7.2 94 131-225 46-171 (259)
174 2avd_A Catechol-O-methyltransf 99.1 6.9E-11 2.4E-15 94.4 5.4 90 131-225 67-174 (229)
175 1zq9_A Probable dimethyladenos 99.1 1.1E-10 3.7E-15 97.1 6.6 100 120-225 18-142 (285)
176 2yxd_A Probable cobalt-precorr 99.1 1.3E-10 4.4E-15 89.1 6.5 85 131-225 33-126 (183)
177 1o54_A SAM-dependent O-methylt 99.1 1.3E-10 4.4E-15 95.9 6.7 95 121-225 103-208 (277)
178 3frh_A 16S rRNA methylase; met 99.1 4.6E-11 1.6E-15 96.2 3.9 90 132-225 104-201 (253)
179 1iy9_A Spermidine synthase; ro 99.1 4.4E-11 1.5E-15 98.9 3.7 94 132-225 74-184 (275)
180 2i7c_A Spermidine synthase; tr 99.1 5.6E-11 1.9E-15 98.7 4.3 94 132-225 77-187 (283)
181 2esr_A Methyltransferase; stru 99.1 3.2E-11 1.1E-15 92.6 2.5 90 132-225 30-133 (177)
182 4df3_A Fibrillarin-like rRNA/T 99.1 2E-10 6.8E-15 92.6 7.2 91 131-225 75-177 (233)
183 3c3p_A Methyltransferase; NP_9 99.1 4.5E-11 1.5E-15 94.5 3.3 89 132-225 55-155 (210)
184 3gdh_A Trimethylguanosine synt 99.1 1.8E-11 6.2E-16 98.7 0.6 88 133-224 78-175 (241)
185 1sui_A Caffeoyl-COA O-methyltr 99.1 1.6E-10 5.6E-15 94.0 6.2 90 131-225 77-185 (247)
186 2fhp_A Methylase, putative; al 99.1 1.3E-10 4.3E-15 89.7 5.2 90 132-225 43-149 (187)
187 2oxt_A Nucleoside-2'-O-methylt 99.1 2.7E-10 9.1E-15 93.7 7.4 90 131-224 72-177 (265)
188 3dou_A Ribosomal RNA large sub 99.1 2.6E-10 9.1E-15 89.2 7.0 89 131-225 23-134 (191)
189 1mjf_A Spermidine synthase; sp 99.1 1E-10 3.4E-15 97.0 4.7 93 132-225 74-188 (281)
190 3sso_A Methyltransferase; macr 99.1 7.7E-11 2.6E-15 101.6 4.0 87 133-225 216-319 (419)
191 1xj5_A Spermidine synthase 1; 99.1 1E-10 3.4E-15 99.3 4.7 94 132-225 119-230 (334)
192 2wa2_A Non-structural protein 99.1 2.5E-10 8.5E-15 94.4 6.9 90 131-224 80-185 (276)
193 2hnk_A SAM-dependent O-methylt 99.0 1.7E-10 5.7E-15 93.1 5.6 90 131-225 58-176 (239)
194 2ift_A Putative methylase HI07 99.0 8.3E-11 2.8E-15 92.6 3.7 89 133-225 53-158 (201)
195 2nxc_A L11 mtase, ribosomal pr 99.0 1.6E-10 5.6E-15 94.3 5.5 88 131-225 118-213 (254)
196 2pt6_A Spermidine synthase; tr 99.0 7.7E-11 2.6E-15 99.6 3.6 94 132-225 115-225 (321)
197 2o07_A Spermidine synthase; st 99.0 7.9E-11 2.7E-15 98.8 3.5 94 132-225 94-204 (304)
198 2frn_A Hypothetical protein PH 99.0 1.5E-10 5.2E-15 95.7 5.1 88 131-225 123-220 (278)
199 2b2c_A Spermidine synthase; be 99.0 7.8E-11 2.7E-15 99.2 3.2 94 132-225 107-217 (314)
200 1uir_A Polyamine aminopropyltr 99.0 9.1E-11 3.1E-15 98.8 3.5 94 132-225 76-190 (314)
201 3tma_A Methyltransferase; thum 99.0 4.3E-10 1.5E-14 96.1 7.5 95 131-225 201-312 (354)
202 3c3y_A Pfomt, O-methyltransfer 99.0 2.4E-10 8.3E-15 92.3 5.7 90 131-225 68-176 (237)
203 2nyu_A Putative ribosomal RNA 99.0 5.3E-10 1.8E-14 87.0 7.4 91 131-225 20-140 (196)
204 3id6_C Fibrillarin-like rRNA/T 99.0 7.1E-10 2.4E-14 89.4 8.2 91 131-225 74-176 (232)
205 1ixk_A Methyltransferase; open 99.0 6.8E-10 2.3E-14 93.5 8.2 95 131-225 116-241 (315)
206 4hc4_A Protein arginine N-meth 99.0 4.6E-10 1.6E-14 96.5 7.3 92 133-225 83-184 (376)
207 2fpo_A Methylase YHHF; structu 99.0 3.3E-10 1.1E-14 89.2 5.9 89 133-225 54-155 (202)
208 3lec_A NADB-rossmann superfami 99.0 4.6E-10 1.6E-14 90.2 6.8 90 131-224 19-119 (230)
209 2pbf_A Protein-L-isoaspartate 99.0 1.1E-09 3.8E-14 87.3 9.0 87 131-225 78-188 (227)
210 2p41_A Type II methyltransfera 99.0 4.9E-10 1.7E-14 94.0 6.9 92 131-225 80-186 (305)
211 2h1r_A Dimethyladenosine trans 99.0 3.7E-10 1.3E-14 94.5 6.0 101 120-226 32-155 (299)
212 1i9g_A Hypothetical protein RV 99.0 5.1E-10 1.7E-14 92.1 6.8 88 131-225 97-198 (280)
213 1ne2_A Hypothetical protein TA 99.0 6E-10 2.1E-14 87.2 6.9 88 132-220 50-139 (200)
214 1r18_A Protein-L-isoaspartate( 99.0 3.2E-10 1.1E-14 90.7 5.3 87 131-225 82-189 (227)
215 1inl_A Spermidine synthase; be 99.0 1.8E-10 6.3E-15 96.1 4.0 94 132-225 89-200 (296)
216 2yvl_A TRMI protein, hypotheti 99.0 1.8E-09 6.2E-14 87.0 9.6 86 131-225 89-185 (248)
217 2cmg_A Spermidine synthase; tr 99.0 5.5E-10 1.9E-14 91.7 6.6 85 132-225 71-166 (262)
218 3gnl_A Uncharacterized protein 99.0 6.6E-10 2.3E-14 90.0 6.6 90 131-224 19-119 (244)
219 4azs_A Methyltransferase WBDD; 99.0 2.4E-10 8.3E-15 103.6 4.2 93 131-225 64-168 (569)
220 3a27_A TYW2, uncharacterized p 99.0 3.7E-10 1.3E-14 93.1 4.9 89 131-225 117-214 (272)
221 1i1n_A Protein-L-isoaspartate 99.0 1.1E-09 3.8E-14 87.2 7.4 87 131-225 75-177 (226)
222 3cbg_A O-methyltransferase; cy 98.9 3.6E-10 1.2E-14 90.9 3.7 89 132-225 71-177 (232)
223 2b25_A Hypothetical protein; s 98.9 1.1E-09 3.8E-14 92.7 6.8 95 121-225 96-214 (336)
224 3bzb_A Uncharacterized protein 98.9 2.8E-09 9.7E-14 88.2 8.6 90 132-224 78-199 (281)
225 3ajd_A Putative methyltransfer 98.9 1.4E-09 4.6E-14 89.8 6.0 95 131-225 81-206 (274)
226 3hp7_A Hemolysin, putative; st 98.9 2.2E-09 7.5E-14 89.2 6.6 87 133-225 85-180 (291)
227 3opn_A Putative hemolysin; str 98.9 7.5E-10 2.5E-14 89.3 3.0 85 133-225 37-132 (232)
228 1qam_A ERMC' methyltransferase 98.9 5.2E-09 1.8E-13 84.9 8.0 92 131-224 28-140 (244)
229 1wy7_A Hypothetical protein PH 98.9 4.5E-09 1.5E-13 82.5 7.0 88 132-220 48-141 (207)
230 1yub_A Ermam, rRNA methyltrans 98.9 3.9E-09 1.3E-13 85.6 6.8 101 120-225 19-140 (245)
231 2ih2_A Modification methylase 98.8 8.2E-09 2.8E-13 89.7 9.2 90 133-225 39-159 (421)
232 2f8l_A Hypothetical protein LM 98.8 2E-09 7E-14 91.5 4.7 93 133-225 130-251 (344)
233 2yxl_A PH0851 protein, 450AA l 98.8 9.3E-09 3.2E-13 90.6 8.9 95 131-225 257-384 (450)
234 2ld4_A Anamorsin; methyltransf 98.8 1.2E-09 4.1E-14 83.7 1.9 77 131-225 10-96 (176)
235 3m6w_A RRNA methylase; rRNA me 98.8 4.9E-09 1.7E-13 92.5 4.8 94 131-225 99-224 (464)
236 2igt_A SAM dependent methyltra 98.8 5.9E-09 2E-13 88.4 5.0 91 133-225 153-267 (332)
237 2frx_A Hypothetical protein YE 98.7 2.6E-08 9E-13 88.4 8.6 93 133-225 117-241 (479)
238 1sqg_A SUN protein, FMU protei 98.7 2E-08 6.9E-13 87.9 6.5 95 131-225 244-369 (429)
239 3gru_A Dimethyladenosine trans 98.7 3.5E-08 1.2E-12 82.2 7.6 88 120-213 40-135 (295)
240 3tm4_A TRNA (guanine N2-)-meth 98.6 1.6E-08 5.6E-13 86.9 4.6 90 131-220 215-321 (373)
241 3k6r_A Putative transferase PH 98.6 1.7E-08 5.7E-13 83.4 4.4 88 131-225 123-220 (278)
242 2xyq_A Putative 2'-O-methyl tr 98.6 4.7E-08 1.6E-12 81.2 6.9 87 131-225 61-166 (290)
243 3m4x_A NOL1/NOP2/SUN family pr 98.6 2.5E-08 8.5E-13 87.8 4.3 95 131-225 103-229 (456)
244 3k0b_A Predicted N6-adenine-sp 98.6 6.9E-08 2.4E-12 83.6 6.8 92 131-222 199-340 (393)
245 3ftd_A Dimethyladenosine trans 98.6 1.1E-07 3.7E-12 77.4 7.3 90 120-213 21-116 (249)
246 1m6y_A S-adenosyl-methyltransf 98.6 8.1E-08 2.8E-12 80.2 6.7 76 119-197 15-104 (301)
247 3ldg_A Putative uncharacterize 98.6 2.3E-07 7.8E-12 80.1 9.6 92 131-222 192-333 (384)
248 2yx1_A Hypothetical protein MJ 98.6 4.4E-08 1.5E-12 83.1 4.8 85 132-225 194-286 (336)
249 2as0_A Hypothetical protein PH 98.6 2.5E-08 8.5E-13 86.4 3.3 92 133-225 217-330 (396)
250 3o4f_A Spermidine synthase; am 98.6 5.7E-08 2E-12 80.6 5.3 95 131-225 81-193 (294)
251 3fut_A Dimethyladenosine trans 98.6 1.4E-07 4.7E-12 77.7 7.5 87 121-214 38-132 (271)
252 1qyr_A KSGA, high level kasuga 98.5 9.1E-08 3.1E-12 77.9 6.2 89 120-213 11-111 (252)
253 1wxx_A TT1595, hypothetical pr 98.5 3.3E-08 1.1E-12 85.3 3.6 91 133-225 209-320 (382)
254 2qfm_A Spermine synthase; sper 98.5 6.2E-08 2.1E-12 82.5 4.7 93 132-225 187-309 (364)
255 3ldu_A Putative methylase; str 98.5 1.6E-07 5.4E-12 81.2 7.1 92 131-222 193-334 (385)
256 3c0k_A UPF0064 protein YCCW; P 98.5 4.7E-08 1.6E-12 84.6 3.4 93 132-225 219-334 (396)
257 1uwv_A 23S rRNA (uracil-5-)-me 98.5 2.2E-07 7.5E-12 81.4 7.3 86 131-224 284-383 (433)
258 3uzu_A Ribosomal RNA small sub 98.5 4.8E-08 1.7E-12 80.8 2.9 68 121-191 33-106 (279)
259 2b78_A Hypothetical protein SM 98.5 7E-08 2.4E-12 83.3 3.9 93 132-225 211-326 (385)
260 4dmg_A Putative uncharacterize 98.5 1.6E-07 5.4E-12 81.3 5.9 91 133-225 214-321 (393)
261 3tqs_A Ribosomal RNA small sub 98.5 1.1E-07 3.9E-12 77.5 4.7 66 120-190 19-90 (255)
262 4gqb_A Protein arginine N-meth 98.5 5.1E-08 1.8E-12 88.7 2.7 124 94-225 324-462 (637)
263 2okc_A Type I restriction enzy 98.5 9.1E-08 3.1E-12 84.1 4.1 93 133-225 171-302 (445)
264 2jjq_A Uncharacterized RNA met 98.4 4.2E-07 1.4E-11 79.5 6.5 87 131-225 288-382 (425)
265 3ua3_A Protein arginine N-meth 98.3 5.6E-07 1.9E-11 82.2 5.3 123 94-225 379-529 (745)
266 3b5i_A S-adenosyl-L-methionine 98.3 3E-06 1E-10 72.7 9.5 92 134-225 53-220 (374)
267 3v97_A Ribosomal RNA large sub 98.3 7.7E-07 2.6E-11 82.5 6.0 93 132-225 538-652 (703)
268 3evf_A RNA-directed RNA polyme 98.2 4.1E-06 1.4E-10 68.4 7.2 95 131-225 72-179 (277)
269 2r6z_A UPF0341 protein in RSP 98.1 1.2E-06 3.9E-11 71.6 3.5 71 131-203 81-173 (258)
270 3v97_A Ribosomal RNA large sub 98.1 5.9E-06 2E-10 76.5 7.9 95 131-225 188-342 (703)
271 2k4m_A TR8_protein, UPF0146 pr 98.1 1.3E-05 4.4E-10 59.3 8.0 74 131-219 33-112 (153)
272 2efj_A 3,7-dimethylxanthine me 98.1 4.7E-06 1.6E-10 71.6 6.6 72 134-205 53-163 (384)
273 2b9e_A NOL1/NOP2/SUN domain fa 98.1 1E-05 3.4E-10 67.8 8.3 67 131-197 100-180 (309)
274 2dul_A N(2),N(2)-dimethylguano 98.0 5.4E-06 1.9E-10 71.3 6.0 87 133-225 47-159 (378)
275 3bt7_A TRNA (uracil-5-)-methyl 98.0 1.2E-06 4E-11 75.2 1.4 52 134-187 214-272 (369)
276 3c6k_A Spermine synthase; sper 98.0 3.7E-06 1.3E-10 71.9 4.4 92 133-225 205-326 (381)
277 1m6e_X S-adenosyl-L-methionnin 98.0 1.4E-05 4.6E-10 68.2 7.1 94 132-225 50-204 (359)
278 2ar0_A M.ecoki, type I restric 97.9 9.7E-06 3.3E-10 72.9 5.5 93 133-225 169-307 (541)
279 3axs_A Probable N(2),N(2)-dime 97.9 4.8E-06 1.6E-10 71.9 3.0 87 133-225 52-153 (392)
280 2oyr_A UPF0341 protein YHIQ; a 97.9 1.3E-05 4.3E-10 65.4 5.2 79 120-203 76-176 (258)
281 3gcz_A Polyprotein; flavivirus 97.9 1.4E-05 4.7E-10 65.4 5.2 94 131-225 88-196 (282)
282 3ll7_A Putative methyltransfer 97.7 1.2E-05 4.2E-10 69.7 3.1 63 133-197 93-169 (410)
283 1wg8_A Predicted S-adenosylmet 97.7 4.7E-05 1.6E-09 62.5 6.2 75 118-197 10-95 (285)
284 2qy6_A UPF0209 protein YFCK; s 97.7 2.7E-05 9.3E-10 63.4 4.0 93 133-225 60-208 (257)
285 1rjd_A PPM1P, carboxy methyl t 97.6 0.00024 8.2E-09 60.0 9.6 92 132-224 96-226 (334)
286 4auk_A Ribosomal RNA large sub 97.6 0.00019 6.7E-09 61.1 8.9 69 131-201 209-280 (375)
287 3s1s_A Restriction endonucleas 97.6 0.00013 4.5E-09 67.8 8.2 93 133-225 321-460 (878)
288 3khk_A Type I restriction-modi 97.5 3.8E-05 1.3E-09 69.1 3.2 92 134-225 245-390 (544)
289 3eld_A Methyltransferase; flav 97.5 0.00014 4.9E-09 59.8 5.8 95 131-225 79-186 (300)
290 2px2_A Genome polyprotein [con 97.3 0.00076 2.6E-08 54.4 7.4 93 130-224 70-176 (269)
291 3lkd_A Type I restriction-modi 97.2 0.00036 1.2E-08 62.7 5.9 93 133-225 221-353 (542)
292 2uyo_A Hypothetical protein ML 97.2 0.00072 2.5E-08 56.4 7.2 91 132-224 101-212 (310)
293 3tka_A Ribosomal RNA small sub 97.1 0.001 3.4E-08 55.9 7.0 67 118-187 45-115 (347)
294 3p8z_A Mtase, non-structural p 97.0 0.0014 4.6E-08 52.3 6.4 92 131-222 76-179 (267)
295 4fzv_A Putative methyltransfer 96.8 0.0018 6.1E-08 55.1 6.0 95 131-225 146-279 (359)
296 3cvo_A Methyltransferase-like 96.7 0.0029 1E-07 49.4 6.3 85 131-225 28-149 (202)
297 3lkz_A Non-structural protein 96.6 0.0084 2.9E-07 49.3 8.1 92 131-223 92-196 (321)
298 1i4w_A Mitochondrial replicati 96.5 0.0035 1.2E-07 53.2 5.9 54 134-187 59-116 (353)
299 2wk1_A NOVP; transferase, O-me 96.5 0.004 1.4E-07 51.2 6.0 90 132-225 105-239 (282)
300 2zig_A TTHA0409, putative modi 96.0 0.0064 2.2E-07 50.2 4.8 41 132-174 234-275 (297)
301 3r24_A NSP16, 2'-O-methyl tran 95.9 0.016 5.6E-07 47.7 6.4 88 131-225 107-212 (344)
302 3iei_A Leucine carboxyl methyl 95.5 0.15 5E-06 42.9 11.1 91 133-223 90-223 (334)
303 2vz8_A Fatty acid synthase; tr 94.8 0.011 3.6E-07 62.0 2.4 89 134-224 1241-1342(2512)
304 3ufb_A Type I restriction-modi 94.7 0.055 1.9E-06 48.3 6.4 89 133-221 217-346 (530)
305 3iht_A S-adenosyl-L-methionine 93.1 0.38 1.3E-05 35.7 7.2 81 103-188 15-95 (174)
306 1g60_A Adenine-specific methyl 92.9 0.15 5.1E-06 41.0 5.5 40 132-173 211-251 (260)
307 3vyw_A MNMC2; tRNA wobble urid 90.3 0.21 7E-06 41.4 3.6 88 133-225 96-221 (308)
308 1zkd_A DUF185; NESG, RPR58, st 89.6 0.56 1.9E-05 40.1 5.8 60 100-167 54-121 (387)
309 2py6_A Methyltransferase FKBM; 89.5 0.56 1.9E-05 40.3 5.9 54 132-185 225-291 (409)
310 3g7u_A Cytosine-specific methy 89.5 1.2 4.3E-05 37.7 8.0 69 135-205 3-85 (376)
311 2zwa_A Leucine carboxyl methyl 88.1 1.5 5.1E-05 40.3 8.0 86 133-218 107-244 (695)
312 2oo3_A Protein involved in cat 88.0 0.46 1.6E-05 38.8 4.0 88 133-224 91-192 (283)
313 3mq0_A Transcriptional repress 87.7 0.38 1.3E-05 39.0 3.3 45 15-63 32-90 (275)
314 3ggo_A Prephenate dehydrogenas 86.8 1.6 5.5E-05 36.0 6.8 86 134-224 33-122 (314)
315 3ew7_A LMO0794 protein; Q8Y8U8 86.6 2.1 7.3E-05 32.4 7.1 86 136-224 2-94 (221)
316 2heo_A Z-DNA binding protein 1 86.5 0.5 1.7E-05 29.5 2.8 41 15-59 12-66 (67)
317 3tos_A CALS11; methyltransfera 85.4 0.71 2.4E-05 37.1 3.8 90 132-225 68-212 (257)
318 1g55_A DNA cytosine methyltran 85.0 1.5 5.1E-05 36.7 5.8 71 135-205 3-82 (343)
319 1lss_A TRK system potassium up 84.2 4.2 0.00014 28.2 7.2 82 135-223 5-96 (140)
320 3llv_A Exopolyphosphatase-rela 83.8 3.9 0.00013 28.8 6.9 62 135-199 7-78 (141)
321 4f3n_A Uncharacterized ACR, CO 81.1 1.9 6.5E-05 37.3 4.9 57 99-165 113-174 (432)
322 3mag_A VP39; methylated adenin 81.0 1.5 5.2E-05 35.8 4.0 51 133-183 60-114 (307)
323 3r4k_A Transcriptional regulat 81.0 0.68 2.3E-05 37.1 2.0 44 16-62 9-66 (260)
324 2xrn_A HTH-type transcriptiona 79.4 1.3 4.4E-05 35.0 3.1 47 16-65 9-69 (241)
325 1mkm_A ICLR transcriptional re 79.3 1.8 6.1E-05 34.3 4.0 44 15-62 10-67 (249)
326 1y0u_A Arsenical resistance op 78.8 2.1 7E-05 28.4 3.6 47 9-63 27-87 (96)
327 2c7p_A Modification methylase 78.6 2.3 7.9E-05 35.3 4.6 68 134-205 11-85 (327)
328 3b73_A PHIH1 repressor-like pr 78.5 2.5 8.6E-05 29.3 4.0 49 15-68 15-79 (111)
329 2aef_A Calcium-gated potassium 76.6 15 0.00051 28.2 8.7 81 133-223 8-98 (234)
330 3b1f_A Putative prephenate deh 75.5 5.6 0.00019 31.8 6.0 84 135-223 7-94 (290)
331 3h2s_A Putative NADH-flavin re 75.2 12 0.00039 28.2 7.6 86 137-224 3-97 (224)
332 2g7u_A Transcriptional regulat 75.0 2.4 8.3E-05 33.7 3.7 47 15-66 16-76 (257)
333 2o0y_A Transcriptional regulat 74.9 2 6.8E-05 34.3 3.1 43 16-62 26-82 (260)
334 1boo_A Protein (N-4 cytosine-s 74.1 3.6 0.00012 33.9 4.6 40 132-173 251-291 (323)
335 3e48_A Putative nucleoside-dip 72.6 13 0.00043 29.4 7.4 82 142-225 7-98 (289)
336 3l9w_A Glutathione-regulated p 71.8 7.9 0.00027 33.1 6.3 82 134-223 4-95 (413)
337 3qv2_A 5-cytosine DNA methyltr 71.4 3.7 0.00013 34.1 4.0 70 133-204 9-89 (327)
338 2fu4_A Ferric uptake regulatio 70.3 2.5 8.7E-05 27.0 2.3 34 15-48 19-72 (83)
339 2ia2_A Putative transcriptiona 70.1 2.5 8.6E-05 33.8 2.6 43 15-62 23-79 (265)
340 2g5c_A Prephenate dehydrogenas 70.0 11 0.00038 29.8 6.6 84 136-224 3-90 (281)
341 3fwz_A Inner membrane protein 69.6 4.7 0.00016 28.5 3.8 83 134-223 7-98 (140)
342 3vrd_B FCCB subunit, flavocyto 69.0 4.6 0.00016 33.9 4.2 32 134-165 2-35 (401)
343 2g1u_A Hypothetical protein TM 68.4 22 0.00074 25.3 7.3 65 133-198 18-91 (155)
344 1u2w_A CADC repressor, cadmium 68.3 4.9 0.00017 27.9 3.6 53 7-61 36-102 (122)
345 3pqk_A Biofilm growth-associat 68.2 5.8 0.0002 26.3 3.9 51 8-61 18-82 (102)
346 2oqg_A Possible transcriptiona 68.2 3.5 0.00012 27.9 2.8 51 9-62 17-81 (114)
347 3ius_A Uncharacterized conserv 67.6 19 0.00066 28.2 7.5 79 135-216 6-88 (286)
348 4h0n_A DNMT2; SAH binding, tra 65.9 3.9 0.00013 34.0 3.1 71 135-205 4-83 (333)
349 3l4b_C TRKA K+ channel protien 65.4 9.8 0.00034 29.0 5.1 61 136-198 2-72 (218)
350 1eg2_A Modification methylase 65.2 11 0.00037 31.1 5.6 40 132-173 241-284 (319)
351 2fe3_A Peroxide operon regulat 65.0 9.4 0.00032 27.4 4.6 45 14-58 23-86 (145)
352 3dhn_A NAD-dependent epimerase 64.9 17 0.00059 27.3 6.5 86 135-224 5-103 (227)
353 3jth_A Transcription activator 64.7 4.7 0.00016 26.6 2.8 51 8-61 18-82 (98)
354 3mwm_A ZUR, putative metal upt 64.2 8.5 0.00029 27.4 4.3 47 12-58 13-78 (139)
355 3cuo_A Uncharacterized HTH-typ 63.5 5.9 0.0002 25.8 3.1 53 8-62 19-85 (99)
356 2o03_A Probable zinc uptake re 63.4 8.9 0.0003 27.0 4.2 46 12-57 10-74 (131)
357 3ic5_A Putative saccharopine d 63.3 29 0.00099 22.8 7.6 62 135-199 6-77 (118)
358 3qvo_A NMRA family protein; st 63.0 35 0.0012 26.0 8.0 82 136-224 25-116 (236)
359 3r6d_A NAD-dependent epimerase 62.9 6.8 0.00023 29.7 3.8 81 136-224 7-99 (221)
360 3ubt_Y Modification methylase 60.3 7.7 0.00026 31.7 3.9 67 136-204 2-74 (331)
361 1hdo_A Biliverdin IX beta redu 60.2 29 0.001 25.3 6.9 87 135-223 4-101 (206)
362 2wte_A CSA3; antiviral protein 60.0 8 0.00027 30.6 3.7 49 14-66 153-215 (244)
363 2qrv_A DNA (cytosine-5)-methyl 59.4 5.9 0.0002 32.3 2.9 72 132-203 14-95 (295)
364 3f6v_A Possible transcriptiona 58.9 7.9 0.00027 28.1 3.3 54 7-63 52-119 (151)
365 2zig_A TTHA0409, putative modi 58.7 6 0.00021 32.0 2.9 51 175-225 19-92 (297)
366 3sxp_A ADP-L-glycero-D-mannohe 58.0 18 0.0006 29.7 5.7 65 135-200 11-99 (362)
367 3ps9_A TRNA 5-methylaminomethy 57.8 11 0.00037 34.3 4.7 85 136-224 69-213 (676)
368 3dfz_A SIRC, precorrin-2 dehyd 57.7 11 0.00039 29.3 4.2 63 133-198 30-98 (223)
369 1on2_A Transcriptional regulat 57.6 11 0.00039 26.4 3.9 29 34-66 42-70 (142)
370 3fm5_A Transcriptional regulat 57.5 7 0.00024 27.7 2.8 53 14-66 40-108 (150)
371 1r1u_A CZRA, repressor protein 56.4 7.5 0.00026 26.1 2.7 51 8-61 21-85 (106)
372 4a5n_A Uncharacterized HTH-typ 56.1 15 0.00052 26.0 4.3 33 34-66 60-94 (131)
373 2xig_A Ferric uptake regulatio 56.1 14 0.00046 26.7 4.2 37 12-48 26-81 (150)
374 1mzb_A Ferric uptake regulatio 56.0 13 0.00045 26.2 4.0 45 14-58 19-83 (136)
375 1vpt_A VP39; RNA CAP, poly(A) 55.5 11 0.00038 31.2 3.9 66 134-200 76-154 (348)
376 1id1_A Putative potassium chan 55.0 52 0.0018 23.1 7.6 63 135-199 4-79 (153)
377 3hyw_A Sulfide-quinone reducta 53.2 12 0.00042 31.8 4.1 31 135-165 3-35 (430)
378 2jl1_A Triphenylmethane reduct 52.5 24 0.00084 27.5 5.6 84 140-225 5-99 (287)
379 3df8_A Possible HXLR family tr 51.9 15 0.00053 24.9 3.7 31 34-66 63-93 (111)
380 2kko_A Possible transcriptiona 51.8 4.5 0.00015 27.4 0.9 45 14-61 26-84 (108)
381 3dqp_A Oxidoreductase YLBE; al 50.9 29 0.001 25.9 5.6 59 137-199 3-71 (219)
382 2jsc_A Transcriptional regulat 50.6 7.3 0.00025 26.8 1.8 52 7-61 15-80 (118)
383 2hzt_A Putative HTH-type trans 50.1 20 0.0007 23.9 4.1 33 34-66 48-82 (107)
384 1r7j_A Conserved hypothetical 49.8 25 0.00084 23.2 4.4 28 34-66 40-67 (95)
385 3f6o_A Probable transcriptiona 49.3 12 0.00042 25.5 2.9 53 7-62 12-78 (118)
386 2vvp_A Ribose-5-phosphate isom 48.5 8.7 0.0003 28.5 2.0 49 137-185 64-114 (162)
387 2f2e_A PA1607; transcription f 48.3 21 0.00071 25.5 4.1 33 34-66 57-90 (146)
388 3bja_A Transcriptional regulat 48.1 16 0.00055 25.1 3.4 51 15-66 35-101 (139)
389 1xmk_A Double-stranded RNA-spe 48.1 24 0.00082 22.6 3.9 47 14-63 12-73 (79)
390 4id9_A Short-chain dehydrogena 47.8 35 0.0012 27.5 5.9 66 134-206 19-92 (347)
391 3bj6_A Transcriptional regulat 47.5 18 0.00061 25.4 3.6 51 15-66 42-108 (152)
392 3k0l_A Repressor protein; heli 47.5 24 0.00083 25.1 4.4 51 15-66 48-114 (162)
393 2hmt_A YUAA protein; RCK, KTN, 47.2 45 0.0015 22.7 5.7 61 135-198 7-77 (144)
394 4dvj_A Putative zinc-dependent 47.0 13 0.00043 31.0 3.1 85 133-225 171-265 (363)
395 2y75_A HTH-type transcriptiona 47.0 19 0.00066 24.9 3.7 33 27-61 25-71 (129)
396 2hr3_A Probable transcriptiona 46.7 27 0.00092 24.2 4.5 52 14-66 36-104 (147)
397 1qbj_A Protein (double-strande 46.7 26 0.00088 22.5 3.9 51 12-64 9-75 (81)
398 3s5p_A Ribose 5-phosphate isom 46.3 10 0.00035 28.2 2.1 40 138-177 82-121 (166)
399 3ech_A MEXR, multidrug resista 46.2 18 0.00061 25.1 3.4 52 14-66 38-105 (142)
400 3oop_A LIN2960 protein; protei 46.2 16 0.00056 25.3 3.2 51 15-66 39-105 (143)
401 3nrv_A Putative transcriptiona 46.1 19 0.00067 25.1 3.6 52 14-66 41-108 (148)
402 1o1x_A Ribose-5-phosphate isom 46.0 8.7 0.0003 28.2 1.7 40 137-176 72-111 (155)
403 3pvc_A TRNA 5-methylaminomethy 45.9 2.9 9.8E-05 38.3 -1.2 89 136-224 61-205 (689)
404 3he8_A Ribose-5-phosphate isom 45.9 10 0.00034 27.7 2.0 47 139-185 62-110 (149)
405 3cdh_A Transcriptional regulat 45.9 23 0.00078 25.0 4.0 51 15-66 45-111 (155)
406 2a61_A Transcriptional regulat 45.6 17 0.00057 25.3 3.2 51 15-66 35-101 (145)
407 3g3z_A NMB1585, transcriptiona 45.6 21 0.00072 24.8 3.7 51 15-66 33-99 (145)
408 2bll_A Protein YFBG; decarboxy 45.2 32 0.0011 27.6 5.3 57 141-197 6-73 (345)
409 3deu_A Transcriptional regulat 45.2 23 0.00077 25.6 3.9 52 15-66 55-122 (166)
410 2nnn_A Probable transcriptiona 45.1 17 0.00058 25.0 3.1 51 15-66 40-106 (140)
411 3slg_A PBGP3 protein; structur 44.9 21 0.0007 29.3 4.1 62 135-197 25-97 (372)
412 1ub9_A Hypothetical protein PH 44.4 12 0.00042 24.2 2.2 55 8-63 11-81 (100)
413 1yyv_A Putative transcriptiona 44.4 20 0.0007 25.1 3.5 33 34-66 69-103 (131)
414 1lnq_A MTHK channels, potassiu 44.3 35 0.0012 27.8 5.4 59 135-198 116-184 (336)
415 1r1t_A Transcriptional repress 44.3 20 0.00068 24.7 3.4 46 13-61 46-105 (122)
416 3eco_A MEPR; mutlidrug efflux 44.3 23 0.0008 24.3 3.8 52 15-66 33-101 (139)
417 4g65_A TRK system potassium up 44.2 17 0.00057 31.5 3.5 60 136-197 5-74 (461)
418 3bpv_A Transcriptional regulat 44.1 19 0.00065 24.7 3.3 51 15-66 31-97 (138)
419 2fa5_A Transcriptional regulat 44.0 21 0.00071 25.4 3.6 51 15-66 51-117 (162)
420 3bro_A Transcriptional regulat 43.3 26 0.0009 24.0 4.0 52 15-66 36-104 (141)
421 3ph3_A Ribose-5-phosphate isom 43.2 10 0.00035 28.3 1.7 48 138-185 81-130 (169)
422 2htj_A P fimbrial regulatory p 42.6 30 0.001 21.7 3.8 31 16-47 3-47 (81)
423 2o3j_A UDP-glucose 6-dehydroge 42.4 40 0.0014 29.3 5.7 88 135-223 10-128 (481)
424 2h09_A Transcriptional regulat 42.3 39 0.0013 23.9 4.8 29 34-66 74-102 (155)
425 2x4h_A Hypothetical protein SS 41.7 33 0.0011 23.7 4.3 28 34-66 51-78 (139)
426 2pex_A Transcriptional regulat 41.6 25 0.00086 24.7 3.7 51 15-66 49-115 (153)
427 1jgs_A Multiple antibiotic res 41.5 24 0.00083 24.1 3.5 51 15-66 36-102 (138)
428 3cjn_A Transcriptional regulat 41.1 22 0.00075 25.3 3.3 51 15-66 54-120 (162)
429 2k4b_A Transcriptional regulat 40.9 10 0.00035 25.4 1.3 15 34-48 73-87 (99)
430 3hsr_A HTH-type transcriptiona 40.8 18 0.00063 25.1 2.8 51 15-66 38-104 (140)
431 2km1_A Protein DRE2; yeast, an 40.7 11 0.00037 27.1 1.4 16 210-225 78-93 (136)
432 3boq_A Transcriptional regulat 40.7 18 0.00063 25.6 2.8 52 15-66 49-116 (160)
433 3k7p_A Ribose 5-phosphate isom 40.7 14 0.00046 27.9 2.0 48 138-185 85-134 (179)
434 4eqs_A Coenzyme A disulfide re 40.5 29 0.001 29.5 4.5 30 136-165 2-33 (437)
435 3bdd_A Regulatory protein MARR 40.3 31 0.001 23.6 3.9 51 15-66 33-99 (142)
436 2vvr_A Ribose-5-phosphate isom 40.2 8.1 0.00028 28.2 0.7 50 136-185 60-111 (149)
437 3ono_A Ribose/galactose isomer 40.0 10 0.00035 29.4 1.3 48 136-183 68-117 (214)
438 2ppw_A Conserved domain protei 40.0 8.9 0.0003 29.8 1.0 51 133-183 66-118 (216)
439 2jhp_A VP4 core protein; viral 39.9 24 0.00083 31.2 3.7 44 120-164 177-224 (644)
440 3c5y_A Ribose/galactose isomer 39.9 10 0.00035 29.7 1.3 48 136-183 85-134 (231)
441 3r0a_A Putative transcriptiona 39.9 19 0.00065 24.8 2.7 35 14-48 27-76 (123)
442 1tbx_A ORF F-93, hypothetical 39.2 30 0.001 22.4 3.5 32 34-66 46-77 (99)
443 3ruf_A WBGU; rossmann fold, UD 39.0 44 0.0015 26.9 5.2 65 134-199 25-108 (351)
444 2qww_A Transcriptional regulat 38.8 35 0.0012 23.8 4.1 51 15-66 43-111 (154)
445 1boo_A Protein (N-4 cytosine-s 38.8 19 0.00066 29.4 2.9 51 175-225 12-79 (323)
446 3e8x_A Putative NAD-dependent 38.7 43 0.0015 25.3 4.8 66 134-201 21-94 (236)
447 2rdp_A Putative transcriptiona 38.6 30 0.001 24.0 3.6 51 15-66 44-110 (150)
448 2gxg_A 146AA long hypothetical 38.4 41 0.0014 23.1 4.3 51 14-66 38-104 (146)
449 1lj9_A Transcriptional regulat 38.4 27 0.00093 24.1 3.4 51 15-66 31-97 (144)
450 2fsw_A PG_0823 protein; alpha- 38.3 22 0.00074 23.7 2.7 33 34-66 59-93 (107)
451 3sgw_A Ribose 5-phosphate isom 38.1 16 0.00054 27.6 2.0 47 139-185 94-142 (184)
452 3m2p_A UDP-N-acetylglucosamine 38.0 1.1E+02 0.0037 24.1 7.4 84 136-225 4-101 (311)
453 2x4g_A Nucleoside-diphosphate- 38.0 33 0.0011 27.5 4.3 62 136-199 15-85 (342)
454 3tri_A Pyrroline-5-carboxylate 37.9 36 0.0012 27.1 4.3 83 135-223 4-91 (280)
455 2fbh_A Transcriptional regulat 37.8 42 0.0015 23.0 4.3 51 15-66 39-106 (146)
456 2dph_A Formaldehyde dismutase; 37.8 23 0.00079 29.7 3.3 93 131-224 183-293 (398)
457 2w57_A Ferric uptake regulatio 37.7 17 0.00057 26.2 2.1 34 15-48 19-72 (150)
458 1s3j_A YUSO protein; structura 37.7 19 0.00064 25.3 2.4 51 15-66 39-105 (155)
459 1z7u_A Hypothetical protein EF 37.7 26 0.00088 23.6 3.0 33 34-66 56-90 (112)
460 2eth_A Transcriptional regulat 37.6 32 0.0011 24.2 3.7 52 14-66 45-112 (154)
461 3ulk_A Ketol-acid reductoisome 37.6 15 0.0005 32.1 2.0 85 132-223 35-125 (491)
462 4gx0_A TRKA domain protein; me 37.5 45 0.0015 29.3 5.3 73 135-214 128-210 (565)
463 3s2w_A Transcriptional regulat 37.5 28 0.00095 24.7 3.4 50 16-66 53-118 (159)
464 3lwf_A LIN1550 protein, putati 37.4 58 0.002 23.7 5.1 32 27-60 43-88 (159)
465 3d1l_A Putative NADP oxidoredu 37.2 50 0.0017 25.6 5.1 81 135-223 11-95 (266)
466 1p6r_A Penicillinase repressor 37.1 20 0.00069 22.5 2.3 15 34-48 47-61 (82)
467 1qgp_A Protein (double strande 36.8 31 0.001 21.8 3.1 46 13-60 14-75 (77)
468 1up7_A 6-phospho-beta-glucosid 36.6 29 0.001 29.6 3.8 64 135-199 3-81 (417)
469 3fpz_A Thiazole biosynthetic e 36.1 29 0.00098 28.0 3.6 31 135-165 66-98 (326)
470 2bv6_A MGRA, HTH-type transcri 36.0 28 0.00096 24.0 3.1 51 15-66 39-105 (142)
471 3hrs_A Metalloregulator SCAR; 35.9 40 0.0014 25.7 4.2 29 34-66 40-68 (214)
472 2f1k_A Prephenate dehydrogenas 35.9 62 0.0021 25.3 5.5 80 136-223 2-84 (279)
473 3e6m_A MARR family transcripti 35.6 25 0.00086 25.0 2.8 51 15-66 55-121 (161)
474 2b69_A UDP-glucuronate decarbo 35.5 88 0.003 25.0 6.5 64 134-198 27-98 (343)
475 3kp7_A Transcriptional regulat 35.4 26 0.00089 24.5 2.9 50 15-66 40-107 (151)
476 1zcj_A Peroxisomal bifunctiona 35.0 1.4E+02 0.0047 25.6 7.9 84 134-224 37-144 (463)
477 1xgk_A Nitrogen metabolite rep 35.0 43 0.0015 27.4 4.5 86 135-224 6-103 (352)
478 3kkj_A Amine oxidase, flavin-c 34.9 24 0.00084 26.2 2.8 30 136-165 4-33 (336)
479 2fbi_A Probable transcriptiona 34.8 21 0.00072 24.5 2.2 51 15-66 38-104 (142)
480 3c85_A Putative glutathione-re 34.4 1.1E+02 0.0038 21.9 6.4 62 134-198 39-112 (183)
481 4em8_A Ribose 5-phosphate isom 33.9 10 0.00035 27.6 0.4 47 139-185 68-116 (148)
482 4hbl_A Transcriptional regulat 33.6 25 0.00084 24.7 2.5 52 14-66 42-109 (149)
483 2nyx_A Probable transcriptiona 33.1 31 0.0011 24.8 3.0 51 15-66 47-113 (168)
484 2jt1_A PEFI protein; solution 33.1 30 0.001 21.9 2.6 31 18-48 9-58 (77)
485 2zcu_A Uncharacterized oxidore 32.6 31 0.001 26.9 3.1 80 141-224 5-95 (286)
486 3u2r_A Regulatory protein MARR 32.5 26 0.0009 25.1 2.5 52 15-66 48-116 (168)
487 1xn7_A Hypothetical protein YH 32.5 39 0.0013 21.5 3.0 29 18-47 7-49 (78)
488 3f3x_A Transcriptional regulat 32.4 29 0.00098 24.0 2.6 50 15-66 39-104 (144)
489 3tgn_A ADC operon repressor AD 32.3 46 0.0016 22.9 3.7 51 14-66 39-105 (146)
490 4h7p_A Malate dehydrogenase; s 32.1 39 0.0013 28.1 3.8 89 133-221 23-137 (345)
491 4hkt_A Inositol 2-dehydrogenas 32.1 47 0.0016 26.8 4.3 62 136-199 5-71 (331)
492 3c4a_A Probable tryptophan hyd 32.0 41 0.0014 27.7 4.0 30 136-165 2-33 (381)
493 3c24_A Putative oxidoreductase 31.8 45 0.0015 26.4 4.0 79 135-223 12-94 (286)
494 1m6i_A Programmed cell death p 31.8 41 0.0014 29.1 4.0 33 133-165 10-44 (493)
495 4g6h_A Rotenone-insensitive NA 31.7 35 0.0012 29.8 3.6 33 133-165 41-73 (502)
496 4aik_A Transcriptional regulat 31.6 77 0.0026 22.3 4.9 33 34-66 66-100 (151)
497 3jw4_A Transcriptional regulat 31.4 32 0.0011 23.9 2.8 52 15-66 43-111 (148)
498 4e12_A Diketoreductase; oxidor 31.3 33 0.0011 27.3 3.1 85 134-224 4-115 (283)
499 3c7a_A Octopine dehydrogenase; 31.2 45 0.0015 27.9 4.1 29 190-223 81-109 (404)
500 3g79_A NDP-N-acetyl-D-galactos 31.0 2.6E+02 0.0089 24.2 9.5 88 133-223 17-140 (478)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=3e-43 Score=302.86 Aligned_cols=219 Identities=21% Similarity=0.347 Sum_probs=190.8
Q ss_pred chhhHHHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhch-hhh
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASST-LLI 66 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~-~l~ 66 (228)
+||+.+++|++|+||||||+|.+.++|+|++| +||+|+++|+|++... ++.+.|++|+.++ +|.
T Consensus 17 ~Gf~~s~~L~aa~eLglfd~L~~~~~p~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~~~-~~~~~y~~t~~s~~~l~ 95 (353)
T 4a6d_A 17 NGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETR-GGKAFYRNTELSSDYLT 95 (353)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHSSSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEE-TTEEEEEECHHHHHHHS
T ss_pred HHHHHHHHHHHHHHcCHHHHHhcCCCCCCHHHHHHhhCcCHHHHHHHHHHHHHCCCEEEecc-CccceeeCCHHHHHHhh
Confidence 69999999999999999999998667999888 9999999999986531 1245799999987 666
Q ss_pred hCCCCC------------------hHHhhccCCCCccccccC---CChhhhcccCccHHHHHHHHHHhccchhHHHHHHH
Q 038208 67 KENPFS------------------LSSWFKGTELTLWGTVHG---IKFWEFLNQNPGINQRFNEAMASDSEIMTSFVVKA 125 (228)
Q Consensus 67 ~~~~~~------------------l~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~ 125 (228)
++++.+ |.+.++++. +++...+| .++|+++.++|+....|+++|........+.+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~vr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~aM~~~~~~~~~~~~~- 173 (353)
T 4a6d_A 96 TVSPTSQCSMLKYMGRTSYRCWGHLADAVREGR-NQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLT- 173 (353)
T ss_dssp TTSTTCCHHHHHHHHHTHHHHHTTHHHHHHHTS-CCHHHHHSCCCSSHHHHHTSSHHHHHHHHHHHHTTHHHHHHHHHH-
T ss_pred cCCchHHHHHHHHhCHHHHHHHHHHHHHHhcCC-ChhHHhcCCChHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 776654 455556665 56777776 4689999999999999999999988888888888
Q ss_pred hhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC------CCCeEEEeCCCCC-CCCCceEeeeh
Q 038208 126 ECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE------TDNLKYIAGDMFQ-FVPPADAFLFK 198 (228)
Q Consensus 126 ~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~------~~rv~~~~gD~~~-~~p~~D~v~~~ 198 (228)
.++ +++..+|||||||+|.++..+++++|+++++++|+|++++.+++ .+||+++.+||++ +.|++|+|+++
T Consensus 174 ~~~--~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~ 251 (353)
T 4a6d_A 174 AFD--LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILA 251 (353)
T ss_dssp SSC--GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEE
T ss_pred hcC--cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEee
Confidence 888 88889999999999999999999999999999999999987653 6899999999998 56789999999
Q ss_pred hhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++||+|+|+++.+||++++++|+|||.
T Consensus 252 ~vlh~~~d~~~~~iL~~~~~al~pgg~ 278 (353)
T 4a6d_A 252 RVLHDWADGKCSHLLERIYHTCKPGGG 278 (353)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHCCTTCE
T ss_pred eecccCCHHHHHHHHHHHHhhCCCCCE
Confidence 999999999999999999999999963
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=1.3e-39 Score=281.21 Aligned_cols=222 Identities=31% Similarity=0.528 Sum_probs=192.3
Q ss_pred CchhhHHHHHHHHHHcChhhHhhhCC-CCcCHHH-------------------HHHHHHhCCceeecccCC--C--CCeE
Q 038208 1 MFNHLSSMSLKCAIELSIADIIHCHG-RAITLSE-------------------LMRLLVHSGCFNKTKVNG--Q--EEAY 56 (228)
Q Consensus 1 ~~g~~~~~~L~~a~~lglfd~L~~~~-~p~t~~e-------------------ll~~L~~~g~l~~~~~~~--~--~~~~ 56 (228)
++||+.+++|++|+++||||+|+..+ +|+|++| +||+|++.|+|+++..++ + ++.|
T Consensus 28 ~~~~~~~~~l~~a~~Lgifd~L~~~g~~~~t~~eLA~~~g~~~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~g~~~~~y 107 (364)
T 3p9c_A 28 ASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTCLVEEGKDGRLSRSY 107 (364)
T ss_dssp TTTTHHHHHHHHHHHHTHHHHHHHTTTCCBCHHHHHHTTTCTTCTTHHHHHHHHHHHHHHTTSEEEEEEECSSSCEEEEE
T ss_pred HHhHHHHHHHHHHHHCChHHHHhhcCCCCCCHHHHHHhcCCCCCccchhhHHHHHHHHHhCCCEEEeccccCCCCcCCEE
Confidence 47999999999999999999999853 5887665 799999999999862100 0 2689
Q ss_pred eCChhchhhhhCC-CCC-------------------hHHhhccCCCCccccccCCChhhhcccCccHHHHHHHHHHhccc
Q 038208 57 GLTASSTLLIKEN-PFS-------------------LSSWFKGTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASDSE 116 (228)
Q Consensus 57 ~~t~~~~~l~~~~-~~~-------------------l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~ 116 (228)
++|+.++.|+.++ +.+ |.++++++. ++|+..+|.++|+|+.++|+..+.|+++|...+.
T Consensus 108 ~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~ 186 (364)
T 3p9c_A 108 GAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGG-IPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSI 186 (364)
T ss_dssp EECGGGGGSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ecCHHHHHHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCC-ChHHHhcCCCHHHHHHhCHHHHHHHHHHHHHhhH
Confidence 9999999887654 433 444555664 7898889999999999999999999999999887
Q ss_pred hhHHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCCCceEee
Q 038208 117 IMTSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETDNLKYIAGDMFQFVPPADAFL 196 (228)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~~~p~~D~v~ 196 (228)
.....+++ .++ .+++..+|||||||+|.++..+++++|+++++++|+|++++.+++.+||+++.+|+++++|..|+|+
T Consensus 187 ~~~~~~~~-~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~p~~D~v~ 264 (364)
T 3p9c_A 187 IITKKLLE-LYH-GFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTIL 264 (364)
T ss_dssp HHHHHHHH-HCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEE
T ss_pred HHHHHHHH-hcc-cccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCCCCCCCCEEE
Confidence 77777787 775 2667899999999999999999999999999999999999999988999999999999888679999
Q ss_pred ehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 197 FKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++||+|+|+++.++|++++++|+|||.
T Consensus 265 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~ 293 (364)
T 3p9c_A 265 MKWILHDWSDQHCATLLKNCYDALPAHGK 293 (364)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCTTCE
T ss_pred ehHHhccCCHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999999963
No 3
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=100.00 E-value=3.8e-39 Score=276.65 Aligned_cols=214 Identities=24% Similarity=0.428 Sum_probs=190.7
Q ss_pred CchhhHHHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhchhhh
Q 038208 1 MFNHLSSMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLI 66 (228)
Q Consensus 1 ~~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~ 66 (228)
++||+.+++|++|+++||||+|++ +|+|++| +||+|++.|+|++ . ++.|++|+.++.|+
T Consensus 30 ~~~~~~~~~l~~a~~lglf~~l~~--g~~t~~elA~~~g~~~~~l~rlLr~l~~~g~l~~-~----~~~y~~t~~s~~l~ 102 (348)
T 3lst_A 30 AMGYTYAAALRAAAAVGVADHLVD--GPRTPAELAAATGTDADALRRVLRLLAVRDVVRE-S----DGRFALTDKGAALR 102 (348)
T ss_dssp HTTHHHHHHHHHHHHHTGGGGGTT--SCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE-E----TTEEEECTTTGGGS
T ss_pred HHHHHHHHHHHHHHHcCchhHhhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHhCCCEEe-c----CCEEecCHHHHHHh
Confidence 368999999999999999999986 6999998 9999999999999 4 68999999999888
Q ss_pred hCCCCC-------------------hHHhhccCCCCccccccCCChhhhcccCccHHHHHHHHHHhccchhHHHHHHHhh
Q 038208 67 KENPFS-------------------LSSWFKGTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASDSEIMTSFVVKAEC 127 (228)
Q Consensus 67 ~~~~~~-------------------l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~ 127 (228)
++++.+ |+++++++. ++|+..+|.++|+|+.++|+..+.|.++|...+....+.+++ .+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~-~~ 180 (348)
T 3lst_A 103 SDSPVPARAGILMFTDTMFWTMSHRVASALGPER-PAFADIFGSSLDAYFDGDAEVEALYYEGMETVSAAEHLILAR-AG 180 (348)
T ss_dssp TTSSSCSHHHHHHHTSHHHHHHHHTHHHHTCTTC-CCHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHHTTHHHHHH-HS
T ss_pred cCCCccHHHHHHHhcCHHHHHHHHHHHHHHhcCC-ChhhHHhCCCHHHHHHhCHHHHHHHHHHHHHhhhhhHHHHHH-hC
Confidence 776543 445556664 678888899999999999999999999999988877788888 88
Q ss_pred hhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-----CCCeEEEeCCCCCCCCCceEeeehhhhc
Q 038208 128 KQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-----TDNLKYIAGDMFQFVPPADAFLFKLVFH 202 (228)
Q Consensus 128 ~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-----~~rv~~~~gD~~~~~p~~D~v~~~~vlh 202 (228)
+ +++..+|||||||+|.++..+++++|+++++++|+|.++...+. .+||+++.+|+++++|.||+|+++++||
T Consensus 181 ~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh 258 (348)
T 3lst_A 181 D--FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILH 258 (348)
T ss_dssp C--CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCCCSEEEEESCGG
T ss_pred C--ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCCCcEEEEehhcc
Confidence 7 78889999999999999999999999999999999888874321 5789999999998778999999999999
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+|+|+++.++|++++++|||||.
T Consensus 259 ~~~d~~~~~~L~~~~~~LkpgG~ 281 (348)
T 3lst_A 259 NWGDEDSVRILTNCRRVMPAHGR 281 (348)
T ss_dssp GSCHHHHHHHHHHHHHTCCTTCE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCE
Confidence 99999999999999999999963
No 4
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=6.3e-39 Score=277.33 Aligned_cols=221 Identities=31% Similarity=0.520 Sum_probs=190.7
Q ss_pred chhhHHHHHHHHHHcChhhHhhhC---CCCcCHHH------------------HHHHHHhCCceeecccC--CC--CCeE
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCH---GRAITLSE------------------LMRLLVHSGCFNKTKVN--GQ--EEAY 56 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~---~~p~t~~e------------------ll~~L~~~g~l~~~~~~--~~--~~~~ 56 (228)
+||+.+++|++|+++||||+|++. ++|+|++| +||+|++.|+|++...+ .+ +++|
T Consensus 30 ~~~~~~~~l~~a~~Lglfd~L~~~~gp~~~~t~~eLA~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~g~~~~~y 109 (368)
T 3reo_A 30 SAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLY 109 (368)
T ss_dssp TTTHHHHHHHHHHHTTHHHHHHHHCCTTCCBCHHHHHTTSSCCCTTHHHHHHHHHHHHHHTTSEEEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHHHHHCCchhHHhhcCCCCCCcCHHHHHHhcCcCCCcchhhHHHHHHHHHhCCCeEEecccCCCCccccee
Confidence 689999999999999999999883 24788777 89999999999986200 00 2689
Q ss_pred eCChhchhhhhCC-CCC-------------------hHHhhccCCCCccccccCCChhhhcccCccHHHHHHHHHHhccc
Q 038208 57 GLTASSTLLIKEN-PFS-------------------LSSWFKGTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASDSE 116 (228)
Q Consensus 57 ~~t~~~~~l~~~~-~~~-------------------l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~ 116 (228)
++|+.++.|+.+. +.+ |.++++++. ++|+..+|.++|+|+.++|+..+.|+++|...+.
T Consensus 110 ~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~ 188 (368)
T 3reo_A 110 GLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGG-IPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNST 188 (368)
T ss_dssp EECTTHHHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCS-CHHHHHSSSCHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCC-CHHHHHhCCCHHHHHhhCHHHHHHHHHHHHhhhh
Confidence 9999999877653 443 444455554 7888889999999999999999999999999887
Q ss_pred hhHHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCCCceEee
Q 038208 117 IMTSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETDNLKYIAGDMFQFVPPADAFL 196 (228)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~~~p~~D~v~ 196 (228)
.....+++ .++ .+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++.++|+++.+|+++++|..|+|+
T Consensus 189 ~~~~~~~~-~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~ 266 (368)
T 3reo_A 189 ITMKKILE-MYN-GFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIF 266 (368)
T ss_dssp HHHHHHHT-TCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEE
T ss_pred hHHHHHHH-hcc-cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCCCCCCCCEEE
Confidence 77777777 665 2567899999999999999999999999999999999999999888899999999998888679999
Q ss_pred ehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 197 FKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++||+|+++++.++|++++++|+|||.
T Consensus 267 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~ 295 (368)
T 3reo_A 267 IKWICHDWSDEHCLKLLKNCYAALPDHGK 295 (368)
T ss_dssp EESCGGGBCHHHHHHHHHHHHHHSCTTCE
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999999973
No 5
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=100.00 E-value=4.5e-39 Score=274.31 Aligned_cols=215 Identities=27% Similarity=0.442 Sum_probs=188.7
Q ss_pred CchhhHHHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhchhhh
Q 038208 1 MFNHLSSMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLI 66 (228)
Q Consensus 1 ~~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~ 66 (228)
++||+.+++|++|+++||||+|++ +|+|++| +||+|++.|+++++. ++.|.+|+.++.|.
T Consensus 13 ~~g~~~~~~l~~a~~lglf~~l~~--g~~t~~elA~~~~~~~~~l~rlLr~l~~~gl~~~~~----~~~y~~t~~s~~l~ 86 (332)
T 3i53_A 13 LADLATPMAVRVAATLRVADHIAA--GHRTAAEIASAAGAHADSLDRLLRHLVAVGLFTRDG----QGVYGLTEFGEQLR 86 (332)
T ss_dssp HTCCHHHHHHHHHHHHTHHHHHHT--TCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECT----TSBEEECTTGGGGS
T ss_pred HHhhHHHHHHHHHHHcChHHHHhc--CCCCHHHHHHHHCcCHHHHHHHHHHHHhCCcEEecC----CCeEEcCHhHHHHh
Confidence 379999999999999999999986 6999998 999999999999976 68999999999887
Q ss_pred hCCCCC--------------------hHHhhccCCCCccccccCCChhhhcccCccHHHHHHHHHHhccchhHHHHHHHh
Q 038208 67 KENPFS--------------------LSSWFKGTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASDSEIMTSFVVKAE 126 (228)
Q Consensus 67 ~~~~~~--------------------l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~ 126 (228)
++++.+ |+++++++. ++|+..+|.++|+|+.++|+..+.|.+.|...+....+.+++ .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~-~ 164 (332)
T 3i53_A 87 DDHAAGKRKWLDMNSAVGRGDLGFVELAHSIRTGQ-PAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGIAA-K 164 (332)
T ss_dssp TTCTTCCHHHHCTTSHHHHHGGGGGGHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHTTGGG-S
T ss_pred cCCchhHHHHHHHcCCHhHHHHHHHHhHHHHhcCC-CHHHHhhCCCHHHHHHhCHHHHHHHHHHHHHhHHhhHHHHHH-h
Confidence 776643 223334443 677778888999999999999999999999887766666667 6
Q ss_pred hhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCCCC-CceEeeeh
Q 038208 127 CKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQFVP-PADAFLFK 198 (228)
Q Consensus 127 ~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~~~p-~~D~v~~~ 198 (228)
++ +++..+|||||||+|.++..+++++|+.+++++|+|.+++.+++ .+||+++.+|+++++| +||+|+++
T Consensus 165 ~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~ 242 (332)
T 3i53_A 165 YD--WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLS 242 (332)
T ss_dssp SC--CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEE
T ss_pred CC--CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEe
Confidence 66 67789999999999999999999999999999999999988763 4789999999998888 69999999
Q ss_pred hhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++||+|+|+++.++|++++++|+|||.
T Consensus 243 ~vlh~~~~~~~~~~l~~~~~~L~pgG~ 269 (332)
T 3i53_A 243 AVLHDWDDLSAVAILRRCAEAAGSGGV 269 (332)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHTTTCE
T ss_pred hhhccCCHHHHHHHHHHHHHhcCCCCE
Confidence 999999999999999999999999963
No 6
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=100.00 E-value=2e-38 Score=274.26 Aligned_cols=214 Identities=28% Similarity=0.533 Sum_probs=191.2
Q ss_pred chhhHHHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCe-EeCChhchhhh
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEA-YGLTASSTLLI 66 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~-~~~t~~~~~l~ 66 (228)
+||+.+++|++|+++||||+|++ +|+|++| +||+|++.|+|++.+ ++. |++|+.++.|.
T Consensus 47 ~~~~~~~~l~~a~~lglf~~l~~--g~~t~~eLA~~~g~~~~~l~rlLr~L~~~g~l~~~~----~~~~y~~t~~s~~L~ 120 (369)
T 3gwz_A 47 QGAWKARAIHVAVELGVPELLQE--GPRTATALAEATGAHEQTLRRLLRLLATVGVFDDLG----HDDLFAQNALSAVLL 120 (369)
T ss_dssp HHHHHHHHHHHHHHHTTGGGGTT--SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSSEECS----STTEEECCHHHHTTS
T ss_pred HHHHHHHHHHHHHHCChhhhhcC--CCCCHHHHHHHHCcCHHHHHHHHHHHHhCCCEEEeC----CCceEecCHHHHHHh
Confidence 68999999999999999999996 7999998 999999999999976 678 99999999888
Q ss_pred hCCCCC-------------------hHHhhccCCCCccccccCCChhhhcccCccHHHHHHHHHHhccchhHHHHHHHhh
Q 038208 67 KENPFS-------------------LSSWFKGTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASDSEIMTSFVVKAEC 127 (228)
Q Consensus 67 ~~~~~~-------------------l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~ 127 (228)
++++.+ |.++++++. ++|...+|.++|+|+.++|+..+.|+++|........+.+++ .+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~-~~ 198 (369)
T 3gwz_A 121 PDPASPVATDARFQAAPWHWRAWEQLTHSVRTGE-ASFDVANGTSFWQLTHEDPKARELFNRAMGSVSLTEAGQVAA-AY 198 (369)
T ss_dssp CCTTCHHHHHHHHHHSHHHHHHHHTHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH-HS
T ss_pred cCCchhHHHHHHHcCCHHHHHHHHhHHHHHhCCC-ChhHhhcCCCHHHHHHhCHHHHHHHHHHHHHHHhhhHHHHHH-hC
Confidence 776643 334445554 678888898999999999999999999999988877788888 77
Q ss_pred hhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCCCC-CceEeeehh
Q 038208 128 KQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQFVP-PADAFLFKL 199 (228)
Q Consensus 128 ~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~~~p-~~D~v~~~~ 199 (228)
+ +++..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+||+++.+|+++++| +||+|++++
T Consensus 199 ~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~ 276 (369)
T 3gwz_A 199 D--FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKH 276 (369)
T ss_dssp C--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEEES
T ss_pred C--CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEhhh
Confidence 7 77889999999999999999999999999999999999987764 4789999999998888 699999999
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+||+|+|+++.++|++++++|+|||.
T Consensus 277 vlh~~~d~~~~~~L~~~~~~L~pgG~ 302 (369)
T 3gwz_A 277 VLHDWDDDDVVRILRRIATAMKPDSR 302 (369)
T ss_dssp CGGGSCHHHHHHHHHHHHTTCCTTCE
T ss_pred hhccCCHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999963
No 7
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=100.00 E-value=9.6e-38 Score=268.22 Aligned_cols=219 Identities=47% Similarity=0.867 Sum_probs=191.6
Q ss_pred chhhHHHHHHHHHHcChhhHhhhCCCCcCHHH-----------------HHHHHHhCCceeecccCCCCCeEeCChhchh
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCHGRAITLSE-----------------LMRLLVHSGCFNKTKVNGQEEAYGLTASSTL 64 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e-----------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~ 64 (228)
+||+.+++|++|+++||||+|+..++|+|++| +||+|++.|+|++.. .+++.|++|+.++.
T Consensus 25 ~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~ela~~~~~~~~~~~~l~rlLr~L~~~gll~~~~--~~~~~y~~t~~s~~ 102 (352)
T 1fp2_A 25 YAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEIIT--KEEESYALTVASEL 102 (352)
T ss_dssp TTHHHHHHHHHHHHTTHHHHHHHHTSCEEHHHHHHHHTCCGGGHHHHHHHHHHHHHTTSEEEEE--SSSEEEEECHHHHT
T ss_pred HHHHHHHHHHHHHHCChhhhhhhcCCCccHHHHHHHhCcCCCChHHHHHHHHHHHhCCeEEEec--CCCCeEeCCHHHHH
Confidence 58999999999999999999997535888887 899999999999871 00589999999998
Q ss_pred hhhCCCCC-------------------hHHhhc-cCCCCccccccCCChhhhcccCccHHHHHHHHHHhccchhHHHHHH
Q 038208 65 LIKENPFS-------------------LSSWFK-GTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASDSEIMTSFVVK 124 (228)
Q Consensus 65 l~~~~~~~-------------------l~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~ 124 (228)
|+++++.+ |+++++ ++ .++|+..+|.++|+|+.++|+..+.|.+.|........+. ++
T Consensus 103 L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~-~~ 180 (352)
T 1fp2_A 103 LVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEED-LTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLA-LR 180 (352)
T ss_dssp TSTTSSSCCHHHHHHHTCHHHHHGGGGHHHHHTCSS-CCHHHHHHSSCHHHHHHHCHHHHHHHHHHHHHTHHHHHHH-HH
T ss_pred HhCCCCccHHHHHHHhcCchHHHHHHHHHHHHHhcC-CChHHHHcCCCHHHHHHhChHHHHHHHHHHHhcchhhhhH-HH
Confidence 88776533 556666 44 4788888899999999999999999999999888776666 77
Q ss_pred HhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCCCceEeeehhhhcCC
Q 038208 125 AECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETDNLKYIAGDMFQFVPPADAFLFKLVFHGL 204 (228)
Q Consensus 125 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~~~p~~D~v~~~~vlh~~ 204 (228)
.+++.+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++.++|+++.+|+++++|.||+|+++++||+|
T Consensus 181 -~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~~lh~~ 259 (352)
T 1fp2_A 181 -DCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNW 259 (352)
T ss_dssp -TCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTTCCCCCSEEEEESCGGGS
T ss_pred -hcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccCCCCCccEEEeehhhccC
Confidence 7732377889999999999999999999999999999999999999987677999999998888889999999999999
Q ss_pred ChhHHHHHHHHHHHHhcc---CCC
Q 038208 205 GDEDGLKILKKRREAIAS---NGE 225 (228)
Q Consensus 205 ~d~~~~~il~~~~~aL~p---gG~ 225 (228)
+|+++.++|++++++|+| ||.
T Consensus 260 ~d~~~~~~l~~~~~~L~p~~~gG~ 283 (352)
T 1fp2_A 260 TDKDCLRILKKCKEAVTNDGKRGK 283 (352)
T ss_dssp CHHHHHHHHHHHHHHHSGGGCCCE
T ss_pred CHHHHHHHHHHHHHhCCCCCCCcE
Confidence 999999999999999999 863
No 8
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=100.00 E-value=1.6e-37 Score=267.40 Aligned_cols=221 Identities=50% Similarity=0.860 Sum_probs=191.0
Q ss_pred chhhHHHHHHHHHHcChhhHhhhCCCCcCHHH-----------------HHHHHHhCCceeec-----c-cCCCCCeEeC
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCHGRAITLSE-----------------LMRLLVHSGCFNKT-----K-VNGQEEAYGL 58 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e-----------------ll~~L~~~g~l~~~-----~-~~~~~~~~~~ 58 (228)
+||+.+++|++|+++||||+|+..++|+|++| +||+|++.|+|++. + .+..++.|++
T Consensus 19 ~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~~~g~~~~~y~~ 98 (358)
T 1zg3_A 19 YNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSL 98 (358)
T ss_dssp TTHHHHHHHHHHHHHTHHHHHHHHTSCEEHHHHHHHTTCCTTTHHHHHHHHHHHHHTTSEEEEEECCSSSSCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHCChHhHHhhcCCCcCHHHHHHhcCCCCcchHHHHHHHHHHhhCCcEEEecccccccCCCCCCEEeC
Confidence 58999999999999999999997535888877 89999999999987 1 0000278999
Q ss_pred ChhchhhhhCCCCC-------------------hHHhhccCC-CCccccccCCChhhhcccCccHHH--HHHHHHHhccc
Q 038208 59 TASSTLLIKENPFS-------------------LSSWFKGTE-LTLWGTVHGIKFWEFLNQNPGINQ--RFNEAMASDSE 116 (228)
Q Consensus 59 t~~~~~l~~~~~~~-------------------l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~--~f~~~m~~~~~ 116 (228)
|+.++.|+++++.+ |+++++++. .++|+.++|.++|+|+.++|+..+ .|++.|...+.
T Consensus 99 t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~~g~~~~~~~~~~p~~~~~~~f~~~m~~~~~ 178 (358)
T 1zg3_A 99 TPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSR 178 (358)
T ss_dssp CHHHHTTCTTSTTCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHHHSSCHHHHHTSGGGHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhCCCCccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHHhCCCHHHHHhcChhhhhHHHHHHHHhcccH
Confidence 99999888776533 556666663 367888889999999999999999 99999998777
Q ss_pred hhHHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCCCceEee
Q 038208 117 IMTSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETDNLKYIAGDMFQFVPPADAFL 196 (228)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~~~p~~D~v~ 196 (228)
... .+++ .+++.+.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++.++|+++.+|+++++|.+|+|+
T Consensus 179 ~~~-~~~~-~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~ 256 (358)
T 1zg3_A 179 MFK-LVLQ-ENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVL 256 (358)
T ss_dssp THH-HHHH-HTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTTCCCCCSEEE
T ss_pred HHH-HHHH-hcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCCCCCCceEEE
Confidence 655 6777 77323677899999999999999999999999999999999999998876779999999998888899999
Q ss_pred ehhhhcCCChhHHHHHHHHHHHHhcc---CC
Q 038208 197 FKLVFHGLGDEDGLKILKKRREAIAS---NG 224 (228)
Q Consensus 197 ~~~vlh~~~d~~~~~il~~~~~aL~p---gG 224 (228)
++++||+|+|+++.++|++++++|+| ||
T Consensus 257 ~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG 287 (358)
T 1zg3_A 257 LKWVLHDWNDEQSLKILKNSKEAISHKGKDG 287 (358)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHTGGGGGGC
T ss_pred EcccccCCCHHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999 86
No 9
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=100.00 E-value=2.4e-36 Score=261.33 Aligned_cols=222 Identities=31% Similarity=0.521 Sum_probs=178.1
Q ss_pred chhhHHHHHHHHHHcChhhHhhhCCCC---cCHHH--------------------HHHHHHhCCceeec----ccCCCCC
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCHGRA---ITLSE--------------------LMRLLVHSGCFNKT----KVNGQEE 54 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~~~p---~t~~e--------------------ll~~L~~~g~l~~~----~~~~~~~ 54 (228)
+||+.+++|++|+++||||+|+..++| +|++| +||+|++.|+|++. +.+..++
T Consensus 33 ~~~~~~~~l~~a~~lgif~~L~~~g~pg~~~t~~eLA~~~~~~~~~~~~~~~l~rlLr~L~~~gll~~~~~~~~~g~~~~ 112 (372)
T 1fp1_D 33 TNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAER 112 (372)
T ss_dssp HTTHHHHHHHHHHHTTHHHHHHTCSSTTCCBCHHHHHTTSCGGGCCTTHHHHHHHHHHHHHHTTSEEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHHHHHCChHHHHHhcCCCCCCcCHHHHHHhcCCCCCCCcChHHHHHHHHHHhhCCceEecccccCCCCcCC
Confidence 589999999999999999999974225 76544 79999999999987 2000025
Q ss_pred eEeCChhchhhhhCCC-CC-------------------hHHhhccCCCCccccccCCChhhhcccCccHHHHHHHHHHhc
Q 038208 55 AYGLTASSTLLIKENP-FS-------------------LSSWFKGTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASD 114 (228)
Q Consensus 55 ~~~~t~~~~~l~~~~~-~~-------------------l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~ 114 (228)
.|++|+.++.|+++++ .+ |+++++++..++|+..+|.++|+|+.++|+..+.|++.|...
