BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038211
(605 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/236 (60%), Positives = 177/236 (75%), Gaps = 2/236 (0%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK 431
D I W DL + E+IG GS+ V+R W+GSDVAVK+ ++ + + +E+ I+K+
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKR 90
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN--YQALDIKRRLRMALDVARGM 489
LRHPN++LFMGAV L IVTE+L RGSL++ LHK+ + LD +RRL MA DVA+GM
Sbjct: 91 LRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
NYLH+RNPPIVHR+LKS NLLVDK +TVKV DFGLS LK +T+L++KS GTP+WMAPEV
Sbjct: 151 NYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV 210
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
LR EPSNEKSDV+SFGVILWEL T PW NLN QVV VGF +RLE+P L+P
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP 266
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/236 (59%), Positives = 174/236 (73%), Gaps = 2/236 (0%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK 431
D I W DL + E+IG GS+ V+R W+GSDVAVK+ ++ + + +E+ I+K+
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKR 90
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN--YQALDIKRRLRMALDVARGM 489
LRHPN++LFMGAV L IVTE+L RGSL++ LHK+ + LD +RRL MA DVA+GM
Sbjct: 91 LRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
NYLH+RNPPIVHRDLKS NLLVDK +TVKV DFGLS LK + +L +K GTP+WMAPEV
Sbjct: 151 NYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEV 210
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
LR EPSNEKSDV+SFGVILWEL T PW NLN QVV VGF +RLE+P L+P
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP 266
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 149/225 (66%), Gaps = 14/225 (6%)
Query: 377 WE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E+ +++K
Sbjct: 7 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 65
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
RH N+LLFMG +++ +L IVT++ SL+ LH + ++K+ + +A ARGM+YL
Sbjct: 66 RHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL 124
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWMAPEVL 550
H ++ I+HRDLKS+N+ + ++ TVK+GDFGL+++K+ + + G+ WMAPEV+
Sbjct: 125 HAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
Query: 551 RSEPSNE---KSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
R + SN +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 227
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 148/225 (65%), Gaps = 14/225 (6%)
Query: 377 WE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E+ +++K
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
RH N+LLFMG +++ +L IVT++ SL+ LH + ++K+ + +A ARGM+YL
Sbjct: 78 RHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWMAPEVL 550
H ++ I+HRDLKS+N+ + ++ TVK+GDFGL++ K+ + + G+ WMAPEV+
Sbjct: 137 HAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 551 RSEPSNE---KSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
R + SN +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 148/230 (64%), Gaps = 14/230 (6%)
Query: 372 DGGIRWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEID 427
D WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E+
Sbjct: 14 DAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++K RH N+LLFMG ++ +L IVT++ SL+ LH + ++K+ + +A AR
Sbjct: 73 VLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWM 545
GM+YLH ++ I+HRDLKS+N+ + ++ TVK+GDFGL++ K+ + + G+ WM
Sbjct: 132 GMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 546 APEVLRSEPSNE---KSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
APEV+R + SN +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 149/232 (64%), Gaps = 14/232 (6%)
Query: 370 ATDGGIRWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKE 425
+D WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E
Sbjct: 1 GSDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNE 59
Query: 426 IDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDV 485
+ +++K RH N+LLFMG +++ +L IVT++ SL+ LH ++ + + +A
Sbjct: 60 VGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 118
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQ 543
A+GM+YLH ++ I+HRDLKS+N+ + ++ TVK+GDFGL+++K+ + + G+
Sbjct: 119 AQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 544 WMAPEVLRSE---PSNEKSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
WMAPEV+R + P + +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 228
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 149/232 (64%), Gaps = 14/232 (6%)
Query: 370 ATDGGIRWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKE 425
+D WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E
Sbjct: 1 GSDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNE 59
Query: 426 IDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDV 485
+ +++K RH N+LLFMG +++ +L IVT++ SL+ LH ++ + + +A
Sbjct: 60 VGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 118
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQ 543
A+GM+YLH ++ I+HRDLKS+N+ + ++ TVK+GDFGL+++K+ + + G+
Sbjct: 119 AQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 544 WMAPEVLRSE---PSNEKSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
WMAPEV+R + P + +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 228
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 145/230 (63%), Gaps = 14/230 (6%)
Query: 372 DGGIRWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEID 427
D WE ++ L IG GS+ VY+G W+G DVAVK+ + + ++ E+
Sbjct: 26 DSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVA 84
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++K RH N+LLFMG + +++ L IVT++ SL+K LH + + + +A A+
Sbjct: 85 VLRKTRHVNILLFMGYM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ 143
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWM 545
GM+YLH +N I+HRD+KS+N+ + + TVK+GDFGL+++K+ + + G+ WM
Sbjct: 144 GMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWM 201
Query: 546 APEVLRSE---PSNEKSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
APEV+R + P + +SDV+S+G++L+EL+T +P++++N Q++ +VG
Sbjct: 202 APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG 251
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 147/225 (65%), Gaps = 14/225 (6%)
Query: 377 WE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E+ +++K
Sbjct: 30 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 88
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
RH N+LLFMG +++ +L IVT++ SL+ LH ++ + + +A A+GM+YL
Sbjct: 89 RHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 147
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWMAPEVL 550
H ++ I+HRDLKS+N+ + ++ TVK+GDFGL+++K+ + + G+ WMAPEV+
Sbjct: 148 HAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 551 RSE---PSNEKSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
R + P + +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 250
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 147/225 (65%), Gaps = 14/225 (6%)
Query: 377 WE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E+ +++K
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 89
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
RH N+LLFMG +++ +L IVT++ SL+ LH ++ + + +A A+GM+YL
Sbjct: 90 RHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 148
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWMAPEVL 550
H ++ I+HRDLKS+N+ + ++ TVK+GDFGL+++K+ + + G+ WMAPEV+
Sbjct: 149 HAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 551 RSE---PSNEKSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
R + P + +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 251
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 147/225 (65%), Gaps = 14/225 (6%)
Query: 377 WE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E+ +++K
Sbjct: 5 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 63
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
RH N+LLFMG +++ +L IVT++ SL+ LH ++ + + +A A+GM+YL
Sbjct: 64 RHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 122
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWMAPEVL 550
H ++ I+HRDLKS+N+ + ++ TVK+GDFGL+++K+ + + G+ WMAPEV+
Sbjct: 123 HAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
Query: 551 RSE---PSNEKSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
R + P + +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 225
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 147/225 (65%), Gaps = 14/225 (6%)
Query: 377 WE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E+ +++K
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
RH N+LLFMG +++ +L IVT++ SL+ LH ++ + + +A A+GM+YL
Sbjct: 62 RHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWMAPEVL 550
H ++ I+HRDLKS+N+ + ++ TVK+GDFGL+++K+ + + G+ WMAPEV+
Sbjct: 121 HAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 551 RSE---PSNEKSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
R + P + +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 223
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 146/225 (64%), Gaps = 14/225 (6%)
Query: 377 WE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E+ +++K
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
RH N+LLFMG ++ +L IVT++ SL+ LH ++ + + +A A+GM+YL
Sbjct: 62 RHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWMAPEVL 550
H ++ I+HRDLKS+N+ + ++ TVK+GDFGL+++K+ + + G+ WMAPEV+
Sbjct: 121 HAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 551 RSE---PSNEKSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
R + P + +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 223
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 146/225 (64%), Gaps = 14/225 (6%)
Query: 377 WE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E+ +++K
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 89
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
RH N+LLFMG +++ +L IVT++ SL+ LH ++ + + +A A+GM+YL
Sbjct: 90 RHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 148
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWMAPEVL 550
H ++ I+HRDLKS+N+ + ++ TVK+GDFGL++ K+ + + G+ WMAPEV+
Sbjct: 149 HAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 551 RSE---PSNEKSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
R + P + +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 251
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 146/225 (64%), Gaps = 14/225 (6%)
Query: 377 WE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E+ +++K
Sbjct: 23 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 81
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
RH N+LLFMG +++ +L IVT++ SL+ LH ++ + + +A A+GM+YL
Sbjct: 82 RHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 140
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWMAPEVL 550
H ++ I+HRDLKS+N+ + ++ TVK+GDFGL++ K+ + + G+ WMAPEV+
Sbjct: 141 HAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 551 RSE---PSNEKSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
R + P + +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 243
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 146/225 (64%), Gaps = 14/225 (6%)
Query: 377 WE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
WE + +G+ IG GS+ VY+G W+G DVAVK+ + L+ ++ E+ +++K
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
RH N+LLFMG +++ +L IVT++ SL+ LH ++ + + +A A+GM+YL
Sbjct: 62 RHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWMAPEVL 550
H ++ I+HRDLKS+N+ + ++ TVK+GDFGL++ K+ + + G+ WMAPEV+
Sbjct: 121 HAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 551 RSE---PSNEKSDVFSFGVILWELVTASIPWNNLNLM-QVVGVVG 591
R + P + +SDV++FG++L+EL+T +P++N+N Q++ +VG
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG 223
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 130/237 (54%), Gaps = 15/237 (6%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV--YFGSEYIEGTLKNYQKEIDIIKKL 432
I + +L L E IG+G + VYR W G +VAVK + E I T++N ++E + L
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
+HPN++ G + L +V EF G L + L DI + A+ +ARGMNYL
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI--LVNWAVQIARGMNYL 121
Query: 493 HHRN-PPIVHRDLKSSNLLVDK--------NWTVKVGDFGLSSLKNATYLTAKSGRGTPQ 543
H PI+HRDLKSSN+L+ + N +K+ DFGL+ + T T S G
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT--TKMSAAGAYA 179
Query: 544 WMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELP 600
WMAPEV+R+ ++ SDV+S+GV+LWEL+T +P+ ++ + V V L +P
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 68
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 129 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 241
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 20 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 76
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 136
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 137 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 194
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 195 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 249
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 67
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 127
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 128 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 185
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 240
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 65
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 126 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 183
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 238
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 68
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 129 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 241
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 64
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 125 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 182
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 237
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 65
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 126 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 183
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 238
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 65
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 126 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 183
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 238
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 68
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 129 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 186
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 241
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 128/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 68
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q + L MA ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 128
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 129 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 241
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 63
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 124 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 236
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 128/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 63
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q + L MA ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 124 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 236
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 128/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 63
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q + L MA ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 124 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 236
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 63
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 124 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 236
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 131/241 (54%), Gaps = 19/241 (7%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 26 KWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 82
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + IVTE++P G+L L + N + + L MA ++
Sbjct: 83 KEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSA 142
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 143 MEYLEKKN--FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 200
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVV--GFMDRRLELPEGLD 604
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ G+ R+E PEG
Sbjct: 201 ESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGY---RMEQPEGCP 257
Query: 605 P 605
P
Sbjct: 258 P 258
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 253 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 309
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 369
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HR+L + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 370 MEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 427
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 428 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 482
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 130/235 (55%), Gaps = 13/235 (5%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-YFGSEYIEGTLKNYQKEIDIIK 430
+WE D+ + ++G G Y VY G+W + V V + +E ++ + KE ++K
Sbjct: 211 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMK 268
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGM 489
+++HPN++ +G + I+TEF+ G+L L + N Q ++ L MA ++ M
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 328
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPE 548
YL +N +HR+L + N LV +N VKV DFGLS L TA +G P +W APE
Sbjct: 329 EYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 386
Query: 549 VLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 387 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 440
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 128/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 68
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+ EF+ G+L L + N Q ++ L MA ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 129 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 241
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 129/235 (54%), Gaps = 13/235 (5%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-YFGSEYIEGTLKNYQKEIDIIK 430
+WE D+ + ++G G Y VY G+W + V V + +E ++ + KE ++K
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMK 271
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGM 489
+++HPN++ +G + I+TEF+ G+L L + N Q + L MA ++ M
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 331
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPE 548
YL +N +HR+L + N LV +N VKV DFGLS L TA +G P +W APE
Sbjct: 332 EYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 389
Query: 549 VLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 443
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 128/236 (54%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 64
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+ EF+ G+L L + N Q ++ L MA ++
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 125 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 182
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 237
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 127/236 (53%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 63
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+ EF+ G+L L + N Q + L MA ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 124 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 236
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 127/236 (53%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 63
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+ EF+ G+L L + N Q + L MA ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 124 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++L QV ++ D R+E PEG
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEG 236
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 127/236 (53%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 61
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q + L MA ++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 122 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAP 179
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++ QV ++ D R+E PEG
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERPEG 234
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 127/236 (53%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G + VY G+W + V V E T++ + KE ++
Sbjct: 5 KWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 61
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+TEF+ G+L L + N Q + L MA ++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 122 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 179
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++ QV ++ D R+E PEG
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERPEG 234
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 126/236 (53%), Gaps = 15/236 (6%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK--NYQKEIDII 429
+WE D+ + ++G G Y VY G+W + V V E T++ + KE ++
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAV---KTLKEDTMEVEEFLKEAAVM 61
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARG 488
K+++HPN++ +G + I+ EF+ G+L L + N Q + L MA ++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAP 547
M YL +N +HRDL + N LV +N VKV DFGLS L TA +G P +W AP
Sbjct: 122 MEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 179
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEG 602
E L + KSDV++FGV+LWE+ T + P+ ++ QV ++ D R+E PEG
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERPEG 234
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 129/240 (53%), Gaps = 13/240 (5%)
Query: 373 GGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
GI ++ L ++ +++G W G+D+ VKV ++ +++ +E ++
Sbjct: 5 SGIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF 64
Query: 433 RHPNVLLFMGAVAS--QERLGIVTEFLPRGSLFKTLHKNYQ-ALDIKRRLRMALDVARGM 489
HPNVL +GA S ++T ++P GSL+ LH+ +D + ++ ALD+ARGM
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 124
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRG-TPQWMAPE 548
+LH P I L S ++++D++ T ++ S+ + + GR P W+APE
Sbjct: 125 AFLHTLEPLIPRHALNSRSVMIDEDMTARI------SMADVKFSFQSPGRMYAPAWVAPE 178
Query: 549 VLRSEP--SNEKS-DVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
L+ +P +N +S D++SF V+LWELVT +P+ +L+ M++ V R +P G+ P
Sbjct: 179 ALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP 238
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 136/242 (56%), Gaps = 27/242 (11%)
Query: 379 DLQLGEEIGLGSYAVVYRG--IWNGSDVAVK-VYFG-----SEYIEGTLKNYQKEIDIIK 430
+++ ++IG G + +V++G + + S VA+K + G +E IE + +Q+E+ I+
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE-KFQEFQREVFIMS 78
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMN 490
L HPN++ G + + R+ V EF+P G L+ L + +LR+ LD+A G+
Sbjct: 79 NLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 491 YLHHRNPPIVHRDLKSSNLL---VDKNWTV--KVGDFGLSSLKNATYLTAKSGRGTPQWM 545
Y+ ++NPPIVHRDL+S N+ +D+N V KV DFGLS + + G QWM
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQSVHSVSGLLGNFQWM 193
Query: 546 APEVLRSEPSN--EKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGL 603
APE + +E + EK+D +SF +IL+ ++T P++ + G + F++ E EGL
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS----YGKIKFINMIRE--EGL 247
Query: 604 DP 605
P
Sbjct: 248 RP 249
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E LQL + +G G + V+ G WNG + VA+K GT+ +++ +E I+KKL+H
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-----KPGTMSPESFLEEAQIMKKLKH 63
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLH 493
+ L+ + AV S+E + IVTE++ +GSL L +AL + + MA VA GM Y+
Sbjct: 64 -DKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N +HRDL+S+N+LV K+ DFGL+ L TA+ G P +W APE
Sbjct: 123 RMN--YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 180
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L ELVT +P+ +N +V+
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL 216
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 112/214 (52%), Gaps = 12/214 (5%)
Query: 379 DLQLGEEIGLGSYAVVYRGIW-NGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHP 435
+L +EIG G + +V+ G W N VA+K EG + +++ +E +++ KL HP
Sbjct: 9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-----REGAMSEEDFIEEAEVMMKLSHP 63
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
++ G Q + +VTEF+ G L L + L M LDV GM YL
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-- 121
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSEP 554
++HRDL + N LV +N +KV DFG++ T+ +G P +W +PEV
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 555 SNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
+ KSDV+SFGV++WE+ + IP+ N + +VV
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 215
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 120/218 (55%), Gaps = 12/218 (5%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGS-DVAVKVYFGSEYIEGTLKN--YQKEIDIIKK 431
++ E++ L +E+G G + VV G W G DVAVK+ EG++ + +E + K
Sbjct: 5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-----KEGSMSEDEFFQEAQTMMK 59
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L HP ++ F G + + + IVTE++ G L L + + L+ + L M DV GM +
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAF 119
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVL 550
L +HRDL + N LVD++ VKV DFG++ + + Y+++ + +W APEV
Sbjct: 120 LESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVF 177
Query: 551 RSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
+ KSDV++FG+++WE+ + +P++ +VV
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 116/238 (48%), Gaps = 19/238 (7%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH 434
R DL GE +G G + + + + + + E T + + KE+ +++ L H
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PNVL F+G + +RL +TE++ G+L + +R+ A D+A GM YLH
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS--------------SLKNATYLTAKSGRG 540
N I+HRDL S N LV +N V V DFGL+ SLK + G
Sbjct: 127 MN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 541 TPQWMAPEVLRSEPSNEKSDVFSFGVILWEL---VTASIPWNNLNLMQVVGVVGFMDR 595
P WMAPE++ +EK DVFSFG++L E+ V A + + + V GF+DR
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR 242
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 110/197 (55%), Gaps = 9/197 (4%)
Query: 383 GEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYI--EGTLKNYQKEIDIIKKLRHPNVLLF 440
G ++G G + VVY+G N + VAVK I E + + +EI ++ K +H N++
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
+G + + L +V ++P GSL L L R ++A A G+N+LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRSEPSN 556
+HRD+KS+N+L+D+ +T K+ DFGL+ T R GT +MAPE LR E +
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEIT- 212
Query: 557 EKSDVFSFGVILWELVT 573
KSD++SFGV+L E++T
Sbjct: 213 PKSDIYSFGVVLLEIIT 229
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 129/237 (54%), Gaps = 17/237 (7%)
Query: 374 GIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLR 433
+ ++L+L + IG G + V G + G+ VAVK + T + + E ++ +LR
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKN----DATAQAFLAEASVMTQLR 244
Query: 434 HPNVLLFMGAVASQER-LGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNY 491
H N++ +G + ++ L IVTE++ +GSL L + L L+ +LDV M Y
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR 551
L N VHRDL + N+LV ++ KV DFGL+ ++T +G+ +W APE LR
Sbjct: 305 LEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALR 359
Query: 552 SEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GFMDRRLELPEGLDP 605
+ + KSDV+SFG++LWE+ + +P+ + L VV V G+ +++ P+G P
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY---KMDAPDGCPP 413
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 135/242 (55%), Gaps = 27/242 (11%)
Query: 379 DLQLGEEIGLGSYAVVYRG--IWNGSDVAVK-VYFG-----SEYIEGTLKNYQKEIDIIK 430
+++ ++IG G + +V++G + + S VA+K + G +E IE + +Q+E+ I+
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE-KFQEFQREVFIMS 78
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMN 490
L HPN++ G + + R+ V EF+P G L+ L + +LR+ LD+A G+
Sbjct: 79 NLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 491 YLHHRNPPIVHRDLKSSNLL---VDKNWTV--KVGDFGLSSLKNATYLTAKSGRGTPQWM 545
Y+ ++NPPIVHRDL+S N+ +D+N V KV DFG S + + G QWM
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---QQSVHSVSGLLGNFQWM 193
Query: 546 APEVLRSEPSN--EKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGL 603
APE + +E + EK+D +SF +IL+ ++T P++ + G + F++ E EGL
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS----YGKIKFINMIRE--EGL 247
Query: 604 DP 605
P
Sbjct: 248 RP 249
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 130/235 (55%), Gaps = 17/235 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 321
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + + L + + + MA +A GM Y+
Sbjct: 322 EK-LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 380
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 381 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 438
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GF-MDRRLELPEGL 603
KSDV+SFG++L EL T +P+ + +V+ V G+ M E PE L
Sbjct: 439 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL 493
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 110/197 (55%), Gaps = 9/197 (4%)
Query: 383 GEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYI--EGTLKNYQKEIDIIKKLRHPNVLLF 440
G ++G G + VVY+G N + VAVK I E + + +EI ++ K +H N++
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
+G + + L +V ++P GSL L L R ++A A G+N+LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRSEPSN 556
+HRD+KS+N+L+D+ +T K+ DFGL+ T R GT +MAPE LR E +
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEIT- 212
Query: 557 EKSDVFSFGVILWELVT 573
KSD++SFGV+L E++T
Sbjct: 213 PKSDIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 9/197 (4%)
Query: 383 GEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYI--EGTLKNYQKEIDIIKKLRHPNVLLF 440
G ++G G + VVY+G N + VAVK I E + + +EI ++ K +H N++
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
+G + + L +V ++P GSL L L R ++A A G+N+LH +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGL--SSLKNATYLTAKSGRGTPQWMAPEVLRSEPSN 556
+HRD+KS+N+L+D+ +T K+ DFGL +S K A + GT +MAPE LR E +
Sbjct: 149 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEIT- 206
Query: 557 EKSDVFSFGVILWELVT 573
KSD++SFGV+L E++T
Sbjct: 207 PKSDIYSFGVVLLEIIT 223
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 135/242 (55%), Gaps = 27/242 (11%)
Query: 379 DLQLGEEIGLGSYAVVYRG--IWNGSDVAVK-VYFG-----SEYIEGTLKNYQKEIDIIK 430
+++ ++IG G + +V++G + + S VA+K + G +E IE + +Q+E+ I+
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE-KFQEFQREVFIMS 78
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMN 490
L HPN++ G + + R+ V EF+P G L+ L + +LR+ LD+A G+
Sbjct: 79 NLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 491 YLHHRNPPIVHRDLKSSNLL---VDKNWTV--KVGDFGLSSLKNATYLTAKSGRGTPQWM 545
Y+ ++NPPIVHRDL+S N+ +D+N V KV DF LS + + G QWM
Sbjct: 137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---QQSVHSVSGLLGNFQWM 193
Query: 546 APEVLRSEPSN--EKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGL 603
APE + +E + EK+D +SF +IL+ ++T P++ + G + F++ E EGL
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS----YGKIKFINMIRE--EGL 247
Query: 604 DP 605
P
Sbjct: 248 RP 249
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 112/214 (52%), Gaps = 12/214 (5%)
Query: 379 DLQLGEEIGLGSYAVVYRGIW-NGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHP 435
+L +EIG G + +V+ G W N VA+K EG + +++ +E +++ KL HP
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-----REGAMSEEDFIEEAEVMMKLSHP 62
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
++ G Q + +V EF+ G L L + L M LDV GM YL
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSEP 554
+ ++HRDL + N LV +N +KV DFG++ T+ +G P +W +PEV
Sbjct: 123 S--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 555 SNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
+ KSDV+SFGV++WE+ + IP+ N + +VV
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 12/214 (5%)
Query: 379 DLQLGEEIGLGSYAVVYRGIW-NGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHP 435
+L +EIG G + +V+ G W N VA+K EG + +++ +E +++ KL HP
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-----REGAMSEEDFIEEAEVMMKLSHP 62
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
++ G Q + +V EF+ G L L + L M LDV GM YL
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-- 120
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSEP 554
++HRDL + N LV +N +KV DFG++ T+ +G P +W +PEV
Sbjct: 121 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 555 SNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
+ KSDV+SFGV++WE+ + IP+ N + +VV
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 115/201 (57%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 62
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + + L + + + MA +A GM Y+
Sbjct: 63 EK-LVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 122 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 179
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 180 GRFTIKSDVWSFGILLTELTT 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 129/237 (54%), Gaps = 17/237 (7%)
Query: 374 GIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLR 433
+ ++L+L + IG G + V G + G+ VAVK + T + + E ++ +LR
Sbjct: 17 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKN----DATAQAFLAEASVMTQLR 72
Query: 434 HPNVLLFMGAVASQER-LGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNY 491
H N++ +G + ++ L IVTE++ +GSL L + L L+ +LDV M Y
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR 551
L N VHRDL + N+LV ++ KV DFGL+ ++T +G+ +W APE LR
Sbjct: 133 LEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALR 187
Query: 552 SEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GFMDRRLELPEGLDP 605
+ + KSDV+SFG++LWE+ + +P+ + L VV V G+ +++ P+G P
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY---KMDAPDGCPP 241
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 12/214 (5%)
Query: 379 DLQLGEEIGLGSYAVVYRGIW-NGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHP 435
+L +EIG G + +V+ G W N VA+K EG + +++ +E +++ KL HP
Sbjct: 6 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-----REGAMSEEDFIEEAEVMMKLSHP 60
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
++ G Q + +V EF+ G L L + L M LDV GM YL
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-- 118
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSEP 554
++HRDL + N LV +N +KV DFG++ T+ +G P +W +PEV
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 178
Query: 555 SNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
+ KSDV+SFGV++WE+ + IP+ N + +VV
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 212
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 12/214 (5%)
Query: 379 DLQLGEEIGLGSYAVVYRGIW-NGSDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRHP 435
+L +EIG G + +V+ G W N VA+K EG++ ++ +E +++ KL HP
Sbjct: 28 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-----KEGSMSEDDFIEEAEVMMKLSHP 82
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
++ G Q + +V EF+ G L L + L M LDV GM YL
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL--E 140
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSEP 554
++HRDL + N LV +N +KV DFG++ T+ +G P +W +PEV
Sbjct: 141 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 200
Query: 555 SNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
+ KSDV+SFGV++WE+ + IP+ N + +VV
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 234
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 12/214 (5%)
Query: 379 DLQLGEEIGLGSYAVVYRGIW-NGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHP 435
+L +EIG G + +V+ G W N VA+K EG + +++ +E +++ KL HP
Sbjct: 11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-----REGAMSEEDFIEEAEVMMKLSHP 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
++ G Q + +V EF+ G L L + L M LDV GM YL
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE-- 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSEP 554
++HRDL + N LV +N +KV DFG++ T+ +G P +W +PEV
Sbjct: 124 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 183
Query: 555 SNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
+ KSDV+SFGV++WE+ + IP+ N + +VV
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 217
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 130/235 (55%), Gaps = 17/235 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 238
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + + L + + + MA +A GM Y+
Sbjct: 239 EK-LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 298 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GF-MDRRLELPEGL 603
KSDV+SFG++L EL T +P+ + +V+ V G+ M E PE L
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL 410
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 130/235 (55%), Gaps = 17/235 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 238
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + + L + + + MA +A GM Y+
Sbjct: 239 EK-LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 298 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GF-MDRRLELPEGL 603
KSDV+SFG++L EL T +P+ + +V+ V G+ M E PE L
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL 410
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 129/237 (54%), Gaps = 17/237 (7%)
Query: 374 GIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLR 433
+ ++L+L + IG G + V G + G+ VAVK + T + + E ++ +LR
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKN----DATAQAFLAEASVMTQLR 57
Query: 434 HPNVLLFMGAVASQER-LGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNY 491
H N++ +G + ++ L IVTE++ +GSL L + L L+ +LDV M Y
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR 551
L N VHRDL + N+LV ++ KV DFGL+ ++T +G+ +W APE LR
Sbjct: 118 LEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALR 172
Query: 552 SEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GFMDRRLELPEGLDP 605
+ + KSDV+SFG++LWE+ + +P+ + L VV V G+ +++ P+G P
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY---KMDAPDGCPP 226
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 128/237 (54%), Gaps = 17/237 (7%)
Query: 374 GIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLR 433
+ ++L+L + IG G + V G + G+ VAVK + T + + E ++ +LR
Sbjct: 8 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKN----DATAQAFLAEASVMTQLR 63
Query: 434 HPNVLLFMGAVASQER-LGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNY 491
H N++ +G + ++ L IVTE++ +GSL L + L L+ +LDV M Y
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 123
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR 551
L N VHRDL + N+LV ++ KV DFGL+ ++T +G+ +W APE LR
Sbjct: 124 LEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALR 178
Query: 552 SEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GFMDRRLELPEGLDP 605
+ KSDV+SFG++LWE+ + +P+ + L VV V G+ +++ P+G P
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY---KMDAPDGCPP 232
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 115/201 (57%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 65
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + + L + + + MA +A GM Y+
Sbjct: 66 EK-LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 125 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 182
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 183 GRFTIKSDVWSFGILLTELTT 203
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 114/201 (56%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + L + + + MA +A GM Y+
Sbjct: 73 EK-LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 114/201 (56%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 63
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + L + + + MA +A GM Y+
Sbjct: 64 EK-LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 122
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 123 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 180
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 181 GRFTIKSDVWSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 114/201 (56%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 61
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + L + + + MA +A GM Y+
Sbjct: 62 EK-LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 120
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 121 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 178
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 179 GRFTIKSDVWSFGILLTELTT 199
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 116/197 (58%), Gaps = 9/197 (4%)
Query: 386 IGLGSYAVVYRG-IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG-A 443
+G G + VY+G + +G+ VAVK E +G +Q E+++I H N+L G
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVK-RLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 444 VASQERLGIVTEFLPRGSLFKTLHKNYQA---LDIKRRLRMALDVARGMNYLH-HRNPPI 499
+ ERL +V ++ GS+ L + ++ LD +R R+AL ARG+ YLH H +P I
Sbjct: 105 MTPTERL-LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKN-ATYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
+HRD+K++N+L+D+ + VGDFGL+ L + + RGT +APE L + S+EK
Sbjct: 164 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEK 223
Query: 559 SDVFSFGVILWELVTAS 575
+DVF +GV+L EL+T
Sbjct: 224 TDVFGYGVMLLELITGQ 240
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 114/201 (56%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KK+RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKIRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + L + + + MA +A GM Y+
Sbjct: 73 EK-LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 113/201 (56%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + L + + + MA +A GM Y+
Sbjct: 73 EK-LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL ++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 132 RMN--YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 119/217 (54%), Gaps = 16/217 (7%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGS----EYIEGTLKNYQKEIDIIKKLRHP 435
L+ EIG GS+ VY+G+ ++ V+V + + + + +++E + +K L+HP
Sbjct: 28 LKFDIEIGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHP 85
Query: 436 NVLLFM----GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
N++ F V ++ + +VTE G+L KT K ++ IK + +G+ +
Sbjct: 86 NIVRFYDSWESTVKGKKCIVLVTELXTSGTL-KTYLKRFKVXKIKVLRSWCRQILKGLQF 144
Query: 492 LHHRNPPIVHRDLKSSNLLVD-KNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVL 550
LH R PPI+HRDLK N+ + +VK+GD GL++LK A++ AK+ GTP++ APE
Sbjct: 145 LHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF--AKAVIGTPEFXAPEXY 202
Query: 551 RSEPSNEKSDVFSFGVILWELVTASIPWNNL-NLMQV 586
E +E DV++FG E T+ P++ N Q+
Sbjct: 203 -EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQI 238
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +G L L + L + + + MA +A GM Y+
Sbjct: 73 EK-LVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IV E++ +GSL L + L + + + MA +A GM Y+
Sbjct: 73 EK-LVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 115/201 (57%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 69
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + + L + + + M+ +A GM Y+
Sbjct: 70 EK-LVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 129 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 186
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 187 GRFTIKSDVWSFGILLTELTT 207
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IV E++ +GSL L + L + + + MA +A GM Y+
Sbjct: 73 EK-LVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IV E++ +GSL L + L + + + MA +A GM Y+
Sbjct: 73 EK-LVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 189
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 115/201 (57%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 69
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IVTE++ +GSL L + + L + + + M+ +A GM Y+
Sbjct: 70 EK-LVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 129 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALY 186
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 187 GRFTIKSDVWSFGILLTELTT 207
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 129/235 (54%), Gaps = 17/235 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 238
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IV E++ +GSL L + + L + + + MA +A GM Y+
Sbjct: 239 EK-LVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 298 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GF-MDRRLELPEGL 603
KSDV+SFG++L EL T +P+ + +V+ V G+ M E PE L
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL 410
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 126/233 (54%), Gaps = 13/233 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
E L+L ++G G + V+ G WNG+ VA+K + + + +E ++KKLRH
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNM---SPEAFLQEAQVMKKLRHEK 241
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLHHR 495
L+ + AV S+E + IVTE++ +GSL L + L + + + MA +A GM Y+
Sbjct: 242 -LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSEP 554
N VHRDL+++N+LV +N KV DFGL L TA+ G P +W APE
Sbjct: 301 N--YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 555 SNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GF-MDRRLELPEGL 603
KSDV+SFG++L EL T +P+ + +V+ V G+ M E PE L
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL 411
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 112/213 (52%), Gaps = 8/213 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPN 436
EDL LGE+IG G++ V+ G + V V E + LK + +E I+K+ HPN
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
++ +G ++ + IV E + G L L +K L+M D A GM YL +
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 497 PPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSG--RGTP-QWMAPEVLRSE 553
+HRDL + N LV + +K+ DFG+S + A + A SG R P +W APE L
Sbjct: 234 --CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 554 PSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQ 585
+ +SDV+SFG++LWE + + P+ NL+ Q
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 13/234 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWN---GSDVAVKVYFGSEYIEG---TLKNYQKEIDIIKK 431
+DL+L E++G GS+ VV RG W+ G V+V V + + ++ +E++ +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L H N++ G V + + +VTE P GSL L K+ + R A+ VA GM Y
Sbjct: 78 LDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTP-QWMAPE 548
L + +HRDL + NLL+ VK+GDFGL +N + + R P W APE
Sbjct: 137 LESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 549 VLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L++ + SD + FGV LWE+ T PW LN Q++ + RL PE
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 248
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 110/212 (51%), Gaps = 6/212 (2%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPN 436
EDL LGE+IG G++ V+ G + V V E + LK + +E I+K+ HPN
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
++ +G ++ + IV E + G L L +K L+M D A GM YL +
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 497 PPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLK-NATYLTAKSGRGTP-QWMAPEVLRSEP 554
+HRDL + N LV + +K+ DFG+S + + Y + R P +W APE L
Sbjct: 234 --CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 555 SNEKSDVFSFGVILWELVT-ASIPWNNLNLMQ 585
+ +SDV+SFG++LWE + + P+ NL+ Q
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 77
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 78 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 137 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 194
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 230
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 13/234 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWN---GSDVAVKVYFGSEYIEG---TLKNYQKEIDIIKK 431
+DL+L E++G GS+ VV RG W+ G V+V V + + ++ +E++ +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L H N++ G V + + +VTE P GSL L K+ + R A+ VA GM Y
Sbjct: 78 LDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTP-QWMAPE 548
L + +HRDL + NLL+ VK+GDFGL +N + + R P W APE
Sbjct: 137 LESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 549 VLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L++ + SD + FGV LWE+ T PW LN Q++ + RL PE
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 248
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 73
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 74 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 133 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 190
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 62
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 63 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 122 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 179
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 75
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 76 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 135 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 192
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 228
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 13/234 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWN---GSDVAVKVYFGSEYIEG---TLKNYQKEIDIIKK 431
+DL+L E++G GS+ VV RG W+ G V+V V + + ++ +E++ +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L H N++ G V + + +VTE P GSL L K+ + R A+ VA GM Y
Sbjct: 72 LDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTP-QWMAPE 548
L + +HRDL + NLL+ VK+GDFGL +N + + R P W APE
Sbjct: 131 LESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 549 VLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L++ + SD + FGV LWE+ T PW LN Q++ + RL PE
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 242
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 67
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 68 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 127 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 184
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 76
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 77 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 136 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 193
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 229
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 73 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 132 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 189