T Consensus 113 ~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~ 192 (372)
T 1fp1_D 113 VYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDV 192 (372)
T ss_dssp EEEECTTGGGGSTTCTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC--------------CCSSCHHHHHHHHHHHHHH
T ss_pred eEecCHHHHHHhCCCCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCCChhHHHhCCCHHHHHHhCHHHHHHHHHHHHhh
Confidence 8999999998887765 22 556667663378888889999999999999999999999988
Q ss_pred cchhHHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCCCceE
Q 038208 115 SEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETDNLKYIAGDMFQFVPPADA 194 (228)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~~~p~~D~ 194 (228)
+....+.+++ .++ .+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++.++|+++.+|+++++|.+|+
T Consensus 193 ~~~~~~~l~~-~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~ 270 (372)
T 1fp1_D 193 CATEMKRMLE-IYT-GFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDA 270 (372)
T ss_dssp HHHHHHHHHH-HCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCEEE
T ss_pred hHHHHHHHHH-Hhh-ccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCcccCCCCCCE
Confidence 7776777777 764 25678899999999999999999999999999999999999998778899999999988888999
Q ss_pred eeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 195 FLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 195 v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|+++++||+|+|+++.++|++++++|+|||.
T Consensus 271 v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~ 301 (372)
T 1fp1_D 271 MILKAVCHNWSDEKCIEFLSNCHKALSPNGK 301 (372)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred EEEecccccCCHHHHHHHHHHHHHhcCCCCE
Confidence 9999999999999999999999999999963
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7.3e-37 Score=260.67 Aligned_cols=211 Identities=28% Similarity=0.423 Sum_probs=186.1
Q ss_pred chhhHHHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhchhhhh
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLIK 67 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~~ 67 (228)
+||+.+++|++++++||||+|.+ +|+|++| +||+|++.|+|++.+ ++.|++|+.++.|+
T Consensus 17 ~~~~~~~~l~~~~~lgi~~~l~~--~~~t~~ela~~~~~~~~~l~r~Lr~L~~~g~l~~~~----~~~y~~t~~s~~l~- 89 (334)
T 2ip2_A 17 TGEWKSRCVYVATRLGLADLIES--GIDSDETLAAAVGSDAERIHRLMRLLVAFEIFQGDT----RDGYANTPTSHLLR- 89 (334)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHT--TCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET----TTEEEECHHHHTTS-
T ss_pred HHHHHHHHHHHHHHcCcHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHhCCceEecC----CCeEecCHHHHHHh-
Confidence 58999999999999999999986 6999998 999999999999985 58999999999887
Q ss_pred CCCCC------------------hHHhhccCCCCccccccCCChhhhcccCccHHHHHHHHHHhccchhHHHHHHHhhhh
Q 038208 68 ENPFS------------------LSSWFKGTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASDSEIMTSFVVKAECKQ 129 (228)
Q Consensus 68 ~~~~~------------------l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~ 129 (228)
+++.+ |+++++++. ++|+..+|.++|+|+.++|+..+.|++.| ..+....+.+++ .++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m-~~~~~~~~~~~~-~~~- 165 (334)
T 2ip2_A 90 DVEGSFRDMVLFYGEEFHAAWTPACEALLSGT-PGFELAFGEDFYSYLKRCPDAGRRFLLAM-KASNLAFHEIPR-LLD- 165 (334)
T ss_dssp SSTTCSHHHHHHHTTHHHHHTTTHHHHHHHCC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHH-GGGHHHHHHHHH-HSC-
T ss_pred CCCccHHHHHHHhcCchhhHHHHHHHHHhcCC-ChhhhhcCCCHHHHHhhChHHHHHHHHHH-HHHHHHHHHHHH-hCC-
Confidence 65533 445555554 67877788999999999999999999999 877776777787 776
Q ss_pred hccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCCCCC-ceEeeehhhh
Q 038208 130 IFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQFVPP-ADAFLFKLVF 201 (228)
Q Consensus 130 ~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~~~p~-~D~v~~~~vl 201 (228)
+++ .+|||||||+|.++..+++++|+.+++++|+|.+++.+++ .+||+++.+|+++++|+ ||+|++++++
T Consensus 166 -~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl 243 (334)
T 2ip2_A 166 -FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRII 243 (334)
T ss_dssp -CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEEEESCG
T ss_pred -CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEEEchhc
Confidence 666 9999999999999999999999999999999888887764 47899999999987775 9999999999
Q ss_pred cCCChhHHHHHHHHHHHHhccCCC
Q 038208 202 HGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|+|+++++.++|++++++|+|||.
T Consensus 244 ~~~~~~~~~~~l~~~~~~L~pgG~ 267 (334)
T 2ip2_A 244 GDLDEAASLRLLGNCREAMAGDGR 267 (334)
T ss_dssp GGCCHHHHHHHHHHHHHHSCTTCE
T ss_pred cCCCHHHHHHHHHHHHHhcCCCCE
Confidence 999999999999999999999973
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=100.00 E-value=6.3e-37 Score=264.28 Aligned_cols=212 Identities=17% Similarity=0.265 Sum_probs=179.3
Q ss_pred chhhHHHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhchhhhh
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLIK 67 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~~ 67 (228)
+|++.+++|++++++||||+|+..++|+|++| +||+|++.|+|+++ ++.|++|+.+++|++
T Consensus 24 ~g~~~~~~l~~a~~lgifd~L~~~~~~~t~~eLA~~~g~~~~~l~rlLr~l~~~g~l~~~-----~~~y~~t~~s~~L~~ 98 (363)
T 3dp7_A 24 FGPVVFQVSRLMLKFGIFQLLSGKREGYTLQEISGRTGLTRYAAQVLLEASLTIGTILLE-----EDRYVLAKAGWFLLN 98 (363)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHTCTTCBCHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEE-----TTEEEECHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhCHHHHHHhcCCCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCeEec-----CCEEecccchHHhhC
Confidence 68999999999999999999998447999998 99999999999986 589999999998887
Q ss_pred CCCC----------------ChHHhhccCCCCccccccC--CChhhhcccCccHHHH----HHHHHHhccchhHHHHHHH
Q 038208 68 ENPF----------------SLSSWFKGTELTLWGTVHG--IKFWEFLNQNPGINQR----FNEAMASDSEIMTSFVVKA 125 (228)
Q Consensus 68 ~~~~----------------~l~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~----f~~~m~~~~~~~~~~~~~~ 125 (228)
+++. .|+++++++. .++...+| .++|+++.++|+..+. |+..|.... ...++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~---~~~~l~- 173 (363)
T 3dp7_A 99 DKMARVNMEFNHDVNYQGLFHLEEALLNGR-PEGLKVFGEWPTIYEGLSQLPEQVQKSWFGFDHFYSDQS---FGKALE- 173 (363)
T ss_dssp CHHHHHHHHHHHHTTHHHHTTHHHHHHHSS-CGGGGGTCCCSSHHHHGGGSCHHHHHHHHHHHHHTTCCC---CHHHHH-
T ss_pred CCcccchheeecHHhhhhHHHHHHHHhcCC-CccccccCchHhHHHHHhhCHHHHHHHHHHHHHHhhhhh---HHHHHH-
Confidence 6542 2777888876 45666777 6899999999987763 555555433 233455
Q ss_pred hhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCC---CC-CceE
Q 038208 126 ECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQF---VP-PADA 194 (228)
Q Consensus 126 ~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~~---~p-~~D~ 194 (228)
.+. ..+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+||+++.+|++++ +| +||+
T Consensus 174 ~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~ 251 (363)
T 3dp7_A 174 IVF--SHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDA 251 (363)
T ss_dssp HHG--GGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSE
T ss_pred Hhc--ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCE
Confidence 443 35678999999999999999999999999999999999987764 36899999999984 67 5999
Q ss_pred eeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 195 FLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 195 v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|+++++||+|+++++.++|++++++|+|||.
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~ 282 (363)
T 3dp7_A 252 VWMSQFLDCFSEEEVISILTRVAQSIGKDSK 282 (363)
T ss_dssp EEEESCSTTSCHHHHHHHHHHHHHHCCTTCE
T ss_pred EEEechhhhCCHHHHHHHHHHHHHhcCCCcE
Confidence 9999999999999999999999999999973
No 12
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=100.00 E-value=1.6e-34 Score=249.62 Aligned_cols=214 Identities=25% Similarity=0.429 Sum_probs=185.5
Q ss_pred CchhhHHHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCC--eEeCChhchh
Q 038208 1 MFNHLSSMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEE--AYGLTASSTL 64 (228)
Q Consensus 1 ~~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~--~~~~t~~~~~ 64 (228)
++||+.+++|++++++||||+|.. +|+|++| +||+|++.|+|++.. ++ .|++|+.++.
T Consensus 24 ~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~eLA~~~g~~~~~l~r~Lr~L~~~Gll~~~~----~~~~~y~~t~~s~~ 97 (374)
T 1qzz_A 24 LGNLVTPMALRVAATLRLVDHLLA--GADTLAGLADRTDTHPQALSRLVRHLTVVGVLEGGE----KQGRPLRPTRLGML 97 (374)
T ss_dssp TTCCHHHHHHHHHHHTTHHHHHHT--TCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEECCC----C-CCCCEECTTGGG
T ss_pred HHhhHHHHHHHHHHHcChHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCEEEeC----CCCeEEEEChHHHh
Confidence 468999999999999999999965 7999998 999999999999865 56 8999999998
Q ss_pred hhhCCCCChHHh--------------------hccCCCCccccccCCChhhhcccCccHHHHHHHHHHhccchhHHHHHH
Q 038208 65 LIKENPFSLSSW--------------------FKGTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASDSEIMTSFVVK 124 (228)
Q Consensus 65 l~~~~~~~l~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~ 124 (228)
|+++++.++..+ ++++. +++...+|.++|+++..+|+..+.|.+.|........+.+++
T Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 176 (374)
T 1qzz_A 98 LADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGR-PAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPAD 176 (374)
T ss_dssp GSTTCTTCHHHHHCTTSHHHHHHGGGGGHHHHHHHSC-CSHHHHHSSCHHHHHHHCHHHHHHHHHTCGGGSTTTTHHHHH
T ss_pred hcCCCcccHHHHHHHcCChhhHHHHHHHHHHHHhcCC-ChhhhhhCCCHHHHHhhChHHHHHHHHHHHHhhHhHHHHHHH
Confidence 888776543322 23343 566667788999999999999999999999887777777888
Q ss_pred HhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCCCCC-ceEee
Q 038208 125 AECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQFVPP-ADAFL 196 (228)
Q Consensus 125 ~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~~~p~-~D~v~ 196 (228)
.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .++|+++.+|+++++|. ||+|+
T Consensus 177 -~~~--~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~ 253 (374)
T 1qzz_A 177 -AYD--WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVL 253 (374)
T ss_dssp -TSC--CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEE
T ss_pred -hCC--CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEE
Confidence 776 67788999999999999999999999999999999888887764 35899999999887775 99999
Q ss_pred ehhhhcCCChhHHHHHHHHHHHHhccCC
Q 038208 197 FKLVFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 197 ~~~vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
+++++|+|+++++.++|++++++|+|||
T Consensus 254 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG 281 (374)
T 1qzz_A 254 LSFVLLNWSDEDALTILRGCVRALEPGG 281 (374)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred EeccccCCCHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999997
No 13
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=100.00 E-value=4.2e-34 Score=245.90 Aligned_cols=213 Identities=25% Similarity=0.439 Sum_probs=185.7
Q ss_pred chhhHHHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhchhhhh
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLIK 67 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~~ 67 (228)
+||+.+++|.+++++|||+.|.. +|+|++| +||+|++.|+|++.. ++.|++|+.++.|++
T Consensus 28 ~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~~~~~~----~g~y~~t~~s~~l~~ 101 (360)
T 1tw3_A 28 GSLHTPMVVRTAATLRLVDHILA--GARTVKALAARTDTRPEALLRLIRHLVAIGLLEEDA----PGEFVPTEVGELLAD 101 (360)
T ss_dssp HCSHHHHHHHHHHHTTHHHHHHT--TCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE----TTEEEECTTGGGGST
T ss_pred HhHHHHHHHHHHHHhCHHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCEEecC----CCeEEeCHHHHHHhc
Confidence 58999999999999999999975 7999988 999999999999965 689999999999988
Q ss_pred CCCCChHH--------------------hhccCCCCccccccCCChhhhcccCccHHHHHHHHHHhccchhHHHHHHHhh
Q 038208 68 ENPFSLSS--------------------WFKGTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASDSEIMTSFVVKAEC 127 (228)
Q Consensus 68 ~~~~~l~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~ 127 (228)
+++.++.. +++++. ++++..+|.++|+++..+|+..+.|...|........+.+++ .+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~p~~~~~f~~~~~~~~~~~~~~l~~-~~ 179 (360)
T 1tw3_A 102 DHPAAQRAWHDLTQAVARADISFTRLPDAIRTGR-PTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAA-AY 179 (360)
T ss_dssp TSTTCHHHHTCTTSHHHHHGGGGGGHHHHHHHCC-CCHHHHHSSCHHHHHHTCHHHHHHHHHHHTTTTTTTTHHHHH-HS
T ss_pred CCchhHHHHHHHhcCchhHHHHHHHHHHHHHcCC-CHHHHhcCCCHHHHHHhChHHHHHHHHHHHHHHHHhHHHHHH-hC
Confidence 77654332 223343 456667788999999999999999999999888777777888 77
Q ss_pred hhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCCCCC-ceEeeehh
Q 038208 128 KQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQFVPP-ADAFLFKL 199 (228)
Q Consensus 128 ~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~~~p~-~D~v~~~~ 199 (228)
+ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .++++++.+|+++++|. ||+|++++
T Consensus 180 ~--~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~ 257 (360)
T 1tw3_A 180 D--WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSF 257 (360)
T ss_dssp C--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEES
T ss_pred C--CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEcc
Confidence 6 67788999999999999999999999999999999888887653 35899999999987775 99999999
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
++|+|+++++.++|++++++|+|||
T Consensus 258 vl~~~~~~~~~~~l~~~~~~L~pgG 282 (360)
T 1tw3_A 258 VLLNWPDHDAVRILTRCAEALEPGG 282 (360)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999997
No 14
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=100.00 E-value=1.6e-33 Score=242.51 Aligned_cols=213 Identities=22% Similarity=0.313 Sum_probs=177.8
Q ss_pred chhhHHHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhc-hhhh
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASS-TLLI 66 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~-~~l~ 66 (228)
+||+.+++|++++++||||.|+. +|+|++| +||+|++.|+|+++ ++.|++|+.+ .+|.
T Consensus 40 ~~~~~~~~l~~a~~lgif~~L~~--~~~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~-----~~~y~~t~~~~~~l~ 112 (359)
T 1x19_A 40 KGLIEFSCMKAAIELDLFSHMAE--GPKDLATLAADTGSVPPRLEMLLETLRQMRVINLE-----DGKWSLTEFADYMFS 112 (359)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHTT--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE-----TTEEEECHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCcHHHHcC--CCCCHHHHHHHhCcChHHHHHHHHHHHhCCCeEee-----CCeEecCHHHHHHhc
Confidence 48999999999999999999987 6999998 99999999999998 4799999964 5777
Q ss_pred hCCC---CChHHhhccCC----C--Ccc--ccccCCChhhhcccCcc---HHHHHHHHHHhccc-hhHHHHHHHhhhhhc
Q 038208 67 KENP---FSLSSWFKGTE----L--TLW--GTVHGIKFWEFLNQNPG---INQRFNEAMASDSE-IMTSFVVKAECKQIF 131 (228)
Q Consensus 67 ~~~~---~~l~~~~~~~~----~--~~~--~~~~g~~~~~~~~~~~~---~~~~f~~~m~~~~~-~~~~~~~~~~~~~~~ 131 (228)
++++ .++..++.... + ..+ ....|.+ |+|+.++|+ ..+.|.+.|..... ...+.+++ .++ +
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~-~~~~~~~p~~~~~~~~f~~~m~~~~~~~~~~~l~~-~~~--~ 188 (359)
T 1x19_A 113 PTPKEPNLHQTPVAKAMAFLADDFYMGLSQAVRGQKN-FKGQVPYPPVTREDNLYFEEIHRSNAKFAIQLLLE-EAK--L 188 (359)
T ss_dssp SSCSBTTBCCHHHHHHHHHHHHHTGGGHHHHHTTSCC-CCCSSCSSCCSHHHHHHHHHHHHTTCHHHHHHHHH-HCC--C
T ss_pred CCCCCccccHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CcccccCchhhHHHHHHHHHHHHhccchhHHHHHH-hcC--C
Confidence 7777 55443332100 0 000 0112334 788889999 99999999999888 77777888 776 6
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCCCceEeeehhhhcC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQ-FVPPADAFLFKLVFHG 203 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~-~~p~~D~v~~~~vlh~ 203 (228)
.+..+|||||||+|.++..+++++|+.+++++|+|.+++.+++ .+||+++.+|+++ +++++|+|++++++|+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vlh~ 268 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYS 268 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGGG
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechhcc
Confidence 7789999999999999999999999999999999988887763 4579999999998 6677899999999999
Q ss_pred CChhHHHHHHHHHHHHhccCCC
Q 038208 204 LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|+|+++.++|++++++|+|||.
T Consensus 269 ~~d~~~~~~l~~~~~~L~pgG~ 290 (359)
T 1x19_A 269 ANEQLSTIMCKKAFDAMRSGGR 290 (359)
T ss_dssp SCHHHHHHHHHHHHTTCCTTCE
T ss_pred CCHHHHHHHHHHHHHhcCCCCE
Confidence 9999999999999999999974
No 15
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=100.00 E-value=2.8e-33 Score=240.07 Aligned_cols=206 Identities=17% Similarity=0.242 Sum_probs=169.5
Q ss_pred chhhHHHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhch-hhh
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASST-LLI 66 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~-~l~ 66 (228)
+||+.+++|++|+++||||+|.. |+|++| +||+|++.|+|++. ++.|.+|+.++ +|.
T Consensus 33 ~~~~~~~~l~~a~~lgif~~l~~---~~t~~elA~~~~~~~~~l~rlLr~L~~~gll~~~-----~~~y~~t~~s~~~l~ 104 (352)
T 3mcz_A 33 DQYRQSAILHYAVADKLFDLTQT---GRTPAEVAASFGMVEGKAAILLHALAALGLLTKE-----GDAFRNTALTERYLT 104 (352)
T ss_dssp HTHHHHHHHHHHHHTTHHHHTTS---CBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE-----TTEEEECHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCChHHHhCC---CCCHHHHHHHhCcChHHHHHHHHHHHHCCCeEec-----CCeeecCHHHHhhcc
Confidence 58999999999999999999963 899988 99999999999998 47899999997 666
Q ss_pred hCCCCC-----------------hHHhhccCCCCccccccCCChhhhcccCccHHHHHHHHHHhccchhHHHHHHHhhhh
Q 038208 67 KENPFS-----------------LSSWFKGTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASDSEIMTSFVVKAECKQ 129 (228)
Q Consensus 67 ~~~~~~-----------------l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~ 129 (228)
++++.+ |+++++++.+.+|+. ..++.++|+..+.|.++|...... ...+++ .++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~f~~------~~~~~~~~~~~~~f~~~m~~~~~~-~~~~l~-~~~- 175 (352)
T 3mcz_A 105 TTSADYIGPIVEHQYLQWDNWPRLGEILRSEKPLAFQQ------ESRFAHDTRARDAFNDAMVRLSQP-MVDVVS-ELG- 175 (352)
T ss_dssp TTCTTCCHHHHHHHHTTTTTGGGHHHHHTCSSCCTTSH------HHHTTTCHHHHHHHHHHHHHHHHH-HHHHHH-TCG-
T ss_pred CCChhhHHHHHHHhHHHHHHHHHHHHHHhCCCCCCccc------ccccccCHHHHHHHHHHHHhhhhh-HHHHHH-hCC-
Confidence 666654 344444444332221 123457899999999999883322 236677 777
Q ss_pred hccC-CCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCCC---CCC-ceEeee
Q 038208 130 IFEG-LGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQF---VPP-ADAFLF 197 (228)
Q Consensus 130 ~~~~-~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~~---~p~-~D~v~~ 197 (228)
+.+ ..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+||+++.+|++++ .|+ ||+|++
T Consensus 176 -~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~ 254 (352)
T 3mcz_A 176 -VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVML 254 (352)
T ss_dssp -GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEE
T ss_pred -CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEE
Confidence 566 89999999999999999999999999999999988877653 36899999999984 554 999999
Q ss_pred hhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 198 KLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 198 ~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+++||+|+|+++.++|++++++|+|||.
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~ 282 (352)
T 3mcz_A 255 NDCLHYFDAREAREVIGHAAGLVKPGGA 282 (352)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHTEEEEEE
T ss_pred ecccccCCHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999999963
No 16
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=100.00 E-value=5.8e-33 Score=236.27 Aligned_cols=206 Identities=20% Similarity=0.218 Sum_probs=176.5
Q ss_pred chhhHHHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhc-hhhh
Q 038208 2 FNHLSSMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASS-TLLI 66 (228)
Q Consensus 2 ~g~~~~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~-~~l~ 66 (228)
+||+.+++|++++++||||+|++ +|+|++| +||+|++.|+|++. ++.|++|+.+ ++|.
T Consensus 15 ~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~l~~~-----~~~y~~t~~~~~~l~ 87 (335)
T 2r3s_A 15 NAYQRSAAIKAAVELNVFTAISQ--GIESSQSLAQKCQTSERGMRMLCDYLVIIGFMTKQ-----AEGYRLTSDSAMFLD 87 (335)
T ss_dssp TTHHHHHHHHHHHHTTHHHHHTT--SEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE-----TTEEEECHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcChHHHHhc--CCCCHHHHHHHhCCCchHHHHHHHHHHhcCCeEec-----CCEEecCHHHHHHhc
Confidence 68999999999999999999997 6999988 99999999999986 5899999999 6888
Q ss_pred hCCCCChHHh-------------------hccCCCCccccccCCChhhhcccCccHHHHHHHHHHhccchhHHHHHHHhh
Q 038208 67 KENPFSLSSW-------------------FKGTELTLWGTVHGIKFWEFLNQNPGINQRFNEAMASDSEIMTSFVVKAEC 127 (228)
Q Consensus 67 ~~~~~~l~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~ 127 (228)
++++.++..+ ++++. ++++ + |+++.++++..+.|.+.|..........+++ .+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 159 (335)
T 2r3s_A 88 RQSKFYVGDAIEFLLSPMITNGFNDLTAAVLKGG-TAIS-----S-EGTLSPEHPVWVQFAKAMSPMMANPAQLIAQ-LV 159 (335)
T ss_dssp TTSTTCCGGGHHHHTCHHHHGGGTTHHHHHHHTS-CCST-----T-TGGGSTTCTHHHHHHHHSGGGGHHHHHHHHH-HH
T ss_pred cCCcHHHHHHHHHhcchhhHHHHHhHHHHHhcCC-CCCC-----C-cccccCCHHHHHHHHHHHHHHHhhhHHHHHH-hc
Confidence 7766543332 33332 2221 2 7888889999999999999887776777788 77
Q ss_pred hhhc--cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCCC-ceEee
Q 038208 128 KQIF--EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQ-FVPP-ADAFL 196 (228)
Q Consensus 128 ~~~~--~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~-~~p~-~D~v~ 196 (228)
+ + .+..+|||||||+|.++..+++++|+.+++++|++.+++.+++ .+||+++.+|+++ ++|+ ||+|+
T Consensus 160 ~--~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~ 237 (335)
T 2r3s_A 160 N--ENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVL 237 (335)
T ss_dssp T--C--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEE
T ss_pred c--cccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEE
Confidence 7 5 6788999999999999999999999999999999988877764 3579999999988 6664 99999
Q ss_pred ehhhhcCCChhHHHHHHHHHHHHhccCC
Q 038208 197 FKLVFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 197 ~~~vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
+++++|+|+++++.++|++++++|+|||
T Consensus 238 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG 265 (335)
T 2r3s_A 238 LPNFLHHFDVATCEQLLRKIKTALAVEG 265 (335)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred EcchhccCCHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999997
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.75 E-value=5.2e-18 Score=139.73 Aligned_cols=95 Identities=15% Similarity=0.242 Sum_probs=85.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCCCceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVPPADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p~~D~v~~~~ 199 (228)
+.+..+|||||||+|.++..+++++ |+++++++|+ |.+++.|++ ..+|+++++|+.+ +++.+|+|++..
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 4567899999999999999999985 6789999999 899987763 4689999999988 677899999999
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+||++++++...+|++++++|||||.
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~LkpGG~ 173 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNPGGA 173 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred eeeecCchhHhHHHHHHHHHcCCCcE
Confidence 99999999888999999999999974
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.66 E-value=3.3e-16 Score=126.03 Aligned_cols=94 Identities=23% Similarity=0.380 Sum_probs=83.7
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCC-CceEeeehhhhcCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQ-FVP-PADAFLFKLVFHGL 204 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~-~~p-~~D~v~~~~vlh~~ 204 (228)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++|++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 122 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHHL 122 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGGS
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccccC
Confidence 4568999999999999999999999999999999 888877653 3489999999987 444 59999999999999
Q ss_pred ChhHHHHHHHHHHHHhccCCC
Q 038208 205 GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 205 ~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++...+|+++++.|+|||.
T Consensus 123 ~~~~~~~~l~~~~~~LkpgG~ 143 (234)
T 3dtn_A 123 EDEDKKELYKRSYSILKESGI 143 (234)
T ss_dssp CHHHHHHHHHHHHHHEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcE
Confidence 998888999999999999974
No 19
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.63 E-value=1.4e-15 Score=125.98 Aligned_cols=93 Identities=17% Similarity=0.293 Sum_probs=82.2
Q ss_pred CCCeEEEecCCC---cHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCCC------------C--C
Q 038208 133 GLGSLVDVGGGN---GSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQF------------V--P 190 (228)
Q Consensus 133 ~~~~vlDvGgG~---G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~~------------~--p 190 (228)
+..+|||||||+ |.++..+.+.+|+.+++++|+ |.+++.+++ .++++++.+|+.++ + .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 999888888899999999999 899987764 47899999999752 2 2
Q ss_pred CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 ~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+|+|++..+||++++++...+|++++++|+|||.
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~ 191 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSY 191 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCE
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcE
Confidence 58999999999999998889999999999999974
No 20
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.60 E-value=3.8e-15 Score=122.27 Aligned_cols=89 Identities=16% Similarity=0.209 Sum_probs=78.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCC--CceEeeehhhhcCCChh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ-FVP--PADAFLFKLVFHGLGDE 207 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh~~~d~ 207 (228)
....+|||||||+|.++..+++++ .+++++|+ +.+++.+++.++|+++.+|+.+ +++ .+|+|++..++|+++.+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~ 115 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLD 115 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHH
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHH
Confidence 456799999999999999999886 47999999 8999999988999999999977 666 39999999999877543
Q ss_pred HHHHHHHHHHHHhccCCC
Q 038208 208 DGLKILKKRREAIASNGE 225 (228)
Q Consensus 208 ~~~~il~~~~~aL~pgG~ 225 (228)
++++++++.|||||.
T Consensus 116 ---~~~~e~~rvLkpgG~ 130 (257)
T 4hg2_A 116 ---RFWAELRRVARPGAV 130 (257)
T ss_dssp ---HHHHHHHHHEEEEEE
T ss_pred ---HHHHHHHHHcCCCCE
Confidence 689999999999974
No 21
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.59 E-value=1.5e-15 Score=121.26 Aligned_cols=92 Identities=18% Similarity=0.302 Sum_probs=80.8
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCC--CceEeeehhhhc
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ-FVP--PADAFLFKLVFH 202 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh 202 (228)
....+|||||||+|.++..++++.| +++++|+ |.+++.+++ ..+++++.+|+.+ +++ .+|+|++..++|
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 4578999999999999999999987 8999999 888887764 3789999999987 555 499999999988
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+..++...+|+++++.|+|||.
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~gG~ 137 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKPSGK 137 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcE
Confidence 88888888999999999999974
No 22
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.58 E-value=8.5e-15 Score=116.07 Aligned_cols=102 Identities=22% Similarity=0.343 Sum_probs=85.7
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCCCCC--CceE
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE--TDNLKYIAGDMFQFVP--PADA 194 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~--~~rv~~~~gD~~~~~p--~~D~ 194 (228)
..+++ .+. ......+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+
T Consensus 35 ~~~~~-~l~-~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~ 110 (218)
T 3ou2_A 35 PAALE-RLR-AGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDA 110 (218)
T ss_dssp HHHHH-HHT-TTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEE
T ss_pred HHHHH-HHh-cCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeE
Confidence 33444 443 2455679999999999999999998 679999999 888887765 3789999999987544 4999
Q ss_pred eeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 195 FLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 195 v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|++..++|++++++...+|+++++.|+|||.
T Consensus 111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~ 141 (218)
T 3ou2_A 111 VFFAHWLAHVPDDRFEAFWESVRSAVAPGGV 141 (218)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCeE
Confidence 9999999999998889999999999999974
No 23
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.57 E-value=3.1e-15 Score=119.22 Aligned_cols=93 Identities=14% Similarity=0.091 Sum_probs=82.3
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C----CCeEEEeCCCCC-CCC--CceEee
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------T----DNLKYIAGDMFQ-FVP--PADAFL 196 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~----~rv~~~~gD~~~-~~p--~~D~v~ 196 (228)
.+..+|||||||+|.++..++++.|..+++++|+ +.+++.+++ . .+++++.+|+.. +.+ .||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 4578999999999999999999999999999999 888887764 1 289999999965 332 499999
Q ss_pred ehhhhcCCChhHHHHHHHHHHHHhccCC
Q 038208 197 FKLVFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 197 ~~~vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
+..++|++++++..++|+++++.|+|||
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG 135 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQT 135 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSE
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCE
Confidence 9999999999888999999999999996
No 24
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.57 E-value=7.5e-15 Score=116.86 Aligned_cols=100 Identities=18% Similarity=0.332 Sum_probs=85.0
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC-CCC-CceEe
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE--TDNLKYIAGDMFQ-FVP-PADAF 195 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~--~~rv~~~~gD~~~-~~p-~~D~v 195 (228)
.+++ .+. ..+..+|||||||+|.++..++++ +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|
T Consensus 36 ~~l~-~~~--~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v 110 (220)
T 3hnr_A 36 DILE-DVV--NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTI 110 (220)
T ss_dssp HHHH-HHH--HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEE
T ss_pred HHHH-Hhh--ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEE
Confidence 4455 444 346789999999999999999997 678999999 888887765 2589999999987 554 59999
Q ss_pred eehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 196 LFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++..++|++++++...+|+++++.|+|||.
T Consensus 111 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 140 (220)
T 3hnr_A 111 VSTYAFHHLTDDEKNVAIAKYSQLLNKGGK 140 (220)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCE
T ss_pred EECcchhcCChHHHHHHHHHHHHhcCCCCE
Confidence 999999999999888899999999999974
No 25
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.57 E-value=4.9e-15 Score=121.12 Aligned_cols=100 Identities=14% Similarity=0.270 Sum_probs=83.7
Q ss_pred HHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCC
Q 038208 119 TSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FVP 190 (228)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~p 190 (228)
...+++ .+. .....+|||||||+|.++..++++.+ +++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 26 ~~~l~~-~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 26 LAKLMQ-IAA--LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFT 100 (260)
T ss_dssp HHHHHH-HHT--CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSC
T ss_pred HHHHHH-HhC--CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCC
Confidence 445555 554 55778999999999999999999875 8999999 888887654 3689999999987 666
Q ss_pred --CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 --PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 --~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++..++|+++|. ..+|++++++|+|||.
T Consensus 101 ~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~ 135 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFPNP--ASFVSEAYRVLKKGGQ 135 (260)
T ss_dssp TTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEE
T ss_pred CCCEEEEEEhhhhHhcCCH--HHHHHHHHHHcCCCCE
Confidence 39999999999999876 5899999999999974
No 26
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.57 E-value=3.3e-15 Score=118.24 Aligned_cols=93 Identities=12% Similarity=0.084 Sum_probs=80.8
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------------------CCCeEEEeCCCCC-CCC
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------------------TDNLKYIAGDMFQ-FVP 190 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------------------~~rv~~~~gD~~~-~~p 190 (228)
+....+|||||||+|..+..++++ ..+++++|+ +.+++.+++ ..+++++++|+.+ +.+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 456789999999999999999998 568999999 888887653 2589999999988 433
Q ss_pred ---CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 ---PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 ---~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|+++.++|++++++..++++++++.|||||.
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 49999999999999988888999999999999974
No 27
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.56 E-value=5.3e-15 Score=117.75 Aligned_cols=95 Identities=17% Similarity=0.052 Sum_probs=82.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C----CCeEEEeCCCCC-CCC--CceEe
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------T----DNLKYIAGDMFQ-FVP--PADAF 195 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~----~rv~~~~gD~~~-~~p--~~D~v 195 (228)
..+..+|||||||+|.++..+++++|..+++++|+ +.+++.+++ . .+++++.+|+.. +.+ .||+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEE
Confidence 34678999999999999999999999899999999 888877653 1 289999999965 333 59999
Q ss_pred eehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 196 LFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++..++|++++++...+|+++++.|+|||.
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 136 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQPKIV 136 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEE
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999999998889999999999999973
No 28
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.56 E-value=1.5e-14 Score=116.93 Aligned_cols=91 Identities=19% Similarity=0.343 Sum_probs=79.6
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC---CCC--CceEeeehhhhcCC
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ---FVP--PADAFLFKLVFHGL 204 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~---~~p--~~D~v~~~~vlh~~ 204 (228)
+.+..+|||||||+|.++..++++ +.+++++|+ +.+++.+++. ++++.+|+.+ +++ .||+|++..++|++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~ 114 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHL 114 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGS
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhC
Confidence 456689999999999999999998 557999999 8888877644 9999999876 455 39999999999999
Q ss_pred ChhHHHHHHHHHHHHhccCCC
Q 038208 205 GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 205 ~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++...+|+++++.|||||.
T Consensus 115 ~~~~~~~~l~~~~~~LkpgG~ 135 (240)
T 3dli_A 115 DPERLFELLSLCYSKMKYSSY 135 (240)
T ss_dssp CGGGHHHHHHHHHHHBCTTCC
T ss_pred CcHHHHHHHHHHHHHcCCCcE
Confidence 988889999999999999975
No 29
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.55 E-value=7.1e-15 Score=119.98 Aligned_cols=94 Identities=20% Similarity=0.326 Sum_probs=82.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCC--CceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQ-FVP--PADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh 202 (228)
..+..+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..++|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAIL 131 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHH
Confidence 4567899999999999999999987 789999999 888876654 2799999999987 565 499999999999
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++++...+|+++++.|+|||.
T Consensus 132 ~~~~~~~~~~l~~~~~~L~pgG~ 154 (266)
T 3ujc_A 132 ALSLENKNKLFQKCYKWLKPTGT 154 (266)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEE
T ss_pred hcChHHHHHHHHHHHHHcCCCCE
Confidence 99888889999999999999974
No 30
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.55 E-value=2.1e-14 Score=113.69 Aligned_cols=88 Identities=19% Similarity=0.332 Sum_probs=77.7
Q ss_pred CeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC--CceEeeehhhhcC
Q 038208 135 GSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVP--PADAFLFKLVFHG 203 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh~ 203 (228)
.+|||||||+|.++..++++ |+.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..++|+
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 49999999999999999999 8899999999 888877664 3589999999988 665 3999999999999
Q ss_pred CChhHHHHHHHHHHHHhccCCC
Q 038208 204 LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+++. ..+|+++++.|+|||.
T Consensus 124 ~~~~--~~~l~~~~~~L~pgG~ 143 (219)
T 3dlc_A 124 WEDV--ATAFREIYRILKSGGK 143 (219)
T ss_dssp CSCH--HHHHHHHHHHEEEEEE
T ss_pred ccCH--HHHHHHHHHhCCCCCE
Confidence 9665 6899999999999974
No 31
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=4.8e-14 Score=115.56 Aligned_cols=97 Identities=14% Similarity=0.274 Sum_probs=83.2
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCC--CceEe
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ-FVP--PADAF 195 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~-~~p--~~D~v 195 (228)
..+++ .++ ..+..+|||||||+|.++..+++ |+.+++++|+ |.+++.++...+++++.+|+.+ +++ .||+|
T Consensus 24 ~~l~~-~~~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 24 NAIIN-LLN--LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp HHHHH-HHC--CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEE
T ss_pred HHHHH-HhC--CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEE
Confidence 33444 443 45678999999999999999998 6889999999 8999988876699999999987 555 49999
Q ss_pred eehhhhcCCChhHHHHHHHHHHHHhccCC
Q 038208 196 LFKLVFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 196 ~~~~vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
++++++|++++. ..+|+++++.|| ||
T Consensus 99 ~~~~~l~~~~~~--~~~l~~~~~~Lk-gG 124 (261)
T 3ege_A 99 ISILAIHHFSHL--EKSFQEMQRIIR-DG 124 (261)
T ss_dssp EEESCGGGCSSH--HHHHHHHHHHBC-SS
T ss_pred EEcchHhhccCH--HHHHHHHHHHhC-Cc
Confidence 999999999765 689999999999 97
No 32
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.53 E-value=2.6e-14 Score=117.00 Aligned_cols=93 Identities=19% Similarity=0.196 Sum_probs=80.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCC-CceEeeehh-hhcCCC
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-TDNLKYIAGDMFQ-FVP-PADAFLFKL-VFHGLG 205 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~-~~p-~~D~v~~~~-vlh~~~ 205 (228)
.++..+|||||||+|.++..++++. .+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++.. ++|+++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSC
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcC
Confidence 3566899999999999999999985 47999999 888888765 5689999999987 444 499999998 999986
Q ss_pred h-hHHHHHHHHHHHHhccCCC
Q 038208 206 D-EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 206 d-~~~~~il~~~~~aL~pgG~ 225 (228)
+ ++...+|+++++.|+|||.
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~ 146 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGV 146 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcE
Confidence 4 6778999999999999974
No 33
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.53 E-value=5.9e-15 Score=119.88 Aligned_cols=94 Identities=21% Similarity=0.286 Sum_probs=81.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCC--CceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQ-FVP--PADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh 202 (228)
..+..+|||||||+|.++..++++. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++.+++|
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGG
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhh
Confidence 3457899999999999999999987 567999999 888877664 2689999999977 555 499999999999
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++++...+|+++++.|+|||.
T Consensus 170 ~~~~~~~~~~l~~~~~~LkpgG~ 192 (254)
T 1xtp_A 170 YLTDADFVKFFKHCQQALTPNGY 192 (254)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeE
Confidence 99988889999999999999974
No 34
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.52 E-value=1.4e-14 Score=120.96 Aligned_cols=95 Identities=15% Similarity=0.234 Sum_probs=80.6
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C---------------------------
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------T--------------------------- 175 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~--------------------------- 175 (228)
+....+|||||||+|.++..+++++|..+++++|+ +.+++.|++ .
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 34578999999999999999999999999999999 888876542 0
Q ss_pred ------------------------------CCeEEEeCCCCCCC------C--CceEeeehhhhcCC----ChhHHHHHH
Q 038208 176 ------------------------------DNLKYIAGDMFQFV------P--PADAFLFKLVFHGL----GDEDGLKIL 213 (228)
Q Consensus 176 ------------------------------~rv~~~~gD~~~~~------p--~~D~v~~~~vlh~~----~d~~~~~il 213 (228)
.+|+|+.+|+.... + .||+|++..+++++ +++...++|
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 58999999998622 2 49999999998554 788889999
Q ss_pred HHHHHHhccCCC
Q 038208 214 KKRREAIASNGE 225 (228)
Q Consensus 214 ~~~~~aL~pgG~ 225 (228)
+++++.|+|||.
T Consensus 204 ~~~~~~LkpGG~ 215 (292)
T 3g07_A 204 RRIYRHLRPGGI 215 (292)
T ss_dssp HHHHHHEEEEEE
T ss_pred HHHHHHhCCCcE
Confidence 999999999974
No 35
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.51 E-value=2.6e-14 Score=113.59 Aligned_cols=101 Identities=22% Similarity=0.305 Sum_probs=85.6
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCC
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FVP 190 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~p 190 (228)
..+++ .+. .....+|||||||+|.++..+++.. |..+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 27 ~~~~~-~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 27 EKVLK-EFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHH-HHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSC
T ss_pred HHHHH-HhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCC
Confidence 44555 554 5667899999999999999999997 8889999999 888887764 3589999999987 555
Q ss_pred --CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 --PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 --~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++..++|++++. ..+|+++++.|+|||.
T Consensus 104 ~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~ 138 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEP--LKFLEELKRVAKPFAY 138 (219)
T ss_dssp SSCEEEEEEESCGGGCSSH--HHHHHHHHHHEEEEEE
T ss_pred CCCeeEEEeehhhhhcCCH--HHHHHHHHHHhCCCeE
Confidence 39999999999999765 7899999999999974
No 36
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.51 E-value=2.3e-14 Score=116.56 Aligned_cols=92 Identities=15% Similarity=0.172 Sum_probs=79.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC-CceEeeehhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVP-PADAFLFKLV 200 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p-~~D~v~~~~v 200 (228)
..+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .||+|++..+
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~V~~~~~ 112 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGA 112 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCCCCEEEECCC
Confidence 4567899999999999999999988 678999999 888887753 3689999999987 343 4999999999
Q ss_pred hcCCChhHHHHHHHHHHHHhccCCC
Q 038208 201 FHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+|++++. ..+|+++++.|||||.
T Consensus 113 ~~~~~~~--~~~l~~~~r~LkpgG~ 135 (256)
T 1nkv_A 113 TWIAGGF--AGAEELLAQSLKPGGI 135 (256)
T ss_dssp GGGTSSS--HHHHHHHTTSEEEEEE
T ss_pred hHhcCCH--HHHHHHHHHHcCCCeE
Confidence 9999865 7899999999999974
No 37
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.51 E-value=3e-14 Score=117.38 Aligned_cols=93 Identities=19% Similarity=0.384 Sum_probs=82.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCC--CceEeeehhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FVP--PADAFLFKLV 200 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~p--~~D~v~~~~v 200 (228)
+.+..+|||||||+|.++..+++++|+.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|+++.+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 45678999999999999999999999999999999 888877653 3689999999987 554 4999999999
Q ss_pred hcCCChhHHHHHHHHHHHHhccCCC
Q 038208 201 FHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+|++++. ..+|+++++.|+|||.
T Consensus 115 l~~~~~~--~~~l~~~~~~L~pgG~ 137 (276)
T 3mgg_A 115 LEHLQSP--EEALKSLKKVLKPGGT 137 (276)
T ss_dssp GGGCSCH--HHHHHHHHHHEEEEEE
T ss_pred hhhcCCH--HHHHHHHHHHcCCCcE
Confidence 9999887 4899999999999974
No 38
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.51 E-value=1.8e-14 Score=113.32 Aligned_cols=90 Identities=18% Similarity=0.245 Sum_probs=80.6
Q ss_pred CCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCC--CceEeeehhhhcCCChhH
Q 038208 134 LGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-TDNLKYIAGDMFQ-FVP--PADAFLFKLVFHGLGDED 208 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh~~~d~~ 208 (228)
..+|||||||+|.++..++++ +.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|++++++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 789999999999999999998 568999999 888888775 6789999999987 554 499999999999999888
Q ss_pred HHHHHHHHHHHhccCCC
Q 038208 209 GLKILKKRREAIASNGE 225 (228)
Q Consensus 209 ~~~il~~~~~aL~pgG~ 225 (228)
...+|+++++.|+|||.
T Consensus 120 ~~~~l~~~~~~L~pgG~ 136 (203)
T 3h2b_A 120 LPDALVALRMAVEDGGG 136 (203)
T ss_dssp HHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHcCCCcE
Confidence 89999999999999974
No 39
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.51 E-value=3.6e-14 Score=118.14 Aligned_cols=92 Identities=21% Similarity=0.344 Sum_probs=80.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC--CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVP--PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p--~~D~v~~~~ 199 (228)
+....+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 4567899999999999999999986 469999999 888877653 3689999999988 665 399999999
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++|++++. ..+|+++++.|||||.
T Consensus 159 ~l~~~~~~--~~~l~~~~~~LkpgG~ 182 (297)
T 2o57_A 159 AFLHSPDK--LKVFQECARVLKPRGV 182 (297)
T ss_dssp CGGGCSCH--HHHHHHHHHHEEEEEE
T ss_pred hhhhcCCH--HHHHHHHHHHcCCCeE
Confidence 99999884 7899999999999974
No 40
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=3.3e-14 Score=115.12 Aligned_cols=93 Identities=20% Similarity=0.277 Sum_probs=81.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEeCCCCC-CCC-------CceEeeeh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE---TDNLKYIAGDMFQ-FVP-------PADAFLFK 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~---~~rv~~~~gD~~~-~~p-------~~D~v~~~ 198 (228)
.....+|||||||+|.++..+++..+ +++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .+|+|++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 34568999999999999999999988 7999999 888887754 4589999999987 322 28999999
Q ss_pred hhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.++|++++++...+|+++++.|+|||.
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~LkpgG~ 158 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGKQGA 158 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTTTCE
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCE
Confidence 999999988889999999999999974
No 41
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.51 E-value=4.3e-14 Score=114.96 Aligned_cols=90 Identities=19% Similarity=0.187 Sum_probs=78.7
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEeCCCCC-CCC--CceEeeehhhhcCCC
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE---TDNLKYIAGDMFQ-FVP--PADAFLFKLVFHGLG 205 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~---~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh~~~ 205 (228)
+..+|||||||+|.++..+++..+. +++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|+++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 122 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIA 122 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhh
Confidence 5789999999999999999998765 8999999 888887764 4789999999977 554 499999999999996
Q ss_pred hhHHHHHHHHHHHHhccCCC
Q 038208 206 DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 206 d~~~~~il~~~~~aL~pgG~ 225 (228)
+. ..+|+++++.|+|||.
T Consensus 123 ~~--~~~l~~~~~~LkpgG~ 140 (253)
T 3g5l_A 123 SF--DDICKKVYINLKSSGS 140 (253)
T ss_dssp CH--HHHHHHHHHHEEEEEE
T ss_pred hH--HHHHHHHHHHcCCCcE
Confidence 64 7899999999999974
No 42
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=2.6e-14 Score=118.14 Aligned_cols=101 Identities=17% Similarity=0.235 Sum_probs=84.7
Q ss_pred hHHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCC-Cce
Q 038208 118 MTSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-TDNLKYIAGDMFQ-FVP-PAD 193 (228)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~-~~p-~~D 193 (228)
....+++ .+. ..+..+|||||||+|.++..+++ |..+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||
T Consensus 45 ~~~~l~~-~l~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD 119 (279)
T 3ccf_A 45 YGEDLLQ-LLN--PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLD 119 (279)
T ss_dssp SCCHHHH-HHC--CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEE
T ss_pred HHHHHHH-HhC--CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcC
Confidence 3445556 554 45678999999999999999998 7889999999 888887765 4789999999987 444 499
Q ss_pred EeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 194 AFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 194 ~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+|+++.++|++++. ..+|+++++.|+|||.
T Consensus 120 ~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~ 149 (279)
T 3ccf_A 120 AVFSNAMLHWVKEP--EAAIASIHQALKSGGR 149 (279)
T ss_dssp EEEEESCGGGCSCH--HHHHHHHHHHEEEEEE
T ss_pred EEEEcchhhhCcCH--HHHHHHHHHhcCCCcE
Confidence 99999999998876 5899999999999974
No 43
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.50 E-value=2.5e-14 Score=118.73 Aligned_cols=93 Identities=18% Similarity=0.267 Sum_probs=81.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCC-CceEeeehhhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPG-IKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ-FVP-PADAFLFKLVF 201 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~-~~p-~~D~v~~~~vl 201 (228)
..+..+|||||||+|.++..+++.+|. .+++++|+ |.+++.+++ ..+++++.+|+.+ +++ .||+|+++.++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l 99 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFL 99 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCG
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChh
Confidence 456789999999999999999999995 89999999 888876653 3489999999987 455 49999999999
Q ss_pred cCCChhHHHHHHHHHHHHhccCCC
Q 038208 202 HGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|++++. ..+|+++++.|+|||.
T Consensus 100 ~~~~~~--~~~l~~~~~~LkpgG~ 121 (284)
T 3gu3_A 100 LHMTTP--ETMLQKMIHSVKKGGK 121 (284)
T ss_dssp GGCSSH--HHHHHHHHHTEEEEEE
T ss_pred hcCCCH--HHHHHHHHHHcCCCCE
Confidence 999877 5899999999999974
No 44
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.50 E-value=8.5e-14 Score=117.00 Aligned_cols=91 Identities=14% Similarity=0.111 Sum_probs=78.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC--CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVP--PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p--~~D~v~~~~ 199 (228)
+.+..+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 4567899999999999999999986 678999999 888877664 3589999999987 555 499999999
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++|+++ ...+|+++++.|||||.
T Consensus 194 ~l~~~~---~~~~l~~~~~~LkpgG~ 216 (312)
T 3vc1_A 194 STMYVD---LHDLFSEHSRFLKVGGR 216 (312)
T ss_dssp CGGGSC---HHHHHHHHHHHEEEEEE
T ss_pred chhhCC---HHHHHHHHHHHcCCCcE
Confidence 999994 57899999999999974
No 45
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.49 E-value=5e-14 Score=115.73 Aligned_cols=100 Identities=15% Similarity=0.192 Sum_probs=83.8
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVP 190 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p 190 (228)
..+++ .++ ..+..+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 51 ~~l~~-~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 51 DEMIA-LLD--VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHH-HSC--CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC
T ss_pred HHHHH-hcC--CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC
Confidence 34455 444 5567899999999999999999987 689999999 788776653 4589999999987 565
Q ss_pred --CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 --PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 --~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++..++|++++. ..+|+++++.|+|||.
T Consensus 127 ~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~ 161 (273)
T 3bus_A 127 DASFDAVWALESLHHMPDR--GRALREMARVLRPGGT 161 (273)
T ss_dssp TTCEEEEEEESCTTTSSCH--HHHHHHHHTTEEEEEE
T ss_pred CCCccEEEEechhhhCCCH--HHHHHHHHHHcCCCeE
Confidence 39999999999999876 6899999999999974
No 46
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.49 E-value=5.6e-14 Score=116.44 Aligned_cols=94 Identities=18% Similarity=0.229 Sum_probs=80.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCCCceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVPPADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p~~D~v~~~~vlh 202 (228)
+.+..+|||||||+|.++..++++++ .+++++|+ +.+++.+++ .++++++.+|+.+....||+|++..++|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFE 140 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGG
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchh
Confidence 45678999999999999999997775 49999999 888876653 3689999999965114599999999999
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++++...+|+++++.|||||.
T Consensus 141 ~~~~~~~~~~l~~~~~~LkpgG~ 163 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPADGV 163 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCTTCE
T ss_pred hcChHHHHHHHHHHHHhcCCCCE
Confidence 99877778999999999999974
No 47
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.49 E-value=6.2e-14 Score=113.36 Aligned_cols=99 Identities=17% Similarity=0.332 Sum_probs=82.8
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCC-
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FVP- 190 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~p- 190 (228)
..+++ .+. ..+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 11 ~~~~~-~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 11 GLMIK-TAE--CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHH-HHT--CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred chHHH-HhC--cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 33445 444 56788999999999999999999875 8999999 888877654 3689999999977 555
Q ss_pred -CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 -PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 -~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++..++|++++. ..+|+++++.|+|||.
T Consensus 86 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~ 119 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDV--RKAVREVARVLKQDGR 119 (239)
T ss_dssp TCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEE
T ss_pred CcEEEEEECCchhhccCH--HHHHHHHHHHcCCCcE
Confidence 39999999999999875 6899999999999974
No 48
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.49 E-value=2.8e-14 Score=116.20 Aligned_cols=93 Identities=19% Similarity=0.273 Sum_probs=81.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCC-CceEeeehhhhcCCCh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-TDNLKYIAGDMFQ-FVP-PADAFLFKLVFHGLGD 206 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~-~~p-~~D~v~~~~vlh~~~d 206 (228)
.....+|||||||+|.++..+++++|..+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .||+|+++.++|++++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 110 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLYANAVFQWVPD 110 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEEEESCGGGSTT
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEEEeCchhhCCC
Confidence 45678999999999999999999999999999999 888887765 5789999999977 422 4999999999999976
Q ss_pred hHHHHHHHHHHHHhccCCC
Q 038208 207 EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 207 ~~~~~il~~~~~aL~pgG~ 225 (228)
. ..+|+++++.|+|||.
T Consensus 111 ~--~~~l~~~~~~L~pgG~ 127 (259)
T 2p35_A 111 H--LAVLSQLMDQLESGGV 127 (259)
T ss_dssp H--HHHHHHHGGGEEEEEE
T ss_pred H--HHHHHHHHHhcCCCeE
Confidence 4 6899999999999974
No 49
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.49 E-value=4.8e-14 Score=116.63 Aligned_cols=93 Identities=14% Similarity=0.218 Sum_probs=78.5
Q ss_pred CCCeEEEecCCCcH----HHHHHHHHCC----CCeEEEeec-hHHHhcCCCC----------------------------
Q 038208 133 GLGSLVDVGGGNGS----FSRIISEAFP----GIKCTVLDL-PHVVANLPET---------------------------- 175 (228)
Q Consensus 133 ~~~~vlDvGgG~G~----~~~~l~~~~p----~~~~~~~Dl-p~~i~~a~~~---------------------------- 175 (228)
+..+|+|+|||+|. +++.+++..| +.++++.|+ +.+++.|++.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 5666777655 468999999 8888876531
Q ss_pred ---------CCeEEEeCCCCC-CCC---CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 176 ---------DNLKYIAGDMFQ-FVP---PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 176 ---------~rv~~~~gD~~~-~~p---~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+|+|..+|+.+ ++| .||+|+++++|++++++...+++++++++|+|||.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~ 247 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGL 247 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcE
Confidence 369999999998 455 49999999999999999889999999999999974
No 50
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.49 E-value=7.6e-14 Score=109.01 Aligned_cols=100 Identities=22% Similarity=0.232 Sum_probs=83.9
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCC-C
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FVP-P 191 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~p-~ 191 (228)
.+++ .++ ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .
T Consensus 23 ~l~~-~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 97 (199)
T 2xvm_A 23 EVLE-AVK--VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQ 97 (199)
T ss_dssp HHHH-HTT--TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCC
T ss_pred HHHH-Hhh--ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCC
Confidence 4455 444 445679999999999999999987 679999999 888887654 3479999999987 444 4
Q ss_pred ceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 192 ADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 192 ~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
||+|++..++|++++++...+|+++++.|+|||.
T Consensus 98 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~ 131 (199)
T 2xvm_A 98 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGY 131 (199)
T ss_dssp EEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEE
T ss_pred ceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeE
Confidence 9999999999999988889999999999999974
No 51
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.49 E-value=7e-14 Score=112.68 Aligned_cols=91 Identities=24% Similarity=0.328 Sum_probs=77.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEeCCCCC-CCC--CceEeeehhhhcCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE---TDNLKYIAGDMFQ-FVP--PADAFLFKLVFHGL 204 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~---~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh~~ 204 (228)
....+|||||||+|.++..++++.+ .+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|++
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecccccc
Confidence 4568999999999999999998732 38999999 888877654 3579999999987 554 49999999999999
Q ss_pred ChhHHHHHHHHHHHHhccCCC
Q 038208 205 GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 205 ~d~~~~~il~~~~~aL~pgG~ 225 (228)
++. ..+|+++++.|+|||.
T Consensus 121 ~~~--~~~l~~~~~~L~pgG~ 139 (243)
T 3bkw_A 121 EDV--ARLFRTVHQALSPGGH 139 (243)
T ss_dssp SCH--HHHHHHHHHHEEEEEE
T ss_pred chH--HHHHHHHHHhcCcCcE
Confidence 764 6899999999999974
No 52
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.49 E-value=8.1e-14 Score=116.33 Aligned_cols=91 Identities=18% Similarity=0.141 Sum_probs=79.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC--------CCCeEEEeCCCCC-CCC--------Cc
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANLPE--------TDNLKYIAGDMFQ-FVP--------PA 192 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~--------~~rv~~~~gD~~~-~~p--------~~ 192 (228)
.+..+|||||||+|.++..+++++ +..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 467899999999999999999987 8999999999 888887753 4699999999987 432 49
Q ss_pred eEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 193 DAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 193 D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|+|++..++|++ + ...+|+++++.|+|||.
T Consensus 115 D~V~~~~~l~~~-~--~~~~l~~~~~~LkpgG~ 144 (299)
T 3g5t_A 115 DMITAVECAHWF-D--FEKFQRSAYANLRKDGT 144 (299)
T ss_dssp EEEEEESCGGGS-C--HHHHHHHHHHHEEEEEE
T ss_pred eEEeHhhHHHHh-C--HHHHHHHHHHhcCCCcE
Confidence 999999999999 3 47899999999999974
No 53
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.48 E-value=3.1e-14 Score=112.68 Aligned_cols=93 Identities=16% Similarity=0.140 Sum_probs=80.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCC-CceEeeehhhhcCCChh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ-FVP-PADAFLFKLVFHGLGDE 207 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~-~~p-~~D~v~~~~vlh~~~d~ 207 (228)
+.+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++..+++++.+|+.+ +.+ .||+|++..++|+++++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHH
Confidence 456789999999999999999987 568999999 8888877754478889999877 423 49999999999999988
Q ss_pred HHHHHHHHHHHHhccCCC
Q 038208 208 DGLKILKKRREAIASNGE 225 (228)
Q Consensus 208 ~~~~il~~~~~aL~pgG~ 225 (228)
+...+|+++++.|+|||.
T Consensus 119 ~~~~~l~~~~~~LkpgG~ 136 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGL 136 (211)
T ss_dssp HHHHHHHHHHHHEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcE
Confidence 889999999999999974
No 54
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.48 E-value=4.2e-14 Score=115.70 Aligned_cols=92 Identities=5% Similarity=-0.036 Sum_probs=79.6
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------------------CCCeEEEeCCCCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----------------------TDNLKYIAGDMFQ 187 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----------------------~~rv~~~~gD~~~ 187 (228)
....+|||||||+|..+..++++ +.+++++|+ +.+++.+++ ..+|+++++|+++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 35689999999999999999987 568999999 888876632 2589999999988
Q ss_pred -CC---CCceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 188 -FV---PPADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 188 -~~---p~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+. ..||+|+.+.+||++++++...+++++++.|||||.
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~ 186 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQ 186 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeE
Confidence 43 349999999999999988888999999999999974
No 55
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.47 E-value=5.4e-14 Score=113.38 Aligned_cols=90 Identities=20% Similarity=0.364 Sum_probs=77.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCCCCC--CceEeeehhhhcCCCh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE--TDNLKYIAGDMFQFVP--PADAFLFKLVFHGLGD 206 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~--~~rv~~~~gD~~~~~p--~~D~v~~~~vlh~~~d 206 (228)
.+..+|||||||+|.++..++++++ +++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++.++||++++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcC
Confidence 4567899999999999999999876 6999999 888887764 2289999999977433 4999999999999987
Q ss_pred hHHHHHHHHHH-HHhccCCC
Q 038208 207 EDGLKILKKRR-EAIASNGE 225 (228)
Q Consensus 207 ~~~~~il~~~~-~aL~pgG~ 225 (228)
. ..+|++++ +.|+|||.
T Consensus 119 ~--~~~l~~~~~~~LkpgG~ 136 (250)
T 2p7i_A 119 P--VALLKRINDDWLAEGGR 136 (250)
T ss_dssp H--HHHHHHHHHTTEEEEEE
T ss_pred H--HHHHHHHHHHhcCCCCE
Confidence 6 68999999 99999974
No 56
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.47 E-value=5e-14 Score=113.42 Aligned_cols=90 Identities=22% Similarity=0.314 Sum_probs=78.4
Q ss_pred CCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC--CceEeeehhhhcC
Q 038208 134 LGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVP--PADAFLFKLVFHG 203 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p--~~D~v~~~~vlh~ 203 (228)
..+|||||||+|.++..+++ +..+++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++..++|+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 46999999999999999977 5778999999 888877654 2569999999988333 4999999999999
Q ss_pred CChhHHHHHHHHHHHHhccCCC
Q 038208 204 LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+++++...+|+++++.|+|||.
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~ 166 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGE 166 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcE
Confidence 9988889999999999999974
No 57
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.47 E-value=1.2e-13 Score=115.48 Aligned_cols=101 Identities=20% Similarity=0.203 Sum_probs=83.9
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCCCc
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVPPA 192 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p~~ 192 (228)
.+++ .+. ..+..+|||||||+|.++..++++++ .+++++|+ +.+++.+++ .++++++.+|+.+.-..|
T Consensus 63 ~~~~-~~~--~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~f 138 (302)
T 3hem_A 63 LALD-KLN--LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPV 138 (302)
T ss_dssp HHHH-TTC--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCC
T ss_pred HHHH-HcC--CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCc
Confidence 3444 443 45678999999999999999999987 89999999 888877764 358999999997642259
Q ss_pred eEeeehhhhcCCCh-------hHHHHHHHHHHHHhccCCC
Q 038208 193 DAFLFKLVFHGLGD-------EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 193 D~v~~~~vlh~~~d-------~~~~~il~~~~~aL~pgG~ 225 (228)
|+|++..++|+++| +....+|+++++.|||||.
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~ 178 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGR 178 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCE
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcE
Confidence 99999999999954 6678999999999999974
No 58
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.47 E-value=1.5e-13 Score=110.73 Aligned_cols=91 Identities=21% Similarity=0.308 Sum_probs=79.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEeCCCCC-CCC--CceEeeehhhhcC
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE---TDNLKYIAGDMFQ-FVP--PADAFLFKLVFHG 203 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~---~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh~ 203 (228)
+.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++.+++|+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhh
Confidence 456789999999999999999998 568999999 888887765 5789999999987 555 4999999999999
Q ss_pred CChhHHHHHHHHHHHHhccCCC
Q 038208 204 LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+++. ..+|+++++.|+|||.
T Consensus 129 ~~~~--~~~l~~~~~~L~pgG~ 148 (242)
T 3l8d_A 129 TEEP--LRALNEIKRVLKSDGY 148 (242)
T ss_dssp SSCH--HHHHHHHHHHEEEEEE
T ss_pred ccCH--HHHHHHHHHHhCCCeE
Confidence 9766 5899999999999974
No 59
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.46 E-value=1.9e-13 Score=109.76 Aligned_cols=92 Identities=18% Similarity=0.190 Sum_probs=78.6
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCC-CceEee-ehhhhcCCCh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-TDNLKYIAGDMFQ-FVP-PADAFL-FKLVFHGLGD 206 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~-~~p-~~D~v~-~~~vlh~~~d 206 (228)
.+..+|||||||+|.++..++++++ +++++|+ +.+++.+++ .++++++.+|+.+ +.+ .||+|+ +..++|++++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCC
Confidence 4678999999999999999999976 8999999 888887765 5689999999987 444 499999 4558888754
Q ss_pred -hHHHHHHHHHHHHhccCCC
Q 038208 207 -EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 207 -~~~~~il~~~~~aL~pgG~ 225 (228)
++...+|+++++.|+|||.
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~ 136 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGV 136 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeE
Confidence 6778999999999999974
No 60
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.46 E-value=1.5e-13 Score=115.67 Aligned_cols=94 Identities=20% Similarity=0.280 Sum_probs=80.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCCCceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVPPADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p~~D~v~~~~vlh 202 (228)
..+..+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.+|+.+....||+|++..++|
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFE 166 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGG
T ss_pred CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHH
Confidence 4567899999999999999999987 569999999 888877653 3679999999965213599999999999
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++++...+|+++++.|+|||.
T Consensus 167 ~~~~~~~~~~l~~~~~~LkpgG~ 189 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPADGR 189 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCTTCE
T ss_pred hcCHHHHHHHHHHHHHhcCCCcE
Confidence 99887789999999999999974
No 61
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.46 E-value=3e-14 Score=119.40 Aligned_cols=95 Identities=14% Similarity=0.113 Sum_probs=80.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHH-HHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC-CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIIS-EAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVP-PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~-~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p-~~D~v~~~~ 199 (228)
+.+..+|||||||+|.++..++ +.+|+.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 4567899999999999999996 6789999999999 888877653 3469999999987 444 499999999
Q ss_pred hhcCCChh-HHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDE-DGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~-~~~~il~~~~~aL~pgG~ 225 (228)
++|++++. ....+|+++++.|+|||.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~ 222 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGA 222 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeE
Confidence 99999654 445799999999999974
No 62
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.45 E-value=1.3e-13 Score=115.16 Aligned_cols=91 Identities=20% Similarity=0.329 Sum_probs=78.0
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----C----CCeEEEeCCCCC-CCC-CceEeee-hh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----T----DNLKYIAGDMFQ-FVP-PADAFLF-KL 199 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~----~rv~~~~gD~~~-~~p-~~D~v~~-~~ 199 (228)
...+|||||||+|.++..++++ ..+++++|+ +.+++.+++ . .+++++.+|+.+ +.+ .||+|++ ..
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 159 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSG 159 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHH
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCc
Confidence 4459999999999999999998 578999999 888887764 1 789999999988 555 4998885 57
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++|++++++...+|+++++.|+|||.
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~ 185 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGK 185 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcE
Confidence 88888888889999999999999974
No 63
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.45 E-value=2.4e-13 Score=110.74 Aligned_cols=91 Identities=14% Similarity=0.250 Sum_probs=77.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCC--CceEeeehhhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ-FVP--PADAFLFKLVF 201 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~-~~p--~~D~v~~~~vl 201 (228)
..+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 456789999999999999999987 578999999 888876643 4789999999977 555 39999999999
Q ss_pred cCCChhHHHHHHHHHHHHhccCCC
Q 038208 202 HGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|++++. ..+|+++++.|+|||.
T Consensus 115 ~~~~~~--~~~l~~~~~~L~pgG~ 136 (263)
T 2yqz_A 115 HLVPDW--PKVLAEAIRVLKPGGA 136 (263)
T ss_dssp GGCTTH--HHHHHHHHHHEEEEEE
T ss_pred hhcCCH--HHHHHHHHHHCCCCcE
Confidence 999864 6899999999999974
No 64
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.45 E-value=4.8e-14 Score=121.63 Aligned_cols=88 Identities=10% Similarity=0.054 Sum_probs=75.1
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC-----CceEeeehhh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFVP-----PADAFLFKLV 200 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~p-----~~D~v~~~~v 200 (228)
+..+||||| |+|.++..+++..|+.+++++|+ |.+++.+++ ..+|+++.+|+.+++| .||+|++...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 467999999 99999999999999899999999 899987764 2389999999987443 4999999877
Q ss_pred hcCCChhHHHHHHHHHHHHhccCC
Q 038208 201 FHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 201 lh~~~d~~~~~il~~~~~aL~pgG 224 (228)
+|... ...++++++++|+|||
T Consensus 251 ~~~~~---~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 251 ETLEA---IRAFVGRGIATLKGPR 271 (373)
T ss_dssp SSHHH---HHHHHHHHHHTBCSTT
T ss_pred CchHH---HHHHHHHHHHHcccCC
Confidence 65442 4889999999999998
No 65
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.45 E-value=1.1e-13 Score=112.65 Aligned_cols=91 Identities=20% Similarity=0.287 Sum_probs=78.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC--CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVP--PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p--~~D~v~~~~ 199 (228)
+.+..+|||||||+|.++..+++.+|. +++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 455679999999999999999999986 9999999 888877653 4679999999976 555 499999999
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++|+++ ...+|+++++.|+|||.
T Consensus 123 ~l~~~~---~~~~l~~~~~~L~pgG~ 145 (257)
T 3f4k_A 123 AIYNIG---FERGMNEWSKYLKKGGF 145 (257)
T ss_dssp CSCCCC---HHHHHHHHHTTEEEEEE
T ss_pred hHhhcC---HHHHHHHHHHHcCCCcE
Confidence 999983 35799999999999974
No 66
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.45 E-value=1.8e-13 Score=113.36 Aligned_cols=101 Identities=26% Similarity=0.229 Sum_probs=85.2
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCC-C
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ-FVP-P 191 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~-~~p-~ 191 (228)
..+++ .++ .....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .
T Consensus 110 ~~~~~-~~~--~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 184 (286)
T 3m70_A 110 GDVVD-AAK--IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQEN 184 (286)
T ss_dssp HHHHH-HHH--HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSC
T ss_pred HHHHH-Hhh--ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCC
Confidence 34455 554 346789999999999999999998 568999999 888877664 2389999999987 444 4
Q ss_pred ceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 192 ADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 192 ~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
||+|++..++|+++++....+|+++++.|+|||.
T Consensus 185 fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 218 (286)
T 3m70_A 185 YDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGY 218 (286)
T ss_dssp EEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEE
T ss_pred ccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcE
Confidence 9999999999999999889999999999999974
No 67
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.45 E-value=1.2e-13 Score=109.52 Aligned_cols=92 Identities=18% Similarity=0.323 Sum_probs=78.5
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCCCCC--CceEeeehhhhcCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQFVP--PADAFLFKLVFHGL 204 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~~~p--~~D~v~~~~vlh~~ 204 (228)
.+..+|||||||+|.++..++++. .+++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++..++|++
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 127 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYYL 127 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGGS
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHhC
Confidence 456799999999999999999985 48999999 888877654 4589999999988323 49999999999999
Q ss_pred Ch-hHHHHHHHHHHHHhccCCC
Q 038208 205 GD-EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 205 ~d-~~~~~il~~~~~aL~pgG~ 225 (228)
++ +...++|+++++.|+|||.