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 225
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 13/234 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWN---GSDVAVKVYFGSEYIEG---TLKNYQKEIDIIKK 431
+DL+L E++G GS+ VV RG W+ G V+V V + + ++ +E++ +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L H N++ G V + + +VTE P GSL L K+ + R A+ VA GM Y
Sbjct: 72 LDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTP-QWMAPE 548
L + +HRDL + NLL+ VK+GDFGL +N + + R P W APE
Sbjct: 131 LESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 549 VLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L++ + SD + FGV LWE+ T PW LN Q++ + RL PE
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 242
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 73
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 74 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 133 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 190
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 114/197 (57%), Gaps = 9/197 (4%)
Query: 386 IGLGSYAVVYRG-IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG-A 443
+G G + VY+G + +G VAVK E +G +Q E+++I H N+L G
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVK-RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 444 VASQERLGIVTEFLPRGSLFKTLHKNYQA---LDIKRRLRMALDVARGMNYLH-HRNPPI 499
+ ERL +V ++ GS+ L + ++ LD +R R+AL ARG+ YLH H +P I
Sbjct: 97 MTPTERL-LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKN-ATYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
+HRD+K++N+L+D+ + VGDFGL+ L + + RG +APE L + S+EK
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEK 215
Query: 559 SDVFSFGVILWELVTAS 575
+DVF +GV+L EL+T
Sbjct: 216 TDVFGYGVMLLELITGQ 232
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 13/234 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWN---GSDVAVKVYFGSEYIEG---TLKNYQKEIDIIKK 431
+DL+L E++G GS+ VV RG W+ G V+V V + + ++ +E++ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L H N++ G V + + +VTE P GSL L K+ + R A+ VA GM Y
Sbjct: 68 LDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTP-QWMAPE 548
L + +HRDL + NLL+ VK+GDFGL +N + + R P W APE
Sbjct: 127 LESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 549 VLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L++ + SD + FGV LWE+ T PW LN Q++ + RL PE
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 238
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 112/201 (55%), Gaps = 13/201 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-VAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRH 434
E L+L ++G G + V+ G WNG+ VA+K GT+ + + +E ++KKLRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-----KPGTMSPEAFLQEAQVMKKLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLH 493
L+ + AV S+E + IV E++ +G L L + L + + + MA +A GM Y+
Sbjct: 73 EK-LVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
N VHRDL+++N+LV +N KV DFGL+ L TA+ G P +W APE
Sbjct: 132 RMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 553 EPSNEKSDVFSFGVILWELVT 573
KSDV+SFG++L EL T
Sbjct: 190 GRFTIKSDVWSFGILLTELTT 210
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 13/234 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWN---GSDVAVKVYFGSEYIEG---TLKNYQKEIDIIKK 431
+DL+L E++G GS+ VV RG W+ G V+V V + + ++ +E++ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L H N++ G V + + +VTE P GSL L K+ + R A+ VA GM Y
Sbjct: 68 LDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTP-QWMAPE 548
L + +HRDL + NLL+ VK+GDFGL +N + + R P W APE
Sbjct: 127 LESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 549 VLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L++ + SD + FGV LWE+ T PW LN Q++ + RL PE
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 238
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 13/234 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWN---GSDVAVKVYFGSEYIEG---TLKNYQKEIDIIKK 431
+DL+L E++G GS+ VV RG W+ G V+V V + + ++ +E++ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L H N++ G V + + +VTE P GSL L K+ + R A+ VA GM Y
Sbjct: 68 LDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTP-QWMAPE 548
L + +HRDL + NLL+ VK+GDFGL +N + + R P W APE
Sbjct: 127 LESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 549 VLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L++ + SD + FGV LWE+ T PW LN Q++ + RL PE
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 238
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 68
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 69 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 128 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 185
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 221
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 69
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 70 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 129 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 186
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 13/211 (6%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH 434
I ++++++ E +G G++ VV + W DVA+K E K + E+ + ++ H
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIES----ESERKAFIVELRQLSRVNH 61
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYL 492
PN++ GA + + +V E+ GSL+ LH + + L ++G+ YL
Sbjct: 62 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 493 HHRNP-PIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVL 550
H P ++HRDLK NLL+ TV K+ DFG ++ T++T + +G+ WMAPEV
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-TACDIQTHMT--NNKGSAAWMAPEVF 176
Query: 551 RSEPSNEKSDVFSFGVILWELVTASIPWNNL 581
+EK DVFS+G+ILWE++T P++ +
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 67
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 68 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 127 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 184
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 67
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 68 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 127 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINY 184
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 122/240 (50%), Gaps = 13/240 (5%)
Query: 373 GGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
GI ++ L ++ +++G W G+D+ VKV ++ +++ +E ++
Sbjct: 5 SGIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF 64
Query: 433 RHPNVLLFMGAVAS--QERLGIVTEFLPRGSLFKTLHKNYQ-ALDIKRRLRMALDVARGM 489
HPNVL +GA S ++T + P GSL+ LH+ +D + ++ ALD ARG
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGX 124
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRG-TPQWMAPE 548
+LH P I L S ++ +D++ T ++ S + + GR P W+APE
Sbjct: 125 AFLHTLEPLIPRHALNSRSVXIDEDXTARI------SXADVKFSFQSPGRXYAPAWVAPE 178
Query: 549 VLRSEP--SNEKS-DVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
L+ +P +N +S D +SF V+LWELVT +P+ +L+ ++ V R +P G+ P
Sbjct: 179 ALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISP 238
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 13/211 (6%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH 434
I ++++++ E +G G++ VV + W DVA+K E K + E+ + ++ H
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIES----ESERKAFIVELRQLSRVNH 60
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYL 492
PN++ GA + + +V E+ GSL+ LH + + L ++G+ YL
Sbjct: 61 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 493 HHRNP-PIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVL 550
H P ++HRDLK NLL+ TV K+ DFG ++ T++T + +G+ WMAPEV
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-TACDIQTHMT--NNKGSAAWMAPEVF 175
Query: 551 RSEPSNEKSDVFSFGVILWELVTASIPWNNL 581
+EK DVFS+G+ILWE++T P++ +
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH 434
I +E L++GE IG G + VY G W+G +VA+++ E LK +++E+ ++ RH
Sbjct: 30 IPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
NV+LFMGA S L I+T +L+ + LD+ + ++A ++ +GM YLH
Sbjct: 89 ENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA 148
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQ--W---MAPEV 549
+ I+H+DLKS N+ D N V + DFGL S+ + + Q W +APE+
Sbjct: 149 KG--ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI 205
Query: 550 LRS---------EPSNEKSDVFSFGVILWELVTASIPWNN 580
+R P ++ SDVF+ G I +EL P+
Sbjct: 206 IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT 245
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 9/197 (4%)
Query: 383 GEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYI--EGTLKNYQKEIDIIKKLRHPNVLLF 440
G + G G + VVY+G N + VAVK I E + + +EI + K +H N++
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
+G + + L +V + P GSL L L R ++A A G+N+LH +
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH- 145
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGL--SSLKNATYLTAKSGRGTPQWMAPEVLRSEPSN 556
+HRD+KS+N+L+D+ +T K+ DFGL +S K A + GT + APE LR E +
Sbjct: 146 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEIT- 203
Query: 557 EKSDVFSFGVILWELVT 573
KSD++SFGV+L E++T
Sbjct: 204 PKSDIYSFGVVLLEIIT 220
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G + V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 63
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 64 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HR+L+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 123 ERN--YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 180
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 14/216 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYFGSEYIEGTLK--NYQKEIDIIKKLRH 434
E L+L E +G G V+ G +NG + VAVK +G++ + E +++K+L+H
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKVAVK-----SLKQGSMSPDAFLAEANLMKQLQH 67
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHK-NYQALDIKRRLRMALDVARGMNYLH 493
L+ + AV +QE + I+TE++ GSL L + L I + L MA +A GM ++
Sbjct: 68 QR-LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRS 552
RN +HRDL+++N+LV + K+ DFGL+ L TA+ G P +W APE +
Sbjct: 127 ERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINY 184
Query: 553 EPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVV 587
KSDV+SFG++L E+VT IP+ + +V+
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 365 NETSCATDGGIRWE----DLQLGEEIGLGSYAVVYRGIWNGS-DVAVKVYFGSEYIEGTL 419
N S A G WE DL +E+G G + VV G W G DVA+K+ EG++
Sbjct: 7 NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-----KEGSM 61
Query: 420 KN--YQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKR 477
+ +E ++ L H ++ G Q + I+TE++ G L L + ++
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 121
Query: 478 RLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKS 537
L M DV M YL + +HRDL + N LV+ VKV DFGLS T+
Sbjct: 122 LLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179
Query: 538 GRGTP-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
G P +W PEVL + KSD+++FGV++WE+ +
Sbjct: 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 365 NETSCATDGGIRWE----DLQLGEEIGLGSYAVVYRGIWNGS-DVAVKVYFGSEYIEGTL 419
N S A G WE DL +E+G G + VV G W G DVA+K+ EG++
Sbjct: 7 NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-----KEGSM 61
Query: 420 KN--YQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKR 477
+ +E ++ L H ++ G Q + I+TE++ G L L + ++
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 121
Query: 478 RLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKS 537
L M DV M YL + +HRDL + N LV+ VKV DFGLS T+
Sbjct: 122 LLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV 179
Query: 538 GRGTP-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
G P +W PEVL + KSD+++FGV++WE+ +
Sbjct: 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 112/216 (51%), Gaps = 29/216 (13%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK--LRHP 435
+ +Q+ ++IG G Y V+ G W G VAVKV+F +E ++ +E +I + +RH
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEE-----ASWFRETEIYQTVLMRHE 91
Query: 436 NVLLFMGA----VASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
N+L F+ A S +L ++T++ GSL+ L LD K L++A G+ +
Sbjct: 92 NILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCH 149
Query: 492 LHHR------NPPIVHRDLKSSNLLVDKNWTVKVGDFGLS----SLKNATYLTAKSGRGT 541
LH P I HRDLKS N+LV KN T + D GL+ S N + + GT
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGT 209
Query: 542 PQWMAPEVLRSE------PSNEKSDVFSFGVILWEL 571
++M PEVL S +D++SFG+ILWE+
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 15/208 (7%)
Query: 374 GIRWE----DLQLGEEIGLGSYAVVYRGIWNGS-DVAVKVYFGSEYIEGTLKN--YQKEI 426
G WE DL +E+G G + VV G W G DVA+K+ EG++ + +E
Sbjct: 1 GGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-----KEGSMSEDEFIEEA 55
Query: 427 DIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVA 486
++ L H ++ G Q + I+TE++ G L L + ++ L M DV
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVC 115
Query: 487 RGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWM 545
M YL + +HRDL + N LV+ VKV DFGLS + + Y +++ + +W
Sbjct: 116 EAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWS 173
Query: 546 APEVLRSEPSNEKSDVFSFGVILWELVT 573
PEVL + KSD+++FGV++WE+ +
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 400 NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGI--VTEFL 457
G VAVK E + + +KEI+I++ L H N++ + G GI + EFL
Sbjct: 49 TGEQVAVKS-LKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 458 PRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTV 517
P GSL + L KN +++K++L+ A+ + +GM+YL R VHRDL + N+LV+ V
Sbjct: 108 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQV 165
Query: 518 KVGDFGLSSL--KNATYLTAKSGRGTPQ-WMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
K+GDFGL+ + T K R +P W APE L SDV+SFGV L EL+T
Sbjct: 166 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGS-DVAVKVYFGSEYIEGTLKN--YQKEIDIIKKLRH 434
+DL +E+G G + VV G W G DVA+K+ EG++ + +E ++ L H
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-----KEGSMSEDEFIEEAKVMMNLSH 62
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
++ G Q + I+TE++ G L L + ++ L M DV M YL
Sbjct: 63 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 122
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSE 553
+ +HRDL + N LV+ VKV DFGLS T+ G P +W PEVL
Sbjct: 123 KQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 180
Query: 554 PSNEKSDVFSFGVILWELVT 573
+ KSD+++FGV++WE+ +
Sbjct: 181 KFSSKSDIWAFGVLMWEIYS 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGS-DVAVKVYFGSEYIEGTLKN--YQKEIDIIKKLRH 434
+DL +E+G G + VV G W G DVA+K+ EG++ + +E ++ L H
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-----KEGSMSEDEFIEEAKVMMNLSH 58
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
++ G Q + I+TE++ G L L + ++ L M DV M YL
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSE 553
+ +HRDL + N LV+ VKV DFGLS T+ G P +W PEVL
Sbjct: 119 KQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 554 PSNEKSDVFSFGVILWELVT 573
+ KSD+++FGV++WE+ +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYS 196
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 111/206 (53%), Gaps = 8/206 (3%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEY-IEGTLKNYQKEIDIIKKLRH 434
+D +G +G G + VY R N +A+KV F S+ EG ++EI+I LRH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L ++R+ ++ EF PRG L+K L K+ + D +R ++A ++Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHE 132
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
R ++HRD+K NLL+ +K+ DFG S +A L + GT ++ PE++ +
Sbjct: 133 RK--VIHRDIKPENLLMGYKGELKIADFGWSV--HAPSLRRRXMCGTLDYLPPEMIEGKT 188
Query: 555 SNEKSDVFSFGVILWELVTASIPWNN 580
+EK D++ GV+ +E + P+++
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 8/206 (3%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEY-IEGTLKNYQKEIDIIKKLRH 434
+D +G +G G + VY R N +A+KV F S+ EG ++EI+I LRH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L ++R+ ++ EF PRG L+K L K + D +R ++A ++Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHE 133
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
R ++HRD+K NLL+ +K+ DFG S +A L + GT ++ PE++ +
Sbjct: 134 RK--VIHRDIKPENLLMGYKGELKIADFGWSV--HAPSLRRRXMCGTLDYLPPEMIEGKT 189
Query: 555 SNEKSDVFSFGVILWELVTASIPWNN 580
+EK D++ GV+ +E + P+++
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 10/203 (4%)
Query: 404 VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLF 463
VA+K S Y E +++ E I+ + HPNV+ G V + I+TEF+ GSL
Sbjct: 64 VAIKT-LKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 464 KTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFG 523
L +N + + + M +A GM YL N VHRDL + N+LV+ N KV DFG
Sbjct: 123 SFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--YVHRDLAARNILVNSNLVCKVSDFG 180
Query: 524 LSSL-----KNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIP 577
LS + TY +A G+ +W APE ++ SDV+S+G+++WE+++ P
Sbjct: 181 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
Query: 578 WNNLNLMQVVGVVGFMDRRLELP 600
+ ++ V+ + D RL P
Sbjct: 241 YWDMTNQDVINAIE-QDYRLPPP 262
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 400 NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGI--VTEFL 457
G VAVK E + + +KEI+I++ L H N++ + G GI + EFL
Sbjct: 37 TGEQVAVKS-LKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 458 PRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTV 517
P GSL + L KN +++K++L+ A+ + +GM+YL R VHRDL + N+LV+ V
Sbjct: 96 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQV 153
Query: 518 KVGDFGLSSL--KNATYLTAKSGRGTPQ-WMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
K+GDFGL+ + T K R +P W APE L SDV+SFGV L EL+T
Sbjct: 154 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGS-DVAVKVYFGSEYIEGTLKN--YQKEIDIIKKLRH 434
+DL +E+G G + VV G W G DVA+K+ EG++ + +E ++ L H
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-----KEGSMSEDEFIEEAKVMMNLSH 69
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
++ G Q + I+TE++ G L L + ++ L M DV M YL
Sbjct: 70 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 129
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSE 553
+ +HRDL + N LV+ VKV DFGLS T+ G P +W PEVL
Sbjct: 130 KQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 187
Query: 554 PSNEKSDVFSFGVILWELVT 573
+ KSD+++FGV++WE+ +
Sbjct: 188 KFSSKSDIWAFGVLMWEIYS 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGS-DVAVKVYFGSEYIEGTLKN--YQKEIDIIKKLRH 434
+DL +E+G G + VV G W G DVA+K+ EG++ + +E ++ L H
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-----KEGSMSEDEFIEEAKVMMNLSH 63
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
++ G Q + I+TE++ G L L + ++ L M DV M YL
Sbjct: 64 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSE 553
+ +HRDL + N LV+ VKV DFGLS T+ G P +W PEVL
Sbjct: 124 KQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS 181
Query: 554 PSNEKSDVFSFGVILWELVT 573
+ KSD+++FGV++WE+ +
Sbjct: 182 KFSSKSDIWAFGVLMWEIYS 201
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 130/234 (55%), Gaps = 15/234 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYF-GSEYIEGTLKNYQKEIDIIKKLRHP 435
E L+L +++G G + V+ +N + VAVK GS +E L E +++K L+H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLA----EANVMKTLQH- 242
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD-IKRRLRMALDVARGMNYLHH 494
+ L+ + AV ++E + I+TEF+ +GSL L + + + + + + +A GM ++
Sbjct: 243 DKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSE 553
RN +HRDL+++N+LV + K+ DFGL+ + TA+ G P +W APE +
Sbjct: 303 RN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 360
Query: 554 PSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GF-MDRRLELPEGL 603
KSDV+SFG++L E+VT IP+ ++ +V+ + G+ M R PE L
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL 414
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 116/221 (52%), Gaps = 29/221 (13%)
Query: 373 GGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK- 431
GG + L E IG G + V+RG W G +VAVK++ E +++ +E +I +
Sbjct: 1 GGTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----RSWFREAEIYQTV 55
Query: 432 -LRHPNVLLFMGA----VASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVA 486
LRH N+L F+ A + +L +V+++ GSLF L N + ++ +++AL A
Sbjct: 56 MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTA 113
Query: 487 RGMNYLHHR------NPPIVHRDLKSSNLLVDKNWTVKVGDFGLS----SLKNATYLTAK 536
G+ +LH P I HRDLKS N+LV KN T + D GL+ S + +
Sbjct: 114 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN 173
Query: 537 SGRGTPQWMAPEVL------RSEPSNEKSDVFSFGVILWEL 571
GT ++MAPEVL + S +++D+++ G++ WE+
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 130/234 (55%), Gaps = 15/234 (6%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYF-GSEYIEGTLKNYQKEIDIIKKLRHP 435
E L+L +++G G + V+ +N + VAVK GS +E L E +++K L+H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLA----EANVMKTLQH- 69
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD-IKRRLRMALDVARGMNYLHH 494
+ L+ + AV ++E + I+TEF+ +GSL L + + + + + + +A GM ++
Sbjct: 70 DKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSE 553
RN +HRDL+++N+LV + K+ DFGL+ + TA+ G P +W APE +
Sbjct: 130 RN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 187
Query: 554 PSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GF-MDRRLELPEGL 603
KSDV+SFG++L E+VT IP+ ++ +V+ + G+ M R PE L
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL 241
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 126/233 (54%), Gaps = 12/233 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGS-DVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
E ++L +++G G + V+ G +N S VAVK +++ + +E +++K L+H
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDK 68
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQA-LDIKRRLRMALDVARGMNYLHHR 495
++ V +E + I+TEF+ +GSL L + + + + + + +A GM Y+ +
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSEP 554
N +HRDL+++N+LV ++ K+ DFGL+ + TA+ G P +W APE +
Sbjct: 129 N--YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC 186
Query: 555 SNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMDRRLELPEGL 603
KS+V+SFG++L+E+VT IP+ N ++M + M R P+ L
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDEL 239
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTPQ-WMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + ++ + K +P W APE L
Sbjct: 132 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 111/215 (51%), Gaps = 29/215 (13%)
Query: 379 DLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK--LRHPN 436
D+ L E +G G Y V+RG W G +VAVK++ + K++ +E ++ LRH N
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDE-----KSWFRETELYNTVMLRHEN 63
Query: 437 VLLF----MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
+L F M + S +L ++T + GSL+ L LD LR+ L +A G+ +L
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAHL 121
Query: 493 H------HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR----GTP 542
H P I HRDLKS N+LV KN + D GL+ + + + G GT
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 543 QWMAPEVLRSE------PSNEKSDVFSFGVILWEL 571
++MAPEVL S ++ D+++FG++LWE+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM YL
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 148
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTA--KSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ + + Y + K+G P +WMA E
Sbjct: 149 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 258
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 29/212 (13%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK--LRHPNVLL 439
L E IG G + V+RG W G +VAVK++ E +++ +E +I + LRH N+L
Sbjct: 13 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----RSWFREAEIYQTVMLRHENILG 67
Query: 440 FMGA----VASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
F+ A + +L +V+++ GSLF L N + ++ +++AL A G+ +LH
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 496 ------NPPIVHRDLKSSNLLVDKNWTVKVGDFGLS----SLKNATYLTAKSGRGTPQWM 545
P I HRDLKS N+LV KN T + D GL+ S + + GT ++M
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 546 APEVL------RSEPSNEKSDVFSFGVILWEL 571
APEVL + S +++D+++ G++ WE+
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 29/212 (13%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK--LRHPNVLL 439
L E IG G + V+RG W G +VAVK++ E +++ +E +I + LRH N+L
Sbjct: 8 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----RSWFREAEIYQTVMLRHENILG 62
Query: 440 FMGA----VASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
F+ A + +L +V+++ GSLF L N + ++ +++AL A G+ +LH
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 496 ------NPPIVHRDLKSSNLLVDKNWTVKVGDFGLS----SLKNATYLTAKSGRGTPQWM 545
P I HRDLKS N+LV KN T + D GL+ S + + GT ++M
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 546 APEVL------RSEPSNEKSDVFSFGVILWEL 571
APEVL + S +++D+++ G++ WE+
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 50 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM YL
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 168
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTA--KSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ + + Y + K+G P +WMA E
Sbjct: 169 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 278
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 14/198 (7%)
Query: 386 IGLGSYAVVYRGIWNGSD------VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLL 439
IG G + VY+G+ S VA+K + Y E ++ E I+ + H N++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKT-LKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
G ++ + + I+TE++ G+L K L + + + + M +A GM YL + N
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN--Y 168
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSL----KNATYLTAKSGRGTPQWMAPEVLRSEPS 555
VHRDL + N+LV+ N KV DFGLS + ATY T+ G+ +W APE +
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS-GGKIPIRWTAPEAISYRKF 227
Query: 556 NEKSDVFSFGVILWELVT 573
SDV+SFG+++WE++T
Sbjct: 228 TSASDVWSFGIVMWEVMT 245
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM YL
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 150
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTA--KSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ + + Y + K+G P +WMA E
Sbjct: 151 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 260
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 29/212 (13%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK--LRHPNVLL 439
L E IG G + V+RG W G +VAVK++ E +++ +E +I + LRH N+L
Sbjct: 33 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----RSWFREAEIYQTVMLRHENILG 87
Query: 440 FMGA----VASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
F+ A + +L +V+++ GSLF L N + ++ +++AL A G+ +LH
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 496 ------NPPIVHRDLKSSNLLVDKNWTVKVGDFGLS----SLKNATYLTAKSGRGTPQWM 545
P I HRDLKS N+LV KN T + D GL+ S + + GT ++M
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 546 APEVL------RSEPSNEKSDVFSFGVILWEL 571
APEVL + S +++D+++ G++ WE+
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 27 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM YL
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 145
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTA--KSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ + + Y + K+G P +WMA E
Sbjct: 146 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 255
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 125/233 (53%), Gaps = 12/233 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGS-DVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
E ++L + +G G + V+ G +N S VAVK +++ + +E +++K L+H
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDK 69
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQA-LDIKRRLRMALDVARGMNYLHHR 495
++ V +E + I+TE++ +GSL L + + + + + + +A GM Y+ +
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSEP 554
N +HRDL+++N+LV ++ K+ DFGL+ + TA+ G P +W APE +
Sbjct: 130 N--YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC 187
Query: 555 SNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMDRRLELPEGL 603
KSDV+SFG++L+E+VT IP+ N ++M + M R P+ L
Sbjct: 188 FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDEL 240
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 123/227 (54%), Gaps = 11/227 (4%)
Query: 365 NETSCATDGGIRWEDLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNY 422
N + ATD + +L + IG G++A V R + G +VAVK+ ++ +L+
Sbjct: 2 NSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKL 61
Query: 423 QKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLR 480
+E+ I+K L HPN++ + +++ L +V E+ G +F L H + + + + R
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 121
Query: 481 MALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRG 540
+ + Y H + IVHRDLK+ NLL+D + +K+ DFG S+ + + G
Sbjct: 122 ---QIVSAVQYCHQKY--IVHRDLKAENLLLDGDMNIKIADFGFSN-EFTVGNKLDTFCG 175
Query: 541 TPQWMAPEVLRSEPSN-EKSDVFSFGVILWELVTASIPWNNLNLMQV 586
+P + APE+ + + + + DV+S GVIL+ LV+ S+P++ NL ++
Sbjct: 176 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 222
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 83
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL---------DIKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L A+ + + ++M
Sbjct: 84 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 143
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N +V +++TVK+GDFG++ T K G+G
Sbjct: 144 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 201
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 261
Query: 596 RLELPEGL 603
P+ L
Sbjct: 262 PDNCPDML 269
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM YL
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 149
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTA--KSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ + + Y + K+G P +WMA E
Sbjct: 150 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 259
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 29/212 (13%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK--LRHPNVLL 439
L E IG G + V+RG W G +VAVK++ E +++ +E +I + LRH N+L
Sbjct: 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----RSWFREAEIYQTVMLRHENILG 61
Query: 440 FMGA----VASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
F+ A + +L +V+++ GSLF L N + ++ +++AL A G+ +LH
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 496 ------NPPIVHRDLKSSNLLVDKNWTVKVGDFGLS----SLKNATYLTAKSGRGTPQWM 545
P I HRDLKS N+LV KN T + D GL+ S + + GT ++M
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 546 APEVL------RSEPSNEKSDVFSFGVILWEL 571
APEVL + S +++D+++ G++ WE+
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 29/212 (13%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK--LRHPNVLL 439
L E IG G + V+RG W G +VAVK++ E +++ +E +I + LRH N+L
Sbjct: 46 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-----RSWFREAEIYQTVMLRHENILG 100
Query: 440 FMGA----VASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
F+ A + +L +V+++ GSLF L N + ++ +++AL A G+ +LH
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 496 ------NPPIVHRDLKSSNLLVDKNWTVKVGDFGLS----SLKNATYLTAKSGRGTPQWM 545
P I HRDLKS N+LV KN T + D GL+ S + + GT ++M
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 546 APEVL------RSEPSNEKSDVFSFGVILWEL 571
APEVL + S +++D+++ G++ WE+
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 24 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM YL
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 142
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTA--KSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ + + Y + K+G P +WMA E
Sbjct: 143 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 252
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ ++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ EFLP GSL + L K+ + +D + L+ + +GM YL
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 135 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 29 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM YL
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 147
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTA--KSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ + + Y + K+G P +WMA E
Sbjct: 148 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 257
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM YL
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 150
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTA--KSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ + + Y + K+G P +WMA E
Sbjct: 151 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 260
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 15 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 73
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL---------DIKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L A+ + + ++M
Sbjct: 74 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 133
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N +V +++TVK+GDFG++ T K G+G
Sbjct: 134 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 191
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 192 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 251
Query: 596 RLELPEGL 603
P+ L
Sbjct: 252 PDNCPDML 259
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 51 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM YL
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 169
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTA--KSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ + + Y + K+G P +WMA E
Sbjct: 170 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 279
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 72
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTPQ-WMAPEVL 550
+ +HR+L + N+LV+ VK+GDFGL+ + ++ Y K +P W APE L
Sbjct: 133 TKR--YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 385 EIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAV 444
E+G G++ VY+ + V E L++Y EIDI+ HPN++ + A
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 445 ASQERLGIVTEFLPRGSL---FKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ L I+ EF G++ L + I+ + LD +NYLH I+H
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNK--IIH 158
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSE-----PSN 556
RDLK+ N+L + +K+ DFG+S+ T S GTP WMAPEV+ E P +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 557 EKSDVFSFGVILWELVTASIPWNNLNLMQVV 587
K+DV+S G+ L E+ P + LN M+V+
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHELNPMRVL 249
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 77
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L ++ + + ++M
Sbjct: 78 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 137
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N +V +++TVK+GDFG++ T K G+G
Sbjct: 138 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGL 195
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 255
Query: 596 RLELPEGL 603
P+ L
Sbjct: 256 PDNCPDML 263
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 10 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 68
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L ++ + + ++M
Sbjct: 69 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 128
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N +V +++TVK+GDFG++ T K G+G
Sbjct: 129 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGL 186
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 187 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 246
Query: 596 RLELPEGL 603
P+ L
Sbjct: 247 PDNCPDML 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 8/175 (4%)
Query: 404 VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLF 463
VA+K S Y E +++ E I+ + HPNV+ G V + I+TEF+ GSL
Sbjct: 38 VAIKT-LKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 464 KTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFG 523
L +N + + + M +A GM YL N VHR L + N+LV+ N KV DFG
Sbjct: 97 SFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--YVHRALAARNILVNSNLVCKVSDFG 154
Query: 524 LSSL-----KNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
LS + TY +A G+ +W APE ++ SDV+S+G+++WE+++
Sbjct: 155 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM YL
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 149
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ K + K+G P +WMA E
Sbjct: 150 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 259
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 26/218 (11%)
Query: 377 WEDLQLGEEIGLGSYAVVYRGIWNGS----DVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
W D++ + IG G++ V + D A+K EY + +++ E++++ K
Sbjct: 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCK 81
Query: 432 L-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN---------------YQALDI 475
L HPN++ +GA + L + E+ P G+L L K+ L
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 476 KRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTA 535
++ L A DVARGM+YL + +HRDL + N+LV +N+ K+ DFGLS Y+
Sbjct: 142 QQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFGLSR-GQEVYVKK 198
Query: 536 KSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
GR +WMA E L SDV+S+GV+LWE+V+
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 8/206 (3%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEY-IEGTLKNYQKEIDIIKKLRH 434
+D + +G G + VY R N +A+KV F S+ EG ++EI+I LRH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L ++R+ ++ EF PRG L+K L K+ + D +R ++A ++Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCHE 132
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
R ++HRD+K NLL+ +K+ DFG S +A L + GT ++ PE++ +
Sbjct: 133 RK--VIHRDIKPENLLMGYKGELKIADFGWSV--HAPSLRRRXMCGTLDYLPPEMIEGKT 188
Query: 555 SNEKSDVFSFGVILWELVTASIPWNN 580
+EK D++ GV+ +E + P+++
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 102
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 163 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 29/214 (13%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK--LRHPNV 437
+ L E +G G Y V+RG W G +VAVK++ + K++ +E ++ LRH N+
Sbjct: 39 ITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDE-----KSWFRETELYNTVMLRHENI 93
Query: 438 LLF----MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
L F M + S +L ++T + GSL+ L LD LR+ L +A G+ +LH
Sbjct: 94 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAHLH 151
Query: 494 ------HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR----GTPQ 543
P I HRDLKS N+LV KN + D GL+ + + + G GT +
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 544 WMAPEVLRSE------PSNEKSDVFSFGVILWEL 571
+MAPEVL S ++ D+++FG++LWE+
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 83
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L ++ + + ++M
Sbjct: 84 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 143
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N +V +++TVK+GDFG++ T K G+G
Sbjct: 144 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 201
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 261
Query: 596 RLELPEGL 603
P+ L
Sbjct: 262 PDNCPDML 269
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 26/218 (11%)
Query: 377 WEDLQLGEEIGLGSYAVVYRGIWNGS----DVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
W D++ + IG G++ V + D A+K EY + +++ E++++ K
Sbjct: 14 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCK 71
Query: 432 L-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN---------------YQALDI 475
L HPN++ +GA + L + E+ P G+L L K+ L
Sbjct: 72 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 476 KRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTA 535
++ L A DVARGM+YL + +HRDL + N+LV +N+ K+ DFGLS Y+
Sbjct: 132 QQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFGLSR-GQEVYVKK 188
Query: 536 KSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
GR +WMA E L SDV+S+GV+LWE+V+
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 125/231 (54%), Gaps = 16/231 (6%)
Query: 363 GDNETSCATDGGIRWEDLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLK 420
G++ SCA D + +L + IG G++A V R I G +VA+K+ ++ +L+
Sbjct: 1 GNSIASCA-DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ 59
Query: 421 NYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRR 478
+E+ I+K L HPN++ + +++ L ++ E+ G +F L H + + + +
Sbjct: 60 KLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK 119
Query: 479 LRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK-- 536
R + + Y H + IVHRDLK+ NLL+D + +K+ DFG S N + K
Sbjct: 120 FR---QIVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLD 171
Query: 537 SGRGTPQWMAPEVLRSEPSN-EKSDVFSFGVILWELVTASIPWNNLNLMQV 586
+ G P + APE+ + + + + DV+S GVIL+ LV+ S+P++ NL ++
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 222
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 77
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 138 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 135 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 132 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 76
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 137 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 78
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 139 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 77
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L ++ + + ++M
Sbjct: 78 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 137
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N +V +++TVK+GDFG++ T K G+G
Sbjct: 138 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 195
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 255
Query: 596 RLELPEGL 603
P+ L
Sbjct: 256 PDNCPDML 263
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH 434
+++ E IG G + V RG S VA+K G Y E + + E I+ + H
Sbjct: 16 VKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG-YTERQRREFLSEASIMGQFEH 74
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN++ G V + + I+TEF+ G+L L N + + + M +A GM YL
Sbjct: 75 PNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE 134
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL-----KNATYLTAKSGRGTPQWMAPEV 549
+ VHRDL + N+LV+ N KV DFGLS + TY ++ G+ +W APE
Sbjct: 135 MS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 550 LRSEPSNEKSDVFSFGVILWELVT 573
+ SD +S+G+++WE+++
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 16 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 74
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L ++ + + ++M
Sbjct: 75 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 134
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N +V +++TVK+GDFG++ T K G+G
Sbjct: 135 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 252
Query: 596 RLELPEGL 603
P+ L
Sbjct: 253 PDNCPDML 260
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 70
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L ++ + + ++M
Sbjct: 71 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 130
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N +V +++TVK+GDFG++ T K G+G
Sbjct: 131 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 188
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 248
Query: 596 RLELPEGL 603
P+ L
Sbjct: 249 PDNCPDML 256
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 69
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 130 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 75
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 136 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 110/193 (56%), Gaps = 5/193 (2%)
Query: 384 EEIGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
++IG GS+ A++ + +G +K S + ++E+ ++ ++HPN++ +
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRR-LRMALDVARGMNYLHHRNPPIV 500
+ L IV ++ G LFK ++ L + + L + + + ++H R I+
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--IL 147
Query: 501 HRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
HRD+KS N+ + K+ TV++GDFG++ + N+T A++ GTP +++PE+ ++P N KSD
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSD 207
Query: 561 VFSFGVILWELVT 573
+++ G +L+EL T
Sbjct: 208 IWALGCVLYELCT 220
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 70
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 131 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 132 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 29/214 (13%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK--LRHPNV 437
+ L E +G G Y V+RG W G +VAVK++ + K++ +E ++ LRH N+
Sbjct: 10 ITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDE-----KSWFRETELYNTVMLRHENI 64
Query: 438 LLF----MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
L F M + S +L ++T + GSL+ L LD LR+ L +A G+ +LH
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAHLH 122
Query: 494 ------HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR----GTPQ 543
P I HRDLKS N+LV KN + D GL+ + + + G GT +
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 544 WMAPEVLRSE------PSNEKSDVFSFGVILWEL 571
+MAPEVL S ++ D+++FG++LWE+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 76
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L ++ + + ++M
Sbjct: 77 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N +V +++TVK+GDFG++ T K G+G
Sbjct: 137 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 254
Query: 596 RLELPEGL 603
P+ L
Sbjct: 255 PDNCPDML 262
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 150 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 76
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L ++ + + ++M
Sbjct: 77 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N +V +++TVK+GDFG++ T K G+G
Sbjct: 137 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 254
Query: 596 RLELPEGL 603
P+ L
Sbjct: 255 PDNCPDML 262
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L K+ + +D + L+ + +GM YL
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 150 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 29/219 (13%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK--LRHPNV 437
+ L E +G G Y V+RG+W+G VAVK++ + +++ +E +I LRH N+
Sbjct: 10 VALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDE-----QSWFRETEIYNTVLLRHDNI 64
Query: 438 LLF----MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
L F M + S +L ++T + GSL+ L + Q L+ LR+A+ A G+ +LH
Sbjct: 65 LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR--QTLEPHLALRLAVSAACGLAHLH 122
Query: 494 ------HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSG--RGTPQ 543
P I HRD KS N+LV N + D GL+ + + + YL + GT +
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKR 182
Query: 544 WMAPEVLRSE------PSNEKSDVFSFGVILWELVTASI 576
+MAPEVL + S + +D+++FG++LWE+ +I
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTI 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 7/239 (2%)
Query: 368 SCATDGGIRWEDLQLGEEIGLGSYAVVYRG--IWNGSDVAVKVY-FGSEYIEGTLKNYQK 424
S AT G + ED ++G +G GS+A VYR I G +VA+K+ + Y G ++ Q
Sbjct: 1 SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E+ I +L+HP++L + +V E G + + L +
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
+ GM YLH I+HRDL SNLL+ +N +K+ DFGL++ + + GTP +
Sbjct: 121 IITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNY 178
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGL 603
++PE+ +SDV+S G + + L+ P++ + + V D E+P L
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD--YEMPSFL 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 47 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 105
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L ++ + + ++M
Sbjct: 106 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 165
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N +V +++TVK+GDFG++ T K G+G
Sbjct: 166 AGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 223
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 224 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 283
Query: 596 RLELPEGL 603
P+ L
Sbjct: 284 PDNCPDML 291
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 117/214 (54%), Gaps = 13/214 (6%)
Query: 379 DLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
+ +L + IG G++A V R I G +VAVK+ ++ +L+ +E+ I+K L HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHH 494
++ + +++ L +V E+ G +F L H + + + + R + + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ 131
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSE 553
+ IVHRDLK+ NLL+D + +K+ DFG S+ L A G P + APE+ + +
Sbjct: 132 KF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC--GAPPYAAPELFQGK 187
Query: 554 PSN-EKSDVFSFGVILWELVTASIPWNNLNLMQV 586
+ + DV+S GVIL+ LV+ S+P++ NL ++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 385 EIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAV 444
E+G G++ VY+ + V E L++Y EIDI+ HPN++ + A
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 445 ASQERLGIVTEFLPRGSL---FKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ L I+ EF G++ L + I+ + LD +NYLH I+H
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNK--IIH 158
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSE-----PSN 556
RDLK+ N+L + +K+ DFG+S+ S GTP WMAPEV+ E P +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 557 EKSDVFSFGVILWELVTASIPWNNLNLMQVV 587
K+DV+S G+ L E+ P + LN M+V+
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHELNPMRVL 249
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 91 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM +L
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 209
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ K + K+G P +WMA E
Sbjct: 210 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 319
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 118/215 (54%), Gaps = 15/215 (6%)
Query: 379 DLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
+ +L + IG G++A V R I G +VAVK+ ++ +L+ +E+ I+K L HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHH 494
++ + +++ L +V E+ G +F L H + + + + R + + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ 131
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK--SGRGTPQWMAPEVLRS 552
+ IVHRDLK+ NLL+D + +K+ DFG S N K + G+P + APE+ +
Sbjct: 132 KF--IVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 553 EPSN-EKSDVFSFGVILWELVTASIPWNNLNLMQV 586
+ + + DV+S GVIL+ LV+ S+P++ NL ++
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 118/213 (55%), Gaps = 15/213 (7%)
Query: 381 QLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL 438
+L + IG G++A V R I G +VA+K+ ++ +L+ +E+ I+K L HPN++
Sbjct: 15 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 74
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHHRN 496
+ +++ L ++ E+ G +F L H + + + + R + + Y H +
Sbjct: 75 KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQKR 131
Query: 497 PPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK--SGRGTPQWMAPEVLRSEP 554
IVHRDLK+ NLL+D + +K+ DFG S N + K + G+P + APE+ + +
Sbjct: 132 --IVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 555 SN-EKSDVFSFGVILWELVTASIPWNNLNLMQV 586
+ + DV+S GVIL+ LV+ S+P++ NL ++
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 219
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 116/209 (55%), Gaps = 7/209 (3%)
Query: 384 EEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E+IG GS+ V++GI N + VA+K+ E E +++ Q+EI ++ + P V +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
G+ +L I+ E+L GS L LD + + ++ +G++YLH +H
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKK--IH 147
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
RD+K++N+L+ ++ VK+ DFG++ T + + GTP WMAPEV++ + K+D+
Sbjct: 148 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 207
Query: 562 FSFGVILWELVTASIPWNNLNLMQVVGVV 590
+S G+ EL P + L+ M+V+ ++
Sbjct: 208 WSLGITAIELARGEPPHSELHPMKVLFLI 236
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 118/228 (51%), Gaps = 16/228 (7%)
Query: 376 RWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQK-----EIDIIK 430
R ED ++ IG GSY + I SD + V+ +Y G++ +K E+++++
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQK-IRRKSDGKILVWKELDY--GSMTEAEKQMLVSEVNLLR 60
Query: 431 KLRHPNVLLFMGAVA--SQERLGIVTEFLPRGSLFKTLHK---NYQALDIKRRLRMALDV 485
+L+HPN++ + + + L IV E+ G L + K Q LD + LR+ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 486 ARGMNYLHHRNP---PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP 542
+ H R+ ++HRDLK +N+ +D VK+GDFGL+ + N AK+ GTP
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTP 180
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
+M+PE + NEKSD++S G +L+EL P+ + ++ G +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM +L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 150
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ K + K+G P +WMA E
Sbjct: 151 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 260
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL-----KNYQKEIDIIKKLRHPNVLLF 440
+G G++ VY+GIW VK+ + + T + E I+ + HP+++
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
+G S + +VT+ +P G L + +H++ + + L + +A+GM YL R +V
Sbjct: 83 LGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LV 139
Query: 501 HRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
HRDL + N+LV VK+ DFGL+ L + A G+ +WMA E + +
Sbjct: 140 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 199
Query: 559 SDVFSFGVILWELVT 573
SDV+S+GV +WEL+T
Sbjct: 200 SDVWSYGVTIWELMT 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 118/215 (54%), Gaps = 15/215 (6%)
Query: 379 DLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
+ +L + IG G++A V R I G +VAVK+ ++ +L+ +E+ I+K L HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHH 494
++ + +++ L +V E+ G +F L H + + + + R + + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ 131
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK--SGRGTPQWMAPEVLRS 552
+ IVHRDLK+ NLL+D + +K+ DFG S N K + G+P + APE+ +
Sbjct: 132 KF--IVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 553 EPSN-EKSDVFSFGVILWELVTASIPWNNLNLMQV 586
+ + + DV+S GVIL+ LV+ S+P++ NL ++
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 37 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM +L
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 155
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ K + K+G P +WMA E
Sbjct: 156 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 265
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM +L
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 151
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ K + K+G P +WMA E
Sbjct: 152 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 261
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 116/209 (55%), Gaps = 7/209 (3%)
Query: 384 EEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E+IG GS+ V++GI N + VA+K+ E E +++ Q+EI ++ + P V +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
G+ +L I+ E+L GS L LD + + ++ +G++YLH +H
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKK--IH 127
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
RD+K++N+L+ ++ VK+ DFG++ T + + GTP WMAPEV++ + K+D+
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 562 FSFGVILWELVTASIPWNNLNLMQVVGVV 590
+S G+ EL P + L+ M+V+ ++
Sbjct: 188 WSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 118/228 (51%), Gaps = 16/228 (7%)
Query: 376 RWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQK-----EIDIIK 430
R ED ++ IG GSY + I SD + V+ +Y G++ +K E+++++
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQK-IRRKSDGKILVWKELDY--GSMTEAEKQMLVSEVNLLR 60
Query: 431 KLRHPNVLLFMGAVA--SQERLGIVTEFLPRGSLFKTLHK---NYQALDIKRRLRMALDV 485
+L+HPN++ + + + L IV E+ G L + K Q LD + LR+ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 486 ARGMNYLHHRNP---PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP 542
+ H R+ ++HRDLK +N+ +D VK+GDFGL+ + N AK+ GTP
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTP 180
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
+M+PE + NEKSD++S G +L+EL P+ + ++ G +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 26/218 (11%)
Query: 377 WEDLQLGEEIGLGSYAVVYRGIWNGS----DVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
W D++ + IG G++ V + D A+K EY + +++ E++++ K
Sbjct: 21 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCK 78
Query: 432 L-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN---------------YQALDI 475
L HPN++ +GA + L + E+ P G+L L K+ L
Sbjct: 79 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 476 KRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTA 535
++ L A DVARGM+YL + +HR+L + N+LV +N+ K+ DFGLS Y+
Sbjct: 139 QQLLHFAADVARGMDYLSQKQ--FIHRNLAARNILVGENYVAKIADFGLSR-GQEVYVKK 195
Query: 536 KSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
GR +WMA E L SDV+S+GV+LWE+V+
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLK-----NYQKEIDIIKKLRHPNVLLF 440
+G G++ VY+GIW VK+ + + T + E I+ + HP+++
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
+G S + +VT+ +P G L + +H++ + + L + +A+GM YL R +V
Sbjct: 106 LGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LV 162
Query: 501 HRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
HRDL + N+LV VK+ DFGL+ L + A G+ +WMA E + +
Sbjct: 163 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 222
Query: 559 SDVFSFGVILWELVT 573
SDV+S+GV +WEL+T
Sbjct: 223 SDVWSYGVTIWELMT 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM +L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 150
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ K + K+G P +WMA E
Sbjct: 151 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 260
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM +L
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 151
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ K + K+G P +WMA E
Sbjct: 152 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 261
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 25/248 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + + E+G GS+ +VY G+ G + VA+K + + ++ + E ++K
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLNEASVMK 70
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+ +V+ +G V+ + ++ E + RG L L ++ + + ++M
Sbjct: 71 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 130
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ VHRDL + N V +++TVK+GDFG++ T K G+G
Sbjct: 131 AGEIADGMAYLNANK--FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 188
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WM+PE L+ SDV+SFGV+LWE+ T A P+ L+ QV+ V G +D+
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 248
Query: 596 RLELPEGL 603
P+ L
Sbjct: 249 PDNCPDML 256
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE-----GTLKNYQKEIDIIKKLRH 434
+ E IG G + VY G +D K++ + + G + + E I+K H
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 435 PNVLLFMG-AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
PNVL +G + S+ +V ++ G L + +K + L VA+GM +L
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 148
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTP-QWMAPEV 549
+ VHRDL + N ++D+ +TVKV DFGL+ K + K+G P +WMA E
Sbjct: 149 SKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 550 LRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
L+++ KSDV+SFGV+LWEL+T + P+ ++N + V RRL PE
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-VYLLQGRRLLQPE 258
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 380 LQLGEEIGLGSYAVV----YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
L+ +++G G++ V Y + + + V V E L+++++EI+I+K L+H
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 436 NVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
N++ + G S R L ++ E+LP GSL L + + +D + L+ + +GM YL
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL 550
+ +HRDL + N+LV+ VK+GDFGL+ + + G W APE L
Sbjct: 135 TKR--YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 551 RSEPSNEKSDVFSFGVILWELVT 573
+ SDV+SFGV+L+EL T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
Query: 384 EEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E+IG GS+ V++GI N + VA+K+ E E +++ Q+EI ++ + P V +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
G+ +L I+ E+L GS L LD + + ++ +G++YLH +H
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKK--IH 142
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
RD+K++N+L+ ++ VK+ DFG++ T + GTP WMAPEV++ + K+D+
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 202
Query: 562 FSFGVILWELVTASIPWNNLNLMQVVGVV 590
+S G+ EL P + L+ M+V+ ++
Sbjct: 203 WSLGITAIELARGEPPHSELHPMKVLFLI 231
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 374 GIRWEDLQLGEEIGLGSYAVVYRGIW-NGSDVAVKVYFGSEYIEGTLKNYQK---EIDII 429
GI ED+ L +G G + VY G++ N + V + + TL N +K E I+
Sbjct: 20 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 79
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGM 489
K L HP+++ +G + +E I+ E P G L L +N +L + + +L + + M
Sbjct: 80 KNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 138
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPE 548
YL N VHRD+ N+LV VK+GDFGLS +++ Y A R +WM+PE
Sbjct: 139 AYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 549 VLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDR 595
+ SDV+ F V +WE+++ P+ L V+GV+ DR
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR 244
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 379 DLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
+ +L + IG G++A V R I G +VAVK+ ++ +L+ +E+ I K L HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHH 494
++ + +++ L +V E+ G +F L H + + + + R + + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ---IVSAVQYCHQ 131
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSE 553
+ IVHRDLK+ NLL+D + +K+ DFG S+ L A G P + APE+ + +
Sbjct: 132 KF--IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC--GAPPYAAPELFQGK 187
Query: 554 PSN-EKSDVFSFGVILWELVTASIPWNNLNLMQV 586
+ + DV+S GVIL+ LV+ S+P++ NL ++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 117/215 (54%), Gaps = 15/215 (6%)
Query: 379 DLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
+ +L + IG G++A V R I G +VAV++ ++ +L+ +E+ I+K L HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHH 494
++ + +++ L +V E+ G +F L H + + + + R + + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ 131
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ IVHRDLK+ NLL+D + +K+ DFG S N K G+P + APE+ +
Sbjct: 132 KF--IVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDEFCGSPPYAAPELFQG 186
Query: 553 EPSN-EKSDVFSFGVILWELVTASIPWNNLNLMQV 586
+ + + DV+S GVIL+ LV+ S+P++ NL ++
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 118/215 (54%), Gaps = 15/215 (6%)
Query: 379 DLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
+ +L + IG G++A V R I G +VAV++ ++ +L+ +E+ I+K L HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHH 494
++ + +++ L +V E+ G +F L H + + + + R + + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ 131
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK--SGRGTPQWMAPEVLRS 552
+ IVHRDLK+ NLL+D + +K+ DFG S N K + G+P + APE+ +
Sbjct: 132 KF--IVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 553 EPSN-EKSDVFSFGVILWELVTASIPWNNLNLMQV 586
+ + + DV+S GVIL+ LV+ S+P++ NL ++
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 115/230 (50%), Gaps = 13/230 (5%)
Query: 374 GIRWEDLQLGEEIGLGSYAVVYRGIWN---GSDVAVKVYFGSEYIEGTLKNYQK---EID 427
GI ED+ L +G G + VY G++ G + V V + + TL N +K E
Sbjct: 4 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK--DCTLDNKEKFMSEAV 61
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I+K L HP+++ +G + +E I+ E P G L L +N +L + + +L + +
Sbjct: 62 IMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK 120
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMA 546
M YL N VHRD+ N+LV VK+GDFGLS +++ Y A R +WM+
Sbjct: 121 AMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 178
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDR 595
PE + SDV+ F V +WE+++ P+ L V+GV+ DR
Sbjct: 179 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR 228
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 123/244 (50%), Gaps = 10/244 (4%)
Query: 368 SCATDGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIEGTLK-NYQ 423
S D I+ E ++LG IG G + V++GI+ + +AV + +++ +
Sbjct: 5 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 64
Query: 424 KEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMAL 483
+E +++ HP+++ +G V ++ + I+ E G L L +LD+ + A
Sbjct: 65 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 123
Query: 484 DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTP 542
++ + YL + VHRD+ + N+LV N VK+GDFGLS ++++TY A G+
Sbjct: 124 QLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 181
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPE 601
+WMAPE + SDV+ FGV +WE++ + P+ + V+G + RL +P
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPP 240
Query: 602 GLDP 605
P
Sbjct: 241 NCPP 244
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 123/244 (50%), Gaps = 10/244 (4%)
Query: 368 SCATDGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIEGTLK-NYQ 423
S D I+ E ++LG IG G + V++GI+ + +AV + +++ +
Sbjct: 28 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 87
Query: 424 KEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMAL 483
+E +++ HP+++ +G V ++ + I+ E G L L +LD+ + A
Sbjct: 88 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 146
Query: 484 DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTP 542
++ + YL + VHRD+ + N+LV N VK+GDFGLS ++++TY A G+
Sbjct: 147 QLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 204
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPE 601
+WMAPE + SDV+ FGV +WE++ + P+ + V+G + RL +P
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPP 263
Query: 602 GLDP 605
P
Sbjct: 264 NCPP 267
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 374 GIRWEDLQLGEEIGLGSYAVVYRGIW-NGSDVAVKVYFGSEYIEGTLKNYQK---EIDII 429
GI ED+ L +G G + VY G++ N + V + + TL N +K E I+
Sbjct: 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGM 489
K L HP+++ +G + +E I+ E P G L L +N +L + + +L + + M
Sbjct: 68 KNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 126
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPE 548
YL N VHRD+ N+LV VK+GDFGLS +++ Y A R +WM+PE
Sbjct: 127 AYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 549 VLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDR 595
+ SDV+ F V +WE+++ P+ L V+GV+ DR
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR 232
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 122/240 (50%), Gaps = 10/240 (4%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIEGTLK-NYQKEID 427
D I+ E ++LG IG G + V++GI+ + +AV + +++ + +E
Sbjct: 7 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ HP+++ +G V ++ + I+ E G L L +LD+ + A ++
Sbjct: 67 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 125
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMA 546
+ YL + VHRD+ + N+LV N VK+GDFGLS ++++TY A G+ +WMA
Sbjct: 126 ALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 183
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PE + SDV+ FGV +WE++ + P+ + V+G + RL +P P
Sbjct: 184 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPP 242
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 117/228 (51%), Gaps = 16/228 (7%)
Query: 376 RWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQK-----EIDIIK 430
R ED ++ IG GSY + I SD + V+ +Y G++ +K E+++++
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQK-IRRKSDGKILVWKELDY--GSMTEAEKQMLVSEVNLLR 60
Query: 431 KLRHPNVLLFMGAVA--SQERLGIVTEFLPRGSLFKTLHK---NYQALDIKRRLRMALDV 485
+L+HPN++ + + + L IV E+ G L + K Q LD + LR+ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 486 ARGMNYLHHRNP---PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP 542
+ H R+ ++HRDLK +N+ +D VK+GDFGL+ + N AK GTP
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTP 180
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
+M+PE + NEKSD++S G +L+EL P+ + ++ G +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 122/240 (50%), Gaps = 10/240 (4%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIEGTLK-NYQKEID 427
D I+ E ++LG IG G + V++GI+ + +AV + +++ + +E
Sbjct: 6 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ HP+++ +G V ++ + I+ E G L L +LD+ + A ++
Sbjct: 66 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 124
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMA 546
+ YL + VHRD+ + N+LV N VK+GDFGLS ++++TY A G+ +WMA
Sbjct: 125 ALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 182
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PE + SDV+ FGV +WE++ + P+ + V+G + RL +P P
Sbjct: 183 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPP 241
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
Query: 384 EEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E+IG GS+ V++GI N + VA+K+ E E +++ Q+EI ++ + P V +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
G+ +L I+ E+L GS L LD + + ++ +G++YLH +H
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKK--IH 127
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
RD+K++N+L+ ++ VK+ DFG++ T + GTP WMAPEV++ + K+D+
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 562 FSFGVILWELVTASIPWNNLNLMQVVGVV 590
+S G+ EL P + L+ M+V+ ++
Sbjct: 188 WSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 385 EIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAV 444
E+G G++ VY+ + V E L++Y EIDI+ HPN++ + A
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 445 ASQERLGIVTEFLPRG---SLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ L I+ EF G ++ L + I+ + LD +NYLH I+H
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNK--IIH 158
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSE-----PSN 556
RDLK+ N+L + +K+ DFG+S+ GTP WMAPEV+ E P +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 557 EKSDVFSFGVILWELVTASIPWNNLNLMQVV 587
K+DV+S G+ L E+ P + LN M+V+
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHELNPMRVL 249
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 126/251 (50%), Gaps = 25/251 (9%)
Query: 373 GGIRWEDLQLGEEIGLGSYAVVYRG----IWNG---SDVAVKVYFGSEYIEGTLKNYQKE 425
G + E + L E+G GS+ +VY G I G + VAVK S + ++ + E
Sbjct: 11 GEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNE 69
Query: 426 IDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IK 476
++K +V+ +G V+ + +V E + G L L + ++
Sbjct: 70 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 129
Query: 477 RRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK 536
++MA ++A GM YL+ + VHRDL + N +V ++TVK+GDFG++ T K
Sbjct: 130 EMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK 187
Query: 537 SGRGT--PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--- 590
G+G +WMAPE L+ SD++SFGV+LWE+ + A P+ L+ QV+ V
Sbjct: 188 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 247
Query: 591 GFMDRRLELPE 601
G++D+ PE
Sbjct: 248 GYLDQPDNCPE 258
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 122/240 (50%), Gaps = 10/240 (4%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIEGTLK-NYQKEID 427
D I+ E ++LG IG G + V++GI+ + +AV + +++ + +E
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ HP+++ +G V ++ + I+ E G L L +LD+ + A ++
Sbjct: 61 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMA 546
+ YL + VHRD+ + N+LV N VK+GDFGLS ++++TY A G+ +WMA
Sbjct: 120 ALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 177
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PE + SDV+ FGV +WE++ + P+ + V+G + RL +P P
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPP 236
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 122/240 (50%), Gaps = 10/240 (4%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIEGTLK-NYQKEID 427
D I+ E ++LG IG G + V++GI+ + +AV + +++ + +E
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ HP+++ +G V ++ + I+ E G L L +LD+ + A ++
Sbjct: 64 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMA 546
+ YL + VHRD+ + N+LV N VK+GDFGLS ++++TY A G+ +WMA
Sbjct: 123 ALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PE + SDV+ FGV +WE++ + P+ + V+G + RL +P P
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPP 239
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ PRG ++K L K D +R ++A ++Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQK-LSKFDEQRTATYITELANALSYCHS 131
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 132 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 187
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 122/240 (50%), Gaps = 10/240 (4%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIEGTLK-NYQKEID 427
D I+ E ++LG IG G + V++GI+ + +AV + +++ + +E
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ HP+++ +G V ++ + I+ E G L L +LD+ + A ++
Sbjct: 64 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMA 546
+ YL + VHRD+ + N+LV N VK+GDFGLS ++++TY A G+ +WMA
Sbjct: 123 ALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PE + SDV+ FGV +WE++ + P+ + V+G + RL +P P
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPP 239
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH 434
+++ E IG G + V RG S VA+K G Y E + + E I+ + H
Sbjct: 18 VKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGG-YTERQRREFLSEASIMGQFEH 76
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN++ G V + + I+TEF+ G+L L N + + + M +A GM YL
Sbjct: 77 PNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE 136
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL-----KNATYLTAKSGRGTPQWMAPEV 549
+ VHRDL + N+LV+ N KV DFGLS + T ++ G+ +W APE
Sbjct: 137 MS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 550 LRSEPSNEKSDVFSFGVILWELVT 573
+ SD +S+G+++WE+++
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 122/240 (50%), Gaps = 10/240 (4%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIEGTLK-NYQKEID 427
D I+ E ++LG IG G + V++GI+ + +AV + +++ + +E
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ HP+++ +G V ++ + I+ E G L L +LD+ + A ++
Sbjct: 444 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMA 546
+ YL + VHRD+ + N+LV N VK+GDFGLS ++++TY A G+ +WMA
Sbjct: 503 ALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 560
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PE + SDV+ FGV +WE++ + P+ + V+G + RL +P P
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPP 619
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRG----IWNG---SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + L E+G GS+ +VY G I G + VAVK S + ++ + E ++K
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMK 72
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+V+ +G V+ + +V E + G L L + ++ ++M
Sbjct: 73 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 132
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ + VHRDL + N +V ++TVK+GDFG++ T K G+G
Sbjct: 133 AAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL 190
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WMAPE L+ SD++SFGV+LWE+ + A P+ L+ QV+ V G++D+
Sbjct: 191 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 250
Query: 596 RLELPE 601
PE
Sbjct: 251 PDNCPE 256
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRG----IWNG---SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + L E+G GS+ +VY G I G + VAVK S + ++ + E ++K
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMK 75
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+V+ +G V+ + +V E + G L L + ++ ++M
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ + VHRDL + N +V ++TVK+GDFG++ T K G+G
Sbjct: 136 AAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WMAPE L+ SD++SFGV+LWE+ + A P+ L+ QV+ V G++D+
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 596 RLELPE 601
PE
Sbjct: 254 PDNCPE 259
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRG----IWNG---SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + L E+G GS+ +VY G I G + VAVK S + ++ + E ++K
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMK 75
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+V+ +G V+ + +V E + G L L + ++ ++M
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ + VHRDL + N +V ++TVK+GDFG++ T K G+G
Sbjct: 136 AAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WMAPE L+ SD++SFGV+LWE+ + A P+ L+ QV+ V G++D+
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 596 RLELPE 601
PE
Sbjct: 254 PDNCPE 259
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 15/214 (7%)
Query: 384 EEIG-LGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
E IG LG + VY+ + V E L++Y EIDI+ HPN++ +
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 443 AVASQERLGIVTEFLPRGSL---FKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
A + L I+ EF G++ L + I+ + LD +NYLH I
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNK--I 129
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK-SGRGTPQWMAPEVLRSE----- 553
+HRDLK+ N+L + +K+ DFG+S+ T + + S GTP WMAPEV+ E
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 554 PSNEKSDVFSFGVILWELVTASIPWNNLNLMQVV 587
P + K+DV+S G+ L E+ P + LN M+V+
Sbjct: 190 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL 223
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 117/213 (54%), Gaps = 15/213 (7%)
Query: 381 QLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL 438
+L + IG G++A V R I G +VAVK+ ++ +L+ +E+ I+K L HPN++
Sbjct: 10 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 69
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHHRN 496
+ +++ L +V E+ G +F L H + + + + R + + Y H +
Sbjct: 70 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---QIVSAVQYCHQKF 126
Query: 497 PPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK--SGRGTPQWMAPEVLRSEP 554
IVHRDLK+ NLL+D + +K+ DFG S N K + G+P + APE+ + +
Sbjct: 127 --IVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 555 SN-EKSDVFSFGVILWELVTASIPWNNLNLMQV 586
+ + DV+S GVIL+ LV+ S+P++ NL ++
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 214
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRG----IWNG---SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + L E+G GS+ +VY G I G + VAVK S + ++ + E ++K
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMK 75
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+V+ +G V+ + +V E + G L L + ++ ++M
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ + VHRDL + N +V ++TVK+GDFG++ T K G+G
Sbjct: 136 AAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGL 193
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WMAPE L+ SD++SFGV+LWE+ + A P+ L+ QV+ V G++D+
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 596 RLELPE 601
PE
Sbjct: 254 PDNCPE 259
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 11/210 (5%)
Query: 385 EIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
E+G G++ VY+ G+ A KV E L++Y EI+I+ HP ++ +G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
A +L I+ EF P G++ + + + L + + + +N+LH + I+HR
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR--IIHR 133
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSE-----PSNE 557
DLK+ N+L+ +++ DFG+S+ T S GTP WMAPEV+ E P +
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 193
Query: 558 KSDVFSFGVILWELVTASIPWNNLNLMQVV 587
K+D++S G+ L E+ P + LN M+V+
Sbjct: 194 KADIWSLGITLIEMAQIEPPHHELNPMRVL 223
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 11/210 (5%)
Query: 385 EIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
E+G G++ VY+ G+ A KV E L++Y EI+I+ HP ++ +G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
A +L I+ EF P G++ + + + L + + + +N+LH + I+HR
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR--IIHR 141
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSE-----PSNE 557
DLK+ N+L+ +++ DFG+S+ T S GTP WMAPEV+ E P +
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 201
Query: 558 KSDVFSFGVILWELVTASIPWNNLNLMQVV 587
K+D++S G+ L E+ P + LN M+V+
Sbjct: 202 KADIWSLGITLIEMAQIEPPHHELNPMRVL 231
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 10/213 (4%)
Query: 379 DLQLGEEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHP 435
+ ++ ++IG G ++ VYR + +G VA+K + ++ + + KEID++K+L HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTL-HKNYQALDIKRRL--RMALDVARGMNYL 492
NV+ + + L IV E G L + + H Q I R + + + + ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
H R ++HRD+K +N+ + VK+GD GL ++ A S GTP +M+PE +
Sbjct: 153 HSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 210
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW--NNLNL 583
N KSD++S G +L+E+ P+ + +NL
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL 243
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ PRG ++K L K D +R ++A ++Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQK-LSKFDEQRTATYITELANALSYCHS 131
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR-----GTPQWMAPEV 549
+ ++HRD+K NLL+ +K+ DFG S + A S R GT ++ PE+
Sbjct: 132 KR--VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLXGTLDYLPPEM 182
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPW 578
+ +EK D++S GV+ +E + P+
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 8/206 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEY-IEGTLKNYQKEIDIIKKLRH 434
+D ++G +G G + VY S VA+KV F S+ EG ++EI+I L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L + R+ ++ E+ PRG L+K L K+ D +R + ++A + Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC-TFDEQRTATIMEELADALMYCHG 141
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S +A L K+ GT ++ PE++
Sbjct: 142 KK--VIHRDIKPENLLLGLKGELKIADFGWSV--HAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 555 SNEKSDVFSFGVILWELVTASIPWNN 580
NEK D++ GV+ +EL+ + P+ +
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFES 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRG----IWNG---SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + L E+G GS+ +VY G I G + VAVK S + ++ + E ++K
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMK 75
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+V+ +G V+ + +V E + G L L + ++ ++M
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ + VHRDL + N +V ++TVK+GDFG++ T K G+G
Sbjct: 136 AAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WMAPE L+ SD++SFGV+LWE+ + A P+ L+ QV+ V G++D+
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 596 RLELPE 601
PE
Sbjct: 254 PDNCPE 259
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 127/234 (54%), Gaps = 25/234 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-SDVAVKVYF-GSEYIEGTLKNYQKEIDIIKKLRHP 435
E L+L +++G G + V+ +N + VAVK GS +E L E +++K L+H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLA----EANVMKTLQH- 236
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD-IKRRLRMALDVARGMNYLHH 494
+ L+ + AV ++E + I+TEF+ +GSL L + + + + + + +A GM ++
Sbjct: 237 DKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTP-QWMAPEVLRSE 553
RN +HRDL+++N+LV + K+ DFGL A+ G P +W APE +
Sbjct: 297 RN--YIHRDLRAANILVSASLVCKIADFGL----------ARVGAKFPIKWTAPEAINFG 344
Query: 554 PSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV--GF-MDRRLELPEGL 603
KSDV+SFG++L E+VT IP+ ++ +V+ + G+ M R PE L
Sbjct: 345 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL 398
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 7/159 (4%)
Query: 420 KNYQKEIDIIKKLRHPNVLLFMGAV--ASQERLGIVTEFLPRGSLFKTLHKNYQALDIKR 477
+++Q+EI I+K L ++ + G ++ L +V E+LP G L L ++ LD R
Sbjct: 57 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 116
Query: 478 RLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLT 534
L + + +GM YL R VHRDL + N+LV+ VK+ DFGL+ L Y+
Sbjct: 117 LLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
Query: 535 AKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ G+ W APE L + +SDV+SFGV+L+EL T
Sbjct: 175 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 7/159 (4%)
Query: 420 KNYQKEIDIIKKLRHPNVLLFMGAV--ASQERLGIVTEFLPRGSLFKTLHKNYQALDIKR 477
+++Q+EI I+K L ++ + G ++ L +V E+LP G L L ++ LD R
Sbjct: 69 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 128
Query: 478 RLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLT 534
L + + +GM YL R VHRDL + N+LV+ VK+ DFGL+ L Y+
Sbjct: 129 LLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 186
Query: 535 AKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ G+ W APE L + +SDV+SFGV+L+EL T
Sbjct: 187 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 106/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 127
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T S GT ++ PE++
Sbjct: 128 KR--VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS--GTLDYLPPEMIEGRM 183
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 7/159 (4%)
Query: 420 KNYQKEIDIIKKLRHPNVLLFMGAV--ASQERLGIVTEFLPRGSLFKTLHKNYQALDIKR 477
+++Q+EI I+K L ++ + G ++ L +V E+LP G L L ++ LD R
Sbjct: 56 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 115
Query: 478 RLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLT 534
L + + +GM YL R VHRDL + N+LV+ VK+ DFGL+ L Y+
Sbjct: 116 LLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 173
Query: 535 AKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ G+ W APE L + +SDV+SFGV+L+EL T
Sbjct: 174 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE++ GSL L KN
Sbjct: 62 YTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQF 121
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M ++ GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 122 TVIQLVGMLRGISAGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 179
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
A Y T + G+ +W APE + SDV+S+G+++WE+V+
Sbjct: 180 AAY-TTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 404 VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLF 463
VA+K + Y E +++ E I+ + HPN++ G V IVTE++ GSL
Sbjct: 80 VAIKA-LKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 464 KTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFG 523
L + I + + M V GM YL VHRDL + N+LVD N KV DFG
Sbjct: 139 TFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 524 LSSL----KNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWE-LVTASIPW 578
LS + +A Y T G+ +W APE + + SDV+SFGV++WE L P+
Sbjct: 197 LSRVLEDDPDAAY-TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
Query: 579 NNLNLMQVVGVV--GFMDRRLELPEG 602
N+ V+ V G+ RL P G
Sbjct: 256 WNMTNRDVISSVEEGY---RLPAPMG 278
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 10/240 (4%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIEGTLK-NYQKEID 427
D I+ E ++LG IG G + V++GI+ + +AV + +++ + +E
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ HP+++ +G V ++ + I+ E G L L +LD+ + A ++
Sbjct: 444 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMA 546
+ YL + VHRD+ + N+LV VK+GDFGLS ++++TY A G+ +WMA
Sbjct: 503 ALAYLESKR--FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 560
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PE + SDV+ FGV +WE++ + P+ + V+G + RL +P P
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPP 619
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE++ GSL L K+
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 144
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG--FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 203 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 262 AV---DEGYRLPPPMD 274
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 152
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 153 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 208
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 122/249 (48%), Gaps = 26/249 (10%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRG-IWNGSDVAVKVYFGSEYIE----GTLKNYQKEIDII 429
I+ D+ L E+G G++ V+ +N S K+ + ++ K++Q+E +++
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 71
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN------------YQA---LD 474
L+H +++ F G + L +V E++ G L K L + QA L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYL 533
+ + L +A +A GM YL ++ VHRDL + N LV N VK+GDFG+S + + Y
Sbjct: 132 LSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY 189
Query: 534 TAKSGRGTP-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVG 591
P +WM PE + +SDV+SFGVILWE+ T PW L+ +V+ +
Sbjct: 190 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT 249
Query: 592 FMDRRLELP 600
R LE P
Sbjct: 250 -QGRVLERP 257
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 15/227 (6%)
Query: 386 IGLGSYAVVYRGIW-----NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLF 440
IG G + VVY G + N A+K ++ ++ + +E +++ L HPNVL
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ-QVEAFLREGLLMRGLNHPNVLAL 87
Query: 441 MGAVASQERL-GIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + E L ++ ++ G L + + + +K + L VARGM YL +
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK--F 145
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTA---KSGRGTPQWMAPEVLRSEPS 555
VHRDL + N ++D+++TVKV DFGL+ + + Y + + R +W A E L++
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRF 205
Query: 556 NEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGFMDRRLELPE 601
KSDV+SFGV+LWEL+T + P+ +++ + + RRL PE
Sbjct: 206 TTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLPQPE 251
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE++ GSL L K+
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 144
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 203 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 262 AV---DEGYRLPPPMD 274
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE++ GSL L K+
Sbjct: 83 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 142
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 143 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 200
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 201 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 259
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 260 AV---DEGYRLPPPMD 272
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE++ GSL L K+
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 144
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 203 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 262 AV---DEGYRLPPPMD 274
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE++ GSL L K+
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 144
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 203 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 262 AV---DEGYRLPPPMD 274
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE++ GSL L K+
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 144
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 203 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 262 AV---DEGYRLPPPMD 274
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 85 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 143
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 144 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 199
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 10/240 (4%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIEGTLK-NYQKEID 427
D I+ E ++LG IG G + V++GI+ + +AV + +++ + +E
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ HP+++ +G V ++ + I+ E G L L +LD+ + A ++
Sbjct: 64 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMA 546
+ YL + VHRD+ + N+LV VK+GDFGLS ++++TY A G+ +WMA
Sbjct: 123 ALAYLESKR--FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PE + SDV+ FGV +WE++ + P+ + V+G + RL +P P
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPP 239
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 115/214 (53%), Gaps = 10/214 (4%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEG--TLKNYQKEID 427
DG ++ LG+ +G+G++ V G G VAVK+ + I + ++EI
Sbjct: 10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKI-LNRQKIRSLDVVGKIRREIQ 68
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+K RHP+++ +++ + +V E++ G LF + KN + LD K R+ +
Sbjct: 69 NLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILS 127
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
G++Y H +VHRDLK N+L+D + K+ DFGLS++ + S G+P + AP
Sbjct: 128 GVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC-GSPNYAAP 184
Query: 548 EVLRSEP-SNEKSDVFSFGVILWELVTASIPWNN 580
EV+ + + D++S GVIL+ L+ ++P+++
Sbjct: 185 EVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRG----IWNG---SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + L E+G GS+ +VY G I G + VAVK S + ++ + E ++K
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMK 76
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+V+ +G V+ + +V E + G L L + ++ ++M
Sbjct: 77 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 136
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ + VHR+L + N +V ++TVK+GDFG++ T K G+G
Sbjct: 137 AAEIADGMAYLNAKK--FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WMAPE L+ SD++SFGV+LWE+ + A P+ L+ QV+ V G++D+
Sbjct: 195 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 254
Query: 596 RLELPE 601
PE
Sbjct: 255 PDNCPE 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 152
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR-----GTPQWMAPEV 549
+ ++HRD+K NLL+ +K+ DFG S + A S R GT ++ PE+
Sbjct: 153 KR--VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPPEM 203
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPW 578
+ +EK D++S GV+ +E + P+
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE++ GSL L K+
Sbjct: 56 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 115
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 174 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 232
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 233 AV---DEGYRLPPPMD 245
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 380 LQLGEEIGLGSYAVVYRG---IWNGSDVAVKV-YFGSEYIEGTLKNYQKEIDIIKKLRHP 435
+++ + IG+G + V G + ++ V + + Y + +++ E I+ + HP
Sbjct: 31 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 90
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
N++ G V + + I+TE++ GSL L KN + + + M + GM YL
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 150
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KNATYLTAKSGRGTPQWMAPEVLR 551
+ VHRDL + N+LV+ N KV DFG+S + A Y T + G+ +W APE +
Sbjct: 151 SA--VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY-TTRGGKIPIRWTAPEAIA 207
Query: 552 SEPSNEKSDVFSFGVILWELVT 573
SDV+S+G+++WE+++
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMS 229
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 373 GGIRW--EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEID 427
G +W ED ++G +G G + VY S +A+KV F ++ + G ++E++
Sbjct: 4 GSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I LRHPN+L G R+ ++ E+ P G++++ L K D +R ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELAN 122
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
++Y H + ++HRD+K NLL+ +K+ DFG S ++ A GT ++ P
Sbjct: 123 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--GTLDYLPP 178
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
E++ +EK D++S GV+ +E + P+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED +G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSRFDEQRTATYITELANALSYCHS 130
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ N +K+ DFG S ++ T GT ++ PE++
Sbjct: 131 KR--VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 186
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE++ GSL L K+
Sbjct: 73 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 132
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 133 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 190
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 191 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 249
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 250 AV---DEGYRLPPPMD 262
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 124/246 (50%), Gaps = 25/246 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRG----IWNG---SDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
E + L E+G GS+ +VY G I G + VAVK S + ++ + E ++K
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMK 75
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---------IKRRLRM 481
+V+ +G V+ + +V E + G L L + ++ ++M
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGT 541
A ++A GM YL+ + VHR+L + N +V ++TVK+GDFG++ T K G+G
Sbjct: 136 AAEIADGMAYLNAKK--FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 542 --PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV---GFMDR 595
+WMAPE L+ SD++SFGV+LWE+ + A P+ L+ QV+ V G++D+
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 596 RLELPE 601
PE
Sbjct: 254 PDNCPE 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 126
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 127 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 182
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 384 EEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
+ IG GS+ VY+GI N + VA+K+ E E +++ Q+EI ++ + P + +
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
G+ +L I+ E+L GS L + I LR ++ +G++YLH +
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR---EILKGLDYLHSERK--I 138
Query: 501 HRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
HRD+K++N+L+ + VK+ DFG++ T + GTP WMAPEV++ + K+D
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKAD 198
Query: 561 VFSFGVILWELVTASIPWNNLNLMQVVGVV 590
++S G+ EL P ++L+ M+V+ ++
Sbjct: 199 IWSLGITAIELAKGEPPNSDLHPMRVLFLI 228
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 116/214 (54%), Gaps = 15/214 (7%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEID---IIKKL 432
+D Q+ +G GS+ V+ R NG A+KV + I LK + D ++ +
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL--KKEIVVRLKQVEHTNDERLMLSIV 63
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
HP ++ G +++ ++ +++ G LF L K+ + + + A +V + YL
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAA-EVCLALEYL 122
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLR 551
H ++ I++RDLK N+L+DKN +K+ DFG + + + TY GTP ++APEV+
Sbjct: 123 HSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC----GTPDYIAPEVVS 176
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQ 585
++P N+ D +SFG++++E++ P+ + N M+
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK 210
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 380 LQLGEEIGLGSYAVVYRG---IWNGSDVAVKV-YFGSEYIEGTLKNYQKEIDIIKKLRHP 435
+++ + IG+G + V G + ++ V + + Y + +++ E I+ + HP
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
N++ G V + + I+TE++ GSL L KN + + + M + GM YL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KNATYLTAKSGRGTPQWMAPEVLR 551
+ VHRDL + N+LV+ N KV DFG+S + A Y T + G+ +W APE +
Sbjct: 130 S--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY-TTRGGKIPIRWTAPEAIA 186
Query: 552 SEPSNEKSDVFSFGVILWELVT 573
SDV+S+G+++WE+++
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMS 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 131
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 132 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 187
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 104/204 (50%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 131
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE +
Sbjct: 132 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEXIEGRX 187
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 129
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 130 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 185
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 380 LQLGEEIGLGSYAVVYRG---IWNGSDVAVKV-YFGSEYIEGTLKNYQKEIDIIKKLRHP 435
+++ + IG+G + V G + ++ V + + Y + +++ E I+ + HP
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
N++ G V + + I+TE++ GSL L KN + + + M + GM YL
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KNATYLTAKSGRGTPQWMAPEVLR 551
+ VHRDL + N+LV+ N KV DFG+S + A Y T + G+ +W APE +
Sbjct: 136 S--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY-TTRGGKIPIRWTAPEAIA 192
Query: 552 SEPSNEKSDVFSFGVILWELVT 573
SDV+S+G+++WE+++
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMS 214
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 10/240 (4%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIEGTLK-NYQKEID 427
D I+ E ++LG IG G + V++GI+ + +AV + +++ + +E
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ HP+++ +G V ++ + I+ E G L L +LD+ + A ++
Sbjct: 64 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMA 546
+ YL + VHRD+ + N+LV N VK+GDFGLS ++++T A G+ +WMA
Sbjct: 123 ALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMA 180
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PE + SDV+ FGV +WE++ + P+ + V+G + RL +P P
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPP 239
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 126
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 127 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC--GTLDYLPPEMIEGRM 182
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
Query: 380 LQLGEEIGLGSYAVVYRG---IWNGSDVAVKV-YFGSEYIEGTLKNYQKEIDIIKKLRHP 435
+++ IG G + V G + DVAV + Y E +++ E I+ + HP
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHP 104
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ G V + + IV EF+ G+L L K+ + + + M +A GM YL
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM 164
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KNATYLTAKSGRGTPQWMAPEVLR 551
VHRDL + N+LV+ N KV DFGLS + A Y T G+ +W APE ++
Sbjct: 165 G--YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVY-TTTGGKIPVRWTAPEAIQ 221