T Consensus 128 ~~~~~~~~~l~~~~~~L~pgG~ 149 (216)
T 3ofk_A 128 EDMTQMRTAIDNMVKMLAPGGH 149 (216)
T ss_dssp SSHHHHHHHHHHHHHTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCE
Confidence 86 5667899999999999974
No 68
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.44 E-value=6.6e-14 Score=113.20 Aligned_cols=92 Identities=15% Similarity=0.256 Sum_probs=79.7
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCC--CceEeeehhhhc
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FVP--PADAFLFKLVFH 202 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh 202 (228)
+..+|||||||+|.++..++++. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 46899999999999999999887 568999999 888887664 2369999999876 444 399999999999
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++++...+|+++++.|+|||.
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~ 180 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGI 180 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeE
Confidence 99998888999999999999974
No 69
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.44 E-value=5.5e-13 Score=108.22 Aligned_cols=92 Identities=21% Similarity=0.301 Sum_probs=77.7
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCC-CceEeeeh-hhhc
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ-FVP-PADAFLFK-LVFH 202 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~-~~p-~~D~v~~~-~vlh 202 (228)
.+..+|||||||+|.++..++++ +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .+|+|++. ..+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIM 117 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcCCchh
Confidence 35679999999999999999987 568999999 888887764 3479999999987 445 49999976 4667
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++++...+|+++++.|+|||.
T Consensus 118 ~~~~~~~~~~l~~~~~~L~pgG~ 140 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKPGGV 140 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeE
Confidence 77878889999999999999974
No 70
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.44 E-value=2.2e-13 Score=107.34 Aligned_cols=94 Identities=12% Similarity=0.075 Sum_probs=78.8
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCC--CceEeeehhhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ-FVP--PADAFLFKLVF 201 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~-~~p--~~D~v~~~~vl 201 (228)
.....+|||||||+|.++..++.. ++.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 345689999999999985555544 5679999999 888887664 4689999999987 555 39999999999
Q ss_pred cCCChhHHHHHHHHHHHHhccCCC
Q 038208 202 HGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|++++++...+++++++.|+|||.
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~ 123 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGL 123 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcE
Confidence 999888889999999999999974
No 71
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.44 E-value=1.6e-13 Score=118.76 Aligned_cols=92 Identities=18% Similarity=0.251 Sum_probs=80.2
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcCCCC--------------CCeEEEeCCCCC-------C
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANLPET--------------DNLKYIAGDMFQ-------F 188 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~~--------------~rv~~~~gD~~~-------~ 188 (228)
.+..+|||||||+|.++..+++.+ |+.+++++|+ +.+++.+++. ++++++.+|+.+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 456899999999999999999987 8899999999 8888776641 699999999976 4
Q ss_pred CC--CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 189 VP--PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 189 ~p--~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++ .||+|++..++|++++. ..+|+++++.|||||.
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~ 198 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNK--LALFKEIHRVLRDGGE 198 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCCH--HHHHHHHHHHcCCCCE
Confidence 44 39999999999999875 6899999999999974
No 72
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.44 E-value=1.1e-13 Score=113.66 Aligned_cols=91 Identities=15% Similarity=0.172 Sum_probs=78.6
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC--CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVP--PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p--~~D~v~~~~ 199 (228)
+.+..+|||||||+|.++..+++. |..+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC
Confidence 356789999999999999999998 8889999999 888877654 3789999999977 554 499999999
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++|++ +. ..+|+++++.|+|||.
T Consensus 123 ~~~~~-~~--~~~l~~~~~~LkpgG~ 145 (267)
T 3kkz_A 123 AIYNI-GF--ERGLNEWRKYLKKGGY 145 (267)
T ss_dssp CGGGT-CH--HHHHHHHGGGEEEEEE
T ss_pred Cceec-CH--HHHHHHHHHHcCCCCE
Confidence 99999 33 6789999999999974
No 73
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.44 E-value=8.8e-14 Score=115.49 Aligned_cols=93 Identities=19% Similarity=0.158 Sum_probs=79.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCC-C---CC--Cce
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----------TDNLKYIAGDMFQ-F---VP--PAD 193 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----------~~rv~~~~gD~~~-~---~p--~~D 193 (228)
..+..+|||||||+|.++..++++. .+++++|+ +.+++.+++ ..++.+..+|+.+ + ++ .||
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD 132 (293)
T 3thr_A 55 QHGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFD 132 (293)
T ss_dssp HTTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeE
Confidence 3467899999999999999999984 48999999 888877642 3678999999977 4 44 499
Q ss_pred Eeeeh-hhhcCCCh-----hHHHHHHHHHHHHhccCCC
Q 038208 194 AFLFK-LVFHGLGD-----EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 194 ~v~~~-~vlh~~~d-----~~~~~il~~~~~aL~pgG~ 225 (228)
+|++. +++|++++ ++..++|+++++.|+|||.
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 170 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGL 170 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEE
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeE
Confidence 99998 89999988 7789999999999999974
No 74
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.43 E-value=1e-12 Score=101.84 Aligned_cols=93 Identities=18% Similarity=0.284 Sum_probs=81.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCC--CceEeeeh-hhhcCC
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-TDNLKYIAGDMFQ-FVP--PADAFLFK-LVFHGL 204 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~-~~p--~~D~v~~~-~vlh~~ 204 (228)
+.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .+|+|++. .++|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGS
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhc
Confidence 356789999999999999999987 568999999 888887765 5679999999987 555 49999998 899999
Q ss_pred ChhHHHHHHHHHHHHhccCCC
Q 038208 205 GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 205 ~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++...+|+++++.|+|||.
T Consensus 122 ~~~~~~~~l~~~~~~l~~~G~ 142 (195)
T 3cgg_A 122 AEDGREPALANIHRALGADGR 142 (195)
T ss_dssp CHHHHHHHHHHHHHHEEEEEE
T ss_pred ChHHHHHHHHHHHHHhCCCCE
Confidence 888889999999999999974
No 75
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.43 E-value=1.3e-13 Score=114.10 Aligned_cols=89 Identities=22% Similarity=0.386 Sum_probs=77.4
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-C-CC--CceEeeehhh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-F-VP--PADAFLFKLV 200 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~-~p--~~D~v~~~~v 200 (228)
+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ .++++++.+|+.+ + ++ .||+|++..+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 4679999999999999999998 678999999 888887764 2789999999987 3 33 4999999999
Q ss_pred hcCCChhHHHHHHHHHHHHhccCCC
Q 038208 201 FHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+|++++. ..+|+++++.|+|||.
T Consensus 146 l~~~~~~--~~~l~~~~~~LkpgG~ 168 (285)
T 4htf_A 146 LEWVADP--RSVLQTLWSVLRPGGV 168 (285)
T ss_dssp GGGCSCH--HHHHHHHHHTEEEEEE
T ss_pred hhcccCH--HHHHHHHHHHcCCCeE
Confidence 9999876 6899999999999974
No 76
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.42 E-value=2.7e-13 Score=108.48 Aligned_cols=93 Identities=13% Similarity=0.230 Sum_probs=78.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCC-CCC--CceEe
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----------TDNLKYIAGDMFQ-FVP--PADAF 195 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----------~~rv~~~~gD~~~-~~p--~~D~v 195 (228)
+.+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 456789999999999999999998 679999999 777776543 2368999999987 554 49999
Q ss_pred eehhhhcCCCh-hHHHHHHHHHHHHhccCCC
Q 038208 196 LFKLVFHGLGD-EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~~vlh~~~d-~~~~~il~~~~~aL~pgG~ 225 (228)
++..++|++++ ++...+|+++++.|+|||.
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~ 136 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAY 136 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeE
Confidence 99999999975 4567899999999999974
No 77
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.42 E-value=4.2e-13 Score=108.04 Aligned_cols=92 Identities=20% Similarity=0.339 Sum_probs=78.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCC-CceEeeehh-hh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ-FVP-PADAFLFKL-VF 201 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~-~~p-~~D~v~~~~-vl 201 (228)
+....+|||||||+|.++..+++. .+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .+|+|++.. ++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSL 107 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGG
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCch
Confidence 445689999999999999999887 78999999 888887764 3689999999977 455 499999986 88
Q ss_pred cCC-ChhHHHHHHHHHHHHhccCCC
Q 038208 202 HGL-GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~-~d~~~~~il~~~~~aL~pgG~ 225 (228)
|++ ++++...+|+++++.|+|||.
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~pgG~ 132 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTDGGK 132 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeE
Confidence 887 567788999999999999974
No 78
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.42 E-value=3.6e-13 Score=108.46 Aligned_cols=91 Identities=13% Similarity=0.130 Sum_probs=78.1
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCC-CceEeeehh-hhcC
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ-FVP-PADAFLFKL-VFHG 203 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~-~~p-~~D~v~~~~-vlh~ 203 (228)
+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++.. ++|+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccccc
Confidence 5689999999999999999998 468999999 888887764 2389999999987 454 599999998 9999
Q ss_pred CC-hhHHHHHHHHHHHHhccCCC
Q 038208 204 LG-DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~-d~~~~~il~~~~~aL~pgG~ 225 (228)
++ +++...+|+++++.|+|||.
T Consensus 115 ~~~~~~~~~~l~~~~~~L~pgG~ 137 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLKEGGV 137 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcE
Confidence 85 46778999999999999974
No 79
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.42 E-value=9.7e-14 Score=106.10 Aligned_cols=89 Identities=22% Similarity=0.415 Sum_probs=77.2
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCCCCC--CceEeeehhhhcCCCh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-TDNLKYIAGDMFQFVP--PADAFLFKLVFHGLGD 206 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~~~p--~~D~v~~~~vlh~~~d 206 (228)
..+..+|||||||+|.++..+++++. +++++|+ +.+++.+++ .++++++.+| .+++ .||+|++..++|++++
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~~~~~l~~~~~ 90 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFILFANSFHDMDD 90 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEEEESCSTTCSC
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEEEccchhcccC
Confidence 56678999999999999999999874 8999999 888887765 6799999999 4444 4999999999999976
Q ss_pred hHHHHHHHHHHHHhccCCC
Q 038208 207 EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 207 ~~~~~il~~~~~aL~pgG~ 225 (228)
. ..+++++++.|+|||.
T Consensus 91 ~--~~~l~~~~~~L~pgG~ 107 (170)
T 3i9f_A 91 K--QHVISEVKRILKDDGR 107 (170)
T ss_dssp H--HHHHHHHHHHEEEEEE
T ss_pred H--HHHHHHHHHhcCCCCE
Confidence 5 6899999999999974
No 80
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.40 E-value=1.3e-12 Score=102.89 Aligned_cols=96 Identities=16% Similarity=0.171 Sum_probs=80.3
Q ss_pred HHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCC---CC
Q 038208 122 VVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFV---PP 191 (228)
Q Consensus 122 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~---p~ 191 (228)
++. .+. ..+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ .++++++.+|+.+.+ +.
T Consensus 32 ~l~-~l~--~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 108 (204)
T 3e05_A 32 TLS-KLR--LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPD 108 (204)
T ss_dssp HHH-HTT--CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCC
T ss_pred HHH-HcC--CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCC
Confidence 344 444 56678999999999999999999999999999999 888887764 378999999997633 45
Q ss_pred ceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 192 ADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 192 ~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+|+|++...++ ....+++++.+.|+|||.
T Consensus 109 ~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~ 137 (204)
T 3e05_A 109 PDRVFIGGSGG-----MLEEIIDAVDRRLKSEGV 137 (204)
T ss_dssp CSEEEESCCTT-----CHHHHHHHHHHHCCTTCE
T ss_pred CCEEEECCCCc-----CHHHHHHHHHHhcCCCeE
Confidence 99999988776 346899999999999974
No 81
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.38 E-value=6.8e-13 Score=104.67 Aligned_cols=94 Identities=19% Similarity=0.179 Sum_probs=78.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCC--CceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQ-FVP--PADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh 202 (228)
+.+..+|||||||+|.++..+++..+. +++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..++|
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 456789999999999999999998765 8999999 888876654 3689999999987 555 499999998887
Q ss_pred CCC-------------hhHHHHHHHHHHHHhccCCC
Q 038208 203 GLG-------------DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~-------------d~~~~~il~~~~~aL~pgG~ 225 (228)
.+. .++...+|+++++.|+|||.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 154 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGR 154 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCE
Confidence 654 45668999999999999974
No 82
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.37 E-value=1.9e-13 Score=110.68 Aligned_cols=91 Identities=16% Similarity=0.113 Sum_probs=72.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC---CCC--CceEeee---
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ---FVP--PADAFLF--- 197 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~---~~p--~~D~v~~--- 197 (228)
....+|||||||+|..+..+++..|. +++++|+ |.+++.+++ ..+++++.+|... +++ .||.|++
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 46789999999999999999988774 7999999 999988764 5678999998754 344 3888764
Q ss_pred --hhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 198 --KLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 198 --~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
...++++++ ...+++++++.|||||+
T Consensus 138 ~~~~~~~~~~~--~~~~~~e~~rvLkPGG~ 165 (236)
T 3orh_A 138 PLSEETWHTHQ--FNFIKNHAFRLLKPGGV 165 (236)
T ss_dssp CCBGGGTTTHH--HHHHHHTHHHHEEEEEE
T ss_pred ecccchhhhcc--hhhhhhhhhheeCCCCE
Confidence 445555544 47899999999999974
No 83
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.37 E-value=7e-13 Score=101.74 Aligned_cols=88 Identities=13% Similarity=0.192 Sum_probs=73.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCC----CCceEeeeh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFV----PPADAFLFK 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~----p~~D~v~~~ 198 (228)
.....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ .+++ ++.+|..+.+ ..||+|++.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEEC
Confidence 45667999999999999999999999999999999 778877653 3378 8889986643 349999999
Q ss_pred hhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.++|+ ..+++++++.|+|||.
T Consensus 102 ~~~~~------~~~l~~~~~~L~~gG~ 122 (178)
T 3hm2_A 102 GGLTA------PGVFAAAWKRLPVGGR 122 (178)
T ss_dssp C-TTC------TTHHHHHHHTCCTTCE
T ss_pred CcccH------HHHHHHHHHhcCCCCE
Confidence 99986 5789999999999974
No 84
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.36 E-value=8.8e-13 Score=109.77 Aligned_cols=91 Identities=18% Similarity=0.250 Sum_probs=68.9
Q ss_pred CCCeEEEecCCCcHHHH----HHHHHCCCCeE--EEeec-hHHHhcCCC-------CCCeEE--EeCCCCC-C------C
Q 038208 133 GLGSLVDVGGGNGSFSR----IISEAFPGIKC--TVLDL-PHVVANLPE-------TDNLKY--IAGDMFQ-F------V 189 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~----~l~~~~p~~~~--~~~Dl-p~~i~~a~~-------~~rv~~--~~gD~~~-~------~ 189 (228)
+..+|||||||+|.++. .++.++|+.++ +++|. +++++.+++ .+++++ ..++..+ + +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 35689999999997654 45567788854 99999 888876643 234544 4555532 1 2
Q ss_pred C--CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 190 P--PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 190 p--~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+ .||+|+++++||+++|. .+.|+++++.|||||.
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~LkpgG~ 167 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDI--PATLKFFHSLLGTNAK 167 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCH--HHHHHHHHHTEEEEEE
T ss_pred CCCceeEEEEeeeeeecCCH--HHHHHHHHHHcCCCcE
Confidence 3 39999999999999886 5789999999999974
No 85
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.36 E-value=1.3e-12 Score=112.99 Aligned_cols=92 Identities=13% Similarity=0.081 Sum_probs=74.8
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------------CCCeEEEeCCCCC-CC----
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE---------------TDNLKYIAGDMFQ-FV---- 189 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~---------------~~rv~~~~gD~~~-~~---- 189 (228)
+....+|||||||+|..+..+++.++..+++++|+ +.+++.|++ .++|+|+.+|+++ ++
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~ 250 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERI 250 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccccc
Confidence 56778999999999999999999888778999999 666655532 2789999999988 54
Q ss_pred CCceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 190 PPADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 190 p~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
..+|+|+++.+++ + ++....|+++++.|||||.
T Consensus 251 ~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGr 283 (438)
T 3uwp_A 251 ANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGR 283 (438)
T ss_dssp HTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCE
T ss_pred CCccEEEEccccc-C--chHHHHHHHHHHcCCCCcE
Confidence 3599999988764 3 3346778999999999974
No 86
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.36 E-value=1.4e-12 Score=107.04 Aligned_cols=100 Identities=13% Similarity=0.084 Sum_probs=75.8
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--C-CCeEEEeCCCCC----CCC-
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE--T-DNLKYIAGDMFQ----FVP- 190 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~--~-~rv~~~~gD~~~----~~p- 190 (228)
..++. .+. ..+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++ . ..+..-..|+.. ..+
T Consensus 35 ~~il~-~l~--l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~ 109 (261)
T 3iv6_A 35 ENDIF-LEN--IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAG 109 (261)
T ss_dssp HHHHH-TTT--CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTT
T ss_pred HHHHH-hcC--CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCC
Confidence 44455 444 566789999999999999999987 468999999 889987764 1 122222222211 122
Q ss_pred CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 ~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++..++|++++++...+++++++.| |||.
T Consensus 110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~ 143 (261)
T 3iv6_A 110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGT 143 (261)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSE
T ss_pred CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcE
Confidence 499999999999999988899999999999 9975
No 87
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.35 E-value=3.4e-12 Score=107.17 Aligned_cols=116 Identities=19% Similarity=0.196 Sum_probs=85.3
Q ss_pred HHHHHHHHhccchhHHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------
Q 038208 105 QRFNEAMASDSEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE--------- 174 (228)
Q Consensus 105 ~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~--------- 174 (228)
+.|++.+.. .....+++ .+.....+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++
T Consensus 10 r~~~~~~k~---~l~~~~~~-~l~~~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~ 84 (313)
T 3bgv_A 10 RNFNNWMKS---VLIGEFLE-KVRQKKKRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRR 84 (313)
T ss_dssp HHHHHHHHH---HHHHHHHH-HHHHTC--CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSS
T ss_pred hhccHHHHH---HHHHHHHH-HhhhccCCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcc
Confidence 345555443 22333444 33322246789999999999999999884 6779999999 888876653
Q ss_pred ----CCCeEEEeCCCCC-C----C--C--CceEeeehhhhcCC--ChhHHHHHHHHHHHHhccCCC
Q 038208 175 ----TDNLKYIAGDMFQ-F----V--P--PADAFLFKLVFHGL--GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 175 ----~~rv~~~~gD~~~-~----~--p--~~D~v~~~~vlh~~--~d~~~~~il~~~~~aL~pgG~ 225 (228)
..+++++++|+.+ + + + .||+|++..++|+. +.++...+|+++++.|+|||.
T Consensus 85 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~ 150 (313)
T 3bgv_A 85 DSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGY 150 (313)
T ss_dssp CC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEE
T ss_pred cccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcE
Confidence 2379999999977 3 3 2 49999999999976 446678999999999999974
No 88
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.34 E-value=1.5e-12 Score=107.91 Aligned_cols=94 Identities=15% Similarity=0.068 Sum_probs=79.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CC-C--CceEeeeh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FV-P--PADAFLFK 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~-p--~~D~v~~~ 198 (228)
+.+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++ ..+++++.+|+.+ ++ + .||+|++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 356789999999999999998876 5668999999 888877654 2579999999987 55 3 39999999
Q ss_pred hhhcC--CChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHG--LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~--~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.++|+ .+.++...+|+++++.|+|||.
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~ 169 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGY 169 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEE
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCE
Confidence 99998 6677789999999999999974
No 89
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.33 E-value=1.4e-12 Score=103.04 Aligned_cols=87 Identities=17% Similarity=0.188 Sum_probs=74.6
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCC--CceEeeehhhhcCCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGI-KCTVLDL-PHVVANLPE-TDNLKYIAGDMFQ-FVP--PADAFLFKLVFHGLG 205 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~-~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh~~~ 205 (228)
.+..+|||||||+|.++..+ .. +++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|+++
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC
Confidence 36789999999999999887 45 8999999 888887765 4789999999987 555 399999999999998
Q ss_pred hhHHHHHHHHHHHHhccCCC
Q 038208 206 DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 206 d~~~~~il~~~~~aL~pgG~ 225 (228)
+. .++|+++++.|+|||.
T Consensus 110 ~~--~~~l~~~~~~L~pgG~ 127 (211)
T 2gs9_A 110 DV--ERVLLEARRVLRPGGA 127 (211)
T ss_dssp CH--HHHHHHHHHHEEEEEE
T ss_pred CH--HHHHHHHHHHcCCCCE
Confidence 65 6899999999999974
No 90
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.33 E-value=1.7e-12 Score=111.94 Aligned_cols=94 Identities=27% Similarity=0.390 Sum_probs=77.9
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------CCCeEEEeCCCCCCCC--CceEeeehh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE---------TDNLKYIAGDMFQFVP--PADAFLFKL 199 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~---------~~rv~~~~gD~~~~~p--~~D~v~~~~ 199 (228)
....+|||||||+|.++..+++++|..+++++|+ +.+++.+++ ..+++++.+|++++++ .||+|++.-
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNP 300 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECC
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECC
Confidence 3448999999999999999999999999999999 888887764 1268999999998766 499999998
Q ss_pred hhcC---CChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHG---LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~---~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+|. ..+....++++++++.|+|||.
T Consensus 301 pfh~~~~~~~~~~~~~l~~~~~~LkpgG~ 329 (375)
T 4dcm_A 301 PFHQQHALTDNVAWEMFHHARRCLKINGE 329 (375)
T ss_dssp CC-------CCHHHHHHHHHHHHEEEEEE
T ss_pred CcccCcccCHHHHHHHHHHHHHhCCCCcE
Confidence 8885 3455667899999999999974
No 91
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.33 E-value=2e-12 Score=102.82 Aligned_cols=93 Identities=15% Similarity=0.107 Sum_probs=70.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhc----CCC------CCCeEEEeCCCCC-CCC-CceEee-
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVAN----LPE------TDNLKYIAGDMFQ-FVP-PADAFL- 196 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~----a~~------~~rv~~~~gD~~~-~~p-~~D~v~- 196 (228)
..+..+|||||||+|.++..+++++|+.+++++|+ +.+++. +++ .++++++.+|+.+ +++ +.|.|.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~~ 104 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELHV 104 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEEE
Confidence 45678999999999999999999999999999999 776653 221 4589999999987 544 225554
Q ss_pred --ehhhhc--CCChhHHHHHHHHHHHHhccCCC
Q 038208 197 --FKLVFH--GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 197 --~~~vlh--~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
....+| +.++. ..+|+++++.|||||.
T Consensus 105 ~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~ 135 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSS--PEMLRGMAAVCRPGAS 135 (218)
T ss_dssp ESCCHHHHHHHHTSS--SHHHHHHHHTEEEEEE
T ss_pred EccchhhhhhhhccH--HHHHHHHHHHcCCCcE
Confidence 222232 34443 6889999999999974
No 92
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.33 E-value=3.3e-12 Score=101.45 Aligned_cols=92 Identities=20% Similarity=0.248 Sum_probs=75.0
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CC--CceEeeehhh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-F--VP--PADAFLFKLV 200 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~--~p--~~D~v~~~~v 200 (228)
+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ .++++++.+|+.+ + ++ .+|+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 467999999999999999999999999999999 888887764 3689999999986 3 44 3999998865
Q ss_pred hcCCChh-------HHHHHHHHHHHHhccCCC
Q 038208 201 FHGLGDE-------DGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~~d~-------~~~~il~~~~~aL~pgG~ 225 (228)
.+ |... ....+++++++.|+|||.
T Consensus 121 ~~-~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 151 (214)
T 1yzh_A 121 DP-WPKKRHEKRRLTYKTFLDTFKRILPENGE 151 (214)
T ss_dssp CC-CCSGGGGGGSTTSHHHHHHHHHHSCTTCE
T ss_pred CC-ccccchhhhccCCHHHHHHHHHHcCCCcE
Confidence 43 3221 125799999999999974
No 93
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.33 E-value=1.7e-13 Score=106.64 Aligned_cols=91 Identities=12% Similarity=0.065 Sum_probs=75.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCCC-ceEeeehhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVPP-ADAFLFKLV 200 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p~-~D~v~~~~v 200 (228)
+....+|||||||+|.++..++...|+.+++++|+ +.+++.+++ ..++++ .|..+ +.++ ||+|++..+
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 35688999999999999999999999999999999 889987764 225666 67655 3343 999999999
Q ss_pred hcCCChhHHHHHHHHHHHHhccCCC
Q 038208 201 FHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
||.. ++ ....+.+++++|+|||+
T Consensus 125 LHlL-~~-~~~al~~v~~~L~pggv 147 (200)
T 3fzg_A 125 LPVL-KQ-QDVNILDFLQLFHTQNF 147 (200)
T ss_dssp HHHH-HH-TTCCHHHHHHTCEEEEE
T ss_pred HHhh-hh-hHHHHHHHHHHhCCCCE
Confidence 9999 44 35666699999999975
No 94
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.33 E-value=1.6e-12 Score=103.44 Aligned_cols=89 Identities=20% Similarity=0.299 Sum_probs=74.9
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC---CCC--CceEeeehhhhcCCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ---FVP--PADAFLFKLVFHGLG 205 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~---~~p--~~D~v~~~~vlh~~~ 205 (228)
.+..+|||||||+|.++..+++. + .+++++|+ +.+++.+++. ..+++.+|+.+ +++ .||+|++..++|+++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~ 107 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEK-LDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF 107 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTT-SSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHh-CCcEEEcchhhcCCCCCCCccCEEEECChhhhcC
Confidence 45789999999999999999998 4 89999999 8888777642 24788999865 344 399999999999998
Q ss_pred hhHHHHHHHHHHHHhccCCC
Q 038208 206 DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 206 d~~~~~il~~~~~aL~pgG~ 225 (228)
+. ..+|+++++.|+|||.
T Consensus 108 ~~--~~~l~~~~~~L~~gG~ 125 (230)
T 3cc8_A 108 DP--WAVIEKVKPYIKQNGV 125 (230)
T ss_dssp CH--HHHHHHTGGGEEEEEE
T ss_pred CH--HHHHHHHHHHcCCCCE
Confidence 76 5899999999999974
No 95
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.32 E-value=3e-12 Score=118.47 Aligned_cols=92 Identities=15% Similarity=0.162 Sum_probs=81.3
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------------CCCeEEEeCCCCC-CCC--CceE
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANLPE------------TDNLKYIAGDMFQ-FVP--PADA 194 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~------------~~rv~~~~gD~~~-~~p--~~D~ 194 (228)
.+..+|||||||+|.++..+++.. |..+++++|+ +.+++.|++ ..+++++.+|+.+ +.+ .||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 467899999999999999999998 5679999999 888877643 3579999999987 444 4999
Q ss_pred eeehhhhcCCChhHHHHHHHHHHHHhccC
Q 038208 195 FLFKLVFHGLGDEDGLKILKKRREAIASN 223 (228)
Q Consensus 195 v~~~~vlh~~~d~~~~~il~~~~~aL~pg 223 (228)
|++..++|+++++....+++++++.|+||
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG 828 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK 828 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC
Confidence 99999999999998889999999999998
No 96
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.32 E-value=9.2e-13 Score=105.43 Aligned_cols=92 Identities=11% Similarity=0.126 Sum_probs=73.6
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCC----CC--CceEeeehh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQF----VP--PADAFLFKL 199 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~----~p--~~D~v~~~~ 199 (228)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.+++ ..+++++.+|+.+. ++ .+|.|++.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 567999999999999999999999999999999 888876653 46899999998652 44 389998875
Q ss_pred hhcCCChh-HH------HHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDE-DG------LKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~-~~------~~il~~~~~aL~pgG~ 225 (228)
... |+.. .. ..+++++++.|||||.
T Consensus 114 ~~p-~~~~~~~~rr~~~~~~l~~~~r~LkpGG~ 145 (218)
T 3dxy_A 114 PDP-WHKARHNKRRIVQVPFAELVKSKLQLGGV 145 (218)
T ss_dssp CCC-CCSGGGGGGSSCSHHHHHHHHHHEEEEEE
T ss_pred CCC-ccchhhhhhhhhhHHHHHHHHHHcCCCcE
Confidence 543 3322 11 2599999999999974
No 97
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.32 E-value=3.1e-12 Score=113.68 Aligned_cols=102 Identities=17% Similarity=0.169 Sum_probs=83.3
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCC-
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQ-FVP- 190 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~-~~p- 190 (228)
..+++ .+. ..+..+|||||||+|.++..+++ .+..+++++|+..+++.+++ .++|+++.+|+.+ ++|
T Consensus 148 ~~il~-~l~--~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~ 223 (480)
T 3b3j_A 148 RAILQ-NHT--DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPE 223 (480)
T ss_dssp HHHHH-TGG--GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS
T ss_pred HHHHH-hhh--hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCC
Confidence 34444 443 34568999999999999998887 57889999999557766553 3789999999988 666
Q ss_pred CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 ~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++..++|++.+++....+.++++.|+|||.
T Consensus 224 ~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~ 258 (480)
T 3b3j_A 224 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGN 258 (480)
T ss_dssp CEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEE
T ss_pred CeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCE
Confidence 49999999888888888888899999999999974
No 98
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.32 E-value=2.9e-12 Score=105.22 Aligned_cols=100 Identities=10% Similarity=0.156 Sum_probs=77.5
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hH------HHhcCCC-------CCCeEEEeCC-
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PH------VVANLPE-------TDNLKYIAGD- 184 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~------~i~~a~~-------~~rv~~~~gD- 184 (228)
.+++ .++ +.+..+|||||||+|.++..+++++ |+.+++++|+ +. +++.+++ .++++++.+|
T Consensus 34 ~l~~-~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 34 AIAE-AWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHHH-HHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred HHHH-HcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 3445 444 5677899999999999999999996 8899999999 44 6665543 2689999998
Q ss_pred CCC---CCC--CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 185 MFQ---FVP--PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 185 ~~~---~~p--~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+.. +++ .||+|++..++|++++.. .+++.+...++|||.
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~ 154 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAVCDH 154 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTTCSE
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCCCCE
Confidence 543 333 399999999999998875 367777777777863
No 99
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.32 E-value=8.7e-13 Score=112.45 Aligned_cols=103 Identities=20% Similarity=0.284 Sum_probs=83.1
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCCC-Cc
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQFVP-PA 192 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~~~p-~~ 192 (228)
..+++ .++ .....+|||||||+|.++..+++++|+.+++++|+ +.+++.+++ ..+++++.+|+++..+ .|
T Consensus 186 ~~ll~-~l~--~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~f 262 (343)
T 2pjd_A 186 QLLLS-TLT--PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRF 262 (343)
T ss_dssp HHHHH-HSC--TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCE
T ss_pred HHHHH-hcC--cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCe
Confidence 33444 443 23456999999999999999999999999999999 788877664 3457889999987434 59
Q ss_pred eEeeehhhhcC---CChhHHHHHHHHHHHHhccCCC
Q 038208 193 DAFLFKLVFHG---LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 193 D~v~~~~vlh~---~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|+|+++.++|+ ++.+...++++++++.|+|||.
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~ 298 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGE 298 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcE
Confidence 99999999986 3556678999999999999974
No 100
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.31 E-value=4e-12 Score=101.17 Aligned_cols=92 Identities=18% Similarity=0.241 Sum_probs=73.2
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CC--CceEeeehhh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-F--VP--PADAFLFKLV 200 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~--~p--~~D~v~~~~v 200 (228)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ .++++++.+|+.+ + ++ .+|.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 467999999999999999999999999999999 888877653 3689999999976 3 44 3898876543
Q ss_pred hcCCChhH-------HHHHHHHHHHHhccCCC
Q 038208 201 FHGLGDED-------GLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~~d~~-------~~~il~~~~~aL~pgG~ 225 (228)
.. |+... ...+|+++++.|+|||.
T Consensus 118 ~p-~~~~~~~~~rl~~~~~l~~~~~~LkpgG~ 148 (213)
T 2fca_A 118 DP-WPKKRHEKRRLTYSHFLKKYEEVMGKGGS 148 (213)
T ss_dssp CC-CCSGGGGGGSTTSHHHHHHHHHHHTTSCE
T ss_pred CC-CcCccccccccCcHHHHHHHHHHcCCCCE
Confidence 32 32210 25789999999999974
No 101
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.31 E-value=2e-12 Score=110.47 Aligned_cols=94 Identities=19% Similarity=0.187 Sum_probs=78.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCC-CceEeeehhhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQ-FVP-PADAFLFKLVF 201 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~-~~p-~~D~v~~~~vl 201 (228)
..+..+|||||||+|.++..++++ +..+++++|+.++++.+++ .++++++.+|+.+ +.| .+|+|++..++
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMG 126 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCB
T ss_pred cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCch
Confidence 346789999999999999999886 5679999999556665543 3789999999987 555 49999999999
Q ss_pred cCCChhHHHHHHHHHHHHhccCCC
Q 038208 202 HGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+++..+.....++++++.|+|||.
T Consensus 127 ~~~~~~~~~~~l~~~~~~LkpgG~ 150 (348)
T 2y1w_A 127 YMLFNERMLESYLHAKKYLKPSGN 150 (348)
T ss_dssp TTBTTTSHHHHHHHGGGGEEEEEE
T ss_pred hcCChHHHHHHHHHHHhhcCCCeE
Confidence 888877778889999999999974
No 102
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.30 E-value=3.9e-12 Score=105.79 Aligned_cols=90 Identities=17% Similarity=0.276 Sum_probs=74.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCCCceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FVPPADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~p~~D~v~~~~vlh 202 (228)
+....+|||||||+|.++..++.+.++.+++++|+ |++++.|++ .++|+++.+|..+ +...||+|++...
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~-- 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAAL-- 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTT--
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCC--
Confidence 56789999999999988877777778999999999 999988874 3799999999977 3235999997654
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
. ++..++++++++.|||||.
T Consensus 198 -~--~d~~~~l~el~r~LkPGG~ 217 (298)
T 3fpf_A 198 -A--EPKRRVFRNIHRYVDTETR 217 (298)
T ss_dssp -C--SCHHHHHHHHHHHCCTTCE
T ss_pred -c--cCHHHHHHHHHHHcCCCcE
Confidence 2 3347899999999999974
No 103
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.30 E-value=8e-12 Score=95.91 Aligned_cols=87 Identities=14% Similarity=0.250 Sum_probs=73.8
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCC--CceEeeehhhhcCCChh-
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQFVP--PADAFLFKLVFHGLGDE- 207 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~~p--~~D~v~~~~vlh~~~d~- 207 (228)
.+..+|||||||+|.++..++++. +++++|+ +.+++. ..+++++.+|+.++++ .||+|+++..+|..++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEECCCCccCCccc
Confidence 456799999999999999999987 9999999 888887 5789999999988665 49999999888865544
Q ss_pred ------HHHHHHHHHHHHhccCCC
Q 038208 208 ------DGLKILKKRREAIASNGE 225 (228)
Q Consensus 208 ------~~~~il~~~~~aL~pgG~ 225 (228)
+...+++++.+.+ |||.
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-pgG~ 118 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-TVGM 118 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-CSSE
T ss_pred cccCCcchHHHHHHHHhhC-CCCE
Confidence 4567899999999 8864
No 104
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.30 E-value=2.6e-12 Score=102.34 Aligned_cols=83 Identities=16% Similarity=0.154 Sum_probs=71.9
Q ss_pred CCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCC--CceEeeehhhhcCCChhHH
Q 038208 134 LGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ-FVP--PADAFLFKLVFHGLGDEDG 209 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh~~~d~~~ 209 (228)
..+|||||||+|.++..++++ +++|+ +.+++.+++. +++++.+|+.+ +++ .||+|++..++|++++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-- 118 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICFVDDP-- 118 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCH--
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhhccCH--
Confidence 789999999999999988765 99999 8888877654 89999999977 554 39999999999999765
Q ss_pred HHHHHHHHHHhccCCC
Q 038208 210 LKILKKRREAIASNGE 225 (228)
Q Consensus 210 ~~il~~~~~aL~pgG~ 225 (228)
..+|+++++.|+|||.
T Consensus 119 ~~~l~~~~~~L~pgG~ 134 (219)
T 1vlm_A 119 ERALKEAYRILKKGGY 134 (219)
T ss_dssp HHHHHHHHHHEEEEEE
T ss_pred HHHHHHHHHHcCCCcE
Confidence 6899999999999974
No 105
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.30 E-value=7.5e-12 Score=96.85 Aligned_cols=99 Identities=18% Similarity=0.341 Sum_probs=79.8
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CC--CeEEEeCCCCCCCC-
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TD--NLKYIAGDMFQFVP- 190 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~--rv~~~~gD~~~~~p- 190 (228)
.+++ .+. ..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ .. |++++.+|+.+..+
T Consensus 43 ~l~~-~~~--~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (194)
T 1dus_A 43 ILVE-NVV--VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKD 117 (194)
T ss_dssp HHHH-HCC--CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTT
T ss_pred HHHH-Hcc--cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccccc
Confidence 3444 443 446789999999999999999998 779999999 888877653 23 49999999988544
Q ss_pred -CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 -PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 -~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+|+|++..++| +..+....+++++++.|+|||.
T Consensus 118 ~~~D~v~~~~~~~-~~~~~~~~~l~~~~~~L~~gG~ 152 (194)
T 1dus_A 118 RKYNKIITNPPIR-AGKEVLHRIIEEGKELLKDNGE 152 (194)
T ss_dssp SCEEEEEECCCST-TCHHHHHHHHHHHHHHEEEEEE
T ss_pred CCceEEEECCCcc-cchhHHHHHHHHHHHHcCCCCE
Confidence 499999988887 4456678999999999999974
No 106
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.30 E-value=8.9e-12 Score=102.56 Aligned_cols=93 Identities=24% Similarity=0.372 Sum_probs=75.0
Q ss_pred CCCeEEEecCCC--cHHHHHHHH-HCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCC---C--C----Cce
Q 038208 133 GLGSLVDVGGGN--GSFSRIISE-AFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQF---V--P----PAD 193 (228)
Q Consensus 133 ~~~~vlDvGgG~--G~~~~~l~~-~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~---~--p----~~D 193 (228)
+..+|||||||+ +..+.++++ ..|+.+++++|. |.|++.++. ..+++++.+|+.++ + | .+|
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 568999999997 444555554 689999999999 999998874 24799999999873 1 1 244
Q ss_pred -----EeeehhhhcCCChhH-HHHHHHHHHHHhccCCC
Q 038208 194 -----AFLFKLVFHGLGDED-GLKILKKRREAIASNGE 225 (228)
Q Consensus 194 -----~v~~~~vlh~~~d~~-~~~il~~~~~aL~pgG~ 225 (228)
.++++.+||+.+|++ ...+|++++++|+|||.
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~ 195 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSY 195 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCE
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcE
Confidence 688999999999876 47999999999999973
No 107
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.30 E-value=1.7e-12 Score=103.07 Aligned_cols=90 Identities=17% Similarity=0.200 Sum_probs=75.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-----CC-C-ceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-----VP-P-ADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-----~p-~-~D~v~~~~vlh 202 (228)
.....+|||||||+|.++..+++. ..+++++|+ +.+++.+++..++++..+|+.+. .+ + ||+|++..++|
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 50 GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL 127 (227)
T ss_dssp HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC
T ss_pred cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh
Confidence 345689999999999999999998 668999999 88888887768888999887551 12 3 99999999999
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+++. ..+|+++++.|+|||.
T Consensus 128 -~~~~--~~~l~~~~~~L~pgG~ 147 (227)
T 3e8s_A 128 -HQDI--IELLSAMRTLLVPGGA 147 (227)
T ss_dssp -SSCC--HHHHHHHHHTEEEEEE
T ss_pred -hhhH--HHHHHHHHHHhCCCeE
Confidence 5554 6899999999999974
No 108
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.30 E-value=3.9e-12 Score=98.45 Aligned_cols=93 Identities=17% Similarity=0.268 Sum_probs=71.8
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC--CC-C-CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ--FV-P-PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~--~~-p-~~D~v~~~~ 199 (228)
+.+..+|||||||+|.++..++++ ..+++++|+ |.+++.+++ .++++++..|+.. ++ + .||+|++..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 456789999999999999999998 789999999 888888764 3789999977755 13 3 399998763
Q ss_pred -hhcC------CChhHHHHHHHHHHHHhccCCC
Q 038208 200 -VFHG------LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 -vlh~------~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.++. ...+....+|+++++.|||||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 130 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGR 130 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEE
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcE
Confidence 3322 0235567889999999999974
No 109
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.30 E-value=2.5e-12 Score=107.81 Aligned_cols=92 Identities=14% Similarity=0.119 Sum_probs=71.7
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CC-------CeEEEeCCCCC---------CCC
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TD-------NLKYIAGDMFQ---------FVP 190 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~-------rv~~~~gD~~~---------~~p 190 (228)
...+|||||||+|..+..+++. ...+++++|+ +.+++.|++ .. +++|...|+.. +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4679999999999877766654 3468999999 899988874 21 26788888722 233
Q ss_pred --CceEeeehhhhcC-CChhHHHHHHHHHHHHhccCCC
Q 038208 191 --PADAFLFKLVFHG-LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 --~~D~v~~~~vlh~-~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++..++|+ |++++...+|+++++.|||||.
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~ 164 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGK 164 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCE
Confidence 4999999999997 4555668999999999999974
No 110
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.29 E-value=4.4e-13 Score=105.68 Aligned_cols=94 Identities=20% Similarity=0.276 Sum_probs=63.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCC-------CCceEeeeh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQFV-------PPADAFLFK 198 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~~~-------p~~D~v~~~ 198 (228)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+++ ..||+|++.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 5678999999999999999999999999999999 888888875 117899999997742 349999996
Q ss_pred hhh------cCCChhHH------------------HHHHHHHHHHhccCCC
Q 038208 199 LVF------HGLGDEDG------------------LKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vl------h~~~d~~~------------------~~il~~~~~aL~pgG~ 225 (228)
..+ +.++++.. ..+++++++.|+|||.
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 159 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRA 159 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSE
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCe
Confidence 443 33333322 7889999999999975
No 111
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.29 E-value=7.8e-12 Score=99.41 Aligned_cols=91 Identities=10% Similarity=0.078 Sum_probs=70.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHH----hcCCCCCCeEEEeCCCCCC-----CC-CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVV----ANLPETDNLKYIAGDMFQF-----VP-PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i----~~a~~~~rv~~~~gD~~~~-----~p-~~D~v~~~~ 199 (228)
..+..+|||||||+|.++..+++..++.+++++|+ |.++ +.++...++.++.+|+..+ ++ .||+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~- 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD- 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEe-
Confidence 34667999999999999999999988779999999 6544 3343356899999998763 23 49999986
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+. .+++...+++++++.|||||.
T Consensus 134 ~~---~~~~~~~~l~~~~r~LkpgG~ 156 (210)
T 1nt2_A 134 IA---QKNQIEILKANAEFFLKEKGE 156 (210)
T ss_dssp CC---STTHHHHHHHHHHHHEEEEEE
T ss_pred cc---ChhHHHHHHHHHHHHhCCCCE
Confidence 22 224445679999999999973
No 112
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.29 E-value=1.9e-12 Score=104.43 Aligned_cols=93 Identities=16% Similarity=0.110 Sum_probs=73.9
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC---CCC--CceEeee-hh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ---FVP--PADAFLF-KL 199 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~---~~p--~~D~v~~-~~ 199 (228)
....+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++ .+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 4567999999999999999976544 38999999 888887764 4679999999865 355 3999998 55
Q ss_pred h--hcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 V--FHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 v--lh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
. .+++.......+++++++.|||||.
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~ 165 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGV 165 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEE
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeE
Confidence 4 4455555667889999999999974
No 113
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.28 E-value=5.8e-12 Score=98.76 Aligned_cols=89 Identities=11% Similarity=0.147 Sum_probs=74.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCC--CceEeeehhhhc
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ-FVP--PADAFLFKLVFH 202 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh 202 (228)
... +|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++. ++
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~ 103 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FC 103 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CC
T ss_pred CCC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hh
Confidence 344 9999999999999999987 569999999 888887764 3489999999987 555 49999984 34
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+++.++...+|+++++.|+|||.
T Consensus 104 ~~~~~~~~~~l~~~~~~L~pgG~ 126 (202)
T 2kw5_A 104 HLPSSLRQQLYPKVYQGLKPGGV 126 (202)
T ss_dssp CCCHHHHHHHHHHHHTTCCSSEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcE
Confidence 56777789999999999999974
No 114
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.27 E-value=3.1e-12 Score=105.63 Aligned_cols=88 Identities=18% Similarity=0.198 Sum_probs=73.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC----C---CCeEEEeCCCCCCCC--CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEA-FPGIKCTVLDL-PHVVANLPE----T---DNLKYIAGDMFQFVP--PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-p~~i~~a~~----~---~rv~~~~gD~~~~~p--~~D~v~~~~ 199 (228)
+.+..+|||+|||+|.++..+++. +|..+++++|+ +.+++.+++ . ++++++.+|+.++++ .||+|++
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~-- 185 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIA-- 185 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEE--
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEEE--
Confidence 556789999999999999999998 78999999999 888876653 2 589999999988655 3999998
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++. ..+|+++.+.|+|||.
T Consensus 186 ---~~~~~--~~~l~~~~~~LkpgG~ 206 (275)
T 1yb2_A 186 ---DIPDP--WNHVQKIASMMKPGSV 206 (275)
T ss_dssp ---CCSCG--GGSHHHHHHTEEEEEE
T ss_pred ---cCcCH--HHHHHHHHHHcCCCCE
Confidence 45544 4789999999999974
No 115
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.27 E-value=2e-12 Score=105.19 Aligned_cols=88 Identities=14% Similarity=0.243 Sum_probs=74.6
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC--CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEA-FPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVP--PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p--~~D~v~~~~ 199 (228)
..+..+|||+|||+|.++..+++. .|..+++++|+ +.+++.+++ .++++++.+|+.+.++ .+|+|++
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~-- 168 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVIL-- 168 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEE--
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEE--
Confidence 456789999999999999999999 89999999999 888887764 3569999999988665 3999987
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++. ..+++++.+.|+|||.
T Consensus 169 ---~~~~~--~~~l~~~~~~L~~gG~ 189 (255)
T 3mb5_A 169 ---DLPQP--ERVVEHAAKALKPGGF 189 (255)
T ss_dssp ---CSSCG--GGGHHHHHHHEEEEEE
T ss_pred ---CCCCH--HHHHHHHHHHcCCCCE
Confidence 34544 5789999999999974
No 116
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.27 E-value=7.8e-12 Score=103.21 Aligned_cols=94 Identities=19% Similarity=0.271 Sum_probs=77.2
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC--CceEeeehh---
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFVP--PADAFLFKL--- 199 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~p--~~D~v~~~~--- 199 (228)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ .++++++.+|++++++ .||+|+++.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCB
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCC
Confidence 3467999999999999999999999999999999 888887664 3589999999988653 499999983
Q ss_pred ----------hhcCCCh----------hHHHHHHHHHHHHhccCCC
Q 038208 200 ----------VFHGLGD----------EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 ----------vlh~~~d----------~~~~~il~~~~~aL~pgG~ 225 (228)
++++.|. +....+++++.+.|+|||.
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~ 233 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGF 233 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEE
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCE
Confidence 4444432 3457899999999999974
No 117
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.26 E-value=3.8e-12 Score=100.22 Aligned_cols=87 Identities=20% Similarity=0.217 Sum_probs=71.8
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC--CceEeeehhhhcC
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFVP--PADAFLFKLVFHG 203 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~p--~~D~v~~~~vlh~ 203 (228)
+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|+++.+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF--- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS---
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc---
Confidence 367999999999999999999999999999999 888876653 3459999999987433 4999997542
Q ss_pred CChhHHHHHHHHHHHHhccCCC
Q 038208 204 LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+ ...+++++++.|+|||.
T Consensus 142 -~~--~~~~l~~~~~~L~~gG~ 160 (207)
T 1jsx_A 142 -AS--LNDMVSWCHHLPGEQGR 160 (207)
T ss_dssp -SS--HHHHHHHHTTSEEEEEE
T ss_pred -CC--HHHHHHHHHHhcCCCcE
Confidence 22 36899999999999974
No 118
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.26 E-value=9.1e-12 Score=106.41 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=76.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCC--CceEeeehhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQ-FVP--PADAFLFKLV 200 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~-~~p--~~D~v~~~~v 200 (228)
..+..+|||||||+|.++..++++ +..+++++|+.++++.+++ .++|+++.+|+.+ ++| .+|+|++..+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 345789999999999999999998 6679999999657776653 4679999999988 666 4999998776
Q ss_pred hcCC-ChhHHHHHHHHHHHHhccCCC
Q 038208 201 FHGL-GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~-~d~~~~~il~~~~~aL~pgG~ 225 (228)
.|.+ ..+....+++.+.+.|+|||.
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~ 168 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGL 168 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEE
T ss_pred cccccCchhHHHHHHHHHHhCCCCCE
Confidence 5554 234457899999999999974
No 119
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.25 E-value=2.2e-11 Score=96.29 Aligned_cols=86 Identities=19% Similarity=0.212 Sum_probs=71.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---CCCceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQF---VPPADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~---~p~~D~v~~~~ 199 (228)
.....+|||||||+|.++..++++ ..+++++|+ +.+++.+++ .++++++.+|+.+. .+.||+|++..
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 556789999999999999999998 789999999 888887664 23899999999873 34699999776
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+ + .. +++++++.|+|||.
T Consensus 131 ~~----~--~~-~l~~~~~~LkpgG~ 149 (204)
T 3njr_A 131 GG----S--QA-LYDRLWEWLAPGTR 149 (204)
T ss_dssp CC----C--HH-HHHHHHHHSCTTCE
T ss_pred cc----c--HH-HHHHHHHhcCCCcE
Confidence 44 2 23 99999999999974
No 120
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.25 E-value=5.6e-12 Score=101.30 Aligned_cols=93 Identities=11% Similarity=0.034 Sum_probs=68.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec--hHHHhcC---CC------CCCeEEEeCCCCCCCCC--ceEeeeh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL--PHVVANL---PE------TDNLKYIAGDMFQFVPP--ADAFLFK 198 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl--p~~i~~a---~~------~~rv~~~~gD~~~~~p~--~D~v~~~ 198 (228)
....+|||||||+|.++..+++++|+.+++++|+ +.+++.| ++ ..+++++.+|+.. +|. +|.|.+.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~-l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES-LPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB-CCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH-hhhhccCeEEEE
Confidence 4567999999999999999999999999999999 3454443 43 3579999999976 242 3555544
Q ss_pred hhhcCCChhH------HHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDED------GLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~------~~~il~~~~~aL~pgG~ 225 (228)
.+.+.|+... ...+|+++++.|||||.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~ 134 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAH 134 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcE
Confidence 4444444321 14689999999999974
No 121
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.25 E-value=1.7e-11 Score=98.54 Aligned_cols=90 Identities=13% Similarity=0.239 Sum_probs=72.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcC----CCCCCeEEEeCCCCCC-----CC-CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANL----PETDNLKYIAGDMFQF-----VP-PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a----~~~~rv~~~~gD~~~~-----~p-~~D~v~~~~ 199 (228)
+.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+ +..++++++.+|+.++ ++ .+|+|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~--- 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY--- 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE---
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE---
Confidence 45678999999999999999999988889999999 7777544 3357899999999762 22 499998
Q ss_pred hhcCCCh-hHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGD-EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d-~~~~~il~~~~~aL~pgG~ 225 (228)
|++++ +....+++++++.|+|||.
T Consensus 149 --~~~~~~~~~~~~l~~~~~~LkpgG~ 173 (230)
T 1fbn_A 149 --EDVAQPNQAEILIKNAKWFLKKGGY 173 (230)
T ss_dssp --ECCCSTTHHHHHHHHHHHHEEEEEE
T ss_pred --EecCChhHHHHHHHHHHHhCCCCcE
Confidence 56554 3446779999999999974
No 122
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.24 E-value=6.1e-12 Score=105.75 Aligned_cols=92 Identities=15% Similarity=0.285 Sum_probs=75.0
Q ss_pred CCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC---CCC--CceEeeehhhh
Q 038208 134 LGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ---FVP--PADAFLFKLVF 201 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~---~~p--~~D~v~~~~vl 201 (228)
..+|||||||+|.++..+++++|+.+++++|+ |.+++.+++ .+|++++.+|..+ ..+ .||+|++....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 34999999999999999999999999999999 889887764 4689999999866 333 49999986555
Q ss_pred cCCChhH--HHHHHHHHHHHhccCCC
Q 038208 202 HGLGDED--GLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~~d~~--~~~il~~~~~aL~pgG~ 225 (228)
+...... ...+++++++.|+|||+
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGv 195 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGL 195 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcE
Confidence 5433222 26799999999999975
No 123
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.24 E-value=6.5e-12 Score=102.65 Aligned_cols=91 Identities=18% Similarity=0.255 Sum_probs=72.5
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCC--CceEeeehhhhcCCChh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ-FVP--PADAFLFKLVFHGLGDE 207 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh~~~d~ 207 (228)
.+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++...-.++.+|+.+ +++ .||+|++..+++++.++
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 46789999999999999999987 568999999 8888877641111388999977 554 39999998866656433
Q ss_pred HHHHHHHHHHHHhccCCC
Q 038208 208 DGLKILKKRREAIASNGE 225 (228)
Q Consensus 208 ~~~~il~~~~~aL~pgG~ 225 (228)
...+|+++++.|+|||.
T Consensus 131 -~~~~l~~~~~~LkpgG~ 147 (260)
T 2avn_A 131 -KDKAFSEIRRVLVPDGL 147 (260)
T ss_dssp -HHHHHHHHHHHEEEEEE
T ss_pred -HHHHHHHHHHHcCCCeE
Confidence 57899999999999974
No 124
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.23 E-value=1.6e-11 Score=95.86 Aligned_cols=95 Identities=20% Similarity=0.274 Sum_probs=75.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-C-CC--CceEeee
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-F-VP--PADAFLF 197 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~-~p--~~D~v~~ 197 (228)
..+..+|||+|||+|.++..+++++ |..+++++|+ +.+++.+++ .++++++.+|+.+ + .. .||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 4566899999999999999999986 7789999999 888887764 2689999999866 2 32 4999998
Q ss_pred hhhhc-------CCChhHHHHHHHHHHHHhccCCC
Q 038208 198 KLVFH-------GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 198 ~~vlh-------~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
...+. ....+....+++++.+.|+|||.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~ 134 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGI 134 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEE
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCE
Confidence 76551 12233556799999999999974
No 125
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.22 E-value=3.9e-11 Score=93.89 Aligned_cols=91 Identities=21% Similarity=0.229 Sum_probs=71.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC--CCeEEEeechHHHhcCCCCCCeEEEeCCCCC-C-------------------
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP--GIKCTVLDLPHVVANLPETDNLKYIAGDMFQ-F------------------- 188 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p--~~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~-~------------------- 188 (228)
+.+..+|||||||+|.++..+++++| +.+++++|+.++. ..++++++.+|+.+ +
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~ 95 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVD 95 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----CCTTCEEEECCTTTTSSCCC-----------CHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----CCCCceEEEccccchhhhhhccccccccccchhhH
Confidence 35567999999999999999999998 6899999995421 24679999999977 3
Q ss_pred ------CC--CceEeeehhhhcCCC----hhH-----HHHHHHHHHHHhccCCC
Q 038208 189 ------VP--PADAFLFKLVFHGLG----DED-----GLKILKKRREAIASNGE 225 (228)
Q Consensus 189 ------~p--~~D~v~~~~vlh~~~----d~~-----~~~il~~~~~aL~pgG~ 225 (228)
++ .||+|++...+|... +.. ...+|+++++.|+|||.
T Consensus 96 ~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~ 149 (201)
T 2plw_A 96 YKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGT 149 (201)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred HHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCE
Confidence 34 499999988777531 221 13589999999999973
No 126
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.22 E-value=1.1e-11 Score=100.74 Aligned_cols=93 Identities=16% Similarity=0.159 Sum_probs=76.4
Q ss_pred CCCeEEEecCCCcHHHHHHHHH--CCCCeEEEeec-hHHHhcCCC---CC-------C----------------------
Q 038208 133 GLGSLVDVGGGNGSFSRIISEA--FPGIKCTVLDL-PHVVANLPE---TD-------N---------------------- 177 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~--~p~~~~~~~Dl-p~~i~~a~~---~~-------r---------------------- 177 (228)
...+|||+|||+|.++..+++. +|..+++++|+ +.+++.+++ .. +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4579999999999999999998 78889999999 888887763 22 2
Q ss_pred ---eE-------------EEeCCCCCCC------C--CceEeeehhhhcCCC-------hhHHHHHHHHHHHHhccCCC
Q 038208 178 ---LK-------------YIAGDMFQFV------P--PADAFLFKLVFHGLG-------DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 178 ---v~-------------~~~gD~~~~~------p--~~D~v~~~~vlh~~~-------d~~~~~il~~~~~aL~pgG~ 225 (228)
++ ++.+|++++. + .||+|+++..++... .+....+++++++.|+|||.
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 77 9999998854 3 499999987665543 26678999999999999974
No 127
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.22 E-value=3.3e-11 Score=95.43 Aligned_cols=87 Identities=16% Similarity=0.191 Sum_probs=67.7
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCC-CCC--CceEeee
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETDNLKYIAGDMFQ-FVP--PADAFLF 197 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~-~~p--~~D~v~~ 197 (228)
.++. .+. ...+..+|||||||+|.++..++ .+++++|+... +++++.+|+.+ +++ .||+|++
T Consensus 57 ~~~~-~l~-~~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 57 RIAR-DLR-QRPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL--------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp HHHH-HHH-TSCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS--------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred HHHH-HHh-ccCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC--------CceEEEeccccCCCCCCCEeEEEE
Confidence 3444 443 13456899999999999998873 67999998332 67889999987 555 3999999
Q ss_pred hhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 198 KLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 198 ~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
..++| +.+ ...+|+++++.|+|||.
T Consensus 122 ~~~l~-~~~--~~~~l~~~~~~L~~gG~ 146 (215)
T 2zfu_A 122 CLSLM-GTN--IRDFLEEANRVLKPGGL 146 (215)
T ss_dssp ESCCC-SSC--HHHHHHHHHHHEEEEEE
T ss_pred ehhcc-ccC--HHHHHHHHHHhCCCCeE
Confidence 99998 443 47899999999999974
No 128
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.22 E-value=3.9e-11 Score=102.15 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=74.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCC--CceEeeehhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQ-FVP--PADAFLFKLV 200 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~-~~p--~~D~v~~~~v 200 (228)
..+..+|||||||+|.++..++++ +..+++++|+.++++.+++ .++++++.+|+.+ ++| .+|+|++..+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 456789999999999999999987 4568999999557776653 3799999999987 566 4999998774
Q ss_pred hcCC-ChhHHHHHHHHHHHHhccCCC
Q 038208 201 FHGL-GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~-~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+.+ .......+|+++.+.|+|||.
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~ 166 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGS 166 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcE
Confidence 3333 233456799999999999974
No 129
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.21 E-value=2.4e-11 Score=98.20 Aligned_cols=93 Identities=14% Similarity=0.165 Sum_probs=70.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCC------------CCCCeEEEeCCCCC--C--CC--Cc
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLP------------ETDNLKYIAGDMFQ--F--VP--PA 192 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~------------~~~rv~~~~gD~~~--~--~p--~~ 192 (228)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.++ ...+|+++.+|+.+ + ++ .+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 4567999999999999999999999999999999 77776442 24689999999976 2 44 38
Q ss_pred eEeeehhhhcCCChh---H----HHHHHHHHHHHhccCCC
Q 038208 193 DAFLFKLVFHGLGDE---D----GLKILKKRREAIASNGE 225 (228)
Q Consensus 193 D~v~~~~vlh~~~d~---~----~~~il~~~~~aL~pgG~ 225 (228)
|.|++...-. |... . ...+|+++++.|+|||.
T Consensus 125 D~v~~~~~dp-~~k~~h~krr~~~~~~l~~~~~~LkpGG~ 163 (235)
T 3ckk_A 125 TKMFFLFPDP-HFKRTKHKWRIISPTLLAEYAYVLRVGGL 163 (235)
T ss_dssp EEEEEESCC------------CCCHHHHHHHHHHEEEEEE
T ss_pred eEEEEeCCCc-hhhhhhhhhhhhhHHHHHHHHHHCCCCCE
Confidence 9987654322 2110 1 13699999999999974
No 130
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.21 E-value=2.7e-11 Score=100.61 Aligned_cols=91 Identities=18% Similarity=0.218 Sum_probs=72.9
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC-Cc---eEeeeh--
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVP-PA---DAFLFK-- 198 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p-~~---D~v~~~-- 198 (228)
...+|||||||+|.++..+++. |+.+++++|+ +.+++.+++ .++++++.+|++++++ .| |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPP 201 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCC
Confidence 5579999999999999999999 9999999999 888887764 3479999999998654 48 999986
Q ss_pred ----------hhhcCCCh------hHHHHHHHHHH-HHhccCCC
Q 038208 199 ----------LVFHGLGD------EDGLKILKKRR-EAIASNGE 225 (228)
Q Consensus 199 ----------~vlh~~~d------~~~~~il~~~~-~aL~pgG~ 225 (228)
.+. +.+. ++...+++++. +.|+|||.
T Consensus 202 yi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~ 244 (284)
T 1nv8_A 202 YVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKI 244 (284)
T ss_dssp CBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCE
T ss_pred CCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCE
Confidence 233 2221 11237899999 99999974
No 131
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.21 E-value=9.1e-12 Score=98.03 Aligned_cols=89 Identities=12% Similarity=0.173 Sum_probs=73.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC-CceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFVP-PADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~p-~~D~v~~~~vlh 202 (228)
..+..+|||||||+|.++..+++ .+..+++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++..++|
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAE 136 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHH
T ss_pred ccCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHH
Confidence 35678999999999999999876 57779999999 888877664 2349999999987544 599999988776
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+ ...+++++++.|+|||.
T Consensus 137 ~-----~~~~l~~~~~~L~~gG~ 154 (205)
T 3grz_A 137 I-----LLDLIPQLDSHLNEDGQ 154 (205)
T ss_dssp H-----HHHHGGGSGGGEEEEEE
T ss_pred H-----HHHHHHHHHHhcCCCCE
Confidence 4 36889999999999974
No 132
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.21 E-value=9.7e-12 Score=100.14 Aligned_cols=90 Identities=11% Similarity=0.224 Sum_probs=74.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC-----CceEeee
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVP-----PADAFLF 197 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p-----~~D~v~~ 197 (228)
..+..+|||||||+|..+..+++.+|..+++++|+ +.+++.+++ .++|+++.+|+.+..+ .||+|++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 45678999999999999999999889999999999 888887764 3589999999987322 4999986
Q ss_pred hhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 198 KLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 198 ~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
... .+....+++++.+.|+|||.
T Consensus 149 ~~~-----~~~~~~~l~~~~~~LkpgG~ 171 (232)
T 3ntv_A 149 DAA-----KAQSKKFFEIYTPLLKHQGL 171 (232)
T ss_dssp ETT-----SSSHHHHHHHHGGGEEEEEE
T ss_pred cCc-----HHHHHHHHHHHHHhcCCCeE
Confidence 532 33356799999999999974
No 133
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.20 E-value=3e-11 Score=95.34 Aligned_cols=85 Identities=14% Similarity=0.160 Sum_probs=72.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC---CceEeeehhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFVP---PADAFLFKLV 200 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~p---~~D~v~~~~v 200 (228)
..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ .++++++.+|..+..+ .||+|++..+
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAA 152 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccc
Confidence 466789999999999999999998 678999999 888877764 3579999999987432 4999999999
Q ss_pred hcCCChhHHHHHHHHHHHHhccCCC
Q 038208 201 FHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+|++++ ++++.|+|||.
T Consensus 153 ~~~~~~--------~~~~~L~pgG~ 169 (210)
T 3lbf_A 153 PPEIPT--------ALMTQLDEGGI 169 (210)
T ss_dssp CSSCCT--------HHHHTEEEEEE
T ss_pred hhhhhH--------HHHHhcccCcE
Confidence 998886 47889999963
No 134
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.20 E-value=1.4e-11 Score=100.32 Aligned_cols=90 Identities=11% Similarity=0.123 Sum_probs=74.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---CC---CceEe
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQF---VP---PADAF 195 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~---~p---~~D~v 195 (228)
..+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.+++ .++|+++.+|+.+. ++ .||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 45678999999999999999999998 889999999 888877664 46899999998652 22 59999
Q ss_pred eehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 196 LFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++.. +.+....+|+++.+.|+|||.
T Consensus 141 ~~d~-----~~~~~~~~l~~~~~~LkpGG~ 165 (248)
T 3tfw_A 141 FIDA-----DKPNNPHYLRWALRYSRPGTL 165 (248)
T ss_dssp EECS-----CGGGHHHHHHHHHHTCCTTCE
T ss_pred EECC-----chHHHHHHHHHHHHhcCCCeE
Confidence 8743 344557899999999999974
No 135
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.20 E-value=2.6e-12 Score=104.68 Aligned_cols=92 Identities=17% Similarity=0.179 Sum_probs=74.1
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CC--------------------------------
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE---TD-------------------------------- 176 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~---~~-------------------------------- 176 (228)
+..+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 457899999999999999998866 68999999 888877653 11
Q ss_pred Ce-EEEeCCCCCC-C--C----CceEeeehhhhcCCCh--hHHHHHHHHHHHHhccCCC
Q 038208 177 NL-KYIAGDMFQF-V--P----PADAFLFKLVFHGLGD--EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 177 rv-~~~~gD~~~~-~--p----~~D~v~~~~vlh~~~d--~~~~~il~~~~~aL~pgG~ 225 (228)
++ +++.+|+.+. . + .||+|++..+||+.++ ++...+|+++++.|+|||.
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~ 193 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGF 193 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcE
Confidence 28 9999999772 1 2 3999999999995433 3568999999999999974
No 136
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.20 E-value=1.1e-11 Score=103.50 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=71.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCCC---C-CceEe
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----------TDNLKYIAGDMFQFV---P-PADAF 195 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----------~~rv~~~~gD~~~~~---p-~~D~v 195 (228)
+++.+|||||||+|..+.++++..|..+++++|+ +.+++.+++ .+|++++.+|..+.+ + .||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4678999999999999999999878889999999 888877653 359999999997732 2 49999
Q ss_pred eehhhhcCCChhHH--HHHHHHHHHHhccCCC
Q 038208 196 LFKLVFHGLGDEDG--LKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~~vlh~~~d~~~--~~il~~~~~aL~pgG~ 225 (228)
++...-+.-+++.. ..++++++++|+|||+
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~ 193 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGI 193 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCE
Confidence 99655443333222 6799999999999974
No 137
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.20 E-value=3.1e-11 Score=95.57 Aligned_cols=87 Identities=15% Similarity=0.179 Sum_probs=73.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC---CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFVP---PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~p---~~D~v~~~~ 199 (228)
..+..+|||||||+|.++..+++.. |+.+++++|+ +.+++.+++ .++++++.+|+..+++ .||+|++..
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTA 154 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECC
Confidence 4567899999999999999999987 7789999999 888877764 3579999999966544 499999999
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++|++++ ++.+.|+|||.
T Consensus 155 ~~~~~~~--------~~~~~L~pgG~ 172 (215)
T 2yxe_A 155 AGPKIPE--------PLIRQLKDGGK 172 (215)
T ss_dssp BBSSCCH--------HHHHTEEEEEE
T ss_pred chHHHHH--------HHHHHcCCCcE
Confidence 9998873 77899999964
No 138
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.20 E-value=7e-11 Score=95.53 Aligned_cols=88 Identities=13% Similarity=0.115 Sum_probs=72.6
Q ss_pred CCCeEEEecCCCcHHHHHHHHH----CCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCCC--C---C--CceEeeehh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEA----FPGIKCTVLDL-PHVVANLPE-TDNLKYIAGDMFQF--V---P--PADAFLFKL 199 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~----~p~~~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~~--~---p--~~D~v~~~~ 199 (228)
+..+|||||||+|..+..+++. +|+.+++++|+ +.+++.++. .++|+++.+|+.+. + + .||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 4679999999999999999998 78999999999 888887764 57899999999763 2 2 389998765
Q ss_pred hhcCCChhHHHHHHHHHHH-HhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRRE-AIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~-aL~pgG~ 225 (228)
. |. +...+|+++++ .|+|||.
T Consensus 161 ~-~~----~~~~~l~~~~r~~LkpGG~ 182 (236)
T 2bm8_A 161 A-HA----NTFNIMKWAVDHLLEEGDY 182 (236)
T ss_dssp S-CS----SHHHHHHHHHHHTCCTTCE
T ss_pred c-hH----hHHHHHHHHHHhhCCCCCE
Confidence 4 42 34678999997 9999974
No 139
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.19 E-value=5.2e-11 Score=92.57 Aligned_cols=92 Identities=12% Similarity=0.044 Sum_probs=75.1
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCC---C-C-CceEeeehh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQF---V-P-PADAFLFKL 199 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~---~-p-~~D~v~~~~ 199 (228)
.+..+|||+|||+|.++..++++ +..+++++|+ +.+++.+++ .++++++.+|+.+. + + .||+|++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 35679999999999999988874 5668999999 888887764 36899999999762 3 2 499999988
Q ss_pred hhcCCChhHHHHHHHHHHH--HhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRRE--AIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~--aL~pgG~ 225 (228)
.+|. ..++...+++++.+ .|+|||.
T Consensus 122 p~~~-~~~~~~~~l~~~~~~~~L~pgG~ 148 (189)
T 3p9n_A 122 PYNV-DSADVDAILAALGTNGWTREGTV 148 (189)
T ss_dssp CTTS-CHHHHHHHHHHHHHSSSCCTTCE
T ss_pred CCCc-chhhHHHHHHHHHhcCccCCCeE
Confidence 8664 34566889999999 9999974
No 140
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.19 E-value=4.2e-11 Score=101.43 Aligned_cols=94 Identities=17% Similarity=0.215 Sum_probs=74.2
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCC--CceEeeehhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQ-FVP--PADAFLFKLV 200 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~-~~p--~~D~v~~~~v 200 (228)
..+..+|||||||+|.++..++++ +..+++++|+..+++.+++ .++|+++.+|+.+ ++| .+|+|++..+
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWM 114 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCC
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCc
Confidence 345679999999999999998886 5568999999667766553 4689999999987 566 4999998866
Q ss_pred hcCCC-hhHHHHHHHHHHHHhccCCC
Q 038208 201 FHGLG-DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~~-d~~~~~il~~~~~aL~pgG~ 225 (228)
.+.+. .+....+++.+.+.|+|||.