Query: 552 SEPSNEKSDVFSFGVILWELVT 573
SDV+S+G+++WE+++
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMS 243
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE++ GSL L K+
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 144
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGL+ +
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPE 202
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 203 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 262 AV---DEGYRLPPPMD 274
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 126
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ A GT ++ PE++
Sbjct: 127 KK--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--GTLDYLPPEMIEGRM 182
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 130
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 131 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 186
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 84 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 140
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 107 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 163
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 164 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 223
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 224 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 128
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR-----GTPQWMAPEV 549
+ ++HRD+K NLL+ +K+ DFG S + A S R GT ++ PE+
Sbjct: 129 KR--VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPPEM 179
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPW 578
+ +EK D++S GV+ +E + P+
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 131
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 132 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC--GTLDYLPPEMIEGRM 187
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 85 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 141
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED +G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSRFDEQRTATYITELANALSYCHS 130
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR-----GTPQWMAPEV 549
+ ++HRD+K NLL+ N +K+ DFG S + A S R GT ++ PE+
Sbjct: 131 KR--VIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPPEM 181
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPW 578
+ +EK D++S GV+ +E + P+
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 85 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 141
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 125
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 126 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 181
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 89 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 145
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 205
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 206 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 88 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 144
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 145 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 204
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 205 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 238
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 82 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 138
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 114/210 (54%), Gaps = 9/210 (4%)
Query: 384 EEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E IG GS+ V++GI N + VA+K+ E E +++ Q+EI ++ + V +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKI-IDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
G+ +L I+ E+L GS L + I L+ ++ +G++YLH +
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHSEKK--I 142
Query: 501 HRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
HRD+K++N+L+ + VK+ DFG++ T + + GTP WMAPEV++ + K+D
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKAD 202
Query: 561 VFSFGVILWELVTASIPWNNLNLMQVVGVV 590
++S G+ EL P ++++ M+V+ ++
Sbjct: 203 IWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 85 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 141
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 373 GGIRW--EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEID 427
G +W ED ++G +G G + VY S +A+KV F ++ + G ++E++
Sbjct: 4 GSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I LRHPN+L G R+ ++ E+ P G++++ L K D +R ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELAN 122
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR-----GTP 542
++Y H + ++HRD+K NLL+ +K+ DFG S + A S R GT
Sbjct: 123 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTL 173
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
++ PE++ +EK D++S GV+ +E + P+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
RWE L LG+ +G G++ V G D VAVK+ S+ E L +
Sbjct: 7 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDL 65
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--------------- 466
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 66 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 125
Query: 467 HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
H + L K + A VARGM YL + +HRDL + N+LV ++ +K+ DFGL+
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ Y +GR +WMAPE L +SDV+SFGV+LWE+ T
Sbjct: 184 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 126
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 127 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC--GTLDYLPPEMIEGRM 182
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE + GSL L K+
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF 144
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGA--VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 203 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 262 AV---DEGYRLPPPMD 274
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 92 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 148
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 149 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 208
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 209 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 242
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE++ GSL L K+
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF 144
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGL +
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 203 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 262 AV---DEGYRLPPPMD 274
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 109/212 (51%), Gaps = 19/212 (8%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVAVK--VYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLF 440
EIG GS+ VY R + N VA+K Y G + E ++ KE+ ++KLRHPN + +
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQDIIKEVRFLQKLRHPNTIQY 119
Query: 441 MGAVASQERLGIVTEF-LPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLHHRNPP 498
G + +V E+ L S +HK Q ++I AL +G+ YLH N
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL---QGLAYLHSHN-- 174
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNE- 557
++HRD+K+ N+L+ + VK+GDFG +S+ A GTP WMAPEV+ + +
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMA----PANXFVGTPYWMAPEVILAMDEGQY 230
Query: 558 --KSDVFSFGVILWELVTASIPWNNLNLMQVV 587
K DV+S G+ EL P N+N M +
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLFNMNAMSAL 262
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 127
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 128 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC--GTLDYLPPEMIEGRM 183
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 126
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ A GT ++ PE++
Sbjct: 127 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC--GTLDYLPPEMIEGRM 182
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 373 GGIRW--EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEID 427
G +W ED ++G +G G + VY S +A+KV F ++ + G ++E++
Sbjct: 1 GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I LRHPN+L G R+ ++ E+ P G++++ L K D +R ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELAN 119
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
++Y H + ++HRD+K NLL+ +K+ DFG S ++ T GT ++ P
Sbjct: 120 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC--GTLDYLPP 175
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
E++ +EK D++S GV+ +E + P+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 129
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 130 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 185
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 127
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR-----GTPQWMAPEV 549
+ ++HRD+K NLL+ +K+ DFG S + A S R GT ++ PE+
Sbjct: 128 KR--VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPPEM 178
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPW 578
+ +EK D++S GV+ +E + P+
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 126
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 127 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC--GTLDYLPPEMIEGRM 182
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
RWE L LG+ +G G++ V G D VAVK+ S+ E L +
Sbjct: 11 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDL 69
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--------------- 466
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 70 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 129
Query: 467 HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
H + L K + A VARGM YL + +HRDL + N+LV ++ +K+ DFGL+
Sbjct: 130 HNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ Y +GR +WMAPE L +SDV+SFGV+LWE+ T
Sbjct: 188 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 404 VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLF 463
VA+K + Y E +++ E I+ + HPN++ G V IVTE++ GSL
Sbjct: 80 VAIKA-LKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 464 KTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFG 523
L + I + + M V GM YL VHRDL + N+LVD N KV DFG
Sbjct: 139 TFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 524 LSSLKN---ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWE-LVTASIPWN 579
LS + T G+ +W APE + + SDV+SFGV++WE L P+
Sbjct: 197 LSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256
Query: 580 NLNLMQVVGVV--GFMDRRLELPEG 602
N+ V+ V G+ RL P G
Sbjct: 257 NMTNRDVISSVEEGY---RLPAPMG 278
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE + GSL L K+
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF 144
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 202
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 203 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 262 AV---DEGYRLPPPMD 274
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
RWE L LG+ +G G++ V G D VAVK+ S+ E L +
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDL 80
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--------------- 466
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPS 140
Query: 467 HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
H + L K + A VARGM YL + +HRDL + N+LV ++ +K+ DFGL+
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ Y +GR +WMAPE L +SDV+SFGV+LWE+ T
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
RWE L LG+ +G G++ V G D VAVK+ S+ E L +
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDL 80
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--------------- 466
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 140
Query: 467 HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
H + L K + A VARGM YL + +HRDL + N+LV ++ +K+ DFGL+
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ Y +GR +WMAPE L +SDV+SFGV+LWE+ T
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
RWE L LG+ +G G++ V G D VAVK+ S+ E L +
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDL 80
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--------------- 466
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 140
Query: 467 HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
H + L K + A VARGM YL + +HRDL + N+LV ++ +K+ DFGL+
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ Y +GR +WMAPE L +SDV+SFGV+LWE+ T
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 82 LLG-ICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 138
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
RWE L LG+ +G G++ V G D VAVK+ S+ E L +
Sbjct: 15 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDL 73
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--------------- 466
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 74 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 133
Query: 467 HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
H + L K + A VARGM YL + +HRDL + N+LV ++ +K+ DFGL+
Sbjct: 134 HNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ Y +GR +WMAPE L +SDV+SFGV+LWE+ T
Sbjct: 192 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
RWE L LG+ +G G++ V G D VAVK+ S+ E L +
Sbjct: 63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDL 121
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--------------- 466
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181
Query: 467 HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
H + L K + A VARGM YL + +HRDL + N+LV ++ +K+ DFGL+
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ Y +GR +WMAPE L +SDV+SFGV+LWE+ T
Sbjct: 240 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
RWE L LG+ +G G++ V G D VAVK+ S+ E L +
Sbjct: 14 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDL 72
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--------------- 466
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 73 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 132
Query: 467 HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
H + L K + A VARGM YL + +HRDL + N+LV ++ +K+ DFGL+
Sbjct: 133 HNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 190
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ Y +GR +WMAPE L +SDV+SFGV+LWE+ T
Sbjct: 191 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL 473
Y E +++ E I+ + HPN++ G V + + IVTE + GSL L K+
Sbjct: 56 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF 115
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KN 529
+ + + M +A GM YL VHRDL + N+L++ N KV DFGLS +
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 530 ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVG 588
A Y T + G+ +W +PE + SDV+S+G++LWE+++ P+ ++ V+
Sbjct: 174 AAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIK 232
Query: 589 VVGFMDRRLELPEGLD 604
V D LP +D
Sbjct: 233 AV---DEGYRLPPPMD 245
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 76 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 132
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 133 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 192
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 193 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 226
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 82 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 138
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
RWE L LG+ +G G++ V G D VAVK+ S+ E L +
Sbjct: 22 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM-LKSDATEKDLSDL 80
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSL---------------FKTL 466
E++++K + +H N++ +GA L ++ E+ +G+L F
Sbjct: 81 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPS 140
Query: 467 HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
H + L K + A VARGM YL + +HRDL + N+LV ++ +K+ DFGL+
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 527 LKNATYLTAKS--GRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ K+ GR +WMAPE L +SDV+SFGV+LWE+ T
Sbjct: 199 DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 373 GGIRW--EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEID 427
G +W ED ++G +G G + VY S +A+KV F ++ + G ++E++
Sbjct: 1 GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I LRHPN+L G R+ ++ E+ P G++++ L K D +R ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELAN 119
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR-----GTP 542
++Y H + ++HRD+K NLL+ +K+ DFG S + A S R GT
Sbjct: 120 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTL 170
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
++ PE++ +EK D++S GV+ +E + P+
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY R +A+KV F ++ + G ++E++I LRH
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 123
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ DFG S ++ T GT ++ PE++
Sbjct: 124 KR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 179
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPF 203
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 109/212 (51%), Gaps = 19/212 (8%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVAVK--VYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLF 440
EIG GS+ VY R + N VA+K Y G + E ++ KE+ ++KLRHPN + +
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQDIIKEVRFLQKLRHPNTIQY 80
Query: 441 MGAVASQERLGIVTEF-LPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLHHRNPP 498
G + +V E+ L S +HK Q ++I AL +G+ YLH N
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL---QGLAYLHSHN-- 135
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNE- 557
++HRD+K+ N+L+ + VK+GDFG +S+ A GTP WMAPEV+ + +
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMA----PANXFVGTPYWMAPEVILAMDEGQY 191
Query: 558 --KSDVFSFGVILWELVTASIPWNNLNLMQVV 587
K DV+S G+ EL P N+N M +
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSAL 223
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Query: 420 KNYQKEIDIIKKLRHPNVLLFMGAVASQER--LGIVTEFLPRGSLFKTLHKNYQALDIKR 477
+++Q+EI I+K L ++ + G R L +V E+LP G L L ++ LD R
Sbjct: 53 RDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASR 112
Query: 478 RLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLT 534
L + + +GM YL R VHRDL + N+LV+ VK+ DFGL+ L +
Sbjct: 113 LLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVV 170
Query: 535 AKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ G+ W APE L + +SDV+SFGV+L+EL T
Sbjct: 171 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAI-MELREATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 116 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 172
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 173 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 232
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 233 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 266
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 129
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR-----GTPQWMAPEV 549
+ ++HRD+K NLL+ +K+ DFG S + A S R GT ++ PE+
Sbjct: 130 KR--VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPPEM 180
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPW 578
+ +EK D++S GV+ +E + P+
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 128
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ +FG S ++ T GT ++ PE++
Sbjct: 129 KR--VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 184
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 102/196 (52%), Gaps = 21/196 (10%)
Query: 422 YQKEIDIIKKLRHPNVLLFMGAV--ASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL 479
+++EIDI++ L H +++ + G A L +V E++P GSL L ++ ++ + + L
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH--SIGLAQLL 137
Query: 480 RMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAK 536
A + GM YLH ++ +HRDL + N+L+D + VK+GDFGL+ + Y +
Sbjct: 138 LFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVRE 195
Query: 537 SGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-----ASIPWNNLNL-------M 584
G W APE L+ SDV+SFGV L+EL+T S P L L M
Sbjct: 196 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 255
Query: 585 QVVGVVGFMDRRLELP 600
V+ + ++R LP
Sbjct: 256 TVLRLTELLERGERLP 271
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A GMNYL R +
Sbjct: 79 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRR--L 135
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 136 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 195
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 196 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 229
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 38/234 (16%)
Query: 368 SCATDGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVY-FGSEYIEGTLKNYQKEI 426
+ A++ + ++L+L E IG G Y VY+G + VAVKV+ F + +N+ E
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANR------QNFINEK 56
Query: 427 DI--IKKLRHPNVLLFMGA---VASQERLG--IVTEFLPRGSLFKTLHKNYQALDIKRRL 479
+I + + H N+ F+ V + R+ +V E+ P GSL K L + D
Sbjct: 57 NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSC 114
Query: 480 RMALDVARGMNYLH-------HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATY 532
R+A V RG+ YLH H P I HRDL S N+LV + T + DFGLS
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
Query: 533 LT--------AKSGRGTPQWMAPEVLR-------SEPSNEKSDVFSFGVILWEL 571
L A S GT ++MAPEVL E + ++ D+++ G+I WE+
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 20/239 (8%)
Query: 365 NETSCATDGGIRWEDLQLGEEIGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNY 422
+E S A I +D +L E IG G+ AVV VA+K E + ++
Sbjct: 2 SEDSSALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIK-RINLEKCQTSMDEL 60
Query: 423 QKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--------HKNYQALD 474
KEI + + HPN++ + + ++ L +V + L GS+ + HK+ LD
Sbjct: 61 LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKS-GVLD 119
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
+ +V G+ YLH +HRD+K+ N+L+ ++ +V++ DFG+S+ L +
Sbjct: 120 ESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177
Query: 534 TAKSGR----GTPQWMAPEVLRSEPSNE-KSDVFSFGVILWELVTASIPWNNLNLMQVV 587
T R GTP WMAPEV+ + K+D++SFG+ EL T + P++ M+V+
Sbjct: 178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL 236
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++G +G G + VY S +A+KV F ++ + G ++E++I LRH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
PN+L G R+ ++ E+ P G++++ L K D +R ++A ++Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHS 129
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ ++HRD+K NLL+ +K+ +FG S ++ T GT ++ PE++
Sbjct: 130 KR--VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC--GTLDYLPPEMIEGRM 185
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+EK D++S GV+ +E + P+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 13/211 (6%)
Query: 389 GSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLLFMG 442
G++ VY+G+W G V + V E E T KEI ++ + +P+V +G
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCRLLG 84
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ + ++T+ +P G L + ++ + + L + +A+GMNYL R +VHR
Sbjct: 85 -ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHR 141
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
DL + N+LV VK+ DFGL+ L A A+ G+ +WMA E + +SD
Sbjct: 142 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 201
Query: 561 VFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
V+S+GV +WEL+T S P++ + ++ ++
Sbjct: 202 VWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 13/211 (6%)
Query: 389 GSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLLFMG 442
G++ VY+G+W G V + V E E T KEI ++ + +P+V +G
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCRLLG 91
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ + ++T+ +P G L + ++ + + L + +A+GMNYL R +VHR
Sbjct: 92 -ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHR 148
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
DL + N+LV VK+ DFGL+ L A A+ G+ +WMA E + +SD
Sbjct: 149 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 208
Query: 561 VFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
V+S+GV +WEL+T S P++ + ++ ++
Sbjct: 209 VWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++ + +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 86 LLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 142
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 202
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 203 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 25/253 (9%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRG-----IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDII 429
I+ D+ L E+G G++ V+ + + V V E E +++Q+E +++
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQ--------------ALDI 475
L+H +++ F G L +V E++ G L + L + L +
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 476 KRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTA 535
+ L +A VA GM YL + VHRDL + N LV + VK+GDFG+S +T
Sbjct: 158 GQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 215
Query: 536 KSGRGT--PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGF 592
GR +WM PE + +SDV+SFGV+LWE+ T PW L+ + + +
Sbjct: 216 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT- 274
Query: 593 MDRRLELPEGLDP 605
R LE P P
Sbjct: 275 QGRELERPRACPP 287
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 20/223 (8%)
Query: 371 TDGGIRWEDL-QLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEG---TLKNYQK 424
D + +ED+ +L E IG G+++VV R I G AVK+ +++ + ++ ++
Sbjct: 16 ADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 75
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN------YQALDIKRR 478
E I L+HP+++ + +S L +V EF+ L + K Y
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 479 LRMALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSLKNATYLTA 535
+R L+ R Y H N I+HRD+K N+L+ + + VK+GDFG++ + L A
Sbjct: 136 MRQILEALR---YCHDNN--IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVA 190
Query: 536 KSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP +MAPEV++ EP + DV+ GVIL+ L++ +P+
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++ + +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 84 LLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 140
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++ + +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 85 LLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 141
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 142 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 201
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 202 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++ + +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 83 LLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 139
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 199
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 200 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++ + +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 82 LLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 138
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 21/196 (10%)
Query: 422 YQKEIDIIKKLRHPNVLLFMGAVASQ--ERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL 479
+++EIDI++ L H +++ + G Q + L +V E++P GSL L ++ ++ + + L
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH--SIGLAQLL 120
Query: 480 RMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAK 536
A + GM YLH ++ +HR+L + N+L+D + VK+GDFGL+ + Y +
Sbjct: 121 LFAQQICEGMAYLHSQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 178
Query: 537 SGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-----ASIPWNNLNL-------M 584
G W APE L+ SDV+SFGV L+EL+T S P L L M
Sbjct: 179 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 238
Query: 585 QVVGVVGFMDRRLELP 600
V+ + ++R LP
Sbjct: 239 TVLRLTELLERGERLP 254
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++ + +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 83 LLG-ICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 139
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFGL+ L A A+ G+ +WMA E +
Sbjct: 140 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 199
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 200 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 84 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 140
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFG + L A A+ G+ +WMA E +
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 82 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 138
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFG + L A A+ G+ +WMA E +
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 198
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 199 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 21/196 (10%)
Query: 422 YQKEIDIIKKLRHPNVLLFMGAVASQ--ERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL 479
+++EIDI++ L H +++ + G Q + L +V E++P GSL L ++ ++ + + L
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH--SIGLAQLL 120
Query: 480 RMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAK 536
A + GM YLH ++ +HR+L + N+L+D + VK+GDFGL+ + Y +
Sbjct: 121 LFAQQICEGMAYLHAQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 178
Query: 537 SGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-----ASIPWNNLNL-------M 584
G W APE L+ SDV+SFGV L+EL+T S P L L M
Sbjct: 179 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 238
Query: 585 QVVGVVGFMDRRLELP 600
V+ + ++R LP
Sbjct: 239 TVLRLTELLERGERLP 254
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++T+ +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 89 LLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 145
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFG + L A A+ G+ +WMA E +
Sbjct: 146 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 205
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 206 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 25/253 (9%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRG-----IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDII 429
I+ D+ L E+G G++ V+ + + V V E E +++Q+E +++
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQ--------------ALDI 475
L+H +++ F G L +V E++ G L + L + L +
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 476 KRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTA 535
+ L +A VA GM YL + VHRDL + N LV + VK+GDFG+S +T
Sbjct: 135 GQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 192
Query: 536 KSGRGT--PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGF 592
GR +WM PE + +SDV+SFGV+LWE+ T PW L+ + + +
Sbjct: 193 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT- 251
Query: 593 MDRRLELPEGLDP 605
R LE P P
Sbjct: 252 QGRELERPRACPP 264
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 25/253 (9%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRG-----IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDII 429
I+ D+ L E+G G++ V+ + + V V E E +++Q+E +++
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQ--------------ALDI 475
L+H +++ F G L +V E++ G L + L + L +
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 476 KRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTA 535
+ L +A VA GM YL + VHRDL + N LV + VK+GDFG+S +T
Sbjct: 129 GQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 186
Query: 536 KSGRGT--PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVVGF 592
GR +WM PE + +SDV+SFGV+LWE+ T PW L+ + + +
Sbjct: 187 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT- 245
Query: 593 MDRRLELPEGLDP 605
R LE P P
Sbjct: 246 QGRELERPRACPP 258
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G++ V G D VAVK+ + E L +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 87
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 88 VSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N Y +GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 118/217 (54%), Gaps = 16/217 (7%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRG--IWNGSDVAVKVY----FGSEYIEGTLKNYQKE 425
DG ++ LG+ +G+G++ V G G VAVK+ S + G +K +E
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK---RE 61
Query: 426 IDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDV 485
I +K RHP+++ +++ +V E++ G LF + K+ + +++ R R+ +
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQI 120
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQW 544
++Y H +VHRDLK N+L+D + K+ DFGLS+ + + +L ++ G+P +
Sbjct: 121 LSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL--RTSCGSPNY 176
Query: 545 MAPEVLRSEP-SNEKSDVFSFGVILWELVTASIPWNN 580
APEV+ + + D++S GVIL+ L+ ++P+++
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 15/224 (6%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + G + AVKV + + T K + +E+ ++K+L HPN++
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 443 AVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
+ +V E G LF + K + +D R +R L G+ Y+H IV
Sbjct: 117 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKNK--IV 171
Query: 501 HRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNE 557
HRDLK NLL++ K+ +++ DFGLS+ A+ K GT ++APEVL +E
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKIGTAYYIAPEVLHG-TYDE 229
Query: 558 KSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPE 601
K DV+S GVIL+ L++ P+N N ++ V ELP+
Sbjct: 230 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 273
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 15/224 (6%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + G + AVKV + + T K + +E+ ++K+L HPN++
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 443 AVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
+ +V E G LF + K + +D R +R L G+ Y+H IV
Sbjct: 118 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKNK--IV 172
Query: 501 HRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNE 557
HRDLK NLL++ K+ +++ DFGLS+ A+ K GT ++APEVL +E
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKIGTAYYIAPEVLHG-TYDE 230
Query: 558 KSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPE 601
K DV+S GVIL+ L++ P+N N ++ V ELP+
Sbjct: 231 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 274
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 15/230 (6%)
Query: 385 EIGLGSYAVVYRGIWNGS----DVAVKVYF-GSEYIEGTLKNYQKEIDIIKKLRHPNVLL 439
E+G G++ V +G++ DVA+KV G+E + + +E I+ +L +P ++
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQLDNPYIVR 400
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G V E L +V E G L K L + + + + V+ GM YL +N
Sbjct: 401 LIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN--F 457
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKS-GRGTPQWMAPEVLRSEPSN 556
VHR+L + N+L+ K+ DFGLS A +Y TA+S G+ +W APE + +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 557 EKSDVFSFGVILWE-LVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
+SDV+S+GV +WE L P+ + +V+ + +R+E P P
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPECPP 566
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 127/233 (54%), Gaps = 14/233 (6%)
Query: 380 LQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLK-----NYQKEIDIIKKL 432
+L + +G GS+ V+ + I +GSD A ++Y + TLK + E DI+ ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKI-SGSD-ARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
HP ++ A ++ +L ++ +FL G LF L K + + +A ++A +++L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHL 142
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
H I++RDLK N+L+D+ +K+ DFGLS A S GT ++MAPEV+
Sbjct: 143 HSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
+ +D +SFGV+++E++T ++P+ + + + ++ + +L +P+ L P
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI--LKAKLGMPQFLSP 251
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 389 GSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLLFMG 442
G++ VY+G+W G V + V E E T KEI ++ + +P+V +G
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCRLLG 91
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ + ++ + +P G L + ++ + + L + +A+GMNYL R +VHR
Sbjct: 92 -ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHR 148
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
DL + N+LV VK+ DFGL+ L A A+ G+ +WMA E + +SD
Sbjct: 149 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 208
Query: 561 VFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
V+S+GV +WEL+T S P++ + ++ ++
Sbjct: 209 VWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 121/214 (56%), Gaps = 20/214 (9%)
Query: 386 IGLGSYAVVYRGIW-NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAV 444
IG G + VY+G+ +G+ VA+K E +G + + EI+ + RHP+++ +G
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRR-TPESSQGIEEF-ETEIETLSFCRHPHLVSLIGFC 104
Query: 445 ASQERLGIVTEFLPRGSLFKTLHKN---YQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ + ++ +++ G+L + L+ + ++ ++RL + + ARG++YLH R I+H
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR--AIIH 162
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL----TAKSGRGTPQWMAPEVLRSEPSNE 557
RD+KS N+L+D+N+ K+ DFG+S K T L +GT ++ PE E
Sbjct: 163 RDVKSINILLDENFVPKITDFGIS--KKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 558 KSDVFSFGVILWELVTA------SIPWNNLNLMQ 585
KSDV+SFGV+L+E++ A S+P +NL +
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G++ V G D VAVK+ + E L +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 87
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 88 VSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N Y +GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 121/214 (56%), Gaps = 20/214 (9%)
Query: 386 IGLGSYAVVYRGIW-NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAV 444
IG G + VY+G+ +G+ VA+K E +G + + EI+ + RHP+++ +G
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRR-TPESSQGIEEF-ETEIETLSFCRHPHLVSLIGFC 104
Query: 445 ASQERLGIVTEFLPRGSLFKTLHKN---YQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ + ++ +++ G+L + L+ + ++ ++RL + + ARG++YLH R I+H
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR--AIIH 162
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL----TAKSGRGTPQWMAPEVLRSEPSNE 557
RD+KS N+L+D+N+ K+ DFG+S K T L +GT ++ PE E
Sbjct: 163 RDVKSINILLDENFVPKITDFGIS--KKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 558 KSDVFSFGVILWELVTA------SIPWNNLNLMQ 585
KSDV+SFGV+L+E++ A S+P +NL +
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 115/216 (53%), Gaps = 14/216 (6%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRG--IWNGSDVAVKVY----FGSEYIEGTLKNYQKE 425
DG ++ LG+ +G+G++ V G G VAVK+ S + G +K +E
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK---RE 61
Query: 426 IDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDV 485
I +K RHP+++ +++ +V E++ G LF + K+ + +++ R R+ +
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQI 120
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM 545
++Y H +VHRDLK N+L+D + K+ DFGLS++ + S G+P +
Sbjct: 121 LSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC-GSPNYA 177
Query: 546 APEVLRSEP-SNEKSDVFSFGVILWELVTASIPWNN 580
APEV+ + + D++S GVIL+ L+ ++P+++
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G++ V G D VAVK+ + E L +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 87
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N Y +GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 206 DINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 15/224 (6%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + G + AVKV + + T K + +E+ ++K+L HPN++
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 443 AVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
+ +V E G LF + K + +D R +R L G+ Y+H IV
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKNK--IV 148
Query: 501 HRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNE 557
HRDLK NLL++ K+ +++ DFGLS+ A+ K GT ++APEVL +E
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKIGTAYYIAPEVLHG-TYDE 206
Query: 558 KSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPE 601
K DV+S GVIL+ L++ P+N N ++ V ELP+
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 250
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 115/230 (50%), Gaps = 15/230 (6%)
Query: 385 EIGLGSYAVVYRGIWNGS----DVAVKVYF-GSEYIEGTLKNYQKEIDIIKKLRHPNVLL 439
E+G G++ V +G++ DVA+KV G+E + + +E I+ +L +P ++
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQLDNPYIVR 74
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G V E L +V E G L K L + + + + V+ GM YL +N
Sbjct: 75 LIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN--F 131
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKS-GRGTPQWMAPEVLRSEPSN 556
VHRDL + N+L+ K+ DFGLS A +Y TA+S G+ +W APE + +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 557 EKSDVFSFGVILWE-LVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
+SDV+S+GV +WE L P+ + +V+ + +R+E P P
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPECPP 240
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 20/229 (8%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
I +D +L E IG G+ AVV VA+K E + ++ KEI + +
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIK-RINLEKCQTSMDELLKEIQAMSQC 65
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--------HKNYQALDIKRRLRMALD 484
HPN++ + + ++ L +V + L GS+ + HK+ LD + +
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKS-GVLDESTIATILRE 124
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGR---- 539
V G+ YLH +HRD+K+ N+L+ ++ +V++ DFG+S+ L +T R
Sbjct: 125 VLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 540 GTPQWMAPEVLRSEPSNE-KSDVFSFGVILWELVTASIPWNNLNLMQVV 587
GTP WMAPEV+ + K+D++SFG+ EL T + P++ M+V+
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL 231
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 128/233 (54%), Gaps = 14/233 (6%)
Query: 380 LQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLK-----NYQKEIDIIKKL 432
+L + +G GS+ V+ + I +GSD A ++Y + TLK + E DI+ ++
Sbjct: 27 FELLKVLGQGSFGKVFLVKKI-SGSD-ARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
HP ++ A ++ +L ++ +FL G LF L K + + +A ++A +++L
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHL 143
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
H + I++RDLK N+L+D+ +K+ DFGLS A S GT ++MAPEV+
Sbjct: 144 H--SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
+ +D +SFGV+++E++T ++P+ + + + ++ + +L +P+ L P
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI--LKAKLGMPQFLSP 252
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 127/233 (54%), Gaps = 14/233 (6%)
Query: 380 LQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLK-----NYQKEIDIIKKL 432
+L + +G GS+ V+ + I +GSD A ++Y + TLK + E DI+ ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKI-SGSD-ARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
HP ++ A ++ +L ++ +FL G LF L K + + +A ++A +++L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHL 142
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
H I++RDLK N+L+D+ +K+ DFGLS A S GT ++MAPEV+
Sbjct: 143 HSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
+ +D +SFGV+++E++T ++P+ + + + ++ + +L +P+ L P
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI--LKAKLGMPQFLSP 251
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G++ V G D VAVK+ + E L +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEEDLSDL 87
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N Y +GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G + V G D VAVK+ + E L +
Sbjct: 75 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 133
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 134 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 193
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 194 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N Y +GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 252 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 115/222 (51%), Gaps = 21/222 (9%)
Query: 385 EIGLGSYA-VVYRGIWNG-SDVAVKVYFGSEYIEGTL----KNYQK-------EIDIIKK 431
++G G+Y V+ NG S+ A+KV S++ +G KN +K EI ++K
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L HPN++ ++ +VTEF G LF+ + N D + + G+ Y
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII-NRHKFDECDAANIMKQILSGICY 161
Query: 492 LHHRNPPIVHRDLKSSNLLVD-KN--WTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPE 548
LH N IVHRD+K N+L++ KN +K+ DFGLSS + Y + GT ++APE
Sbjct: 162 LHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY-KLRDRLGTAYYIAPE 218
Query: 549 VLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
VL+ + NEK DV+S GVI++ L+ P+ N ++ V
Sbjct: 219 VLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G + V G D VAVK+ + E L +
Sbjct: 21 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 79
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 80 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 139
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 140 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 197
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N Y +GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 198 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++ + +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 84 LLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 140
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFG + L A A+ G+ +WMA E +
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G + V G D VAVK+ + E L +
Sbjct: 16 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 74
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 75 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 134
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 135 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTENNVMKIADFGLAR 192
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N Y +GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 193 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++ + +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 84 LLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 140
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFG + L A A+ G+ +WMA E +
Sbjct: 141 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 200
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 201 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G + V G D VAVK+ + E L +
Sbjct: 18 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 76
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 77 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 136
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 137 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 194
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N Y +GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 195 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 8/209 (3%)
Query: 384 EEIGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E++G GSY VY+ I G VA+K +E L+ KEI I+++ P+V+ +
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIK----QVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
G+ L IV E+ GS+ + + L + +G+ YLH +H
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK--IH 148
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
RD+K+ N+L++ K+ DFG++ GTP WMAPEV++ N +D+
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADI 208
Query: 562 FSFGVILWELVTASIPWNNLNLMQVVGVV 590
+S G+ E+ P+ +++ M+ + ++
Sbjct: 209 WSLGITAIEMAEGKPPYADIHPMRAIFMI 237
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 15/224 (6%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + G + AVKV + + T K + +E+ ++K+L HPN++
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 443 AVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
+ +V E G LF + K + +D R +R L G+ Y+H IV
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKNK--IV 154
Query: 501 HRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNE 557
HRDLK NLL++ K+ +++ DFGLS+ A+ K GT ++APEVL +E
Sbjct: 155 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKIGTAYYIAPEVLHG-TYDE 212
Query: 558 KSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPE 601
K DV+S GVIL+ L++ P+N N ++ V ELP+
Sbjct: 213 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 256
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 13/214 (6%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEI----DIIKKLRHPNVLL 439
+G G++ VY+G+W G V + V E E T KEI ++ + +P+V
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAI-KELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + + ++ + +P G L + ++ + + L + +A+GMNYL R +
Sbjct: 86 LLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--L 142
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNE 557
VHRDL + N+LV VK+ DFG + L A A+ G+ +WMA E +
Sbjct: 143 VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 202
Query: 558 KSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
+SDV+S+GV +WEL+T S P++ + ++ ++
Sbjct: 203 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G++ V G D VAVK+ + E L +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 87
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDIN 147
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 527 LKNATYLTAKS--GRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N K+ GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 206 DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G++ V G D VAVK+ + E L +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 87
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 527 LKNATYLTAKS--GRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N K+ GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 206 DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Query: 422 YQKEIDIIKKLRHPNVLLFMGAVASQ--ERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL 479
+Q+EI+I++ L H +++ + G Q + + +V E++P GSL L ++ + + + L
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--CVGLAQLL 114
Query: 480 RMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAK 536
A + GM YLH ++ +HR L + N+L+D + VK+GDFGL+ + Y +
Sbjct: 115 LFAQQICEGMAYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 537 SGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
G W APE L+ SDV+SFGV L+EL+T
Sbjct: 173 DGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Query: 422 YQKEIDIIKKLRHPNVLLFMGAVASQ--ERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL 479
+Q+EI+I++ L H +++ + G Q + + +V E++P GSL L ++ + + + L
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--CVGLAQLL 115
Query: 480 RMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAK 536
A + GM YLH ++ +HR L + N+L+D + VK+GDFGL+ + Y +
Sbjct: 116 LFAQQICEGMAYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 173
Query: 537 SGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