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~ 140 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVEGGL 140 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEEEEE
T ss_pred hhhcccHHHHHHHHHHHHhhcCCCeE
Confidence 55442 33346789999999999974
No 141
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.19 E-value=1.8e-12 Score=106.34 Aligned_cols=92 Identities=17% Similarity=0.157 Sum_probs=69.8
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----C-------------------------------C
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----T-------------------------------D 176 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~-------------------------------~ 176 (228)
+..+|||||||+|.++..+++..- .+++++|+ +.+++.+++ . .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 457899999999988776655421 26999999 888876542 0 1
Q ss_pred CeE-EEeCCCCCC--C-----CCceEeeehhhhcCC-C-hhHHHHHHHHHHHHhccCCC
Q 038208 177 NLK-YIAGDMFQF--V-----PPADAFLFKLVFHGL-G-DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 177 rv~-~~~gD~~~~--~-----p~~D~v~~~~vlh~~-~-d~~~~~il~~~~~aL~pgG~ 225 (228)
+++ ++.+|+.+. + +.||+|++..+||+. + .++..++|+++++.|||||.
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~ 192 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGH 192 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcE
Confidence 243 889999873 2 249999999999974 2 35667899999999999974
No 142
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.19 E-value=8.3e-11 Score=89.36 Aligned_cols=91 Identities=18% Similarity=0.249 Sum_probs=74.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeechHHHhcCCCCCCeEEEeCCCCC-C--------CC--CceEeeeh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDLPHVVANLPETDNLKYIAGDMFQ-F--------VP--PADAFLFK 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~-~--------~p--~~D~v~~~ 198 (228)
..+..+|||||||+|.++..+++.+ |+.+++++|+..+++ ..+++++.+|+.+ + ++ .||+|++.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP----IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC----CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc----cCcEEEEEcccccchhhhhhhccCCCCceeEEEEC
Confidence 3456799999999999999999995 779999999954433 3789999999987 4 55 49999999
Q ss_pred hhhcCCChhH---------HHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDED---------GLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~---------~~~il~~~~~aL~pgG~ 225 (228)
.++|...+.. ...+++++.+.|+|||.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~ 131 (180)
T 1ej0_A 96 MAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS 131 (180)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred CCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcE
Confidence 9888665431 15889999999999974
No 143
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.18 E-value=3.7e-11 Score=96.58 Aligned_cols=91 Identities=9% Similarity=0.091 Sum_probs=71.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHh----cCCCCCCeEEEeCCCCCC--CC----CceEeeeh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVA----NLPETDNLKYIAGDMFQF--VP----PADAFLFK 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~----~a~~~~rv~~~~gD~~~~--~p----~~D~v~~~ 198 (228)
+....+|||||||+|.++..+++++ |..+++++|+ |.+++ .++...+++++.+|+.++ +| .||+|++.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 4456799999999999999999986 7889999999 65443 333358899999999872 22 49999984
Q ss_pred hhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.. ..+....+++++++.|+|||.
T Consensus 155 ~~----~~~~~~~~~~~~~~~LkpgG~ 177 (233)
T 2ipx_A 155 VA----QPDQTRIVALNAHTFLRNGGH 177 (233)
T ss_dssp CC----CTTHHHHHHHHHHHHEEEEEE
T ss_pred CC----CccHHHHHHHHHHHHcCCCeE
Confidence 43 344556789999999999974
No 144
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.18 E-value=1.2e-11 Score=99.99 Aligned_cols=88 Identities=19% Similarity=0.196 Sum_probs=73.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CC----C-CceEeeeh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FV----P-PADAFLFK 198 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~----p-~~D~v~~~ 198 (228)
.+..+|||||||+|..+..+++..|+.+++++|+ +.+++.+++ ..+|+++.+|+.+ +. + .||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 4568999999999999999999999999999999 888877654 3479999999866 32 2 49999987
Q ss_pred hhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+ .+ ...+++.+++.|+|||.
T Consensus 149 ~~----~~--~~~~l~~~~~~LkpgG~ 169 (240)
T 1xdz_A 149 AV----AR--LSVLSELCLPLVKKNGL 169 (240)
T ss_dssp CC----SC--HHHHHHHHGGGEEEEEE
T ss_pred cc----CC--HHHHHHHHHHhcCCCCE
Confidence 63 22 46899999999999974
No 145
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.18 E-value=8.5e-12 Score=103.50 Aligned_cols=92 Identities=17% Similarity=0.214 Sum_probs=68.7
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--C------------C---------------------
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE--T------------D--------------------- 176 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~--~------------~--------------------- 176 (228)
+..+|||||||+|.++. ++...+..+++++|+ +.+++.+++ . .
T Consensus 71 ~~~~vLDiGcG~G~~~~-l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQL-LSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGG-TTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHH-HhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 56799999999999543 344445669999999 888875542 0 0
Q ss_pred -CeEEEeCCCCCC-------CCC--ceEeeehhhhcCCChh--HHHHHHHHHHHHhccCCC
Q 038208 177 -NLKYIAGDMFQF-------VPP--ADAFLFKLVFHGLGDE--DGLKILKKRREAIASNGE 225 (228)
Q Consensus 177 -rv~~~~gD~~~~-------~p~--~D~v~~~~vlh~~~d~--~~~~il~~~~~aL~pgG~ 225 (228)
.++++.+|+.+. ++. ||+|++..+||+.+++ +..++|+++++.|||||.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~ 210 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGH 210 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCE
Confidence 145677798762 222 9999999999985533 668999999999999974
No 146
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.18 E-value=3.3e-11 Score=98.77 Aligned_cols=95 Identities=9% Similarity=0.192 Sum_probs=73.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC--------CC-
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----------TDNLKYIAGDMFQF--------VP- 190 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----------~~rv~~~~gD~~~~--------~p- 190 (228)
.....+|||||||+|.++..+++++|..+++++|+ +.+++.+++ .++++++.+|+.+. ++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 34567999999999999999999999999999999 887776543 13699999999874 23
Q ss_pred -CceEeeehhhhcC----------------CChhHHHHHHHHHHHHhccCCC
Q 038208 191 -PADAFLFKLVFHG----------------LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 -~~D~v~~~~vlh~----------------~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|+++-..+. ........+++.+.+.|+|||.
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~ 165 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQ 165 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCE
Confidence 4999999733321 2223357899999999999974
No 147
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.17 E-value=1.6e-11 Score=106.96 Aligned_cols=99 Identities=16% Similarity=0.150 Sum_probs=74.8
Q ss_pred HHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC------CCC-
Q 038208 119 TSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ------FVP- 190 (228)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~------~~p- 190 (228)
...+++ .+. ..+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++. .+......+.. +++
T Consensus 96 ~~~l~~-~~~--~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~~ 169 (416)
T 4e2x_A 96 ARDFLA-TEL--TGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRTE 169 (416)
T ss_dssp HHHHHH-TTT--CSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHHH
T ss_pred HHHHHH-HhC--CCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccCC
Confidence 344555 454 456789999999999999999987 458999999 7888877653 33333322211 222
Q ss_pred -CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 -PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 -~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++.++||++++. ..+|+++++.|||||.
T Consensus 170 ~~fD~I~~~~vl~h~~d~--~~~l~~~~r~LkpgG~ 203 (416)
T 4e2x_A 170 GPANVIYAANTLCHIPYV--QSVLEGVDALLAPDGV 203 (416)
T ss_dssp CCEEEEEEESCGGGCTTH--HHHHHHHHHHEEEEEE
T ss_pred CCEEEEEECChHHhcCCH--HHHHHHHHHHcCCCeE
Confidence 49999999999999865 7899999999999974
No 148
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.17 E-value=1.7e-11 Score=102.78 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=72.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCC-C-C-C--CceEe
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----------TDNLKYIAGDMFQ-F-V-P--PADAF 195 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----------~~rv~~~~gD~~~-~-~-p--~~D~v 195 (228)
.+..+|||||||+|.++..+++..|..+++++|+ |.+++.+++ .+|++++.+|+.+ . . + .||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 4568999999999999999999878889999999 888876653 4789999999976 2 1 3 49999
Q ss_pred eehhhhcCCChhHH--HHHHHHHHHHhccCCC
Q 038208 196 LFKLVFHGLGDEDG--LKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~~vlh~~~d~~~--~~il~~~~~aL~pgG~ 225 (228)
++....+.++++.. ..++++++++|+|||+
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~ 205 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGI 205 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcE
Confidence 99877776654433 5889999999999974
No 149
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.17 E-value=3.8e-11 Score=96.66 Aligned_cols=93 Identities=19% Similarity=0.281 Sum_probs=75.3
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC---
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFVP--- 190 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~p--- 190 (228)
.+++ .++ ..+..+|||||||+|.++..+++..| .+++++|+ +.+++.+++ .++++++.+|+..+++
T Consensus 82 ~~~~-~l~--~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (235)
T 1jg1_A 82 IMLE-IAN--LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKA 157 (235)
T ss_dssp HHHH-HHT--CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHH-hcC--CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCC
Confidence 3444 444 55678999999999999999999988 89999998 888877664 3569999999855554
Q ss_pred CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 ~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++..+++++++ ++.+.|+|||.
T Consensus 158 ~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~ 184 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIPE--------PLIEQLKIGGK 184 (235)
T ss_dssp CEEEEEECSBBSSCCH--------HHHHTEEEEEE
T ss_pred CccEEEECCcHHHHHH--------HHHHhcCCCcE
Confidence 3899999999998874 57889999974
No 150
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.17 E-value=8.9e-12 Score=101.42 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=66.8
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCC----CCCC-----CceEe
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMF----QFVP-----PADAF 195 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~----~~~p-----~~D~v 195 (228)
+..+|||||||+|.++..+++++|+.+++++|+ +.+++.+++ .++++++.+|+. ++++ .||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 467999999999999999999988999999999 888887764 357999999953 3444 49999
Q ss_pred eehhhhcCCCh-------------hHHHHHHHHHHHHhccCC
Q 038208 196 LFKLVFHGLGD-------------EDGLKILKKRREAIASNG 224 (228)
Q Consensus 196 ~~~~vlh~~~d-------------~~~~~il~~~~~aL~pgG 224 (228)
++.-..|...+ +....+++++++.|||||
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG 186 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGG 186 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHT
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCC
Confidence 99866654331 112356788889999986
No 151
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.16 E-value=4.2e-11 Score=103.31 Aligned_cols=94 Identities=15% Similarity=0.125 Sum_probs=75.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCC-CceEeeehhhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQ-FVP-PADAFLFKLVF 201 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~-~~p-~~D~v~~~~vl 201 (228)
..+..+|||||||+|.++..++++. ..+++++|+..+++.+++ .++|+++.+|+.+ ++| .+|+|++..+.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCB
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChh
Confidence 3567899999999999999999983 348999999766666553 4679999999987 555 49999997777
Q ss_pred cCCCh-hHHHHHHHHHHHHhccCCC
Q 038208 202 HGLGD-EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~~d-~~~~~il~~~~~aL~pgG~ 225 (228)
|.... .....+++++.+.|+|||.
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~ 164 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGV 164 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEE
T ss_pred hcccchHHHHHHHHHHHhhCCCCeE
Confidence 76543 3456799999999999974
No 152
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.16 E-value=3.6e-11 Score=96.19 Aligned_cols=94 Identities=13% Similarity=0.195 Sum_probs=73.4
Q ss_pred ccCCCeEEEecCC-CcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCC--CCCC--CceEeeehh
Q 038208 131 FEGLGSLVDVGGG-NGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMF--QFVP--PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~--~~~p--~~D~v~~~~ 199 (228)
+.+..+||||||| +|.++..+++.. ..+++++|+ +.+++.+++ ..+++++.+|+. .+++ .||+|++.-
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 4567899999999 999999999987 788999999 888887764 238999999963 3454 499999887
Q ss_pred hhcCCChhH-----------------HHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDED-----------------GLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~-----------------~~~il~~~~~aL~pgG~ 225 (228)
.++..++.. ...+++++.+.|+|||.
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 174 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGK 174 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEE
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeE
Confidence 766544322 37899999999999974
No 153
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.16 E-value=3e-11 Score=96.27 Aligned_cols=90 Identities=10% Similarity=0.157 Sum_probs=73.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---C-----CCce
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQF---V-----PPAD 193 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~---~-----p~~D 193 (228)
..+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.+++ .++++++.+|+.+. + ..||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 45678999999999999999999998 789999999 888876653 45799999999762 1 2499
Q ss_pred EeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 194 AFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 194 ~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+|++... .+....+++++.+.|+|||.
T Consensus 136 ~v~~d~~-----~~~~~~~l~~~~~~L~pgG~ 162 (223)
T 3duw_A 136 FIFIDAD-----KQNNPAYFEWALKLSRPGTV 162 (223)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTCCTTCE
T ss_pred EEEEcCC-----cHHHHHHHHHHHHhcCCCcE
Confidence 9987543 34457899999999999974
No 154
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.16 E-value=8.7e-11 Score=102.74 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=72.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcC-------CC--------CCCeEEEeCCCC-CC--C--
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANL-------PE--------TDNLKYIAGDMF-QF--V-- 189 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a-------~~--------~~rv~~~~gD~~-~~--~-- 189 (228)
+....+|||||||+|.++..+++.++..+++++|+ +.+++.| ++ ..+|+++.+|.+ .+ +
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccc
Confidence 45678999999999999999999988889999999 7776655 32 268999988544 32 2
Q ss_pred --CCceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 190 --PPADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 190 --p~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
..||+|++.++++ . ++....|+++.+.|+|||.
T Consensus 320 ~~~~FDvIvvn~~l~--~-~d~~~~L~el~r~LKpGG~ 354 (433)
T 1u2z_A 320 LIPQCDVILVNNFLF--D-EDLNKKVEKILQTAKVGCK 354 (433)
T ss_dssp HGGGCSEEEECCTTC--C-HHHHHHHHHHHTTCCTTCE
T ss_pred ccCCCCEEEEeCccc--c-ccHHHHHHHHHHhCCCCeE
Confidence 2599999887773 2 3446788999999999974
No 155
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.16 E-value=1.9e-11 Score=99.69 Aligned_cols=88 Identities=14% Similarity=0.083 Sum_probs=72.5
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CC-----CCceEeeeh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FV-----PPADAFLFK 198 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~-----p~~D~v~~~ 198 (228)
....+|||||||+|..+..++..+|+.+++++|+ +.+++.+++ ..+|+++++|+.+ +. ..||+|+++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 3567999999999999999999999999999999 888877664 3569999999876 32 249999987
Q ss_pred hhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+ .+ ...+++.+.+.|+|||.
T Consensus 159 a~----~~--~~~ll~~~~~~LkpgG~ 179 (249)
T 3g89_A 159 AV----AP--LCVLSELLLPFLEVGGA 179 (249)
T ss_dssp SS----CC--HHHHHHHHGGGEEEEEE
T ss_pred Cc----CC--HHHHHHHHHHHcCCCeE
Confidence 54 22 25789999999999973
No 156
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.15 E-value=1.8e-11 Score=97.72 Aligned_cols=92 Identities=11% Similarity=0.130 Sum_probs=74.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC---CCC------Cc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ---FVP------PA 192 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~---~~p------~~ 192 (228)
..+..+|||||||+|..+..+++..| +.+++++|+ |.+++.+++ .++|+++.+|+.+ .++ .|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 34678999999999999999999875 889999999 888887764 3579999999844 222 49
Q ss_pred eEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 193 DAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 193 D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|+|++....+.+.+. ..+++.+ +.|+|||.
T Consensus 136 D~V~~d~~~~~~~~~--~~~~~~~-~~LkpgG~ 165 (221)
T 3u81_A 136 DMVFLDHWKDRYLPD--TLLLEKC-GLLRKGTV 165 (221)
T ss_dssp SEEEECSCGGGHHHH--HHHHHHT-TCCCTTCE
T ss_pred EEEEEcCCcccchHH--HHHHHhc-cccCCCeE
Confidence 999998877766433 4677777 99999974
No 157
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.15 E-value=3.1e-11 Score=97.97 Aligned_cols=89 Identities=18% Similarity=0.289 Sum_probs=69.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--------------CCCeEEEeCCCCCC----CC--
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE--------------TDNLKYIAGDMFQF----VP-- 190 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~--------------~~rv~~~~gD~~~~----~p-- 190 (228)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ .++++++.+|+.+. ++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 4567999999999999999999999999999999 777765431 25899999999763 33
Q ss_pred CceEeeehhhhcCCChhHH-----------HHHHHHHHHHhccCCC
Q 038208 191 PADAFLFKLVFHGLGDEDG-----------LKILKKRREAIASNGE 225 (228)
Q Consensus 191 ~~D~v~~~~vlh~~~d~~~-----------~~il~~~~~aL~pgG~ 225 (228)
.+|.|++. +++... ..+++++.+.|+|||.
T Consensus 128 ~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~ 168 (246)
T 2vdv_E 128 QLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGV 168 (246)
T ss_dssp CEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEE
T ss_pred ccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCE
Confidence 26777633 233211 4799999999999974
No 158
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.15 E-value=6.5e-11 Score=96.15 Aligned_cols=95 Identities=17% Similarity=0.240 Sum_probs=76.6
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC-CC
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEA-FPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQF-VP 190 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~-~p 190 (228)
.++. .++ +....+|||+|||+|.++..+++. .|..+++++|+ +.+++.+++ .++++++.+|+.+. ++
T Consensus 87 ~~~~-~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 87 AMVT-LLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHHH-HTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC
T ss_pred HHHH-HcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC
Confidence 3444 444 566789999999999999999999 78899999999 888876653 26899999999873 66
Q ss_pred --CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 --PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 --~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+|+|++ ++++. ..+|+++.+.|+|||.
T Consensus 164 ~~~~D~v~~-----~~~~~--~~~l~~~~~~L~~gG~ 193 (258)
T 2pwy_A 164 EAAYDGVAL-----DLMEP--WKVLEKAALALKPDRF 193 (258)
T ss_dssp TTCEEEEEE-----ESSCG--GGGHHHHHHHEEEEEE
T ss_pred CCCcCEEEE-----CCcCH--HHHHHHHHHhCCCCCE
Confidence 3999997 34444 4789999999999964
No 159
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.14 E-value=9.3e-11 Score=101.30 Aligned_cols=91 Identities=13% Similarity=0.149 Sum_probs=76.9
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCC-CC--CceEeeehhhhcC
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQF-VP--PADAFLFKLVFHG 203 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~~-~p--~~D~v~~~~vlh~ 203 (228)
+..+|||||||+|.++..++++ +.+++++|+ +.+++.+++ ..+++++.+|+.+. .+ .||+|+++..+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 5679999999999999999998 569999999 888887764 33599999999883 33 4999999999987
Q ss_pred ---CChhHHHHHHHHHHHHhccCCC
Q 038208 204 ---LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ---~~d~~~~~il~~~~~aL~pgG~ 225 (228)
...+....+++++++.|+|||.
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~ 335 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGV 335 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcCcCcE
Confidence 3456678999999999999974
No 160
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.14 E-value=1.4e-11 Score=98.70 Aligned_cols=85 Identities=9% Similarity=0.121 Sum_probs=70.8
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC--CCC---CceEeeehhhhcC
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-TDNLKYIAGDMFQ--FVP---PADAFLFKLVFHG 203 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~--~~p---~~D~v~~~~vlh~ 203 (228)
..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|+++
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~----- 118 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR----- 118 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-----
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-----
Confidence 356789999999999999999998 579999999 888887765 6789999999965 444 39999987
Q ss_pred CChhHHHHHHHHHHHHhccCCC
Q 038208 204 LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pgG~ 225 (228)
. +...+|+++++.|+|||.
T Consensus 119 -~--~~~~~l~~~~~~LkpgG~ 137 (226)
T 3m33_A 119 -R--GPTSVILRLPELAAPDAH 137 (226)
T ss_dssp -S--CCSGGGGGHHHHEEEEEE
T ss_pred -C--CHHHHHHHHHHHcCCCcE
Confidence 1 225789999999999974
No 161
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.14 E-value=3.6e-11 Score=92.82 Aligned_cols=88 Identities=20% Similarity=0.274 Sum_probs=73.6
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCC---CCceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFV---PPADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~---p~~D~v~~~~ 199 (228)
..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++ .++++++.+|+.+++ +.+|+|++..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGG 108 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECC
Confidence 4567899999999999999999987 78999999 888877654 268999999987633 3599999988
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++|++ ..+++++.+.|+|||.
T Consensus 109 ~~~~~-----~~~l~~~~~~l~~gG~ 129 (192)
T 1l3i_A 109 SGGEL-----QEILRIIKDKLKPGGR 129 (192)
T ss_dssp CTTCH-----HHHHHHHHHTEEEEEE
T ss_pred chHHH-----HHHHHHHHHhcCCCcE
Confidence 77643 6789999999999974
No 162
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.13 E-value=1e-10 Score=93.88 Aligned_cols=90 Identities=10% Similarity=0.188 Sum_probs=75.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---C--C-CceEee
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQF---V--P-PADAFL 196 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~---~--p-~~D~v~ 196 (228)
..+..+|||||||+|..+..+++.+|+.+++++|+ +.+++.+++ .++++++.+|+.+. . + .||+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 34678999999999999999999999999999999 888877664 35899999999762 2 2 499999
Q ss_pred ehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 197 FKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+....+ ....+|+++.+.|+|||.
T Consensus 132 ~~~~~~-----~~~~~l~~~~~~L~pgG~ 155 (233)
T 2gpy_A 132 IDAAKG-----QYRRFFDMYSPMVRPGGL 155 (233)
T ss_dssp EEGGGS-----CHHHHHHHHGGGEEEEEE
T ss_pred ECCCHH-----HHHHHHHHHHHHcCCCeE
Confidence 877654 346889999999999974
No 163
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.13 E-value=2.9e-11 Score=91.88 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=68.0
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCCC-------CceEeeehh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQFVP-------PADAFLFKL 199 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~~~p-------~~D~v~~~~ 199 (228)
+..+|||+|||+|.++..++++.++ ++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 6789999999999999999998776 999999 888887764 2289999999976221 499999998
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++| ...++..+.+.+ ++.|+|||.
T Consensus 119 ~~~-~~~~~~~~~~~~-~~~L~~gG~ 142 (171)
T 1ws6_A 119 PYA-MDLAALFGELLA-SGLVEAGGL 142 (171)
T ss_dssp CTT-SCTTHHHHHHHH-HTCEEEEEE
T ss_pred CCc-hhHHHHHHHHHh-hcccCCCcE
Confidence 877 222333333333 499999974
No 164
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.13 E-value=9.9e-11 Score=93.65 Aligned_cols=85 Identities=20% Similarity=0.240 Sum_probs=71.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCCCCC---CceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQFVP---PADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~~~p---~~D~v~~~~vlh 202 (228)
..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++..++|
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAP 145 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHH
Confidence 4567899999999999999999986 78999999 888877664 2289999999987433 499999999999
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++++ ++.+.|+|||.
T Consensus 146 ~~~~--------~~~~~L~pgG~ 160 (231)
T 1vbf_A 146 TLLC--------KPYEQLKEGGI 160 (231)
T ss_dssp SCCH--------HHHHTEEEEEE
T ss_pred HHHH--------HHHHHcCCCcE
Confidence 8874 57889999974
No 165
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.13 E-value=2.3e-10 Score=91.39 Aligned_cols=91 Identities=16% Similarity=0.187 Sum_probs=70.2
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcC----CCCCCeEEEeCCCCCC-----CC-CceEeeeh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANL----PETDNLKYIAGDMFQF-----VP-PADAFLFK 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a----~~~~rv~~~~gD~~~~-----~p-~~D~v~~~ 198 (228)
+.+..+|||+|||+|.++..++++. |..+++++|+ +.+++.+ +..++++++.+|+.++ .+ .+|+|++.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 3456799999999999999999985 6789999999 7555443 3357899999999772 23 49999965
Q ss_pred hhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.. .++....+++++++.|+|||.
T Consensus 151 ~~----~~~~~~~~l~~~~~~LkpgG~ 173 (227)
T 1g8a_A 151 VA----QPTQAKILIDNAEVYLKRGGY 173 (227)
T ss_dssp CC----STTHHHHHHHHHHHHEEEEEE
T ss_pred CC----CHhHHHHHHHHHHHhcCCCCE
Confidence 43 233345569999999999974
No 166
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.12 E-value=5e-11 Score=95.00 Aligned_cols=90 Identities=12% Similarity=0.081 Sum_probs=73.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---C------CCc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQF---V------PPA 192 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~---~------p~~ 192 (228)
..+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.+++ .++++++.+|+.+. . ..|
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 34678999999999999999999998 789999999 888877654 46799999998652 1 359
Q ss_pred eEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 193 DAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 193 D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|+|++.. +.+....+++++.+.|+|||.
T Consensus 142 D~v~~~~-----~~~~~~~~l~~~~~~L~pgG~ 169 (225)
T 3tr6_A 142 DLIYIDA-----DKANTDLYYEESLKLLREGGL 169 (225)
T ss_dssp EEEEECS-----CGGGHHHHHHHHHHHEEEEEE
T ss_pred cEEEECC-----CHHHHHHHHHHHHHhcCCCcE
Confidence 9998543 344557899999999999974
No 167
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.12 E-value=8.6e-12 Score=101.38 Aligned_cols=93 Identities=14% Similarity=0.062 Sum_probs=81.8
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCC-C-CceEeeehhhhcC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQFV-P-PADAFLFKLVFHG 203 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~~~-p-~~D~v~~~~vlh~ 203 (228)
..+.+|||||||.|-++..+....|+.+++++|+ +.+++.+++ ..+.++...|+.... + .+|++++.-++|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHH
Confidence 4578999999999999999999999999999999 888887764 566899999998843 4 4999999999999
Q ss_pred CChhHHHHHHHHHHHHhccCCC
Q 038208 204 LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+.+++....+ ++.++|+|+|+
T Consensus 211 Le~q~kg~g~-~ll~aL~~~~v 231 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNSPNI 231 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSCSEE
T ss_pred hhhhhhHHHH-HHHHHhCCCCE
Confidence 9988777777 99999999975
No 168
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.11 E-value=1.3e-10 Score=95.20 Aligned_cols=85 Identities=14% Similarity=0.249 Sum_probs=71.7
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCC-CCC--CceEeeehhhhcCCCh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-TDNLKYIAGDMFQ-FVP--PADAFLFKLVFHGLGD 206 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh~~~d 206 (228)
....+|||||||+|.++..+++..|..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 4567999999999999999999998899999999 888887765 5789999999976 554 49999986553
Q ss_pred hHHHHHHHHHHHHhccCCC
Q 038208 207 EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 207 ~~~~~il~~~~~aL~pgG~ 225 (228)
..++++++.|+|||.
T Consensus 159 ----~~l~~~~~~L~pgG~ 173 (269)
T 1p91_A 159 ----CKAEELARVVKPGGW 173 (269)
T ss_dssp ----CCHHHHHHHEEEEEE
T ss_pred ----hhHHHHHHhcCCCcE
Confidence 248999999999974
No 169
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.11 E-value=1.1e-10 Score=98.26 Aligned_cols=87 Identities=14% Similarity=0.272 Sum_probs=72.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCC---CCceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFV---PPADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~---p~~D~v~~~~ 199 (228)
..+..+|||||||+|.++..+++..+ +.+++++|+ +.+++.+++ .++++++.+|+.+.. ..||+|++..
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~ 152 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTV 152 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECS
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcC
Confidence 45678999999999999999999987 488999999 888877664 356999999998732 2499999999
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++|+.+ +++.+.|||||.
T Consensus 153 ~~~~~~--------~~~~~~LkpgG~ 170 (317)
T 1dl5_A 153 GVDEVP--------ETWFTQLKEGGR 170 (317)
T ss_dssp BBSCCC--------HHHHHHEEEEEE
T ss_pred CHHHHH--------HHHHHhcCCCcE
Confidence 999887 467889999974
No 170
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.11 E-value=5e-11 Score=96.75 Aligned_cols=90 Identities=12% Similarity=0.142 Sum_probs=73.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC--C-C------CCc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ--F-V------PPA 192 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~--~-~------p~~ 192 (228)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ .++|+++.+|..+ + + ..|
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 34678999999999999999999986 789999999 788877764 4689999999976 2 2 359
Q ss_pred eEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 193 DAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 193 D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|+|++... .+....+++++.+.|+|||.
T Consensus 138 D~V~~d~~-----~~~~~~~l~~~~~~LkpGG~ 165 (242)
T 3r3h_A 138 DFIFIDAD-----KTNYLNYYELALKLVTPKGL 165 (242)
T ss_dssp EEEEEESC-----GGGHHHHHHHHHHHEEEEEE
T ss_pred eEEEEcCC-----hHHhHHHHHHHHHhcCCCeE
Confidence 99987543 34456789999999999974
No 171
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.11 E-value=1.1e-10 Score=93.58 Aligned_cols=90 Identities=10% Similarity=0.030 Sum_probs=75.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC---CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVP---PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p---~~D~v~~~~ 199 (228)
.++..+|+|||||+|.++..+++.+|..+++++|+ |..++.|++ .++|++..+|.+++++ .||+|++..
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 34567999999999999999999999999999999 888887764 4689999999998665 399998765
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
+ .-+....||..+.+.|+|+|
T Consensus 93 ~----Gg~~i~~Il~~~~~~L~~~~ 113 (225)
T 3kr9_A 93 M----GGRLIARILEEGLGKLANVE 113 (225)
T ss_dssp E----CHHHHHHHHHHTGGGCTTCC
T ss_pred C----ChHHHHHHHHHHHHHhCCCC
Confidence 4 23446789999999999874
No 172
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.10 E-value=5.8e-11 Score=95.08 Aligned_cols=86 Identities=7% Similarity=0.098 Sum_probs=70.1
Q ss_pred CeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------C-CCeEEEeCCCCC---CC-C-CceEeeehh
Q 038208 135 GSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------T-DNLKYIAGDMFQ---FV-P-PADAFLFKL 199 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~-~rv~~~~gD~~~---~~-p-~~D~v~~~~ 199 (228)
.+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ . ++|+++.+|..+ .+ + .||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 3999999999999999999985 789999999 888877764 3 689999999866 23 2 499998754
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
. ......+++++.+.|+|||.
T Consensus 138 ~-----~~~~~~~l~~~~~~LkpGG~ 158 (221)
T 3dr5_A 138 S-----PMDLKALVDAAWPLLRRGGA 158 (221)
T ss_dssp C-----TTTHHHHHHHHHHHEEEEEE
T ss_pred c-----HHHHHHHHHHHHHHcCCCcE
Confidence 2 23346789999999999974
No 173
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.10 E-value=1.3e-10 Score=94.92 Aligned_cols=94 Identities=15% Similarity=0.234 Sum_probs=73.4
Q ss_pred cc-CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---CC--CceEee
Q 038208 131 FE-GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQF---VP--PADAFL 196 (228)
Q Consensus 131 ~~-~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~---~p--~~D~v~ 196 (228)
.. +..+|||||||+|.++..++++.+. +++++|+ +.+++.+++ .++++++.+|+.+. ++ .||+|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 45 6789999999999999999999776 9999999 888877664 45899999999872 33 499999
Q ss_pred ehhhhcCC------------------ChhHHHHHHHHHHHHhccCCC
Q 038208 197 FKLVFHGL------------------GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~------------------~d~~~~~il~~~~~aL~pgG~ 225 (228)
++-.++.. .......+++.+.+.|+|||.
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~ 171 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGK 171 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEE
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcE
Confidence 96443322 113346799999999999974
No 174
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.10 E-value=6.9e-11 Score=94.44 Aligned_cols=90 Identities=9% Similarity=0.066 Sum_probs=73.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---C------CCc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQF---V------PPA 192 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~---~------p~~ 192 (228)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ .++++++.+|+.+. + ..|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 45678999999999999999999987 789999999 888877653 36899999998652 2 359
Q ss_pred eEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 193 DAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 193 D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|+|++.. +......+++++.+.|+|||.
T Consensus 147 D~v~~d~-----~~~~~~~~l~~~~~~L~pgG~ 174 (229)
T 2avd_A 147 DVAVVDA-----DKENCSAYYERCLQLLRPGGI 174 (229)
T ss_dssp EEEEECS-----CSTTHHHHHHHHHHHEEEEEE
T ss_pred cEEEECC-----CHHHHHHHHHHHHHHcCCCeE
Confidence 9998843 234457889999999999974
No 175
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.10 E-value=1.1e-10 Score=97.06 Aligned_cols=100 Identities=20% Similarity=0.346 Sum_probs=74.5
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVP 190 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p 190 (228)
..+++ .++ ..+..+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 18 ~~i~~-~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 18 NSIID-KAA--LRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp HHHHH-HTC--CCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC
T ss_pred HHHHH-hcC--CCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch
Confidence 34455 444 4567899999999999999999985 48999999 788876653 2589999999988 677
Q ss_pred CceEeeehhhhcCCChhHHHHHHH--------------HH--HHHhccCCC
Q 038208 191 PADAFLFKLVFHGLGDEDGLKILK--------------KR--REAIASNGE 225 (228)
Q Consensus 191 ~~D~v~~~~vlh~~~d~~~~~il~--------------~~--~~aL~pgG~ 225 (228)
.+|+|+++... +|..+....+|. ++ +.+++|||.
T Consensus 93 ~fD~vv~nlpy-~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~ 142 (285)
T 1zq9_A 93 FFDTCVANLPY-QISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDK 142 (285)
T ss_dssp CCSEEEEECCG-GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCT
T ss_pred hhcEEEEecCc-ccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCc
Confidence 89998885443 465555555553 23 368899974
No 176
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.09 E-value=1.3e-10 Score=89.08 Aligned_cols=85 Identities=15% Similarity=0.144 Sum_probs=70.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC--CceEeeehhhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFVP--PADAFLFKLVF 201 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~p--~~D~v~~~~vl 201 (228)
..+..+|||||||+|.++..+++ +..+++++|+ +.+++.+++ .++++++.+|+.++++ .+|+|++..+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFNKAFIGGT- 109 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCSEEEECSC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCcEEEECCc-
Confidence 45678999999999999999998 7889999999 888877664 2689999999987555 5999999888
Q ss_pred cCCChhHHHHHHHHHHHHhccCCC
Q 038208 202 HGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+....+++++++. |||.
T Consensus 110 -----~~~~~~l~~~~~~--~gG~ 126 (183)
T 2yxd_A 110 -----KNIEKIIEILDKK--KINH 126 (183)
T ss_dssp -----SCHHHHHHHHHHT--TCCE
T ss_pred -----ccHHHHHHHHhhC--CCCE
Confidence 2336788888888 8863
No 177
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.09 E-value=1.3e-10 Score=95.88 Aligned_cols=95 Identities=16% Similarity=0.233 Sum_probs=76.5
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC-
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEA-FPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVP- 190 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p- 190 (228)
.++. .++ +....+|||+|||+|.++..++++ .|..+++++|+ +.+++.+++ .++++++.+|+.+.++
T Consensus 103 ~i~~-~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 179 (277)
T 1o54_A 103 FIAM-MLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDE 179 (277)
T ss_dssp HHHH-HTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSC
T ss_pred HHHH-HhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccC
Confidence 3444 444 556789999999999999999999 68899999999 888877664 2689999999987655
Q ss_pred -CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 -PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 -~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++ +.++. ..+|+++.+.|+|||.
T Consensus 180 ~~~D~V~~-----~~~~~--~~~l~~~~~~L~pgG~ 208 (277)
T 1o54_A 180 KDVDALFL-----DVPDP--WNYIDKCWEALKGGGR 208 (277)
T ss_dssp CSEEEEEE-----CCSCG--GGTHHHHHHHEEEEEE
T ss_pred CccCEEEE-----CCcCH--HHHHHHHHHHcCCCCE
Confidence 4999987 34443 4789999999999974
No 178
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.09 E-value=4.6e-11 Score=96.16 Aligned_cols=90 Identities=10% Similarity=0.022 Sum_probs=77.5
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-CCC-CceEeeehhhhcC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ-FVP-PADAFLFKLVFHG 203 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~-~~p-~~D~v~~~~vlh~ 203 (228)
..+.+|||||||+|-++..+. |..+++++|+ +.+++.++. ..+.++...|... +.| .+|++++.-++|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 467899999999999999888 8999999999 888887764 5778999999987 555 4999999999999
Q ss_pred CChhHHHHHHHHHHHHhccCCC
Q 038208 204 LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+.+++....+ ++.++|+|+|+
T Consensus 181 LE~q~~~~~~-~ll~aL~~~~v 201 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLNTPRM 201 (253)
T ss_dssp HHHHSTTHHH-HHHHHCBCSEE
T ss_pred hhhhchhhHH-HHHHHhcCCCE
Confidence 9887766666 99999999865
No 179
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.08 E-value=4.4e-11 Score=98.92 Aligned_cols=94 Identities=17% Similarity=0.155 Sum_probs=74.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC---CC-CceEee
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----------TDNLKYIAGDMFQF---VP-PADAFL 196 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----------~~rv~~~~gD~~~~---~p-~~D~v~ 196 (228)
.+..+|||||||+|.++.++++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .+ .||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4578999999999999999998877889999999 888876653 46999999998762 22 499999
Q ss_pred ehhhhcCCChhH--HHHHHHHHHHHhccCCC
Q 038208 197 FKLVFHGLGDED--GLKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~~d~~--~~~il~~~~~aL~pgG~ 225 (228)
+....+..+.+. ...+++++++.|+|||+
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~ 184 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGI 184 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcE
Confidence 865444333211 25789999999999974
No 180
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.08 E-value=5.6e-11 Score=98.68 Aligned_cols=94 Identities=17% Similarity=0.165 Sum_probs=74.9
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC---CC-CceEee
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----------TDNLKYIAGDMFQF---VP-PADAFL 196 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----------~~rv~~~~gD~~~~---~p-~~D~v~ 196 (228)
.+..+|||||||+|..+..+++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .+ .||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 4568999999999999999999888899999999 888876543 36899999998762 23 499999
Q ss_pred ehhhhcCCChhHH--HHHHHHHHHHhccCCC
Q 038208 197 FKLVFHGLGDEDG--LKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~~d~~~--~~il~~~~~aL~pgG~ 225 (228)
+....+..+.+.. ..+++++++.|+|||+
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~ 187 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGY 187 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcE
Confidence 8654443333322 6899999999999974
No 181
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.08 E-value=3.2e-11 Score=92.58 Aligned_cols=90 Identities=8% Similarity=0.081 Sum_probs=70.1
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---CC-CceEeeehh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQF---VP-PADAFLFKL 199 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~---~p-~~D~v~~~~ 199 (228)
.+..+|||||||+|.++..++++ +..+++++|+ +.+++.+++ .++++++.+|+.+. .+ .||+|++..
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 45679999999999999999987 6679999999 888887664 25799999999762 22 499999876
Q ss_pred hhcCCChhHHHHHHHHHH--HHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRR--EAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~--~aL~pgG~ 225 (228)
.+|. .....+++.+. +.|+|||.
T Consensus 109 ~~~~---~~~~~~~~~l~~~~~L~~gG~ 133 (177)
T 2esr_A 109 PYAK---ETIVATIEALAAKNLLSEQVM 133 (177)
T ss_dssp SSHH---HHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCc---chHHHHHHHHHhCCCcCCCcE
Confidence 6542 23355666666 88999974
No 182
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.08 E-value=2e-10 Score=92.57 Aligned_cols=91 Identities=16% Similarity=0.184 Sum_probs=71.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHH-CCCCeEEEeec-hHHHhcCC----CCCCeEEEeCCCCCC--CC----CceEeeeh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEA-FPGIKCTVLDL-PHVVANLP----ETDNLKYIAGDMFQF--VP----PADAFLFK 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-p~~i~~a~----~~~rv~~~~gD~~~~--~p----~~D~v~~~ 198 (228)
+.+..+|||||||+|.++..+++. .|+-+++++|+ |.+++.++ +..++..+.+|...+ .+ .+|+|++.
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 567899999999999999999997 49999999999 88886654 367899999998763 22 38887643
Q ss_pred hhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+++. ++...+++++++.|||||.
T Consensus 155 --~~~~--~~~~~~l~~~~r~LKpGG~ 177 (233)
T 4df3_A 155 --VAQP--EQAAIVVRNARFFLRDGGY 177 (233)
T ss_dssp --CCCT--THHHHHHHHHHHHEEEEEE
T ss_pred --ccCC--hhHHHHHHHHHHhccCCCE
Confidence 2222 3446889999999999974
No 183
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.08 E-value=4.5e-11 Score=94.48 Aligned_cols=89 Identities=18% Similarity=0.208 Sum_probs=72.5
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC--CC-CCceEeeehh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ--FV-PPADAFLFKL 199 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~--~~-p~~D~v~~~~ 199 (228)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ .++++++.+|..+ +. ++||+|++..
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 134 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDC 134 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEET
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcC
Confidence 4678999999999999999999988 789999999 888887764 3579999999865 22 2399998763
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
. ......+++++++.|+|||.
T Consensus 135 ~-----~~~~~~~l~~~~~~LkpgG~ 155 (210)
T 3c3p_A 135 D-----VFNGADVLERMNRCLAKNAL 155 (210)
T ss_dssp T-----TSCHHHHHHHHGGGEEEEEE
T ss_pred C-----hhhhHHHHHHHHHhcCCCeE
Confidence 2 23447899999999999974
No 184
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.07 E-value=1.8e-11 Score=98.69 Aligned_cols=88 Identities=18% Similarity=0.277 Sum_probs=71.9
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC--CceEeeehhhhc
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVP--PADAFLFKLVFH 202 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p--~~D~v~~~~vlh 202 (228)
...+|||||||+|.++..+++.. .+++++|+ +.+++.+++ .++++++.+|+.+..+ .||+|++..++|
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 67899999999999999999974 88999999 888887764 2589999999987323 599999999998
Q ss_pred CCChhHHHHHHHHHHHHhccCC
Q 038208 203 GLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG 224 (228)
...+.. ..+.++++.|+|||
T Consensus 156 ~~~~~~--~~~~~~~~~L~pgG 175 (241)
T 3gdh_A 156 GPDYAT--AETFDIRTMMSPDG 175 (241)
T ss_dssp SGGGGG--SSSBCTTTSCSSCH
T ss_pred Ccchhh--hHHHHHHhhcCCcc
Confidence 766543 25667778888885
No 185
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.06 E-value=1.6e-10 Score=93.98 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=73.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC--C-C------C-C
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ--F-V------P-P 191 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~--~-~------p-~ 191 (228)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ .++|+++.+|..+ + + + .
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 34678999999999999999999988 789999999 888877653 3689999999865 2 2 2 4
Q ss_pred ceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 192 ADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 192 ~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
||+|++... ......+++++.+.|+|||.
T Consensus 157 fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~ 185 (247)
T 1sui_A 157 YDFIFVDAD-----KDNYLNYHKRLIDLVKVGGV 185 (247)
T ss_dssp BSEEEECSC-----STTHHHHHHHHHHHBCTTCC
T ss_pred EEEEEEcCc-----hHHHHHHHHHHHHhCCCCeE
Confidence 999987532 23457899999999999975
No 186
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.06 E-value=1.3e-10 Score=89.70 Aligned_cols=90 Identities=13% Similarity=0.073 Sum_probs=69.7
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCC------C-CceEee
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFV------P-PADAFL 196 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~------p-~~D~v~ 196 (228)
....+|||+|||+|.++..+++ .+..+++++|+ +.+++.+++ .++++++.+|+.+.. + .||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 3567999999999999999888 46679999999 888887764 258999999997621 2 499999
Q ss_pred ehhhhcCCChhHHHHHHHHH--HHHhccCCC
Q 038208 197 FKLVFHGLGDEDGLKILKKR--REAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~~d~~~~~il~~~--~~aL~pgG~ 225 (228)
+...+|....+ .+++.+ .+.|+|||.
T Consensus 122 ~~~~~~~~~~~---~~~~~l~~~~~L~~gG~ 149 (187)
T 2fhp_A 122 LDPPYAKQEIV---SQLEKMLERQLLTNEAV 149 (187)
T ss_dssp ECCCGGGCCHH---HHHHHHHHTTCEEEEEE
T ss_pred ECCCCCchhHH---HHHHHHHHhcccCCCCE
Confidence 98876633333 445555 778999974
No 187
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.06 E-value=2.7e-10 Score=93.72 Aligned_cols=90 Identities=20% Similarity=0.176 Sum_probs=66.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC--CC------CeEEE--eCCCCC-CCCCceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE--TD------NLKYI--AGDMFQ-FVPPADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~--~~------rv~~~--~gD~~~-~~p~~D~v~~~~ 199 (228)
+.+..+|||||||+|.++..++++ .+++++|+..++..+++ .. +++++ .+|+.+ +-..||+|++..
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~ 148 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDV 148 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeC
Confidence 345679999999999999999887 68999999445443332 12 68999 999987 322499999876
Q ss_pred hhcCCCh---h-H-HHHHHHHHHHHhccCC
Q 038208 200 VFHGLGD---E-D-GLKILKKRREAIASNG 224 (228)
Q Consensus 200 vlh~~~d---~-~-~~~il~~~~~aL~pgG 224 (228)
. +..++ + . ...+|+.+.+.|+|||
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG 177 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVKNP 177 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhccCC
Confidence 6 43322 1 1 2348999999999997
No 188
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.06 E-value=2.6e-10 Score=89.19 Aligned_cols=89 Identities=13% Similarity=0.305 Sum_probs=67.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCC--------------CCceEee
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETDNLKYIAGDMFQFV--------------PPADAFL 196 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~~~--------------p~~D~v~ 196 (228)
+.+..+|||||||+|.++..++++ ..+++++|+.++ ...++++++.+|+.+.. ..+|+|+
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vl 96 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM----EEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVV 96 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC----CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc----ccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEe
Confidence 456789999999999999999998 789999999432 22468999999998731 3699999
Q ss_pred ehhhhcC---C------ChhHHHHHHHHHHHHhccCCC
Q 038208 197 FKLVFHG---L------GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~---~------~d~~~~~il~~~~~aL~pgG~ 225 (228)
+...... + ..+.+..+|+.+.+.|+|||.
T Consensus 97 sd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~ 134 (191)
T 3dou_A 97 SDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGN 134 (191)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred cCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCE
Confidence 8542211 1 112346789999999999974
No 189
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.05 E-value=1e-10 Score=97.05 Aligned_cols=93 Identities=15% Similarity=0.194 Sum_probs=71.6
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCC----------------CCCCeEEEeCCCCCCC--C-C
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLP----------------ETDNLKYIAGDMFQFV--P-P 191 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~----------------~~~rv~~~~gD~~~~~--p-~ 191 (228)
....+|||||||+|..+..+++. |..+++++|+ |.+++.++ ..+|++++.+|..+.+ + .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 45689999999999999999998 8889999999 88877543 2468999999986521 3 4
Q ss_pred ceEeeehhhhcCCChhH--HHHHHHHHHHHhccCCC
Q 038208 192 ADAFLFKLVFHGLGDED--GLKILKKRREAIASNGE 225 (228)
Q Consensus 192 ~D~v~~~~vlh~~~d~~--~~~il~~~~~aL~pgG~ 225 (228)
||+|++....+..+.+. ...+++++++.|+|||+
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~ 188 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGI 188 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcE
Confidence 99999866544322222 26789999999999974
No 190
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.05 E-value=7.7e-11 Score=101.57 Aligned_cols=87 Identities=17% Similarity=0.107 Sum_probs=68.6
Q ss_pred CCCeEEEecCC------CcHHHHHHHHH-CCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCC--------CceEe
Q 038208 133 GLGSLVDVGGG------NGSFSRIISEA-FPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ-FVP--------PADAF 195 (228)
Q Consensus 133 ~~~~vlDvGgG------~G~~~~~l~~~-~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~-~~p--------~~D~v 195 (228)
+..+||||||| +|..+..++++ +|+.+++++|+ +.+.. ..++|+++.+|+.+ +++ .||+|
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~---~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlV 292 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV---DELRIRTIQGDQNDAEFLDRIARRYGPFDIV 292 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG---CBTTEEEEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh---cCCCcEEEEecccccchhhhhhcccCCccEE
Confidence 56899999999 66667777765 59999999999 66532 35799999999987 432 49999
Q ss_pred eehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 196 LFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
++. ..|++. +..+.|+++++.|||||.
T Consensus 293 isd-gsH~~~--d~~~aL~el~rvLKPGGv 319 (419)
T 3sso_A 293 IDD-GSHINA--HVRTSFAALFPHVRPGGL 319 (419)
T ss_dssp EEC-SCCCHH--HHHHHHHHHGGGEEEEEE
T ss_pred EEC-Ccccch--hHHHHHHHHHHhcCCCeE
Confidence 876 456554 447899999999999974
No 191
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.05 E-value=1e-10 Score=99.35 Aligned_cols=94 Identities=14% Similarity=0.155 Sum_probs=74.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCC---CCC--CceEe
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----------TDNLKYIAGDMFQ---FVP--PADAF 195 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----------~~rv~~~~gD~~~---~~p--~~D~v 195 (228)
....+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .+|++++.+|+.+ ..+ .||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 4578999999999999999999888899999999 888877653 3689999999865 233 49999
Q ss_pred eehhhhcCCChhH--HHHHHHHHHHHhccCCC
Q 038208 196 LFKLVFHGLGDED--GLKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~~vlh~~~d~~--~~~il~~~~~aL~pgG~ 225 (228)
++....+..+.+. ...+++++++.|+|||+
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~ 230 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGV 230 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcE
Confidence 9854422211221 36899999999999974
No 192
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.05 E-value=2.5e-10 Score=94.44 Aligned_cols=90 Identities=21% Similarity=0.152 Sum_probs=66.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC--CC------CeEEE--eCCCCC-CCCCceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE--TD------NLKYI--AGDMFQ-FVPPADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~--~~------rv~~~--~gD~~~-~~p~~D~v~~~~ 199 (228)
+.+..+|||||||+|.++..++++ .+++++|+..++..+++ .. +++++ .+|+.+ +-..||+|++..
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~ 156 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDI 156 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECC
Confidence 345679999999999999999987 58999999445443332 12 78999 999976 322499999887
Q ss_pred hhcCCCh----hH-HHHHHHHHHHHhccCC
Q 038208 200 VFHGLGD----ED-GLKILKKRREAIASNG 224 (228)
Q Consensus 200 vlh~~~d----~~-~~~il~~~~~aL~pgG 224 (228)
. +..+. .. ...+|+.+.+.|+|||
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG 185 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEYNQ 185 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHST
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhccCC
Confidence 6 43322 11 2348999999999997
No 193
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.05 E-value=1.7e-10 Score=93.12 Aligned_cols=90 Identities=14% Similarity=0.179 Sum_probs=73.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCC---C---------
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQF---V--------- 189 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~---~--------- 189 (228)
..+..+|||||||+|..+..+++..| ..+++++|+ +.+++.+++ .++++++.+|+.+. +
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 45678999999999999999999988 689999999 888877654 24699999998652 2
Q ss_pred --------CCceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 190 --------PPADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 190 --------p~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
..||+|++... .+....+++++.+.|+|||.
T Consensus 138 ~~~f~~~~~~fD~I~~~~~-----~~~~~~~l~~~~~~L~pgG~ 176 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDAD-----KENYPNYYPLILKLLKPGGL 176 (239)
T ss_dssp GTTTCCSTTCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEE
T ss_pred cccccCCCCCcCEEEEeCC-----HHHHHHHHHHHHHHcCCCeE
Confidence 34999987643 34456889999999999974
No 194
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.05 E-value=8.3e-11 Score=92.63 Aligned_cols=89 Identities=19% Similarity=0.214 Sum_probs=69.8
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------C--CCeEEEeCCCCCC---C--CC-ceEeee
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------T--DNLKYIAGDMFQF---V--PP-ADAFLF 197 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~--~rv~~~~gD~~~~---~--p~-~D~v~~ 197 (228)
+..+|||+|||+|.++..++++.. .+++++|+ +.+++.+++ . ++++++.+|+.+. . .. ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 467999999999999999887743 58999999 888887764 2 6899999998762 1 25 999999
Q ss_pred hhhhcCCChhHHHHHHHHH--HHHhccCCC
Q 038208 198 KLVFHGLGDEDGLKILKKR--REAIASNGE 225 (228)
Q Consensus 198 ~~vlh~~~d~~~~~il~~~--~~aL~pgG~ 225 (228)
...+| . .....+++.+ .+.|+|||.
T Consensus 132 ~~~~~-~--~~~~~~l~~~~~~~~LkpgG~ 158 (201)
T 2ift_A 132 DPPFH-F--NLAEQAISLLCENNWLKPNAL 158 (201)
T ss_dssp CCCSS-S--CHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCC-C--ccHHHHHHHHHhcCccCCCcE
Confidence 88765 3 3346778888 456999974
No 195
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.04 E-value=1.6e-10 Score=94.29 Aligned_cols=88 Identities=19% Similarity=0.315 Sum_probs=70.8
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCCC--CceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQFVP--PADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~~~p--~~D~v~~~~vlh 202 (228)
..+..+|||||||+|.++..+++..+ +++++|+ |.+++.+++ .-.+++..+|+.+.++ .||+|+++...|
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHH
Confidence 35678999999999999999998766 9999999 888877664 1128999999877543 499999865443
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
....+++++++.|+|||.
T Consensus 196 -----~~~~~l~~~~~~LkpgG~ 213 (254)
T 2nxc_A 196 -----LHAALAPRYREALVPGGR 213 (254)
T ss_dssp -----HHHHHHHHHHHHEEEEEE
T ss_pred -----HHHHHHHHHHHHcCCCCE
Confidence 347899999999999974
No 196
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.04 E-value=7.7e-11 Score=99.56 Aligned_cols=94 Identities=17% Similarity=0.165 Sum_probs=73.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC---CC-CceEee
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----------TDNLKYIAGDMFQF---VP-PADAFL 196 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----------~~rv~~~~gD~~~~---~p-~~D~v~ 196 (228)
.+..+|||||||+|..+.++++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .+ .||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 4568999999999999999999878899999999 888876542 36899999998762 23 499999
Q ss_pred ehhhhcCCChhHH--HHHHHHHHHHhccCCC
Q 038208 197 FKLVFHGLGDEDG--LKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~~d~~~--~~il~~~~~aL~pgG~ 225 (228)
+...-+..+.+.. ..+++++++.|+|||.
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~ 225 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGY 225 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcE
Confidence 8643222122221 6899999999999974
No 197
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.04 E-value=7.9e-11 Score=98.78 Aligned_cols=94 Identities=16% Similarity=0.167 Sum_probs=71.7
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC--C-C-CceEee
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----------TDNLKYIAGDMFQF--V-P-PADAFL 196 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----------~~rv~~~~gD~~~~--~-p-~~D~v~ 196 (228)
.+..+|||||||+|..+..++++.|..+++++|+ +.+++.+++ .+|++++.+|..+. . + .||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 4678999999999999999999888899999999 888876653 46899999998652 2 2 499999
Q ss_pred ehhhhcCCChh--HHHHHHHHHHHHhccCCC
Q 038208 197 FKLVFHGLGDE--DGLKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~~d~--~~~~il~~~~~aL~pgG~ 225 (228)
+....+..+.+ ....+++++++.|+|||+
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~ 204 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGV 204 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeE
Confidence 86554432221 235789999999999974
No 198
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.04 E-value=1.5e-10 Score=95.74 Aligned_cols=88 Identities=20% Similarity=0.122 Sum_probs=71.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCC-C-CceEeeehhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFV-P-PADAFLFKLV 200 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~-p-~~D~v~~~~v 200 (228)
..+..+|||+|||+|.++..+++..+. +++++|+ |.+++.+++ .++++++.+|+.+.. + .||+|++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc
Confidence 345789999999999999999999877 8999999 888877653 456999999998843 3 4999988432
Q ss_pred hcCCChhHHHHHHHHHHHHhccCCC
Q 038208 201 FHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.....+++++.+.|+|||.
T Consensus 202 ------~~~~~~l~~~~~~LkpgG~ 220 (278)
T 2frn_A 202 ------VRTHEFIPKALSIAKDGAI 220 (278)
T ss_dssp ------SSGGGGHHHHHHHEEEEEE
T ss_pred ------hhHHHHHHHHHHHCCCCeE
Confidence 2226789999999999974
No 199
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.03 E-value=7.8e-11 Score=99.21 Aligned_cols=94 Identities=19% Similarity=0.211 Sum_probs=70.1
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC---CC-CceEee
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----------TDNLKYIAGDMFQF---VP-PADAFL 196 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----------~~rv~~~~gD~~~~---~p-~~D~v~ 196 (228)
.+..+|||||||+|..+..+++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .+ .||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 4568999999999999999999888899999999 888876542 36899999998762 12 499999
Q ss_pred ehhhhcCCChhHH--HHHHHHHHHHhccCCC
Q 038208 197 FKLVFHGLGDEDG--LKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~~d~~~--~~il~~~~~aL~pgG~ 225 (228)
+...-+..+++.. ..+++++++.|+|||+
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~ 217 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGI 217 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeE
Confidence 8554332222221 6899999999999974
No 200
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.03 E-value=9.1e-11 Score=98.81 Aligned_cols=94 Identities=14% Similarity=0.142 Sum_probs=75.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCC---CC-CceEe
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----------TDNLKYIAGDMFQF---VP-PADAF 195 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----------~~rv~~~~gD~~~~---~p-~~D~v 195 (228)
....+|||||||+|..+..+++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .+ .||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 4568999999999999999999888889999999 888876543 36899999999762 23 49999
Q ss_pred eehhhhcC---CChhH--HHHHHHHHHHHhccCCC
Q 038208 196 LFKLVFHG---LGDED--GLKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~~vlh~---~~d~~--~~~il~~~~~aL~pgG~ 225 (228)
++....|. -+.+. ...+++++++.|+|||+
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~ 190 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGV 190 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcE
Confidence 99776654 11111 36889999999999974
No 201
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.02 E-value=4.3e-10 Score=96.05 Aligned_cols=95 Identities=14% Similarity=0.041 Sum_probs=75.2
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCC--CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FVP--PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~p--~~D~v~~~~ 199 (228)
+.+..+|||+|||+|.++.+++... |+.+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .+|+|+++-
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECC
Confidence 5667899999999999999999988 8999999999 888887764 2389999999987 333 489999865
Q ss_pred hhcCCCh--h----HHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGD--E----DGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d--~----~~~~il~~~~~aL~pgG~ 225 (228)
..+.... . .-..+++++.+.|+|||.
T Consensus 281 Pyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~ 312 (354)
T 3tma_A 281 PHGLRLGRKEGLFHLYWDFLRGALALLPPGGR 312 (354)
T ss_dssp CSCC----CHHHHHHHHHHHHHHHHTSCTTCE
T ss_pred CCcCccCCcccHHHHHHHHHHHHHHhcCCCcE
Confidence 5443211 1 126789999999999974
No 202
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.02 E-value=2.4e-10 Score=92.28 Aligned_cols=90 Identities=13% Similarity=0.115 Sum_probs=73.6
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC--C-C------C-C
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ--F-V------P-P 191 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~--~-~------p-~ 191 (228)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ .++|+++.+|..+ + + + .
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 45678999999999999999999988 789999999 888877653 3589999999865 2 2 2 4
Q ss_pred ceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 192 ADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 192 ~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
||+|++.. +......+++++.+.|+|||.
T Consensus 148 fD~I~~d~-----~~~~~~~~l~~~~~~L~pGG~ 176 (237)
T 3c3y_A 148 YDFGFVDA-----DKPNYIKYHERLMKLVKVGGI 176 (237)
T ss_dssp EEEEEECS-----CGGGHHHHHHHHHHHEEEEEE
T ss_pred cCEEEECC-----chHHHHHHHHHHHHhcCCCeE
Confidence 99998742 334567899999999999974
No 203
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.02 E-value=5.3e-10 Score=86.97 Aligned_cols=91 Identities=19% Similarity=0.295 Sum_probs=68.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCC---------CeEEEeechHHHhcCCCCCCeEEE-eCCCCC-C--------CC-
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPG---------IKCTVLDLPHVVANLPETDNLKYI-AGDMFQ-F--------VP- 190 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~---------~~~~~~Dlp~~i~~a~~~~rv~~~-~gD~~~-~--------~p- 190 (228)
+.+..+|||||||+|.++..++++++. .+++++|+.++. ..++++++ .+|+.+ + ++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----PLEGATFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----CCTTCEEECSCCTTSHHHHHHHHHHSGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----cCCCCeEEEeccCCCHHHHHHHHHhcCC
Confidence 356789999999999999999999865 799999995421 14679999 999876 2 23
Q ss_pred -CceEeeehhhhcC---C-ChhH-----HHHHHHHHHHHhccCCC
Q 038208 191 -PADAFLFKLVFHG---L-GDED-----GLKILKKRREAIASNGE 225 (228)
Q Consensus 191 -~~D~v~~~~vlh~---~-~d~~-----~~~il~~~~~aL~pgG~ 225 (228)
.||+|++...+|. | .+.. ...+++++++.|+|||.
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 140 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGT 140 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 4999998655442 1 2221 14789999999999974
No 204
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.02 E-value=7.1e-10 Score=89.36 Aligned_cols=91 Identities=14% Similarity=0.117 Sum_probs=68.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHH-CCCCeEEEeec-hHHH----hcCCCCCCeEEEeCCCCCC-----CC-CceEeeeh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEA-FPGIKCTVLDL-PHVV----ANLPETDNLKYIAGDMFQF-----VP-PADAFLFK 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-p~~i----~~a~~~~rv~~~~gD~~~~-----~p-~~D~v~~~ 198 (228)
+.+..+|||||||+|.++..+++. .|+.+++++|+ |.++ +.+++..++.++.+|...+ ++ .+|+|++.
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEec
Confidence 456789999999999999999987 47889999999 7654 3333357899999999763 12 49999876
Q ss_pred hhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
... +++...+++.+.+.|||||.
T Consensus 154 ~a~----~~~~~il~~~~~~~LkpGG~ 176 (232)
T 3id6_C 154 IAQ----PDQTDIAIYNAKFFLKVNGD 176 (232)
T ss_dssp CCC----TTHHHHHHHHHHHHEEEEEE
T ss_pred CCC----hhHHHHHHHHHHHhCCCCeE
Confidence 433 23334455667779999974
No 205
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.01 E-value=6.8e-10 Score=93.50 Aligned_cols=95 Identities=13% Similarity=0.126 Sum_probs=73.2
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C-CC-CceEeeeh-
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-F-VP-PADAFLFK- 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~-~p-~~D~v~~~- 198 (228)
.....+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+++++.+|+.+ + .+ .||+|++.
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 45678999999999999999999975 589999999 788877654 3579999999977 3 23 49999973
Q ss_pred -----hhhcC-------CChhH-------HHHHHHHHHHHhccCCC
Q 038208 199 -----LVFHG-------LGDED-------GLKILKKRREAIASNGE 225 (228)
Q Consensus 199 -----~vlh~-------~~d~~-------~~~il~~~~~aL~pgG~ 225 (228)
.+++. |+.++ ...+|+++.+.|||||.
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~ 241 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGI 241 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 23332 33322 25899999999999974
No 206
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.01 E-value=4.6e-10 Score=96.54 Aligned_cols=92 Identities=21% Similarity=0.250 Sum_probs=70.4
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC-------CCCeEEEeCCCCC-CCCC-ceEeeehhhhcC
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE-------TDNLKYIAGDMFQ-FVPP-ADAFLFKLVFHG 203 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~-------~~rv~~~~gD~~~-~~p~-~D~v~~~~vlh~ 203 (228)
+.++|||||||+|.++...+++. ..+++++|...+++.|++ .++|+++.+|+.+ ++|+ +|+|++-+.-+.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccccc
Confidence 46799999999999988777753 357999998656665553 6889999999987 6774 999987555444
Q ss_pred CChh-HHHHHHHHHHHHhccCCC
Q 038208 204 LGDE-DGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~d~-~~~~il~~~~~aL~pgG~ 225 (228)
...+ ....++....+.|+|||.
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~ 184 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGL 184 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEE
T ss_pred ccccchhhhHHHHHHhhCCCCce
Confidence 3323 456778888899999974
No 207
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.01 E-value=3.3e-10 Score=89.24 Aligned_cols=89 Identities=12% Similarity=0.171 Sum_probs=69.3
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC--CCC--CceEeeehhhh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ--FVP--PADAFLFKLVF 201 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~--~~p--~~D~v~~~~vl 201 (228)
+..+|||+|||+|.++..++++.. .+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 467999999999999999888753 48999999 888887764 2589999999876 332 49999988775
Q ss_pred cCCChhHHHHHHHHHHHH--hccCCC
Q 038208 202 HGLGDEDGLKILKKRREA--IASNGE 225 (228)
Q Consensus 202 h~~~d~~~~~il~~~~~a--L~pgG~ 225 (228)
| +. ....+++.+.+. |+|||.
T Consensus 133 ~-~~--~~~~~l~~l~~~~~L~pgG~ 155 (202)
T 2fpo_A 133 R-RG--LLEETINLLEDNGWLADEAL 155 (202)
T ss_dssp S-TT--THHHHHHHHHHTTCEEEEEE
T ss_pred C-CC--cHHHHHHHHHhcCccCCCcE
Confidence 5 32 235677777764 999974
No 208
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.01 E-value=4.6e-10 Score=90.17 Aligned_cols=90 Identities=9% Similarity=-0.047 Sum_probs=74.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC---CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVP---PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p---~~D~v~~~~ 199 (228)
..+..+|+|||||+|.++..+++..|..+++++|+ |..++.|++ .++|++..+|.++.++ .+|+|++..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 35668999999999999999999999999999999 888887764 5689999999998543 499998765
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
+.- +....||....+.|+++|
T Consensus 99 mGg----~lI~~IL~~~~~~l~~~~ 119 (230)
T 3lec_A 99 MGG----RLIADILNNDIDKLQHVK 119 (230)
T ss_dssp ECH----HHHHHHHHHTGGGGTTCC
T ss_pred Cch----HHHHHHHHHHHHHhCcCC
Confidence 442 455778888888888774
No 209
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.01 E-value=1.1e-09 Score=87.30 Aligned_cols=87 Identities=22% Similarity=0.235 Sum_probs=72.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHC-----CCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCCC----
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAF-----PGIKCTVLDL-PHVVANLPE-----------TDNLKYIAGDMFQFV---- 189 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~-----p~~~~~~~Dl-p~~i~~a~~-----------~~rv~~~~gD~~~~~---- 189 (228)
..+..+|||||||+|.++..+++.. |+.+++++|+ +.+++.+++ .++++++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4556899999999999999999986 6789999999 888877653 258999999998743
Q ss_pred C---CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 190 P---PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 190 p---~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+ .||+|++...+|++ ++++.+.|+|||.
T Consensus 158 ~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~ 188 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL--------PEILVDLLAENGK 188 (227)
T ss_dssp HHHCCEEEEEECSBBSSC--------CHHHHHHEEEEEE
T ss_pred ccCCCcCEEEECCchHHH--------HHHHHHhcCCCcE
Confidence 2 49999999998864 4778899999974
No 210
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.00 E-value=4.9e-10 Score=93.98 Aligned_cols=92 Identities=18% Similarity=0.248 Sum_probs=67.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-----hHHHhcCCC----CCCeEEEeC-CCCC-CCCCceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-----PHVVANLPE----TDNLKYIAG-DMFQ-FVPPADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-----p~~i~~a~~----~~rv~~~~g-D~~~-~~p~~D~v~~~~ 199 (228)
+.+..+|||||||+|.++..++++ .+++++|+ +..++.+.. .++|+++.+ |+.+ +...||+|++..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~ 156 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDI 156 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECC
Confidence 345679999999999999999987 47999998 544433221 267999999 9987 333599999876
Q ss_pred hhc--CC-ChhH-HHHHHHHHHHHhccCCC
Q 038208 200 VFH--GL-GDED-GLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh--~~-~d~~-~~~il~~~~~aL~pgG~ 225 (228)
.++ ++ .+.. ...+|+.+++.|+|||.
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~ 186 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSNNTQ 186 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCTTCE
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCCCCE
Confidence 653 12 2222 23689999999999973
No 211
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.00 E-value=3.7e-10 Score=94.47 Aligned_cols=101 Identities=15% Similarity=0.307 Sum_probs=72.9
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CCCC
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FVPP 191 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~p~ 191 (228)
..+++ .+. .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++ .++++++.+|+.+ +.+.
T Consensus 32 ~~i~~-~~~--~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~ 106 (299)
T 2h1r_A 32 DKIIY-AAK--IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPK 106 (299)
T ss_dssp HHHHH-HHC--CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCC
T ss_pred HHHHH-hcC--CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCccc
Confidence 44445 444 456789999999999999999987 468999999 888876653 3689999999987 5667
Q ss_pred ceEeeehhhhcCCChhHHHHHH---------------HHHHHHhccCCCC
Q 038208 192 ADAFLFKLVFHGLGDEDGLKIL---------------KKRREAIASNGER 226 (228)
Q Consensus 192 ~D~v~~~~vlh~~~d~~~~~il---------------~~~~~aL~pgG~~ 226 (228)
+|+|+++-. ++|..+....+| ..+.+.++|+|..
T Consensus 107 ~D~Vv~n~p-y~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~~ 155 (299)
T 2h1r_A 107 FDVCTANIP-YKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDS 155 (299)
T ss_dssp CSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTST
T ss_pred CCEEEEcCC-cccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCCc
Confidence 999988544 457777666776 3466788888753
No 212
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.00 E-value=5.1e-10 Score=92.12 Aligned_cols=88 Identities=14% Similarity=0.245 Sum_probs=71.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC---------CCCeEEEeCCCCC-CCC--CceEee
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEA-FPGIKCTVLDL-PHVVANLPE---------TDNLKYIAGDMFQ-FVP--PADAFL 196 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-p~~i~~a~~---------~~rv~~~~gD~~~-~~p--~~D~v~ 196 (228)
.....+|||||||+|.++..+++. .|..+++++|+ +.+++.+++ .++++++.+|+.+ +++ .+|+|+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~ 176 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAV 176 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEE
Confidence 556789999999999999999996 58899999999 888876653 2589999999987 444 499999
Q ss_pred ehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 197 FKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+ +.++. ..+|+++.+.|+|||.
T Consensus 177 ~-----~~~~~--~~~l~~~~~~L~pgG~ 198 (280)
T 1i9g_A 177 L-----DMLAP--WEVLDAVSRLLVAGGV 198 (280)
T ss_dssp E-----ESSCG--GGGHHHHHHHEEEEEE
T ss_pred E-----CCcCH--HHHHHHHHHhCCCCCE
Confidence 7 23333 3689999999999964
No 213
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.00 E-value=6e-10 Score=87.19 Aligned_cols=88 Identities=17% Similarity=0.265 Sum_probs=67.6
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEEEeCCCCCCCCCceEeeehhhhcCCChhHH
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-TDNLKYIAGDMFQFVPPADAFLFKLVFHGLGDEDG 209 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~~~p~~D~v~~~~vlh~~~d~~~ 209 (228)
....+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ ..+++++.+|+.+....||+|++...+|++++...
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~~~~ 128 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYDTWIMNPPFGSVVKHSD 128 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEEEEEECCCC-------C
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCCCCeeEEEECCCchhccCchh
Confidence 35679999999999999999987 5557999999 888887765 33899999999772135999999999998876555
Q ss_pred HHHHHHHHHHh
Q 038208 210 LKILKKRREAI 220 (228)
Q Consensus 210 ~~il~~~~~aL 220 (228)
..+++++.+.+
T Consensus 129 ~~~l~~~~~~~ 139 (200)
T 1ne2_A 129 RAFIDKAFETS 139 (200)
T ss_dssp HHHHHHHHHHE
T ss_pred HHHHHHHHHhc
Confidence 67888888877
No 214
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.99 E-value=3.2e-10 Score=90.68 Aligned_cols=87 Identities=17% Similarity=0.232 Sum_probs=71.8
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCC------CCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCCCC--
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFP------GIKCTVLDL-PHVVANLPE-----------TDNLKYIAGDMFQFVP-- 190 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p------~~~~~~~Dl-p~~i~~a~~-----------~~rv~~~~gD~~~~~p-- 190 (228)
..+..+|||||||+|.++..+++..+ ..+++++|+ +.+++.+++ .++++++.+|..++++
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 34567999999999999999999765 368999999 888877664 2589999999987544
Q ss_pred -CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 191 -PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 -~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++...+|+++ +++.+.|+|||.
T Consensus 162 ~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~ 189 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP--------TELINQLASGGR 189 (227)
T ss_dssp CSEEEEEECSCBSSCC--------HHHHHTEEEEEE
T ss_pred CCccEEEECCchHHHH--------HHHHHHhcCCCE
Confidence 499999999998765 678899999964
No 215
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.99 E-value=1.8e-10 Score=96.15 Aligned_cols=94 Identities=12% Similarity=0.148 Sum_probs=70.8
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCC---CC-CceEee
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----------TDNLKYIAGDMFQF---VP-PADAFL 196 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----------~~rv~~~~gD~~~~---~p-~~D~v~ 196 (228)
....+|||||||+|..+..+++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .+ .||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 4568999999999999999999888899999999 888876553 36899999998652 22 499999
Q ss_pred ehhhhcCCChh---HHHHHHHHHHHHhccCCC
Q 038208 197 FKLVFHGLGDE---DGLKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~~~d~---~~~~il~~~~~aL~pgG~ 225 (228)
+...-+..... ....+++++++.|+|||+
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~ 200 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGV 200 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcE
Confidence 74332201111 126889999999999974
No 216
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.99 E-value=1.8e-09 Score=86.98 Aligned_cols=86 Identities=14% Similarity=0.242 Sum_probs=70.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCC-C--CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFV-P--PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~-p--~~D~v~~~~ 199 (228)
.....+|||+|||+|.++..++++ ..+++++|+ +.+++.+++ .++++++.+|+.+.. + .||+|++
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~-- 164 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFV-- 164 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEE--
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEE--
Confidence 456789999999999999999998 779999998 888877654 278999999998855 4 4999987
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+.++. ..+++++.+.|+|||.
T Consensus 165 ---~~~~~--~~~l~~~~~~L~~gG~ 185 (248)
T 2yvl_A 165 ---DVREP--WHYLEKVHKSLMEGAP 185 (248)
T ss_dssp ---CSSCG--GGGHHHHHHHBCTTCE
T ss_pred ---CCcCH--HHHHHHHHHHcCCCCE
Confidence 23333 4679999999999974
No 217
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.99 E-value=5.5e-10 Score=91.67 Aligned_cols=85 Identities=7% Similarity=0.049 Sum_probs=70.9
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----------CCCeEEEeCCCCCCCCCceEeeehhh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----------TDNLKYIAGDMFQFVPPADAFLFKLV 200 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----------~~rv~~~~gD~~~~~p~~D~v~~~~v 200 (228)
+++.+|||||||+|..+.++++. + .+++++|+ |.+++.+++ .+|++++.+|..+....||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d-- 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCL-- 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEES--
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEEC--
Confidence 45689999999999999999998 7 89999999 899988875 258999999997733459999975
Q ss_pred hcCCChhHHHHHHHHHHHHhccCCC
Q 038208 201 FHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+++. .+++++++.|+|||+
T Consensus 147 ---~~dp~--~~~~~~~~~L~pgG~ 166 (262)
T 2cmg_A 147 ---QEPDI--HRIDGLKRMLKEDGV 166 (262)
T ss_dssp ---SCCCH--HHHHHHHTTEEEEEE
T ss_pred ---CCChH--HHHHHHHHhcCCCcE
Confidence 33442 489999999999974
No 218
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.98 E-value=6.6e-10 Score=89.97 Aligned_cols=90 Identities=9% Similarity=0.068 Sum_probs=73.6
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC--C-ceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVP--P-ADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p--~-~D~v~~~~ 199 (228)
..+..+|+|||||+|.++..+++..|..+++++|+ |..++.|++ .++|++..+|.++.++ . ||+|++..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 45668999999999999999999999999999999 888887764 4689999999998544 3 99998754
Q ss_pred hhcCCChhHHHHHHHHHHHHhccCC
Q 038208 200 VFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 200 vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
+. -+....||....+.|+++|
T Consensus 99 mG----g~lI~~IL~~~~~~L~~~~ 119 (244)
T 3gnl_A 99 MG----GTLIRTILEEGAAKLAGVT 119 (244)
T ss_dssp EC----HHHHHHHHHHTGGGGTTCC
T ss_pred Cc----hHHHHHHHHHHHHHhCCCC
Confidence 43 2556778888888887763
No 219
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.97 E-value=2.4e-10 Score=103.58 Aligned_cols=93 Identities=16% Similarity=0.189 Sum_probs=75.6
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC---CC-C-CceEeeeh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ---FV-P-PADAFLFK 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~---~~-p-~~D~v~~~ 198 (228)
+.++.+|||||||.|.++..+++. +.+++++|+ +..|+.|+. ..+|++.++|..+ +. + .||+|++.
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 456779999999999999999998 678999999 888887663 2469999999865 23 3 49999999
Q ss_pred hhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+|||.+|++...-+.++.+.|+++|.
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~~~~ 168 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLADVTQ 168 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHHHSS
T ss_pred cchhcCCCHHHHHHHHHHHHHhccccc
Confidence 999999988766666777778877753
No 220
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.97 E-value=3.7e-10 Score=93.12 Aligned_cols=89 Identities=21% Similarity=0.181 Sum_probs=73.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCC-CC-CceEeeehhhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQF-VP-PADAFLFKLVF 201 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~-~p-~~D~v~~~~vl 201 (228)
+.+..+|||+|||+|.++..++++.+..+++++|+ |.+++.+++ .++++++.+|+.+. .+ .+|+|++....
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 45678999999999999999999998889999999 888887764 35799999999874 22 49999886543
Q ss_pred cCCChhHHHHHHHHHHHHhccCCC
Q 038208 202 HGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
....+++++.+.|+|||.
T Consensus 197 ------~~~~~l~~~~~~LkpgG~ 214 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKDRGV 214 (272)
T ss_dssp ------SGGGGHHHHHHHEEEEEE
T ss_pred ------cHHHHHHHHHHHcCCCCE
Confidence 345689999999999974
No 221
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.96 E-value=1.1e-09 Score=87.23 Aligned_cols=87 Identities=16% Similarity=0.185 Sum_probs=70.8
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCCC---CCceE
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANLPE-----------TDNLKYIAGDMFQFV---PPADA 194 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~-----------~~rv~~~~gD~~~~~---p~~D~ 194 (228)
..+..+|||||||+|..+..+++.. |..+++++|+ +.+++.+++ .++++++.+|+.... ..||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 3456799999999999999999985 6789999999 888877653 258999999997632 24999
Q ss_pred eeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 195 FLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 195 v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
|++...++++. +++++.|+|||.
T Consensus 155 i~~~~~~~~~~--------~~~~~~LkpgG~ 177 (226)
T 1i1n_A 155 IHVGAAAPVVP--------QALIDQLKPGGR 177 (226)
T ss_dssp EEECSBBSSCC--------HHHHHTEEEEEE
T ss_pred EEECCchHHHH--------HHHHHhcCCCcE
Confidence 99998887654 578899999974
No 222
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.94 E-value=3.6e-10 Score=90.90 Aligned_cols=89 Identities=12% Similarity=0.175 Sum_probs=72.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC---CC------CCce
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ---FV------PPAD 193 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~---~~------p~~D 193 (228)
.+..+|||||||+|..+..+++..| +.+++++|+ |..++.+++ .++++++.+|+.+ .+ ..||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 4578999999999999999999987 789999999 888877664 3579999999754 12 3599
Q ss_pred EeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 194 AFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 194 ~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+|++... .+....+++++.+.|+|||.
T Consensus 151 ~V~~d~~-----~~~~~~~l~~~~~~LkpgG~ 177 (232)
T 3cbg_A 151 LIFIDAD-----KRNYPRYYEIGLNLLRRGGL 177 (232)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTEEEEEE
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcCCCeE
Confidence 9987543 34457899999999999974
No 223
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.94 E-value=1.1e-09 Score=92.74 Aligned_cols=95 Identities=15% Similarity=0.200 Sum_probs=72.6
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHH-CCCCeEEEeec-hHHHhcCCC-----------------CCCeEEE
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEA-FPGIKCTVLDL-PHVVANLPE-----------------TDNLKYI 181 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-p~~i~~a~~-----------------~~rv~~~ 181 (228)
.++. .++ .....+|||||||+|.++..+++. .|+.+++++|+ |.+++.+++ .++++++
T Consensus 96 ~~l~-~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~ 172 (336)
T 2b25_A 96 MILS-MMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI 172 (336)
T ss_dssp HHHH-HHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred HHHH-hcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence 3444 444 566789999999999999999998 58899999999 888776653 2689999
Q ss_pred eCCCCCC---CC--CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 182 AGDMFQF---VP--PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 182 ~gD~~~~---~p--~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+|+.+. ++ .||+|++.. ++. ..+++++++.|+|||.
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~~-----~~~--~~~l~~~~~~LkpgG~ 214 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALDM-----LNP--HVTLPVFYPHLKHGGV 214 (336)
T ss_dssp ESCTTCCC-------EEEEEECS-----SST--TTTHHHHGGGEEEEEE
T ss_pred ECChHHcccccCCCCeeEEEECC-----CCH--HHHHHHHHHhcCCCcE
Confidence 9999873 34 399999743 222 2378999999999974
No 224
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.92 E-value=2.8e-09 Score=88.16 Aligned_cols=90 Identities=13% Similarity=0.101 Sum_probs=69.2
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec--hHHHhcCCC------------C----CCeEEEeCCCCC---CC-
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL--PHVVANLPE------------T----DNLKYIAGDMFQ---FV- 189 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl--p~~i~~a~~------------~----~rv~~~~gD~~~---~~- 189 (228)
....+|||||||+|.++..+++.. ..+++++|+ +.+++.+++ . ++++++..|..+ ++
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 456799999999999999888863 458999999 577665432 1 478888666543 12
Q ss_pred -----CCceEeeehhhhcCCChhHHHHHHHHHHHHhc---c--CC
Q 038208 190 -----PPADAFLFKLVFHGLGDEDGLKILKKRREAIA---S--NG 224 (228)
Q Consensus 190 -----p~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~---p--gG 224 (228)
..||+|++..++|+.++ ...+++.+.+.|+ | ||
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~~--~~~ll~~l~~~Lk~~~p~~gG 199 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQA--HDALLRSVKMLLALPANDPTA 199 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGGG--HHHHHHHHHHHBCCTTTCTTC
T ss_pred hhccCCCCCEEEEeCcccChHH--HHHHHHHHHHHhcccCCCCCC
Confidence 24999999999987544 4789999999999 9 87
No 225
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.91 E-value=1.4e-09 Score=89.78 Aligned_cols=95 Identities=12% Similarity=0.120 Sum_probs=71.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CC-----C-CceEe
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPG-IKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FV-----P-PADAF 195 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~-----p-~~D~v 195 (228)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..+++++.+|+.+ +. + .||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 456789999999999999999999877 89999999 777776553 3589999999976 22 3 49999
Q ss_pred eeh------hhhcC---CCh-------hHHHHHHHHHHHHhccCCC
Q 038208 196 LFK------LVFHG---LGD-------EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~------~vlh~---~~d-------~~~~~il~~~~~aL~pgG~ 225 (228)
++. .+++. |+. +...++|+++.+.|||||.
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 206 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGE 206 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEE
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 876 22221 222 2237899999999999974
No 226
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.89 E-value=2.2e-09 Score=89.17 Aligned_cols=87 Identities=14% Similarity=0.183 Sum_probs=66.1
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhc-CCCCCCeEEEe-CCCCC----CCC--CceEeeehhhhcC
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVAN-LPETDNLKYIA-GDMFQ----FVP--PADAFLFKLVFHG 203 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~-a~~~~rv~~~~-gD~~~----~~p--~~D~v~~~~vlh~ 203 (228)
...+|||||||+|.++..++++ +..+++++|+ +.+++. ++..+|+.... .|+.. .+| .||++++..++|+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s 163 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS 163 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC
T ss_pred cccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhh
Confidence 4579999999999999999887 5568999999 777766 33356665543 34422 234 3899998888775
Q ss_pred CChhHHHHHHHHHHHHhccCCC
Q 038208 204 LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+ ..+|+++++.|+|||.
T Consensus 164 l-----~~vL~e~~rvLkpGG~ 180 (291)
T 3hp7_A 164 L-----NLILPALAKILVDGGQ 180 (291)
T ss_dssp G-----GGTHHHHHHHSCTTCE
T ss_pred H-----HHHHHHHHHHcCcCCE
Confidence 4 5689999999999973
No 227
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.87 E-value=7.5e-10 Score=89.29 Aligned_cols=85 Identities=20% Similarity=0.213 Sum_probs=55.8
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-CCCeEE--------Ee-CCCCCCCCCceEeeehhhh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-TDNLKY--------IA-GDMFQFVPPADAFLFKLVF 201 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-~~rv~~--------~~-gD~~~~~p~~D~v~~~~vl 201 (228)
...+|||||||+|.++..++++ ...+++++|+ +.+++.+++ ..++.. +. .|+..+. +|.+.+-.++
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~D~v~ 113 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGR--PSFTSIDVSF 113 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCC--CSEEEECCSS
T ss_pred CCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCC--CCEEEEEEEh
Confidence 4569999999999999999988 3348999999 777766432 333332 22 2222211 2333332233
Q ss_pred cCCChhHHHHHHHHHHHHhccCCC
Q 038208 202 HGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
..+ ..+|+++++.|||||.
T Consensus 114 ~~l-----~~~l~~i~rvLkpgG~ 132 (232)
T 3opn_A 114 ISL-----DLILPPLYEILEKNGE 132 (232)
T ss_dssp SCG-----GGTHHHHHHHSCTTCE
T ss_pred hhH-----HHHHHHHHHhccCCCE
Confidence 222 5789999999999974
No 228
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.86 E-value=5.2e-09 Score=84.89 Aligned_cols=92 Identities=14% Similarity=0.264 Sum_probs=64.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCCC-ceEeeehhhhcC
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQ-FVPP-ADAFLFKLVFHG 203 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~-~~p~-~D~v~~~~vlh~ 203 (228)
..+..+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++. .++.++.+..++
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~vv~nlPy~ 105 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYN 105 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCEEEEECCGG
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeEEEEeCCcc
Confidence 4567899999999999999999986 78999999 788876653 3689999999988 5652 333444444444
Q ss_pred CChhHHHHHH--------------HHHHHHhccCC
Q 038208 204 LGDEDGLKIL--------------KKRREAIASNG 224 (228)
Q Consensus 204 ~~d~~~~~il--------------~~~~~aL~pgG 224 (228)
++.+-...++ ..+.+.++|+|
T Consensus 106 ~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G 140 (244)
T 1qam_A 106 ISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKR 140 (244)
T ss_dssp GHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTS
T ss_pred cCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCc
Confidence 4333333333 23666677764
No 229
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.85 E-value=4.5e-09 Score=82.49 Aligned_cols=88 Identities=19% Similarity=0.177 Sum_probs=70.8
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCCCCceEeeehhhhcCCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQFVPPADAFLFKLVFHGLG 205 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~~~p~~D~v~~~~vlh~~~ 205 (228)
....+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++ .-+++++.+|+.+....||+|++.-.+|.+.
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGSQR 126 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSSSS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCcccc
Confidence 356799999999999999999874 347999999 888877654 1289999999977213699999999988887
Q ss_pred hhHHHHHHHHHHHHh
Q 038208 206 DEDGLKILKKRREAI 220 (228)
Q Consensus 206 d~~~~~il~~~~~aL 220 (228)
......+++++.+.+
T Consensus 127 ~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 127 KHADRPFLLKAFEIS 141 (207)
T ss_dssp TTTTHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHhc
Confidence 555577888888876
No 230
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.85 E-value=3.9e-09 Score=85.57 Aligned_cols=101 Identities=14% Similarity=0.229 Sum_probs=71.1
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCCC-c
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQ-FVPP-A 192 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~-~~p~-~ 192 (228)
..+++ .++ .....+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++. .
T Consensus 19 ~~i~~-~~~--~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~ 93 (245)
T 1yub_A 19 NQIIK-QLN--LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQ 93 (245)
T ss_dssp HHHHH-HCC--CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSS
T ss_pred HHHHH-hcC--CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCC
Confidence 34455 444 4567799999999999999999985 78999999 888887775 3689999999987 5552 1
Q ss_pred eEeeehhhhcCCChhHHHHHH--------------HHHHHHhccCCC
Q 038208 193 DAFLFKLVFHGLGDEDGLKIL--------------KKRREAIASNGE 225 (228)
Q Consensus 193 D~v~~~~vlh~~~d~~~~~il--------------~~~~~aL~pgG~ 225 (228)
.++++.+.-++.+++....++ +.+.+.|+|||.
T Consensus 94 ~f~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~ 140 (245)
T 1yub_A 94 RYKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRT 140 (245)
T ss_dssp EEEEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGS
T ss_pred CcEEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCc
Confidence 123334443444444333333 568899999963
No 231
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.85 E-value=8.2e-09 Score=89.73 Aligned_cols=90 Identities=17% Similarity=0.183 Sum_probs=70.3
Q ss_pred CCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCC--CceEeeehhhhcC-----
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQFVP--PADAFLFKLVFHG----- 203 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~~p--~~D~v~~~~vlh~----- 203 (228)
...+|||+|||+|.++..+++++ +..+++++|+ |.+++.+ .+++++++|+++..+ .||+|+++-....
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~~~~ 115 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDLILGNPPYGIVGEAS 115 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEEEEECCCCCCBSCTT
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCEEEECcCccCccccc
Confidence 45699999999999999999987 6789999999 7777766 689999999988433 5999999522211
Q ss_pred -----CChhHH-----------------HHHHHHHHHHhccCCC
Q 038208 204 -----LGDEDG-----------------LKILKKRREAIASNGE 225 (228)
Q Consensus 204 -----~~d~~~-----------------~~il~~~~~aL~pgG~ 225 (228)
.+++.. ..+++++.+.|+|||.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~ 159 (421)
T 2ih2_A 116 KYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGV 159 (421)
T ss_dssp TCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEE
T ss_pred ccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCE
Confidence 223221 2679999999999974
No 232
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.83 E-value=2e-09 Score=91.52 Aligned_cols=93 Identities=11% Similarity=0.154 Sum_probs=76.0
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCC-----CeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCCCC--CceEeeehh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPG-----IKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQFVP--PADAFLFKL 199 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~-----~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~~~p--~~D~v~~~~ 199 (228)
...+|||+|||+|.++..+++..+. .+++++|+ |.+++.++. ..+++++.+|.+++.+ .||+|+++-
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDL 209 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEEC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECC
Confidence 4579999999999999999998765 78999999 888877654 3478999999988544 599999998
Q ss_pred hhcCCChhHH----------------HHHHHHHHHHhccCCC
Q 038208 200 VFHGLGDEDG----------------LKILKKRREAIASNGE 225 (228)
Q Consensus 200 vlh~~~d~~~----------------~~il~~~~~aL~pgG~ 225 (228)
.++.++.++. ..+++++.+.|+|||.
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~ 251 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGY 251 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEE
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCE
Confidence 8776655432 2689999999999974
No 233
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.83 E-value=9.3e-09 Score=90.64 Aligned_cols=95 Identities=15% Similarity=0.128 Sum_probs=74.3
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CC--CceEeee
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPG-IKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-F--VP--PADAFLF 197 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~--~p--~~D~v~~ 197 (228)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..+++++.+|+.+ + ++ .||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 455679999999999999999999887 89999999 777766543 3579999999977 3 44 3999996
Q ss_pred ------hhhhcCCChh-------HH-------HHHHHHHHHHhccCCC
Q 038208 198 ------KLVFHGLGDE-------DG-------LKILKKRREAIASNGE 225 (228)
Q Consensus 198 ------~~vlh~~~d~-------~~-------~~il~~~~~aL~pgG~ 225 (228)
..+++..++. +. ..+|+++.+.|||||.
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~ 384 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGR 384 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 3455544432 11 6789999999999974
No 234
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.80 E-value=1.2e-09 Score=83.75 Aligned_cols=77 Identities=14% Similarity=0.070 Sum_probs=63.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC-CC---C--CceEeeehhhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE--TDNLKYIAGDMFQ-FV---P--PADAFLFKLVF 201 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~--~~rv~~~~gD~~~-~~---p--~~D~v~~~~vl 201 (228)
.....+|||||||. +.+|+ +.+++.+++ ..+++++.+|+.+ ++ + .||+|++.+++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 56678999999996 23788 788887765 3469999999977 44 4 39999999999
Q ss_pred cCC-ChhHHHHHHHHHHHHhccCCC
Q 038208 202 HGL-GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 202 h~~-~d~~~~~il~~~~~aL~pgG~ 225 (228)
|++ ++. ..+|+++++.|||||.
T Consensus 74 ~~~~~~~--~~~l~~~~r~LkpgG~ 96 (176)
T 2ld4_A 74 GSTTLHS--AEILAEIARILRPGGC 96 (176)
T ss_dssp TCCCCCC--HHHHHHHHHHEEEEEE
T ss_pred hhcccCH--HHHHHHHHHHCCCCEE
Confidence 998 554 6899999999999973
No 235
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.76 E-value=4.9e-09 Score=92.49 Aligned_cols=94 Identities=12% Similarity=0.062 Sum_probs=72.6
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CC-CceEeee-
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPG-IKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-F--VP-PADAFLF- 197 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~--~p-~~D~v~~- 197 (228)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ .. |+++.+|..+ + .+ .||+|++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEEC
Confidence 456789999999999999999999875 78999999 888877654 34 9999999876 2 34 4999985
Q ss_pred ------------hhhhcCCChhHH-------HHHHHHHHHHhccCCC
Q 038208 198 ------------KLVFHGLGDEDG-------LKILKKRREAIASNGE 225 (228)
Q Consensus 198 ------------~~vlh~~~d~~~-------~~il~~~~~aL~pgG~ 225 (228)
..+...|++++. .++|+++.+.|||||.
T Consensus 178 ~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~ 224 (464)
T 3m6w_A 178 APCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGV 224 (464)
T ss_dssp CCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 122233444333 7899999999999974
No 236
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.75 E-value=5.9e-09 Score=88.39 Aligned_cols=91 Identities=18% Similarity=0.155 Sum_probs=69.5
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CC-CeEEEeCCCCCCC------C-CceEee
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TD-NLKYIAGDMFQFV------P-PADAFL 196 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~-rv~~~~gD~~~~~------p-~~D~v~ 196 (228)
+..+|||+|||+|.++..+++... +++++|+ +.+++.+++ .+ +++++.+|+++.. . .||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 457999999999999999999744 8999999 888887764 22 5999999997721 2 499998
Q ss_pred ehhhhcC-------C-ChhHHHHHHHHHHHHhccCCC
Q 038208 197 FKLVFHG-------L-GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 197 ~~~vlh~-------~-~d~~~~~il~~~~~aL~pgG~ 225 (228)
+.-.... + ..+....+++++.+.|+|||.
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~ 267 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKAL 267 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcE
Confidence 8432100 0 123457899999999999985
No 237
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.73 E-value=2.6e-08 Score=88.36 Aligned_cols=93 Identities=20% Similarity=0.154 Sum_probs=72.5
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CC-CceEeeeh--
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-F--VP-PADAFLFK-- 198 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~--~p-~~D~v~~~-- 198 (228)
...+|||+|||+|..+..+++..+ ..+++++|+ +..++.+++ ..+|+++.+|..+ + .+ .||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 678999999999999999999875 579999999 787776653 3579999999977 2 34 49999871
Q ss_pred ----hhh-------cCCChhH-------HHHHHHHHHHHhccCCC
Q 038208 199 ----LVF-------HGLGDED-------GLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ----~vl-------h~~~d~~-------~~~il~~~~~aL~pgG~ 225 (228)
.++ +.|++++ ..++|+++.+.|||||.
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~ 241 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGT 241 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 122 3354432 35789999999999974
No 238
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.69 E-value=2e-08 Score=87.91 Aligned_cols=95 Identities=17% Similarity=0.146 Sum_probs=73.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCC---CC--CceEeee--
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQF---VP--PADAFLF-- 197 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~~---~p--~~D~v~~-- 197 (228)
..+..+|||+|||+|..+..+++..|+.+++++|+ +..++.+++ ..+++++.+|+.+. ++ .||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 34567999999999999999999999899999999 776665543 33689999999772 33 4999986
Q ss_pred ----hhhhcCCCh-------hHH-------HHHHHHHHHHhccCCC
Q 038208 198 ----KLVFHGLGD-------EDG-------LKILKKRREAIASNGE 225 (228)
Q Consensus 198 ----~~vlh~~~d-------~~~-------~~il~~~~~aL~pgG~ 225 (228)
..+++..++ ++. ..+|+++.+.|||||.
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~ 369 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGT 369 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 234444333 222 5889999999999974
No 239
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.69 E-value=3.5e-08 Score=82.19 Aligned_cols=88 Identities=14% Similarity=0.271 Sum_probs=65.6
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCCC--
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQ-FVPP-- 191 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~-~~p~-- 191 (228)
..+++ ... .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 40 ~~Iv~-~l~--~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 40 NKAVE-SAN--LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHHH-HTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSC
T ss_pred HHHHH-hcC--CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCC
Confidence 34455 444 456789999999999999999998 578999999 888877764 4799999999988 6664
Q ss_pred ceEeeehhhhcCCChhHHHHHH
Q 038208 192 ADAFLFKLVFHGLGDEDGLKIL 213 (228)
Q Consensus 192 ~D~v~~~~vlh~~~d~~~~~il 213 (228)
||+|+.+... +++.+-..++|
T Consensus 115 fD~Iv~NlPy-~is~pil~~lL 135 (295)
T 3gru_A 115 FNKVVANLPY-QISSPITFKLI 135 (295)
T ss_dssp CSEEEEECCG-GGHHHHHHHHH
T ss_pred ccEEEEeCcc-cccHHHHHHHH
Confidence 8998866444 34444333333
No 240
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.65 E-value=1.6e-08 Score=86.93 Aligned_cols=90 Identities=16% Similarity=0.072 Sum_probs=69.8
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-CCC--CceEeeehh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-FVP--PADAFLFKL 199 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~~p--~~D~v~~~~ 199 (228)
+.+..+|||+|||+|.++.++++..+..+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .+|+|+++-
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 45678999999999999999999988778999999 888887764 2589999999988 544 499999975
Q ss_pred hhcCCC------hhHHHHHHHHHHHHh
Q 038208 200 VFHGLG------DEDGLKILKKRREAI 220 (228)
Q Consensus 200 vlh~~~------d~~~~~il~~~~~aL 220 (228)
..+... .+.-..+++.+.+.|
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc
Confidence 544321 111256778888877
No 241
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.64 E-value=1.7e-08 Score=83.44 Aligned_cols=88 Identities=20% Similarity=0.125 Sum_probs=69.6
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCC--CceEeeehhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVP--PADAFLFKLV 200 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p--~~D~v~~~~v 200 (228)
..+..+|||+|||+|.++..++++ ...+++++|+ |..++.+++ .++|+++.+|..+-.+ .||.|++...
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 456789999999999999999987 3568999999 888876653 6789999999987323 4999887532
Q ss_pred hcCCChhHHHHHHHHHHHHhccCCC
Q 038208 201 FHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
..+...|..+.+.|+|||.
T Consensus 202 ------~~~~~~l~~a~~~lk~gG~ 220 (278)
T 3k6r_A 202 ------VRTHEFIPKALSIAKDGAI 220 (278)
T ss_dssp ------SSGGGGHHHHHHHEEEEEE
T ss_pred ------CcHHHHHHHHHHHcCCCCE
Confidence 1224678888999999974
No 242
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.64 E-value=4.7e-08 Score=81.17 Aligned_cols=87 Identities=15% Similarity=0.169 Sum_probs=63.0
Q ss_pred ccCCCeEEEecCCC------cHHHHHHHHHCC-CCeEEEeechHHHhcCCCCCCeEE-EeCCCCC-CCC-CceEeeehhh
Q 038208 131 FEGLGSLVDVGGGN------GSFSRIISEAFP-GIKCTVLDLPHVVANLPETDNLKY-IAGDMFQ-FVP-PADAFLFKLV 200 (228)
Q Consensus 131 ~~~~~~vlDvGgG~------G~~~~~l~~~~p-~~~~~~~Dlp~~i~~a~~~~rv~~-~~gD~~~-~~p-~~D~v~~~~v 200 (228)
+.+..+|||||||+ |. ..++++.| +.+++++|+.+.+ +++++ +.+|+.+ +++ .||+|++...
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v------~~v~~~i~gD~~~~~~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV------SDADSTLIGDCATVHTANKWDLIISDMY 132 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB------CSSSEEEESCGGGCCCSSCEEEEEECCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCC------CCCEEEEECccccCCccCcccEEEEcCC
Confidence 45677999999944 76 44566776 6899999993332 47899 9999987 444 4999998643
Q ss_pred hcC---C------ChhHHHHHHHHHHHHhccCCC
Q 038208 201 FHG---L------GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 lh~---~------~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+. + ..+....+|+.+++.|||||.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~ 166 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGS 166 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcE
Confidence 221 1 123456899999999999974
No 243
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.60 E-value=2.5e-08 Score=87.84 Aligned_cols=95 Identities=15% Similarity=0.164 Sum_probs=71.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--CC-CceEeeeh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPG-IKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-F--VP-PADAFLFK 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~--~p-~~D~v~~~ 198 (228)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..+|.++.+|..+ + .+ .||+|++.
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 456789999999999999999998764 78999999 777776653 4579999999866 2 34 49999873
Q ss_pred h------hhc-------CCChhH-------HHHHHHHHHHHhccCCC
Q 038208 199 L------VFH-------GLGDED-------GLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~------vlh-------~~~d~~-------~~~il~~~~~aL~pgG~ 225 (228)
- ++. .|+.++ ..++|+++.+.|||||.
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~ 229 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQ 229 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 2 221 232222 23889999999999974
No 244
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.58 E-value=6.9e-08 Score=83.60 Aligned_cols=92 Identities=7% Similarity=0.002 Sum_probs=71.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCC--------------------------------------CeEEEeec-hHHHhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPG--------------------------------------IKCTVLDL-PHVVAN 171 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~--------------------------------------~~~~~~Dl-p~~i~~ 171 (228)
+.+...|||.+||+|.++++.+....+ .+++++|+ +.+++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 556789999999999999988876543 57999999 888887
Q ss_pred CCC-------CCCeEEEeCCCCC-CCC-CceEeeehhhhcCC-C-hhHHHHHHHHHHHHhcc
Q 038208 172 LPE-------TDNLKYIAGDMFQ-FVP-PADAFLFKLVFHGL-G-DEDGLKILKKRREAIAS 222 (228)
Q Consensus 172 a~~-------~~rv~~~~gD~~~-~~p-~~D~v~~~~vlh~~-~-d~~~~~il~~~~~aL~p 222 (228)
++. .++|+++.+|+.+ +.+ .+|+|+++-..+.- . +++...+.+.+.+.|++
T Consensus 279 Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~ 340 (393)
T 3k0b_A 279 AKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKR 340 (393)
T ss_dssp HHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhc
Confidence 764 4579999999988 444 49999988544322 2 24566788888888887
No 245
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.57 E-value=1.1e-07 Score=77.37 Aligned_cols=90 Identities=20% Similarity=0.265 Sum_probs=64.4
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC-CCCC-c-e
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE--TDNLKYIAGDMFQ-FVPP-A-D 193 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~--~~rv~~~~gD~~~-~~p~-~-D 193 (228)
..+++ .++ .....+|||||||+|.++..++++ +..+++++|+ +.+++.+++ ..+++++.+|+.+ +++. + +
T Consensus 21 ~~iv~-~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~ 96 (249)
T 3ftd_A 21 KKIAE-ELN--IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKE 96 (249)
T ss_dssp HHHHH-HTT--CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSS
T ss_pred HHHHH-hcC--CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCC
Confidence 33445 444 456789999999999999999987 5678999999 888877665 4689999999988 5553 1 4
Q ss_pred EeeehhhhcCCChhHHHHHH
Q 038208 194 AFLFKLVFHGLGDEDGLKIL 213 (228)
Q Consensus 194 ~v~~~~vlh~~~d~~~~~il 213 (228)
++++.+.-++.+.+-..++|
T Consensus 97 ~~vv~NlPy~i~~~il~~ll 116 (249)
T 3ftd_A 97 LKVVGNLPYNVASLIIENTV 116 (249)
T ss_dssp EEEEEECCTTTHHHHHHHHH
T ss_pred cEEEEECchhccHHHHHHHH
Confidence 45666665555544333333
No 246
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.57 E-value=8.1e-08 Score=80.25 Aligned_cols=76 Identities=24% Similarity=0.274 Sum_probs=60.4
Q ss_pred HHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCC-C--C
Q 038208 119 TSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQ-F--V 189 (228)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~-~--~ 189 (228)
...+++ .+. .....+|||+|||+|.++..+++++|+.+++++|+ |.+++.+++ .++++++.+|+.+ + +
T Consensus 15 l~e~l~-~L~--~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 15 VREVIE-FLK--PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLL 91 (301)
T ss_dssp HHHHHH-HHC--CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHH
T ss_pred HHHHHH-hcC--CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHH
Confidence 344455 444 45678999999999999999999999899999999 888887664 3699999999865 2 1
Q ss_pred -----CCceEeee
Q 038208 190 -----PPADAFLF 197 (228)
Q Consensus 190 -----p~~D~v~~ 197 (228)
..+|.|++
T Consensus 92 ~~~g~~~~D~Vl~ 104 (301)
T 1m6y_A 92 KTLGIEKVDGILM 104 (301)
T ss_dssp HHTTCSCEEEEEE
T ss_pred HhcCCCCCCEEEE
Confidence 34888875
No 247
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.57 E-value=2.3e-07 Score=80.08 Aligned_cols=92 Identities=14% Similarity=0.087 Sum_probs=72.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCC--------------------------------------CeEEEeec-hHHHhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPG--------------------------------------IKCTVLDL-PHVVAN 171 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~--------------------------------------~~~~~~Dl-p~~i~~ 171 (228)
+.+...|+|.+||+|.++++.+....+ .+++++|+ +.+++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 566789999999999999988875544 56999999 888887
Q ss_pred CCC-------CCCeEEEeCCCCC-CCC-CceEeeehhhhcC-C-ChhHHHHHHHHHHHHhcc
Q 038208 172 LPE-------TDNLKYIAGDMFQ-FVP-PADAFLFKLVFHG-L-GDEDGLKILKKRREAIAS 222 (228)
Q Consensus 172 a~~-------~~rv~~~~gD~~~-~~p-~~D~v~~~~vlh~-~-~d~~~~~il~~~~~aL~p 222 (228)
++. .++++++.+|+.+ +.+ .+|+|+++-..+. . ..++...+.+.+.+.|++
T Consensus 272 Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 272 ARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp HHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh
Confidence 764 4579999999988 444 5999998755432 3 345677888889999987
No 248
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.56 E-value=4.4e-08 Score=83.09 Aligned_cols=85 Identities=20% Similarity=0.270 Sum_probs=68.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCCCCCCceEeeehhhhcC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQFVPPADAFLFKLVFHG 203 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~~~p~~D~v~~~~vlh~ 203 (228)
.+..+|||+|||+|.++.. ++ ...+++++|+ |.+++.+++ .++++++.+|+++....||+|++.-.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP--- 267 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLP--- 267 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCT---
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCc---
Confidence 4678999999999999999 77 4778999999 888877664 36899999999874456999998421
Q ss_pred CChhHHHHHHHHHHHHhccCCC
Q 038208 204 LGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.....+++.+.+.|+|||.
T Consensus 268 ---~~~~~~l~~~~~~L~~gG~ 286 (336)
T 2yx1_A 268 ---KFAHKFIDKALDIVEEGGV 286 (336)
T ss_dssp ---TTGGGGHHHHHHHEEEEEE
T ss_pred ---HhHHHHHHHHHHHcCCCCE
Confidence 1123789999999999973
No 249
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.56 E-value=2.5e-08 Score=86.40 Aligned_cols=92 Identities=16% Similarity=0.161 Sum_probs=70.8
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------C-CCeEEEeCCCCCCC------C-CceEeee
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------T-DNLKYIAGDMFQFV------P-PADAFLF 197 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~-~rv~~~~gD~~~~~------p-~~D~v~~ 197 (228)
+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ . ++++++.+|+++.. . .||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 6789999999999999999987 4558999999 888877664 2 38999999997621 2 4999998
Q ss_pred hhhhcCCCh-------hHHHHHHHHHHHHhccCCC
Q 038208 198 KLVFHGLGD-------EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 198 ~~vlh~~~d-------~~~~~il~~~~~aL~pgG~ 225 (228)
.-..+..+. .....+++++.+.|+|||.
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 330 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGI 330 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 432222221 4457889999999999973
No 250
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.56 E-value=5.7e-08 Score=80.57 Aligned_cols=95 Identities=16% Similarity=0.168 Sum_probs=73.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------CCCeEEEeCCCCCCCC----CceE
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----------TDNLKYIAGDMFQFVP----PADA 194 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----------~~rv~~~~gD~~~~~p----~~D~ 194 (228)
.+++++||-||+|.|..++++++..|..+++++|+ |.|++.+++ .+|++++.+|.++-+. .||+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 35789999999999999999999877789999999 888886653 6899999999987322 4999
Q ss_pred eeehhhhcCCChh--HHHHHHHHHHHHhccCCC
Q 038208 195 FLFKLVFHGLGDE--DGLKILKKRREAIASNGE 225 (228)
Q Consensus 195 v~~~~vlh~~~d~--~~~~il~~~~~aL~pgG~ 225 (228)
|++-..=..-+.+ -...+++.++++|+|||+
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv 193 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGI 193 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEE
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCE
Confidence 9864321111111 124689999999999985
No 251
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.56 E-value=1.4e-07 Score=77.67 Aligned_cols=87 Identities=16% Similarity=0.136 Sum_probs=63.6
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---CCCeEEEeCCCCC-CCC---Cc
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE---TDNLKYIAGDMFQ-FVP---PA 192 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~---~~rv~~~~gD~~~-~~p---~~ 192 (228)
.+++ ... .... +|||||||+|.++..++++. .+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .+
T Consensus 38 ~Iv~-~~~--~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~ 111 (271)
T 3fut_A 38 RIVE-AAR--PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQG 111 (271)
T ss_dssp HHHH-HHC--CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTT
T ss_pred HHHH-hcC--CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCc
Confidence 3445 444 4456 99999999999999999985 67999999 788876654 4689999999987 555 36
Q ss_pred eEeeehhhhcCCChhHHHHHHH
Q 038208 193 DAFLFKLVFHGLGDEDGLKILK 214 (228)
Q Consensus 193 D~v~~~~vlh~~~d~~~~~il~ 214 (228)
|.|+ .+.-++.+.+-..++|.
T Consensus 112 ~~iv-~NlPy~iss~il~~ll~ 132 (271)
T 3fut_A 112 SLLV-ANLPYHIATPLVTRLLK 132 (271)
T ss_dssp EEEE-EEECSSCCHHHHHHHHH
T ss_pred cEEE-ecCcccccHHHHHHHhc
Confidence 6654 44555666665555554
No 252
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.55 E-value=9.1e-08 Score=77.94 Aligned_cols=89 Identities=15% Similarity=0.120 Sum_probs=60.8
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCCC-c
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQ-FVPP-A 192 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~-~~p~-~ 192 (228)
..+++ .+. .....+|||||||+|.++. +. +.+..+++++|+ +.+++.+++ .++++++.+|+.+ +++. +
T Consensus 11 ~~iv~-~~~--~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~ 85 (252)
T 1qyr_A 11 DSIVS-AIN--PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELA 85 (252)
T ss_dssp HHHHH-HHC--CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHH
T ss_pred HHHHH-hcC--CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhh
Confidence 34455 444 4566799999999999999 54 555555999999 888887765 2589999999987 5442 2
Q ss_pred -----eEeeehhhhcCCChhHHHHHH
Q 038208 193 -----DAFLFKLVFHGLGDEDGLKIL 213 (228)
Q Consensus 193 -----D~v~~~~vlh~~~d~~~~~il 213 (228)
+.+++.+.-++.+.+...++|
T Consensus 86 ~~~~~~~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 86 EKMGQPLRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp HHHTSCEEEEEECCTTTHHHHHHHHH
T ss_pred cccCCceEEEECCCCCccHHHHHHHH
Confidence 345555555555554444444
No 253
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.55 E-value=3.3e-08 Score=85.30 Aligned_cols=91 Identities=12% Similarity=0.120 Sum_probs=70.4
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCC------C-CceEeeeh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFV------P-PADAFLFK 198 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~------p-~~D~v~~~ 198 (228)
+..+|||+|||+|.++..+++. ..+++++|+ +.+++.+++ .++++++.+|+++.. + .||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 5679999999999999999998 668999999 888887764 345999999997621 3 49999974
Q ss_pred hhhcCCCh-------hHHHHHHHHHHHHhccCCC
Q 038208 199 LVFHGLGD-------EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh~~~d-------~~~~~il~~~~~aL~pgG~ 225 (228)
-.....+. +....+++++.+.|+|||.
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 320 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGI 320 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 32211111 4456799999999999974
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.52 E-value=6.2e-08 Score=82.48 Aligned_cols=93 Identities=15% Similarity=0.226 Sum_probs=67.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----------C---CCeEEEeCCCCCCC------C
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----------T---DNLKYIAGDMFQFV------P 190 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----------~---~rv~~~~gD~~~~~------p 190 (228)
+++.+|||||||+|..++++++..+ .+++.+|+ |.+++.+++ . +|++++.+|.++-+ .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4678999999999999999998765 78999999 888887653 0 27999999997721 2
Q ss_pred -CceEeeehhhh-c-CCCh--hHHHHHHHHH----HHHhccCCC
Q 038208 191 -PADAFLFKLVF-H-GLGD--EDGLKILKKR----REAIASNGE 225 (228)
Q Consensus 191 -~~D~v~~~~vl-h-~~~d--~~~~~il~~~----~~aL~pgG~ 225 (228)
.||+|++--.- . ...+ -....+++.+ +++|+|||+
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGi 309 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGK 309 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcE
Confidence 49999875422 1 0011 1224455555 999999975
No 255
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.51 E-value=1.6e-07 Score=81.16 Aligned_cols=92 Identities=15% Similarity=0.098 Sum_probs=71.6
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCC--------------------------------------CeEEEeec-hHHHhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPG--------------------------------------IKCTVLDL-PHVVAN 171 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~--------------------------------------~~~~~~Dl-p~~i~~ 171 (228)
+.+..+|||++||+|.++++++....+ .+++++|+ +.+++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 456789999999999999998876432 57999999 899988
Q ss_pred CCC-------CCCeEEEeCCCCC-CCC-CceEeeehhhhcC-CC-hhHHHHHHHHHHHHhcc
Q 038208 172 LPE-------TDNLKYIAGDMFQ-FVP-PADAFLFKLVFHG-LG-DEDGLKILKKRREAIAS 222 (228)
Q Consensus 172 a~~-------~~rv~~~~gD~~~-~~p-~~D~v~~~~vlh~-~~-d~~~~~il~~~~~aL~p 222 (228)
|+. .++|+++.+|+.+ +.+ .+|+|+++-.... +. .++...+.+.+.+.|++
T Consensus 273 Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~ 334 (385)
T 3ldu_A 273 ARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRK 334 (385)
T ss_dssp HHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhh
Confidence 764 3479999999988 344 4999998665432 22 35667788888888887
No 256
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.50 E-value=4.7e-08 Score=84.65 Aligned_cols=93 Identities=9% Similarity=0.003 Sum_probs=71.1
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------C-C-CeEEEeCCCCCCC------C-CceEe
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------T-D-NLKYIAGDMFQFV------P-PADAF 195 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~-~-rv~~~~gD~~~~~------p-~~D~v 195 (228)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++ . + +++++.+|+++.. + .||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 456799999999999999999874 458999999 888877664 2 3 8999999997621 2 49999
Q ss_pred eehhhhcCCC-------hhHHHHHHHHHHHHhccCCC
Q 038208 196 LFKLVFHGLG-------DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~~vlh~~~-------d~~~~~il~~~~~aL~pgG~ 225 (228)
++.-.....+ .+....++.++.+.|+|||.
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 334 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGI 334 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEE
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 8853221111 14457899999999999974
No 257
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.48 E-value=2.2e-07 Score=81.43 Aligned_cols=86 Identities=12% Similarity=0.172 Sum_probs=62.4
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCC-----C--CceEee
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFV-----P--PADAFL 196 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~-----p--~~D~v~ 196 (228)
..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|++ ..+++|+.+|+.+.+ + .||+|+
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 345679999999999999999987 678999999 888887764 358999999998732 2 389998
Q ss_pred ehhhhcCCChhHHHHHHHHHHHHhccCC
Q 038208 197 FKLVFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 197 ~~~vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
+. .|-..+..+++.+.+ ++|++
T Consensus 362 ~d-----PPr~g~~~~~~~l~~-~~p~~ 383 (433)
T 1uwv_A 362 LD-----PARAGAAGVMQQIIK-LEPIR 383 (433)
T ss_dssp EC-----CCTTCCHHHHHHHHH-HCCSE
T ss_pred EC-----CCCccHHHHHHHHHh-cCCCe
Confidence 73 222212234444443 56654
No 258
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.48 E-value=4.8e-08 Score=80.76 Aligned_cols=68 Identities=18% Similarity=0.270 Sum_probs=54.1
Q ss_pred HHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCC--CeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC-CCCC
Q 038208 121 FVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPG--IKCTVLDL-PHVVANLPE--TDNLKYIAGDMFQ-FVPP 191 (228)
Q Consensus 121 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~--~~~~~~Dl-p~~i~~a~~--~~rv~~~~gD~~~-~~p~ 191 (228)
.+++ .+. .....+|||||||+|.++..++++.+. .+++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 33 ~iv~-~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 33 AIVA-AIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHH-HHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred HHHH-hcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 3444 444 456789999999999999999998754 66999999 888887765 4789999999987 5543
No 259
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.48 E-value=7e-08 Score=83.35 Aligned_cols=93 Identities=16% Similarity=0.157 Sum_probs=69.5
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------CC-CeEEEeCCCCCCC------C-CceEe
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------TD-NLKYIAGDMFQFV------P-PADAF 195 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~~-rv~~~~gD~~~~~------p-~~D~v 195 (228)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++ .+ +++++.+|+++.+ . .||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 456799999999999999999863 348999999 888887764 23 8999999997621 2 49999
Q ss_pred eehhhh-----cCCC--hhHHHHHHHHHHHHhccCCC
Q 038208 196 LFKLVF-----HGLG--DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 196 ~~~~vl-----h~~~--d~~~~~il~~~~~aL~pgG~ 225 (228)
++.-.. +... .+....+++.+.+.|+|||.
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~ 326 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGL 326 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEE
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 984322 1222 13345688999999999974
No 260
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.47 E-value=1.6e-07 Score=81.33 Aligned_cols=91 Identities=12% Similarity=0.063 Sum_probs=66.6
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-----CCCeEEEeCCCCCC---CC-CceEeeehhhhc
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-----TDNLKYIAGDMFQF---VP-PADAFLFKLVFH 202 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-----~~rv~~~~gD~~~~---~p-~~D~v~~~~vlh 202 (228)
+..+|||+|||+|.++..+++.. .+++++|+ +.+++.+++ .-..++..+|.++. .+ .||+|++.-...
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 37899999999999999999974 44999999 888887764 22235679998772 23 399998753321
Q ss_pred CCCh-------hHHHHHHHHHHHHhccCCC
Q 038208 203 GLGD-------EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d-------~~~~~il~~~~~aL~pgG~ 225 (228)
..+. ..-..+++.+.+.|+|||.
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~ 321 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGF 321 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 1111 2335789999999999974
No 261
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.46 E-value=1.1e-07 Score=77.50 Aligned_cols=66 Identities=18% Similarity=0.305 Sum_probs=52.8
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCC-CCC
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQ-FVP 190 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~-~~p 190 (228)
..+++ ... .....+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 19 ~~iv~-~~~--~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 19 QKIVS-AIH--PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHH-HHC--CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGG
T ss_pred HHHHH-hcC--CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHH
Confidence 33455 444 4567899999999999999999985 68999999 888887654 4799999999988 443
No 262
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.46 E-value=5.1e-08 Score=88.74 Aligned_cols=124 Identities=15% Similarity=0.206 Sum_probs=83.9
Q ss_pred hhhcccCccHHHHHHHHHHhccchhHHHHHHHhhhhh--ccCCCeEEEecCCCcHHHHHHHH---HC-CCCeEEEeechH
Q 038208 94 WEFLNQNPGINQRFNEAMASDSEIMTSFVVKAECKQI--FEGLGSLVDVGGGNGSFSRIISE---AF-PGIKCTVLDLPH 167 (228)
Q Consensus 94 ~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~--~~~~~~vlDvGgG~G~~~~~l~~---~~-p~~~~~~~Dlp~ 167 (228)
||.+++|+-+...|.+|+.. .+.+ ..+.. ..+...|+|||||+|-+....++ +. -++++.+++-..
T Consensus 324 YevFEkD~vKy~~Ye~AI~~-------Al~d-~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp 395 (637)
T 4gqb_A 324 YEVFEKDPIKYSQYQQAIYK-------CLLD-RVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP 395 (637)
T ss_dssp HHHHTTCHHHHHHHHHHHHH-------HHHH-HSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH
T ss_pred hhhhcCChhhHHHHHHHHHH-------HHHH-hhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH
Confidence 67777788777788877532 1111 11100 12346799999999998443333 32 234789999744
Q ss_pred HHhcCCC-------CCCeEEEeCCCCC-CCCC-ceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 168 VVANLPE-------TDNLKYIAGDMFQ-FVPP-ADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 168 ~i~~a~~-------~~rv~~~~gD~~~-~~p~-~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+...+++ .++|+++.+|+.+ .+|+ +|+|+.-+.=+..-.|....+|....+-|||||+
T Consensus 396 ~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGi 462 (637)
T 4gqb_A 396 NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGV 462 (637)
T ss_dssp HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEE
T ss_pred HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcE
Confidence 4444432 7899999999998 7885 9999887766555556666777777888999974
No 263
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.45 E-value=9.1e-08 Score=84.14 Aligned_cols=93 Identities=16% Similarity=0.124 Sum_probs=70.8
Q ss_pred CCCeEEEecCCCcHHHHHHHHHC-------------CCCeEEEeec-hHHHhcCCC------CC--CeEEEeCCCCC-CC
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAF-------------PGIKCTVLDL-PHVVANLPE------TD--NLKYIAGDMFQ-FV 189 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~-------------p~~~~~~~Dl-p~~i~~a~~------~~--rv~~~~gD~~~-~~ 189 (228)
...+|+|.|||+|.++..+++.. +..+++++|+ |.+++.++. .. +++++++|.+. +.
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 45699999999999999988763 4568999999 877776653 22 78899999988 33
Q ss_pred C-CceEeeehhhhcCCChh---------------HHHHHHHHHHHHhccCCC
Q 038208 190 P-PADAFLFKLVFHGLGDE---------------DGLKILKKRREAIASNGE 225 (228)
Q Consensus 190 p-~~D~v~~~~vlh~~~d~---------------~~~~il~~~~~aL~pgG~ 225 (228)
. .||+|+++-.++..... ....+++++.+.|+|||.
T Consensus 251 ~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~ 302 (445)
T 2okc_A 251 STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGR 302 (445)
T ss_dssp SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCE
Confidence 3 59999998665542211 124789999999999974
No 264
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.38 E-value=4.2e-07 Score=79.45 Aligned_cols=87 Identities=13% Similarity=0.149 Sum_probs=64.2
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCCCCC-CceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQFVP-PADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~~~p-~~D~v~~~~vlh 202 (228)
..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.+++ .+ ++|+.+|+.+..+ .||+|++.-.-.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRA 364 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTT
T ss_pred cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCcc
Confidence 456789999999999999999986 458999999 888887764 23 9999999988544 599999843321
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
... ..+++.+. .|+|+|+
T Consensus 365 g~~----~~~~~~l~-~l~p~gi 382 (425)
T 2jjq_A 365 GLH----PRLVKRLN-REKPGVI 382 (425)
T ss_dssp CSC----HHHHHHHH-HHCCSEE
T ss_pred chH----HHHHHHHH-hcCCCcE
Confidence 111 13444443 4899864
No 265
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.29 E-value=5.6e-07 Score=82.24 Aligned_cols=123 Identities=15% Similarity=0.106 Sum_probs=80.9
Q ss_pred hhhcccCccHHHHHHHHHHhccchhHHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHH----C---------CCCeE
Q 038208 94 WEFLNQNPGINQRFNEAMASDSEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEA----F---------PGIKC 160 (228)
Q Consensus 94 ~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~----~---------p~~~~ 160 (228)
||-+++|+-+...|.+++... +.+... .-.+...|+|||||+|.++...+++ . ...++
T Consensus 379 Ye~fekD~vRy~~Y~~AI~~a--------l~d~~~-~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kV 449 (745)
T 3ua3_A 379 YNTFEQDQIKYDVYGEAVVGA--------LKDLGA-DGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKL 449 (745)
T ss_dssp HHHHHHCHHHHHHHHHHHHHH--------HHHHHT-TCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEE
T ss_pred HHHHcCChhhHHHHHHHHHHH--------HHHhhc-ccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEE
Confidence 566666776666676665331 220111 0123468999999999997533222 1 23589
Q ss_pred EEeec-hHHHhcCCC------CCCeEEEeCCCCC-CC------C-CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 161 TVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FV------P-PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 161 ~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~------p-~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
+++|- |..+...+. .++|+++.+|+.+ .+ | .+|+|+.-+.=.....|.....|..+.+-|||||+
T Consensus 450 yAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi 529 (745)
T 3ua3_A 450 YIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTI 529 (745)
T ss_dssp EEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCE
T ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcE
Confidence 99998 543322221 6889999999988 55 4 49999888776555556566778888889999974
No 266
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.29 E-value=3e-06 Score=72.67 Aligned_cols=92 Identities=25% Similarity=0.400 Sum_probs=66.3
Q ss_pred CCeEEEecCCCcHHHHHH--------HHHC-------CCCeEEEeechH-----H---HhcCCC--------------CC
Q 038208 134 LGSLVDVGGGNGSFSRII--------SEAF-------PGIKCTVLDLPH-----V---VANLPE--------------TD 176 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l--------~~~~-------p~~~~~~~Dlp~-----~---i~~a~~--------------~~ 176 (228)
.-+|+|+|||+|..+..+ .+++ |.+++..-|+|. + ++..++ .-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 578999999999988776 4444 889999999963 1 222111 01
Q ss_pred CeEEEeCCCCC-CCC--CceEeeehhhhcCCCh--h----------------------------------HHHHHHHHHH
Q 038208 177 NLKYIAGDMFQ-FVP--PADAFLFKLVFHGLGD--E----------------------------------DGLKILKKRR 217 (228)
Q Consensus 177 rv~~~~gD~~~-~~p--~~D~v~~~~vlh~~~d--~----------------------------------~~~~il~~~~ 217 (228)
-+.-+++.|.. .+| .+|+++++.+||..++ + +-..+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 14456777776 577 3999999999997662 1 3456799999
Q ss_pred HHhccCCC
Q 038208 218 EAIASNGE 225 (228)
Q Consensus 218 ~aL~pgG~ 225 (228)
+.|+|||.
T Consensus 213 ~eL~pGG~ 220 (374)
T 3b5i_A 213 AEVKRGGA 220 (374)
T ss_dssp HHEEEEEE
T ss_pred HHhCCCCE
Confidence 99999963
No 267
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.28 E-value=7.7e-07 Score=82.48 Aligned_cols=93 Identities=13% Similarity=0.139 Sum_probs=70.8
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC-------C-CCeEEEeCCCCCC---CC-CceEeeeh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE-------T-DNLKYIAGDMFQF---VP-PADAFLFK 198 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~-------~-~rv~~~~gD~~~~---~p-~~D~v~~~ 198 (228)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++ . ++++++.+|+++. .. .||+|++.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred cCCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 456799999999999999999853 346999999 888887764 2 5899999999872 22 49999874
Q ss_pred hhhc--------CCC-hhHHHHHHHHHHHHhccCCC
Q 038208 199 LVFH--------GLG-DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 199 ~vlh--------~~~-d~~~~~il~~~~~aL~pgG~ 225 (228)
-.-. .+. ...-..+++++.+.|+|||.
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~ 652 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGT 652 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEE
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 3221 121 24557889999999999974
No 268
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.16 E-value=4.1e-06 Score=68.37 Aligned_cols=95 Identities=12% Similarity=0.095 Sum_probs=61.0
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeech-HHHhcCCC----CCCeEEEeCCCCC-CCC--CceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLP-HVVANLPE----TDNLKYIAGDMFQ-FVP--PADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp-~~i~~a~~----~~rv~~~~gD~~~-~~p--~~D~v~~~~vlh 202 (228)
+....+|||||||+|.|+..++++.+..+++++|+- ........ ..++..+..++.. .++ .+|+|++....+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apn 151 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGES 151 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccC
Confidence 456679999999999999998887666567777763 21111111 1144445555422 344 499999877554
Q ss_pred ---CCChh-HHHHHHHHHHHHhccC-CC
Q 038208 203 ---GLGDE-DGLKILKKRREAIASN-GE 225 (228)
Q Consensus 203 ---~~~d~-~~~~il~~~~~aL~pg-G~ 225 (228)
.|-|. ....+|+.+.+.|+|| |.
T Consensus 152 sG~~~~D~~rs~~LL~~a~~~LkpG~G~ 179 (277)
T 3evf_A 152 SSSSVTEGERTVRVLDTVEKWLACGVDN 179 (277)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred cCchHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 23233 3345789999999999 63
No 269
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.14 E-value=1.2e-06 Score=71.63 Aligned_cols=71 Identities=13% Similarity=0.200 Sum_probs=54.9
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-h-------HHHhcCCC-------CCCeEEEeCCCCCC---C---
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-P-------HVVANLPE-------TDNLKYIAGDMFQF---V--- 189 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p-------~~i~~a~~-------~~rv~~~~gD~~~~---~--- 189 (228)
.....+|||+|||+|..+..+++. ..+++++|+ | .+++.+++ ..|++++.+|+.+. +
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 345679999999999999999996 568999999 7 67766653 35799999999762 3
Q ss_pred -CCceEeeehhhhcC
Q 038208 190 -PPADAFLFKLVFHG 203 (228)
Q Consensus 190 -p~~D~v~~~~vlh~ 203 (228)
..||+|++.-.++.
T Consensus 159 ~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 159 QGKPDIVYLDPMYPE 173 (258)
T ss_dssp HCCCSEEEECCCC--
T ss_pred CCCccEEEECCCCCC
Confidence 35999998765543
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.10 E-value=5.9e-06 Score=76.54 Aligned_cols=95 Identities=13% Similarity=0.074 Sum_probs=68.8
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHH------------------------------------------CCCCeEEEeec-hH
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEA------------------------------------------FPGIKCTVLDL-PH 167 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~------------------------------------------~p~~~~~~~Dl-p~ 167 (228)
+....+|||.+||+|.++++.+.. .++.+++++|+ |.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 556789999999999999988764 23468999999 88
Q ss_pred HHhcCCC-------CCCeEEEeCCCCC-CCC----CceEeeehhhhcC-C-ChhHHHHHHHHHHHHhc---cCCC
Q 038208 168 VVANLPE-------TDNLKYIAGDMFQ-FVP----PADAFLFKLVFHG-L-GDEDGLKILKKRREAIA---SNGE 225 (228)
Q Consensus 168 ~i~~a~~-------~~rv~~~~gD~~~-~~p----~~D~v~~~~vlh~-~-~d~~~~~il~~~~~aL~---pgG~ 225 (228)
+++.|+. .++|++..+|+.+ ..| .+|+|+++-.... + .+++...+.+.+.+.|+ |||.
T Consensus 268 av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~ 342 (703)
T 3v97_A 268 VIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWN 342 (703)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCe
Confidence 9887764 4569999999977 223 5899998744332 2 23455667776666665 5753
No 271
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.09 E-value=1.3e-05 Score=59.33 Aligned_cols=74 Identities=16% Similarity=0.074 Sum_probs=52.9
Q ss_pred ccCCCeEEEecCCCc-HHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCC----CceEeeehhhhcCC
Q 038208 131 FEGLGSLVDVGGGNG-SFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQFVP----PADAFLFKLVFHGL 204 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G-~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~~p----~~D~v~~~~vlh~~ 204 (228)
.....++||||||+| ..+..|++. .+..+++.|+ |..++ ++..|+|++.. +||+|+..+.
T Consensus 33 ~~~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLIYsirP---- 98 (153)
T 2k4m_A 33 SGPGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALIYSIRP---- 98 (153)
T ss_dssp SCSSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEEEEESC----
T ss_pred CCCCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc---------eEEccCCCCcccccCCcCEEEEcCC----
Confidence 445679999999999 588888764 3788999998 55554 99999999654 6999977652
Q ss_pred ChhHHHHHHHHHHHH
Q 038208 205 GDEDGLKILKKRREA 219 (228)
Q Consensus 205 ~d~~~~~il~~~~~a 219 (228)
| .+...-+.++++.
T Consensus 99 P-~El~~~i~~lA~~ 112 (153)
T 2k4m_A 99 P-AEIHSSLMRVADA 112 (153)
T ss_dssp C-TTTHHHHHHHHHH
T ss_pred C-HHHHHHHHHHHHH
Confidence 3 3334444444443
No 272
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.09 E-value=4.7e-06 Score=71.63 Aligned_cols=72 Identities=18% Similarity=0.191 Sum_probs=50.3
Q ss_pred CCeEEEecCCCcHHHHHHHHH-----------------CCCCeEEEeech-----------H-HHhcCC----CCCC---
Q 038208 134 LGSLVDVGGGNGSFSRIISEA-----------------FPGIKCTVLDLP-----------H-VVANLP----ETDN--- 177 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~-----------------~p~~~~~~~Dlp-----------~-~i~~a~----~~~r--- 177 (228)
.-+|+|+||++|..+..+... .|+++++.-|+| . ..+..+ ...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999988877766 578899999998 1 111110 0112
Q ss_pred eEEEeCCCCC-CCC--CceEeeehhhhcCCC
Q 038208 178 LKYIAGDMFQ-FVP--PADAFLFKLVFHGLG 205 (228)
Q Consensus 178 v~~~~gD~~~-~~p--~~D~v~~~~vlh~~~ 205 (228)
+.-++|.|.. .+| .+|+++++.+||..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls 163 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLS 163 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCS
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecC
Confidence 3345566766 577 399999999999654
No 273
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.08 E-value=1e-05 Score=67.78 Aligned_cols=67 Identities=12% Similarity=0.101 Sum_probs=54.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-C--C---CCceEee
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-F--V---PPADAFL 196 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~--~---p~~D~v~ 196 (228)
.....+|||+|||+|..+..+++.. +..+++++|+ +..++.+++ ..+|+++.+|+.+ + . ..||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 4567899999999999999999985 5689999999 777776653 3689999999876 2 1 2489998
Q ss_pred e
Q 038208 197 F 197 (228)
Q Consensus 197 ~ 197 (228)
+
T Consensus 180 ~ 180 (309)
T 2b9e_A 180 L 180 (309)
T ss_dssp E
T ss_pred E
Confidence 6
No 274
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.04 E-value=5.4e-06 Score=71.30 Aligned_cols=87 Identities=9% Similarity=0.021 Sum_probs=67.5
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----C-----------------CCeEEEeCCCCCC--
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----T-----------------DNLKYIAGDMFQF-- 188 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~-----------------~rv~~~~gD~~~~-- 188 (228)
...+|||+|||+|..+..++++.+..+++++|+ +..++.+++ . ++++++.+|..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 567999999999999999999988889999999 777765543 1 2389999998662
Q ss_pred -CC-CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 189 -VP-PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 189 -~p-~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.+ .||+|++-- . .+ ...++..+.+.|+|||.
T Consensus 127 ~~~~~fD~I~lDP-~--~~---~~~~l~~a~~~lk~gG~ 159 (378)
T 2dul_A 127 ERHRYFHFIDLDP-F--GS---PMEFLDTALRSAKRRGI 159 (378)
T ss_dssp HSTTCEEEEEECC-S--SC---CHHHHHHHHHHEEEEEE
T ss_pred hccCCCCEEEeCC-C--CC---HHHHHHHHHHhcCCCCE
Confidence 23 499998432 1 11 24788999999999974
No 275
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.02 E-value=1.2e-06 Score=75.18 Aligned_cols=52 Identities=25% Similarity=0.336 Sum_probs=44.0
Q ss_pred CCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC
Q 038208 134 LGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ 187 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~ 187 (228)
..+|||+|||+|.++..+++.. .+++++|+ +.+++.+++ .++++++.+|..+
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~ 272 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEE 272 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHH
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 4689999999999999998853 58999999 888887764 3689999999865
No 276
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.01 E-value=3.7e-06 Score=71.91 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=68.0
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--------------CCCeEEEeCCCCCCC-------C
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE--------------TDNLKYIAGDMFQFV-------P 190 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~--------------~~rv~~~~gD~~~~~-------p 190 (228)
++++||-||+|.|..++++++. |..+++++|+ |.|++.+++ .+|++++.+|..+-+ .
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 4679999999999999999984 5578999999 888876542 367999999986521 2
Q ss_pred CceEeeehhhhcC-------CC-hhHHHHHHHHHHHHhccCCC
Q 038208 191 PADAFLFKLVFHG-------LG-DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 191 ~~D~v~~~~vlh~-------~~-d~~~~~il~~~~~aL~pgG~ 225 (228)
.||+|++=-.=.. .. ..-...+++.++++|+|||+
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GV 326 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGK 326 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCE
Confidence 4999986422110 01 12235788999999999985
No 277
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.97 E-value=1.4e-05 Score=68.20 Aligned_cols=94 Identities=19% Similarity=0.315 Sum_probs=64.3
Q ss_pred cCCCeEEEecCCCcHHHHHHHHH----------------CCCCeEEEeechH-----HHhcCCC---CCC---eEEEeCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEA----------------FPGIKCTVLDLPH-----VVANLPE---TDN---LKYIAGD 184 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~----------------~p~~~~~~~Dlp~-----~i~~a~~---~~r---v~~~~gD 184 (228)
++.-+|+|+||++|..+..+... .|.++++.-|+|. +-..... ..+ +.-++|.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 34568999999999765543332 5778899999963 2222211 112 3446677
Q ss_pred CCC-CCC--CceEeeehhhhcCCCh-------------------------------hHHHHHHHHHHHHhccCCC
Q 038208 185 MFQ-FVP--PADAFLFKLVFHGLGD-------------------------------EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 185 ~~~-~~p--~~D~v~~~~vlh~~~d-------------------------------~~~~~il~~~~~aL~pgG~ 225 (228)
|.. .+| .+|+++.+..||..++ .+-..+|+..++.|+|||.
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~ 204 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGR 204 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 777 577 3999999999996653 1234569999999999973
No 278
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.91 E-value=9.7e-06 Score=72.93 Aligned_cols=93 Identities=14% Similarity=0.094 Sum_probs=67.8
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCC------------------CCeEEEeec-hHHHhcCCC------CCC-----eEEEe
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFP------------------GIKCTVLDL-PHVVANLPE------TDN-----LKYIA 182 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p------------------~~~~~~~Dl-p~~i~~a~~------~~r-----v~~~~ 182 (228)
...+|+|.+||+|.++..+.+... ..+++++|+ |.++..++. .+. +++.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 456999999999999998877532 247999999 777766542 232 88999
Q ss_pred CCCCC-C---CCCceEeeehhhhcCCC------------hhHHHHHHHHHHHHhccCCC
Q 038208 183 GDMFQ-F---VPPADAFLFKLVFHGLG------------DEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 183 gD~~~-~---~p~~D~v~~~~vlh~~~------------d~~~~~il~~~~~aL~pgG~ 225 (228)
+|.+. + .+.||+|+++-.+.... ...-..+++++.+.|+|||.
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 307 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGR 307 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCE
Confidence 99987 2 23599999875544321 11224789999999999974
No 279
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.90 E-value=4.8e-06 Score=71.91 Aligned_cols=87 Identities=10% Similarity=0.014 Sum_probs=67.6
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCC-CeEEEeec-hHHHhcCCC-------CCC-eEEEeCCCCCC----CC-CceEeee
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPG-IKCTVLDL-PHVVANLPE-------TDN-LKYIAGDMFQF----VP-PADAFLF 197 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-p~~i~~a~~-------~~r-v~~~~gD~~~~----~p-~~D~v~~ 197 (228)
+..+|||++||+|.++..++++.++ .+++.+|+ |..++.+++ .++ ++++.+|.++- .+ .||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 4679999999999999999998766 57999999 888877664 345 99999998652 23 4999987
Q ss_pred hhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 198 KLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 198 ~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
-- ...+ ..+++.+.+.|+|||.