G W APE L+ SDV+SFGV L+EL+T
Sbjct: 174 DGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G++ V G D VAVK+ + E L +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 87
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ E+ +G+L + L
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +++ DFGL+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMRIADFGLAR 205
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N Y +GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 19/213 (8%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE--GTLKNYQKEID---IIKKLRHPNVLLF 440
+G G + V++G+W ++K+ + IE +++Q D I L H +++
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
+G + L +VT++LP GSL + ++ AL + L + +A+GM YL +V
Sbjct: 99 LG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MV 155
Query: 501 HRDLKSSNLLVDKNWTVKVGDFGLSSL-----KNATYLTAKSGRGTP-QWMAPEVLRSEP 554
HR+L + N+L+ V+V DFG++ L K Y AK TP +WMA E +
Sbjct: 156 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK----TPIKWMALESIHFGK 211
Query: 555 SNEKSDVFSFGVILWELVT-ASIPWNNLNLMQV 586
+SDV+S+GV +WEL+T + P+ L L +V
Sbjct: 212 YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV 244
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 115/213 (53%), Gaps = 11/213 (5%)
Query: 373 GGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYI-----EGTLKNYQKEID 427
G I E ++ +++G G + VY + + + +KV + +I E TLK +++E+
Sbjct: 6 GKIINERYKIVDKLGGGGMSTVY--LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH 63
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+L H N++ + + +V E++ +L + + +++ L + + +
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILD 122
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSG-RGTPQWMA 546
G+ + H + IVHRD+K N+L+D N T+K+ DFG++ + T LT + GT Q+ +
Sbjct: 123 GIKHAH--DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFS 180
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASIPWN 579
PE + E ++E +D++S G++L+E++ P+N
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 39/234 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVV-------YRGIWNGSDVAVKVYFGSEYIEGTLKNYQK 424
+WE +L LG+ +G G + V +G + VAVK+ L++
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM-LKENASPSELRDLLS 75
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL------------------ 466
E +++K++ HP+V+ GA + L ++ E+ GSL L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 467 -----HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGD 521
H + +AL + + A +++GM YL +VHRDL + N+LV + +K+ D
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISD 193
Query: 522 FGLSS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
FGLS + +Y+ GR +WMA E L +SDV+SFGV+LWE+VT
Sbjct: 194 FGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 19/213 (8%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIE--GTLKNYQKEID---IIKKLRHPNVLLF 440
+G G + V++G+W ++K+ + IE +++Q D I L H +++
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
+G + L +VT++LP GSL + ++ AL + L + +A+GM YL +V
Sbjct: 81 LG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MV 137
Query: 501 HRDLKSSNLLVDKNWTVKVGDFGLSSL-----KNATYLTAKSGRGTP-QWMAPEVLRSEP 554
HR+L + N+L+ V+V DFG++ L K Y AK TP +WMA E +
Sbjct: 138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAK----TPIKWMALESIHFGK 193
Query: 555 SNEKSDVFSFGVILWELVT-ASIPWNNLNLMQV 586
+SDV+S+GV +WEL+T + P+ L L +V
Sbjct: 194 YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV 226
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 121/227 (53%), Gaps = 22/227 (9%)
Query: 380 LQLGEEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL-RHPN 436
+L E +G G+Y VY+G + G A+KV + E +K +EI+++KK H N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK---QEINMLKKYSHHRN 82
Query: 437 VLLFMGAVASQ------ERLGIVTEFLPRGSLFKTLHKNYQALDIKRR--LRMALDVARG 488
+ + GA + ++L +V EF GS+ L KN + +K + ++ RG
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV-TDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPE 548
+++LH ++HRD+K N+L+ +N VK+ DFG+S+ + T + GTP WMAPE
Sbjct: 142 LSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE 199
Query: 549 VLRSEPSNE-----KSDVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
V+ + + + KSD++S G+ E+ + P +++ M+ + ++
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 112/224 (50%), Gaps = 15/224 (6%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + G + AVKV + + T K + +E+ ++K+L HPN+
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 443 AVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
+ +V E G LF + K + +D R +R L G+ Y H IV
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYXHKNK--IV 148
Query: 501 HRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNE 557
HRDLK NLL++ K+ +++ DFGLS+ A+ K GT ++APEVL +E
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KXKDKIGTAYYIAPEVLHG-TYDE 206
Query: 558 KSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPE 601
K DV+S GVIL+ L++ P+N N ++ V ELP+
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 250
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G++ V G D VAVK+ + E L +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 87
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ + +G+L + L
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N Y +GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEI----DIIKKLRHPNVLLF 440
+G G++ VY+GIW VK+ + + E T KEI ++ + P V
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
+G + + +VT+ +P G L + +N L + L + +A+GM+YL +V
Sbjct: 85 LG-ICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR--LV 141
Query: 501 HRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
HRDL + N+LV VK+ DFGL+ L + T A G+ +WMA E + +
Sbjct: 142 HRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQ 201
Query: 559 SDVFSFGVILWELVT 573
SDV+S+GV +WEL+T
Sbjct: 202 SDVWSYGVTVWELMT 216
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 113/225 (50%), Gaps = 28/225 (12%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNG---SDVAVKVYFGSEYIEGTLKNYQKE--- 425
+WE +LQ G+ +G G++ V G D +KV + ++ T +KE
Sbjct: 32 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV--AVKMLKSTAHADEKEALM 89
Query: 426 --IDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQA---------L 473
+ I+ L +H N++ +GA + ++TE+ G L L + +A L
Sbjct: 90 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS--LKNAT 531
+++ L + VA+GM +L +N +HRD+ + N+L+ K+GDFGL+ + ++
Sbjct: 150 ELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
Y+ + R +WMAPE + +SDV+S+G++LWE+ + +
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 252
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 113/225 (50%), Gaps = 28/225 (12%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNG---SDVAVKVYFGSEYIEGTLKNYQKE--- 425
+WE +LQ G+ +G G++ V G D +KV + ++ T +KE
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV--AVKMLKSTAHADEKEALM 97
Query: 426 --IDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQA---------L 473
+ I+ L +H N++ +GA + ++TE+ G L L + +A L
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS--LKNAT 531
+++ L + VA+GM +L +N +HRD+ + N+L+ K+GDFGL+ + ++
Sbjct: 158 ELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
Y+ + R +WMAPE + +SDV+S+G++LWE+ + +
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 260
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
Query: 424 KEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRM 481
+E++++KKL HPN++ + IV E G LF + K + D R ++
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK- 128
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSLKNATYLTAKSG 538
V G+ Y+H N IVHRDLK N+L+ +K+ +K+ DFGLS+ K
Sbjct: 129 --QVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDR 183
Query: 539 RGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLE 598
GT ++APEVLR +EK DV+S GVIL+ L++ + P+ N ++ V +
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 599 LPE 601
LP+
Sbjct: 243 LPQ 245
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
Query: 424 KEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRM 481
+E++++KKL HPN++ + IV E G LF + K + D R ++
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK- 128
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSLKNATYLTAKSG 538
V G+ Y+H N IVHRDLK N+L+ +K+ +K+ DFGLS+ K
Sbjct: 129 --QVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDR 183
Query: 539 RGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLE 598
GT ++APEVLR +EK DV+S GVIL+ L++ + P+ N ++ V +
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 599 LPE 601
LP+
Sbjct: 243 LPQ 245
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 102/179 (56%), Gaps = 5/179 (2%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E DI+ + HP V+ A ++ +L ++ +FL G LF L K + + +A +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 138
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
+A G+++LH I++RDLK N+L+D+ +K+ DFGLS A S GT ++
Sbjct: 139 LALGLDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEY 196
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGL 603
MAPEV+ + + +D +S+GV+++E++T S+P+ + + + ++ + +L +P+ L
Sbjct: 197 MAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI--LKAKLGMPQFL 253
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD---------VAVKVYFGSEYIEGTLKNY 422
+WE L LG+ +G G++ V G D VAVK+ + E L +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM-LKDDATEKDLSDL 87
Query: 423 QKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY----------- 470
E++++K + +H N++ +GA L ++ + +G+L + L
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 471 ----QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+ + K + +ARGM YL + +HRDL + N+LV +N +K+ DFGL+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 527 LKNAT--YLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
N Y +GR +WMAPE L +SDV+SFGV++WE+ T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 383 GEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGT--LKNYQKE-----IDIIKKLRHP 435
G +G G +A Y +D+ K F + + + LK +QKE I I K L +P
Sbjct: 47 GRFLGKGGFAKCY----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
+V+ F G + + +V E R SL + LHK +A+ +G+ YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH-- 159
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS 555
N ++HRDLK NL ++ + VK+GDFGL++ K+ GTP ++APEVL +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 556 NEKSDVFSFGVILWELVTASIPWNNLNLMQ 585
+ + D++S G IL+ L+ P+ L +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
Query: 424 KEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRM 481
+E++++KKL HPN++ + IV E G LF + K + D R ++
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSLKNATYLTAKSG 538
V G+ Y+H N IVHRDLK N+L+ +K+ +K+ DFGLS+ K
Sbjct: 130 ---VFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDR 183
Query: 539 RGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLE 598
GT ++APEVLR +EK DV+S GVIL+ L++ + P+ N ++ V +
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 599 LPE 601
LP+
Sbjct: 243 LPQ 245
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 22/236 (9%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRG-IWN----GSDVAVKVYFGSEYIEGTLKNYQKEIDII 429
I+ ++ L E+G G++ V+ +N + V V + + K++ +E +++
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 430 KKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN------------YQALDIKR 477
L+H +++ F G + L +V E++ G L K L + L +
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 478 RLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTAK 536
L +A +A GM YL ++ VHRDL + N LV +N VK+GDFG+S + + Y
Sbjct: 130 MLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVG 187
Query: 537 SGRGTP-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPWNNLNLMQVVGVV 590
P +WM PE + +SDV+S GV+LWE+ T PW L+ +V+ +
Sbjct: 188 GHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 383 GEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGT--LKNYQKE-----IDIIKKLRHP 435
G +G G +A Y +D+ K F + + + LK +QKE I I K L +P
Sbjct: 31 GRFLGKGGFAKCY----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 86
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
+V+ F G + + +V E R SL + LHK +A+ +G+ YLH
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH-- 143
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS 555
N ++HRDLK NL ++ + VK+GDFGL++ K GTP ++APEVL +
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 556 NEKSDVFSFGVILWELVTASIPWNN 580
+ + D++S G IL+ L+ P+
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFET 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 383 GEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGT--LKNYQKE-----IDIIKKLRHP 435
G +G G +A Y +D+ K F + + + LK +QKE I I K L +P
Sbjct: 47 GRFLGKGGFAKCY----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
+V+ F G + + +V E R SL + LHK +A+ +G+ YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH-- 159
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS 555
N ++HRDLK NL ++ + VK+GDFGL++ K GTP ++APEVL +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 556 NEKSDVFSFGVILWELVTASIPWNNLNLMQ 585
+ + D++S G IL+ L+ P+ L +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 383 GEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGT--LKNYQKE-----IDIIKKLRHP 435
G +G G +A Y +D+ K F + + + LK +QKE I I K L +P
Sbjct: 47 GRFLGKGGFAKCY----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
+V+ F G + + +V E R SL + LHK +A+ +G+ YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH-- 159
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS 555
N ++HRDLK NL ++ + VK+GDFGL++ K GTP ++APEVL +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 556 NEKSDVFSFGVILWELVTASIPWNNLNLMQ 585
+ + D++S G IL+ L+ P+ L +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 404 VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLF 463
VA+K E +EG + + EI ++ K++HPN++ S L ++ + + G LF
Sbjct: 46 VAIKC-IAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 464 KTLHKN--YQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLL---VDKNWTVK 518
+ + Y D R + LD + YLH IVHRDLK NLL +D++ +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVK---YLHDLG--IVHRDLKPENLLYYSLDEDSKIM 159
Query: 519 VGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+ DFGLS +++ + + + GTP ++APEVL +P ++ D +S GVI + L+ P+
Sbjct: 160 ISDFGLSKMEDPGSVLS-TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 579 NNLN 582
+ N
Sbjct: 219 YDEN 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 7/182 (3%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM-AL 483
E +++ RHP + A + +RL V E+ G LF H + + + + R R
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGA 115
Query: 484 DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQ 543
++ + YLH R+ +V+RD+K NL++DK+ +K+ DFGL + T K+ GTP+
Sbjct: 116 EIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 173
Query: 544 WMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGL 603
++APEVL D + GV+++E++ +P+ N + ++ ++ + + P L
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI--LMEEIRFPRTL 231
Query: 604 DP 605
P
Sbjct: 232 SP 233
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 7/182 (3%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM-AL 483
E +++ RHP + A + +RL V E+ G LF H + + + + R R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGA 112
Query: 484 DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQ 543
++ + YLH R+ +V+RD+K NL++DK+ +K+ DFGL + T K+ GTP+
Sbjct: 113 EIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 544 WMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGL 603
++APEVL D + GV+++E++ +P+ N + ++ ++ + + P L
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI--LMEEIRFPRTL 228
Query: 604 DP 605
P
Sbjct: 229 SP 230
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM-ALDVA 486
+++ RHP + A + +RL V E+ G LF H + + + + R R ++
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIV 115
Query: 487 RGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMA 546
+ YLH R+ +V+RD+K NL++DK+ +K+ DFGL + T K+ GTP+++A
Sbjct: 116 SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PEVL D + GV+++E++ +P+ N + ++ ++ + + P L P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI--LMEEIRFPRTLSP 230
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 10/240 (4%)
Query: 370 ATDGGIRWEDLQLGEEIGLGSY--AVVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEI 426
A D + D + +G G++ ++ R G A+K+ I + + + E
Sbjct: 2 AMDPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 61
Query: 427 DIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM-ALDV 485
+++ RHP + A + +RL V E+ G LF H + + + + R R ++
Sbjct: 62 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEI 119
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM 545
+ YLH R+ +V+RD+K NL++DK+ +K+ DFGL + T K GTP+++
Sbjct: 120 VSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 177
Query: 546 APEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
APEVL D + GV+++E++ +P+ N + ++ ++ + + P L P
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI--LMEEIRFPRTLSP 235
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 20/223 (8%)
Query: 371 TDGGIRWEDL-QLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEG---TLKNYQK 424
D + +ED+ +L E IG G ++VV R I G AVK+ +++ + ++ ++
Sbjct: 18 ADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 77
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN------YQALDIKRR 478
E I L+HP+++ + +S L +V EF+ L + K Y
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 479 LRMALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSLKNATYLTA 535
+R L+ R Y H N I+HRD+K +L+ + + VK+G FG++ + L A
Sbjct: 138 MRQILEALR---YCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA 192
Query: 536 KSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP +MAPEV++ EP + DV+ GVIL+ L++ +P+
Sbjct: 193 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSD-----VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH 434
L LG+ +G G + V G D VAVK + ++ + E +K H
Sbjct: 36 LILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSH 95
Query: 435 PNVLLFMGAVASQERLGI-----VTEFLPRGSL-----FKTLHKNYQALDIKRRLRMALD 484
PNV+ +G GI + F+ G L + L + + ++ L+ +D
Sbjct: 96 PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD 155
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS--LKNATYLTAKSGRGTP 542
+A GM YL +RN +HRDL + N ++ + TV V DFGLS Y + +
Sbjct: 156 IALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV 213
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+W+A E L KSDV++FGV +WE+ T
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 20/223 (8%)
Query: 371 TDGGIRWEDL-QLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEG---TLKNYQK 424
D + +ED+ +L E IG G ++VV R I G AVK+ +++ + ++ ++
Sbjct: 16 ADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 75
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN------YQALDIKRR 478
E I L+HP+++ + +S L +V EF+ L + K Y
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 479 LRMALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSLKNATYLTA 535
+R L+ R Y H N I+HRD+K +L+ + + VK+G FG++ + L A
Sbjct: 136 MRQILEALR---YCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA 190
Query: 536 KSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP +MAPEV++ EP + DV+ GVIL+ L++ +P+
Sbjct: 191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 111/234 (47%), Gaps = 39/234 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVV-------YRGIWNGSDVAVKVYFGSEYIEGTLKNYQK 424
+WE +L LG+ +G G + V +G + VAVK+ L++
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM-LKENASPSELRDLLS 75
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL------------------ 466
E +++K++ HP+V+ GA + L ++ E+ GSL L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 467 -----HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGD 521
H + +AL + + A +++GM YL + +VHRDL + N+LV + +K+ D
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNILVAEGRKMKISD 193
Query: 522 FGLSS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
FGLS + + + GR +WMA E L +SDV+SFGV+LWE+VT
Sbjct: 194 FGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 98/184 (53%), Gaps = 12/184 (6%)
Query: 404 VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLF 463
VA+K E +EG + + EI ++ K++HPN++ S L ++ + + G LF
Sbjct: 46 VAIKC-IAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 464 KTLHKN--YQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLL---VDKNWTVK 518
+ + Y D R + LD + YLH + IVHRDLK NLL +D++ +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVK---YLH--DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 519 VGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+ DFGLS +++ + + + GTP ++APEVL +P ++ D +S GVI + L+ P+
Sbjct: 160 ISDFGLSKMEDPGSVLS-TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 579 NNLN 582
+ N
Sbjct: 219 YDEN 222
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 7/179 (3%)
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM-ALDVA 486
+++ RHP + A + +RL V E+ G LF H + + + + R R ++
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIV 115
Query: 487 RGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMA 546
+ YLH R+ +V+RD+K NL++DK+ +K+ DFGL + T K GTP+++A
Sbjct: 116 SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PEVL D + GV+++E++ +P+ N + ++ ++ + + P L P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI--LMEEIRFPRTLSP 230
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 7/179 (3%)
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM-ALDVA 486
+++ RHP + A + +RL V E+ G LF H + + + + R R ++
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIV 115
Query: 487 RGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMA 546
+ YLH R+ +V+RD+K NL++DK+ +K+ DFGL + T K GTP+++A
Sbjct: 116 SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PEVL D + GV+++E++ +P+ N + ++ ++ + + P L P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI--LMEEIRFPRTLSP 230
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG--SDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
+D QL EE+G G+++VV R + + A K+ + + ++E I + L+HP
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLH 493
N++ +++ + +V + + G LF+ + + Y D + L+ +N++H
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILE---SVNHIH 147
Query: 494 HRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVL 550
+ IVHRDLK NLL+ K VK+ DFGL+ GTP +++PEVL
Sbjct: 148 QHD--IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVL 205
Query: 551 RSEPSNEKSDVFSFGVILWELVTASIPW 578
R +P + D+++ GVIL+ L+ P+
Sbjct: 206 RKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVV-------YRGIWNGSDVAVKVYFGSEYIEGTLKNYQK 424
+WE +L LG+ +G G + V +G + VAVK+ L++
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM-LKENASPSELRDLLS 75
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL------------------ 466
E +++K++ HP+V+ GA + L ++ E+ GSL L
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 467 -----HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGD 521
H + +AL + + A +++GM YL +VHRDL + N+LV + +K+ D
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISD 193
Query: 522 FGLSS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
FGLS + + + GR +WMA E L +SDV+SFGV+LWE+VT
Sbjct: 194 FGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 98/184 (53%), Gaps = 12/184 (6%)
Query: 404 VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLF 463
VA+K E +EG + + EI ++ K++HPN++ S L ++ + + G LF
Sbjct: 46 VAIKC-IAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 464 KTLHKN--YQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLL---VDKNWTVK 518
+ + Y D R + LD + YLH + IVHRDLK NLL +D++ +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVK---YLH--DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 519 VGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+ DFGLS +++ + + + GTP ++APEVL +P ++ D +S GVI + L+ P+
Sbjct: 160 ISDFGLSKMEDPGSVLS-TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 579 NNLN 582
+ N
Sbjct: 219 YDEN 222
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 7/179 (3%)
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM-ALDVA 486
+++ RHP + A + +RL V E+ G LF H + + + + R R ++
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF--FHLSRERVFTEERARFYGAEIV 115
Query: 487 RGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMA 546
+ YLH R+ +V+RD+K NL++DK+ +K+ DFGL + T K GTP+++A
Sbjct: 116 SALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 547 PEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
PEVL D + GV+++E++ +P+ N + ++ ++ + + P L P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI--LMEEIRFPRTLSP 230
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 36/245 (14%)
Query: 379 DLQLGEEIGLGSYAVVYRGIWNG-------SDVAVKVYFGSEYIEGTLKNYQKEIDIIKK 431
+++ +IG G++ V++ G + VAVK+ E ++Q+E ++ +
Sbjct: 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKM-LKEEASADMQADFQREAALMAE 106
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL------------HKNYQA------- 472
+PN++ +G A + + ++ E++ G L + L H +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 473 ----LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SL 527
L +L +A VA GM YL R VHRDL + N LV +N VK+ DFGLS ++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 528 KNATYLTAKSGRGTP-QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQ 585
+A Y A P +WM PE + +SDV+++GV+LWE+ + + P+ + +
Sbjct: 225 YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 284
Query: 586 VVGVV 590
V+ V
Sbjct: 285 VIYYV 289
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 97/184 (52%), Gaps = 12/184 (6%)
Query: 404 VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLF 463
VA+K + +EG + + EI ++ K++HPN++ S L ++ + + G LF
Sbjct: 46 VAIKC-IAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 464 KTLHKN--YQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLL---VDKNWTVK 518
+ + Y D R + LD + YLH IVHRDLK NLL +D++ +
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDAVK---YLHDLG--IVHRDLKPENLLYYSLDEDSKIM 159
Query: 519 VGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+ DFGLS +++ + + + GTP ++APEVL +P ++ D +S GVI + L+ P+
Sbjct: 160 ISDFGLSKMEDPGSVLS-TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 579 NNLN 582
+ N
Sbjct: 219 YDEN 222
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 13/212 (6%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSD--VAVK-----VYFGSEYIEGTLKNYQKEID 427
++ ED +L + +G GS+ V+ + ++ A+K V + +E T+ +K +
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM--VEKRV- 71
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+ HP + ++E L V E+L G L + ++ D+ R A ++
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIIL 130
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
G+ +LH + IV+RDLK N+L+DK+ +K+ DFG+ GTP ++AP
Sbjct: 131 GLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAP 188
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPWN 579
E+L + N D +SFGV+L+E++ P++
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKE-----IDIIKKLRHPNVL 438
+G G +A + SD K F + + +L K +Q+E I I + L H +V+
Sbjct: 29 LGKGGFA----KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 84
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F G + + +V E R SL + LHK +AL + G YLH
Sbjct: 85 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 141
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
++HRDLK NL ++++ VK+GDFGL++ K+ GTP ++APEVL + + +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 559 SDVFSFGVILWELVTASIPWNN 580
DV+S G I++ L+ P+
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFET 223
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKE-----IDIIKKLRHPNVL 438
+G G +A + SD K F + + +L K +Q+E I I + L H +V+
Sbjct: 25 LGKGGFA----KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 80
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F G + + +V E R SL + LHK +AL + G YLH
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
++HRDLK NL ++++ VK+GDFGL++ K+ GTP ++APEVL + + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 559 SDVFSFGVILWELVTASIPWNN 580
DV+S G I++ L+ P+
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFET 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKE-----IDIIKKLRHPNVL 438
+G G +A + SD K F + + +L K +Q+E I I + L H +V+
Sbjct: 25 LGKGGFA----KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 80
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F G + + +V E R SL + LHK +AL + G YLH
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
++HRDLK NL ++++ VK+GDFGL++ K+ GTP ++APEVL + + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 559 SDVFSFGVILWELVTASIPWNN 580
DV+S G I++ L+ P+
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFET 219
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
++ QL EE+G G+++VV R I G + A K+ + + ++E I + L+HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLH 493
N++ +++ + +V + + G LF+ + + Y D ++ L+ +N+ H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE---SVNHCH 120
Query: 494 HRNPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVL 550
IVHRDLK NLL+ K VK+ DFGL+ GTP +++PEVL
Sbjct: 121 LNG--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 551 RSEPSNEKSDVFSFGVILWELVTASIPW 578
R +P + D+++ GVIL+ L+ P+
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 121/250 (48%), Gaps = 37/250 (14%)
Query: 367 TSCATDGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD---VAVKVYFGSEYIE------- 416
+S ++ ++ L +EIG GSY VV + +N +D A+KV + I
Sbjct: 2 SSGSSGDCVQLNQYTLKDEIGKGSYGVV-KLAYNENDNTYYAMKVLSKKKLIRQAGFPRR 60
Query: 417 -----------------GTLKNYQKEIDIIKKLRHPNVLLFMGAV--ASQERLGIVTEFL 457
G ++ +EI I+KKL HPNV+ + + +++ L +V E +
Sbjct: 61 PPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELV 120
Query: 458 PRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTV 517
+G + + + L + D+ +G+ YLH++ I+HRD+K SNLLV ++ +
Sbjct: 121 NQGPVMEV--PTLKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHI 176
Query: 518 KVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVL---RSEPSNEKSDVFSFGVILWELVTA 574
K+ DFG+S+ + + GTP +MAPE L R S + DV++ GV L+ V
Sbjct: 177 KIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236
Query: 575 SIPWNNLNLM 584
P+ + +M
Sbjct: 237 QCPFMDERIM 246
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
++ QL EE+G G+++VV R I G + A K+ + + ++E I + L+HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLH 493
N++ +++ + +V + + G LF+ + + Y D ++ L+ +N+ H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE---SVNHCH 120
Query: 494 HRNPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVL 550
IVHRDLK NLL+ K VK+ DFGL+ GTP +++PEVL
Sbjct: 121 LNG--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 551 RSEPSNEKSDVFSFGVILWELVTASIPW 578
R +P + D+++ GVIL+ L+ P+
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 384 EEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E+IG G+ VY + G +VA++ + + L EI ++++ ++PN++ ++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYL 83
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ + L +V E+L GSL + + +D + + + + + +LH ++H
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIH 139
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
RD+KS N+L+ + +VK+ DFG + + GTP WMAPEV+ + K D+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 562 FSFGVILWELVTASIPWNNLNLMQVVGVVG 591
+S G++ E++ P+ N N ++ + ++
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 381 QLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL 438
QL EE+G G+++VV R + G + A K+ + + ++E I + L+HPN++
Sbjct: 25 QLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIV 84
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLHHRN 496
+++ + ++ + + G LF+ + + Y D ++ L+ LH
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-----LHCHQ 139
Query: 497 PPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSE 553
+VHRDLK NLL+ K VK+ DFGL+ GTP +++PEVLR +
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 554 PSNEKSDVFSFGVILWELVTASIPW 578
P + D+++ GVIL+ L+ P+
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 384 EEIGLGSYAVVYRGI--WNGSDVAVK-VYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLF 440
E++G G+YA VY+G+ G VA+K V SE EGT +EI ++K+L+H N++
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKELKHENIVRL 68
Query: 441 MGAVASQERLGIVTEF----LPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
+ ++ +L +V EF L + +T+ + L++ + +G+ + H
Sbjct: 69 YDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128
Query: 497 PPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSN 556
I+HRDLK NLL++K +K+GDFGL+ T S T + AP+VL +
Sbjct: 129 --ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 557 EKS-DVFSFGVILWELVTA 574
S D++S G IL E++T
Sbjct: 187 STSIDIWSCGCILAEMITG 205
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 32/226 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNG---SDVAVKVYFGSEYIEGTLKNYQKE--- 425
+WE +LQ G+ +G G++ V G D +KV + ++ T +KE
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV--AVKMLKSTAHADEKEALM 97
Query: 426 --IDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDI------- 475
+ I+ L +H N++ +GA + ++TE+ G L L + + L+
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 476 ------KRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS--L 527
+ L + VA+GM +L +N +HRD+ + N+L+ K+GDFGL+ +
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 528 KNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
++ Y+ + R +WMAPE + +SDV+S+G++LWE+ +
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKE-----IDIIKKLRHPNVL 438
+G G +A + SD K F + + +L K +Q+E I I + L H +V+
Sbjct: 49 LGKGGFA----KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 104
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F G + + +V E R SL + LHK +AL + G YLH
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 161
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
++HRDLK NL ++++ VK+GDFGL++ K GTP ++APEVL + + +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 559 SDVFSFGVILWELVTASIPWNN 580
DV+S G I++ L+ P+
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFET 243
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 32/226 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNG---SDVAVKVYFGSEYIEGTLKNYQKE--- 425
+WE +LQ G+ +G G++ V G D +KV + ++ T +KE
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV--AVKMLKSTAHADEKEALM 97
Query: 426 --IDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDI------- 475
+ I+ L +H N++ +GA + ++TE+ G L L + + L+
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 476 ------KRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS--L 527
+ L + VA+GM +L +N +HRD+ + N+L+ K+GDFGL+ +
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 528 KNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
++ Y+ + R +WMAPE + +SDV+S+G++LWE+ +
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 39/237 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGS-------DVAVKVYFGSEYIEGTLKNYQK 424
+WE +LQ G+ +G G++ V G VAVK+ + + + +
Sbjct: 25 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK-EALMS 83
Query: 425 EIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQA----------- 472
E+ I+ L +H N++ +GA + ++TE+ G L L + +A
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 473 -----------LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGD 521
L+++ L + VA+GM +L +N +HRD+ + N+L+ K+GD
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGD 201
Query: 522 FGLSS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
FGL+ + ++ Y+ + R +WMAPE + +SDV+S+G++LWE+ + +
Sbjct: 202 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 258
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 28/216 (12%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL-------KNYQK---EID 427
E+ QL EE+G G+++VV R VKV G EY + +++QK E
Sbjct: 11 EEYQLFEELGKGAFSVVRR--------CVKVLAGQEYAAMIINTKKLSARDHQKLEREAR 62
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDV 485
I + L+HPN++ +++ + ++ + + G LF+ + + Y D ++ L+
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 122
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTP 542
LH +VHR+LK NLL+ K VK+ DFGL+ GTP
Sbjct: 123 V-----LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 177
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+++PEVLR +P + D+++ GVIL+ L+ P+
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 8/210 (3%)
Query: 384 EEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E+IG G+ VY + G +VA++ + + L EI ++++ ++PN++ ++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYL 83
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ + L +V E+L GSL + + +D + + + + + +LH ++H
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIH 139
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
RD+KS N+L+ + +VK+ DFG + GTP WMAPEV+ + K D+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 562 FSFGVILWELVTASIPWNNLNLMQVVGVVG 591
+S G++ E++ P+ N N ++ + ++
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKE-----IDIIKKLRHPNVL 438
+G G +A + SD K F + + +L K +Q+E I I + L H +V+
Sbjct: 47 LGKGGFA----KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 102
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F G + + +V E R SL + LHK +AL + G YLH
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 159
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
++HRDLK NL ++++ VK+GDFGL++ K GTP ++APEVL + + +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 559 SDVFSFGVILWELVTASIPWNN 580
DV+S G I++ L+ P+
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFET 241
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 8/224 (3%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVA 445
+G G+Y +VY G + V + + E + +EI + K L+H N++ ++G+ +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 446 SQERLGIVTEFLPRGSLFKTLHKNYQAL-DIKRRLRM-ALDVARGMNYLHHRNPPIVHRD 503
+ I E +P GSL L + L D ++ + + G+ YLH IVHRD
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHRD 147
Query: 504 LKSSNLLVDK-NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS--NEKSD 560
+K N+L++ + +K+ DFG S ++ GT Q+MAPE++ P + +D
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 207
Query: 561 VFSFGVILWELVTASIPWNNLNLMQVVGV-VGFMDRRLELPEGL 603
++S G + E+ T P+ L Q VG E+PE +
Sbjct: 208 IWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESM 251
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKE-----IDIIKKLRHPNVL 438
+G G +A + SD K F + + +L K +Q+E I I + L H +V+
Sbjct: 23 LGKGGFA----KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 78
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F G + + +V E R SL + LHK +AL + G YLH
Sbjct: 79 GFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 135
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
++HRDLK NL ++++ VK+GDFGL++ K GTP ++APEVL + + +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 559 SDVFSFGVILWELVTASIPWNN 580
DV+S G I++ L+ P+
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFET 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 8/210 (3%)
Query: 384 EEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E+IG G+ VY + G +VA++ + + L EI ++++ ++PN++ ++
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYL 84
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ + L +V E+L GSL + + +D + + + + + +LH ++H
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIH 140
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
RD+KS N+L+ + +VK+ DFG + GTP WMAPEV+ + K D+
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 562 FSFGVILWELVTASIPWNNLNLMQVVGVVG 591
+S G++ E++ P+ N N ++ + ++
Sbjct: 201 WSLGIMAIEMIEGEPPYLNENPLRALYLIA 230
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 107/210 (50%), Gaps = 8/210 (3%)
Query: 384 EEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E+IG G+ VY + G +VA++ + + L EI ++++ ++PN++ ++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYL 83
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ + L +V E+L GSL + + +D + + + + + +LH ++H
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIH 139
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
RD+KS N+L+ + +VK+ DFG + GTP WMAPEV+ + K D+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 562 FSFGVILWELVTASIPWNNLNLMQVVGVVG 591
+S G++ E++ P+ N N ++ + ++
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYIEGTLKN-YQKEIDIIKKLR 433
++ EE+G + VY+G G AV + + EG L+ ++ E + +L+
Sbjct: 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ 87
Query: 434 HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL-----HKNYQALDIKRRLRMALD---- 484
HPNV+ +G V + L ++ + G L + L H + + D R ++ AL+
Sbjct: 88 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 147
Query: 485 ------VARGMNYL--HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL-SSLKNATYLTA 535
+A GM YL HH +VH+DL + N+LV VK+ D GL + A Y
Sbjct: 148 VHLVAQIAAGMEYLSSHH----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 203
Query: 536 KSGRGTP-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
P +WMAPE + + SD++S+GV+LWE+ +
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 30/237 (12%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYIEGTLKN-YQKEIDIIKKLR 433
++ EE+G + VY+G G AV + + EG L+ ++ E + +L+
Sbjct: 11 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ 70
Query: 434 HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL-----HKNYQALDIKRRLRMALD---- 484
HPNV+ +G V + L ++ + G L + L H + + D R ++ AL+
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 485 ------VARGMNYL--HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL-SSLKNATYLTA 535
+A GM YL HH +VH+DL + N+LV VK+ D GL + A Y
Sbjct: 131 VHLVAQIAAGMEYLSSHH----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 186
Query: 536 KSGRGTP-QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASI-PWNNLNLMQVVGVV 590
P +WMAPE + + SD++S+GV+LWE+ + + P+ + VV ++
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 243
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A S GT Q+++PE+L
Sbjct: 151 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ +++ SD+++ G I+++LV P+ N
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 116/226 (51%), Gaps = 34/226 (15%)
Query: 375 IRWEDLQ----LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN--------- 421
R ED++ +GEE+G G +A+V + G+ G EY +K
Sbjct: 5 FRQEDVEDHYEMGEELGSGQFAIVRKCRQKGT--------GKEYAAKFIKKRRLSSSRRG 56
Query: 422 -----YQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIK 476
++E++I++++RHPN++ ++ + ++ E + G LF L + ++L
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTED 115
Query: 477 RRLRMALDVARGMNYLHHRNPPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATY 532
+ + G++YLH + I H DLK N +L+DKN +K+ DFG++ A
Sbjct: 116 EATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 173
Query: 533 LTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
K+ GTP+++APE++ EP ++D++S GVI + L++ + P+
Sbjct: 174 -EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSD--VAVK-----VYFGSEYIEGTLKNYQKEID 427
++ ED L + +G GS+ V+ + ++ A+K V + +E T+ +K +
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM--VEKRV- 70
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+ HP + ++E L V E+L G L + ++ D+ R A ++
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIIL 129
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
G+ +LH + IV+RDLK N+L+DK+ +K+ DFG+ GTP ++AP
Sbjct: 130 GLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAP 187
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPWN 579
E+L + N D +SFGV+L+E++ P++
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 219
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 379 DLQLGEE-IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLR-HPN 436
DL L ++ +G GS+++ + + S+ A V S+ +E N QKEI +K HPN
Sbjct: 11 DLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEA---NTQKEITALKLCEGHPN 67
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-----YQALDIKRRLRMALDVARGMNY 491
++ Q +V E L G LF+ + K +A I R+L A+
Sbjct: 68 IVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS------- 120
Query: 492 LHHRNPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPE 548
H + +VHRDLK NLL + N +K+ DFG + LK K+ T + APE
Sbjct: 121 -HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE 179
Query: 549 VLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
+L +E D++S GVIL+ +++ +P+ +
Sbjct: 180 LLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E+ I++ H NV+ + + L +V EFL G+L + + ++ ++ + L
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLS 149
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
V R ++YLH N ++HRD+KS ++L+ + +K+ DFG + + K GTP W
Sbjct: 150 VLRALSYLH--NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYW 207
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
MAPEV+ P + D++S G+++ E++ P+ N
Sbjct: 208 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFN 243
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 34/231 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNG---SDVAVKVYFGSEYIEGTLKNYQKE--- 425
+WE +LQ G+ +G G++ V G D +KV + ++ T +KE
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV--AVKMLKSTAHADEKEALM 97
Query: 426 --IDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL---------------H 467
+ I+ L +H N++ +GA + ++TE+ G L L H
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 468 KNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS- 526
+ L + L + VA+GM +L +N +HRD+ + N+L+ K+GDFGL+
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 527 -LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
+ ++ Y+ + R +WMAPE + +SDV+S+G++LWE+ + +
Sbjct: 216 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 266
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 8/212 (3%)
Query: 376 RWEDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKL 432
R ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L
Sbjct: 8 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 67
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
HP + E+L + G L K + K + R A ++ + YL
Sbjct: 68 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYL 126
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVL 550
H + I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 127 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 551 RSEPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 185 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 379 DLQLGEEIGLGSYAVVYRGIWNGSDV--AVKVYFGSEYIEGTLKNYQKEID-----IIKK 431
D + IG GS+ V +V AVKV ++ K +K I ++K
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK---KKEEKHIMSERNVLLKN 95
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
++HP ++ + + ++L V +++ G LF L + L+ + R A ++A + Y
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAA-EIASALGY 154
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR 551
LH N IV+RDLK N+L+D + + DFGL T + GTP+++APEVL
Sbjct: 155 LHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQV 586
+P + D + G +L+E++ P+ + N ++
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 8/212 (3%)
Query: 376 RWEDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKL 432
R ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L
Sbjct: 7 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 66
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
HP + E+L + G L K + K + R A ++ + YL
Sbjct: 67 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYL 125
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVL 550
H + I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 126 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 551 RSEPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 184 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 15/210 (7%)
Query: 381 QLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNV 437
+LGE +G G + V+ R + + DVAVKV + + +++E L HP +
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 438 LLFMGAVASQERLG----IVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
+ ++ G IV E++ +L +H + KR + + D + +N+ H
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH 133
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KNATYLTAKSGRGTPQWMAPEV 549
I+HRD+K +N+L+ VKV DFG++ N+ TA + GT Q+++PE
Sbjct: 134 QNG--IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTA-AVIGTAQYLSPEQ 190
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWN 579
R + + +SDV+S G +L+E++T P+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 155
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 156 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 243
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 8/224 (3%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVA 445
+G G+Y +VY G + V + + E + +EI + K L+H N++ ++G+ +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 446 SQERLGIVTEFLPRGSLFKTLHKNYQAL-DIKRRLRM-ALDVARGMNYLHHRNPPIVHRD 503
+ I E +P GSL L + L D ++ + + G+ YLH IVHRD
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHRD 133
Query: 504 LKSSNLLVDK-NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS--NEKSD 560
+K N+L++ + +K+ DFG S ++ GT Q+MAPE++ P + +D
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 193
Query: 561 VFSFGVILWELVTASIPWNNLNLMQVVGV-VGFMDRRLELPEGL 603
++S G + E+ T P+ L Q VG E+PE +
Sbjct: 194 IWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESM 237
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 8/212 (3%)
Query: 376 RWEDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKL 432
R ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L
Sbjct: 5 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 64
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
HP + E+L + G L K + K + R A ++ + YL
Sbjct: 65 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYL 123
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVL 550
H + I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 124 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 551 RSEPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 213
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 151
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL--KNATYLTAKSGRGTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A S GT Q+++PE+L
Sbjct: 152 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGI-WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
E Q E++G G+Y VVY+ G VA+K EG +EI ++K+L HPN
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH-HR 495
++ + + S+ L +V EF+ + L K L +N L + + RG+ + H HR
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-SEP 554
I+HRDLK NLL++ + +K+ DFGL+ + T + AP+VL S+
Sbjct: 140 ---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 555 SNEKSDVFSFGVILWELVTA 574
+ D++S G I E++T