T Consensus 132 DP--~g~~----~~~l~~a~~~Lk~gGl 153 (392)
T 3axs_A 132 DP--FGTP----VPFIESVALSMKRGGI 153 (392)
T ss_dssp CC--SSCC----HHHHHHHHHHEEEEEE
T ss_pred CC--CcCH----HHHHHHHHHHhCCCCE
Confidence 54 1111 3588999999999974
No 280
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.88 E-value=1.3e-05 Score=65.40 Aligned_cols=79 Identities=19% Similarity=0.265 Sum_probs=56.6
Q ss_pred HHHHHHhhhhhccCC--CeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHH-------HhcCC----C-C---CCeEEE
Q 038208 120 SFVVKAECKQIFEGL--GSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHV-------VANLP----E-T---DNLKYI 181 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~--~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~-------i~~a~----~-~---~rv~~~ 181 (228)
..+++ .+. +.+. .+|||++||+|..+..++++ ..+++++|+ |.+ ++.++ . . +|++++
T Consensus 76 e~l~~-al~--l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 76 EAVAK-AVG--IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp SHHHH-HTT--CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred HHHHH-Hhc--ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 33444 443 4455 79999999999999999998 568999999 644 32221 1 1 579999
Q ss_pred eCCCCC---CCC-CceEeeehhhhcC
Q 038208 182 AGDMFQ---FVP-PADAFLFKLVFHG 203 (228)
Q Consensus 182 ~gD~~~---~~p-~~D~v~~~~vlh~ 203 (228)
++|..+ .++ .||+|++--..+.
T Consensus 151 ~~D~~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 151 HASSLTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp ESCHHHHSTTCSSCCSEEEECCCCCC
T ss_pred ECCHHHHHHhCcccCCEEEEcCCCCC
Confidence 999865 233 4999998766654
No 281
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.87 E-value=1.4e-05 Score=65.40 Aligned_cols=94 Identities=20% Similarity=0.270 Sum_probs=61.2
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCC-eEEEeC-CCCCCCC--CceEeeehhhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDN-LKYIAG-DMFQFVP--PADAFLFKLVF 201 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~r-v~~~~g-D~~~~~p--~~D~v~~~~vl 201 (228)
+....+|||||||+|.|+...+++.+...++++|+ ......+.. ..+ +.+... |+.. ++ .+|+|++-...
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~-l~~~~~DvVLSDmAp 166 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFN-MEVIPGDTLLCDIGE 166 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGG-SCCCCCSEEEECCCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhh-cCCCCcCEEEecCcc
Confidence 55667999999999999999998877777888888 222222221 223 334433 4433 33 49999887665
Q ss_pred cC---CChh-HHHHHHHHHHHHhccC--CC
Q 038208 202 HG---LGDE-DGLKILKKRREAIASN--GE 225 (228)
Q Consensus 202 h~---~~d~-~~~~il~~~~~aL~pg--G~ 225 (228)
+. +-|. ....+|+-+.+.|+|| |.
T Consensus 167 nsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~ 196 (282)
T 3gcz_A 167 SSPSIAVEEQRTLRVLNCAKQWLQEGNYTE 196 (282)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred CCCChHHHHHHHHHHHHHHHHHcCCCCCCc
Confidence 51 1122 2335788889999999 63
No 282
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.75 E-value=1.2e-05 Score=69.67 Aligned_cols=63 Identities=13% Similarity=0.193 Sum_probs=52.0
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----C----CCeEEEeCCCCCC---CC--CceEeee
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----T----DNLKYIAGDMFQF---VP--PADAFLF 197 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~----~rv~~~~gD~~~~---~p--~~D~v~~ 197 (228)
...+|||+|||+|..+..+++. ..+++++|+ +.+++.++. . ++++++++|+.+. .+ .||+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 3689999999999999999887 468999999 888877653 1 5799999999873 22 5999988
No 283
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.73 E-value=4.7e-05 Score=62.47 Aligned_cols=75 Identities=23% Similarity=0.220 Sum_probs=58.2
Q ss_pred hHHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC-C--C--
Q 038208 118 MTSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE--TDNLKYIAGDMFQ-F--V-- 189 (228)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~--~~rv~~~~gD~~~-~--~-- 189 (228)
+...+++ .+. ......+||.+||.|.++..|+++ +.+++++|. |.+++.+++ .+|++++.+||.+ + +
T Consensus 10 Ll~e~le-~L~--~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 10 LYQEALD-LLA--VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp THHHHHH-HHT--CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHH
T ss_pred HHHHHHH-hhC--CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHH
Confidence 3456666 665 556789999999999999999998 789999999 888765532 2699999999966 2 1
Q ss_pred ---CCceEeee
Q 038208 190 ---PPADAFLF 197 (228)
Q Consensus 190 ---p~~D~v~~ 197 (228)
..+|.|++
T Consensus 85 ~g~~~vDgIL~ 95 (285)
T 1wg8_A 85 LGVERVDGILA 95 (285)
T ss_dssp TTCSCEEEEEE
T ss_pred cCCCCcCEEEe
Confidence 24788775
No 284
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.68 E-value=2.7e-05 Score=63.39 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=61.2
Q ss_pred CCCeEEEecCCCcHHHHHHHHH-------CCC-----CeEEEeec-h---HHHhcC-----------C------------
Q 038208 133 GLGSLVDVGGGNGSFSRIISEA-------FPG-----IKCTVLDL-P---HVVANL-----------P------------ 173 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~-------~p~-----~~~~~~Dl-p---~~i~~a-----------~------------ 173 (228)
+..+|||||+|+|..+..+++. +|+ ++++.+|. | +.+..+ +
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999998887664 674 67899987 5 222211 0
Q ss_pred ------C--CCCeEEEeCCCCC---CCC-----CceEeeehh-hhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 174 ------E--TDNLKYIAGDMFQ---FVP-----PADAFLFKL-VFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 174 ------~--~~rv~~~~gD~~~---~~p-----~~D~v~~~~-vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
. ..+++++.||..+ .++ .||+|++-- .-...|+--...+|+.+++.|+|||+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~ 208 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGT 208 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcE
Confidence 1 2467899999866 232 489998732 11101110124689999999999974
No 285
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.65 E-value=0.00024 Score=59.97 Aligned_cols=92 Identities=13% Similarity=0.148 Sum_probs=76.8
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC---------------------------CCCeEEEeCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE---------------------------TDNLKYIAGD 184 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~---------------------------~~rv~~~~gD 184 (228)
.+...||.+|||.......+...+|+++++-+|+|++++.-++ .++.+++..|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 3568999999999999999999889999999999998864321 2789999999
Q ss_pred CCC-CC----------CC-ceEeeehhhhcCCChhHHHHHHHHHHHHhccCC
Q 038208 185 MFQ-FV----------PP-ADAFLFKLVFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 185 ~~~-~~----------p~-~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
+.+ +. ++ ..++++-.+|++++++++.++|+.+.+.. |+|
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~ 226 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHG 226 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSE
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCc
Confidence 987 22 12 68889999999999999999999999876 443
No 286
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.64 E-value=0.00019 Score=61.08 Aligned_cols=69 Identities=17% Similarity=0.255 Sum_probs=54.1
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEeCCCCCCCC---CceEeeehhhh
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETDNLKYIAGDMFQFVP---PADAFLFKLVF 201 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~~~p---~~D~v~~~~vl 201 (228)
+.+..++||+||++|.++..++++ +.+++++|+-++-......++|+++.+|.++..| .+|++++-.+.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVE 280 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCC
Confidence 456789999999999999999998 6899999974333333346899999999988333 38999876544
No 287
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.63 E-value=0.00013 Score=67.83 Aligned_cols=93 Identities=12% Similarity=0.117 Sum_probs=64.9
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCC---CCeEEEeec-hHHHhcC--CC----------CCCeEEEeCCCCCC----CCCc
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFP---GIKCTVLDL-PHVVANL--PE----------TDNLKYIAGDMFQF----VPPA 192 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p---~~~~~~~Dl-p~~i~~a--~~----------~~rv~~~~gD~~~~----~p~~ 192 (228)
...+|+|.|||+|.++.+++++.+ ..+++++|+ |.+++.+ +. .+...+...|++.+ ...|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 467999999999999999999886 357999999 7666655 10 22346677777762 2259
Q ss_pred eEeeehhhhcC-CChh-H-------------------------HHHHHHHHHHHhccCCC
Q 038208 193 DAFLFKLVFHG-LGDE-D-------------------------GLKILKKRREAIASNGE 225 (228)
Q Consensus 193 D~v~~~~vlh~-~~d~-~-------------------------~~~il~~~~~aL~pgG~ 225 (228)
|+|+++=..-. +..+ . ...+++++.+.|+|||.
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGr 460 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTV 460 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCE
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcE
Confidence 99988655421 2211 1 23467889999999974
No 288
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.53 E-value=3.8e-05 Score=69.07 Aligned_cols=92 Identities=18% Similarity=0.128 Sum_probs=65.4
Q ss_pred CCeEEEecCCCcHHHHHHHHHCC---------------CCeEEEeec-hHHHhcCCC-------CCCeEEEeCCCCC-C-
Q 038208 134 LGSLVDVGGGNGSFSRIISEAFP---------------GIKCTVLDL-PHVVANLPE-------TDNLKYIAGDMFQ-F- 188 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~p---------------~~~~~~~Dl-p~~i~~a~~-------~~rv~~~~gD~~~-~- 188 (228)
..+|+|.+||+|.++..+.+..+ ..+++++|+ |.++..++. ..++.+.++|.+. +
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~ 324 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ 324 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc
Confidence 45999999999999998765432 467999999 777776652 2345558999877 3
Q ss_pred CC--CceEeeehhhhc--CCChh-------------------------HHHHHHHHHHHHhccCCC
Q 038208 189 VP--PADAFLFKLVFH--GLGDE-------------------------DGLKILKKRREAIASNGE 225 (228)
Q Consensus 189 ~p--~~D~v~~~~vlh--~~~d~-------------------------~~~~il~~~~~aL~pgG~ 225 (228)
.+ .||+|+++=... .|..+ .-..+++.+.+.|+|||.
T Consensus 325 ~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 390 (544)
T 3khk_A 325 HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGS 390 (544)
T ss_dssp CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEE
T ss_pred cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCce
Confidence 23 499999864443 23221 113689999999999975
No 289
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.49 E-value=0.00014 Score=59.83 Aligned_cols=95 Identities=16% Similarity=0.207 Sum_probs=60.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeech-HHHhcCCC----C-CCeEEEeC-CCCCCCC-CceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLP-HVVANLPE----T-DNLKYIAG-DMFQFVP-PADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp-~~i~~a~~----~-~rv~~~~g-D~~~~~p-~~D~v~~~~vlh 202 (228)
+.+..+||||||++|.|+..++++.+-..++++|+. ........ . +-+.+..+ |++.-.+ .+|+|++-...+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~APn 158 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGES 158 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCcCC
Confidence 456789999999999999999987766678888883 21111110 1 22444444 5544222 489998765544
Q ss_pred --CCC-h-hHHHHHHHHHHHHhccC-CC
Q 038208 203 --GLG-D-EDGLKILKKRREAIASN-GE 225 (228)
Q Consensus 203 --~~~-d-~~~~~il~~~~~aL~pg-G~ 225 (228)
.+. | .....+|+-+.+.|+|| |.
T Consensus 159 sG~~~~D~~rs~~LL~~A~~~LkpG~G~ 186 (300)
T 3eld_A 159 SSNPLVERDRTMKVLENFERWKHVNTEN 186 (300)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCTTCCE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 111 1 12245688889999999 63
No 290
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.26 E-value=0.00076 Score=54.42 Aligned_cols=93 Identities=18% Similarity=0.193 Sum_probs=55.6
Q ss_pred hccCCCeEEEecCCCcHHHHHHHHHCCCCe----EEEeechHHHhcCCC-CCCe---EEEeC-CCCCCCC-CceEeeehh
Q 038208 130 IFEGLGSLVDVGGGNGSFSRIISEAFPGIK----CTVLDLPHVVANLPE-TDNL---KYIAG-DMFQFVP-PADAFLFKL 199 (228)
Q Consensus 130 ~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~----~~~~Dlp~~i~~a~~-~~rv---~~~~g-D~~~~~p-~~D~v~~~~ 199 (228)
.+.+..+|||+||+.|.|+...+++-+-.. +++.|+ + +..... ...+ .|+.+ |+++..+ .+|+|++=.
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~DvVLSDM 147 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEPMLMQSYGWNIVTMKSGVDVFYKPSEISDTLLCDI 147 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCCCCCCSTTGGGEEEECSCCGGGSCCCCCSEEEECC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCCCcccCCCceEEEeeccCCccCCCCCCCCEEEeCC
Confidence 356788999999999999999888621112 234443 1 111111 1455 55557 9987434 589997544
Q ss_pred hhc--CCChhH--HHHHHHHHHHHhccCC
Q 038208 200 VFH--GLGDED--GLKILKKRREAIASNG 224 (228)
Q Consensus 200 vlh--~~~d~~--~~~il~~~~~aL~pgG 224 (228)
.-. ++.-++ ....|.-+.+.|+|||
T Consensus 148 APnSG~~~vD~~Rs~~aL~~A~~~Lk~gG 176 (269)
T 2px2_A 148 GESSPSAEIEEQRTLRILEMVSDWLSRGP 176 (269)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhhcCC
Confidence 321 111122 1234667778999997
No 291
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.24 E-value=0.00036 Score=62.67 Aligned_cols=93 Identities=15% Similarity=0.058 Sum_probs=68.0
Q ss_pred CCCeEEEecCCCcHHHHHHHHHC---CCCeEEEeec-hHHHhcCCC--------CCCeEEEeCCCCCC-CC-----CceE
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAF---PGIKCTVLDL-PHVVANLPE--------TDNLKYIAGDMFQF-VP-----PADA 194 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~---p~~~~~~~Dl-p~~i~~a~~--------~~rv~~~~gD~~~~-~p-----~~D~ 194 (228)
...+|+|.+||+|.++..+.+.. +..+++++|+ +.++..++. .+++.+.++|.+.. +| .||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 45699999999999999999885 3678999999 777766652 25789999999873 22 3999
Q ss_pred eeehhhhc-CCChh--------------------HHHHHHHHHHHHhc-cCCC
Q 038208 195 FLFKLVFH-GLGDE--------------------DGLKILKKRREAIA-SNGE 225 (228)
Q Consensus 195 v~~~~vlh-~~~d~--------------------~~~~il~~~~~aL~-pgG~ 225 (228)
|+.+=... .|..+ .-..+++++.+.|+ |||.
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr 353 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGV 353 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCcee
Confidence 99763221 12110 01358999999999 9975
No 292
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.23 E-value=0.00072 Score=56.43 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=72.2
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCC-CCeEEEeechHHHhcCC---------CCCCeEEEeCCCCCCC----------C-
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFP-GIKCTVLDLPHVVANLP---------ETDNLKYIAGDMFQFV----------P- 190 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dlp~~i~~a~---------~~~rv~~~~gD~~~~~----------p- 190 (228)
.+...||+||||-=.....+. .| +++++-+|.|.+++..+ ..++..++..|+.+.+ +
T Consensus 101 ~g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 101 DGIRQFVILASGLDSRAYRLD--WPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TTCCEEEEETCTTCCHHHHSC--CCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred hCCCeEEEeCCCCCchhhhcc--CCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 356789999999988866654 34 47899999999887533 2578999999997521 1
Q ss_pred CceEeeehhhhcCCChhHHHHHHHHHHHHhccCC
Q 038208 191 PADAFLFKLVFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 191 ~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
..-++++-.+||++++++...+++.+.+.+.||+
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs 212 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGS 212 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCe
Confidence 2567788899999999999999999999988874
No 293
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.12 E-value=0.001 Score=55.92 Aligned_cols=67 Identities=19% Similarity=0.229 Sum_probs=55.0
Q ss_pred hHHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHC-CCCeEEEeec-hHHHhcCCC--CCCeEEEeCCCCC
Q 038208 118 MTSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAF-PGIKCTVLDL-PHVVANLPE--TDNLKYIAGDMFQ 187 (228)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~--~~rv~~~~gD~~~ 187 (228)
+..++++ .+. ..+...+||..+|.|..+..|+++. |+.+++++|. |.+++.++. .+|++++.++|.+
T Consensus 45 Ll~Evl~-~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 45 LLDEAVN-GLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSA 115 (347)
T ss_dssp TTHHHHH-HTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGG
T ss_pred cHHHHHH-hhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHH
Confidence 3456666 554 4567899999999999999999985 8899999999 888887643 5799999999865
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.01 E-value=0.0014 Score=52.33 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=58.8
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCC--C---CCCeEEEeC-CCCC-CCCCceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLP--E---TDNLKYIAG-DMFQ-FVPPADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~--~---~~rv~~~~g-D~~~-~~p~~D~v~~~~vlh 202 (228)
+....+||||||++|.++...+......++.++|+ +.-.+.-+ + -+.|+|..+ |++. +.-.+|++++-.-=.
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~DtllcDIgeS 155 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKCDTLLCDIGES 155 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccccEEEEecCCC
Confidence 55667999999999999998888776668999998 32222111 1 467999999 9765 222488887644332
Q ss_pred CCC-hhHH---HHHHHHHHHHhcc
Q 038208 203 GLG-DEDG---LKILKKRREAIAS 222 (228)
Q Consensus 203 ~~~-d~~~---~~il~~~~~aL~p 222 (228)
.-+ .-+. .++|.-+.+.|++
T Consensus 156 s~~~~vE~~RtlrvLela~~wL~~ 179 (267)
T 3p8z_A 156 SPSPTVEESRTIRVLKMVEPWLKN 179 (267)
T ss_dssp CSCHHHHHHHHHHHHHHHGGGCSS
T ss_pred CCChhhhhhHHHHHHHHHHHhccc
Confidence 222 1122 2345555566665
No 295
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.80 E-value=0.0018 Score=55.14 Aligned_cols=95 Identities=14% Similarity=0.115 Sum_probs=67.5
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCC------------CCCCeEEEeCCCCC--C-CC-Cce
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLP------------ETDNLKYIAGDMFQ--F-VP-PAD 193 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~------------~~~rv~~~~gD~~~--~-~p-~~D 193 (228)
.....+|||+++|.|.=+..|++..++.+++..|+ +.-+..++ ...++.+...|... + .+ .||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 45678999999999999999999887778999998 54333221 13678999999876 2 33 499
Q ss_pred Eeee----h----hhh-------cCCChhH-------HHHHHHHHHHHhccCCC
Q 038208 194 AFLF----K----LVF-------HGLGDED-------GLKILKKRREAIASNGE 225 (228)
Q Consensus 194 ~v~~----~----~vl-------h~~~d~~-------~~~il~~~~~aL~pgG~ 225 (228)
.|++ + .++ +.|..++ -.+||+++.+.|||||.
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~ 279 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGH 279 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEE
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 9975 1 112 2233222 25789999999999974
No 296
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=96.73 E-value=0.0029 Score=49.40 Aligned_cols=85 Identities=13% Similarity=0.125 Sum_probs=57.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC---------CCCeEEEeCCCCCC------------
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE---------TDNLKYIAGDMFQF------------ 188 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~---------~~rv~~~~gD~~~~------------ 188 (228)
+.+..+||+||+| .-+..+++ .++.+++.+|. ++..+.+++ .++|+++.+|..+-
T Consensus 28 l~~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 28 YEEAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHHCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hhCCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 4567899999985 55556665 46789999998 666655542 45899999996431
Q ss_pred ------------C---CCceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 189 ------------V---PPADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 189 ------------~---p~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
. ..||+|++--- . ...-+..+.+.|+|||+
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~------k-~~~~~~~~l~~l~~GG~ 149 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGR------F-RVGCALATAFSITRPVT 149 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSS------S-HHHHHHHHHHHCSSCEE
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCC------C-chhHHHHHHHhcCCCeE
Confidence 1 23899987541 1 12445556788999974
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.58 E-value=0.0084 Score=49.29 Aligned_cols=92 Identities=15% Similarity=0.224 Sum_probs=58.7
Q ss_pred ccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhc--CCC---CCCeEEEeC-CCCC-CCCCceEeeehhhhc
Q 038208 131 FEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVAN--LPE---TDNLKYIAG-DMFQ-FVPPADAFLFKLVFH 202 (228)
Q Consensus 131 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~--a~~---~~rv~~~~g-D~~~-~~p~~D~v~~~~vlh 202 (228)
+....+||||||++|.++...+......++.++|+ ..-.+. ..+ -.-|.+..+ |++. +...+|++++--- -
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~~D~ivcDig-e 170 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSECCDTLLCDIG-E 170 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCCCSEEEECCC-C
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCCCCEEEEECc-c
Confidence 45567999999999999998777765557999998 221111 001 234889998 9765 2224788775433 2
Q ss_pred CCCh----h-HHHHHHHHHHHHhccC
Q 038208 203 GLGD----E-DGLKILKKRREAIASN 223 (228)
Q Consensus 203 ~~~d----~-~~~~il~~~~~aL~pg 223 (228)
.-+. + ...++|.-+-+.|++|
T Consensus 171 Ss~~~~ve~~Rtl~vLel~~~wL~~~ 196 (321)
T 3lkz_A 171 SSSSAEVEEHRTIRVLEMVEDWLHRG 196 (321)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCChhhhhhHHHHHHHHHHHHhccC
Confidence 2221 1 1234677777888877
No 298
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.54 E-value=0.0035 Score=53.20 Aligned_cols=54 Identities=19% Similarity=0.207 Sum_probs=43.1
Q ss_pred CCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCC---CCCCeEEEeCCCCC
Q 038208 134 LGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLP---ETDNLKYIAGDMFQ 187 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~---~~~rv~~~~gD~~~ 187 (228)
...|||||.|.|.++..|+++....+++++++ +..++..+ ..++++++.+|+++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 57899999999999999999754457999988 55544332 25799999999975
No 299
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.52 E-value=0.004 Score=51.20 Aligned_cols=90 Identities=14% Similarity=0.172 Sum_probs=63.9
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHC-----CCCeEEEeec-h---H-----------------------HHhcCCC-----
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAF-----PGIKCTVLDL-P---H-----------------------VVANLPE----- 174 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~-----p~~~~~~~Dl-p---~-----------------------~i~~a~~----- 174 (228)
..+..||+||+..|..+..+++.. |+.+++++|. . + .++.+++
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 357899999999999998887654 5788999994 1 1 1111111
Q ss_pred ---CCCeEEEeCCCCCC---CC--CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 175 ---TDNLKYIAGDMFQF---VP--PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 175 ---~~rv~~~~gD~~~~---~p--~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.++|+++.||+.+. .+ .+|++++=. ++. +.....|..+...|+|||+
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDa---D~y-~~~~~~Le~~~p~L~pGGi 239 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDG---DLY-ESTWDTLTNLYPKVSVGGY 239 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECC---CSH-HHHHHHHHHHGGGEEEEEE
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcC---Ccc-ccHHHHHHHHHhhcCCCEE
Confidence 38999999999763 32 378887654 221 3346789999999999975
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.03 E-value=0.0064 Score=50.17 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=34.5
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE 174 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~ 174 (228)
....+|||++||+|..+.++++. +.+++++|+ |.+++.+++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 35679999999999999998886 568999999 888876653
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.90 E-value=0.016 Score=47.67 Aligned_cols=88 Identities=13% Similarity=0.104 Sum_probs=58.8
Q ss_pred ccCCCeEEEecC------CCcHHHHHHHHHCCC-CeEEEeechHHHhcCCCCCCeEEEeCCCCC-CC-CCceEeeehhh-
Q 038208 131 FEGLGSLVDVGG------GNGSFSRIISEAFPG-IKCTVLDLPHVVANLPETDNLKYIAGDMFQ-FV-PPADAFLFKLV- 200 (228)
Q Consensus 131 ~~~~~~vlDvGg------G~G~~~~~l~~~~p~-~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~-~~-p~~D~v~~~~v- 200 (228)
.+...+|||+|+ -+|.+ .+.+..|. ..++.+|+.++...+ . .++.||+.+ .. ..+|+|++=..
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sda----~-~~IqGD~~~~~~~~k~DLVISDMAP 179 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSDA----D-STLIGDCATVHTANKWDLIISDMYD 179 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCSS----S-EEEESCGGGEEESSCEEEEEECCCC
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccCC----C-eEEEccccccccCCCCCEEEecCCC
Confidence 356789999995 77774 34455786 689999995544321 2 459999876 22 34999965321
Q ss_pred ------hcCC--ChhHHHHHHHHHHHHhccCCC
Q 038208 201 ------FHGL--GDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 201 ------lh~~--~d~~~~~il~~~~~aL~pgG~ 225 (228)
-++- ...-+..+|.=+.+.|+|||.
T Consensus 180 NtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGs 212 (344)
T 3r24_A 180 PRTKHVTKENDSKEGFFTYLCGFIKQKLALGGS 212 (344)
T ss_dssp TTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEE
T ss_pred CcCCccccchhHHHHHHHHHHHHHHHhCcCCCE
Confidence 1111 233577788889999999974
No 302
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=95.53 E-value=0.15 Score=42.86 Aligned_cols=91 Identities=14% Similarity=0.197 Sum_probs=72.7
Q ss_pred CCCeEEEecCCCcHHHHHHHHH-CCCCeEEEeechHHHhcCC-----------------------------CCCCeEEEe
Q 038208 133 GLGSLVDVGGGNGSFSRIISEA-FPGIKCTVLDLPHVVANLP-----------------------------ETDNLKYIA 182 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dlp~~i~~a~-----------------------------~~~rv~~~~ 182 (228)
+...||-+|||.=.....+... .++++++=+|+|++++.-+ ..++.+++.
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 4679999999999999988875 3678899999999886311 147899999
Q ss_pred CCCCC--C---------CC-C-ceEeeehhhhcCCChhHHHHHHHHHHHHhccC
Q 038208 183 GDMFQ--F---------VP-P-ADAFLFKLVFHGLGDEDGLKILKKRREAIASN 223 (228)
Q Consensus 183 gD~~~--~---------~p-~-~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pg 223 (228)
.|+.+ . +. + .-++++-.+|.+++++++..+|+.+.+..+++
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~~ 223 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERA 223 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSE
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCCc
Confidence 99976 1 12 2 56788888999999999999999999876543
No 303
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.82 E-value=0.011 Score=62.00 Aligned_cols=89 Identities=17% Similarity=0.169 Sum_probs=43.9
Q ss_pred CCeEEEecCCCcHHHHHHHHHCCC-----CeEEEeec-hHHHhcCCCC---CCeEEEeCCCCCC---CC-CceEeeehhh
Q 038208 134 LGSLVDVGGGNGSFSRIISEAFPG-----IKCTVLDL-PHVVANLPET---DNLKYIAGDMFQF---VP-PADAFLFKLV 200 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~p~-----~~~~~~Dl-p~~i~~a~~~---~rv~~~~gD~~~~---~p-~~D~v~~~~v 200 (228)
..+||+||.|+|..+..+++...+ .+++.-|+ +...+.+++. -.++.-.-|...+ .+ .||+|+..++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 458999999999887777766432 25777788 6666666541 1233222233222 12 4999999999
Q ss_pred hcCCChhHHHHHHHHHHHHhccCC
Q 038208 201 FHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 201 lh~~~d~~~~~il~~~~~aL~pgG 224 (228)
||.-++. ...|+++++.|+|||
T Consensus 1321 l~~t~~~--~~~l~~~~~lL~p~G 1342 (2512)
T 2vz8_A 1321 LATLGDP--AVAVGNMAATLKEGG 1342 (2512)
T ss_dssp ----------------------CC
T ss_pred ccccccH--HHHHHHHHHhcCCCc
Confidence 9966544 567999999999997
No 304
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=94.65 E-value=0.055 Score=48.32 Aligned_cols=89 Identities=13% Similarity=0.033 Sum_probs=59.0
Q ss_pred CCCeEEEecCCCcHHHHHHHHHC-------------CCCeEEEeec-hHHHhcCCC------CCCeEEEeCCCCC-CC--
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAF-------------PGIKCTVLDL-PHVVANLPE------TDNLKYIAGDMFQ-FV-- 189 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~-------------p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~gD~~~-~~-- 189 (228)
...+|+|-.||+|.++....+.. ....+.++|+ +.+...++. .+.-.+..+|.+. +.
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~ 296 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLRE 296 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGG
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhh
Confidence 45699999999999998776532 1346899999 666655542 3445678888875 32
Q ss_pred --C--CceEeeehhhhcC-CC-------------hhHHHHHHHHHHHHhc
Q 038208 190 --P--PADAFLFKLVFHG-LG-------------DEDGLKILKKRREAIA 221 (228)
Q Consensus 190 --p--~~D~v~~~~vlh~-~~-------------d~~~~~il~~~~~aL~ 221 (228)
+ .||+|+.+=..-. |. .+.....+..+...|+
T Consensus 297 ~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk 346 (530)
T 3ufb_A 297 MGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLK 346 (530)
T ss_dssp CCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBC
T ss_pred hcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhh
Confidence 1 3999987655421 11 1223456788888887
No 305
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=93.09 E-value=0.38 Score=35.67 Aligned_cols=81 Identities=16% Similarity=0.190 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhccchhHHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCCCeEEEe
Q 038208 103 INQRFNEAMASDSEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETDNLKYIA 182 (228)
Q Consensus 103 ~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~rv~~~~ 182 (228)
+...|-+-|.+..... .+.+. .. -.-..-|+|+|=|+|..=..+.+.+|+.++.++|..-..--..-.+.-.++.
T Consensus 15 RLDsfirRltaQR~~L-~~a~~-~v---~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~il 89 (174)
T 3iht_A 15 RLDLFIDRMVSQRACL-EHAIA-QT---AGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLIL 89 (174)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHH-HT---TTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEE
T ss_pred HHHHHHHHHHHHHHHH-HHHHH-Hh---cCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheec
Confidence 4456666665543322 22222 22 1335789999999999999999999999999999621111011134556778
Q ss_pred CCCCCC
Q 038208 183 GDMFQF 188 (228)
Q Consensus 183 gD~~~~ 188 (228)
||+.+.
T Consensus 90 Gdi~~t 95 (174)
T 3iht_A 90 GDIRET 95 (174)
T ss_dssp SCHHHH
T ss_pred ccHHHH
Confidence 888663
No 306
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.94 E-value=0.15 Score=40.96 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=33.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLP 173 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~ 173 (228)
.....|||..||+|..+.+..+. +.+++++|+ |..++.++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHH
Confidence 45679999999999999998887 578999999 77766543
No 307
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=90.32 E-value=0.21 Score=41.40 Aligned_cols=88 Identities=25% Similarity=0.302 Sum_probs=53.7
Q ss_pred CCCeEEEecCCCcHHHH----HHHHHCCCCeE--EEeechHHHhc------------------CCC--CCC--eEEEeCC
Q 038208 133 GLGSLVDVGGGNGSFSR----IISEAFPGIKC--TVLDLPHVVAN------------------LPE--TDN--LKYIAGD 184 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~----~l~~~~p~~~~--~~~Dlp~~i~~------------------a~~--~~r--v~~~~gD 184 (228)
..-+|+|+|=|+|.... .+.+..|+.++ +-+|- ..+.. ... ..+ +++..||
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek-~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEK-ELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEES-SCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecH-HHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 34689999999998543 23456788764 44542 11110 000 334 4567889
Q ss_pred CCCC---CC--CceEeeehhh-----hcCCChhHHHHHHHHHHHHhccCCC
Q 038208 185 MFQF---VP--PADAFLFKLV-----FHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 185 ~~~~---~p--~~D~v~~~~v-----lh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
..+. ++ .+|++++=-. -.-|+ ..+|+++++.++|||+
T Consensus 175 a~~~l~~l~~~~~Da~flDgFsP~kNPeLWs----~e~f~~l~~~~~pgg~ 221 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDAFSPYKNPELWT----LDFLSLIKERIDEKGY 221 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECCSCTTTSGGGGS----HHHHHHHHTTEEEEEE
T ss_pred HHHHHhhhcccceeEEEeCCCCcccCcccCC----HHHHHHHHHHhCCCcE
Confidence 8662 33 3899876321 11233 4689999999999974
No 308
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=89.59 E-value=0.56 Score=40.11 Aligned_cols=60 Identities=18% Similarity=0.295 Sum_probs=38.8
Q ss_pred CccHHHHHHHHHHhccchhHHHHHHHhhhh-hccCCCeEEEecCCCcHHHHHHHHHC-------CCCeEEEeechH
Q 038208 100 NPGINQRFNEAMASDSEIMTSFVVKAECKQ-IFEGLGSLVDVGGGNGSFSRIISEAF-------PGIKCTVLDLPH 167 (228)
Q Consensus 100 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~-~~~~~~~vlDvGgG~G~~~~~l~~~~-------p~~~~~~~Dlp~ 167 (228)
.|+....|.+.++. +++. .+.. ..+..-.|+++|+|+|.++.-+++.. ..++++++|...
T Consensus 54 apeis~~FGe~la~-------~~~~-~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp 121 (387)
T 1zkd_A 54 SPEISQMFGELLGL-------WSAS-VWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINP 121 (387)
T ss_dssp HHHHCHHHHHHHHH-------HHHH-HHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCH
T ss_pred CCchHHHHHHHHHH-------HHHH-HHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCH
Confidence 46666677666543 2222 2221 12344579999999999999888652 345899999844
No 309
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=89.52 E-value=0.56 Score=40.29 Aligned_cols=54 Identities=9% Similarity=0.018 Sum_probs=39.9
Q ss_pred cCCCeEEEecCCCcHHHHHHH-HHCCC-CeEEEeec-hHHHhcCCC---------C-CCeEEEeCCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIIS-EAFPG-IKCTVLDL-PHVVANLPE---------T-DNLKYIAGDM 185 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~-~~~p~-~~~~~~Dl-p~~i~~a~~---------~-~rv~~~~gD~ 185 (228)
.+..+|+|||++.|.++..++ +..++ .+++.++- |...+..++ . ++|+++..-.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 466899999999999999988 66765 79999997 765554332 2 5666665444
No 310
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=89.50 E-value=1.2 Score=37.72 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=51.0
Q ss_pred CeEEEecCCCcHHHHHHHHHCCCCe-EEEeec-hHHHhcCCC-CCCeEEEeCCCCCC----C-------CCceEeeehhh
Q 038208 135 GSLVDVGGGNGSFSRIISEAFPGIK-CTVLDL-PHVVANLPE-TDNLKYIAGDMFQF----V-------PPADAFLFKLV 200 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~p~~~-~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~~----~-------p~~D~v~~~~v 200 (228)
-+++|+-||.|.++..+.++. .+ +.++|+ +..++..+. .+...++++|+.+- + +.+|+++..--
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 379999999999999999984 55 458898 665554443 45678888998651 2 35899988777
Q ss_pred hcCCC
Q 038208 201 FHGLG 205 (228)
Q Consensus 201 lh~~~ 205 (228)
...|+
T Consensus 81 CQ~fS 85 (376)
T 3g7u_A 81 CQGFS 85 (376)
T ss_dssp CCTTC
T ss_pred CCCcc
Confidence 66665
No 311
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.10 E-value=1.5 Score=40.27 Aligned_cols=86 Identities=13% Similarity=0.117 Sum_probs=68.2
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCC--------CCeEEEeechHHHhcCCC------------------------------
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFP--------GIKCTVLDLPHVVANLPE------------------------------ 174 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p--------~~~~~~~Dlp~~i~~a~~------------------------------ 174 (228)
+...||-+|||.=.....+...+| +++++=+|+|++++.-++
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 467899999999999999988766 677888888988853110
Q ss_pred CCCeEEEeCCCCCC-------------CCC-ceEeeehhhhcCCChhHHHHHHHHHHH
Q 038208 175 TDNLKYIAGDMFQF-------------VPP-ADAFLFKLVFHGLGDEDGLKILKKRRE 218 (228)
Q Consensus 175 ~~rv~~~~gD~~~~-------------~p~-~D~v~~~~vlh~~~d~~~~~il~~~~~ 218 (228)
.++.++++.|+.+. -+. .-++++--+|.+++++++.++|+.+.+
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~ 244 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK 244 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh
Confidence 14899999999862 122 456778889999999999999999874
No 312
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=88.02 E-value=0.46 Score=38.82 Aligned_cols=88 Identities=16% Similarity=0.108 Sum_probs=61.7
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCC----CCCeEEEeCCCCCC----CC---CceEeeehhh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPE----TDNLKYIAGDMFQF----VP---PADAFLFKLV 200 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~----~~rv~~~~gD~~~~----~p---~~D~v~~~~v 200 (228)
+...+||+=+|||.++.+.++ +.-+++.+|+ +..++..++ .++++++..|.++- .| .+|+|++==.
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS 168 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC
T ss_pred cCCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC
Confidence 456789999999999999999 4578999999 777765554 57899999997551 22 3899887543
Q ss_pred hcCCChhHHHHHHHHHHHHh--ccCC
Q 038208 201 FHGLGDEDGLKILKKRREAI--ASNG 224 (228)
Q Consensus 201 lh~~~d~~~~~il~~~~~aL--~pgG 224 (228)
... .++..++++.+.++. .|+|
T Consensus 169 Ye~--k~~~~~vl~~L~~~~~r~~~G 192 (283)
T 2oo3_A 169 YER--KEEYKEIPYAIKNAYSKFSTG 192 (283)
T ss_dssp CCS--TTHHHHHHHHHHHHHHHCTTS
T ss_pred CCC--CcHHHHHHHHHHHhCccCCCe
Confidence 332 124456666666543 4554
No 313
>3mq0_A Transcriptional repressor of the blcabc operon; helix-turn-helix, GAF fold, transcription repressor; 1.79A {Agrobacterium tumefaciens}
Probab=87.65 E-value=0.38 Score=39.05 Aligned_cols=45 Identities=16% Similarity=0.305 Sum_probs=37.5
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhch
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASST 63 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~ 63 (228)
-+.|++.|...+.++|+.| +|+.|+..|++++++ ++.|++++..-
T Consensus 32 al~IL~~l~~~~~~ltl~eia~~lgl~ksTv~RlL~tL~~~G~v~~~~----~~~Y~LG~~~~ 90 (275)
T 3mq0_A 32 AVRILDLVAGSPRDLTAAELTRFLDLPKSSAHGLLAVMTELDLLARSA----DGTLRIGPHSL 90 (275)
T ss_dssp HHHHHHHHHHCSSCEEHHHHHHHHTCC--CHHHHHHHHHHTTSEEECT----TSEEEECTHHH
T ss_pred HHHHHHHHhhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECC----CCcEEehHHHH
Confidence 4568999988766899988 999999999999986 57899998443
No 314
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.81 E-value=1.6 Score=35.96 Aligned_cols=86 Identities=15% Similarity=0.099 Sum_probs=52.7
Q ss_pred CCeEEEecCCC--cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCCCceEeeehhhhcCCChhHH
Q 038208 134 LGSLVDVGGGN--GSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ-FVPPADAFLFKLVFHGLGDEDG 209 (228)
Q Consensus 134 ~~~vlDvGgG~--G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~-~~p~~D~v~~~~vlh~~~d~~~ 209 (228)
..+|.=||+|. +.++..+.+.....+++++|. ++.++.+.+..-+.-...|..+ -..++|+|++.- ++...
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilav-----p~~~~ 107 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS-----PVRTF 107 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECS-----CGGGH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeC-----CHHHH
Confidence 36788899764 234445555543348999998 6666554432222122334433 345689998763 44556
Q ss_pred HHHHHHHHHHhccCC
Q 038208 210 LKILKKRREAIASNG 224 (228)
Q Consensus 210 ~~il~~~~~aL~pgG 224 (228)
..+++++...++||-
T Consensus 108 ~~vl~~l~~~l~~~~ 122 (314)
T 3ggo_A 108 REIAKKLSYILSEDA 122 (314)
T ss_dssp HHHHHHHHHHSCTTC
T ss_pred HHHHHHHhhccCCCc
Confidence 778899998888873
No 315
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.63 E-value=2.1 Score=32.35 Aligned_cols=86 Identities=12% Similarity=0.138 Sum_probs=53.2
Q ss_pred eEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC----CCCceEeeehhhhcCCChhH
Q 038208 136 SLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF----VPPADAFLFKLVFHGLGDED 208 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~----~p~~D~v~~~~vlh~~~d~~ 208 (228)
+||=. ||+|..+..++++. .+.++++++. ++-.+... ++++++.+|+.++ +.++|+++..--......+.
T Consensus 2 kvlVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~ 78 (221)
T 3ew7_A 2 KIGII-GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEK 78 (221)
T ss_dssp EEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTS
T ss_pred eEEEE-cCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcCCccccch
Confidence 34444 45666666655543 2468888887 44443322 6899999999763 33578887554433223334
Q ss_pred HHHHHHHHHHHhccCC
Q 038208 209 GLKILKKRREAIASNG 224 (228)
Q Consensus 209 ~~~il~~~~~aL~pgG 224 (228)
.....+++.++++..|
T Consensus 79 ~~~~~~~l~~a~~~~~ 94 (221)
T 3ew7_A 79 HVTSLDHLISVLNGTV 94 (221)
T ss_dssp HHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHHhcC
Confidence 5667788888887664
No 316
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=86.52 E-value=0.5 Score=29.53 Aligned_cols=41 Identities=10% Similarity=0.226 Sum_probs=32.1
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCC
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLT 59 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t 59 (228)
+..|++.|..++.|+|..| .+..|...|++.... .+.|+++
T Consensus 12 ~~~IL~~L~~~~~~~s~~eLA~~lglsr~tv~~~l~~L~~~G~I~~~~----~G~y~lg 66 (67)
T 2heo_A 12 EQKILQVLSDDGGPVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVSSPS----PKYWSIG 66 (67)
T ss_dssp HHHHHHHHHHHCSCEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEEEE----TTEEEEC
T ss_pred HHHHHHHHHHcCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEecCC----CceEeeC
Confidence 5568888877545888887 889999999998765 5778754
No 317
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=85.36 E-value=0.71 Score=37.14 Aligned_cols=90 Identities=20% Similarity=0.206 Sum_probs=62.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHH-------CCCCeEEEeec----hHH------------------------Hh------
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEA-------FPGIKCTVLDL----PHV------------------------VA------ 170 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~-------~p~~~~~~~Dl----p~~------------------------i~------ 170 (228)
.-+..|+++|+-.|..+..+++. .++-++.++|. |+. +.
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 34679999999999988886652 46789999993 321 00
Q ss_pred -cCCC----CCCeEEEeCCCCCCC-------C--CceEeeehhhhcCCChhHHHHHHHHHHHHhccCCC
Q 038208 171 -NLPE----TDNLKYIAGDMFQFV-------P--PADAFLFKLVFHGLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 171 -~a~~----~~rv~~~~gD~~~~~-------p--~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
..+. .++|+++.|++.+.+ | .+|++++=. ++- +.....|..+...|+|||+
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~---D~Y-~~t~~~le~~~p~l~~GGv 212 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL---DLY-EPTKAVLEAIRPYLTKGSI 212 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC---CCH-HHHHHHHHHHGGGEEEEEE
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC---ccc-chHHHHHHHHHHHhCCCcE
Confidence 0011 378999999997632 3 277777654 221 3346788899999999975
No 318
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=85.01 E-value=1.5 Score=36.65 Aligned_cols=71 Identities=10% Similarity=0.086 Sum_probs=48.7
Q ss_pred CeEEEecCCCcHHHHHHHHHCCCC-eEEEeec-hHHHhcCCC-CCCeEEEeCCCCCC----CC--CceEeeehhhhcCCC
Q 038208 135 GSLVDVGGGNGSFSRIISEAFPGI-KCTVLDL-PHVVANLPE-TDNLKYIAGDMFQF----VP--PADAFLFKLVFHGLG 205 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~p~~-~~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~~----~p--~~D~v~~~~vlh~~~ 205 (228)
.+|+|+-||.|.+...+.++.-+. .+..+|+ +..++..+. .+...++.+|+.+- ++ .+|+++...-...++
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS 82 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT 82 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-----
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchh
Confidence 489999999999999999985333 3788898 666655443 34456788998762 33 589998887766554
No 319
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=84.24 E-value=4.2 Score=28.18 Aligned_cols=82 Identities=15% Similarity=0.218 Sum_probs=46.2
Q ss_pred CeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCCceEeeehhhhcCC
Q 038208 135 GSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-------VPPADAFLFKLVFHGL 204 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-------~p~~D~v~~~~vlh~~ 204 (228)
.+|+=+|+ |..+..+++.. .+.+++++|. ++.++.+++...+.++.+|..++ ..++|+++...
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~----- 77 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT----- 77 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC-----
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee-----
Confidence 46777776 55555554432 2567999998 65555443222566777887541 33588887653
Q ss_pred ChhHHHHHHHHHHHHhccC
Q 038208 205 GDEDGLKILKKRREAIASN 223 (228)
Q Consensus 205 ~d~~~~~il~~~~~aL~pg 223 (228)
+++.....+..+.+.++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~ 96 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYGIN 96 (140)
T ss_dssp SCHHHHHHHHHHHHHTTCC
T ss_pred CCchHHHHHHHHHHHcCCC
Confidence 2233233444455555553
No 320
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=83.81 E-value=3.9 Score=28.77 Aligned_cols=62 Identities=13% Similarity=0.136 Sum_probs=40.5
Q ss_pred CeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCCceEeeehh
Q 038208 135 GSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-------VPPADAFLFKL 199 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-------~p~~D~v~~~~ 199 (228)
.+++=+|+| .++..+++.. -+.+++++|. ++.++.+++ ..+.++.+|..++ ..++|+++...
T Consensus 7 ~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~ 78 (141)
T 3llv_A 7 YEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLITG 78 (141)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence 468888874 4555555433 2568999998 666655543 4578889998763 23578877543
No 321
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=81.12 E-value=1.9 Score=37.34 Aligned_cols=57 Identities=19% Similarity=0.377 Sum_probs=38.7
Q ss_pred cCccHHHHHHHHHHhccchhHHHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCC-----CCeEEEeec
Q 038208 99 QNPGINQRFNEAMASDSEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFP-----GIKCTVLDL 165 (228)
Q Consensus 99 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p-----~~~~~~~Dl 165 (228)
..|+....|.+.++.+ +++ .+. ..+..+|+|+|+|+|.++..+++... ..++++++.
T Consensus 113 TAPeiS~~FGe~la~~-------~~~-~~~--~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~ 174 (432)
T 4f3n_A 113 TAPELSPLFAQTLARP-------VAQ-ALD--ASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDL 174 (432)
T ss_dssp SCGGGHHHHHHHHHHH-------HHH-HHH--HHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECT
T ss_pred CchhhhHHHHHHHHHH-------HHH-HHH--hcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEc
Confidence 4678888887765432 233 222 12356999999999999998876432 237889987
No 322
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=81.04 E-value=1.5 Score=35.84 Aligned_cols=51 Identities=20% Similarity=0.292 Sum_probs=37.8
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCC----CeEEEeechHHHhcCCCCCCeEEEeC
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPG----IKCTVLDLPHVVANLPETDNLKYIAG 183 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~----~~~~~~Dlp~~i~~a~~~~rv~~~~g 183 (228)
++..|+=||||.|.++..+.+.+|+ ++.+++|-..-........+|+.+..
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~l~~~~NV~li~~ 114 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTR 114 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEEC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhhhcCCCcEEEEec
Confidence 4579999999999999999998886 59999996221222233567777765
No 323
>3r4k_A Transcriptional regulator, ICLR family; DNA/RNA-binding 3-helical bundle, profilin-like, structural joint center for structural genomics, JCSG; 2.46A {Ruegeria SP}
Probab=80.95 E-value=0.68 Score=37.10 Aligned_cols=44 Identities=23% Similarity=0.310 Sum_probs=35.2
Q ss_pred cChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhc
Q 038208 16 LSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASS 62 (228)
Q Consensus 16 lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~ 62 (228)
+.|++.|...++++|+.| +|+.|+..|++++++. .+.|++++..
T Consensus 9 l~IL~~l~~~~~~lsl~eia~~lgl~ksT~~RlL~tL~~~G~v~~~~~---~~~Y~lG~~~ 66 (260)
T 3r4k_A 9 LTLLTYFNHGRLEIGLSDLTRLSGMNKATVYRLMSELQEAGFVEQVEG---ARSYRLGPQV 66 (260)
T ss_dssp HHHHTTCBTTBSEEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEECSS---SSEEEECTTH
T ss_pred HHHHHHHhhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEcCC---CCcEEcCHHH
Confidence 457888876546889888 9999999999999862 3899999744
No 324
>2xrn_A HTH-type transcriptional regulator TTGV; DNA-binding protein, tetramer gene regulator, cooperative DN binding, multidrug binding protein; 2.90A {Pseudomonas putida} PDB: 2xro_A
Probab=79.37 E-value=1.3 Score=35.00 Aligned_cols=47 Identities=15% Similarity=0.170 Sum_probs=35.8
Q ss_pred cChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhchhh
Q 038208 16 LSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLL 65 (228)
Q Consensus 16 lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l 65 (228)
+.|++.|...++++|+.| +|+.|+..|++++.+. ++.|++++....|
T Consensus 9 l~iL~~l~~~~~~~s~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~~---~~~Y~lg~~~~~l 69 (241)
T 2xrn_A 9 ASIMRALGSHPHGLSLAAIAQLVGLPRSTVQRIINALEEEFLVEALGP---AGGFRLGPALGQL 69 (241)
T ss_dssp HHHHHHHHTCTTCEEHHHHHHHTTSCHHHHHHHHHHHHTTTSEEECGG---GCEEEECSHHHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC---CCeEEECHHHHHH
Confidence 456778876545788888 8999999999999752 4789999855433
No 325
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=79.29 E-value=1.8 Score=34.31 Aligned_cols=44 Identities=23% Similarity=0.276 Sum_probs=34.9
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhc
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASS 62 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~ 62 (228)
-+.|++.|...++++|+.| +|+.|+..|++++.. ++.|++++..
T Consensus 10 ~l~iL~~l~~~~~~~~~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~----~~~Y~lg~~~ 67 (249)
T 1mkm_A 10 AFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKK----DKRYVPGYKL 67 (249)
T ss_dssp HHHHHHHHHHCSSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECT----TSCEEECTHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEECC----CCcEEECHHH
Confidence 3457788876545789888 899999999999974 6899998743
No 326
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=78.79 E-value=2.1 Score=28.39 Aligned_cols=47 Identities=13% Similarity=0.265 Sum_probs=36.6
Q ss_pred HHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhch
Q 038208 9 SLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASST 63 (228)
Q Consensus 9 ~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~ 63 (228)
+|..-.++.|++.| . ++++..| .|+.|...|++++.. +.|.+++.+.
T Consensus 27 ~l~~~~r~~Il~~L-~--~~~~~~eLa~~l~is~~tv~~~L~~L~~~Glv~~~~-----g~y~l~~~g~ 87 (96)
T 1y0u_A 27 AVTNPVRRKILRML-D--KGRSEEEIMQTLSLSKKQLDYHLKVLEAGFCIERVG-----ERWVVTDAGK 87 (96)
T ss_dssp HHSCHHHHHHHHHH-H--TTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-----TEEEECTTTC
T ss_pred HhCCHHHHHHHHHH-c--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEC-----CEEEECCCch
Confidence 34444577899999 5 6888887 789999999999874 5898887654
No 327
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=78.65 E-value=2.3 Score=35.28 Aligned_cols=68 Identities=15% Similarity=0.159 Sum_probs=46.8
Q ss_pred CCeEEEecCCCcHHHHHHHHHCCCCe-EEEeec-hHHHhcCCC-CCCeEEEeCCCCC----CCCCceEeeehhhhcCCC
Q 038208 134 LGSLVDVGGGNGSFSRIISEAFPGIK-CTVLDL-PHVVANLPE-TDNLKYIAGDMFQ----FVPPADAFLFKLVFHGLG 205 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~p~~~-~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~----~~p~~D~v~~~~vlh~~~ 205 (228)
..+++|+-||.|.+...+.++ +.+ +..+|+ +..++..+. .+... .+|+.+ .+|.+|+++...-...|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS 85 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFS 85 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcc
Confidence 468999999999999999987 455 566888 655544332 11111 678765 256789998887666664
No 328
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=78.47 E-value=2.5 Score=29.29 Aligned_cols=49 Identities=16% Similarity=0.200 Sum_probs=35.9
Q ss_pred HcChhhHhhhCCCCcCHHH----------------HHHHHHhCCceeecccCCCCCeEeCChhchhhhhC
Q 038208 15 ELSIADIIHCHGRAITLSE----------------LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLIKE 68 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e----------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~~~ 68 (228)
+..|++.|..+ +++|+.+ -|+.|...|+++... .+.|++|+.+..+...
T Consensus 15 d~~IL~~L~~~-g~~s~~eLA~~l~~giS~~aVs~rL~~Le~~GLV~~~~----rg~Y~LT~~G~~~l~~ 79 (111)
T 3b73_A 15 DDRILEIIHEE-GNGSPKELEDRDEIRISKSSVSRRLKKLADHDLLQPLA----NGVYVITEEGEAYLNG 79 (111)
T ss_dssp HHHHHHHHHHH-SCBCHHHHHTSTTCCSCHHHHHHHHHHHHHTTSEEECS----TTCEEECHHHHHHHTT
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEecC----CceEEECchHHHHHHH
Confidence 44566677654 3666655 688999999999875 5689999999855543
No 329
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=76.56 E-value=15 Score=28.18 Aligned_cols=81 Identities=15% Similarity=0.080 Sum_probs=49.9
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCC--CeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCCceEeeehhhhc
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPG--IKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-------VPPADAFLFKLVFH 202 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~--~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-------~p~~D~v~~~~vlh 202 (228)
...+++=+|+ |..+..+++..-. . ++++|. ++.++.++ ..+.++.+|..++ +.++|++++..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~--- 79 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDL--- 79 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECC---
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC---
Confidence 3457888777 6888888877643 4 888887 66665554 5688999998752 23588877642
Q ss_pred CCChhHHHHHHHHHHHHhccC
Q 038208 203 GLGDEDGLKILKKRREAIASN 223 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pg 223 (228)
-+|+.+ .......+.+.|+
T Consensus 80 -~~d~~n-~~~~~~a~~~~~~ 98 (234)
T 2aef_A 80 -ESDSET-IHCILGIRKIDES 98 (234)
T ss_dssp -SCHHHH-HHHHHHHHHHCSS
T ss_pred -CCcHHH-HHHHHHHHHHCCC
Confidence 123333 3333444445553
No 330
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=75.47 E-value=5.6 Score=31.82 Aligned_cols=84 Identities=14% Similarity=0.123 Sum_probs=47.4
Q ss_pred CeEEEecCCC--cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCCCceEeeehhhhcCCChhHHHH
Q 038208 135 GSLVDVGGGN--GSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQFVPPADAFLFKLVFHGLGDEDGLK 211 (228)
Q Consensus 135 ~~vlDvGgG~--G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~~p~~D~v~~~~vlh~~~d~~~~~ 211 (228)
.+|.=||+|. +.++..+.+..+..+++++|. ++.++.+.+.........|..+...++|+|++.- ++.....
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilav-----p~~~~~~ 81 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAV-----PIKKTID 81 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECS-----CHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcC-----CHHHHHH
Confidence 4688888775 234455555555678999998 5555443221111112233322234578887753 4444466
Q ss_pred HHHHHHHH-hccC
Q 038208 212 ILKKRREA-IASN 223 (228)
Q Consensus 212 il~~~~~a-L~pg 223 (228)
+++++... ++|+
T Consensus 82 v~~~l~~~~l~~~ 94 (290)
T 3b1f_A 82 FIKILADLDLKED 94 (290)
T ss_dssp HHHHHHTSCCCTT
T ss_pred HHHHHHhcCCCCC
Confidence 77777666 6665
No 331
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=75.17 E-value=12 Score=28.23 Aligned_cols=86 Identities=12% Similarity=0.091 Sum_probs=53.2
Q ss_pred EEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC----CCCceEeeehhhhc--CCChh
Q 038208 137 LVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF----VPPADAFLFKLVFH--GLGDE 207 (228)
Q Consensus 137 vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~----~p~~D~v~~~~vlh--~~~d~ 207 (228)
||=. ||+|..+..++++. .+.++++++. +.-..... ..+++++.+|+.++ +.++|+++..--.. ....+
T Consensus 3 ilVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 3 IAVL-GATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp EEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred EEEE-cCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 4434 45676666666543 2568888887 44433222 36899999999763 34578876544332 11234
Q ss_pred HHHHHHHHHHHHhccCC
Q 038208 208 DGLKILKKRREAIASNG 224 (228)
Q Consensus 208 ~~~~il~~~~~aL~pgG 224 (228)
......+++.++++..|
T Consensus 81 ~n~~~~~~l~~a~~~~~ 97 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSD 97 (224)
T ss_dssp HHHHHHHHHHHTCTTCC
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 45667788888887765
No 332
>2g7u_A Transcriptional regulator; ICLR family, structural genomics, PSI, protein structure initiative, midwest center for struc genomics; 2.30A {Rhodococcus SP}
Probab=74.99 E-value=2.4 Score=33.68 Aligned_cols=47 Identities=15% Similarity=0.152 Sum_probs=36.6
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~ 66 (228)
-+.|++.|...++++|+.| +|+.|+..|+++++ ++.|++++....|.
T Consensus 16 ~l~iL~~l~~~~~~~~~~eia~~~gl~~stv~r~l~~L~~~G~v~~~-----~~~Y~Lg~~~~~l~ 76 (257)
T 2g7u_A 16 GFAVLLAFDAQRPNPTLAELATEAGLSRPAVRRILLTLQKLGYVAGS-----GGRWSLTPRVLSIG 76 (257)
T ss_dssp HHHHHHTCSSSCSSCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE-----TTEEEECGGGHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeC-----CCEEEEcHHHHHHH
Confidence 3457788875446889888 89999999999997 48999998654443
No 333
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=74.87 E-value=2 Score=34.30 Aligned_cols=43 Identities=12% Similarity=0.294 Sum_probs=33.8
Q ss_pred cChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhc
Q 038208 16 LSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASS 62 (228)
Q Consensus 16 lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~ 62 (228)
+.|++.|...++++|+.| +|+.|+..|++++.. ++.|.+++..
T Consensus 26 l~iL~~l~~~~~~~~~~eia~~~gl~kstv~r~l~tL~~~G~v~~~~----~~~Y~lg~~~ 82 (260)
T 2o0y_A 26 IDLLELFDAAHPTRSLKELVEGTKLPKTTVVRLVATMCARSVLTSRA----DGSYSLGPEM 82 (260)
T ss_dssp HHHHTTCBTTBSSBCHHHHHHHHCCCHHHHHHHHHHHHHTTSEEECT----TSCEEECHHH
T ss_pred HHHHHHHhhCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECC----CCeEEecHHH
Confidence 456777765436899988 899999999999986 3489998743
No 334
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=74.07 E-value=3.6 Score=33.92 Aligned_cols=40 Identities=23% Similarity=0.296 Sum_probs=33.0
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-PHVVANLP 173 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~ 173 (228)
.....|||-=||+|..+.+..+. +.+++++|+ |..++.++
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~ 291 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASA 291 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHH
Confidence 45679999999999999998887 678999999 66665543
No 335
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=72.55 E-value=13 Score=29.39 Aligned_cols=82 Identities=12% Similarity=0.007 Sum_probs=50.2
Q ss_pred CCCcHHHHHHHHHC---CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC------CCCceEeeehhhhcCCChhHHHH
Q 038208 142 GGNGSFSRIISEAF---PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF------VPPADAFLFKLVFHGLGDEDGLK 211 (228)
Q Consensus 142 gG~G~~~~~l~~~~---p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~------~p~~D~v~~~~vlh~~~d~~~~~ 211 (228)
||+|..+..++++. ++.++++++. ++-.... ...+++++.+|+.++ +.++|+++..-... .+......
T Consensus 7 GatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~-~~~~~~~~ 84 (289)
T 3e48_A 7 GATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSII-HPSFKRIP 84 (289)
T ss_dssp TTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCC-CSHHHHHH
T ss_pred cCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCC-ccchhhHH
Confidence 56677666666543 4677888887 4322211 146899999999773 33578887544322 22233455
Q ss_pred HHHHHHHHhccCCC
Q 038208 212 ILKKRREAIASNGE 225 (228)
Q Consensus 212 il~~~~~aL~pgG~ 225 (228)
..+++.++++..|+
T Consensus 85 ~~~~l~~aa~~~gv 98 (289)
T 3e48_A 85 EVENLVYAAKQSGV 98 (289)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 66777887776654
No 336
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=71.81 E-value=7.9 Score=33.15 Aligned_cols=82 Identities=20% Similarity=0.293 Sum_probs=49.4
Q ss_pred CCeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCCceEeeehhhhcC
Q 038208 134 LGSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-------VPPADAFLFKLVFHG 203 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-------~p~~D~v~~~~vlh~ 203 (228)
..+|+=+|+| .++..+++.. -+..++++|. |+.++.++. ..+.++.||..++ +..+|++++..
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~---- 76 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAI---- 76 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECC----
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECC----
Confidence 3467777765 4444444432 3678999998 787776653 4577899999773 23488776543
Q ss_pred CChhHHHHHHHHHHHHhccC
Q 038208 204 LGDEDGLKILKKRREAIASN 223 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pg 223 (228)
-+++.+..+.. ..+.+.|+
T Consensus 77 ~~~~~n~~i~~-~ar~~~p~ 95 (413)
T 3l9w_A 77 DDPQTNLQLTE-MVKEHFPH 95 (413)
T ss_dssp SSHHHHHHHHH-HHHHHCTT
T ss_pred CChHHHHHHHH-HHHHhCCC
Confidence 13444444444 44445554
No 337
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=71.37 E-value=3.7 Score=34.06 Aligned_cols=70 Identities=6% Similarity=0.074 Sum_probs=48.1
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeE--EEeec-hHHHhcCCC--CCCeEEEeCCCCC-C---CC--CceEeeehhhh
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKC--TVLDL-PHVVANLPE--TDNLKYIAGDMFQ-F---VP--PADAFLFKLVF 201 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~--~~~Dl-p~~i~~a~~--~~rv~~~~gD~~~-~---~p--~~D~v~~~~vl 201 (228)
+.-+++|+-||.|.+...+.+..-+.++ ..+|+ +..++..+. ... ++.+|+.+ . ++ .+|+++.....
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~--~~~~DI~~~~~~~i~~~~~Dil~ggpPC 86 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE--VQVKNLDSISIKQIESLNCNTWFMSPPC 86 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC--CBCCCTTTCCHHHHHHTCCCEEEECCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC--cccCChhhcCHHHhccCCCCEEEecCCc
Confidence 4568999999999999999987432344 58998 555543332 122 56788866 1 34 48999877666
Q ss_pred cCC
Q 038208 202 HGL 204 (228)
Q Consensus 202 h~~ 204 (228)
..|
T Consensus 87 Q~f 89 (327)
T 3qv2_A 87 QPY 89 (327)
T ss_dssp TTC
T ss_pred cCc
Confidence 666
No 338
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=70.35 E-value=2.5 Score=27.02 Aligned_cols=34 Identities=9% Similarity=0.319 Sum_probs=25.6
Q ss_pred HcChhhHhhhCC-CCcCHHH-------------------HHHHHHhCCceeecc
Q 038208 15 ELSIADIIHCHG-RAITLSE-------------------LMRLLVHSGCFNKTK 48 (228)
Q Consensus 15 ~lglfd~L~~~~-~p~t~~e-------------------ll~~L~~~g~l~~~~ 48 (228)
+..|++.|...+ +++|++| .|+.|+..|++.+..
T Consensus 19 r~~IL~~l~~~~~~~~s~~el~~~l~~~~~~is~~TVyR~L~~L~~~Glv~~~~ 72 (83)
T 2fu4_A 19 RLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHN 72 (83)
T ss_dssp HHHHHHHHTSGGGSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCeEEEe
Confidence 455777777643 5777777 788999999998764
No 339
>2ia2_A Putative transcriptional regulator; SAD, PSI-2, structural genomics, structure initiative, midwest center for structural genomic transcription; 2.10A {Rhodococcus SP}
Probab=70.11 E-value=2.5 Score=33.80 Aligned_cols=43 Identities=23% Similarity=0.294 Sum_probs=34.3
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhc
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASS 62 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~ 62 (228)
-+.|++.|...++++|+.| +|+.|+..|+++++ ++.|++++..
T Consensus 23 ~l~iL~~l~~~~~~~~~~eia~~~gl~~stv~r~l~tL~~~G~v~~~-----~~~Y~Lg~~~ 79 (265)
T 2ia2_A 23 GLAVIRCFDHRNQRRTLSDVARATDLTRATARRFLLTLVELGYVATD-----GSAFWLTPRV 79 (265)
T ss_dssp HHHHHHTCCSSCSSEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEES-----SSEEEECGGG
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEec-----CCEEEEcHHH
Confidence 3457788875446889888 89999999999997 4899998744
No 340
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=70.05 E-value=11 Score=29.84 Aligned_cols=84 Identities=14% Similarity=0.120 Sum_probs=46.4
Q ss_pred eEEEecCCC-cH-HHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCC-CceEeeehhhhcCCChhHHHH
Q 038208 136 SLVDVGGGN-GS-FSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQFVP-PADAFLFKLVFHGLGDEDGLK 211 (228)
Q Consensus 136 ~vlDvGgG~-G~-~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~~p-~~D~v~~~~vlh~~~d~~~~~ 211 (228)
+|.=||+|. |. ++..+.+.....+++++|. ++.++.+++..-......|..+... ++|+|++. .++.....
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVila-----vp~~~~~~ 77 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-----SPVRTFRE 77 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC-----SCHHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEc-----CCHHHHHH
Confidence 567788664 33 2333333322337899998 5555544321111111233333345 68888775 34455667
Q ss_pred HHHHHHHHhccCC
Q 038208 212 ILKKRREAIASNG 224 (228)
Q Consensus 212 il~~~~~aL~pgG 224 (228)
+++++...++|+.
T Consensus 78 v~~~l~~~l~~~~ 90 (281)
T 2g5c_A 78 IAKKLSYILSEDA 90 (281)
T ss_dssp HHHHHHHHSCTTC
T ss_pred HHHHHHhhCCCCc
Confidence 8888888888764
No 341
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=69.56 E-value=4.7 Score=28.49 Aligned_cols=83 Identities=18% Similarity=0.176 Sum_probs=48.5
Q ss_pred CCeEEEecCCC-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCCceEeeehhhhcCC
Q 038208 134 LGSLVDVGGGN-GSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-------VPPADAFLFKLVFHGL 204 (228)
Q Consensus 134 ~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-------~p~~D~v~~~~vlh~~ 204 (228)
..+|+=+|+|. |......+++ -+.+++++|. ++.++.+++ ..+.++.+|..++ ...+|++++.. -
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~----~ 80 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTI----P 80 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECC----S
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEEC----C
Confidence 35788888754 3333333333 3568999998 777766553 5678899998763 12478776542 2
Q ss_pred ChhHHHHHHHHHHHHhccC
Q 038208 205 GDEDGLKILKKRREAIASN 223 (228)
Q Consensus 205 ~d~~~~~il~~~~~aL~pg 223 (228)
+++.+..+.. ..+.+.|+
T Consensus 81 ~~~~n~~~~~-~a~~~~~~ 98 (140)
T 3fwz_A 81 NGYEAGEIVA-SARAKNPD 98 (140)
T ss_dssp CHHHHHHHHH-HHHHHCSS
T ss_pred ChHHHHHHHH-HHHHHCCC
Confidence 2344444444 33444444
No 342
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=69.01 E-value=4.6 Score=33.86 Aligned_cols=32 Identities=34% Similarity=0.474 Sum_probs=26.8
Q ss_pred CCeEEEecCCCcHHHHH--HHHHCCCCeEEEeec
Q 038208 134 LGSLVDVGGGNGSFSRI--ISEAFPGIKCTVLDL 165 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~--l~~~~p~~~~~~~Dl 165 (228)
.++||=||+|.+.+..+ |++..++.+++++|-
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~ 35 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEP 35 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeC
Confidence 46899999999986654 778889999999984
No 343
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=68.41 E-value=22 Score=25.30 Aligned_cols=65 Identities=22% Similarity=0.200 Sum_probs=39.6
Q ss_pred CCCeEEEecCCC-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCCceEeeeh
Q 038208 133 GLGSLVDVGGGN-GSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-------VPPADAFLFK 198 (228)
Q Consensus 133 ~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-------~p~~D~v~~~ 198 (228)
...+|+=+|+|. |......+++. +.+++++|. ++.++.++....+..+.+|...+ ..++|+++..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 456888888754 33333333333 468999998 67676665223456677776431 2247887765
No 344
>1u2w_A CADC repressor, cadmium efflux system accessory protein; LEAD, SOFT metal ION resistance, ARSR/SM family, DNA binding protein; 1.90A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 3f72_A
Probab=68.25 E-value=4.9 Score=27.91 Aligned_cols=53 Identities=17% Similarity=0.206 Sum_probs=36.4
Q ss_pred HHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChh
Q 038208 7 SMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTAS 61 (228)
Q Consensus 7 ~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~ 61 (228)
..+|.--.++.|+..|... +++|+.| .|+.|...|++..... ++...|++++.
T Consensus 36 ~~al~~~~rl~IL~~L~~~-~~~s~~eLa~~l~is~stvs~~L~~L~~~Glv~~~~~-gr~~~y~l~~~ 102 (122)
T 1u2w_A 36 LKAIADENRAKITYALCQD-EELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKE-GKLALYSLGDE 102 (122)
T ss_dssp HHHHHSHHHHHHHHHHHHS-SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC-----CCEEEESCH
T ss_pred HHHhCCHHHHHHHHHHHHC-CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEE-CCEEEEEECHH
Confidence 3445455678899999854 5888887 7899999999987651 11225877764
No 345
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=68.24 E-value=5.8 Score=26.33 Aligned_cols=51 Identities=18% Similarity=0.231 Sum_probs=36.9
Q ss_pred HHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChh
Q 038208 8 MSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTAS 61 (228)
Q Consensus 8 ~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~ 61 (228)
.+|.--.++.|+..|.. +|.++.| -|+.|...|+++.... ++...|++++.
T Consensus 18 ~~l~~~~r~~Il~~L~~--~~~~~~ela~~l~is~~tvs~~L~~L~~~Glv~~~~~-g~~~~y~l~~~ 82 (102)
T 3pqk_A 18 KTLSHPVRLMLVCTLVE--GEFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRN-IKQIFYRLTEA 82 (102)
T ss_dssp HHHCSHHHHHHHHHHHT--CCBCHHHHHHHHTCCTTHHHHHHHHHHHTTSEEEECS-SSCCEEEECSS
T ss_pred HHcCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEe-CCEEEEEECcH
Confidence 44445568889999976 6899888 6899999999987652 12335777763
No 346
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=68.19 E-value=3.5 Score=27.87 Aligned_cols=51 Identities=20% Similarity=0.195 Sum_probs=35.1
Q ss_pred HHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhc
Q 038208 9 SLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASS 62 (228)
Q Consensus 9 ~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~ 62 (228)
+|..-.++.|+..|.. +|+|..| .|+.|...|+++.... ++...|.+++.+
T Consensus 17 ~l~~~~r~~IL~~L~~--~~~~~~ela~~l~is~~tv~~~l~~L~~~gli~~~~~-gr~~~y~l~~~~ 81 (114)
T 2oqg_A 17 ALSDETRWEILTELGR--ADQSASSLATRLPVSRQAIAKHLNALQACGLVESVKV-GREIRYRALGAE 81 (114)
T ss_dssp HTTCHHHHHHHHHHHH--SCBCHHHHHHHSSSCHHHHHHHHHHHHHTTSEEEEEE-TTEEEEEECSHH
T ss_pred HhCChHHHHHHHHHHc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeEEec-CCEEEEEechHH
Confidence 3333467789999954 6888887 8899999999987651 111237777654
No 347
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=67.59 E-value=19 Score=28.18 Aligned_cols=79 Identities=15% Similarity=0.147 Sum_probs=48.4
Q ss_pred CeEEEecCCCcHHHHHHHHHCC--CCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-CCCCceEeeehhhhcCCChhHHH
Q 038208 135 GSLVDVGGGNGSFSRIISEAFP--GIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ-FVPPADAFLFKLVFHGLGDEDGL 210 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~p--~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~-~~p~~D~v~~~~vlh~~~d~~~~ 210 (228)
.+||=.| + |..+..++++.- +.++++++. +.-.+... ..+++++.+|+.+ .+.++|+|+..-......+....
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~~~~~~ 82 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPVLA 82 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCCCCTTCCEEEECCCCBTTBCHHHH
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEecccccccCCCCEEEECCCccccccHHHH
Confidence 4788888 4 888888877652 457888887 33222111 3679999999876 34468888755544433333333
Q ss_pred HHHHHH
Q 038208 211 KILKKR 216 (228)
Q Consensus 211 ~il~~~ 216 (228)
.+++.+
T Consensus 83 ~l~~a~ 88 (286)
T 3ius_A 83 ALGDQI 88 (286)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 344333
No 348
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=65.94 E-value=3.9 Score=34.00 Aligned_cols=71 Identities=10% Similarity=0.113 Sum_probs=48.6
Q ss_pred CeEEEecCCCcHHHHHHHHHCCCCe-EEEeec-hHHHhcCCC-CCCeEEEeCCCCC----CCC--CceEeeehhhhcCCC
Q 038208 135 GSLVDVGGGNGSFSRIISEAFPGIK-CTVLDL-PHVVANLPE-TDNLKYIAGDMFQ----FVP--PADAFLFKLVFHGLG 205 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~p~~~-~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~----~~p--~~D~v~~~~vlh~~~ 205 (228)
-+++|+-||.|.+...+.++.-+.+ +..+|+ +..++..+. .+...++.+|+.+ .++ .+|+++.......++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 3799999999999999998854334 567898 555543332 3345567888865 133 489988776655553
No 349
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=65.41 E-value=9.8 Score=28.95 Aligned_cols=61 Identities=11% Similarity=0.216 Sum_probs=39.9
Q ss_pred eEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCCceEeeeh
Q 038208 136 SLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-------VPPADAFLFK 198 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-------~p~~D~v~~~ 198 (228)
+|+=+|+ |.++..+++.. .+.+++++|. ++.++...+...+.++.+|..++ ...+|++++.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 3555664 66766666643 3568999998 66665543334678899998762 2358888754
No 350
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=65.19 E-value=11 Score=31.06 Aligned_cols=40 Identities=18% Similarity=0.236 Sum_probs=33.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec-h---HHHhcCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL-P---HVVANLP 173 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-p---~~i~~a~ 173 (228)
.....|||-=||+|..+.+..+. +.+++++|+ | ..++.++
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~ 284 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQL 284 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHH
T ss_pred CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHH
Confidence 45689999999999999999988 678999999 6 6666544
No 351
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=64.95 E-value=9.4 Score=27.38 Aligned_cols=45 Identities=11% Similarity=0.146 Sum_probs=31.0
Q ss_pred HHcChhhHhhhCCCCcCHHH-------------------HHHHHHhCCceeecccCCCCCeEeC
Q 038208 14 IELSIADIIHCHGRAITLSE-------------------LMRLLVHSGCFNKTKVNGQEEAYGL 58 (228)
Q Consensus 14 ~~lglfd~L~~~~~p~t~~e-------------------ll~~L~~~g~l~~~~~~~~~~~~~~ 58 (228)
.+.-|++.|...+++.|++| .|+.|+..|++.+....++...|..
T Consensus 23 qR~~Il~~L~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y~~ 86 (145)
T 2fe3_A 23 QRHAILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVKELTYGDASSRFDF 86 (145)
T ss_dssp HHHHHHHHHHHCSSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEEECCTTSCCEEEE
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCChhhHHHHHHHHHHCCCEEEEeeCCCceEEEC
Confidence 34557888876556788887 7899999999988753222334654
No 352
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=64.87 E-value=17 Score=27.33 Aligned_cols=86 Identities=16% Similarity=0.230 Sum_probs=49.4
Q ss_pred CeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC------CCCceEeeehhhhcCCC
Q 038208 135 GSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF------VPPADAFLFKLVFHGLG 205 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~------~p~~D~v~~~~vlh~~~ 205 (228)
.+||=. ||+|..+..+++.. .+.++++++. +.-.+.. ..+++++.+|+.++ +.++|+++..--.. +.
T Consensus 5 ~~ilIt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~-~~ 80 (227)
T 3dhn_A 5 KKIVLI-GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG-WN 80 (227)
T ss_dssp CEEEEE-TCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred CEEEEE-cCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC-CC
Confidence 355544 56677777666654 2468899988 4332222 37899999999762 23578876543221 22
Q ss_pred hh----HHHHHHHHHHHHhccCC
Q 038208 206 DE----DGLKILKKRREAIASNG 224 (228)
Q Consensus 206 d~----~~~~il~~~~~aL~pgG 224 (228)
++ ......+++.++++..|
T Consensus 81 ~~~~~~~n~~~~~~l~~~~~~~~ 103 (227)
T 3dhn_A 81 NPDIYDETIKVYLTIIDGVKKAG 103 (227)
T ss_dssp ---CCSHHHHHHHHHHHHHHHTT
T ss_pred ChhHHHHHHHHHHHHHHHHHHhC
Confidence 21 13455666666666554
No 353
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=64.68 E-value=4.7 Score=26.56 Aligned_cols=51 Identities=20% Similarity=0.288 Sum_probs=36.8
Q ss_pred HHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChh
Q 038208 8 MSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTAS 61 (228)
Q Consensus 8 ~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~ 61 (228)
.+|.--.++.|+..|.. ++.|+.| -|+.|...|+++.... ++...|++++.
T Consensus 18 ~~l~~~~r~~Il~~L~~--~~~~~~ela~~l~is~~tvs~~L~~L~~~Glv~~~~~-g~~~~y~l~~~ 82 (98)
T 3jth_A 18 KAMANERRLQILCMLHN--QELSVGELCAKLQLSQSALSQHLAWLRRDGLVTTRKE-AQTVYYTLKSE 82 (98)
T ss_dssp HHHCSHHHHHHHHHTTT--SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECC-TTCCEEEECCH
T ss_pred HHcCCHHHHHHHHHHhc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEe-CCEEEEEECHH
Confidence 34444567889999987 6888887 7899999999987752 12334777763
No 354
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=64.19 E-value=8.5 Score=27.44 Aligned_cols=47 Identities=11% Similarity=0.122 Sum_probs=31.6
Q ss_pred HHHHcChhhHhhhCCCCcCHHH-------------------HHHHHHhCCceeecccCCCCCeEeC
Q 038208 12 CAIELSIADIIHCHGRAITLSE-------------------LMRLLVHSGCFNKTKVNGQEEAYGL 58 (228)
Q Consensus 12 ~a~~lglfd~L~~~~~p~t~~e-------------------ll~~L~~~g~l~~~~~~~~~~~~~~ 58 (228)
+..+.-|++.|...++++|++| .|+.|+..|++.+....++...|..
T Consensus 13 T~qR~~Il~~L~~~~~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~g~~~Y~~ 78 (139)
T 3mwm_A 13 TRQRAAVSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEVDVLRTAEGESVYRR 78 (139)
T ss_dssp HHHHHHHHHHHTTCSSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSSEEEECTTSCEEEEC
T ss_pred CHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCCEEEEEcCCCceEEEE
Confidence 3455667777776556777777 7889999999988653222335654
No 355
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=63.49 E-value=5.9 Score=25.83 Aligned_cols=53 Identities=11% Similarity=0.172 Sum_probs=37.2
Q ss_pred HHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhc
Q 038208 8 MSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASS 62 (228)
Q Consensus 8 ~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~ 62 (228)
.+|..-.++.|+..|... +++|..| .|+.|...|++++... ++...|.+++..
T Consensus 19 ~~l~~~~~~~il~~l~~~-~~~s~~ela~~l~is~~tvs~~l~~L~~~glv~~~~~-~r~~~y~l~~~~ 85 (99)
T 3cuo_A 19 KAMSHPKRLLILCMLSGS-PGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRD-AQRILYSIKNEA 85 (99)
T ss_dssp HHHCSHHHHHHHHHHTTC-CSEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEEC-SSCEEEEECCHH
T ss_pred HHhCChHHHHHHHHHHhC-CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEec-CCEEEEEEChHH
Confidence 344445678889999764 5888877 7899999999988752 122347777644
No 356
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=63.44 E-value=8.9 Score=26.96 Aligned_cols=46 Identities=13% Similarity=0.209 Sum_probs=30.9
Q ss_pred HHHHcChhhHhhhCCCCcCHHH-------------------HHHHHHhCCceeecccCCCCCeEe
Q 038208 12 CAIELSIADIIHCHGRAITLSE-------------------LMRLLVHSGCFNKTKVNGQEEAYG 57 (228)
Q Consensus 12 ~a~~lglfd~L~~~~~p~t~~e-------------------ll~~L~~~g~l~~~~~~~~~~~~~ 57 (228)
+--+.-|++.|...+++.|++| .|+.|+..|++.+....++...|.
T Consensus 10 T~qR~~Il~~l~~~~~~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv~~~~~~~~~~~y~ 74 (131)
T 2o03_A 10 TRQRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDTLHTDTGESVYR 74 (131)
T ss_dssp HHHHHHHHHHHHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTTSEEEEECTTSCEEEE
T ss_pred CHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCEEEEEeCCCceEEE
Confidence 4456667777776556777777 789999999998875322233454
No 357
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=63.26 E-value=29 Score=22.77 Aligned_cols=62 Identities=19% Similarity=0.125 Sum_probs=38.9
Q ss_pred CeEEEecCCCcHHHHHHHH---HCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC------CCCceEeeehh
Q 038208 135 GSLVDVGGGNGSFSRIISE---AFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF------VPPADAFLFKL 199 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~---~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~------~p~~D~v~~~~ 199 (228)
.+|+=+|+ |..+..+++ +....+++++|. ++-.+... ..++.++..|+.++ +.++|+++..-
T Consensus 6 ~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 6 WNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp EEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred CeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 47888887 555554444 333367899998 55444333 35677888888652 23578877554
No 358
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=62.96 E-value=35 Score=25.97 Aligned_cols=82 Identities=20% Similarity=0.224 Sum_probs=49.0
Q ss_pred eEEEecCCCcHHHHHHHHHCC--C-CeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC------CCCceEeeehhhhcCCC
Q 038208 136 SLVDVGGGNGSFSRIISEAFP--G-IKCTVLDL-PHVVANLPETDNLKYIAGDMFQF------VPPADAFLFKLVFHGLG 205 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~p--~-~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~------~p~~D~v~~~~vlh~~~ 205 (228)
+|| |=||+|..+..+++++- + .++++++. ++-.+.. ...+++++.+|+.++ +.+.|+++..-..
T Consensus 25 ~vl-VtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~---- 98 (236)
T 3qvo_A 25 NVL-ILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-YPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG---- 98 (236)
T ss_dssp EEE-EETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-CCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS----
T ss_pred EEE-EEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-ccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC----
Confidence 444 45667777777777642 2 57888887 4333222 246899999999872 2357887643321
Q ss_pred hhHHHHHHHHHHHHhccCC
Q 038208 206 DEDGLKILKKRREAIASNG 224 (228)
Q Consensus 206 d~~~~~il~~~~~aL~pgG 224 (228)
.......+++.++|+..|
T Consensus 99 -~~~~~~~~~~~~~~~~~~ 116 (236)
T 3qvo_A 99 -EDLDIQANSVIAAMKACD 116 (236)
T ss_dssp -TTHHHHHHHHHHHHHHTT
T ss_pred -CchhHHHHHHHHHHHHcC
Confidence 222234556667776554
No 359
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=62.95 E-value=6.8 Score=29.70 Aligned_cols=81 Identities=10% Similarity=0.184 Sum_probs=47.8
Q ss_pred eEEEecCCCcHHHHHHHHHC---CCCeEEEeec-hH-HHhcCC-CCCCeEEEeCCCCCC------CCCceEeeehhhhcC
Q 038208 136 SLVDVGGGNGSFSRIISEAF---PGIKCTVLDL-PH-VVANLP-ETDNLKYIAGDMFQF------VPPADAFLFKLVFHG 203 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~---p~~~~~~~Dl-p~-~i~~a~-~~~rv~~~~gD~~~~------~p~~D~v~~~~vlh~ 203 (228)
+||=.| |+|..+..+++++ .+.++++++. ++ .++... ...+++++.+|+.++ +.+.|+++..--..
T Consensus 7 ~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~- 84 (221)
T 3r6d_A 7 YITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES- 84 (221)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC-
T ss_pred EEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC-
Confidence 455555 5555555555432 4678899988 44 333221 357899999999862 23578877554321
Q ss_pred CChhHHHHHHHHHHHHhccCC
Q 038208 204 LGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 204 ~~d~~~~~il~~~~~aL~pgG 224 (228)
+- . .+++.++|+..|
T Consensus 85 --n~---~-~~~~~~~~~~~~ 99 (221)
T 3r6d_A 85 --GS---D-MASIVKALSRXN 99 (221)
T ss_dssp --HH---H-HHHHHHHHHHTT
T ss_pred --Ch---h-HHHHHHHHHhcC
Confidence 11 1 566666666554
No 360
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=60.28 E-value=7.7 Score=31.68 Aligned_cols=67 Identities=16% Similarity=0.239 Sum_probs=45.8
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCeE-EEeec-hHHHhcCCCCCCeEEEeCCCCC----CCCCceEeeehhhhcCC
Q 038208 136 SLVDVGGGNGSFSRIISEAFPGIKC-TVLDL-PHVVANLPETDNLKYIAGDMFQ----FVPPADAFLFKLVFHGL 204 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~p~~~~-~~~Dl-p~~i~~a~~~~rv~~~~gD~~~----~~p~~D~v~~~~vlh~~ 204 (228)
+|||+=||.|.+...+.+. +.++ ..+|+ +..++.-+..-.-+++.+|+.+ .+|..|+++...-...|
T Consensus 2 kvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~f 74 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSW 74 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGT
T ss_pred eEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCc
Confidence 6899999999999999887 4554 57787 5444432221123577889865 36678999876655544
No 361
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=60.18 E-value=29 Score=25.33 Aligned_cols=87 Identities=16% Similarity=0.098 Sum_probs=48.1
Q ss_pred CeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC------CCCceEeeehhhhcCC-
Q 038208 135 GSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF------VPPADAFLFKLVFHGL- 204 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~------~p~~D~v~~~~vlh~~- 204 (228)
.+|+=+ ||+|..+..+++.. .+.++++++. +.-.+.. ...+++++.+|+.++ +.++|+++..--....
T Consensus 4 ~~ilVt-GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~ 81 (206)
T 1hdo_A 4 KKIAIF-GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (206)
T ss_dssp CEEEEE-STTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CEEEEE-cCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-cCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCC
Confidence 355544 55677777666643 2467888887 4322221 146899999999762 2347877644332211
Q ss_pred -ChhHHHHHHHHHHHHhccC
Q 038208 205 -GDEDGLKILKKRREAIASN 223 (228)
Q Consensus 205 -~d~~~~~il~~~~~aL~pg 223 (228)
+.+......+++.++++..
T Consensus 82 ~~~~~n~~~~~~~~~~~~~~ 101 (206)
T 1hdo_A 82 SPTTVMSEGARNIVAAMKAH 101 (206)
T ss_dssp SCCCHHHHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHh
Confidence 1122334455555555543
No 362
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=60.00 E-value=8 Score=30.61 Aligned_cols=49 Identities=12% Similarity=0.181 Sum_probs=38.2
Q ss_pred HHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhchhhh
Q 038208 14 IELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLI 66 (228)
Q Consensus 14 ~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~ 66 (228)
.++.|+..|..+ +++|..| .++.|...|++++.+. ...|.+|+.+..+.
T Consensus 153 ~~~~IL~~L~~~-~~~s~~eLA~~lglsksTv~r~L~~Le~~GlV~r~~r---~~~~~LT~~G~~l~ 215 (244)
T 2wte_A 153 EEMKLLNVLYET-KGTGITELAKMLDKSEKTLINKIAELKKFGILTQKGK---DRKVELNELGLNVI 215 (244)
T ss_dssp HHHHHHHHHHHH-TCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETT---TTEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC---ccEEEECHHHHHHH
Confidence 456677777655 5788877 8999999999998742 57899999888654
No 363
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=59.42 E-value=5.9 Score=32.32 Aligned_cols=72 Identities=7% Similarity=-0.034 Sum_probs=48.4
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCe-EEEeec-hHHHhcCCC-CCCeEEEeCCCCC-C---C---CCceEeeehhhh
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIK-CTVLDL-PHVVANLPE-TDNLKYIAGDMFQ-F---V---PPADAFLFKLVF 201 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~-~~~~Dl-p~~i~~a~~-~~rv~~~~gD~~~-~---~---p~~D~v~~~~vl 201 (228)
...-+++|+=||.|.+...+.+..-+.+ +..+|+ +..++..+. .+...++.+|+.+ . + +.+|+++...-.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~ggpPC 93 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGSPC 93 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEECCCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEecCCC
Confidence 3456899999999999999998754444 578898 554443222 2345677889865 1 2 258998876544
Q ss_pred cC
Q 038208 202 HG 203 (228)
Q Consensus 202 h~ 203 (228)
..
T Consensus 94 Q~ 95 (295)
T 2qrv_A 94 ND 95 (295)
T ss_dssp GG
T ss_pred cc
Confidence 33
No 364
>3f6v_A Possible transcriptional regulator, ARSR family protein; probable transcriptional repressor ARSR family, structural genomics, PSI-2; 1.48A {Rhodococcus SP}
Probab=58.90 E-value=7.9 Score=28.13 Aligned_cols=54 Identities=15% Similarity=0.195 Sum_probs=40.6
Q ss_pred HHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhch
Q 038208 7 SMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASST 63 (228)
Q Consensus 7 ~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~ 63 (228)
..+|.--.++.|+..|.. +|+++.| -|+.|...|+++.... ++.-.|++++...
T Consensus 52 l~aL~~p~R~~IL~~L~~--~~~t~~eLa~~lgls~stvs~hL~~L~~aGlV~~~~~-Gr~~~y~lt~~~~ 119 (151)
T 3f6v_A 52 LEVAAEPTRRRLVQLLTS--GEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPRKD-GRFRYYRLDPQGL 119 (151)
T ss_dssp HHHHTSHHHHHHHHHGGG--CCEEHHHHHTTSSSCHHHHHHHHHHHHHTTSEEEEEE-TTEEEEEECHHHH
T ss_pred HHHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEec-CCEEEEEEChHHH
Confidence 456666778999999985 6898888 7899999999987651 1123588887553
No 365
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=58.67 E-value=6 Score=32.02 Aligned_cols=51 Identities=10% Similarity=0.135 Sum_probs=33.2
Q ss_pred CCCeEEEeCCCCC---CCC--CceEeeehhhhcCCCh------------------hHHHHHHHHHHHHhccCCC
Q 038208 175 TDNLKYIAGDMFQ---FVP--PADAFLFKLVFHGLGD------------------EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 175 ~~rv~~~~gD~~~---~~p--~~D~v~~~~vlh~~~d------------------~~~~~il~~~~~aL~pgG~ 225 (228)
..+++++++|.++ .++ .+|+|++.=-.+.-.+ +....+++.+++.|+|||.
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~ 92 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGR 92 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcE
Confidence 3567899999876 244 3899987654432110 1124678999999999974
No 366
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=57.96 E-value=18 Score=29.67 Aligned_cols=65 Identities=22% Similarity=0.184 Sum_probs=39.5
Q ss_pred CeEEEecCCCcHHHHHHHHHC----CCCeEEEeec-hH-------HHhcCC-----CCCCeEEEeCCCCCC-------CC
Q 038208 135 GSLVDVGGGNGSFSRIISEAF----PGIKCTVLDL-PH-------VVANLP-----ETDNLKYIAGDMFQF-------VP 190 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~----p~~~~~~~Dl-p~-------~i~~a~-----~~~rv~~~~gD~~~~-------~p 190 (228)
.+||=. ||+|..+..++++. .+.+++++|. +. ..+... ...+++++.+|+.++ ..
T Consensus 11 ~~vlVT-GatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 89 (362)
T 3sxp_A 11 QTILIT-GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL 89 (362)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS
T ss_pred CEEEEE-CCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc
Confidence 455544 56777777666543 5788999987 22 111111 145789999999762 23
Q ss_pred CceEeeehhh
Q 038208 191 PADAFLFKLV 200 (228)
Q Consensus 191 ~~D~v~~~~v 200 (228)
++|+|+-.-.
T Consensus 90 ~~D~vih~A~ 99 (362)
T 3sxp_A 90 HFDYLFHQAA 99 (362)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 5788864433
No 367
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=57.83 E-value=11 Score=34.29 Aligned_cols=85 Identities=14% Similarity=0.142 Sum_probs=0.0
Q ss_pred eEEEecCCCcHHHHHHHHHC------------CCCeEEEeec----hHHHhcCCCC------------------------
Q 038208 136 SLVDVGGGNGSFSRIISEAF------------PGIKCTVLDL----PHVVANLPET------------------------ 175 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~------------p~~~~~~~Dl----p~~i~~a~~~------------------------ 175 (228)
+|+|+|-|+|.......+.+ ..++++.++. ++.+..+-..
T Consensus 69 ~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 148 (676)
T 3ps9_A 69 VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHR 148 (676)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEEE
T ss_pred EEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCceE
Q ss_pred -------CCeEEEeCCCCC---CC-----CCceEeee-----hhhhcCCChhHHHHHHHHHHHHhccCC
Q 038208 176 -------DNLKYIAGDMFQ---FV-----PPADAFLF-----KLVFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 176 -------~rv~~~~gD~~~---~~-----p~~D~v~~-----~~vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
-++++.-||+.+ .+ ..+|++++ ..--.-|+.+ +++++++.++|||
T Consensus 149 ~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~----~~~~l~~~~~~g~ 213 (676)
T 3ps9_A 149 LLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQN----LFNAMARLARPGG 213 (676)
T ss_dssp EEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHH----HHHHHHHHEEEEE
T ss_pred EEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHH----HHHHHHHHhCCCC
No 368
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=57.72 E-value=11 Score=29.33 Aligned_cols=63 Identities=16% Similarity=0.060 Sum_probs=39.5
Q ss_pred CCCeEEEecCCCcHHHH--HHHHHCCCCeEEEeec---hHHHhcCCCCCCeEEEeCCCCC-CCCCceEeeeh
Q 038208 133 GLGSLVDVGGGNGSFSR--IISEAFPGIKCTVLDL---PHVVANLPETDNLKYIAGDMFQ-FVPPADAFLFK 198 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~--~l~~~~p~~~~~~~Dl---p~~i~~a~~~~rv~~~~gD~~~-~~p~~D~v~~~ 198 (228)
...+||=||||.=.... .|++. +.++++++- +++.+.+ +..+++++.+++.. .+.++|+|+..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~-~~~~i~~i~~~~~~~dL~~adLVIaA 98 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWE-AKGQLRVKRKKVGEEDLLNVFFIVVA 98 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHH-HTTSCEEECSCCCGGGSSSCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHH-HcCCcEEEECCCCHhHhCCCCEEEEC
Confidence 46789999998544333 23333 456777763 3322222 24678898888865 46679998865
No 369
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=57.62 E-value=11 Score=26.38 Aligned_cols=29 Identities=14% Similarity=0.051 Sum_probs=24.6
Q ss_pred HHHHHHhCCceeecccCCCCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~ 66 (228)
+++.|...|++++.. ...|.+|+.+..+.
T Consensus 42 ~l~~Le~~Glv~r~~----~~~~~LT~~g~~~~ 70 (142)
T 1on2_A 42 MVQKLDKDEYLIYEK----YRGLVLTSKGKKIG 70 (142)
T ss_dssp HHHHHHHTTSEEEET----TTEEEECHHHHHHH
T ss_pred HHHHHHHCCCEEEee----CceEEEchhHHHHH
Confidence 899999999999886 57899999887544
No 370
>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structu genomics, protein structure initiative, midwest center for structural genomics; HET: GOL; 2.00A {Rhodococcus jostii}
Probab=57.50 E-value=7 Score=27.66 Aligned_cols=53 Identities=13% Similarity=0.063 Sum_probs=31.6
Q ss_pred HHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 14 IELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 14 ~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
.++.++..|...++++|..| +++-|...|++++.... .+.-.+.+|+.++.+.
T Consensus 40 ~q~~vL~~l~~~~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 108 (150)
T 3fm5_A 40 RSYSVLVLACEQAEGVNQRGVAATMGLDPSQIVGLVDELEERGLVVRTLDPSDRRNKLIAATEEGRRLR 108 (150)
T ss_dssp HHHHHHHHHHHSTTCCCSHHHHHHHTCCHHHHHHHHHHHHTTTSEEC-----------CEECHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeeCCccccchheeeECHHHHHHH
Confidence 35556667765444667666 88999999999886421 0112377888777544
No 371
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=56.38 E-value=7.5 Score=26.06 Aligned_cols=51 Identities=16% Similarity=0.241 Sum_probs=35.4
Q ss_pred HHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChh
Q 038208 8 MSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTAS 61 (228)
Q Consensus 8 ~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~ 61 (228)
.+|..-.++.|+..|.. ++.++.| .|+.|...|++..... ++...|++++.
T Consensus 21 ~~l~~~~r~~IL~~L~~--~~~~~~ela~~l~is~stvs~~L~~L~~~Glv~~~~~-gr~~~y~l~~~ 85 (106)
T 1r1u_A 21 KALGDYNRIRIMELLSV--SEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQ-GQSMIYSLDDI 85 (106)
T ss_dssp HHTCSHHHHHHHHHHHH--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEE-TTEEEEEESSH
T ss_pred HHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEe-CCEEEEEEChH
Confidence 34444567889999985 6888887 7889999999987652 11124666653
No 372
>4a5n_A Uncharacterized HTH-type transcriptional regulato; activator, DNA binding, MARR-like; 1.81A {Bacillus subtilis} PDB: 4a5m_A
Probab=56.08 E-value=15 Score=25.97 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=24.3
Q ss_pred HHHHHHhCCceeecccCC--CCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVNG--QEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~~--~~~~~~~t~~~~~l~ 66 (228)
.|+.|...|++++..... ..-.|++|+.++.|.
T Consensus 60 ~L~~Le~~GLV~R~~~~~d~r~v~y~LT~~G~~l~ 94 (131)
T 4a5n_A 60 QLRELEADGIVHREVYHQVPPKVEYSLTEFGRTLE 94 (131)
T ss_dssp HHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGH
T ss_pred HHHHHHHCCCEEEEecCCCCCeEEEEECHhHHHHH
Confidence 899999999999875311 123589999887655
No 373
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=56.06 E-value=14 Score=26.72 Aligned_cols=37 Identities=8% Similarity=0.205 Sum_probs=28.9
Q ss_pred HHHHcChhhHhhhCCCCcCHHH-------------------HHHHHHhCCceeecc
Q 038208 12 CAIELSIADIIHCHGRAITLSE-------------------LMRLLVHSGCFNKTK 48 (228)
Q Consensus 12 ~a~~lglfd~L~~~~~p~t~~e-------------------ll~~L~~~g~l~~~~ 48 (228)
+--+.-|++.|...+++.|++| .|+.|+..|++.+..
T Consensus 26 T~qR~~IL~~l~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~ 81 (150)
T 2xig_A 26 SKQREEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFISVLE 81 (150)
T ss_dssp HHHHHHHHHHHHHCSSCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCcEEEEE
Confidence 3445568888877656888888 788999999998865
No 374
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=55.95 E-value=13 Score=26.23 Aligned_cols=45 Identities=11% Similarity=0.322 Sum_probs=30.0
Q ss_pred HHcChhhHhhhCC-CCcCHHH-------------------HHHHHHhCCceeecccCCCCCeEeC
Q 038208 14 IELSIADIIHCHG-RAITLSE-------------------LMRLLVHSGCFNKTKVNGQEEAYGL 58 (228)
Q Consensus 14 ~~lglfd~L~~~~-~p~t~~e-------------------ll~~L~~~g~l~~~~~~~~~~~~~~ 58 (228)
.+.-|++.|...+ ++.|++| .|+.|+..|++.+....++...|..
T Consensus 19 qR~~Il~~L~~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y~~ 83 (136)
T 1mzb_A 19 PRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFEL 83 (136)
T ss_dssp HHHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEEEECSSSSSCEEEE
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHHHHHCCcEEEEEeCCCceEEEe
Confidence 3455777787654 5788777 7889999999988753222345654
No 375
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=55.48 E-value=11 Score=31.17 Aligned_cols=66 Identities=20% Similarity=0.293 Sum_probs=46.9
Q ss_pred CCeEEEecCCCcHHHHHHHHHCCC----CeEEEeechHHHhcCCCCCCeEEEeCCCCC-C--------CCCceEeeehhh
Q 038208 134 LGSLVDVGGGNGSFSRIISEAFPG----IKCTVLDLPHVVANLPETDNLKYIAGDMFQ-F--------VPPADAFLFKLV 200 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~p~----~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~-~--------~p~~D~v~~~~v 200 (228)
...||=+|.+.|.+..-|.+.||+ ++.+++|-.......+...+|+++.. +++ . +.+.++++++.+
T Consensus 76 g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~~Le~~~ni~li~~-ffde~~i~~l~~~~~~~~vLfISDI 154 (348)
T 1vpt_A 76 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTR-FVDEEYLRSIKKQLHPSKIILISDV 154 (348)
T ss_dssp TCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEEC-CCCHHHHHHHHHHHTTSCEEEEECC
T ss_pred CCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhhhhcCCCcEEeehh-hcCHHHHHHHHHHhcCCCEEEEEec
Confidence 459999999999999999998876 79999997333334444557877765 443 2 123577777766
No 376
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=54.96 E-value=52 Score=23.09 Aligned_cols=63 Identities=21% Similarity=0.226 Sum_probs=38.3
Q ss_pred CeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-h-HHHhcCCC--CCCeEEEeCCCCCC-------CCCceEeeehh
Q 038208 135 GSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-P-HVVANLPE--TDNLKYIAGDMFQF-------VPPADAFLFKL 199 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p-~~i~~a~~--~~rv~~~~gD~~~~-------~p~~D~v~~~~ 199 (228)
.+++=+|+ |..+..+++.. -+.+++++|. + +.++.... ...+.++.||..++ +.++|++++..
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 45666665 66666666543 2567888887 3 32222221 34688999998752 33578776653
No 377
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=53.20 E-value=12 Score=31.76 Aligned_cols=31 Identities=26% Similarity=0.516 Sum_probs=25.5
Q ss_pred CeEEEecCCCcHHHH--HHHHHCCCCeEEEeec
Q 038208 135 GSLVDVGGGNGSFSR--IISEAFPGIKCTVLDL 165 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~--~l~~~~p~~~~~~~Dl 165 (228)
++||=||+|.+.+.. .|.+..|+.+++++|-
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 479999999987544 5777789999999984
No 378
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=52.54 E-value=24 Score=27.51 Aligned_cols=84 Identities=15% Similarity=0.161 Sum_probs=48.7
Q ss_pred ecCCCcHHHHHHHHHC----CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC------CCCceEeeehhhhcCCChhH
Q 038208 140 VGGGNGSFSRIISEAF----PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF------VPPADAFLFKLVFHGLGDED 208 (228)
Q Consensus 140 vGgG~G~~~~~l~~~~----p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~------~p~~D~v~~~~vlh~~~d~~ 208 (228)
|=||+|..+..+++.. |+.++++++. +.-.+... ..+++++.+|+.++ +.++|+++..-..+ +.++.
T Consensus 5 VtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~-~~~~~ 82 (287)
T 2jl1_A 5 VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH-YDNTL 82 (287)
T ss_dssp ETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC-SCHHH
T ss_pred EEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC-cCchH
Confidence 3467888888777754 3567888887 22111110 25789999999762 23578876543332 22222
Q ss_pred HHHHHHHHHHHhccCCC
Q 038208 209 GLKILKKRREAIASNGE 225 (228)
Q Consensus 209 ~~~il~~~~~aL~pgG~ 225 (228)
.....+++.++++..|+
T Consensus 83 n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 83 LIVQHANVVKAARDAGV 99 (287)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 34455666666665543
No 379
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=51.86 E-value=15 Score=24.85 Aligned_cols=31 Identities=23% Similarity=0.278 Sum_probs=24.2
Q ss_pred HHHHHHhCCceeecccCCCCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~ 66 (228)
.|+.|...|++++... ..-.|++|+.++.+.
T Consensus 63 ~L~~Le~~GlV~r~~~--r~~~y~LT~~G~~l~ 93 (111)
T 3df8_A 63 RIKDLIDSGLVERRSG--QITTYALTEKGMNVR 93 (111)
T ss_dssp HHHHHHHTTSEEEEES--SSEEEEECHHHHHHH
T ss_pred HHHHHHHCCCEEEeec--CcEEEEECccHHHHH
Confidence 7999999999998741 235799999887554
No 380
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=51.81 E-value=4.5 Score=27.45 Aligned_cols=45 Identities=16% Similarity=0.280 Sum_probs=32.1
Q ss_pred HHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChh
Q 038208 14 IELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTAS 61 (228)
Q Consensus 14 ~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~ 61 (228)
.++.|+..|.. +++|+.| .|+.|...|+++.... ++...|++++.
T Consensus 26 ~r~~IL~~L~~--~~~s~~eLa~~lgis~stvs~~L~~L~~~GlV~~~~~-gr~~~y~l~~~ 84 (108)
T 2kko_A 26 RRLQILDLLAQ--GERAVEAIATATGMNLTTASANLQALKSGGLVEARRE-GTRQYYRIAGE 84 (108)
T ss_dssp TTHHHHHHHTT--CCEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEEEE-TTEEEEEESCH
T ss_pred HHHHHHHHHHc--CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEe-CCEEEEEEChH
Confidence 46778888875 6888887 7899999999987651 11224777653
No 381
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=50.92 E-value=29 Score=25.92 Aligned_cols=59 Identities=14% Similarity=0.069 Sum_probs=39.8
Q ss_pred EEEecCCCcHHHHHHHHHCC--CCeEEEeec-hHHHhcCCCCCCeEEEeCCCCC-C------CCCceEeeehh
Q 038208 137 LVDVGGGNGSFSRIISEAFP--GIKCTVLDL-PHVVANLPETDNLKYIAGDMFQ-F------VPPADAFLFKL 199 (228)
Q Consensus 137 vlDvGgG~G~~~~~l~~~~p--~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~-~------~p~~D~v~~~~ 199 (228)
||= =||+|..+..++++.- +.++++++. +.-.+ ...+++++.+|+.+ + +.+.|+++..-
T Consensus 3 ilI-tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 3 IFI-VGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP---QYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp EEE-ESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC---CCTTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred EEE-ECCCCHHHHHHHHHHHHCCCEEEEEECCccchh---hcCCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 443 3577888888887653 457899988 43222 23789999999987 3 23578887544
No 382
>2jsc_A Transcriptional regulator RV1994C/MT2050; cadmium, transcriptional repressor, solution structure, STRU genomics; NMR {Mycobacterium tuberculosis}
Probab=50.55 E-value=7.3 Score=26.81 Aligned_cols=52 Identities=17% Similarity=0.094 Sum_probs=35.5
Q ss_pred HHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChh
Q 038208 7 SMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTAS 61 (228)
Q Consensus 7 ~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~ 61 (228)
..+|.--.++.|+..|.. +|.+..| .|+.|...|+++.... ++.-.|++++.
T Consensus 15 ~~aL~~~~r~~IL~~L~~--~~~~~~eLa~~lgis~stvs~~L~~L~~~GlV~~~~~-gr~~~y~l~~~ 80 (118)
T 2jsc_A 15 GRALADPTRCRILVALLD--GVCYPGQLAAHLGLTRSNVSNHLSCLRGCGLVVATYE-GRQVRYALADS 80 (118)
T ss_dssp HHHHSSHHHHHHHHHHHT--TCCSTTTHHHHHSSCHHHHHHHHHHHTTTTSEEEEEC-SSSEEEEESSH
T ss_pred HHHhCCHHHHHHHHHHHc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEEEEE-CCEEEEEEChH
Confidence 445555667888888875 5666555 7889999999987641 11224777764
No 383
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=50.11 E-value=20 Score=23.91 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=23.2
Q ss_pred HHHHHHhCCceeecccCC--CCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVNG--QEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~~--~~~~~~~t~~~~~l~ 66 (228)
.|+.|...|++++..... ..-.|++|+.++.+.
T Consensus 48 ~L~~Le~~GlI~r~~~~~d~r~~~y~LT~~G~~l~ 82 (107)
T 2hzt_A 48 QLRELEADGVINRIVYNQVPPKVEYELSEYGRSLE 82 (107)
T ss_dssp HHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGH
T ss_pred HHHHHHHCCCEEEeecCCCCCeEEEEECccHHHHH
Confidence 789999999999865211 123588998876544
No 384
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=49.84 E-value=25 Score=23.22 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=24.2
Q ss_pred HHHHHHhCCceeecccCCCCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~ 66 (228)
.++.|...|++++.. +.|.+|+-+..+.
T Consensus 40 ~l~~L~~~GLI~~~~-----~~~~LT~kG~~~l 67 (95)
T 1r7j_A 40 YIKMLMDLEIIRQEG-----KQYMLTKKGEELL 67 (95)
T ss_dssp HHHHHHHTTSEEEET-----TEEEECHHHHHHH
T ss_pred HHHHHHHCCCeEEEC-----CeeEEChhHHHHH
Confidence 899999999999984 6799999988443
No 385
>3f6o_A Probable transcriptional regulator, ARSR family protein; transcriptional regulator,RHA00566,MCSG, structural genomics, PSI-2; 1.90A {Rhodococcus SP}
Probab=49.33 E-value=12 Score=25.53 Aligned_cols=53 Identities=17% Similarity=0.201 Sum_probs=39.2
Q ss_pred HHHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhc
Q 038208 7 SMSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASS 62 (228)
Q Consensus 7 ~~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~ 62 (228)
..+|.--.++.|+..|.. +|+++.| -|+.|...|+++.... ++...|++++..
T Consensus 12 ~~al~~~~R~~Il~~L~~--~~~~~~eLa~~l~is~~tvs~hL~~L~~~GlV~~~~~-gr~~~y~l~~~~ 78 (118)
T 3f6o_A 12 FQALADPTRRAVLGRLSR--GPATVSELAKPFDMALPSFMKHIHFLEDSGWIRTHKQ-GRVRTCAIEKEP 78 (118)
T ss_dssp HHHHTSHHHHHHHHHHHT--CCEEHHHHHTTCCSCHHHHHHHHHHHHHTTSEEEEEE-TTEEEEEECSHH
T ss_pred HHHhCCHHHHHHHHHHHh--CCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCeEEEec-CCEEEEEECHHH
Confidence 455555678999999985 7898888 7899999999987652 112347777644
No 386
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=48.48 E-value=8.7 Score=28.46 Aligned_cols=49 Identities=31% Similarity=0.385 Sum_probs=34.5
Q ss_pred EEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCC--CeEEEeCCC
Q 038208 137 LVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETD--NLKYIAGDM 185 (228)
Q Consensus 137 vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~--rv~~~~gD~ 185 (228)
.-=+.||||.=..-.+.++|++++.++--+.....+++.. +|-.+.+-+
T Consensus 64 ~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnaNVL~lG~rv 114 (162)
T 2vvp_A 64 LGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRM 114 (162)
T ss_dssp EEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEEGGG
T ss_pred eEEEEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 3445799999888899999999987776676666666533 444444443
No 387
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=48.27 E-value=21 Score=25.53 Aligned_cols=33 Identities=27% Similarity=0.424 Sum_probs=23.8
Q ss_pred HHHHHHhCCceeecccC-CCCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVN-GQEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~-~~~~~~~~t~~~~~l~ 66 (228)
.|+.|...|++++.... ++.-.|.+|+.++.+.
T Consensus 57 ~L~~Le~~GlI~r~~~~~d~~~~y~LT~~G~~l~ 90 (146)
T 2f2e_A 57 RLRNLVEHGVMVAVPAESGSHQEYRLTDKGRALF 90 (146)
T ss_dssp HHHHHHHTTSEEEEECSSSSCEEEEECHHHHTTH
T ss_pred HHHHHHHCCCEEEEecCCCCeEEEEECchHHHHH
Confidence 89999999999987521 0123689999876543
No 388
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1, putative MARR-like transcription regulator, MAR structural genomics; 2.38A {Bacillus cereus}
Probab=48.08 E-value=16 Score=25.06 Aligned_cols=51 Identities=12% Similarity=0.183 Sum_probs=33.4
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 35 ~~~iL~~l~~~-~~~~~~ela~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~r~~~~~lT~~G~~~~ 101 (139)
T 3bja_A 35 QFGVIQVLAKS-GKVSMSKLIENMGCVPSNMTTMIQRMKRDGYVMTEKNPNDQRETLVYLTKKGEETK 101 (139)
T ss_dssp HHHHHHHHHHS-CSEEHHHHHHHCSSCCTTHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHCCChhHHHHHHHHHHHCCCeeeccCCCCCceeEEEECHHHHHHH
Confidence 44566666654 4666666 89999999999876421 1222377888877544
No 389
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=48.08 E-value=24 Score=22.62 Aligned_cols=47 Identities=13% Similarity=0.120 Sum_probs=34.4
Q ss_pred HHcChhhHhhhCCCCcCHHH---------------HHHHHHhCCceeecccCCCCCeEeCChhch
Q 038208 14 IELSIADIIHCHGRAITLSE---------------LMRLLVHSGCFNKTKVNGQEEAYGLTASST 63 (228)
Q Consensus 14 ~~lglfd~L~~~~~p~t~~e---------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~ 63 (228)
.+-.|.+.|... +|.|+.+ -|..|...|+++..+. +++ .|.+|+.++
T Consensus 12 ~~~~IL~~Lk~~-g~~ta~eiA~~Lgit~~~aVr~hL~~Le~eGlV~~~~~-gRP-~w~LT~~g~ 73 (79)
T 1xmk_A 12 IKEKICDYLFNV-SDSSALNLAKNIGLTKARDINAVLIDMERQGDVYRQGT-TPP-IWHLTDKKR 73 (79)
T ss_dssp HHHHHHHHHHHT-CCEEHHHHHHHHCGGGHHHHHHHHHHHHHTTSEEEECS-SSC-EEEECHHHH
T ss_pred HHHHHHHHHHHc-CCcCHHHHHHHcCCCcHHHHHHHHHHHHHCCCEEecCC-CCC-CeEeCHhHH
Confidence 355677788776 5777766 6889999999986642 233 899998765
No 390
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=47.80 E-value=35 Score=27.49 Aligned_cols=66 Identities=17% Similarity=0.171 Sum_probs=39.9
Q ss_pred CCeEEEecCCCcHHHHHHHHHC--CCCeEEEeechHHHhcCCCCCCeEEEeCCCCCC------CCCceEeeehhhhcCCC
Q 038208 134 LGSLVDVGGGNGSFSRIISEAF--PGIKCTVLDLPHVVANLPETDNLKYIAGDMFQF------VPPADAFLFKLVFHGLG 205 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dlp~~i~~a~~~~rv~~~~gD~~~~------~p~~D~v~~~~vlh~~~ 205 (228)
..+||=. ||+|.++..++++. -+.+++++|... ...+++++.+|+.++ +.+.|+|+..-....++
T Consensus 19 ~~~vlVt-GatG~iG~~l~~~L~~~G~~V~~~~r~~------~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~ 91 (347)
T 4id9_A 19 SHMILVT-GSAGRVGRAVVAALRTQGRTVRGFDLRP------SGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWA 91 (347)
T ss_dssp --CEEEE-TTTSHHHHHHHHHHHHTTCCEEEEESSC------CSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCSS
T ss_pred CCEEEEE-CCCChHHHHHHHHHHhCCCEEEEEeCCC------CCCCccEEecCcCCHHHHHHHHhCCCEEEECCcccCcc
Confidence 3456655 56777777666643 246788888621 126788999999762 23578887554444444
Q ss_pred h
Q 038208 206 D 206 (228)
Q Consensus 206 d 206 (228)
.
T Consensus 92 ~ 92 (347)
T 4id9_A 92 P 92 (347)
T ss_dssp G
T ss_pred h
Confidence 3
No 391
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=47.51 E-value=18 Score=25.35 Aligned_cols=51 Identities=14% Similarity=0.235 Sum_probs=35.3
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 42 ~~~iL~~l~~~-~~~t~~ela~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~ 108 (152)
T 3bj6_A 42 QRAILEGLSLT-PGATAPQLGAALQMKRQYISRILQEVQRAGLIERRTNPEHARSHRYWLTPRGEAII 108 (152)
T ss_dssp HHHHHHHHHHS-TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCSSSTTSCEEEECHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCeeecCCcccccceeeEEChhhHHHH
Confidence 55567777765 4777776 89999999999986421 1223578888877544
No 392
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=47.50 E-value=24 Score=25.15 Aligned_cols=51 Identities=12% Similarity=0.219 Sum_probs=36.4
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.|+..|... +++|..| +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 48 q~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~ 114 (162)
T 3k0l_A 48 QFTALSVLAAK-PNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKL 114 (162)
T ss_dssp HHHHHHHHHHC-TTCCHHHHHHHHTSCGGGHHHHHHHHHHTTSEEEEECCSSSCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCcCeEecCCCCcCCeeEeEECHhHHHHH
Confidence 45577777776 4788777 89999999999987521 1223478898887554
No 393
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=47.16 E-value=45 Score=22.67 Aligned_cols=61 Identities=11% Similarity=0.164 Sum_probs=36.7
Q ss_pred CeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCCceEeeeh
Q 038208 135 GSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-------VPPADAFLFK 198 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-------~p~~D~v~~~ 198 (228)
.+|+=+|+ |..+..+++.. .+.+++++|. ++.++.+++ ....++.+|..++ ..++|+++..
T Consensus 7 ~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 7 KQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-YATHAVIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT-TCSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hCCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 46888886 55555554432 2457888887 666665543 2456677777541 2247877654
No 394
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=47.03 E-value=13 Score=30.98 Aligned_cols=85 Identities=15% Similarity=0.133 Sum_probs=51.7
Q ss_pred CCCeEEEec--CCCcHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEe--CCCCC---CCC--CceEeeehhhhc
Q 038208 133 GLGSLVDVG--GGNGSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIA--GDMFQ---FVP--PADAFLFKLVFH 202 (228)
Q Consensus 133 ~~~~vlDvG--gG~G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~--gD~~~---~~p--~~D~v~~~~vlh 202 (228)
...+||=+| |+.|.++..+++.....++++.|. ++-.+.+++..--.++. .|+.+ ... ++|+++-..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~--- 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTT--- 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECS---
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECC---
Confidence 456888888 567889999999766789999998 55555444311111111 11111 111 478776422
Q ss_pred CCChhHHHHHHHHHHHHhccCCC
Q 038208 203 GLGDEDGLKILKKRREAIASNGE 225 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG~ 225 (228)
.. ...++.+.+.|+|+|.
T Consensus 248 --g~---~~~~~~~~~~l~~~G~ 265 (363)
T 4dvj_A 248 --HT---DKHAAEIADLIAPQGR 265 (363)
T ss_dssp --CH---HHHHHHHHHHSCTTCE
T ss_pred --Cc---hhhHHHHHHHhcCCCE
Confidence 11 2467888899999963
No 395
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=47.01 E-value=19 Score=24.86 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=23.5
Q ss_pred CCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChh
Q 038208 27 RAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTAS 61 (228)
Q Consensus 27 ~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~ 61 (228)
+|+|..| +|+.|...|+++... +..+.|.++.-
T Consensus 25 ~~~s~~ela~~~~i~~~~v~~il~~L~~~Glv~~~~--g~~ggy~L~~~ 71 (129)
T 2y75_A 25 GPTSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKSIR--GAYGGYVLGSE 71 (129)
T ss_dssp CCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEC------CCEEESSC
T ss_pred CcCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEecC--CCCCceEeCCC
Confidence 5778776 899999999998764 11367887653
No 396
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=46.67 E-value=27 Score=24.19 Aligned_cols=52 Identities=21% Similarity=0.247 Sum_probs=35.7
Q ss_pred HHcChhhHhhh-CCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 14 IELSIADIIHC-HGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 14 ~~lglfd~L~~-~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
.++.++..|.. . +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 36 ~~~~iL~~l~~~~-~~~~~~~la~~l~i~~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 104 (147)
T 2hr3_A 36 SQLVVLGAIDRLG-GDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRRNL 104 (147)
T ss_dssp HHHHHHHHHHHTT-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC------CCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCCCHHHHHHHhCCChhhHHHHHHHHHHCCCEeeCCCCCCCCceeeEECHHHHHHH
Confidence 45667778876 4 5788777 89999999999986421 1223477888877544
No 397
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=46.66 E-value=26 Score=22.52 Aligned_cols=51 Identities=20% Similarity=0.281 Sum_probs=33.7
Q ss_pred HHHHcChhhHhhhCC--CCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChhchh
Q 038208 12 CAIELSIADIIHCHG--RAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTASSTL 64 (228)
Q Consensus 12 ~a~~lglfd~L~~~~--~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~ 64 (228)
.-.+..|++.|..++ .++|+.| .|.-|...|+++..+ .+.+.|...+....
T Consensus 9 ~~~~~~IL~~L~~~~pg~~~t~~eLA~~Lgvsr~tV~~~L~~Le~~G~I~~~g--~~~~~W~i~~~~~~ 75 (81)
T 1qbj_A 9 QDQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEA--GTPPLWKIAVSTQA 75 (81)
T ss_dssp HHHHHHHHHHHHHHCTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEES--SSSCEEEEC-----
T ss_pred hHHHHHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecC--CCCCeeEEeCcHHh
Confidence 334667888887752 2688887 788899999998764 23578887776543
No 398
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=46.33 E-value=10 Score=28.15 Aligned_cols=40 Identities=18% Similarity=0.212 Sum_probs=30.2
Q ss_pred EEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCCC
Q 038208 138 VDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETDN 177 (228)
Q Consensus 138 lDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~r 177 (228)
-=+.||||.=..-.+.++|++++.++--+.....+++..+
T Consensus 82 GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~hNn 121 (166)
T 3s5p_A 82 CILVCGTGIGISIAANKMKGIRCALCSTEYDAEMARKHNN 121 (166)
T ss_dssp EEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTTC
T ss_pred EEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCC
Confidence 3456999998888899999999877766766666665333
No 399
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=46.23 E-value=18 Score=25.13 Aligned_cols=52 Identities=13% Similarity=0.165 Sum_probs=33.1
Q ss_pred HHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 14 IELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 14 ~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
.++.++..|... +++|..| +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 38 ~~~~vL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~ 105 (142)
T 3ech_A 38 PDVHVLKLIDEQ-RGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIH 105 (142)
T ss_dssp HHHHHHHHHHHT-TTCCHHHHHHHHC---CHHHHHHHHHHHTTSEEC----------CCEECHHHHHHH
T ss_pred HHHHHHHHHHhC-CCcCHHHHHHHhCCCHHHHHHHHHHHHHCCCEeeccCCCCCCeeeeEECHHHHHHH
Confidence 455677777776 4788777 89999999999986421 1122367888776444
No 400
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=46.23 E-value=16 Score=25.34 Aligned_cols=51 Identities=14% Similarity=0.164 Sum_probs=34.2
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..| +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 39 ~~~iL~~l~~~-~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 105 (143)
T 3oop_A 39 QWSVLEGIEAN-EPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKET 105 (143)
T ss_dssp HHHHHHHHHHH-SSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHCCCHhhHHHHHHHHHHCCCeeccCCCccCceeeeeECHHHHHHH
Confidence 45566666654 4677666 89999999999976421 1334578888887554
No 401
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=46.09 E-value=19 Score=25.05 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=33.5
Q ss_pred HHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 14 IELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 14 ~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
.++.++..|... +++|..| +++.|...|++++.... .+...+.+|+.++.+.
T Consensus 41 ~~~~iL~~l~~~-~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~lT~~G~~~~ 108 (148)
T 3nrv_A 41 TEWRIISVLSSA-SDCSVQKISDILGLDKAAVSRTVKKLEEKKYIEVNGHSEDKRTYAINLTEMGQELY 108 (148)
T ss_dssp HHHHHHHHHHHS-SSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC---------CCBEECHHHHHHH
T ss_pred HHHHHHHHHHcC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCCCCcceeEeEECHhHHHHH
Confidence 345567777765 4777766 89999999999987421 1234577888877544
No 402
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=45.96 E-value=8.7 Score=28.23 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=30.4
Q ss_pred EEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCCC
Q 038208 137 LVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPETD 176 (228)
Q Consensus 137 vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~~ 176 (228)
.-=+.||||.=..-.+.++|++++..+--+.....+++..
T Consensus 72 ~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hN 111 (155)
T 1o1x_A 72 FGILLCGTGLGMSIAANRYRGIRAALCLFPDMARLARSHN 111 (155)
T ss_dssp EEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTT
T ss_pred eEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHcC
Confidence 3345699999888899999999987776677666666533
No 403
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=45.89 E-value=2.9 Score=38.27 Aligned_cols=89 Identities=16% Similarity=0.236 Sum_probs=0.0
Q ss_pred eEEEecCCCcHHHHHHHHHCCC------------CeEEEeec-hHHHhcCCC----------------------------
Q 038208 136 SLVDVGGGNGSFSRIISEAFPG------------IKCTVLDL-PHVVANLPE---------------------------- 174 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~p~------------~~~~~~Dl-p~~i~~a~~---------------------------- 174 (228)
+|+|+|-|+|.......+.+.+ ++++.++. |-..+.+++
T Consensus 61 ~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r 140 (689)
T 3pvc_A 61 IFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGCHR 140 (689)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEEE
T ss_pred EEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCceE
Q ss_pred ------CCCeEEEeCCCCCCCCCc----eEeeehhhhcCCChhH-----HHHHHHHHHHHhccCC
Q 038208 175 ------TDNLKYIAGDMFQFVPPA----DAFLFKLVFHGLGDED-----GLKILKKRREAIASNG 224 (228)
Q Consensus 175 ------~~rv~~~~gD~~~~~p~~----D~v~~~~vlh~~~d~~-----~~~il~~~~~aL~pgG 224 (228)
.-+++++.||..+-++.. +..+=.+.|.-+++.. ...+++.+++.++|||
T Consensus 141 ~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~ 205 (689)
T 3pvc_A 141 ILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGG 205 (689)
T ss_dssp EEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEE
T ss_pred EEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCC
No 404
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=45.88 E-value=10 Score=27.71 Aligned_cols=47 Identities=21% Similarity=0.190 Sum_probs=33.9
Q ss_pred EecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCC--CCeEEEeCCC
Q 038208 139 DVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPET--DNLKYIAGDM 185 (228)
Q Consensus 139 DvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~--~rv~~~~gD~ 185 (228)
=+.||||.=..-.+.++|++++..+--+.....+++. .+|-.+.+-+
T Consensus 62 IliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnaNVl~lG~rv 110 (149)
T 3he8_A 62 IVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERV 110 (149)
T ss_dssp EEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 3569999988888999999998777667777666653 3454444444
No 405
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=45.86 E-value=23 Score=24.95 Aligned_cols=51 Identities=12% Similarity=0.146 Sum_probs=35.0
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 45 ~~~iL~~l~~~-~~~t~~ela~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~ 111 (155)
T 3cdh_A 45 EWRVLACLVDN-DAMMITRLAKLSLMEQSRMTRIVDQMDARGLVTRVADAKDKRRVRVRLTDDGRALA 111 (155)
T ss_dssp HHHHHHHHSSC-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC------CCCEEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccCCCcCCeeEeEECHHHHHHH
Confidence 55677777765 5788777 89999999999986421 1223477888877544
No 406
>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for structural genomics, PSI, protein structure initiative, MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28
Probab=45.59 E-value=17 Score=25.25 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=34.4
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 35 ~~~iL~~l~~~-~~~~~~~la~~l~~s~~tvs~~l~~L~~~glv~r~~~~~d~r~~~~~lT~~G~~~~ 101 (145)
T 2a61_A 35 QFDILQKIYFE-GPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVI 101 (145)
T ss_dssp HHHHHHHHHHH-CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCCCchhHHHHHHHHHHCCCeeecCCCCCCceEEEEECHHHHHHH
Confidence 55566677654 4777776 89999999999986410 0112477888877544
No 407
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=45.55 E-value=21 Score=24.81 Aligned_cols=51 Identities=10% Similarity=0.101 Sum_probs=35.4
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 33 q~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 99 (145)
T 3g3z_A 33 LFAVLYTLATE-GSRTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYA 99 (145)
T ss_dssp HHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECCCSSCGGGSCEEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeccCCCCCceeeeeEChhHHHHH
Confidence 55567777655 4677777 89999999999986421 1223588888887544
No 408
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=45.25 E-value=32 Score=27.57 Aligned_cols=57 Identities=18% Similarity=0.315 Sum_probs=36.9
Q ss_pred cCCCcHHHHHHHHHC---CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC---CC----CceEeee
Q 038208 141 GGGNGSFSRIISEAF---PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF---VP----PADAFLF 197 (228)
Q Consensus 141 GgG~G~~~~~l~~~~---p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~---~p----~~D~v~~ 197 (228)
=||+|..+..++++. ++.++++++. +.-.+......+++++.+|+.++ +. ++|+|+.
T Consensus 6 tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih 73 (345)
T 2bll_A 6 LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP 73 (345)
T ss_dssp ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred ECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence 366777777776643 4678999887 33333322356899999999762 21 3677764
No 409
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=45.18 E-value=23 Score=25.61 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=33.9
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.|+..|...++++|..| +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 55 q~~vL~~L~~~~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~ 122 (166)
T 3deu_A 55 HWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLI 122 (166)
T ss_dssp HHHHHHHHHHSCSSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC--------CEEEECGGGHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHCCCHhhHHHHHHHHHHCCCEEeeCCCCCCCeeEEEECHHHHHHH
Confidence 5566777766335677776 88999999999987521 1233577888887554
No 410
>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=45.08 E-value=17 Score=24.96 Aligned_cols=51 Identities=8% Similarity=0.079 Sum_probs=34.2
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 40 ~~~iL~~l~~~-~~~t~~ela~~l~~~~~tvs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 106 (140)
T 2nnn_A 40 QWAALVRLGET-GPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAEL 106 (140)
T ss_dssp HHHHHHHHHHH-SSBCHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCCCeeeeEECHhHHHHH
Confidence 45567777654 4777776 89999999999986310 0112477888877544
No 411
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=44.94 E-value=21 Score=29.28 Aligned_cols=62 Identities=18% Similarity=0.317 Sum_probs=40.0
Q ss_pred CeEEEecCCCcHHHHHHHHHC---CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCC-CC--CC----CceEeee
Q 038208 135 GSLVDVGGGNGSFSRIISEAF---PGIKCTVLDL-PHVVANLPETDNLKYIAGDMF-QF--VP----PADAFLF 197 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~---p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~-~~--~p----~~D~v~~ 197 (228)
.+||=. ||+|..+..++++. ++.++++++. +.-........+++++.+|+. .+ +. ++|+|+.
T Consensus 25 ~~vlVt-GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih 97 (372)
T 3slg_A 25 KKVLIL-GVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILP 97 (372)
T ss_dssp CEEEEE-SCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred CEEEEE-CCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence 466644 56777777766654 5678999997 333222222478999999998 42 22 3687764
No 412
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=44.37 E-value=12 Score=24.16 Aligned_cols=55 Identities=20% Similarity=0.230 Sum_probs=39.3
Q ss_pred HHHHHHHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeeccc--CCCCCeEeCChhch
Q 038208 8 MSLKCAIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKV--NGQEEAYGLTASST 63 (228)
Q Consensus 8 ~~L~~a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~--~~~~~~~~~t~~~~ 63 (228)
.+|..-.++.|+..|... +++|..| .|+.|...|++++... +.....|.+|+.+.
T Consensus 11 ~~l~~~~~~~iL~~L~~~-~~~~~~ela~~l~is~~tvs~~l~~L~~~gli~~~~~~~~~r~~~~~lt~~g~ 81 (100)
T 1ub9_A 11 HILGNPVRLGIMIFLLPR-RKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGM 81 (100)
T ss_dssp HHHHSHHHHHHHHHHHHH-SEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHH
T ss_pred cccCChHHHHHHHHHHhc-CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecCCCcceEEEEECHHHH
Confidence 466667788899988754 5788777 8899999999986431 01234588888764
No 413
>1yyv_A Putative transcriptional regulator; reductive methylation, D lysine, structural genomics, PSI; HET: MLY; 2.35A {Salmonella typhimurium} SCOP: a.4.5.69
Probab=44.36 E-value=20 Score=25.09 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=23.6
Q ss_pred HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
.|+.|...|++++.... ...-.|++|+.++.+.
T Consensus 69 ~L~~Le~~GlV~r~~~~~d~r~~~y~LT~~G~~l~ 103 (131)
T 1yyv_A 69 SLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVS 103 (131)
T ss_dssp HHHHHHHHTCEEEEEECSSSCEEEEEECHHHHHHH
T ss_pred HHHHHHHCCcEEEEecCCCCCeEEEEECccHHHHH
Confidence 88999999999986521 0122599999887544
No 414
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=44.33 E-value=35 Score=27.77 Aligned_cols=59 Identities=12% Similarity=0.087 Sum_probs=40.9
Q ss_pred CeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCCceEeeeh
Q 038208 135 GSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-------VPPADAFLFK 198 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-------~p~~D~v~~~ 198 (228)
.+++=+|+ |..+..+++.. .+. ++++|. |+.++ ++ ...+.++.||..++ ..++|.+++.
T Consensus 116 ~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~-~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 116 RHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VL-RSGANFVHGDPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH-HTTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred CCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH-hCCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence 46777775 77777777754 234 888898 66666 44 36789999998763 2358887764
No 415
>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A
Probab=44.32 E-value=20 Score=24.75 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=33.0
Q ss_pred HHHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCChh
Q 038208 13 AIELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTAS 61 (228)
Q Consensus 13 a~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~~ 61 (228)
-.++.|+..|.. ++.++.| .|+.|...|++..... ++.-.|++++.
T Consensus 46 ~~rl~IL~~L~~--~~~s~~ela~~lgis~stvs~~L~~Le~~Glv~~~~~-gr~~~y~l~~~ 105 (122)
T 1r1t_A 46 PNRLRLLSLLAR--SELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQ-GRHVYYQLQDH 105 (122)
T ss_dssp HHHHHHHHHHTT--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEE-TTEEEEEESSH
T ss_pred HHHHHHHHHHHc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEe-CCEEEEEEChH
Confidence 357889999975 6888887 7899999999987652 11124666653
No 416
>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus} SCOP: a.4.5.0
Probab=44.29 E-value=23 Score=24.30 Aligned_cols=52 Identities=19% Similarity=0.221 Sum_probs=35.5
Q ss_pred HcChhhHhhhCC-CCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHG-RAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~-~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|...+ +++|..| +++-|...|++++.... .+.-.+.+|+.++.+.
T Consensus 33 ~~~vL~~l~~~~~~~~t~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~D~R~~~~~LT~~G~~~~ 101 (139)
T 3eco_A 33 QGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLV 101 (139)
T ss_dssp HHHHHHHHHHSTTTCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCC--CCEEEEECHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCCCCCCCeeeeEECHHHHHHH
Confidence 455677776653 4777776 89999999999986421 1233477888877554
No 417
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=44.25 E-value=17 Score=31.54 Aligned_cols=60 Identities=17% Similarity=0.254 Sum_probs=42.4
Q ss_pred eEEEecCCCcHHHHHHHHHCC--CCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCCceEeee
Q 038208 136 SLVDVGGGNGSFSRIISEAFP--GIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-------VPPADAFLF 197 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~p--~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-------~p~~D~v~~ 197 (228)
+|+= ||.|..+..+++..- +..++++|. ++.++.+...-.+..+.||..++ ...+|+++.
T Consensus 5 ~iiI--~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 5 KIII--LGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEE--ECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred EEEE--ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 4555 455678888888763 456999998 77777665444688899999873 234888765
No 418
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=44.05 E-value=19 Score=24.65 Aligned_cols=51 Identities=20% Similarity=0.207 Sum_probs=34.0
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..| +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 31 ~~~iL~~l~~~-~~~~~~ela~~l~~s~~tvs~~l~~L~~~glv~~~~~~~d~R~~~~~lT~~G~~~~ 97 (138)
T 3bpv_A 31 QVACLLRIHRE-PGIKQDELATFFHVDKGTIARTLRRLEESGFIEREQDPENRRRYILEVTRRGEEII 97 (138)
T ss_dssp HHHHHHHHHHS-TTCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHTH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCCCCceeEEeeECHhHHHHH
Confidence 45566777665 5777776 89999999999985410 0112377888776544
No 419
>2fa5_A Transcriptional regulator MARR/EMRR family; multiple antibiotics resistance repressor, XCC structural genomics, X-RAY diffraction; 1.80A {Xanthomonas campestris}
Probab=44.01 E-value=21 Score=25.36 Aligned_cols=51 Identities=14% Similarity=0.201 Sum_probs=33.4
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.|+..|... +++|..| +++.|...|++++.... .+...+.+|+.++.+.
T Consensus 51 ~~~iL~~l~~~-~~~t~~ela~~l~is~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 117 (162)
T 2fa5_A 51 EWRVITILALY-PGSSASEVSDRTAMDKVAVSRAVARLLERGFIRRETHGDDRRRSMLALSPAGRQVY 117 (162)
T ss_dssp HHHHHHHHHHS-TTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC---------CCCEECHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeecCCCCCCeeEEEECHHHHHHH
Confidence 45577777765 5788776 89999999999986411 1224477888777544
No 420
>3bro_A Transcriptional regulator; helix_TURN_helix, multiple antibiotic resistance protein (MA structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.04A {Oenococcus oeni} SCOP: a.4.5.28
Probab=43.31 E-value=26 Score=23.99 Aligned_cols=52 Identities=12% Similarity=0.203 Sum_probs=34.0
Q ss_pred HcChhhHhhhCCC-CcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGR-AITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~-p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|...++ ++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 36 ~~~iL~~l~~~~~~~~~~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~i~lT~~G~~~~ 104 (141)
T 3bro_A 36 QMTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLE 104 (141)
T ss_dssp HHHHHHHHHHTTTSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHTTH
T ss_pred HHHHHHHHHHCCCCCcCHHHHHHHHCCCcchHHHHHHHHHHCCCEEeeCCCcCCCeeeeEECHHHHHHH
Confidence 4556677766532 677777 89999999999886421 1222467787776443
No 421
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=43.22 E-value=10 Score=28.30 Aligned_cols=48 Identities=21% Similarity=0.163 Sum_probs=34.4
Q ss_pred EEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCC--CCeEEEeCCC
Q 038208 138 VDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPET--DNLKYIAGDM 185 (228)
Q Consensus 138 lDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~--~rv~~~~gD~ 185 (228)
-=+.||||.=..-.+.++|++++.++--+.....+++. .+|-.+.+.+
T Consensus 81 GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~~aR~hNnANVL~lG~Rv 130 (169)
T 3ph3_A 81 GIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERV 130 (169)
T ss_dssp EEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 34569999988888999999998777667777666663 3454444444
No 422
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=42.62 E-value=30 Score=21.67 Aligned_cols=31 Identities=19% Similarity=0.328 Sum_probs=23.7
Q ss_pred cChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeec
Q 038208 16 LSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKT 47 (228)
Q Consensus 16 lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~ 47 (228)
..|++.|... +++|..| .|+.|...|++++.
T Consensus 3 ~~Il~~L~~~-~~~s~~eLa~~lgvs~~tv~r~L~~L~~~GlI~~~ 47 (81)
T 2htj_A 3 NEILEFLNRH-NGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRS 47 (81)
T ss_dssp HHHHHHHHHS-CCCCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEe
Confidence 3466777665 5788777 88999999999864
No 423
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=42.40 E-value=40 Score=29.29 Aligned_cols=88 Identities=18% Similarity=0.206 Sum_probs=51.8
Q ss_pred CeEEEecCCCc-H-HHHHHHHHCCCCeEEEeec-hHHHhcCCCC------C------------CeEEEeCCCCCCCCCce
Q 038208 135 GSLVDVGGGNG-S-FSRIISEAFPGIKCTVLDL-PHVVANLPET------D------------NLKYIAGDMFQFVPPAD 193 (228)
Q Consensus 135 ~~vlDvGgG~G-~-~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~------~------------rv~~~~gD~~~~~p~~D 193 (228)
.+|.=||+|.= . ++..+++..++.+++++|+ ++.++.+++. + ++++ ..|..+...++|
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~~~aD 88 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAIAEAD 88 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHHHCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHhhcCC
Confidence 47888998853 3 4556777767789999998 7666655431 1 2221 112111123478
Q ss_pred Eeeehh--hhcC--------CChhHHHHHHHHHHHHhccC
Q 038208 194 AFLFKL--VFHG--------LGDEDGLKILKKRREAIASN 223 (228)
Q Consensus 194 ~v~~~~--vlh~--------~~d~~~~~il~~~~~aL~pg 223 (228)
+|++.- -.+. ..-.....+++.+.+.|+||
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g 128 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGP 128 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSC
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCC
Confidence 887762 2221 11124567788888888876
No 424
>2h09_A Transcriptional regulator MNTR; transcription regulator, diphtheria toxin, manganese transport, structural genomics, NPPSFA; 2.10A {Escherichia coli}
Probab=42.30 E-value=39 Score=23.87 Aligned_cols=29 Identities=21% Similarity=0.160 Sum_probs=23.6
Q ss_pred HHHHHHhCCceeecccCCCCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~ 66 (228)
.++.|...|++++.. +..+.+|+.+..+.