Sbjct: 197 YSTSVDIWSIGCIFAEMITG 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 378 EDLQLGEEIGLGSYAVVYRGI-WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
E Q E++G G+Y VVY+ G VA+K EG +EI ++K+L HPN
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH-HR 495
++ + + S+ L +V EF+ + L K L +N L + + RG+ + H HR
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-SEP 554
I+HRDLK NLL++ + +K+ DFGL+ + T + AP+VL S+
Sbjct: 140 ---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 555 SNEKSDVFSFGVILWELVTA 574
+ D++S G I E++T
Sbjct: 197 YSTSVDIWSIGCIFAEMITG 216
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 8/212 (3%)
Query: 376 RWEDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKL 432
R ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L
Sbjct: 6 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 65
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
HP + E+L + G L K + K + R A ++ + YL
Sbjct: 66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYL 124
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVL 550
H + I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 125 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 551 RSEPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 214
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 15/210 (7%)
Query: 381 QLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNV 437
+LGE +G G + V+ R + + DVAVKV + + +++E L HP +
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 438 LLFMGAVASQERLG----IVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
+ ++ G IV E++ +L +H + KR + + D + +N+ H
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH 133
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KNATYLTAKSGRGTPQWMAPEV 549
I+HRD+K +N+++ VKV DFG++ N+ TA + GT Q+++PE
Sbjct: 134 QNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA-AVIGTAQYLSPEQ 190
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWN 579
R + + +SDV+S G +L+E++T P+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 151 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 112/216 (51%), Gaps = 30/216 (13%)
Query: 381 QLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN--------------YQKEI 426
++GEE+G G +A+V + G+ G EY +K ++E+
Sbjct: 29 EMGEELGSGQFAIVRKCRQKGT--------GKEYAAKFIKKRRLXSSRRGVSREEIEREV 80
Query: 427 DIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVA 486
+I++++RHPN++ ++ + ++ E + G LF L + ++L + +
Sbjct: 81 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQIL 139
Query: 487 RGMNYLHHRNPPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTP 542
G++YLH + I H DLK N +L+DKN +K+ DFG++ A K+ GTP
Sbjct: 140 DGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-EFKNIFGTP 196
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+++APE++ EP ++D++S GVI + L++ + P+
Sbjct: 197 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 112/216 (51%), Gaps = 30/216 (13%)
Query: 381 QLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN--------------YQKEI 426
++GEE+G G +A+V + G+ G EY +K ++E+
Sbjct: 8 EMGEELGSGQFAIVRKCRQKGT--------GKEYAAKFIKKRRLSSSRRGVSREEIEREV 59
Query: 427 DIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVA 486
+I++++RHPN++ ++ + ++ E + G LF L + ++L + +
Sbjct: 60 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQIL 118
Query: 487 RGMNYLHHRNPPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTP 542
G++YLH + I H DLK N +L+DKN +K+ DFG++ A K+ GTP
Sbjct: 119 DGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-EFKNIFGTP 175
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+++APE++ EP ++D++S GVI + L++ + P+
Sbjct: 176 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 151
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 152 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 148
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 149 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ RHP + + + +RL V E+ G LF L + + + R A ++
Sbjct: 204 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA-EIVS 262
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
++YLH +V+RDLK NL++DK+ +K+ DFGL T K+ GTP+++AP
Sbjct: 263 ALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP 321
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
EVL D + GV+++E++ +P+ N + ++ ++ + + P L P
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--LMEEIRFPRTLGP 377
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 15/209 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
++ + EE+G G+++VV R + G + A K+ + + ++E I +KL+HP
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLH 493
N++ ++ + +V + + G LF+ + + Y D ++ L+ + Y H
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SIAYCH 145
Query: 494 HRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSG-RGTPQWMAPEV 549
IVHR+LK NLL+ K VK+ DFGL+ N + A G GTP +++PEV
Sbjct: 146 SNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--EAWHGFAGTPGYLSPEV 201
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPW 578
L+ +P ++ D+++ GVIL+ L+ P+
Sbjct: 202 LKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 151 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 151 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 148
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 149 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 151 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ RHP + + + +RL V E+ G LF L + + + R A ++
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA-EIVS 259
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
++YLH +V+RDLK NL++DK+ +K+ DFGL T K+ GTP+++AP
Sbjct: 260 ALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP 318
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
EVL D + GV+++E++ +P+ N + ++ ++ + + P L P
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--LMEEIRFPRTLGP 374
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 151 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 148
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 149 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 108/210 (51%), Gaps = 8/210 (3%)
Query: 384 EEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E+IG G+ VY + G +VA++ + + L EI ++++ ++PN++ ++
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYL 84
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ + L +V E+L GSL + + +D + + + + + +LH ++H
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIH 140
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
R++KS N+L+ + +VK+ DFG + + GTP WMAPEV+ + K D+
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 562 FSFGVILWELVTASIPWNNLNLMQVVGVVG 591
+S G++ E++ P+ N N ++ + ++
Sbjct: 201 WSLGIMAIEMIEGEPPYLNENPLRALYLIA 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 153
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 154 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 241
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 15/210 (7%)
Query: 381 QLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNV 437
+LGE +G G + V+ R + + DVAVKV + + +++E L HP +
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 438 LLFMGAVASQERLG----IVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
+ ++ G IV E++ +L +H + KR + + D + +N+ H
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH 133
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KNATYLTAKSGRGTPQWMAPEV 549
I+HRD+K +N+++ VKV DFG++ N+ TA + GT Q+++PE
Sbjct: 134 QNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA-AVIGTAQYLSPEQ 190
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWN 579
R + + +SDV+S G +L+E++T P+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ RHP + + + +RL V E+ G LF L + + + R A ++
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA-EIVS 121
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
++YLH +V+RDLK NL++DK+ +K+ DFGL T K GTP+++AP
Sbjct: 122 ALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 180
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
EVL D + GV+++E++ +P+ N + ++ ++ + + P L P
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--LMEEIRFPRTLGP 236
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ RHP + + + +RL V E+ G LF L + + + R A ++
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA-EIVS 119
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
++YLH +V+RDLK NL++DK+ +K+ DFGL T K GTP+++AP
Sbjct: 120 ALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 178
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
EVL D + GV+++E++ +P+ N + ++ ++ + + P L P
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--LMEEIRFPRTLGP 234
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
+++ RHP + + + +RL V E+ G LF L + + + R A ++
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA-EIVS 120
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
++YLH +V+RDLK NL++DK+ +K+ DFGL T K GTP+++AP
Sbjct: 121 ALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 179
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
EVL D + GV+++E++ +P+ N + ++ ++ + + P L P
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--LMEEIRFPRTLGP 235
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 15/209 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
++ + EE+G G+++VV R + G + A K+ + + ++E I +KL+HP
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLH 493
N++ ++ + +V + + G LF+ + + Y D ++ L+ + Y H
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SIAYCH 121
Query: 494 HRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSG-RGTPQWMAPEV 549
IVHR+LK NLL+ K VK+ DFGL+ N + A G GTP +++PEV
Sbjct: 122 SNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--EAWHGFAGTPGYLSPEV 177
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPW 578
L+ +P ++ D+++ GVIL+ L+ P+
Sbjct: 178 LKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 148
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 149 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 15/209 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
++ + EE+G G+++VV R + G + A K+ + + ++E I +KL+HP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLH 493
N++ ++ + +V + + G LF+ + + Y D ++ L+ + Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SIAYCH 122
Query: 494 HRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSG-RGTPQWMAPEV 549
IVHR+LK NLL+ K VK+ DFGL+ N + A G GTP +++PEV
Sbjct: 123 SNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--EAWHGFAGTPGYLSPEV 178
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPW 578
L+ +P ++ D+++ GVIL+ L+ P+
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL--RMALDVARGMNYLH 493
N++ + + ++ +L +V EFL + KT I L + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQD--LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 494 -HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR- 551
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 124 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 552 SEPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 15/209 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
++ + EE+G G+++VV R + G + A K+ + + ++E I +KL+HP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLH 493
N++ ++ + +V + + G LF+ + + Y D ++ L+ + Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SIAYCH 122
Query: 494 HRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSG-RGTPQWMAPEV 549
IVHR+LK NLL+ K VK+ DFGL+ N + A G GTP +++PEV
Sbjct: 123 SNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS--EAWHGFAGTPGYLSPEV 178
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPW 578
L+ +P ++ D+++ GVIL+ L+ P+
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 132
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 133 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 220
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 147
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYLTAKSGRGTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + + A S GT Q+++PE+L
Sbjct: 148 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYI-EGTLKNYQKEIDIIKKLRH 434
ED + G+ +G GS++ V+ R + + A+K+ I E + +E D++ +L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + E+L + G L K + K + R A ++ + YLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 147
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR--GTPQWMAPEVLRS 552
+ I+HRDLK N+L++++ +++ DFG + + + A++ GT Q+++PE+L
Sbjct: 148 KG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+ + + SD+++ G I+++LV P+ N
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 380 LQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNV 437
+ E +G G+++ V+ G AVK + ++G + + EI +++K++H N+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKC-IPKKALKGKESSIENEIAVLRKIKHENI 82
Query: 438 LLFMGAVASQERLGIVTEFLPRGSLFKTLHKN--YQALDIKRRLRMALDVARGMNYLHHR 495
+ S L +V + + G LF + + Y D +R LD + YLH
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD---AVYYLHRM 139
Query: 496 NPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
IVHRDLK NLL D+ + + DFGLS ++ + + + GTP ++APEVL
Sbjct: 140 G--IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMS-TACGTPGYVAPEVLAQ 196
Query: 553 EPSNEKSDVFSFGVILWELVTASIPWNNLN 582
+P ++ D +S GVI + L+ P+ + N
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYPPFYDEN 226
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 115/221 (52%), Gaps = 12/221 (5%)
Query: 365 NETSCATDGGIRWEDLQLGEEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLK-N 421
N S DG + Q+ + +G GS+ V G VA+K+ + ++
Sbjct: 1 NPKSSLADGA-HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR 59
Query: 422 YQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM 481
++EI ++ LRHP+++ + S++ + +V E+ LF + + + + + R R
Sbjct: 60 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RF 117
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRG 540
+ + Y H IVHRDLK NLL+D++ VK+ DFGLS+ + + +L K+ G
Sbjct: 118 FQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCG 173
Query: 541 TPQWMAPEVLRSEP-SNEKSDVFSFGVILWELVTASIPWNN 580
+P + APEV+ + + + DV+S GVIL+ ++ +P+++
Sbjct: 174 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 109/206 (52%), Gaps = 14/206 (6%)
Query: 381 QLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL-RHPNVLL 439
++ E+IG+GSY+V R I +++ F + I+ + ++ +EI+I+ + +HPN++
Sbjct: 25 EVKEDIGVGSYSVCKRCIHKATNME----FAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 440 FMGAVASQERLGIVTEFLPRGSLF-KTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
+ + +VTE + G L K L + + + + + + + YLH +
Sbjct: 81 LKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHAQG-- 136
Query: 499 IVHRDLKSSNLL-VDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+VHRDLK SN+L VD++ ++++ DFG + A + T ++APEVL +
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 555 SNEKSDVFSFGVILWELVTASIPWNN 580
+ D++S GV+L+ ++T P+ N
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFAN 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 115/221 (52%), Gaps = 12/221 (5%)
Query: 365 NETSCATDGGIRWEDLQLGEEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLK-N 421
N S DG + Q+ + +G GS+ V G VA+K+ + ++
Sbjct: 2 NPKSSLADGA-HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR 60
Query: 422 YQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM 481
++EI ++ LRHP+++ + S++ + +V E+ LF + + + + + R R
Sbjct: 61 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RF 118
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRG 540
+ + Y H IVHRDLK NLL+D++ VK+ DFGLS+ + + +L K+ G
Sbjct: 119 FQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCG 174
Query: 541 TPQWMAPEVLRSEP-SNEKSDVFSFGVILWELVTASIPWNN 580
+P + APEV+ + + + DV+S GVIL+ ++ +P+++
Sbjct: 175 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 381 QLGEEIGLGSYAV--VYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL 438
+L ++IG G++ V + R VAVK E I+ +N ++EI + LRHPN++
Sbjct: 22 ELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKID---ENVKREIINHRSLRHPNIV 78
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F + + L IV E+ G LF+ + + + + R + G++Y H
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYAHAMQ-- 135
Query: 499 IVHRDLKSSNLLVDKNWT--VKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV-LRSEPS 555
+ HRDLK N L+D + +K+ DFG S + + KS GTP ++APEV L+ E
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSK-ASVLHSQPKSAVGTPAYIAPEVLLKKEYD 194
Query: 556 NEKSDVFSFGVILWELVTASIPWNN 580
+ +DV+S GV L+ ++ + P+ +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 30/216 (13%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDI--IKKLRHPNV 437
LQL E G + V++ VAVK++ + +++Q E ++ + ++H N+
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK-----QSWQNEYEVYSLPGMKHENI 80
Query: 438 LLFMGA----VASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
L F+GA + L ++T F +GSL L N + +A +ARG+ YLH
Sbjct: 81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH 138
Query: 494 H--------RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR---GTP 542
P I HRD+KS N+L+ N T + DFGL +LK +A GT
Sbjct: 139 EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL-ALKFEAGKSAGDTHGQVGTR 197
Query: 543 QWMAPEVLRSEPSNEKS-----DVFSFGVILWELVT 573
++MAPEVL + ++ D+++ G++LWEL +
Sbjct: 198 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
++ QL E+IG G+++VV R + G + A K+ + + ++E I + L+H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYLH 493
N++ +++ + +V + + G LF+ + + Y D ++ L+ LH
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-----LH 118
Query: 494 HRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVL 550
+VHRDLK NLL+ K VK+ DFGL+ GTP +++PEVL
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 551 RSEPSNEKSDVFSFGVILWELVTASIPW 578
R E + D+++ GVIL+ L+ P+
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 381 QLGEEIGLGSYAV--VYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL 438
+L ++IG G++ V + R + VAVK E I+ +N ++EI + LRHPN++
Sbjct: 21 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID---ENVKREIINHRSLRHPNIV 77
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F + + L IV E+ G LF+ + + + + R + G++Y H
Sbjct: 78 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCHAMQ-- 134
Query: 499 IVHRDLKSSNLLVDKNWT--VKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV-LRSEPS 555
+ HRDLK N L+D + +K+ DFG S + + KS GTP ++APEV L+ E
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEVLLKKEYD 193
Query: 556 NEKSDVFSFGVILWELVTASIPWNN 580
+ +DV+S GV L+ ++ + P+ +
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYPFED 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 381 QLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNV 437
+LGE +G G + V+ R + DVAVKV + + +++E L HP +
Sbjct: 15 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 438 LLFMGAVASQERLG----IVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
+ ++ G IV E++ +L +H + KR + + D + +N+ H
Sbjct: 75 VAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH 133
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KNATYLTAKSGRGTPQWMAPEV 549
I+HRD+K +N+++ VKV DFG++ N+ TA + GT Q+++PE
Sbjct: 134 QNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA-AVIGTAQYLSPEQ 190
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWN 579
R + + +SDV+S G +L+E++T P+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 117/229 (51%), Gaps = 25/229 (10%)
Query: 377 WEDLQLGEEIGLGSYAVVYRGIWNGS--DVAVKVY-------FGSEYIEGTLKNYQKEID 427
+E+ + E +G G +VV R I + + AVK+ F +E ++ + KE+D
Sbjct: 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 428 IIKKLR-HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRR--LRMALD 484
I++K+ HPN++ + +V + + +G LF L + + + R +R L+
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
V ++ L+ IVHRDLK N+L+D + +K+ DFG S + +S GTP +
Sbjct: 136 VICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLRSVCGTPSY 189
Query: 545 MAPEVLRSEPSN------EKSDVFSFGVILWELVTASIP-WNNLNLMQV 586
+APE++ ++ ++ D++S GVI++ L+ S P W+ ++ +
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 423 QKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFK-TLHKNYQALDIKRRLRM 481
++EI +K LRHP+++ + + + +V E+ G LF + K D RR
Sbjct: 57 EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQ 115
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRG 540
+ A + Y H IVHRDLK NLL+D N VK+ DFGLS+ + + +L K+ G
Sbjct: 116 QIICA--IEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL--KTSCG 169
Query: 541 TPQWMAPEVLRSEP-SNEKSDVFSFGVILWELVTASIPWNN 580
+P + APEV+ + + + DV+S G++L+ ++ +P+++
Sbjct: 170 SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 35/227 (15%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH--RALM 78
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSL-------------FKTLHK 468
E+ I+ + H NV+ +GA L ++ EF G+L +K L+K
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK 138
Query: 469 NYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-- 526
++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL+
Sbjct: 139 DF--LTLEHLIXYSFQVAKGMEFLASRK--XIHRDLAARNILLSEKNVVKIXDFGLARDI 194
Query: 527 LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
K+ Y+ R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 35/227 (15%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH--RALM 78
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSL-------------FKTLHK 468
E+ I+ + H NV+ +GA L ++ EF G+L +K L+K
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK 138
Query: 469 NYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-- 526
++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL+
Sbjct: 139 DF--LTLEHLICYSFQVAKGMEFLASRK--XIHRDLAARNILLSEKNVVKICDFGLARDI 194
Query: 527 LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
K+ Y+ R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 384 EEIGLGSYAV--VYRGIWNGSDVAVKVYFGSEYIE---GTLKNYQKEIDIIKKLRHPNVL 438
++IG G++ V + R VAVK YIE +N Q+EI + LRHPN++
Sbjct: 26 KDIGSGNFGVARLMRDKLTKELVAVK------YIERGAAIDENVQREIINHRSLRHPNIV 79
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F + + L I+ E+ G L++ + + + + R + G++Y H
Sbjct: 80 RFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ-QLLSGVSYCHSMQ-- 136
Query: 499 IVHRDLKSSNLLVDKNWT--VKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV-LRSEPS 555
I HRDLK N L+D + +K+ DFG S + + KS GTP ++APEV LR E
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEVLLRQEYD 195
Query: 556 NEKSDVFSFGVILWELVTASIPWNN 580
+ +DV+S GV L+ ++ + P+ +
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 115/233 (49%), Gaps = 12/233 (5%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYR-----GIWNGSDVAVKVYFGSEYIEGT--LKNYQKEID 427
IR E +L +G G Y V++ G G A+KV + + + + E +
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I+++++HP ++ + A + +L ++ E+L G LF L + ++ +A +++
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-EISM 132
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
+ +LH + I++RDLK N++++ VK+ DFGL + GT ++MAP
Sbjct: 133 ALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAP 190
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELP 600
E+L N D +S G ++++++T + P+ N + + + + +L LP
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI--LKCKLNLP 241
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 182
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVT 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 381 QLGEEIGLGSYAV--VYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL 438
+L ++IG G++ V + R + VAVK E I N ++EI + LRHPN++
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA---NVKREIINHRSLRHPNIV 78
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F + + L IV E+ G LF+ + + + + R + G++Y H
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCHAMQ-- 135
Query: 499 IVHRDLKSSNLLVDKNWT--VKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV-LRSEPS 555
+ HRDLK N L+D + +K+ DFG S + + KS GTP ++APEV L+ E
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 556 NEKSDVFSFGVILWELVTASIPWNN 580
+ +DV+S GV L+ ++ + P+ +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 179
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 110/205 (53%), Gaps = 11/205 (5%)
Query: 381 QLGEEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNV 437
Q+ + +G GS+ V G VA+K+ + ++ ++EI ++ LRHP++
Sbjct: 11 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 70
Query: 438 LLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
+ + S++ + +V E+ LF + + + + + R R + + Y H
Sbjct: 71 IKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRHK- 127
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEP-S 555
IVHRDLK NLL+D++ VK+ DFGLS+ + + +L K+ G+P + APEV+ + +
Sbjct: 128 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCGSPNYAAPEVISGKLYA 184
Query: 556 NEKSDVFSFGVILWELVTASIPWNN 580
+ DV+S GVIL+ ++ +P+++
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 381 QLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNV 437
+LGE +G G + V+ R + DVAVKV + + +++E L HP +
Sbjct: 15 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 438 LLFMGAVASQERLG----IVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
+ ++ G IV E++ +L +H + KR + + D + +N+ H
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH 133
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KNATYLTAKSGRGTPQWMAPEV 549
I+HRD+K +N+++ VKV DFG++ N+ TA + GT Q+++PE
Sbjct: 134 QNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA-AVIGTAQYLSPEQ 190
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWN 579
R + + +SDV+S G +L+E++T P+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 185
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVT 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 124 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVT 201
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 110/205 (53%), Gaps = 11/205 (5%)
Query: 381 QLGEEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNV 437
Q+ + +G GS+ V G VA+K+ + ++ ++EI ++ LRHP++
Sbjct: 7 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 66
Query: 438 LLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
+ + S++ + +V E+ LF + + + + + R R + + Y H
Sbjct: 67 IKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRHK- 123
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEP-S 555
IVHRDLK NLL+D++ VK+ DFGLS+ + + +L K+ G+P + APEV+ + +
Sbjct: 124 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCGSPNYAAPEVISGKLYA 180
Query: 556 NEKSDVFSFGVILWELVTASIPWNN 580
+ DV+S GVIL+ ++ +P+++
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 182
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVT 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 22/222 (9%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVY------FGSEYIEGTLKNYQKEIDIIKKLR-HPN 436
IG G +VV R + G + AVK+ E +E + ++E I++++ HP+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
++ + + S + +V + + +G LF L + AL K + + +++LH N
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLHANN 220
Query: 497 PPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLR---- 551
IVHRDLK N+L+D N +++ DFG S L+ L + GTP ++APE+L+
Sbjct: 221 --IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL--RELCGTPGYLAPEILKCSMD 276
Query: 552 -SEPSNEKS-DVFSFGVILWELVTASIP-WNNLNLMQVVGVV 590
+ P K D+++ GVIL+ L+ S P W+ ++ + ++
Sbjct: 277 ETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM 318
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSE 553
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 185
Query: 554 PSNEKS-DVFSFGVILWELVT 573
+ D++S G I E+VT
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVT 206
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 381 QLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL 438
Q +++G G+Y V R + A+K+ + + +E+ ++K L HPN++
Sbjct: 40 QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIM 99
Query: 439 LFMGAVASQERLGIVTEFLPRGSLF-KTLHK-NYQALDIKRRLRMALDVARGMNYLHHRN 496
+ +V E G LF + +H+ + +D ++ L G+ YLH N
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLS---GVTYLHKHN 156
Query: 497 PPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSL-KNATYLTAKSGRGTPQWMAPEVLRS 552
IVHRDLK NLL+ +K+ +K+ DFGLS++ +N + K GT ++APEVLR
Sbjct: 157 --IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM--KERLGTAYYIAPEVLR- 211
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
+ +EK DV+S GVIL+ L+ P+
Sbjct: 212 KKYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD-----VAVKVYFGSEYIEGTLKNYQKEIDIIKKL 432
+ LG +G G + V D VAVK+ ++ + +E +K+
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 433 RHPNVLLFMGAVASQERLG------IVTEFLPRGSLFKTLH-----KNYQALDIKRRLRM 481
HP+V +G G ++ F+ G L L +N L ++ +R
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTAKSGRG 540
+D+A GM YL RN +HRDL + N ++ ++ TV V DFGLS + + Y
Sbjct: 143 MVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 541 TP-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
P +W+A E L SDV++FGV +WE++T
Sbjct: 201 LPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E +++++L +P ++ +G + E +V E G L K L +N D K + +
Sbjct: 78 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 135
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKS-GRGT 541
V+ GM YL N VHRDL + N+L+ K+ DFGLS A Y A++ G+
Sbjct: 136 VSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 542 PQWMAPEVLRSEPSNEKSDVFSFGVILWE 570
+W APE + + KSDV+SFGV++WE
Sbjct: 194 VKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E +++++L +P ++ +G + E +V E G L K L +N D K + +
Sbjct: 78 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 135
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKS-GRGT 541
V+ GM YL N VHRDL + N+L+ K+ DFGLS A Y A++ G+
Sbjct: 136 VSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 542 PQWMAPEVLRSEPSNEKSDVFSFGVILWE 570
+W APE + + KSDV+SFGV++WE
Sbjct: 194 VKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSE 553
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 178
Query: 554 PSNEKS-DVFSFGVILWELVT 573
+ D++S G I E+VT
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD------IKRRLRMALDVARGM 489
N++ + + ++ +L +V EFL S+ + AL IK L + +G+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 119
Query: 490 NYLH-HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPE 548
+ H HR ++HRDLK NLL++ +K+ DFGL+ T T + APE
Sbjct: 120 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 549 VLR-SEPSNEKSDVFSFGVILWELVT 573
+L + + D++S G I E+VT
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 381 QLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLK-NYQKEIDIIKKLRHPNV 437
+LGE +G G + V+ R + DVAVKV + + +++E L HP +
Sbjct: 32 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 91
Query: 438 LLFMGAVASQERLG----IVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
+ ++ G IV E++ +L +H + KR + + D + +N+ H
Sbjct: 92 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH 150
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL----KNATYLTAKSGRGTPQWMAPEV 549
I+HRD+K +N+++ VKV DFG++ N+ TA + GT Q+++PE
Sbjct: 151 QNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA-AVIGTAQYLSPEQ 207
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWN 579
R + + +SDV+S G +L+E++T P+
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 237
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD------IKRRLRMALDVARGM 489
N++ + + ++ +L +V EFL S+ + AL IK L + +G+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYL---FQLLQGL 117
Query: 490 NYLH-HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPE 548
+ H HR ++HRDLK NLL++ +K+ DFGL+ T T + APE
Sbjct: 118 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 549 VLR-SEPSNEKSDVFSFGVILWELVT 573
+L + + D++S G I E+VT
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E +++++L +P ++ +G + E +V E G L K L +N D K + +
Sbjct: 58 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 115
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKS-GRGT 541
V+ GM YL N VHRDL + N+L+ K+ DFGLS A Y A++ G+
Sbjct: 116 VSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 542 PQWMAPEVLRSEPSNEKSDVFSFGVILWE 570
+W APE + + KSDV+SFGV++WE
Sbjct: 174 VKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH-H 494
N++ + + ++ +L +V EFL + + + + +G+ + H H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-SE 553
R ++HRDLK NLL++ +K+ DFGL+ T T + APE+L +
Sbjct: 123 R---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 554 PSNEKSDVFSFGVILWELVT 573
+ D++S G I E+VT
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 114/233 (48%), Gaps = 12/233 (5%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYR-----GIWNGSDVAVKVYFGSEYIEGT--LKNYQKEID 427
IR E +L +G G Y V++ G G A+KV + + + + E +
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I+++++HP ++ + A + +L ++ E+L G LF L + ++ +A +++
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-EISM 132
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
+ +LH + I++RDLK N++++ VK+ DFGL GT ++MAP
Sbjct: 133 ALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAP 190
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELP 600
E+L N D +S G ++++++T + P+ N + + + + +L LP
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI--LKCKLNLP 241
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E +++++L +P ++ +G + E +V E G L K L +N D K + +
Sbjct: 76 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 133
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKS-GRGT 541
V+ GM YL N VHRDL + N+L+ K+ DFGLS A Y A++ G+
Sbjct: 134 VSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 191
Query: 542 PQWMAPEVLRSEPSNEKSDVFSFGVILWE 570
+W APE + + KSDV+SFGV++WE
Sbjct: 192 VKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 384 EEIGLGSYAVVYRGIWN---GSDVAVKVYFGSEYIEGTLKN-YQKEIDIIKKLRHPNVLL 439
+E+G G++ V +G + +E + LK+ E +++++L +P ++
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+G + E +V E G L K L +N D K + + V+ GM YL N
Sbjct: 435 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN--F 490
Query: 500 VHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKS-GRGTPQWMAPEVLRSEPSN 556
VHRDL + N+L+ K+ DFGLS A Y A++ G+ +W APE + +
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 557 EKSDVFSFGVILWELVT 573
KSDV+SFGV++WE +
Sbjct: 551 SKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E +++++L +P ++ +G + E +V E G L K L +N D K + +
Sbjct: 421 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 478
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKS-GRGT 541
V+ GM YL N VHRDL + N+L+ K+ DFGLS A Y A++ G+
Sbjct: 479 VSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 542 PQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+W APE + + KSDV+SFGV++WE +
Sbjct: 537 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E +++++L +P ++ +G + E +V E G L K L +N D K + +
Sbjct: 62 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 119
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKS-GRGT 541
V+ GM YL N VHRDL + N+L+ K+ DFGLS A Y A++ G+
Sbjct: 120 VSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 542 PQWMAPEVLRSEPSNEKSDVFSFGVILWE 570
+W APE + + KSDV+SFGV++WE
Sbjct: 178 VKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E +++++L +P ++ +G + E +V E G L K L +N D K + +
Sbjct: 56 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 113
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKS-GRGT 541
V+ GM YL N VHRDL + N+L+ K+ DFGLS A Y A++ G+
Sbjct: 114 VSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 171
Query: 542 PQWMAPEVLRSEPSNEKSDVFSFGVILWE 570
+W APE + + KSDV+SFGV++WE
Sbjct: 172 VKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 7/200 (3%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH-H 494
N++ + + ++ +L +V EFL + + + +G+ + H H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-SE 553
R ++HRDLK NLL++ +K+ DFGL+ T T + APE+L +
Sbjct: 126 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 554 PSNEKSDVFSFGVILWELVT 573
+ D++S G I E+VT
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E +++++L +P ++ +G + E +V E G L K L +N D K + +
Sbjct: 68 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 125
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA--TYLTAKS-GRGT 541
V+ GM YL N VHRDL + N+L+ K+ DFGLS A Y A++ G+
Sbjct: 126 VSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 542 PQWMAPEVLRSEPSNEKSDVFSFGVILWE 570
+W APE + + KSDV+SFGV++WE
Sbjct: 184 VKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 116/229 (50%), Gaps = 25/229 (10%)
Query: 377 WEDLQLGEEIGLGSYAVVYRGIWNGS--DVAVKVY-------FGSEYIEGTLKNYQKEID 427
+E+ + E +G G +VV R I + + AVK+ F +E ++ + KE+D
Sbjct: 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 428 IIKKLR-HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRR--LRMALD 484
I++K+ HPN++ + +V + + +G LF L + + + R +R L+
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
V ++ L+ IVHRDLK N+L+D + +K+ DFG S + + GTP +
Sbjct: 136 VICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLREVCGTPSY 189
Query: 545 MAPEVLRSEPSN------EKSDVFSFGVILWELVTASIP-WNNLNLMQV 586
+APE++ ++ ++ D++S GVI++ L+ S P W+ ++ +
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD------IKRRLRMALDVARGM 489
N++ + + ++ +L +V EFL S+ + AL IK L + +G+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYL---FQLLQGL 118
Query: 490 NYLH-HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPE 548
+ H HR ++HRDLK NLL++ +K+ DFGL+ T T + APE
Sbjct: 119 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 549 VLR-SEPSNEKSDVFSFGVILWELVT 573
+L + + D++S G I E+VT
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E +++++L +P ++ +G + E +V E G L K L +N D K + +
Sbjct: 62 EANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 119
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNA---TYLTAKSGRGT 541
V+ GM YL N VHRDL + N+L+ K+ DFGLS A Y G+
Sbjct: 120 VSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 542 PQWMAPEVLRSEPSNEKSDVFSFGVILWE 570
+W APE + + KSDV+SFGV++WE
Sbjct: 178 VKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 116/229 (50%), Gaps = 25/229 (10%)
Query: 377 WEDLQLGEEIGLGSYAVVYRGIWNGS--DVAVKVY-------FGSEYIEGTLKNYQKEID 427
+E+ + E +G G +VV R I + + AVK+ F +E ++ + KE+D
Sbjct: 3 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 62
Query: 428 IIKKLR-HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRR--LRMALD 484
I++K+ HPN++ + +V + + +G LF L + + + R +R L+
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 122
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
V ++ L+ IVHRDLK N+L+D + +K+ DFG S + + GTP +
Sbjct: 123 VICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-KLREVCGTPSY 176
Query: 545 MAPEVLRSEPSN------EKSDVFSFGVILWELVTASIP-WNNLNLMQV 586
+APE++ ++ ++ D++S GVI++ L+ S P W+ ++ +
Sbjct: 177 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 116/230 (50%), Gaps = 12/230 (5%)
Query: 381 QLGEEIGLGSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL 438
+L E IG G +A V I G VA+K+ + L + EI+ +K LRH ++
Sbjct: 13 ELHETIGTGGFAKVKLACHILTGEMVAIKI-MDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
+ + ++ +V E+ P G LF + + + + R+ + + Y+H +
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR-QIVSAVAYVHSQG-- 128
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLSSLK--NATYLTAKSGRGTPQWMAPEVLRSEPS- 555
HRDLK NLL D+ +K+ DFGL + N Y ++ G+ + APE+++ +
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY-HLQTCCGSLAYAAPELIQGKSYL 187
Query: 556 NEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELPEGLDP 605
++DV+S G++L+ L+ +P+++ N+M + + M + ++P+ L P
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKI--MRGKYDVPKWLSP 235
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAV-KVYFGSEYIEGTLKNYQKEIDIIKKLRH 434
E+ Q E+IG G+Y VVY R G VA+ K+ +E EG +EI ++K+L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTE-TEGVPSTAIREISLLKELNH 61
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH 493
PN++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 494 -HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR- 551
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 552 SEPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAV-KVYFGSEYIEGTLKNYQKEIDIIKKLRH 434
E+ Q E+IG G+Y VVY R G VA+ K+ +E EG +EI ++K+L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTE-TEGVPSTAIREISLLKELNH 60
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH 493
PN++ + + ++ +L +V EFL L K + + + + + +G+ + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 494 -HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR- 551
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 552 SEPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 31/227 (13%)
Query: 389 GSYAVVYRG--IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLR-HPNVLLFMGAVA 445
G +A VY + +G + A+K +E E + +E+ +KKL HPN++ F A +
Sbjct: 39 GGFAFVYEAQDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS 96
Query: 446 --------SQERLGIVTEFLPRGSLFKTLHK--NYQALDIKRRLRMALDVARGMNYLHHR 495
Q ++TE L +G L + L K + L L++ R + ++H +
Sbjct: 97 IGKEESDTGQAEFLLLTE-LCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFG------------LSSLKNATYLTAKSGRGTPQ 543
PPI+HRDLK NLL+ T+K+ DFG S+ + A + TP
Sbjct: 156 KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPM 215
Query: 544 WMAPEVL---RSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVV 587
+ PE++ + P EK D+++ G IL+ L P+ + +++V
Sbjct: 216 YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV 262
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 39/231 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L+LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALM 69
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSL-------------FKT--- 465
E+ I+ + H NV+ +GA L ++TEF G+L +K
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 466 -LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL 524
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL
Sbjct: 130 DLYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGL 185
Query: 525 SS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ K+ Y+ R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 37/237 (15%)
Query: 375 IRWE----DLQLGEEIGLGSY-----AVVYRGIWNGSDVAVKVYFGSEYIEGTLKN-YQK 424
++WE +L+ G+ +G G++ A Y G + V V E + + +
Sbjct: 38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMS 97
Query: 425 EIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTL----------------- 466
E+ ++ +L H N++ +GA + ++ E+ G L L
Sbjct: 98 ELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 157
Query: 467 -----HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGD 521
++ L + L A VA+GM +L ++ VHRDL + N+LV VK+ D
Sbjct: 158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVVKICD 215
Query: 522 FGLSS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
FGL+ + ++ Y+ + R +WMAPE L KSDV+S+G++LWE+ + +
Sbjct: 216 FGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 272
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 54/249 (21%)
Query: 386 IGLGSYAVVYRGIWNGSDV--AVKVYFGSEYIEGTLKNYQK---EIDIIKKLRHPNVLLF 440
IG GSY VV I N + A+K+ ++ + K+ ++ E+ ++KKL HPN+
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTL---------------------------------- 466
++ + +V E G L L
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 467 -HKNYQALDIKRRLRMALDVAR----GMNYLHHRNPPIVHRDLKSSNLL--VDKNWTVKV 519
H ++LD +R ++ ++ R ++YLH N I HRD+K N L +K++ +K+
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLH--NQGICHRDIKPENFLFSTNKSFEIKL 211
Query: 520 GDFGLSS----LKNATYLTAKSGRGTPQWMAPEVLRS--EPSNEKSDVFSFGVILWELVT 573
DFGLS L N Y + GTP ++APEVL + E K D +S GV+L L+
Sbjct: 212 VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM 271
Query: 574 ASIPWNNLN 582
++P+ +N
Sbjct: 272 GAVPFPGVN 280
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH--- 434
+D L IG GSYA V +D ++Y ++ L N ++ID ++ +H
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTD---RIY-AMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 435 -----PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGM 489
P ++ ++ RL V E++ G L + + + + R A +++ +
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLAL 166
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
NYLH R I++RDLK N+L+D +K+ D+G+ T + GTP ++APE+
Sbjct: 167 NYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI 224
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWN 579
LR E D ++ GV+++E++ P++
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 39/231 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L+LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALM 69
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSL-------------FKT--- 465
E+ I+ + H NV+ +GA L ++TEF G+L +K
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 466 -LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL 524
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL
Sbjct: 130 DLYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGL 185
Query: 525 SS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ K+ Y+ R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQ--------------KEID 427
+GEE+G G +A+V + + G EY +K Q +E+
Sbjct: 16 IGEELGSGQFAIVKKCREKST--------GLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I++++ HPN++ ++ + ++ E + G LF L + ++L + +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILD 126
Query: 488 GMNYLHHRNPPIVHRDLKSSN-LLVDKNWTV---KVGDFGLS-SLKNATYLTAKSGRGTP 542
G+NYLH + I H DLK N +L+DKN + K+ DFGL+ +++ K+ GTP
Sbjct: 127 GVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTP 182
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+++APE++ EP ++D++S GVI + L++ + P+
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 381 QLGEEIGLGSYAV--VYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL 438
+L ++IG G++ V + R + VAVK E I+ +N ++EI + LRHPN++
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID---ENVKREIINHRSLRHPNIV 78
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F + + L IV E+ G LF+ + + + + R + G++Y H
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCHAMQ-- 135
Query: 499 IVHRDLKSSNLLVDKNWT--VKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV-LRSEPS 555
+ HRDLK N L+D + +K+ FG S + + KS GTP ++APEV L+ E
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 556 NEKSDVFSFGVILWELVTASIPWNN 580
+ +DV+S GV L+ ++ + P+ +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 106/206 (51%), Gaps = 14/206 (6%)
Query: 381 QLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKL-RHPNVLL 439
++ E+IG+GSY+V R I ++ F + I+ + ++ +EI+I+ + +HPN++
Sbjct: 25 EVKEDIGVGSYSVCKRCIHKATNXE----FAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 440 FMGAVASQERLGIVTEFLPRGSLF-KTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
+ + +VTE G L K L + + + + + + + YLH +
Sbjct: 81 LKDVYDDGKYVYVVTELXKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHAQG-- 136
Query: 499 IVHRDLKSSNLL-VDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+VHRDLK SN+L VD++ ++++ DFG + A + T ++APEVL +
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQG 196
Query: 555 SNEKSDVFSFGVILWELVTASIPWNN 580
+ D++S GV+L+ +T P+ N
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPFAN 222
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
+ EE+G G++ VV+R + F E + +KEI + LRHP ++
Sbjct: 55 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 114
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
A + ++ EF+ G LF+ + + + + V +G+ ++H N VH
Sbjct: 115 DAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN--YVH 172
Query: 502 RDLKSSNLL--VDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKS 559
DLK N++ ++ +K+ DFGL++ + + K GT ++ APEV +P +
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAEGKPVGYYT 231
Query: 560 DVFSFGVILWELVTASIPWNNLN 582
D++S GV+ + L++ P+ N
Sbjct: 232 DMWSVGVLSYILLSGLSPFGGEN 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH--- 434
+D L IG GSYA V +D ++Y + ++ L N ++ID ++ +H
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTD---RIY-AMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 435 -----PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGM 489
P ++ ++ RL V E++ G L + + + + R A +++ +
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLAL 119
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
NYLH R I++RDLK N+L+D +K+ D+G+ T GTP ++APE+
Sbjct: 120 NYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI 177
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWN 579
LR E D ++ GV+++E++ P++
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
+ EE+G G++ VV+R + F E + +KEI + LRHP ++
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 220
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
A + ++ EF+ G LF+ + + + + V +G+ ++H N VH
Sbjct: 221 DAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN--YVH 278
Query: 502 RDLKSSNLL--VDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKS 559
DLK N++ ++ +K+ DFGL++ + + K GT ++ APEV +P +
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAEGKPVGYYT 337
Query: 560 DVFSFGVILWELVTASIPWNNLN 582
D++S GV+ + L++ P+ N
Sbjct: 338 DMWSVGVLSYILLSGLSPFGGEN 360
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH--- 434
+D L IG GSYA V +D ++Y + ++ L N ++ID ++ +H
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTD---RIY-AMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 435 -----PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGM 489
P ++ ++ RL V E++ G L + + + + R A +++ +
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLAL 134
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
NYLH R I++RDLK N+L+D +K+ D+G+ T GTP ++APE+
Sbjct: 135 NYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI 192
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWN 579
LR E D ++ GV+++E++ P++
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH--- 434
+D L IG GSYA V +D ++Y + ++ L N ++ID ++ +H
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTD---RIY-AMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 435 -----PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGM 489
P ++ ++ RL V E++ G L + + + + R A +++ +
Sbjct: 65 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLAL 123
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
NYLH R I++RDLK N+L+D +K+ D+G+ T GTP ++APE+
Sbjct: 124 NYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI 181
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWN 579
LR E D ++ GV+++E++ P++
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL--RMALDVARGMNYLH 493
N++ + + ++ +L +V E + + KT I L + +G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQD--LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 494 -HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR- 551
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 552 SEPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 384 EEIGLGSY--AVVYRGIWNGSDVAVKVYFGSEYI----EGTLKNYQKEIDIIKKLRHPNV 437
+++G G+Y ++ + G++ A+K+ S G L + E+ ++K+L HPN+
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD---EVAVLKQLDHPNI 66
Query: 438 LLFMGAVASQERLGIVTEFLPRGSLFK--TLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
+ + +V E G LF L + + +D ++ L G YLH
Sbjct: 67 MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLHKH 123
Query: 496 NPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
N IVHRDLK NLL++ ++ +K+ DFGLS+ K GT ++APEVLR
Sbjct: 124 N--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG-KMKERLGTAYYIAPEVLR- 179
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
+ +EK DV+S GVIL+ L+ P+
Sbjct: 180 KKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFK--TLHKNYQALDIKRRLRMA 482
E+ ++K+L HPN++ + +V E G LF L + + +D ++
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 130
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGR 539
L G YLH N IVHRDLK NLL++ ++ +K+ DFGLS+ K
Sbjct: 131 LS---GTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG-KMKERL 184
Query: 540 GTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GT ++APEVLR + +EK DV+S GVIL+ L+ P+
Sbjct: 185 GTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPF 222
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 133
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 134 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 133
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 134 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 190
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 39/231 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L+LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALM 78
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSL-------------FKT--- 465
E+ I+ + H NV+ +GA L ++ EF G+L +K
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 466 -LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL 524
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL
Sbjct: 139 DLYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGL 194
Query: 525 SS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ K+ Y+ R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 195 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 39/231 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L+LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALM 80
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSLF-----------------K 464
E+ I+ + H NV+ +GA L ++ EF G+L +
Sbjct: 81 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPE 140
Query: 465 TLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL 524
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL
Sbjct: 141 DLYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGL 196
Query: 525 SS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ K+ Y+ R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 197 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 384 EEIGLGSYAVVYRGIWN-GSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
E+IG G+Y VVY+ N G A+K + EG +EI I+K+L+H N++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ +++RL +V E L + L K L L+ L + G+ Y H R ++HR
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHR 124
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-SEPSNEKSDV 561
DLK NLL+++ +K+ DFGL+ T + AP+VL S+ + D+
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 562 FSFGVILWELVTASIPWNNLN----LMQVVGVVG 591
+S G I E+V + + ++ LM++ ++G
Sbjct: 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 39/231 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L+LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALM 115
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSL-------------FKT--- 465
E+ I+ + H NV+ +GA L ++ EF G+L +K
Sbjct: 116 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 175
Query: 466 -LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL 524
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL
Sbjct: 176 DLYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGL 231
Query: 525 SS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ K+ Y+ R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 232 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 373 GGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN-YQKEIDIIKK 431
G ++ +D + E+G G+ VV++ S + + I+ ++N +E+ ++ +
Sbjct: 63 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 122
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL--RMALDVARGM 489
P ++ F GA S + I E + GSL + L K A I ++ ++++ V +G+
Sbjct: 123 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGL 179
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
YL ++ I+HRD+K SN+LV+ +K+ DFG+S A S GT +M+PE
Sbjct: 180 TYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPER 236
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIP 577
L+ + +SD++S G+ L E+ P
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 14/212 (6%)
Query: 384 EEIGLGSYAVVYRGIWNGS-DVAVKVYFGSEYI--EGTLKNYQKEIDIIKKLRHPNVLLF 440
EE+G G++ VV+R + + V V + + Y + T+KN EI I+ +L HP ++
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN---EISIMNQLHHPKLINL 113
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIV 500
A + + ++ EFL G LF + + + G+ ++H + IV
Sbjct: 114 HDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS--IV 171
Query: 501 HRDLKSSNLLVD--KNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEK 558
H D+K N++ + K +VK+ DFGL++ N + K T ++ APE++ EP
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV-KVTTATAEFAAPEIVDREPVGFY 230
Query: 559 SDVFSFGVILWELVTASIPW---NNLNLMQVV 587
+D+++ GV+ + L++ P+ ++L +Q V
Sbjct: 231 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 262
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 384 EEIGLGSYAVVYRGIWN-GSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
E+IG G+Y VVY+ N G A+K + EG +EI I+K+L+H N++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ +++RL +V E L + L K L L+ L + G+ Y H R ++HR
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHR 124
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-SEPSNEKSDV 561
DLK NLL+++ +K+ DFGL+ T + AP+VL S+ + D+
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 562 FSFGVILWELVTASIPWNNLN----LMQVVGVVG 591
+S G I E+V + + ++ LM++ ++G
Sbjct: 185 WSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILG 218
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 384 EEIGLGSYAVVYRGIWN-GSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
E+IG G+Y VVY+ N G A+K + EG +EI I+K+L+H N++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ +++RL +V E L + L K L L+ L + G+ Y H R ++HR
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHR 124
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-SEPSNEKSDV 561
DLK NLL+++ +K+ DFGL+ T + AP+VL S+ + D+
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 562 FSFGVILWELVTASIPWNNLN----LMQVVGVVG 591
+S G I E+V + + ++ LM++ ++G
Sbjct: 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILG 218
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 109/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH--S 132
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 381 QLGEEIGLGSYAV--VYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL 438
+L ++IG G++ V + R + VAVK E I+ +N ++EI + LRHPN++
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID---ENVKREIINHRSLRHPNIV 78
Query: 439 LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
F + + L IV E+ G LF+ + + + + R + G++Y H
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCHAMQ-- 135
Query: 499 IVHRDLKSSNLLVDKNWT--VKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV-LRSEPS 555
+ HRDLK N L+D + +K+ FG S + + K GTP ++APEV L+ E
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSK-SSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 556 NEKSDVFSFGVILWELVTASIPWNN 580
+ +DV+S GV L+ ++ + P+ +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP+++APE++
Sbjct: 135 --IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 5/212 (2%)
Query: 367 TSCATDGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN-YQKE 425
T A G ++ +D + E+G G+ VV + S + + I+ ++N +E
Sbjct: 5 TQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRE 64
Query: 426 IDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDV 485
+ ++ + P ++ F GA S + I E + GSL + L K + + + ++++ V
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KEAKRIPEEILGKVSIAV 123
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM 545
RG+ YL ++ I+HRD+K SN+LV+ +K+ DFG+S A S GT +M
Sbjct: 124 LRGLAYLREKHQ-IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYM 180
Query: 546 APEVLRSEPSNEKSDVFSFGVILWELVTASIP 577
APE L+ + +SD++S G+ L EL P
Sbjct: 181 APERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E+ I++ +H NV+ + + L +V EFL G+L + + ++ ++ + L
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 178
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
V + ++ LH + ++HRD+KS ++L+ + VK+ DFG + + K GTP W
Sbjct: 179 VLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 236
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
MAPE++ P + D++S G+++ E+V P+ N
Sbjct: 237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 272
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 373 GGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN-YQKEIDIIKK 431
G ++ +D + E+G G+ VV++ S + + I+ ++N +E+ ++ +
Sbjct: 28 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 87
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL--RMALDVARGM 489
P ++ F GA S + I E + GSL + L K A I ++ ++++ V +G+
Sbjct: 88 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGL 144
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
YL ++ I+HRD+K SN+LV+ +K+ DFG+S A S GT +M+PE
Sbjct: 145 TYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPER 201
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIP 577
L+ + +SD++S G+ L E+ P
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 124
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 125 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 181
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 124
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 125 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 181
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHE 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 124
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 125 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-XGTLPYVAPELLKR 181
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 124
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 125 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 181
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 124
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 125 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 181
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 124
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 125 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 181
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-XGTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 107/205 (52%), Gaps = 18/205 (8%)
Query: 384 EEIGLGSYAVVYRGIWNGSDV--AVKVYFGSEYIEGTLKNYQKEIDIIKKL-RHPNVLLF 440
E IG+GSY+ R + +++ AVKV I+ + ++ +EI+I+ + +HPN++
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKV------IDKSKRDPSEEIEILLRYGQHPNIITL 86
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMAL-DVARGMNYLHHRNPPI 499
+ + +VTE + G L + + Q +R L + + + YLH + +
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILR--QKFFSEREASFVLHTIGKTVEYLHSQG--V 142
Query: 500 VHRDLKSSNLL-VDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS 555
VHRDLK SN+L VD++ +++ DFG + A + T ++APEVL+ +
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 556 NEKSDVFSFGVILWELVTASIPWNN 580
+E D++S G++L+ ++ P+ N
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E+ I++ +H NV+ + + L +V EFL G+L + + ++ ++ + L
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 128
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
V + ++ LH + ++HRD+KS ++L+ + VK+ DFG + + K GTP W
Sbjct: 129 VLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 186
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
MAPE++ P + D++S G+++ E+V P+ N
Sbjct: 187 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 222
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E+ I++ +H NV+ + + L +V EFL G+L + + ++ ++ + L
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 255
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
V + ++ LH + ++HRD+KS ++L+ + VK+ DFG + + K GTP W
Sbjct: 256 VLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 313
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
MAPE++ P + D++S G+++ E+V P+ N
Sbjct: 314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 349
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E+ I++ +H NV+ + + L +V EFL G+L + + ++ ++ + L
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 133
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
V + ++ LH + ++HRD+KS ++L+ + VK+ DFG + + K GTP W
Sbjct: 134 VLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
MAPE++ P + D++S G+++ E+V P+ N
Sbjct: 192 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 227
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 63
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 122
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 123 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 179
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS--LKNATYLTAKSGR 539
+ VARGM +L R +HRDL + N+L+ +N VK+ DFGL+ KN Y+ R
Sbjct: 205 SFQVARGMEFLSSRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTR 262
Query: 540 GTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+WMAPE + + + KSDV+S+GV+LWE+ +
Sbjct: 263 LPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E+ I++ +H NV+ + + L +V EFL G+L + + ++ ++ + L
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 135
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
V + ++ LH + ++HRD+KS ++L+ + VK+ DFG + + K GTP W
Sbjct: 136 VLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 193
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
MAPE++ P + D++S G+++ E+V P+ N
Sbjct: 194 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 229
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 124
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 125 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 181
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 26/229 (11%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH- 434
EDL+ EIG G+Y V + + +G +AVK S E K ++D++ +
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVK-RIRSTVDEKEQKQLLMDLDVVMRSSDC 80
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALD--IKRRL--RMALDVARGM 489
P ++ F GA+ + I E + + F +K Y LD I + ++ L + +
Sbjct: 81 PYIVQFYGALFREGDCWICMELM--STSFDKFYKYVYSVLDDVIPEEILGKITLATVKAL 138
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
N+L N I+HRD+K SN+L+D++ +K+ DFG+S + + G +MAPE
Sbjct: 139 NHLKE-NLKIIHRDIKPSNILLDRSGNIKLCDFGISG-QLVDSIAKTRDAGCRPYMAPE- 195
Query: 550 LRSEPS------NEKSDVFSFGVILWELVTASIP---WNNL--NLMQVV 587
R +PS + +SDV+S G+ L+EL T P WN++ L QVV
Sbjct: 196 -RIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV 243
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-XGTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALD 484
E+ I++ +H NV+ + + L +V EFL G+L + + ++ ++ + L
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 124
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
V + ++ LH + ++HRD+KS ++L+ + VK+ DFG + + K GTP W
Sbjct: 125 VLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 182
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
MAPE++ P + D++S G+++ E+V P+ N
Sbjct: 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 218
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 107/205 (52%), Gaps = 18/205 (8%)
Query: 384 EEIGLGSYAVVYRGIWNGSDV--AVKVYFGSEYIEGTLKNYQKEIDIIKKL-RHPNVLLF 440
E IG+GSY+ R + +++ AVKV I+ + ++ +EI+I+ + +HPN++
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKV------IDKSKRDPSEEIEILLRYGQHPNIITL 86
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMAL-DVARGMNYLHHRNPPI 499
+ + +VTE + G L + + Q +R L + + + YLH + +
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILR--QKFFSEREASFVLHTIGKTVEYLHSQG--V 142
Query: 500 VHRDLKSSNLL-VDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS 555
VHRDLK SN+L VD++ +++ DFG + A + T ++APEVL+ +
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 556 NEKSDVFSFGVILWELVTASIPWNN 580
+E D++S G++L+ ++ P+ N
Sbjct: 203 DEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 378 EDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
E+ Q E+IG G+Y VVY R G VA+K EG +EI ++K+L HP
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN-YQALDIKRRLRMALDVARGMNYLH- 493
N++ + + ++ +L +V E + + L K + + + + + +G+ + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-S 552
HR ++HRDLK NLL++ +K+ DFGL+ T T + APE+L
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 553 EPSNEKSDVFSFGVILWELVT 573
+ + D++S G I E+VT
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-XGTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 14/206 (6%)
Query: 383 GEEIGLGSYAVVYR------GIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
GEE+G G +AVV + G+ + K S + ++ ++E+ I+K+++HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ ++ + ++ E + G LF L + ++L + + G+ YLH +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH--S 132
Query: 497 PPIVHRDLKSSN-LLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
I H DLK N +L+D+N +K+ DFGL+ K K+ GTP ++APE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH-KIDFGNEFKNIFGTPAFVAPEIVNY 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
EP ++D++S GVI + L++ + P+
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-XGTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 38/230 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 22 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALM 79
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSL-------------FKT--- 465
E+ I+ + H NV+ +GA L ++ EF G+L +KT
Sbjct: 80 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPED 139
Query: 466 LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS 525
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL+
Sbjct: 140 LYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 526 S--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
K+ + R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 32/216 (14%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQ--------------KEID 427
+GEE+G G +A+V + + G EY +K Q +E+
Sbjct: 16 IGEELGSGQFAIVKKCREKST--------GLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I++++ H NV+ ++ + ++ E + G LF L + ++L + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILD 126
Query: 488 GMNYLHHRNPPIVHRDLKSSN-LLVDKNWTV---KVGDFGLS-SLKNATYLTAKSGRGTP 542
G+NYLH + I H DLK N +L+DKN + K+ DFGL+ +++ K+ GTP
Sbjct: 127 GVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTP 182
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+++APE++ EP ++D++S GVI + L++ + P+
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 39/231 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L+LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALM 69
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSL-------------FKT--- 465
E+ I+ + H NV+ +GA L ++TEF G+L +K
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 466 -LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL 524
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL
Sbjct: 130 DLYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGL 185
Query: 525 SS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ K+ + R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 186 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 13/206 (6%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLL 439
++ E+G G+ ++VYR G+ + + ++ K + EI ++ +L HPN++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIK 112
Query: 440 FMGAVASQERLGIVTEFLPRGSLFKTLHKN--YQALDIKRRLRMALDVARGMNYLHHRNP 497
+ + +V E + G LF + + Y D ++ L+ + YLH
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILE---AVAYLHENG- 168
Query: 498 PIVHRDLKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
IVHRDLK NLL + +K+ DFGLS + L K+ GTP + APE+LR
Sbjct: 169 -IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM-KTVCGTPGYCAPEILRGCA 226
Query: 555 SNEKSDVFSFGVILWELVTASIPWNN 580
+ D++S G+I + L+ P+ +
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYD 252
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFK------TLHK 468
I+ +++ E+ II +++ L G + + + + I+ E++ S+ K L K
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 469 NYQALDIKRRLRMAL-DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL 527
NY + ++ + V +Y+H+ I HRD+K SN+L+DKN VK+ DFG S
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNE-KNICHRDVKPSNILMDKNGRVKLSDFGESE- 200
Query: 528 KNATYLT---AKSGRGTPQWMAPEVLRSEPSNE--KSDVFSFGVILWELVTASIPW 578
Y+ K RGT ++M PE +E S K D++S G+ L+ + +P+
Sbjct: 201 ----YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 32/216 (14%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQ--------------KEID 427
+GEE+G G +A+V + + G EY +K Q +E+
Sbjct: 16 IGEELGSGQFAIVKKCREKST--------GLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I++++ H NV+ ++ + ++ E + G LF L + ++L + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILD 126
Query: 488 GMNYLHHRNPPIVHRDLKSSN-LLVDKNWTV---KVGDFGLS-SLKNATYLTAKSGRGTP 542
G+NYLH + I H DLK N +L+DKN + K+ DFGL+ +++ K+ GTP
Sbjct: 127 GVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTP 182
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+++APE++ EP ++D++S GVI + L++ + P+
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 32/216 (14%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQ--------------KEID 427
+GEE+G G +A+V + + G EY +K Q +E+
Sbjct: 16 IGEELGSGQFAIVKKCREKST--------GLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I++++ H NV+ ++ + ++ E + G LF L + ++L + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILD 126
Query: 488 GMNYLHHRNPPIVHRDLKSSN-LLVDKNWTV---KVGDFGLS-SLKNATYLTAKSGRGTP 542
G+NYLH + I H DLK N +L+DKN + K+ DFGL+ +++ K+ GTP
Sbjct: 127 GVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTP 182
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+++APE++ EP ++D++S GVI + L++ + P+
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 9/206 (4%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN-YQKEIDIIKKLR 433
++ +D + E+G G+ VV++ S + + I+ ++N +E+ ++ +
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 434 HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL--RMALDVARGMNY 491
P ++ F GA S + I E + GSL + L K A I ++ ++++ V +G+ Y
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTY 119
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR 551
L ++ I+HRD+K SN+LV+ +K+ DFG+S A S GT +M+PE L+
Sbjct: 120 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 176
Query: 552 SEPSNEKSDVFSFGVILWELVTASIP 577
+ +SD++S G+ L E+ P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 373 GGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN-YQKEIDIIKK 431
G ++ +D + E+G G+ VV++ S + + I+ ++N +E+ ++ +
Sbjct: 20 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 79
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL--RMALDVARGM 489
P ++ F GA S + I E + GSL + L K A I ++ ++++ V +G+
Sbjct: 80 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGL 136
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
YL ++ I+HRD+K SN+LV+ +K+ DFG+S A S GT +M+PE
Sbjct: 137 TYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPER 193
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIP 577
L+ + +SD++S G+ L E+ P
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 9/206 (4%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN-YQKEIDIIKKLR 433
++ +D + E+G G+ VV++ S + + I+ ++N +E+ ++ +
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 434 HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL--RMALDVARGMNY 491
P ++ F GA S + I E + GSL + L K A I ++ ++++ V +G+ Y
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTY 119
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR 551
L ++ I+HRD+K SN+LV+ +K+ DFG+S A S GT +M+PE L+
Sbjct: 120 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 176
Query: 552 SEPSNEKSDVFSFGVILWELVTASIP 577
+ +SD++S G+ L E+ P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 32/216 (14%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQ--------------KEID 427
+GEE+G G +A+V + + G EY +K Q +E+
Sbjct: 16 IGEELGSGQFAIVKKCREKST--------GLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I++++ H NV+ ++ + ++ E + G LF L + ++L + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILD 126
Query: 488 GMNYLHHRNPPIVHRDLKSSN-LLVDKNWTV---KVGDFGLS-SLKNATYLTAKSGRGTP 542
G+NYLH + I H DLK N +L+DKN + K+ DFGL+ +++ K+ GTP
Sbjct: 127 GVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTP 182
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+++APE++ EP ++D++S GVI + L++ + P+
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 9/206 (4%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN-YQKEIDIIKKLR 433
++ +D + E+G G+ VV++ S + + I+ ++N +E+ ++ +
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 434 HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL--RMALDVARGMNY 491
P ++ F GA S + I E + GSL + L K A I ++ ++++ V +G+ Y
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTY 119
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR 551
L ++ I+HRD+K SN+LV+ +K+ DFG+S A S GT +M+PE L+
Sbjct: 120 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 176
Query: 552 SEPSNEKSDVFSFGVILWELVTASIP 577
+ +SD++S G+ L E+ P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 9/206 (4%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN-YQKEIDIIKKLR 433
++ +D + E+G G+ VV++ S + + I+ ++N +E+ ++ +
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 434 HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL--RMALDVARGMNY 491
P ++ F GA S + I E + GSL + L K A I ++ ++++ V +G+ Y
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTY 119
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR 551
L ++ I+HRD+K SN+LV+ +K+ DFG+S A S GT +M+PE L+
Sbjct: 120 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 176
Query: 552 SEPSNEKSDVFSFGVILWELVTASIP 577
+ +SD++S G+ L E+ P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 9/206 (4%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN-YQKEIDIIKKLR 433
++ +D + E+G G+ VV++ S + + I+ ++N +E+ ++ +
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 434 HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL--RMALDVARGMNY 491
P ++ F GA S + I E + GSL + L K A I ++ ++++ V +G+ Y
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTY 119
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR 551
L ++ I+HRD+K SN+LV+ +K+ DFG+S A S GT +M+PE L+
Sbjct: 120 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQ 176
Query: 552 SEPSNEKSDVFSFGVILWELVTASIP 577
+ +SD++S G+ L E+ P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 32/216 (14%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQ--------------KEID 427
+GEE+G G +A+V + + G EY +K Q +E+
Sbjct: 16 IGEELGSGQFAIVKKCREKST--------GLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 428 IIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVAR 487
I++++ H NV+ ++ + ++ E + G LF L + ++L + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILD 126
Query: 488 GMNYLHHRNPPIVHRDLKSSN-LLVDKNWTV---KVGDFGLS-SLKNATYLTAKSGRGTP 542
G+NYLH + I H DLK N +L+DKN + K+ DFGL+ +++ K+ GTP
Sbjct: 127 GVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTP 182
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
+++APE++ EP ++D++S GVI + L++ + P+
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 111/218 (50%), Gaps = 9/218 (4%)
Query: 373 GGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKN-YQKEIDIIKK 431
G ++ +D + E+G G+ VV++ S + + I+ ++N +E+ ++ +
Sbjct: 4 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 63
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRL--RMALDVARGM 489
P ++ F GA S + I E + GSL + L K A I ++ ++++ V +G+
Sbjct: 64 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGL 120
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
YL ++ I+HRD+K SN+LV+ +K+ DFG+S A GT +M+PE
Sbjct: 121 TYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDEMANEFVGTRSYMSPER 177
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVV 587
L+ + +SD++S G+ L E+ P + + +++
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELL 215
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 12/161 (7%)
Query: 423 QKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKN--YQALDIKRRLR 480
+ EI ++KK++H N++ S +V + + G LF + + Y D ++
Sbjct: 54 ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ 113
Query: 481 MALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSSLKNATYLTAKS 537
L + YLH IVHRDLK NLL ++N + + DFGLS ++ ++ +
Sbjct: 114 QVLSAVK---YLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS--T 166
Query: 538 GRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP ++APEVL +P ++ D +S GVI + L+ P+
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 37/229 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L+LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH--RALM 80
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSLF---------------KTL 466
E+ I+ + H NV+ +GA L ++ EF G+L + L
Sbjct: 81 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDL 140
Query: 467 HKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL+
Sbjct: 141 YKDF--LTLEHLIXYSFQVAKGMEFLASRK--XIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 527 --LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
K+ + R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 197 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 39/231 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L+LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALM 78
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSL-------------FKT--- 465
E+ I+ + H NV+ +GA L ++ EF G+L +K
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 466 -LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL 524
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL
Sbjct: 139 DLYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGL 194
Query: 525 SS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ K+ + R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 195 ARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 39/231 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L+LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALM 78
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSL-------------FKT--- 465
E+ I+ + H NV+ +GA L ++ EF G+L +K
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 466 -LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL 524
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL
Sbjct: 139 DLYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGL 194
Query: 525 SS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ K+ + R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+Y V + ++ VAVK+ ++ +N +KEI I L H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINAMLNHE 65
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 124
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 125 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 181
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 101/193 (52%), Gaps = 7/193 (3%)
Query: 384 EEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
+++G G+YA VY+G +D VA+K E+ EG +E+ ++K L+H N++
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKE-IRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ +++ L +V E+L + L + L +++ + RG+ Y H + ++H
Sbjct: 67 DIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK--VLH 123
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-SEPSNEKSD 560
RDLK NLL+++ +K+ DFGL+ K+ T + T + P++L S + + D
Sbjct: 124 RDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQID 183
Query: 561 VFSFGVILWELVT 573
++ G I +E+ T
Sbjct: 184 MWGVGCIFYEMAT 196
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 17/188 (9%)
Query: 404 VAVKVYFGSEYIEGTLK------NYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFL 457
VA+K+ ++ G+ + N + EI+I+KKL HP ++ +++ IV E +
Sbjct: 44 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELM 102
Query: 458 PRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKN 514
G LF + N + + +L + + YLH I+HRDLK N+L+ +++
Sbjct: 103 EGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEED 159
Query: 515 WTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS---NEKSDVFSFGVILWEL 571
+K+ DFG S + T L ++ GTP ++APEVL S + N D +S GVIL+
Sbjct: 160 CLIKITDFGHSKILGETSLM-RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 218
Query: 572 VTASIPWN 579
++ P++
Sbjct: 219 LSGYPPFS 226
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 17/188 (9%)
Query: 404 VAVKVYFGSEYIEGTLK------NYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFL 457
VA+K+ ++ G+ + N + EI+I+KKL HP ++ +++ IV E +
Sbjct: 38 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELM 96
Query: 458 PRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKN 514
G LF + N + + +L + + YLH I+HRDLK N+L+ +++
Sbjct: 97 EGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEED 153
Query: 515 WTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS---NEKSDVFSFGVILWEL 571
+K+ DFG S + T L ++ GTP ++APEVL S + N D +S GVIL+
Sbjct: 154 CLIKITDFGHSKILGETSLM-RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 572 VTASIPWN 579
++ P++
Sbjct: 213 LSGYPPFS 220
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 477 RRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK 536
R + + G+ +LH RN I++RDLK N+L+D + V++ D GL+ A K
Sbjct: 290 RAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
Query: 537 SGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWN 579
GTP +MAPE+L E + D F+ GV L+E++ A P+
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 477 RRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK 536
R + + G+ +LH RN I++RDLK N+L+D + V++ D GL+ A K
Sbjct: 290 RAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
Query: 537 SGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWN 579
GTP +MAPE+L E + D F+ GV L+E++ A P+
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 39/231 (16%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNGSD-------VAVKVYF-GSEYIEGTLKNYQ 423
+WE L+LG+ +G G++ V G D VAVK+ G+ + E +
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALM 69
Query: 424 KEIDIIKKL-RHPNVLLFMGAVASQE-RLGIVTEFLPRGSL-------------FKT--- 465
E+ I+ + H NV+ +GA L ++ EF G+L +K
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 466 -LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL 524
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL
Sbjct: 130 DLYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGL 185
Query: 525 SS--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+ K+ + R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 186 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 477 RRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK 536
R + + G+ +LH RN I++RDLK N+L+D + V++ D GL+ A K
Sbjct: 290 RAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
Query: 537 SGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWN 579
GTP +MAPE+L E + D F+ GV L+E++ A P+
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 477 RRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK 536
R + + G+ +LH RN I++RDLK N+L+D + V++ D GL+ A K
Sbjct: 290 RAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
Query: 537 SGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWN 579
GTP +MAPE+L E + D F+ GV L+E++ A P+
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 29/216 (13%)
Query: 380 LQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK--LRHPNV 437
LQL E G + V++ VAVK++ + +++Q E +I ++H N+
Sbjct: 17 LQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDK-----QSWQSEREIFSTPGMKHENL 71
Query: 438 LLFMGAVAS----QERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
L F+ A + L ++T F +GSL L N + +A ++RG++YLH
Sbjct: 72 LQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI--ITWNELCHVAETMSRGLSYLH 129
Query: 494 H---------RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLTAKSGR-GTP 542
P I HRD KS N+L+ + T + DFGL+ + G+ GT
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR 189
Query: 543 QWMAPEVLRSEPSNEKS-----DVFSFGVILWELVT 573
++MAPEVL + ++ D+++ G++LWELV+
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 17/188 (9%)
Query: 404 VAVKVYFGSEYIEGTLK------NYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFL 457
VA+K+ ++ G+ + N + EI+I+KKL HP ++ +++ IV E +
Sbjct: 37 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELM 95
Query: 458 PRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKN 514
G LF + N + + +L + + YLH I+HRDLK N+L+ +++
Sbjct: 96 EGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEED 152
Query: 515 WTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS---NEKSDVFSFGVILWEL 571
+K+ DFG S + T L ++ GTP ++APEVL S + N D +S GVIL+
Sbjct: 153 CLIKITDFGHSKILGETSLM-RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 211
Query: 572 VTASIPWN 579
++ P++
Sbjct: 212 LSGYPPFS 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 17/188 (9%)
Query: 404 VAVKVYFGSEYIEGTLK------NYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFL 457
VA+K+ ++ G+ + N + EI+I+KKL HP ++ +++ IV E +
Sbjct: 38 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELM 96
Query: 458 PRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKN 514
G LF + N + + +L + + YLH I+HRDLK N+L+ +++
Sbjct: 97 EGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEED 153
Query: 515 WTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS---NEKSDVFSFGVILWEL 571
+K+ DFG S + T L ++ GTP ++APEVL S + N D +S GVIL+
Sbjct: 154 CLIKITDFGHSKILGETSLM-RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 572 VTASIPWN 579
++ P++
Sbjct: 213 LSGYPPFS 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 17/188 (9%)
Query: 404 VAVKVYFGSEYIEGTLK------NYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFL 457
VA+K+ ++ G+ + N + EI+I+KKL HP ++ +++ IV E +
Sbjct: 38 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELM 96
Query: 458 PRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKN 514
G LF + N + + +L + + YLH I+HRDLK N+L+ +++
Sbjct: 97 EGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEED 153
Query: 515 WTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS---NEKSDVFSFGVILWEL 571
+K+ DFG S + T L ++ GTP ++APEVL S + N D +S GVIL+
Sbjct: 154 CLIKITDFGHSKILGETSLM-RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 572 VTASIPWN 579
++ P++
Sbjct: 213 LSGYPPFS 220
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
ED L + +G G+ V + ++ VAVK+ ++ +N +KEI I K L H
Sbjct: 6 EDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHE 64
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
NV+ F G + E+ G LF + + + + R + G+ YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGI 123
Query: 496 NPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL---KNATYLTAKSGRGTPQWMAPEVL-R 551
I HRD+K NLL+D+ +K+ DFGL+++ N L K GT ++APE+L R
Sbjct: 124 G--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKR 180
Query: 552 SEPSNEKSDVFSFGVILWELVTASIPWN 579
E E DV+S G++L ++ +PW+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQK------EIDIIKKLRHPN 436
+IG GS +V R +G VAVK+ L+ Q+ E+ I++ +H N
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMM--------DLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRN 496
V+ + E L ++ EFL G+L + + L+ ++ + V + + YLH +
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQG 161
Query: 497 PPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSN 556
++HRD+KS ++L+ + VK+ DFG + + K GTP WMAPEV+
Sbjct: 162 --VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYA 219
Query: 557 EKSDVFSFGVILWELVTASIPW 578
+ D++S G+++ E+V P+
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPPY 241
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
IG GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ +KV DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
IG GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ +KV DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Query: 384 EEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E+IG G+Y V++ + VA+K + EG + +EI ++K+L+H N++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ S ++L +V EF + L K LD + + +G+ + H RN ++H
Sbjct: 68 DVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLH 124
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKS-D 560
RDLK NLL+++N +K+ DFGL+ + T + P+VL S D
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 561 VFSFGVILWELVTASIP 577
++S G I EL A+ P
Sbjct: 185 MWSAGCIFAELANAARP 201
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Query: 376 RWEDLQLGEEIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLR 433
++E+L L +G GSY +V R G VA+K + S+ + K +EI ++K+LR
Sbjct: 26 KYENLGL---VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 434 HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
H N++ + ++R +V EF+ ++ L LD + + + G+ + H
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCH 141
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSE 553
N I+HRD+K N+LV ++ VK+ DFG + A T + APE+L +
Sbjct: 142 SHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199
Query: 554 PSNEKS-DVFSFGVILWEL 571
K+ DV++ G ++ E+
Sbjct: 200 VKYGKAVDVWAIGCLVTEM 218
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNG---SD----VAVKVYFGSEYIEGTLKNYQK 424
+WE L G+ +G G++ V G SD VAVK+ S ++ +
Sbjct: 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-EALMS 75
Query: 425 EIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRR----- 478
E+ ++ L H N++ +GA ++TE+ G L L + + +
Sbjct: 76 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 135
Query: 479 ------------LRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS- 525
L + VA+GM +L +N +HRDL + N+L+ K+ DFGL+
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLAR 193
Query: 526 SLKN-ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+KN + Y+ + R +WMAPE + + +SDV+S+G+ LWEL +
Sbjct: 194 DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
IG GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ +KV DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNG---SD----VAVKVYFGSEYIEGTLKNYQK 424
+WE L G+ +G G++ V G SD VAVK+ S ++ +
Sbjct: 33 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-EALMS 91
Query: 425 EIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKR------ 477
E+ ++ L H N++ +GA ++TE+ G L L + + +
Sbjct: 92 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 151
Query: 478 -----------RLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS- 525
L + VA+GM +L +N +HRDL + N+L+ K+ DFGL+
Sbjct: 152 EDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLAR 209
Query: 526 SLKN-ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+KN + Y+ + R +WMAPE + + +SDV+S+G+ LWEL +
Sbjct: 210 DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 466 LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS 525
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL+
Sbjct: 190 LYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLA 245
Query: 526 S--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
K+ Y+ R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 246 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 466 LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS 525
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL+
Sbjct: 192 LYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLA 247
Query: 526 S--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
K+ Y+ R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 248 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 466 LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS 525
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL+
Sbjct: 185 LYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLA 240
Query: 526 S--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
K+ Y+ R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 241 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLR---HPNVLL 439
EIG+G+Y VY R +G VA+K EG + +E+ ++++L HPNV+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 440 FMGAVASQE-----RLGIVTEFLP---RGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
M A+ ++ +V E + R L K A IK +R L RG+++
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL---RGLDF 127
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVL 550
LH IVHRDLK N+LV TVK+ DFGL+ + +Y A + W APEVL
Sbjct: 128 LHANC--IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVTLWYRAPEVL 183
Query: 551 RSEPSNEKSDVFSFGVILWEL 571
D++S G I E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEM 204
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 466 LHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS 525
L+K++ L ++ + + VA+GM +L R +HRDL + N+L+ + VK+ DFGL+
Sbjct: 183 LYKDF--LTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLA 238
Query: 526 S--LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
K+ Y+ R +WMAPE + +SDV+SFGV+LWE+ +
Sbjct: 239 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNG---SD----VAVKVYFGSEYIEGTLKNYQK 424
+WE L G+ +G G++ V G SD VAVK+ S ++ +
Sbjct: 35 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-EALMS 93
Query: 425 EIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRR----- 478
E+ ++ L H N++ +GA ++TE+ G L L + + +
Sbjct: 94 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 153
Query: 479 ------------LRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS- 525
L + VA+GM +L +N +HRDL + N+L+ K+ DFGL+
Sbjct: 154 EDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLAR 211
Query: 526 SLKN-ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+KN + Y+ + R +WMAPE + + +SDV+S+G+ LWEL +
Sbjct: 212 DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNG---SD----VAVKVYFGSEYIEGTLKNYQK 424
+WE L G+ +G G++ V G SD VAVK+ S ++ +
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-EALMS 98
Query: 425 EIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRR----- 478
E+ ++ L H N++ +GA ++TE+ G L L + + +
Sbjct: 99 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 158
Query: 479 ------------LRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS- 525
L + VA+GM +L +N +HRDL + N+L+ K+ DFGL+
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLAR 216
Query: 526 SLKN-ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+KN + Y+ + R +WMAPE + + +SDV+S+G+ LWEL +
Sbjct: 217 DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 113/220 (51%), Gaps = 35/220 (15%)
Query: 374 GIRWEDLQLGEEIGLGSYAVVYRG---IWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
G+ +++++L IG G + V++ I + V +V + +E E +E+ +
Sbjct: 10 GMDFKEIEL---IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-------REVKALA 59
Query: 431 KLRHPNVLLFMG----------------AVASQERLGIVTEFLPRGSLFKTLHKNY-QAL 473
KL H N++ + G + + + L I EF +G+L + + K + L
Sbjct: 60 KLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL-SSLKNATY 532
D L + + +G++Y+H + +++RDLK SN+ + VK+GDFGL +SLKN
Sbjct: 120 DKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG- 176
Query: 533 LTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELV 572
+GT ++M+PE + S+ ++ D+++ G+IL EL+
Sbjct: 177 -KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 434 HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLH 493
HP + + +RL V EF+ G L + K+ + D R A ++ + +LH
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLH 141
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSE 553
+ I++RDLK N+L+D K+ DFG+ +T + GTP ++APE+L+
Sbjct: 142 DKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 554 PSNEKSDVFSFGVILWELVTASIPWNNLN 582
D ++ GV+L+E++ P+ N
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 376 RWE----DLQLGEEIGLGSYAVVYRGIWNG---SD----VAVKVYFGSEYIEGTLKNYQK 424
+WE L G+ +G G++ V G SD VAVK+ S ++ +
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-EALMS 98
Query: 425 EIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRR----- 478
E+ ++ L H N++ +GA ++TE+ G L L + + +
Sbjct: 99 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 158
Query: 479 ------------LRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS 526
L + VA+GM +L +N +HRDL + N+L+ K+ DFGL+
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLAR 216
Query: 527 -LKN-ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVT 573
+KN + Y+ + R +WMAPE + + +SDV+S+G+ LWEL +
Sbjct: 217 HIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Query: 448 ERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSS 507
+RL V E++ G L + + + + A +++ G+ +LH R I++RDLK
Sbjct: 93 DRLYFVMEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISIGLFFLHKRG--IIYRDLKLD 149
Query: 508 NLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVI 567
N+++D +K+ DFG+ +T + GTP ++APE++ +P + D +++GV+
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL 209
Query: 568 LWELVTASIPWN 579
L+E++ P++
Sbjct: 210 LYEMLAGQPPFD 221
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 6/125 (4%)
Query: 450 LGIVTEFLPRGSLFKTLHKNY-QALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSN 508
L I EF +G+L + + K + LD L + + +G++Y+H + ++HRDLK SN
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LIHRDLKPSN 166
Query: 509 LLVDKNWTVKVGDFGL-SSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVI 567
+ + VK+GDFGL +SLKN T +GT ++M+PE + S+ ++ D+++ G+I
Sbjct: 167 IFLVDTKQVKIGDFGLVTSLKNDGKRT--RSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 568 LWELV 572
L EL+
Sbjct: 225 LAELL 229
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLR---HPNVLL 439
EIG+G+Y VY R +G VA+K EG + +E+ ++++L HPNV+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 440 FMGAVASQE-----RLGIVTEFLP---RGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
M A+ ++ +V E + R L K A IK +R L RG+++
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL---RGLDF 127
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVL 550
LH IVHRDLK N+LV TVK+ DFGL+ + +Y A W APEVL
Sbjct: 128 LHANC--IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVVVTLWYRAPEVL 183
Query: 551 RSEPSNEKSDVFSFGVILWEL 571