T Consensus 74 ~l~~Le~~Glv~r~~----~~~~~lT~~g~~~~ 102 (155)
T 2h09_A 74 MLKRLATMGLIEMIP----WRGVFLTAEGEKLA 102 (155)
T ss_dssp HHHHHHHTTCEEEET----TTEEEECHHHHHHH
T ss_pred HHHHHHHCCCEEEec----CCceEEChhHHHHH
Confidence 889999999999876 56788998877544
No 425
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=41.69 E-value=33 Score=23.67 Aligned_cols=28 Identities=21% Similarity=0.197 Sum_probs=23.2
Q ss_pred HHHHHHhCCceeecccCCCCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~ 66 (228)
.++.|...|++++.. ..|.+|+.+..+.
T Consensus 51 ~l~~Le~~Gli~r~~-----~~~~Lt~~g~~~~ 78 (139)
T 2x4h_A 51 EVSHLEEKGLVKKKE-----DGVWITNNGTRSI 78 (139)
T ss_dssp HHHHHHHTTSEEEET-----TEEEECHHHHHHH
T ss_pred HHHHHHHCCCEEecC-----CeEEEChhHHHHH
Confidence 889999999999873 6799999877543
No 426
>2pex_A Transcriptional regulator OHRR; transcription regulator; 1.90A {Xanthomonas campestris} PDB: 2pfb_A
Probab=41.64 E-value=25 Score=24.66 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=33.7
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.|+..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 49 ~~~iL~~l~~~-~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 115 (153)
T 2pex_A 49 QYLVMLVLWET-DERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTRAASDERQVIIALTETGRALR 115 (153)
T ss_dssp HHHHHHHHHHS-CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHGG
T ss_pred HHHHHHHHHhC-CCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCCcccCCeeEeeECHHHHHHH
Confidence 45566677665 4677766 88999999999986421 1222577888877554
No 427
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=41.52 E-value=24 Score=24.12 Aligned_cols=51 Identities=20% Similarity=0.260 Sum_probs=33.6
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 36 ~~~iL~~l~~~-~~~~~~~la~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~ 102 (138)
T 1jgs_A 36 QFKVLCSIRCA-ACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAIC 102 (138)
T ss_dssp HHHHHHHHHHH-SSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCHHHHHHHHCCChHHHHHHHHHHHHCCCEEecCCcccCceeEeEEChhHHHHH
Confidence 44556666654 4667666 89999999999986421 1222478888887544
No 428
>3cjn_A Transcriptional regulator, MARR family; silicibacter pomeroy structural genomics, PSI-2, protein structure initiative; 1.95A {Silicibacter pomeroyi dss-3}
Probab=41.13 E-value=22 Score=25.26 Aligned_cols=51 Identities=10% Similarity=0.146 Sum_probs=35.4
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.|+..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 54 ~~~iL~~l~~~-~~~t~~ela~~l~is~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~ 120 (162)
T 3cjn_A 54 KMRALAILSAK-DGLPIGTLGIFAVVEQSTLSRALDGLQADGLVRREVDSDDQRSSRVYLTPAGRAVY 120 (162)
T ss_dssp HHHHHHHHHHS-CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC--CCSSEEEEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHCCChhHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 55677777765 4777776 89999999999986421 1223478888877544
No 429
>2k4b_A Transcriptional regulator; DNA binding protein, winged helix; NMR {Lactococcus lactis subsp}
Probab=40.93 E-value=10 Score=25.43 Aligned_cols=15 Identities=27% Similarity=0.359 Sum_probs=13.7
Q ss_pred HHHHHHhCCceeecc
Q 038208 34 LMRLLVHSGCFNKTK 48 (228)
Q Consensus 34 ll~~L~~~g~l~~~~ 48 (228)
+|+-|+..|++++..
T Consensus 73 ~L~rLe~KGlV~R~~ 87 (99)
T 2k4b_A 73 LLGRLVKKEMLSTEK 87 (99)
T ss_dssp HHHHHHHTTSCEEEE
T ss_pred HHHHHHHCCCEEEEe
Confidence 899999999999876
No 430
>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcript regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A 4gxo_A
Probab=40.84 E-value=18 Score=25.08 Aligned_cols=51 Identities=12% Similarity=0.169 Sum_probs=34.0
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..| +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 38 q~~vL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 104 (140)
T 3hsr_A 38 GYIVLMAIEND-EKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIK 104 (140)
T ss_dssp HHHHHHHSCTT-CEEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHTH
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHCCChhhHHHHHHHHHHCCCeEecCCCCCcceeeeeEChHHHHHH
Confidence 45566666654 5777776 89999999999987421 1233578888887544
No 431
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=40.70 E-value=11 Score=27.11 Aligned_cols=16 Identities=19% Similarity=0.407 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhccCCC
Q 038208 210 LKILKKRREAIASNGE 225 (228)
Q Consensus 210 ~~il~~~~~aL~pgG~ 225 (228)
+.++..++++|||||+
T Consensus 78 r~li~~l~~aLkpgG~ 93 (136)
T 2km1_A 78 KKLISVLADSLKPNGS 93 (136)
T ss_dssp HHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHHhCCCCE
Confidence 6899999999999975
No 432
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=40.66 E-value=18 Score=25.59 Aligned_cols=52 Identities=12% Similarity=0.158 Sum_probs=33.1
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|....+++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 49 ~~~iL~~L~~~~~~~~~~ela~~l~i~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~ 116 (160)
T 3boq_A 49 KFDAMAQLARNPDGLSMGKLSGALKVTNGNVSGLVNRLIKDGMVVKAMSADDRRSFSAKLTDAGLTTF 116 (160)
T ss_dssp HHHHHHHHHHCTTCEEHHHHHHHCSSCCSCHHHHHHHHHHHTSEEEC--------CEEEECHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeecCCCCCCeEEEEEChhHHHHH
Confidence 5567777732225777776 89999999999986421 1222377888877544
No 433
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=40.66 E-value=14 Score=27.86 Aligned_cols=48 Identities=15% Similarity=0.153 Sum_probs=34.3
Q ss_pred EEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCC--CCeEEEeCCC
Q 038208 138 VDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPET--DNLKYIAGDM 185 (228)
Q Consensus 138 lDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~--~rv~~~~gD~ 185 (228)
-=+.||||.=..-.+.++|++++.++--+.....+++. .+|-.+.+-+
T Consensus 85 GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~Rv 134 (179)
T 3k7p_A 85 GVLAAGSGIGMSIAANKVPGVRAALCHDHYTAAMSRIHNDANIVCVGERT 134 (179)
T ss_dssp EEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEEccCcHHHhhHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 33569999988888999999998777667777666663 3454444444
No 434
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=40.49 E-value=29 Score=29.48 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=24.2
Q ss_pred eEEEecCCCcHHHH--HHHHHCCCCeEEEeec
Q 038208 136 SLVDVGGGNGSFSR--IISEAFPGIKCTVLDL 165 (228)
Q Consensus 136 ~vlDvGgG~G~~~~--~l~~~~p~~~~~~~Dl 165 (228)
+|+=||+|.+.+.. .+++..++.+++++|-
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~ 33 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEK 33 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 68889999987655 4667788899999874
No 435
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=40.34 E-value=31 Score=23.63 Aligned_cols=51 Identities=16% Similarity=0.118 Sum_probs=36.2
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ .++.|...|++++.... .+.-.|.+|+.++.+.
T Consensus 33 ~~~iL~~l~~~-~~~~~~ela~~l~is~~~vs~~l~~L~~~gli~~~~~~~d~r~~~~~lT~~G~~~~ 99 (142)
T 3bdd_A 33 RYSILQTLLKD-APLHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQAREAL 99 (142)
T ss_dssp HHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 45577777665 4777776 89999999999887521 1233588898887655
No 436
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=40.24 E-value=8.1 Score=28.23 Aligned_cols=50 Identities=18% Similarity=0.134 Sum_probs=35.5
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC--CCCeEEEeCCC
Q 038208 136 SLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE--TDNLKYIAGDM 185 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~--~~rv~~~~gD~ 185 (228)
..-=+.||||.=..-.+.++|++++..+--+.....+++ ..+|-.+.+-+
T Consensus 60 d~GIliCGTGiG~siaANKv~GIRAal~~d~~sA~~ar~hNnaNVl~lG~rv 111 (149)
T 2vvr_A 60 DGGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQNNDTNVLAFGSRV 111 (149)
T ss_dssp SEEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHHHCCCEEEEETTT
T ss_pred ceEEEEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEECccc
Confidence 334457999998888999999999877766776666665 44555554443
No 437
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=40.01 E-value=10 Score=29.44 Aligned_cols=48 Identities=21% Similarity=0.234 Sum_probs=34.5
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC--CCCeEEEeC
Q 038208 136 SLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE--TDNLKYIAG 183 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~--~~rv~~~~g 183 (228)
..-=+.||||.=..-.+.++|++++..+--+.....+++ ..+|-.+.+
T Consensus 68 d~GIliCGTGiG~siaANKv~GIRAAlc~d~~sA~laR~hNnANVL~lG~ 117 (214)
T 3ono_A 68 DFVVTGCGTGQGALMSCNLHPGVVCGYCLEPSDAFLFNQINNGNAISLAF 117 (214)
T ss_dssp SEEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHHTCCSEEEEES
T ss_pred CEEEEEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHHcCCcEEEecC
Confidence 334467999998888999999999877766776666665 344544443
No 438
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=39.98 E-value=8.9 Score=29.81 Aligned_cols=51 Identities=22% Similarity=0.242 Sum_probs=35.7
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC--CCCeEEEeC
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE--TDNLKYIAG 183 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~--~~rv~~~~g 183 (228)
+....-=+.||||.=..-.+.++|++++..+--+.....+++ ..+|-.+.+
T Consensus 66 g~~d~GIliCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~ 118 (216)
T 2ppw_A 66 KAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPY 118 (216)
T ss_dssp TSCSEEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHHTCCSEEEEES
T ss_pred CCCCeEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhcCceEEEeCC
Confidence 333344567999998888999999999877766776666665 334444444
No 439
>2jhp_A VP4 core protein; viral protein, viral capping enzyme, virion PR viral protein; HET: SAH GUN; 2.5A {Bluetongue virus 10} PDB: 2jh8_A* 2jha_A* 2jhc_A* 2jh9_A*
Probab=39.88 E-value=24 Score=31.20 Aligned_cols=44 Identities=18% Similarity=0.149 Sum_probs=33.5
Q ss_pred HHHHHHhhhhhccCCCeEEEecCCCcHHHHHHHHHCCC----CeEEEee
Q 038208 120 SFVVKAECKQIFEGLGSLVDVGGGNGSFSRIISEAFPG----IKCTVLD 164 (228)
Q Consensus 120 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~----~~~~~~D 164 (228)
..++. .+|...-+...|.=||||.|..+..++++-|. ++-+++|
T Consensus 177 EKLVS-MLDY~iysad~v~YVG~GdlRTl~~Fa~rd~~RF~Ri~W~~~D 224 (644)
T 2jhp_A 177 EKLVS-MLDYIVYSAEEVHYIGCGDLRTLMQFKKRSPGRFRRVLWHVYD 224 (644)
T ss_dssp CHHHH-HHHHHCSSCSEEEEETCTTSHHHHHHHHHCHHHHHTSEEEEEC
T ss_pred hhHHH-HHHhhhccccEEEEeccCCcHHHHHHHhhChhhhhceEEEEec
Confidence 34556 66644456779999999999999999998664 5667777
No 440
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=39.87 E-value=10 Score=29.70 Aligned_cols=48 Identities=23% Similarity=0.295 Sum_probs=34.4
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC--CCCeEEEeC
Q 038208 136 SLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE--TDNLKYIAG 183 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~--~~rv~~~~g 183 (228)
..-=+.||||.=..-.+.++|++++..+--+.....+++ ..+|-.+.+
T Consensus 85 d~GIliCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lGa 134 (231)
T 3c5y_A 85 DFVVTGCGTGMGSMLAANAMPGVFCGLVIDPTDAFLFGQINDGNAISMPY 134 (231)
T ss_dssp SEEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHHTCCSEEEEES
T ss_pred CeEEEEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhcCccEEEECC
Confidence 344467999998888999999999877766776666665 334444443
No 441
>3r0a_A Putative transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.31A {Methanosarcina mazei}
Probab=39.85 E-value=19 Score=24.84 Aligned_cols=35 Identities=9% Similarity=0.149 Sum_probs=27.8
Q ss_pred HHcChhhHhhhCCCC-cCHHH--------------HHHHHHhCCceeecc
Q 038208 14 IELSIADIIHCHGRA-ITLSE--------------LMRLLVHSGCFNKTK 48 (228)
Q Consensus 14 ~~lglfd~L~~~~~p-~t~~e--------------ll~~L~~~g~l~~~~ 48 (228)
.+..|+..|...++| +|+.| .|+.|...|++.+..
T Consensus 27 ~e~~il~~L~~~~~~~~t~~eLa~~l~~s~sTV~r~L~~L~~~GlV~r~~ 76 (123)
T 3r0a_A 27 ADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEKEILQRSQ 76 (123)
T ss_dssp HHHHHHHHHHHSTTCCEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeeC
Confidence 466688888876556 88888 889999999998763
No 442
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=39.16 E-value=30 Score=22.37 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=23.2
Q ss_pred HHHHHHhCCceeecccCCCCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~ 66 (228)
+++.|...|++++... .+...|.+|+.++.+.
T Consensus 46 ~l~~Le~~gli~r~~~-~r~~~~~LT~~G~~~~ 77 (99)
T 1tbx_A 46 AKKFLIQEGFVKERQE-RGEKRLYLTEKGKLFA 77 (99)
T ss_dssp HHHHHHHTTSEEEEEE-TTEEEEEECHHHHHHH
T ss_pred HHHHHHHCCCEEEEec-CCceEEEECHHHHHHH
Confidence 8999999999998542 0234678888877544
No 443
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=38.98 E-value=44 Score=26.92 Aligned_cols=65 Identities=15% Similarity=0.141 Sum_probs=39.2
Q ss_pred CCeEEEecCCCcHHHHHHHHHC--CCCeEEEeech-----HHHhcCCCC------CCeEEEeCCCCCC------CCCceE
Q 038208 134 LGSLVDVGGGNGSFSRIISEAF--PGIKCTVLDLP-----HVVANLPET------DNLKYIAGDMFQF------VPPADA 194 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dlp-----~~i~~a~~~------~rv~~~~gD~~~~------~p~~D~ 194 (228)
..+||=. ||+|..+..++++. .+.++++++.. ..++..... .+++++.+|+.++ +.++|+
T Consensus 25 ~~~vlVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 25 PKTWLIT-GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp CCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCeEEEE-CCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 4566655 56677776666643 34678888861 122211111 7899999999762 235788
Q ss_pred eeehh
Q 038208 195 FLFKL 199 (228)
Q Consensus 195 v~~~~ 199 (228)
|+..-
T Consensus 104 Vih~A 108 (351)
T 3ruf_A 104 VLHQA 108 (351)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 76443
No 444
>2qww_A Transcriptional regulator, MARR family; YP_013417.1, multiple antibiotic-resistance repressor (MARR) structural genomics; HET: MSE; 2.07A {Listeria monocytogenes str}
Probab=38.85 E-value=35 Score=23.83 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=34.9
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceee--cccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNK--TKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~--~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ +++.|...|++++ .... .+.-.+.+|+.++.+.
T Consensus 43 ~~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~~~d~R~~~~~LT~~G~~~~ 111 (154)
T 2qww_A 43 QLAMINVIYST-PGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLS 111 (154)
T ss_dssp HHHHHHHHHHS-TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEESCC--CTTCTTCEEEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCcCCCCCCceeEeEECHHHHHHH
Confidence 55667777765 4777776 8999999999998 4311 1223588888887544
No 445
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=38.81 E-value=19 Score=29.42 Aligned_cols=51 Identities=20% Similarity=0.225 Sum_probs=34.5
Q ss_pred CCCeEEEeCCCCC---CCC--CceEeeehhhhcC-----CCh-------hHHHHHHHHHHHHhccCCC
Q 038208 175 TDNLKYIAGDMFQ---FVP--PADAFLFKLVFHG-----LGD-------EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 175 ~~rv~~~~gD~~~---~~p--~~D~v~~~~vlh~-----~~d-------~~~~~il~~~~~aL~pgG~ 225 (228)
.++..++++|..+ .++ .+|+|++.=.... |.+ +....+|+.+++.|+|||+
T Consensus 12 ~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~ 79 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGS 79 (323)
T ss_dssp CSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred cCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcE
Confidence 4678888898765 344 3899887643321 211 2457789999999999974
No 446
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=38.70 E-value=43 Score=25.31 Aligned_cols=66 Identities=15% Similarity=0.152 Sum_probs=39.6
Q ss_pred CCeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCe-EEEeCCCCCC----CCCceEeeehhhh
Q 038208 134 LGSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNL-KYIAGDMFQF----VPPADAFLFKLVF 201 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv-~~~~gD~~~~----~p~~D~v~~~~vl 201 (228)
..+||=. ||+|..+..++++. .+.++++++. ++-.+... ..++ +++.+|+.+. +.+.|+++..--.
T Consensus 21 ~~~ilVt-GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 21 GMRVLVV-GANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp CCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred CCeEEEE-CCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence 3466655 45666666666543 3568888887 43332221 2478 9999998732 3357888755443
No 447
>2rdp_A Putative transcriptional regulator MARR; PFAM PF01047, winged-helix binding motif, structural genomics, PSI-2; 2.30A {Geobacillus stearothermophilus}
Probab=38.56 E-value=30 Score=24.04 Aligned_cols=51 Identities=12% Similarity=0.158 Sum_probs=33.5
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 44 ~~~iL~~l~~~-~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~ 110 (150)
T 2rdp_A 44 QFVALQWLLEE-GDLTVGELSNKMYLACSTTTDLVDRMERNGLVARVRDEHDRRVVRIRLLEKGERII 110 (150)
T ss_dssp HHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCC---CEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCCCchhHHHHHHHHHHCCCeeecCCCCCcceeEeEECHhHHHHH
Confidence 44566666654 4677776 89999999999886421 1223477888877544
No 448
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=38.41 E-value=41 Score=23.13 Aligned_cols=51 Identities=8% Similarity=0.057 Sum_probs=35.5
Q ss_pred HHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 14 IELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 14 ~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
.++.++..|. . +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 38 ~~~~iL~~l~-~-~~~~~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~r~~~~~lT~~G~~~~ 104 (146)
T 2gxg_A 38 LDFLVLRATS-D-GPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETF 104 (146)
T ss_dssp HHHHHHHHHT-T-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHh-c-CCcCHHHHHHHhCCCchhHHHHHHHHHHCCCEEeecCCCCCceEEEEECHHHHHHH
Confidence 3556677777 4 6888877 89999999999976421 1223477888877544
No 449
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28
Probab=38.38 E-value=27 Score=24.08 Aligned_cols=51 Identities=8% Similarity=-0.001 Sum_probs=34.3
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 31 ~~~iL~~l~~~-~~~t~~~la~~l~~s~~~vs~~l~~Le~~gli~r~~~~~d~R~~~~~lT~~G~~~~ 97 (144)
T 1lj9_A 31 QYLYLVRVCEN-PGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVY 97 (144)
T ss_dssp HHHHHHHHHHS-TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHC-cCcCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeecCCCCCceeeeEEChhHHHHH
Confidence 34466666665 4677666 89999999999986421 1223478888887544
No 450
>2fsw_A PG_0823 protein; alpha-beta structure, helix-turn-helix, winged-helix-turn-HE structural genomics, PSI, protein structure initiative; HET: MSE; 2.16A {Porphyromonas gingivalis} SCOP: a.4.5.69
Probab=38.34 E-value=22 Score=23.74 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=23.5
Q ss_pred HHHHHHhCCceeecccCC--CCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVNG--QEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~~--~~~~~~~t~~~~~l~ 66 (228)
.|+.|...|++++..... ..-.|.+|+.++.+.
T Consensus 59 ~L~~Le~~GlV~r~~~~~d~r~~~y~LT~~G~~l~ 93 (107)
T 2fsw_A 59 ELKFLCGKGLIKKKQYPEVPPRVEYSLTPLGEKVL 93 (107)
T ss_dssp HHHHHHHTTSEEEEEECSSSCEEEEEECHHHHTTH
T ss_pred HHHHHHHCCCEEEeecCCCCCeeEEEECccHHHHH
Confidence 899999999999865210 123599999876543
No 451
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=38.12 E-value=16 Score=27.65 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=33.7
Q ss_pred EecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCCC--CCeEEEeCCC
Q 038208 139 DVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPET--DNLKYIAGDM 185 (228)
Q Consensus 139 DvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~~--~rv~~~~gD~ 185 (228)
=+-||||.=..-.+.++|++++.++--+.....+++. .+|-.+.+-+
T Consensus 94 IliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~Rv 142 (184)
T 3sgw_A 94 LMICGTGLGVAISANKVPGIRAVTAHDTFSVERAILSNDAQVLCFGQRV 142 (184)
T ss_dssp EEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEcCCcHHHhhhhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchhh
Confidence 3569999888888999999998777667777666663 3454444444
No 452
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=38.05 E-value=1.1e+02 Score=24.07 Aligned_cols=84 Identities=19% Similarity=0.262 Sum_probs=45.8
Q ss_pred eEEEecCCCcHHHHHHHHHC--CCCeEEEeech-HHHhcCCCCCCeEEEeCCCCCC------CCCceEeeehhhhcCC-C
Q 038208 136 SLVDVGGGNGSFSRIISEAF--PGIKCTVLDLP-HVVANLPETDNLKYIAGDMFQF------VPPADAFLFKLVFHGL-G 205 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dlp-~~i~~a~~~~rv~~~~gD~~~~------~p~~D~v~~~~vlh~~-~ 205 (228)
+||=. ||+|..+..++++. .+.++++++.. ...+ ..+++++.+|+. + +.++|+|+..-..... .
T Consensus 4 ~vlVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~ 77 (311)
T 3m2p_A 4 KIAVT-GGTGFLGQYVVESIKNDGNTPIILTRSIGNKA----INDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQG 77 (311)
T ss_dssp EEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSS
T ss_pred EEEEE-CCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc----CCceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCC
Confidence 45543 56777777666654 24578888874 2221 238999999986 3 2357887644332221 1
Q ss_pred h----hHHHHHHHHHHHHhccCCC
Q 038208 206 D----EDGLKILKKRREAIASNGE 225 (228)
Q Consensus 206 d----~~~~~il~~~~~aL~pgG~ 225 (228)
. +......+++.++++..|+
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~ 101 (311)
T 3m2p_A 78 KISEFHDNEILTQNLYDACYENNI 101 (311)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 1233445666666655443
No 453
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=37.97 E-value=33 Score=27.49 Aligned_cols=62 Identities=13% Similarity=0.229 Sum_probs=37.2
Q ss_pred eEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC------CCCceEeeehh
Q 038208 136 SLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF------VPPADAFLFKL 199 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~------~p~~D~v~~~~ 199 (228)
+||=. ||+|..+..++++. .+.++++++. +.-.+... ..+++++.+|+.++ +.++|+|+..-
T Consensus 15 ~ilVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a 85 (342)
T 2x4g_A 15 KYAVL-GATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPECRVAEMLDHAGLERALRGLDGVIFSA 85 (342)
T ss_dssp EEEEE-STTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCEEEECCTTCHHHHHHHTTTCSEEEEC-
T ss_pred EEEEE-CCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 56655 56677777666543 2467888887 32221111 23789999999762 33578776543
No 454
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=37.85 E-value=36 Score=27.11 Aligned_cols=83 Identities=12% Similarity=0.060 Sum_probs=48.3
Q ss_pred CeEEEecCCC-cH-HHHHHHHHC-CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCCCceEeeehhhhcCCChhHHH
Q 038208 135 GSLVDVGGGN-GS-FSRIISEAF-PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQFVPPADAFLFKLVFHGLGDEDGL 210 (228)
Q Consensus 135 ~~vlDvGgG~-G~-~~~~l~~~~-p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~~p~~D~v~~~~vlh~~~d~~~~ 210 (228)
.+|.=||||. |. ++..+++.. +..++++.|. ++..+.+.+.-.++.. .|..+...++|+|++.- ++....
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~-~~~~~~~~~aDvVilav-----~p~~~~ 77 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT-QDNRQGALNADVVVLAV-----KPHQIK 77 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE-SCHHHHHSSCSEEEECS-----CGGGHH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe-CChHHHHhcCCeEEEEe-----CHHHHH
Confidence 4677788863 22 333444442 2337899998 5555544332244432 22222234689988765 556677
Q ss_pred HHHHHHHHH-hccC
Q 038208 211 KILKKRREA-IASN 223 (228)
Q Consensus 211 ~il~~~~~a-L~pg 223 (228)
.+++++... ++++
T Consensus 78 ~vl~~l~~~~l~~~ 91 (280)
T 3tri_A 78 MVCEELKDILSETK 91 (280)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHhhccCCC
Confidence 888888887 7664
No 455
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=37.78 E-value=42 Score=22.99 Aligned_cols=51 Identities=20% Similarity=0.178 Sum_probs=34.1
Q ss_pred HcChhhHh-hhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADII-HCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L-~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..| ... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 39 ~~~iL~~l~~~~-~~~t~~~la~~l~~s~~~vs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 106 (146)
T 2fbh_A 39 RWLVLLHLARHR-DSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLI 106 (146)
T ss_dssp HHHHHHHHHHCS-SCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEECTTHHHHH
T ss_pred HHHHHHHHHHcC-CCCCHHHHHHHhCCChhhHHHHHHHHHHCCCeeecCCCcccCeeeeEECHhHHHHH
Confidence 44566777 433 5777777 89999999999986421 1223477888777544
No 456
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=37.75 E-value=23 Score=29.66 Aligned_cols=93 Identities=15% Similarity=0.098 Sum_probs=54.3
Q ss_pred ccCCCeEEEecCCC-cHHHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEe---CCC-CCC----CC--CceEeeeh
Q 038208 131 FEGLGSLVDVGGGN-GSFSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIA---GDM-FQF----VP--PADAFLFK 198 (228)
Q Consensus 131 ~~~~~~vlDvGgG~-G~~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~---gD~-~~~----~p--~~D~v~~~ 198 (228)
+....+||-+|+|. |.++..+++..--.++++.|. ++-.+.+++.. ...+. .|+ .+. .+ ++|+++-.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~ 261 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG-FETIDLRNSAPLRDQIDQILGKPEVDCGVDA 261 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT-CEEEETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC-CcEEcCCCcchHHHHHHHHhCCCCCCEEEEC
Confidence 45678999999876 889999999763338999997 66555555421 12222 122 111 11 48888644
Q ss_pred hhhcCC-C-h----hHHHHHHHHHHHHhccCC
Q 038208 199 LVFHGL-G-D----EDGLKILKKRREAIASNG 224 (228)
Q Consensus 199 ~vlh~~-~-d----~~~~~il~~~~~aL~pgG 224 (228)
---... . + ......++.+.+.|+|||
T Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG 293 (398)
T 2dph_A 262 VGFEAHGLGDEANTETPNGALNSLFDVVRAGG 293 (398)
T ss_dssp SCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEE
T ss_pred CCCccccccccccccccHHHHHHHHHHHhcCC
Confidence 321100 0 0 001235788889999986
No 457
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=37.72 E-value=17 Score=26.22 Aligned_cols=34 Identities=15% Similarity=0.341 Sum_probs=24.3
Q ss_pred HcChhhHhhhCC-CCcCHHH-------------------HHHHHHhCCceeecc
Q 038208 15 ELSIADIIHCHG-RAITLSE-------------------LMRLLVHSGCFNKTK 48 (228)
Q Consensus 15 ~lglfd~L~~~~-~p~t~~e-------------------ll~~L~~~g~l~~~~ 48 (228)
+.-|++.|...+ ++.|++| .|+.|+..|++.+..
T Consensus 19 R~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~ 72 (150)
T 2w57_A 19 RLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHH 72 (150)
T ss_dssp HHHHHHHHTSGGGSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCcEEEEE
Confidence 445667776544 4677766 788999999998764
No 458
>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=37.71 E-value=19 Score=25.32 Aligned_cols=51 Identities=16% Similarity=0.205 Sum_probs=33.1
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.|+..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 39 ~~~iL~~l~~~-~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 105 (155)
T 1s3j_A 39 QLFVLASLKKH-GSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKF 105 (155)
T ss_dssp HHHHHHHHHHH-SEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeecCCCCCCceEEEEECHHHHHHH
Confidence 34456666654 4666665 89999999999986421 1222477888777544
No 459
>1z7u_A Hypothetical protein EF0647; winged-helix-turn-helix, MARR, structural genomics, PSI, Pro structure initiative; 2.20A {Enterococcus faecalis} SCOP: a.4.5.69
Probab=37.66 E-value=26 Score=23.59 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=23.3
Q ss_pred HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
.|+.|...|++++.... ...-.|.+|+.++.+.
T Consensus 56 ~L~~Le~~GlI~r~~~~~d~r~~~~~LT~~G~~~~ 90 (112)
T 1z7u_A 56 RLREMEKDGLVHRESFNELPPRVEYTLTPEGYALY 90 (112)
T ss_dssp HHHHHHHHTSEEEEEECCSSCEEEEEECHHHHHHH
T ss_pred HHHHHHHCCCEEEeecCCCCCeEEEEECHhHHHHH
Confidence 88999999999987521 1122488999877443
No 460
>2eth_A Transcriptional regulator, putative, MAR family; MARR family, structural genomics, joint center for structura genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: a.4.5.28
Probab=37.64 E-value=32 Score=24.16 Aligned_cols=52 Identities=13% Similarity=0.044 Sum_probs=35.0
Q ss_pred HHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 14 IELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 14 ~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
.++.|+..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 45 ~~~~iL~~l~~~-~~~t~~ela~~l~is~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~ 112 (154)
T 2eth_A 45 TELYAFLYVALF-GPKKMKEIAEFLSTTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTEKGKEIF 112 (154)
T ss_dssp HHHHHHHHHHHH-CCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCcceeEEEECHHHHHHH
Confidence 355566677654 4677666 89999999999986421 1223477888877544
No 461
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=37.62 E-value=15 Score=32.11 Aligned_cols=85 Identities=13% Similarity=0.132 Sum_probs=58.3
Q ss_pred cCCCeEEEecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC------CCCeEEEeCCCCCCCCCceEeeehhhhcCCC
Q 038208 132 EGLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE------TDNLKYIAGDMFQFVPPADAFLFKLVFHGLG 205 (228)
Q Consensus 132 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~------~~rv~~~~gD~~~~~p~~D~v~~~~vlh~~~ 205 (228)
-+.++|.-||+|+=..+.++.-+-.++.+++==.+.......+ .+..++. ++.+-.+.+|+|++- .|
T Consensus 35 lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~--~~~eA~~~ADvV~~L-----~P 107 (491)
T 3ulk_A 35 LQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVG--TYEELIPQADLVINL-----TP 107 (491)
T ss_dssp GTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEE--EHHHHGGGCSEEEEC-----SC
T ss_pred HcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEec--CHHHHHHhCCEEEEe-----CC
Confidence 3568999999999988888887777887655444544322111 2344332 333335568998753 68
Q ss_pred hhHHHHHHHHHHHHhccC
Q 038208 206 DEDGLKILKKRREAIASN 223 (228)
Q Consensus 206 d~~~~~il~~~~~aL~pg 223 (228)
|+....+.+.+...|+||
T Consensus 108 D~~q~~vy~~I~p~lk~G 125 (491)
T 3ulk_A 108 DKQHSDVVRTVQPLMKDG 125 (491)
T ss_dssp GGGHHHHHHHHGGGSCTT
T ss_pred hhhHHHHHHHHHhhCCCC
Confidence 888888999999999997
No 462
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=37.51 E-value=45 Score=29.35 Aligned_cols=73 Identities=18% Similarity=0.229 Sum_probs=47.7
Q ss_pred CeEEEecCCCcHHHHHHHHHCC--CCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC-------CCCceEeeehhhhcCC
Q 038208 135 GSLVDVGGGNGSFSRIISEAFP--GIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF-------VPPADAFLFKLVFHGL 204 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~p--~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~-------~p~~D~v~~~~vlh~~ 204 (228)
..++=+|+ |.++..+++..- +..++++|. ++.++.+++...+.++.||..++ ...+|.++.. -
T Consensus 128 ~hviI~G~--g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t-----~ 200 (565)
T 4gx0_A 128 GHILIFGI--DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIAN-----L 200 (565)
T ss_dssp SCEEEESC--CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEEC-----S
T ss_pred CeEEEECC--ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEe-----C
Confidence 45666554 567777777653 467999998 77776665433789999999773 1248887751 3
Q ss_pred ChhHHHHHHH
Q 038208 205 GDEDGLKILK 214 (228)
Q Consensus 205 ~d~~~~~il~ 214 (228)
+|+.+..+..
T Consensus 201 ~D~~n~~~~~ 210 (565)
T 4gx0_A 201 SDPDNANLCL 210 (565)
T ss_dssp CHHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 5555444433
No 463
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=37.49 E-value=28 Score=24.67 Aligned_cols=50 Identities=14% Similarity=0.080 Sum_probs=34.3
Q ss_pred cChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 16 LSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 16 lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
+.++..|... +++|..| +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 53 ~~vL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~ 118 (159)
T 3s2w_A 53 FPFLMRLYRE-DGINQESLSDYLKIDKGTTARAIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLE 118 (159)
T ss_dssp HHHHHHHHHS-CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECC---CCEEEEECHHHHHHH
T ss_pred HHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCCCCCCeeEEEECHHHHHHH
Confidence 4456666665 5777776 89999999999987521 1223577888887554
No 464
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=37.37 E-value=58 Score=23.67 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=24.9
Q ss_pred CCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCCh
Q 038208 27 RAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTA 60 (228)
Q Consensus 27 ~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~ 60 (228)
+|+|.++ +|..|...|+++-.. +..|.|.++.
T Consensus 43 ~~~s~~eIA~~~~i~~~~l~kil~~L~~aGlv~s~r--G~~GGy~Lar 88 (159)
T 3lwf_A 43 GPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIR--GAHGGYVLNG 88 (159)
T ss_dssp CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC--STTCEEEECS
T ss_pred CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCeEEEec--CCCCceEecC
Confidence 5788877 899999999998765 2356788765
No 465
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=37.23 E-value=50 Score=25.62 Aligned_cols=81 Identities=19% Similarity=0.328 Sum_probs=45.0
Q ss_pred CeEEEecCCC-cH-HHHHHHHHCCCCe-EEEeec-hHHHhcCCCCCCeEEEeCCCCCCCCCceEeeehhhhcCCChhHHH
Q 038208 135 GSLVDVGGGN-GS-FSRIISEAFPGIK-CTVLDL-PHVVANLPETDNLKYIAGDMFQFVPPADAFLFKLVFHGLGDEDGL 210 (228)
Q Consensus 135 ~~vlDvGgG~-G~-~~~~l~~~~p~~~-~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~~p~~D~v~~~~vlh~~~d~~~~ 210 (228)
.+|.=||+|. |. ++..+.+. +.+ ++++|. ++..+.+.+.-++.. ..|..+...++|+|++.- ++....
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~Dvvi~av-----~~~~~~ 82 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQKVEAEY-TTDLAEVNPYAKLYIVSL-----KDSAFA 82 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHHTTCEE-ESCGGGSCSCCSEEEECC-----CHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCce-eCCHHHHhcCCCEEEEec-----CHHHHH
Confidence 3688888863 33 33344444 345 788887 555443322113332 233333344689888753 444456
Q ss_pred HHHHHHHHHhccC
Q 038208 211 KILKKRREAIASN 223 (228)
Q Consensus 211 ~il~~~~~aL~pg 223 (228)
.+++.+...++||
T Consensus 83 ~v~~~l~~~~~~~ 95 (266)
T 3d1l_A 83 ELLQGIVEGKREE 95 (266)
T ss_dssp HHHHHHHTTCCTT
T ss_pred HHHHHHHhhcCCC
Confidence 7777777767665
No 466
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=37.06 E-value=20 Score=22.47 Aligned_cols=15 Identities=27% Similarity=0.565 Sum_probs=13.5
Q ss_pred HHHHHHhCCceeecc
Q 038208 34 LMRLLVHSGCFNKTK 48 (228)
Q Consensus 34 ll~~L~~~g~l~~~~ 48 (228)
+|+-|...|++++..
T Consensus 47 ~l~rL~~kGlv~r~~ 61 (82)
T 1p6r_A 47 MLLRLIKKGALNHHK 61 (82)
T ss_dssp HHHHHHHTTSEEEEE
T ss_pred HHHHHHHCCCeEEEe
Confidence 889999999999875
No 467
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=36.80 E-value=31 Score=21.77 Aligned_cols=46 Identities=20% Similarity=0.311 Sum_probs=32.7
Q ss_pred HHHcChhhHhhhCC--CCcCHHH--------------HHHHHHhCCceeecccCCCCCeEeCCh
Q 038208 13 AIELSIADIIHCHG--RAITLSE--------------LMRLLVHSGCFNKTKVNGQEEAYGLTA 60 (228)
Q Consensus 13 a~~lglfd~L~~~~--~p~t~~e--------------ll~~L~~~g~l~~~~~~~~~~~~~~t~ 60 (228)
-.+..|++.|..++ .++|+.| .|+-|...|+++..+ ++++.|..++
T Consensus 14 ~~~~~IL~~L~~~~~~~~~t~~eLA~~Lgvs~~tV~~~L~~L~~~G~I~~~g--~~~~~W~i~~ 75 (77)
T 1qgp_A 14 DQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEA--GTPPLWKIAV 75 (77)
T ss_dssp HHHHHHHHHHHHHCSSSCEEHHHHHHHHCCCHHHHHHHHHHHHHHTSEEEEC--SSSCEEEECC
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecC--CCCCceEecC
Confidence 34667888887762 2688877 788999999998874 2346676554
No 468
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=36.56 E-value=29 Score=29.65 Aligned_cols=64 Identities=14% Similarity=0.206 Sum_probs=39.2
Q ss_pred CeEEEecCCCcHHHHHH----HHHC---CCCeEEEeec-hHHHhcCCC------CCCeEEEe-CCCCCCCCCceEeeehh
Q 038208 135 GSLVDVGGGNGSFSRII----SEAF---PGIKCTVLDL-PHVVANLPE------TDNLKYIA-GDMFQFVPPADAFLFKL 199 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l----~~~~---p~~~~~~~Dl-p~~i~~a~~------~~rv~~~~-gD~~~~~p~~D~v~~~~ 199 (228)
.+|.=||+|+. ++..+ +.+. |.-+++++|+ ++.++.+.. ...+++.. .|..+.+.++|+|+..-
T Consensus 3 ~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Viita 81 (417)
T 1up7_A 3 MRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF 81 (417)
T ss_dssp CEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred CEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEEcC
Confidence 47888999997 66654 5533 3457999999 543322110 11255554 46544567899997655
No 469
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=36.08 E-value=29 Score=27.99 Aligned_cols=31 Identities=23% Similarity=0.497 Sum_probs=25.5
Q ss_pred CeEEEecCCCcHHHHH--HHHHCCCCeEEEeec
Q 038208 135 GSLVDVGGGNGSFSRI--ISEAFPGIKCTVLDL 165 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~--l~~~~p~~~~~~~Dl 165 (228)
.-|+=||+|++.++.+ ++++.++++++++|-
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk 98 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 4589999999888776 555678999999985
No 470
>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28
Probab=36.03 E-value=28 Score=23.98 Aligned_cols=51 Identities=12% Similarity=0.216 Sum_probs=32.9
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ .++.|...|++++.... .+.-.+.+|+.+..+.
T Consensus 39 ~~~iL~~l~~~-~~~~~~ela~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~ 105 (142)
T 2bv6_A 39 QFLVLTILWDE-SPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIR 105 (142)
T ss_dssp HHHHHHHHHHS-SEEEHHHHHHHTTCCTTTHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeecCCCCcceEEEEEChHHHHHH
Confidence 44556666654 3566555 89999999999886521 1222577888877544
No 471
>3hrs_A Metalloregulator SCAR; DTXR/MNTR family member, transcription; 2.70A {Streptococcus gordonii} PDB: 3hrt_A 3hru_A
Probab=35.92 E-value=40 Score=25.71 Aligned_cols=29 Identities=28% Similarity=0.340 Sum_probs=25.3
Q ss_pred HHHHHHhCCceeecccCCCCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVNGQEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~~~~~~~~~t~~~~~l~ 66 (228)
+++-|...|++++.. +..+.+|+.++.+.
T Consensus 40 ~l~~Le~~GlV~r~~----~~~i~LT~~G~~~~ 68 (214)
T 3hrs_A 40 MMKKLLAEELLIKDK----KAGYLLTDLGLKLV 68 (214)
T ss_dssp HHHHHHHTTSEEEET----TTEEEECHHHHHHH
T ss_pred HHHHHHHCCCEEEec----CCCeEECHHHHHHH
Confidence 899999999999987 67899999887554
No 472
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=35.86 E-value=62 Score=25.27 Aligned_cols=80 Identities=14% Similarity=0.062 Sum_probs=43.0
Q ss_pred eEEEecCCC-cH-HHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCCCceEeeehhhhcCCChhHHHHH
Q 038208 136 SLVDVGGGN-GS-FSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQFVPPADAFLFKLVFHGLGDEDGLKI 212 (228)
Q Consensus 136 ~vlDvGgG~-G~-~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~~p~~D~v~~~~vlh~~~d~~~~~i 212 (228)
+|.=||+|. |. ++..+.+. +.+++++|. ++.++.+.+..-......|..+- .++|+|++.- ++.....+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av-----~~~~~~~~ 73 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCT-----PIQLILPT 73 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECS-----CHHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEEC-----CHHHHHHH
Confidence 466678654 22 22333333 347889998 55554433211110122333223 5689887753 44456677
Q ss_pred HHHHHHHhccC
Q 038208 213 LKKRREAIASN 223 (228)
Q Consensus 213 l~~~~~aL~pg 223 (228)
++++...++|+
T Consensus 74 ~~~l~~~~~~~ 84 (279)
T 2f1k_A 74 LEKLIPHLSPT 84 (279)
T ss_dssp HHHHGGGSCTT
T ss_pred HHHHHhhCCCC
Confidence 78777777765
No 473
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=35.57 E-value=25 Score=25.01 Aligned_cols=51 Identities=14% Similarity=0.198 Sum_probs=34.6
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..| +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 55 q~~vL~~l~~~-~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~DrR~~~~~LT~~G~~~~ 121 (161)
T 3e6m_A 55 KLRLLSSLSAY-GELTVGQLATLGVMEQSTTSRTVDQLVDEGLAARSISDADQRKRTVVLTRKGKKKL 121 (161)
T ss_dssp HHHHHHHHHHH-SEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC---CCCSCEEEECHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCcccCCeeEeeECHHHHHHH
Confidence 44566667654 4677666 89999999999987521 1234578888887554
No 474
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=35.46 E-value=88 Score=25.02 Aligned_cols=64 Identities=19% Similarity=0.227 Sum_probs=39.4
Q ss_pred CCeEEEecCCCcHHHHHHHHHC--CCCeEEEeech--H---HHhcCCCCCCeEEEeCCCCCC-CCCceEeeeh
Q 038208 134 LGSLVDVGGGNGSFSRIISEAF--PGIKCTVLDLP--H---VVANLPETDNLKYIAGDMFQF-VPPADAFLFK 198 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dlp--~---~i~~a~~~~rv~~~~gD~~~~-~p~~D~v~~~ 198 (228)
..+||=. ||+|.++..++++. .+.++++++.. . .+.......+++++.+|+.++ +.++|+|+..
T Consensus 27 ~~~vlVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~ 98 (343)
T 2b69_A 27 RKRILIT-GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHL 98 (343)
T ss_dssp CCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEEC
T ss_pred CCEEEEE-cCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEEC
Confidence 4566655 55677777666643 24678888762 1 111111246799999999874 4567887643
No 475
>3kp7_A Transcriptional regulator TCAR; multiple drug resistance, biofilm, transcription regulation, binding, transcription regulator; 2.30A {Staphylococcus epidermidis RP62A} PDB: 3kp3_A* 3kp4_A* 3kp5_A* 3kp2_A* 3kp6_A
Probab=35.36 E-value=26 Score=24.53 Aligned_cols=50 Identities=10% Similarity=0.173 Sum_probs=32.8
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeec---ccC-CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKT---KVN-GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~---~~~-~~~~~~~~t~~~~~l~ 66 (228)
++.++..| .. +++|..| +++.|...|++++. .+. .+.-.+.+|+.++.+.
T Consensus 40 q~~iL~~l-~~-~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~~~D~R~~~~~lT~~G~~~~ 107 (151)
T 3kp7_A 40 QSHVLNML-SI-EALTVGQITEKQGVNKAAVSRRVKKLLNAELVKLEKPDSNTDQRLKIIKLSNKGKKYI 107 (151)
T ss_dssp HHHHHHHH-HH-SCBCHHHHHHHHCSCSSHHHHHHHHHHHTTSEEC-----------CCBEECHHHHHHH
T ss_pred HHHHHHHH-Hc-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCCCCCeeEEEECHhHHHHH
Confidence 45577778 44 6888887 89999999999973 111 1233467888877554
No 476
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=35.02 E-value=1.4e+02 Score=25.64 Aligned_cols=84 Identities=12% Similarity=0.186 Sum_probs=48.3
Q ss_pred CCeEEEecCCC-cH-HHHHHHHHCCCCeEEEeec-hHHHhcCCC---------------------CCCeEEEeCCCCCCC
Q 038208 134 LGSLVDVGGGN-GS-FSRIISEAFPGIKCTVLDL-PHVVANLPE---------------------TDNLKYIAGDMFQFV 189 (228)
Q Consensus 134 ~~~vlDvGgG~-G~-~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~---------------------~~rv~~~~gD~~~~~ 189 (228)
..+|.-||+|. |. ++..+++ -+.+++++|. ++.++.+.+ ....++ ..|. +..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~--~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~~ 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR--VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KEL 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HHH
Confidence 45788999876 32 3333333 3578999998 554443210 111222 4454 345
Q ss_pred CCceEeeehhhhcCCChhHHHHHHHHHHHHhccCC
Q 038208 190 PPADAFLFKLVFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 190 p~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
.++|+|+..-. -..+....+++++...++|+-
T Consensus 113 ~~aDlVIeaVp---e~~~~k~~v~~~l~~~~~~~~ 144 (463)
T 1zcj_A 113 STVDLVVEAVF---EDMNLKKKVFAELSALCKPGA 144 (463)
T ss_dssp TTCSEEEECCC---SCHHHHHHHHHHHHHHSCTTC
T ss_pred CCCCEEEEcCC---CCHHHHHHHHHHHHhhCCCCe
Confidence 56899887542 111234678888888888763
No 477
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=34.98 E-value=43 Score=27.45 Aligned_cols=86 Identities=12% Similarity=0.062 Sum_probs=46.5
Q ss_pred CeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHH--hcCCCCCCeEEEeCC-CCCC------CCCceEeeehhhhc
Q 038208 135 GSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVV--ANLPETDNLKYIAGD-MFQF------VPPADAFLFKLVFH 202 (228)
Q Consensus 135 ~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i--~~a~~~~rv~~~~gD-~~~~------~p~~D~v~~~~vlh 202 (228)
.+|+= =|++|..+..+++.. .+.++++++. +.-. .......+++++.+| +.++ +.++|+++.....
T Consensus 6 ~~ilV-tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~- 83 (352)
T 1xgk_A 6 KTIAV-VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS- 83 (352)
T ss_dssp CCEEE-ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS-
T ss_pred CEEEE-ECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC-
Confidence 34553 466777777766643 3456777776 2211 111113579999999 7652 2357887744322
Q ss_pred CCChhHHHHHHHHHHHHhccCC
Q 038208 203 GLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 203 ~~~d~~~~~il~~~~~aL~pgG 224 (228)
+........ +++.++++..|
T Consensus 84 -~~~~~~~~~-~~l~~aa~~~g 103 (352)
T 1xgk_A 84 -QAGDEIAIG-KDLADAAKRAG 103 (352)
T ss_dssp -TTSCHHHHH-HHHHHHHHHHS
T ss_pred -CCcHHHHHH-HHHHHHHHHcC
Confidence 212222222 66666665544
No 478
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=34.87 E-value=24 Score=26.24 Aligned_cols=30 Identities=17% Similarity=0.253 Sum_probs=23.3
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCeEEEeec
Q 038208 136 SLVDVGGGNGSFSRIISEAFPGIKCTVLDL 165 (228)
Q Consensus 136 ~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl 165 (228)
-|+=||+|...++.++.-+--+++++++|-
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 388899999887776554444889999995
No 479
>2fbi_A Probable transcriptional regulator; MARR, APC5816, structural genomic protein structure initiative; 2.10A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=34.80 E-value=21 Score=24.54 Aligned_cols=51 Identities=12% Similarity=0.143 Sum_probs=32.8
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|... +++|..+ +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 38 ~~~iL~~l~~~-~~~t~~ela~~l~~s~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 104 (142)
T 2fbi_A 38 QWRVIRILRQQ-GEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCF 104 (142)
T ss_dssp HHHHHHHHHHH-CSEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeecCCCCCCeeEEEECHHHHHHH
Confidence 45566666654 4666666 89999999999876410 0112377888776544
No 480
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=34.35 E-value=1.1e+02 Score=21.94 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=36.9
Q ss_pred CCeEEEecCCCcHHHHHHHHHC--C-CCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC--------CCCceEeeeh
Q 038208 134 LGSLVDVGGGNGSFSRIISEAF--P-GIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF--------VPPADAFLFK 198 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~--p-~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~--------~p~~D~v~~~ 198 (228)
..+|+=+|+| ..+..+++.. . +.+++++|. ++.++.+++ ..+..+.+|..++ ..++|+++..
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEEC
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEe
Confidence 4578888864 4444444322 2 467899998 665555442 3466777887541 2357887763
No 481
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=33.89 E-value=10 Score=27.64 Aligned_cols=47 Identities=13% Similarity=0.075 Sum_probs=33.2
Q ss_pred EecCCCcHHHHHHHHHCCCCeEEEeechHHHhcCCC--CCCeEEEeCCC
Q 038208 139 DVGGGNGSFSRIISEAFPGIKCTVLDLPHVVANLPE--TDNLKYIAGDM 185 (228)
Q Consensus 139 DvGgG~G~~~~~l~~~~p~~~~~~~Dlp~~i~~a~~--~~rv~~~~gD~ 185 (228)
=+.||||.=..-.+.++|++++..+--+.....+++ ..+|-.+.+-+
T Consensus 68 IliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnANVL~lG~rv 116 (148)
T 4em8_A 68 VLICGTGIGMSIAANRHKNIRAALCSSTMLAKLSREHNDANVLCFGSRY 116 (148)
T ss_dssp EEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHHHCCCEEEEETTT
T ss_pred EEEccCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchhh
Confidence 356999998888899999999877766766666665 34444444433
No 482
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=33.56 E-value=25 Score=24.68 Aligned_cols=52 Identities=13% Similarity=0.149 Sum_probs=34.0
Q ss_pred HHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 14 IELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 14 ~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
.++.++..|... +++|..| +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 42 ~q~~iL~~l~~~-~~~~~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 109 (149)
T 4hbl_A 42 SQYLVMLTLWEE-NPQTLNSIGRHLDLSSNTLTPMLKRLEQSGWVKRERQQSDKRQLIITLTDNGQQQQ 109 (149)
T ss_dssp HHHHHHHHHHHS-SSEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEC---------CEEEECSHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeCCCCCCcceeeeeECHHHHHHH
Confidence 355667777665 5777776 89999999999986421 1233588898887554
No 483
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=33.08 E-value=31 Score=24.76 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=34.5
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.|+..|... +++|..| +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 47 ~~~iL~~L~~~-~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~ 113 (168)
T 2nyx_A 47 QFRTLVILSNH-GPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVV 113 (168)
T ss_dssp HHHHHHHHHHH-CSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCSSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHHHHHHH
Confidence 45566777664 4777776 89999999999886421 1223477888877544
No 484
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=33.06 E-value=30 Score=21.95 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=23.3
Q ss_pred hhhHhhhC-----CCCcCHHH--------------HHHHHHhCCceeecc
Q 038208 18 IADIIHCH-----GRAITLSE--------------LMRLLVHSGCFNKTK 48 (228)
Q Consensus 18 lfd~L~~~-----~~p~t~~e--------------ll~~L~~~g~l~~~~ 48 (228)
|++.|... |+|.|+.| =|..|...|++.+..
T Consensus 9 IL~~I~~~i~~~~g~~psv~EIa~~lgvS~~TVrr~L~~Le~kG~I~R~~ 58 (77)
T 2jt1_A 9 IISIVQERQNMDDGAPVKTRDIADAAGLSIYQVRLYLEQLHDVGVLEKVN 58 (77)
T ss_dssp HHHHHHHHHHHHTTSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEES
T ss_pred HHHHHHHHHhhccCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEecC
Confidence 45555554 46777777 689999999999885
No 485
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=32.60 E-value=31 Score=26.86 Aligned_cols=80 Identities=13% Similarity=0.176 Sum_probs=42.9
Q ss_pred cCCCcHHHHHHHHHC----CCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCC------CCCceEeeehhhhcCCChhHH
Q 038208 141 GGGNGSFSRIISEAF----PGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQF------VPPADAFLFKLVFHGLGDEDG 209 (228)
Q Consensus 141 GgG~G~~~~~l~~~~----p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~------~p~~D~v~~~~vlh~~~d~~~ 209 (228)
=||+|..+..++++. ++.++++++. +.-.+... ..+++++.+|+.++ +.++|+++..-... . +..
T Consensus 5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~-~--~~~ 80 (286)
T 2zcu_A 5 TGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDEAALTSALQGVEKLLLISSSE-V--GQR 80 (286)
T ss_dssp ESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCHHHHHHHTTTCSEEEECC----------
T ss_pred EcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCC-c--hHH
Confidence 367788888777654 2467888887 22111100 24788999999762 33578776443321 1 122
Q ss_pred HHHHHHHHHHhccCC
Q 038208 210 LKILKKRREAIASNG 224 (228)
Q Consensus 210 ~~il~~~~~aL~pgG 224 (228)
....+++.++++..|
T Consensus 81 ~~~~~~l~~a~~~~~ 95 (286)
T 2zcu_A 81 APQHRNVINAAKAAG 95 (286)
T ss_dssp -CHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcC
Confidence 334555555554433
No 486
>3u2r_A Regulatory protein MARR; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, helix-turn-helix; 2.20A {Planctomyces limnophilus}
Probab=32.51 E-value=26 Score=25.12 Aligned_cols=52 Identities=13% Similarity=0.167 Sum_probs=33.1
Q ss_pred HcChhhHhhhC-CCCcCHHH--------------HHHHHHhCCceeecccCC--CCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCH-GRAITLSE--------------LMRLLVHSGCFNKTKVNG--QEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~-~~p~t~~e--------------ll~~L~~~g~l~~~~~~~--~~~~~~~t~~~~~l~ 66 (228)
++.++..|... ++++|..+ +++.|...|++++..... +.-.+.+|+.++.+.
T Consensus 48 q~~vL~~l~~~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~ 116 (168)
T 3u2r_A 48 QYNTLRLLRSVHPEGMATLQIADRLISRAPDITRLIDRLDDRGLVLRTRKPENRRVVEVALTDAGLKLL 116 (168)
T ss_dssp HHHHHHHHHHHTTSCEEHHHHHHHC---CTHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEeecCCCCCCCeeEeEECHHHHHHH
Confidence 45556666653 14677666 899999999999764210 111467888777544
No 487
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=32.47 E-value=39 Score=21.47 Aligned_cols=29 Identities=10% Similarity=0.242 Sum_probs=23.9
Q ss_pred hhhHhhhCCCCcCHHH--------------HHHHHHhCCceeec
Q 038208 18 IADIIHCHGRAITLSE--------------LMRLLVHSGCFNKT 47 (228)
Q Consensus 18 lfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~ 47 (228)
|.+.|... +.+++.| .|+.|...|++.+.
T Consensus 7 Il~~L~~~-g~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~l~R~ 49 (78)
T 1xn7_A 7 VRDLLALR-GRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRI 49 (78)
T ss_dssp HHHHHHHS-CSBCHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHc-CCCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEe
Confidence 56777766 5888887 78999999999988
No 488
>3f3x_A Transcriptional regulator, MARR family, putative; DNA binding protein, DNA-binding, transcription regulation; 1.90A {Sulfolobus solfataricus}
Probab=32.43 E-value=29 Score=24.05 Aligned_cols=50 Identities=10% Similarity=0.096 Sum_probs=33.4
Q ss_pred HcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccCC--CCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVNG--QEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~~--~~~~~~~t~~~~~l~ 66 (228)
++.++..|...+ + |..+ +++.|...|++++..... +.-.+.+|+.++.+.
T Consensus 39 ~~~iL~~l~~~~-~-~~~~la~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 104 (144)
T 3f3x_A 39 DFSILKATSEEP-R-SMVYLANRYFVTQSAITAAVDKLEAKGLVRRIRDSKDRRIVIVEITPKGRQVL 104 (144)
T ss_dssp HHHHHHHHHHSC-E-EHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHCC-C-CHHHHHHHHCCChhHHHHHHHHHHHCCCEEeccCCCCCceEEEEECHHHHHHH
Confidence 456667776653 3 6665 899999999999875200 111488999887554
No 489
>3tgn_A ADC operon repressor ADCR; helix-turn-helix, transcriptional regulator, transcription; 2.00A {Streptococcus pneumoniae}
Probab=32.28 E-value=46 Score=22.90 Aligned_cols=51 Identities=22% Similarity=0.250 Sum_probs=31.8
Q ss_pred HHcChhhHhhhCCCCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 14 IELSIADIIHCHGRAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 14 ~~lglfd~L~~~~~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
.++.|+..|... ++|..| +++.|...|++++.... .+.-.+.+|+.+..+.
T Consensus 39 ~~~~iL~~l~~~--~~t~~eLa~~l~~s~~tvs~~l~~L~~~Glv~r~~~~~d~R~~~~~lT~~g~~~~ 105 (146)
T 3tgn_A 39 TQEHILMLLSEE--SLTNSELARRLNVSQAAVTKAIKSLVKEGMLETSKDSKDARVIFYQLTDLARPIA 105 (146)
T ss_dssp HHHHHHHHHTTC--CCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC----------CCEECGGGHHHH
T ss_pred HHHHHHHHHHhC--CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCeEeccCCCCCceeEEEECHhHHHHH
Confidence 456677777764 377777 89999999999886421 1233577787776444
No 490
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=32.12 E-value=39 Score=28.08 Aligned_cols=89 Identities=17% Similarity=0.080 Sum_probs=51.3
Q ss_pred CCCeEEEec--CCCcHHHHHHHHHCCCC------eEEEeechHHHhcCC----------CCC-CeEEEeCCCCCCCCCce
Q 038208 133 GLGSLVDVG--GGNGSFSRIISEAFPGI------KCTVLDLPHVVANLP----------ETD-NLKYIAGDMFQFVPPAD 193 (228)
Q Consensus 133 ~~~~vlDvG--gG~G~~~~~l~~~~p~~------~~~~~Dlp~~i~~a~----------~~~-rv~~~~gD~~~~~p~~D 193 (228)
...+|.=+| |+.|..+..++...+-+ .+.++|+++..+.++ -.. .-.....|..+.+.++|
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~ad 102 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVA 102 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCCC
Confidence 345888899 57788777766665532 689999864332211 111 11223334333567789
Q ss_pred EeeehhhhcCCCh-------hHHHHHHHHHHHHhc
Q 038208 194 AFLFKLVFHGLGD-------EDGLKILKKRREAIA 221 (228)
Q Consensus 194 ~v~~~~vlh~~~d-------~~~~~il~~~~~aL~ 221 (228)
++++.--.-.-|- ..+..|++.+.+.++
T Consensus 103 vVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~ 137 (345)
T 4h7p_A 103 IAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIA 137 (345)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHH
Confidence 9987654433332 234566777766664
No 491
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=32.08 E-value=47 Score=26.85 Aligned_cols=62 Identities=13% Similarity=0.125 Sum_probs=33.8
Q ss_pred eEEEecCCC-cHHHHHHHHHCCCCeEE-Eeec-hHHHhcCCCCCCeEEEeCCCCC--CCCCceEeeehh
Q 038208 136 SLVDVGGGN-GSFSRIISEAFPGIKCT-VLDL-PHVVANLPETDNLKYIAGDMFQ--FVPPADAFLFKL 199 (228)
Q Consensus 136 ~vlDvGgG~-G~~~~~l~~~~p~~~~~-~~Dl-p~~i~~a~~~~rv~~~~gD~~~--~~p~~D~v~~~~ 199 (228)
+|.=||||. |......+.+.|+.+++ ++|. ++..+...+.-.+. ..|+.+ .-++.|+|++..
T Consensus 5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~D~V~i~t 71 (331)
T 4hkt_A 5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE--VRTIDAIEAAADIDAVVICT 71 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE--ECCHHHHHHCTTCCEEEECS
T ss_pred EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC--cCCHHHHhcCCCCCEEEEeC
Confidence 677789875 44444445567888876 5787 54443322222333 334333 134577776543
No 492
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=31.98 E-value=41 Score=27.69 Aligned_cols=30 Identities=13% Similarity=0.265 Sum_probs=24.0
Q ss_pred eEEEecCCCcHHHH--HHHHHCCCCeEEEeec
Q 038208 136 SLVDVGGGNGSFSR--IISEAFPGIKCTVLDL 165 (228)
Q Consensus 136 ~vlDvGgG~G~~~~--~l~~~~p~~~~~~~Dl 165 (228)
.|+-||+|.+..+. .++++.|+.+++++|.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~ 33 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEK 33 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 58889999987655 4455668999999997
No 493
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=31.83 E-value=45 Score=26.35 Aligned_cols=79 Identities=16% Similarity=0.262 Sum_probs=44.4
Q ss_pred CeEEEecC-CC-cH-HHHHHHHHCCCCeEEEeec-hHHHhcCCCCCCeEEEeCCCCCCCCCceEeeehhhhcCCChhHHH
Q 038208 135 GSLVDVGG-GN-GS-FSRIISEAFPGIKCTVLDL-PHVVANLPETDNLKYIAGDMFQFVPPADAFLFKLVFHGLGDEDGL 210 (228)
Q Consensus 135 ~~vlDvGg-G~-G~-~~~~l~~~~p~~~~~~~Dl-p~~i~~a~~~~rv~~~~gD~~~~~p~~D~v~~~~vlh~~~d~~~~ 210 (228)
.+|.=||+ |. |. ++..+++. +.+++++|. ++.++.+.+. .+.. .+..+...++|+|++.- ++....
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~-g~~~--~~~~~~~~~aDvVi~av-----~~~~~~ 81 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGM-GIPL--TDGDGWIDEADVVVLAL-----PDNIIE 81 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHT-TCCC--CCSSGGGGTCSEEEECS-----CHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhc-CCCc--CCHHHHhcCCCEEEEcC-----CchHHH
Confidence 47888887 64 33 23333332 458899998 5554433221 1221 13222234689988653 445567
Q ss_pred HHHHHHHHHhccC
Q 038208 211 KILKKRREAIASN 223 (228)
Q Consensus 211 ~il~~~~~aL~pg 223 (228)
.+++++...++||
T Consensus 82 ~v~~~l~~~l~~~ 94 (286)
T 3c24_A 82 KVAEDIVPRVRPG 94 (286)
T ss_dssp HHHHHHGGGSCTT
T ss_pred HHHHHHHHhCCCC
Confidence 7788777777775
No 494
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=31.79 E-value=41 Score=29.09 Aligned_cols=33 Identities=21% Similarity=0.437 Sum_probs=27.4
Q ss_pred CCCeEEEecCCCcHHHHH--HHHHCCCCeEEEeec
Q 038208 133 GLGSLVDVGGGNGSFSRI--ISEAFPGIKCTVLDL 165 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~--l~~~~p~~~~~~~Dl 165 (228)
...+|+=||+|.+.+..+ +.++.++.+++++|-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~ 44 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSE 44 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 345799999999988776 777788999999986
No 495
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=31.72 E-value=35 Score=29.75 Aligned_cols=33 Identities=12% Similarity=0.163 Sum_probs=24.2
Q ss_pred CCCeEEEecCCCcHHHHHHHHHCCCCeEEEeec
Q 038208 133 GLGSLVDVGGGNGSFSRIISEAFPGIKCTVLDL 165 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl 165 (228)
+..+||=||+|.|.+..+..-+..+.+++++|-
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~ 73 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISP 73 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEES
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECC
Confidence 346899999999887654433335678999984
No 496
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=31.64 E-value=77 Score=22.32 Aligned_cols=33 Identities=18% Similarity=0.246 Sum_probs=23.8
Q ss_pred HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 34 LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 34 ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
+++-|...|++++.... .+.-...+|+.++.+.
T Consensus 66 ~v~~Le~~GlV~R~~~~~DrR~~~l~LT~~G~~~~ 100 (151)
T 4aik_A 66 TLDQLEEKGLITRHTSANDRRAKRIKLTEQSSPII 100 (151)
T ss_dssp HHHHHHHTTSEEEEECSSCTTCEEEEECGGGHHHH
T ss_pred HHHHHHhCCCeEeecCCCCCcchhhhcCHHHHHHH
Confidence 89999999999876531 1223477898887555
No 497
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=31.40 E-value=32 Score=23.91 Aligned_cols=52 Identities=10% Similarity=0.148 Sum_probs=32.1
Q ss_pred HcChhhHhhhCC-CCcCHHH--------------HHHHHHhCCceeecccC--CCCCeEeCChhchhhh
Q 038208 15 ELSIADIIHCHG-RAITLSE--------------LMRLLVHSGCFNKTKVN--GQEEAYGLTASSTLLI 66 (228)
Q Consensus 15 ~lglfd~L~~~~-~p~t~~e--------------ll~~L~~~g~l~~~~~~--~~~~~~~~t~~~~~l~ 66 (228)
++.++..|...+ +++|..| +++.|...|++++.... .+.-.+.+|+.++.+.
T Consensus 43 q~~vL~~l~~~~~~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~ 111 (148)
T 3jw4_A 43 QGRMIGYIYENQESGIIQKDLAQFFGRRGASITSMLQGLEKKGYIERRIPENNARQKNIYVLPKGAALV 111 (148)
T ss_dssp HHHHHHHHHHHTTTCCCHHHHHHC------CHHHHHHHHHHTTSBCCC--------CCCCBCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHCCChhHHHHHHHHHHHCCCEEeeCCCCCchhheeeECHHHHHHH
Confidence 445566666542 4677666 89999999999876421 1223467888777544
No 498
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=31.26 E-value=33 Score=27.27 Aligned_cols=85 Identities=18% Similarity=0.205 Sum_probs=48.1
Q ss_pred CCeEEEecCCCcHHHHHHHHHC--CCCeEEEeec-hHHHhcCCCC------------------------CCeEEEeCCCC
Q 038208 134 LGSLVDVGGGNGSFSRIISEAF--PGIKCTVLDL-PHVVANLPET------------------------DNLKYIAGDMF 186 (228)
Q Consensus 134 ~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-p~~i~~a~~~------------------------~rv~~~~gD~~ 186 (228)
..+|.=||+|. .+..+++.. -+.+++++|. ++.++.+.+. .+++. ..|..
T Consensus 4 ~~kV~VIGaG~--mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGV--LGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSH--HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 35777787764 444333321 2678999998 5555433210 12333 23332
Q ss_pred CCCCCceEeeehhhhcCCChhHHHHHHHHHHHHhccCC
Q 038208 187 QFVPPADAFLFKLVFHGLGDEDGLKILKKRREAIASNG 224 (228)
Q Consensus 187 ~~~p~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pgG 224 (228)
+...++|+|+..-.- +.+....+++++.+.++|+-
T Consensus 81 ~~~~~aDlVi~av~~---~~~~~~~v~~~l~~~~~~~~ 115 (283)
T 4e12_A 81 QAVKDADLVIEAVPE---SLDLKRDIYTKLGELAPAKT 115 (283)
T ss_dssp HHTTTCSEEEECCCS---CHHHHHHHHHHHHHHSCTTC
T ss_pred HHhccCCEEEEeccC---cHHHHHHHHHHHHhhCCCCc
Confidence 234568998765311 12355778899988888863
No 499
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=31.24 E-value=45 Score=27.88 Aligned_cols=29 Identities=7% Similarity=0.038 Sum_probs=18.1
Q ss_pred CCceEeeehhhhcCCChhHHHHHHHHHHHHhccC
Q 038208 190 PPADAFLFKLVFHGLGDEDGLKILKKRREAIASN 223 (228)
Q Consensus 190 p~~D~v~~~~vlh~~~d~~~~~il~~~~~aL~pg 223 (228)
.++|+|++.- +......+++++...++|+
T Consensus 81 ~~aD~Vilav-----~~~~~~~v~~~l~~~l~~~ 109 (404)
T 3c7a_A 81 SGADVVILTV-----PAFAHEGYFQAMAPYVQDS 109 (404)
T ss_dssp TTCSEEEECS-----CGGGHHHHHHHHTTTCCTT
T ss_pred CCCCEEEEeC-----chHHHHHHHHHHHhhCCCC
Confidence 3588887654 2233456777777766665
No 500
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=31.02 E-value=2.6e+02 Score=24.18 Aligned_cols=88 Identities=10% Similarity=0.094 Sum_probs=50.3
Q ss_pred CCCeEEEecCCCcHHH--HHHHHHCCCC-eEEEeec-hH----HHhcCCC---------------------CCCeEEEeC
Q 038208 133 GLGSLVDVGGGNGSFS--RIISEAFPGI-KCTVLDL-PH----VVANLPE---------------------TDNLKYIAG 183 (228)
Q Consensus 133 ~~~~vlDvGgG~G~~~--~~l~~~~p~~-~~~~~Dl-p~----~i~~a~~---------------------~~rv~~~~g 183 (228)
...+|.=||.|.=... ..+++ .|+. +++++|+ ++ .++..++ ..++++- .
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~-~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~t-t 94 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFAD-APCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECT-P 94 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHH-STTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEE-S
T ss_pred CCCEEEEECcCHHHHHHHHHHHH-hCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEe-C
Confidence 4568888888764433 33333 3566 8999999 66 5554432 1233332 2
Q ss_pred CCCCCCCCceEeeehhhhcC-------CChhHHHHHHHHHHHHhccC
Q 038208 184 DMFQFVPPADAFLFKLVFHG-------LGDEDGLKILKKRREAIASN 223 (228)
Q Consensus 184 D~~~~~p~~D~v~~~~vlh~-------~~d~~~~~il~~~~~aL~pg 223 (228)
| .+...++|+|++.-.-.. ..-.......+.+.+.|+||
T Consensus 95 d-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g 140 (478)
T 3g79_A 95 D-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPG 140 (478)
T ss_dssp C-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTT
T ss_pred c-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCC
Confidence 3 223445888876532211 11234566778888888886
Done!