D++S G I E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEM 204
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 17/188 (9%)
Query: 404 VAVKVYFGSEYIEGTLK------NYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFL 457
VA+++ ++ G+ + N + EI+I+KKL HP ++ +++ IV E +
Sbjct: 163 VAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELM 221
Query: 458 PRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKN 514
G LF + N + + +L + + YLH I+HRDLK N+L+ +++
Sbjct: 222 EGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEED 278
Query: 515 WTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS---NEKSDVFSFGVILWEL 571
+K+ DFG S + T L ++ GTP ++APEVL S + N D +S GVIL+
Sbjct: 279 CLIKITDFGHSKILGETSLM-RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337
Query: 572 VTASIPWN 579
++ P++
Sbjct: 338 LSGYPPFS 345
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
+IG GSY VV+ R G VA+K + SE K +EI ++K+L+HPN++ +
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ RL +V E+ ++ L + + + + + +N+ H N +HR
Sbjct: 70 VFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN--CIHR 126
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS-NEKSDV 561
D+K N+L+ K+ +K+ DFG + L T + +PE+L + DV
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDV 186
Query: 562 FSFGVILWELVTASIPW 578
++ G + EL++ W
Sbjct: 187 WAIGCVFAELLSGVPLW 203
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 25/239 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGS-------DVAVKVYFGSEYIEGTLKNYQKEIDIIK 430
+++ L +G G++ VY G +G VAVK Y E ++ E II
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-LPEVYSEQDELDFLMEALIIS 103
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALD 484
K H N++ +G I+ E + G L L + +L + L +A D
Sbjct: 104 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRG 540
+A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 164 IACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 541 TP-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 280
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 17/188 (9%)
Query: 404 VAVKVYFGSEYIEGTLK------NYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFL 457
VA+++ ++ G+ + N + EI+I+KKL HP ++ +++ IV E +
Sbjct: 177 VAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELM 235
Query: 458 PRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKN 514
G LF + N + + +L + + YLH I+HRDLK N+L+ +++
Sbjct: 236 EGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEED 292
Query: 515 WTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPS---NEKSDVFSFGVILWEL 571
+K+ DFG S + T L ++ GTP ++APEVL S + N D +S GVIL+
Sbjct: 293 CLIKITDFGHSKILGETSLM-RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 351
Query: 572 VTASIPWN 579
++ P++
Sbjct: 352 LSGYPPFS 359
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLR---HPNVLL 439
EIG+G+Y VY R +G VA+K EG + +E+ ++++L HPNV+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 440 FMGAVASQE-----RLGIVTEFLP---RGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
M A+ ++ +V E + R L K A IK +R L RG+++
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL---RGLDF 127
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVL 550
LH IVHRDLK N+LV TVK+ DFGL+ + +Y A W APEVL
Sbjct: 128 LHANC--IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVVVTLWYRAPEVL 183
Query: 551 RSEPSNEKSDVFSFGVILWEL 571
D++S G I E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEM 204
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 383 GEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH-------- 434
+E+G G +AVV + I + G EY LK ++ D ++ H
Sbjct: 34 SKELGRGKFAVVRQCISKST--------GQEYAAKFLKKRRRGQDCRAEILHEIAVLELA 85
Query: 435 ---PNVLLFMGAVASQERLGIVTEFLPRGSLFK-TLHKNYQALDIKRRLRMALDVARGMN 490
P V+ + + ++ E+ G +F L + + + +R+ + G+
Sbjct: 86 KSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVY 145
Query: 491 YLHHRNPPIVHRDLKSSNLLVDKNW---TVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
YLH N IVH DLK N+L+ + +K+ DFG+S K + GTP+++AP
Sbjct: 146 YLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSR-KIGHACELREIMGTPEYLAP 202
Query: 548 EVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
E+L +P +D+++ G+I + L+T + P+
Sbjct: 203 EILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 384 EEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
E+IG G+Y V++ + VA+K + EG + +EI ++K+L+H N++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 442 GAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVH 501
+ S ++L +V EF + L K LD + + +G+ + H RN ++H
Sbjct: 68 DVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLH 124
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKS-D 560
RDLK NLL+++N +K+ +FGL+ + T + P+VL S D
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 561 VFSFGVILWELVTASIP 577
++S G I EL A P
Sbjct: 185 MWSAGCIFAELANAGRP 201
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ ++V DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 24/181 (13%)
Query: 419 LKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLF----------KTLHK 468
++ + EI+++K L HPN++ + IV E G L K L +
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 469 NYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDK---NWTVKVGDFGLS 525
Y A +K+ + + Y H ++ +VH+DLK N+L + +K+ DFGL+
Sbjct: 124 GYVAELMKQMM-------NALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Query: 526 SLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNLNLMQ 585
L + + + GT +MAPEV + + + K D++S GV+++ L+T +P+ +L +
Sbjct: 175 ELFKSDEHSTNAA-GTALYMAPEVFKRDVTF-KCDIWSAGVVMYFLLTGCLPFTGTSLEE 232
Query: 586 V 586
V
Sbjct: 233 V 233
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E+ P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NL++D+ +KV DFGL+ +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD--LIYR 166
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ ++V DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 222
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ ++V DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
L H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 165 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 280
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
L H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 91 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 151 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 266
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
P + + +RL V E++ G L + + + A ++A G+ +L
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQS 460
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEP 554
+ I++RDLK N+++D +K+ DFG+ +T K GTP ++APE++ +P
Sbjct: 461 KG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 555 SNEKSDVFSFGVILWELVTASIPW 578
+ D ++FGV+L+E++ P+
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 433 RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
+ P + + +RL V E++ G L + + + + + A ++A G+ +L
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE-PHAVFYAAEIAIGLFFL 137
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
+ I++RDLK N+++D +K+ DFG+ +T K GTP ++APE++
Sbjct: 138 QSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY 195
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
+P + D ++FGV+L+E++ P+
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E+ P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NL++D+ +KV DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 166
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ ++V DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----GTPEYLAPEIILSKGYNKAVDW 222
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ ++V DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ ++V DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++P G +F L + + +
Sbjct: 78 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 133
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 134 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 190
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 191 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 166
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ ++V DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 222
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 376 RWEDLQLGEEIGLGSYAVVYRGIWNGSDVAV---KVYFG--SEYIEGTLKNYQKEIDIIK 430
R+E L +G G +A VY+ ++ V K+ G SE +G + +EI +++
Sbjct: 11 RYEKLDF---LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 67
Query: 431 KLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD---IKRRLRMALDVAR 487
+L HPN++ + A + + +V +F+ L + N L IK + M L +
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTL---Q 123
Query: 488 GMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAP 547
G+ YLH I+HRDLK +NLL+D+N +K+ DFGL+ + T + AP
Sbjct: 124 GLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAP 181
Query: 548 EVLR-SEPSNEKSDVFSFGVILWELV 572
E+L + D+++ G IL EL+
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ ++V DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++P G +F L + + +
Sbjct: 106 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 161
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 162 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 218
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 219 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++P G +F L + + + R A + YLH + +++R
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIVLTFEYLHSLD--LIYR 151
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ ++V DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 152 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----GTPEYLAPEIILSKGYNKAVDW 207
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 208 WALGVLIYEMAAGYPPF 224
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 9/162 (5%)
Query: 422 YQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM 481
+ +E DI+ P V+ A + L +V E++P G L L NY + +
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFYT 180
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLT-AKSGRG 540
A +V ++ +H ++HRD+K N+L+DK+ +K+ DFG + T + + G
Sbjct: 181 A-EVVLALDAIHSMG--LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVG 237
Query: 541 TPQWMAPEVLRSEPSN----EKSDVFSFGVILWELVTASIPW 578
TP +++PEVL+S+ + + D +S GV L+E++ P+
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++P G +F L + + +
Sbjct: 86 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 142 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 198
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 199 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++P G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++P G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E+ P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NL++D+ +KV DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++P G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++P G +F L + + +
Sbjct: 86 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 142 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 198
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 199 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++P G +F L + + +
Sbjct: 86 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 142 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 198
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 199 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E+ P G +F L + + + R A + YLH + +++R
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD--LIYR 166
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NL++D+ +KV DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 222
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E+ P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NL++D+ ++V DFGL+ +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 378 EDLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
++ ++ E IG G+Y VV R G VA+K + + K +E+ I+K +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 436 NVLLFMGAVASQERLG------IVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGM 489
N++ + G +V + + L + +H + Q L ++ + RG+
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSS-QPLTLEHVRYFLYQLLRGL 172
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL------SSLKNATYLTAKSGRGTPQ 543
Y+H ++HRDLK SNLLV++N +K+GDFG+ S ++ ++T T
Sbjct: 173 KYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV--ATRW 228
Query: 544 WMAPEVLRS-EPSNEKSDVFSFGVILWELVT 573
+ APE++ S + D++S G I E++
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++P G +F L + + +
Sbjct: 78 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 133
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 134 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 190
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 191 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
L IG GS+ V + G+ + +Y + +++EI+I+K L HPN++
Sbjct: 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 442 GAVASQERLGIVTEFLPRGSLF-KTLHKN-YQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+ +V E G LF + +HK ++ D R ++ DV + Y H N +
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK---DVLSAVAYCHKLN--V 127
Query: 500 VHRDLKSSNLLV---DKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPS 555
HRDLK N L + +K+ DFGL++ K + K GTP +++P+VL
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVLEGLYG 185
Query: 556 NEKSDVFSFGVILWELVTASIPWN 579
E D +S GV+++ L+ P++
Sbjct: 186 PE-CDEWSAGVMMYVLLCGYPPFS 208
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 382 LGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM 441
L IG GS+ V + G+ + +Y + +++EI+I+K L HPN++
Sbjct: 30 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 89
Query: 442 GAVASQERLGIVTEFLPRGSLF-KTLHKN-YQALDIKRRLRMALDVARGMNYLHHRNPPI 499
+ +V E G LF + +HK ++ D R ++ DV + Y H N +
Sbjct: 90 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK---DVLSAVAYCHKLN--V 144
Query: 500 VHRDLKSSNLLV---DKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPS 555
HRDLK N L + +K+ DFGL++ K + K GTP +++P+VL
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVLEGLYG 202
Query: 556 NEKSDVFSFGVILWELVTASIPWN 579
E D +S GV+++ L+ P++
Sbjct: 203 PE-CDEWSAGVMMYVLLCGYPPFS 225
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 165 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 280
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 150 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 265
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E+ P G +F L + + +
Sbjct: 86 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NL++D+ +KV DFG + +K T+
Sbjct: 142 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX 198
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 199 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSS-LKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 151 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML 208
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 266
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 82 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 142 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 199
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 200 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 257
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 151 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 266
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSE---YIEGTLKNYQKEI 426
D G R+ LQ IG G+Y +V + VA+K E Y + TL+ EI
Sbjct: 40 DVGPRYTQLQY---IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR----EI 92
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH NV+ + + R + + L L+K L Q L
Sbjct: 93 QILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS--QQLSNDHICYFL 150
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 151 YQILRGLKYIHSAN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 209 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 150 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 265
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 20 DVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 72
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 73 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 130
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 131 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 189 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 22 DVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 74
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 75 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 132
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 133 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 191 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 117 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 176
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 177 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 234
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 292
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 167 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 224
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 225 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 282
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 111/224 (49%), Gaps = 30/224 (13%)
Query: 375 IRWEDLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQK-----EID 427
++ +DL+ E+G G+Y VV R + +G +AVK I T+ + ++ ++D
Sbjct: 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVK------RIRATVNSQEQKRLLMDLD 101
Query: 428 I-IKKLRHPNVLLFMGAVASQERLGIVTEFLPRG--SLFKTLHKNYQALDIKRRLRMALD 484
I ++ + P + F GA+ + + I E + +K + Q + ++A+
Sbjct: 102 ISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVS 161
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR----G 540
+ + + +LH + ++HRD+K SN+L++ VK+ DFG+S YL + G
Sbjct: 162 IVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISG-----YLVDSVAKTIDAG 215
Query: 541 TPQWMAPEVLRSEPSNE----KSDVFSFGVILWELVTASIPWNN 580
+MAPE + E + + KSD++S G+ + EL P+++
Sbjct: 216 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 259
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 40 DVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 92
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 93 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 150
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 151 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 209 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 28 DVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 80
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 81 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 138
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 139 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 197 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 20 DVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 72
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 73 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 130
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 131 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 189 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E+ P G +F L + + + R A + YLH + +++R
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 166
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NL++D+ +KV DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 222
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 422 YQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM 481
+ +E DI+ P V+ A L +V E++P G L L NY + R
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYT 179
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-YLTAKSGRG 540
A +V ++ +H +HRD+K N+L+DK+ +K+ DFG N + + G
Sbjct: 180 A-EVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 541 TPQWMAPEVLRSEPSN----EKSDVFSFGVILWELVTASIPW 578
TP +++PEVL+S+ + + D +S GV L+E++ P+
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 422 YQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM 481
+ +E DI+ P V+ A L +V E++P G L L NY + R
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYT 179
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-YLTAKSGRG 540
A +V ++ +H +HRD+K N+L+DK+ +K+ DFG N + + G
Sbjct: 180 A-EVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 541 TPQWMAPEVLRSEPSN----EKSDVFSFGVILWELVTASIPW 578
TP +++PEVL+S+ + + D +S GV L+E++ P+
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 24 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR----EI 76
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 134
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 193 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 106 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 161
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K AT+
Sbjct: 162 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT 218
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 219 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 422 YQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM 481
+ +E DI+ P V+ A L +V E++P G L L NY + R
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYT 174
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-YLTAKSGRG 540
A +V ++ +H +HRD+K N+L+DK+ +K+ DFG N + + G
Sbjct: 175 A-EVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 231
Query: 541 TPQWMAPEVLRSEPSN----EKSDVFSFGVILWELVTASIPW 578
TP +++PEVL+S+ + + D +S GV L+E++ P+
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 97 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 156
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A+Y
Sbjct: 157 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 214
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 272
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E+ P G +F L + + + R A + YLH + +++R
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 166
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NL++D+ +KV DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 222
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 18 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 70
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 71 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 128
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 129 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 187 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 24 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 76
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KCQHLSNDHICYFL 134
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 193 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 25 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 77
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 78 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 135
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 136 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 194 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 26 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 78
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 79 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 136
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 137 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 195 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 17 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 69
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 70 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 127
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 128 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 186 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 24 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 76
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 134
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 193 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 18 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 70
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 71 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 128
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 129 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 187 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I + + P ++ + L +V E+ P G +F L + + +
Sbjct: 86 IEHTLN----EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSE 141
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ +KV DFG + +K T+
Sbjct: 142 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX 198
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 199 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 378 EDLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHP 435
++ ++ E IG G+Y VV R G VA+K + + K +E+ I+K +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 436 NVLLFMGAVASQERLG------IVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGM 489
N++ + G +V + + L + +H + Q L ++ + RG+
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSS-QPLTLEHVRYFLYQLLRGL 171
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL------SSLKNATYLTAKSGRGTPQ 543
Y+H ++HRDLK SNLLV++N +K+GDFG+ S ++ ++T T
Sbjct: 172 KYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV--ATRW 227
Query: 544 WMAPEVLRS-EPSNEKSDVFSFGVILWELVT 573
+ APE++ S + D++S G I E++
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E+ P G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NL++D+ ++V DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 20 DVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 72
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 73 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 130
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 131 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 189 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 377 WEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQK---EIDIIKKLR 433
WE + E +G G + V R W D +V E + KN ++ EI I+KKL
Sbjct: 17 WE---MKERLGTGGFGYVLR--WIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 434 HPNVLLFMGAVASQERLG------IVTEFLPRGSLFKTLHKNYQALDIKR-RLRMAL-DV 485
HPNV+ ++L + E+ G L K L++ +K +R L D+
Sbjct: 72 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 131
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTP 542
+ + YLH I+HRDLK N+++ + K+ D G + + L + GT
Sbjct: 132 SSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV-GTL 188
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
Q++APE+L + D +SFG + +E +T P+
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 377 WEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQK---EIDIIKKLR 433
WE + E +G G + V R W D +V E + KN ++ EI I+KKL
Sbjct: 16 WE---MKERLGTGGFGYVLR--WIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 434 HPNVLLFMGAVASQERLG------IVTEFLPRGSLFKTLHKNYQALDIKR-RLRMAL-DV 485
HPNV+ ++L + E+ G L K L++ +K +R L D+
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSSLKNATYLTAKSGRGTP 542
+ + YLH I+HRDLK N+++ + K+ D G + + L + GT
Sbjct: 131 SSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV-GTL 187
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
Q++APE+L + D +SFG + +E +T P+
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 24 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 76
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 134
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 193 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A Y
Sbjct: 168 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 225
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 226 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 283
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 120/230 (52%), Gaps = 24/230 (10%)
Query: 365 NETSCATDGGIRWEDLQLGEEIGLGSYAVVY-----RGIWNGSDVAVKVYFGSEYIEG-- 417
N T A GI E+ +L + +G G+Y V+ G G A+KV + ++
Sbjct: 43 NLTGHAEKVGI--ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAK 100
Query: 418 TLKNYQKEIDIIKKLRH-PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIK 476
T ++ + E +++ +R P ++ A ++ +L ++ +++ G LF L + + + +
Sbjct: 101 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE 160
Query: 477 RRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK 536
++ + ++ + +LH I++RD+K N+L+D N V + DFGLS ++ +
Sbjct: 161 VQIYVG-EIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSK----EFVADE 213
Query: 537 SGR-----GTPQWMAPEVLRSEPS--NEKSDVFSFGVILWELVTASIPWN 579
+ R GT ++MAP+++R S ++ D +S GV+++EL+T + P+
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 20 DVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 72
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 73 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 130
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 131 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 189 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
A GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LA----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNG-----SDVAVKVYFGSEYI-EGTLKNYQKEIDIIKK 431
+++ L +G G++ VY G +G S + V V E E ++ E II K
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY------QALDIKRRLRMALDV 485
H N++ +G I+ E + G L L + +L + L +A D+
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 486 ARGMNYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLS-SLKNATYLTAKSGRGT 541
A G YL + +HRD+ + N L+ K+GDFG++ + A Y
Sbjct: 191 ACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 248
Query: 542 P-QWMAPEVLRSEPSNEKSDVFSFGVILWELVT-ASIPW---NNLNLMQVVGVVGFMD 594
P +WM PE K+D +SFGV+LWE+ + +P+ +N +++ V G MD
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 306
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 24 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 76
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 134
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTA---KSGR 539
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 540 GTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 25 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 77
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 78 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 135
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTA---KSGR 539
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +
Sbjct: 136 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 540 GTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 22 DVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 74
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ RH N++ + Q + + + L L+K L Q L
Sbjct: 75 KILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 132
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 133 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 191 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 111/224 (49%), Gaps = 30/224 (13%)
Query: 375 IRWEDLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQK-----EID 427
++ +DL+ E+G G+Y VV R + +G +AVK I T+ + ++ ++D
Sbjct: 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVK------RIRATVNSQEQKRLLMDLD 57
Query: 428 I-IKKLRHPNVLLFMGAVASQERLGIVTEFLPRG--SLFKTLHKNYQALDIKRRLRMALD 484
I ++ + P + F GA+ + + I E + +K + Q + ++A+
Sbjct: 58 ISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVS 117
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR----G 540
+ + + +LH + ++HRD+K SN+L++ VK+ DFG+S YL + G
Sbjct: 118 IVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISG-----YLVDDVAKDIDAG 171
Query: 541 TPQWMAPEVLRSEPSNE----KSDVFSFGVILWELVTASIPWNN 580
+MAPE + E + + KSD++S G+ + EL P+++
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 20 DVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 72
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 73 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 130
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 131 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 189 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 24 DVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR----EI 76
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + + L L+K L Q L
Sbjct: 77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 134
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 135 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 193 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 377 WEDLQLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRH 434
+ DLQ +G G+Y V + G+ VA+K + E K +E+ ++K +RH
Sbjct: 27 YRDLQ---PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH 83
Query: 435 PNVLLFMGAVASQERLGIVTEF---LP-RGSLFKTLHKNYQALDIKRRLRMALDVARGMN 490
NV+ + E L T+F +P G+ L K ++ L R + + +G+
Sbjct: 84 ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK-HEKLGEDRIQFLVYQMLKGLR 142
Query: 491 YLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEV 549
Y+H I+HRDLK NL V+++ +K+ DFGL+ ++ G +W APEV
Sbjct: 143 YIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQADSEM----XGXVVTRWYRAPEV 196
Query: 550 -LRSEPSNEKSDVFSFGVILWELVT 573
L + D++S G I+ E++T
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMIT 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 22/231 (9%)
Query: 365 NETSCATDGGIRWE----DLQLGEEIGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGT 418
+T T GG R++ DL+ E+G G+ V++ + G +AVK S E
Sbjct: 8 KQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN 67
Query: 419 LKNYQKEIDIIKKLRH-PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKR 477
K ++D++ K P ++ G + + I E + G+ + L K Q +R
Sbjct: 68 -KRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPER 124
Query: 478 RL-RMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK 536
L +M + + + + YL ++ ++HRD+K SN+L+D+ +K+ DFG+S +
Sbjct: 125 ILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDR 183
Query: 537 SGRGTPQWMAPEVLRSEPSNE-------KSDVFSFGVILWELVTASIPWNN 580
S G +MAPE R +P + ++DV+S G+ L EL T P+ N
Sbjct: 184 SA-GCAAYMAPE--RIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 106 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 161
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 162 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 218
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 219 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 40 DVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 92
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ + RH N++ + Q + + L L+K L Q L
Sbjct: 93 KILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT--QHLSNDHICYFL 150
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN-----ATYLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 151 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 209 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKV-----YFGSEYIEGTLKNYQKEI 426
D G R+ +L IG G+Y +V N + V V + + Y + TL+ EI
Sbjct: 22 DVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 74
Query: 427 DIIKKLRHPNVL----LFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
I+ RH N++ + Q + + + L L+K L Q L
Sbjct: 75 KILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFL 132
Query: 483 LDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNAT-----YLTAKS 537
+ RG+ Y+H N ++HRDLK SNLL++ +K+ DFGL+ + + +LT
Sbjct: 133 YQILRGLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 538 GRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVT 573
T + APE++ + KS D++S G IL E+++
Sbjct: 191 --ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 80 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 135
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 136 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 192
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 193 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 23/150 (15%)
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHK---NYQALDIKRRLRMALDVARGMNYLHHRNP 497
M AV + L I E+ G+L+ +H N Q + R R L+ ++Y+H +
Sbjct: 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE---ALSYIHSQG- 136
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK--------------SGRGTPQ 543
I+HRDLK N+ +D++ VK+GDFGL+ + + K S GT
Sbjct: 137 -IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAM 195
Query: 544 WMAPEVLR-SEPSNEKSDVFSFGVILWELV 572
++A EVL + NEK D++S G+I +E++
Sbjct: 196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Query: 421 NYQKEIDIIKKLRHPNVLLFMGAVASQE--RLGIVTEFLPRG---SLFKTLHKNYQALDI 475
N +KEI ++++LRH NV+ + + ++E ++ +V E+ G L K +
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQA 111
Query: 476 KRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--ATYL 533
+D G+ YLH + IVH+D+K NLL+ T+K+ G++ + A
Sbjct: 112 HGYFCQLID---GLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD 166
Query: 534 TAKSGRGTPQWMAPEVLRS--EPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVG 591
T ++ +G+P + PE+ S K D++S GV L+ + T P+ N+ ++ +G
Sbjct: 167 TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIG 226
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 386 IGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRHPNVLLFMG 442
+G GS+ ++ + + G+ A+K+ + ++ +++ E I++ + P ++
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHR 502
+ L +V E++ G +F L + + + R A + YLH + +++R
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD--LIYR 165
Query: 503 DLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDV 561
DLK NLL+D+ ++V DFG + +K T+ GTP+++APE++ S+ N+ D
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----GTPEYLAPEIILSKGYNKAVDW 221
Query: 562 FSFGVILWELVTASIPW 578
++ GV+++E+ P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVA---VKVYFGSEYIEGTLKNYQKEIDIIKKLR---HPN 436
EIG+G+Y VY R +G VA V+V G G + +E+ ++++L HPN
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 437 VLLFMGAVASQE-----RLGIVTEFLP---RGSLFKTLHKNYQALDIKRRLRMALDVARG 488
V+ M A+ ++ +V E + R L K A IK +R L RG
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL---RG 132
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-AP 547
+++LH IVHRDLK N+LV TVK+ DFGL+ + +Y A + W AP
Sbjct: 133 LDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTPVVVTLWYRAP 188
Query: 548 EVLRSEPSNEKSDVFSFGVILWEL 571
EVL D++S G I E+
Sbjct: 189 EVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKK 431
+ ++ ++ IG GS+ V N + A+K + +E ++N KE+ I++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L HP ++ + +E + +V + L G L L +N + +L + ++ ++Y
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC-ELVMALDY 130
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYLTAKSGRGTPQWMAPEVL 550
L +N I+HRD+K N+L+D++ V + DF +++ L T +T + GT +MAPE+
Sbjct: 131 L--QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA--GTKPYMAPEMF 186
Query: 551 RSEPSNEKS---DVFSFGVILWELVTASIPWN 579
S S D +S GV +EL+ P++
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 86 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 141
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 142 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 198
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 199 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LX----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGI---------WNGSDVAVKVYFGSEYIEGTLKNYQKE 425
IR EDL E +G G++ +++G+ + ++V +KV ++ +NY +
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKV------LDKAHRNYSES 58
Query: 426 I----DIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM 481
++ KL H +++L G + +V EF+ GSL L KN ++I +L +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV 118
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN----ATYLTAKS 537
A +A M++L ++H ++ + N+L+ + K G+ L + T L
Sbjct: 119 AKQLAAAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 538 GRGTPQWMAPEVLRSEPS-NEKSDVFSFGVILWELVT 573
+ W+ PE + + + N +D +SFG LWE+ +
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 72 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 127
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 128 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWX 184
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 185 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 401 GSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLG------IVT 454
G +VAVK + K +E+ ++K + H N++ + Q+ L +V
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 455 EFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN 514
E + +L + +H LD +R + + G+ +LH I+HRDLK SN++V +
Sbjct: 107 ELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD 160
Query: 515 WTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTA 574
T+K+ DFGL+ + ++ T + APEV+ E D++S G I+ ELV
Sbjct: 161 CTLKILDFGLARTASTNFMMTPYV-VTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
Query: 575 SI 576
S+
Sbjct: 220 SV 221
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NL++D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APE++ S+ N+ D ++ GV+++++ P+
Sbjct: 198 LC----GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 450 LGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSN 508
L I+ E + G LF + + QA + + D+ + +LH N I HRD+K N
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPEN 158
Query: 509 LLV---DKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFG 565
LL +K+ +K+ DFG + K T ++ TP ++APEVL E ++ D++S G
Sbjct: 159 LLYTSKEKDAVLKLTDFGFA--KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 216
Query: 566 VILWELVTASIPWNNLNLMQVVGVVGFMDRRLEL 599
VI++ L+ P+ + N Q + M RR+ L
Sbjct: 217 VIMYILLCGFPPFYS-NTGQAIS--PGMKRRIRL 247
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ + T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-EPEVVTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHKI 223
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S GVI+ E++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGV 223
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 7/159 (4%)
Query: 423 QKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLF-KTLHKNYQALDIKRRLRM 481
+ EI ++ +L H N++ A S+ + +V E++ G LF + + ++Y ++ L M
Sbjct: 134 KNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM 193
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLL-VDKNWT-VKVGDFGLSSLKNATYLTAKSGR 539
+ G+ ++H I+H DLK N+L V+++ +K+ DFGL+ + K
Sbjct: 194 K-QICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLAR-RYKPREKLKVNF 249
Query: 540 GTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++APEV+ + + +D++S GVI + L++ P+
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 450 LGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSN 508
L I+ E + G LF + + QA + + D+ + +LH N I HRD+K N
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPEN 139
Query: 509 LLV---DKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFG 565
LL +K+ +K+ DFG + K T ++ TP ++APEVL E ++ D++S G
Sbjct: 140 LLYTSKEKDAVLKLTDFGFA--KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 197
Query: 566 VILWELVTASIPWNNLNLMQVVGVVGFMDRRLEL 599
VI++ L+ P+ + N Q + M RR+ L
Sbjct: 198 VIMYILLCGFPPFYS-NTGQAIS--PGMKRRIRL 228
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S GVI+ E++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGV 223
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 120/227 (52%), Gaps = 33/227 (14%)
Query: 376 RWEDL-QLGEEI-GLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKN-YQKEIDIIK 430
R+ED+ QL E++ G G++A V I + AVK+ E G +++ +E++++
Sbjct: 9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKII---EKQPGHIRSRVFREVEMLY 65
Query: 431 KLR-HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGM 489
+ + H NVL + ++R +V E + GS+ +HK +++ + + DVA +
Sbjct: 66 QCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASAL 124
Query: 490 NYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSS----------LKNATYLTAK 536
++LH++ I HRDLK N+L + + VK+ DFGL S + LT
Sbjct: 125 DFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC 182
Query: 537 SGRGTPQWMAPEVLRS---EPS--NEKSDVFSFGVILWELVTASIPW 578
G+ ++MAPEV+ + E S +++ D++S GVIL+ L++ P+
Sbjct: 183 ---GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSL-FKTLHKNYQALDIKRRLRMAL 483
E I++K+ V+ A +++ L +V + G L F H R + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 484 DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQ 543
++ G+ LH IV+RDLK N+L+D + +++ D GL+ + T K GT
Sbjct: 294 EICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVG 350
Query: 544 WMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
+MAPEV+++E D ++ G +L+E++ P+
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+ +APE++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYRGI---------WNGSDVAVKVYFGSEYIEGTLKNYQKE 425
IR EDL E +G G++ +++G+ + ++V +KV ++ +NY +
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKV------LDKAHRNYSES 58
Query: 426 I----DIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRM 481
++ KL H +++L G + +V EF+ GSL L KN ++I +L +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV 118
Query: 482 ALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN----ATYLTAKS 537
A +A M++L ++H ++ + N+L+ + K G+ L + T L
Sbjct: 119 AKQLAWAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 538 GRGTPQWMAPEVLRSEPS-NEKSDVFSFGVILWELVT 573
+ W+ PE + + + N +D +SFG LWE+ +
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ + T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-EPEVVTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 223
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 415 IEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALD 474
IE TL E I++ + P ++ + L +V E++ G +F L + + +
Sbjct: 85 IEHTLN----EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
Query: 475 IKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSS-LKNATYL 533
R A + YLH + +++RDLK NLL+D+ ++V DFG + +K T+
Sbjct: 141 PHARF-YAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX 197
Query: 534 TAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPW 578
GTP+++AP ++ S+ N+ D ++ GV+++E+ P+
Sbjct: 198 LC----GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 68 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER-MSYLL 126
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 185
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 79 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER-MSYLL 137
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 138 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 196
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 228
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 425 EIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSL-FKTLHKNYQALDIKRRLRMAL 483
E I++K+ V+ A +++ L +V + G L F H R + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 484 DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQ 543
++ G+ LH IV+RDLK N+L+D + +++ D GL+ + T K GT
Sbjct: 294 EICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVG 350
Query: 544 WMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
+MAPEV+++E D ++ G +L+E++ P+
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 75 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER-MSYLL 133
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRYY 192
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E++ +
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 224
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 76 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER-MSYLL 134
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 135 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMV-PFVVTRYY 193
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E++ +
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 225
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 377 WEDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNY-QKEIDIIKKLRHP 435
+E + E++G G + +V+R + S F ++GT + +KEI I+ RH
Sbjct: 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK--VKGTDQVLVKKEISILNIARHR 61
Query: 436 NVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHR 495
N+L + S E L ++ EF+ +F+ ++ + L+ + + V + +LH
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 496 NPPIVHRDLKSSNLLVD--KNWTVKVGDFGLS-SLK---NATYLTAKSGRGTPQWMAPEV 549
N I H D++ N++ ++ T+K+ +FG + LK N L P++ APEV
Sbjct: 122 N--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT-----APEYYAPEV 174
Query: 550 LRSEPSNEKSDVFSFGVILWELVTASIPW 578
+ + + +D++S G +++ L++ P+
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPF 203
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 23/150 (15%)
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHK---NYQALDIKRRLRMALDVARGMNYLHHRNP 497
M AV + L I E+ +L+ +H N Q + R R L+ ++Y+H +
Sbjct: 81 MTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE---ALSYIHSQG- 136
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAK--------------SGRGTPQ 543
I+HRDLK N+ +D++ VK+GDFGL+ + + K S GT
Sbjct: 137 -IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAM 195
Query: 544 WMAPEVLR-SEPSNEKSDVFSFGVILWELV 572
++A EVL + NEK D++S G+I +E++
Sbjct: 196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 120/240 (50%), Gaps = 34/240 (14%)
Query: 372 DGGIRWEDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIEGTLKNYQKEIDII 429
D G R+ DL+ +G G +V+ + N D VA+K ++ ++K+ +EI II
Sbjct: 8 DLGSRYMDLK---PLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKII 62
Query: 430 KKLRHPNVL-LF-------------MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDI 475
++L H N++ +F +G++ + IV E++ L L + L+
Sbjct: 63 RRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQG-PLLEE 120
Query: 476 KRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVD-KNWTVKVGDFGLSSLKNATYLT 534
RL M + RG+ Y+H N ++HRDLK +NL ++ ++ +K+GDFGL+ + + Y
Sbjct: 121 HARLFMY-QLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH 177
Query: 535 A---KSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPW---NNLNLMQVV 587
G T + +P +L S + K+ D+++ G I E++T + + L MQ++
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + +G++ F P+ SL F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 376 RWEDLQ--LGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKK 431
++ED+ E +G G+YA V + NG + AVK+ + + +E++ + +
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKII--EKQAGHSRSRVFREVETLYQ 66
Query: 432 LR-HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMN 490
+ + N+L + R +V E L GS+ + K + + + R+ DVA ++
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQ-KHFNEREASRVVRDVAAALD 125
Query: 491 YLHHRNPPIVHRDLKSSNLLV---DKNWTVKVGDFGLSS---LKNA----TYLTAKSGRG 540
+LH + I HRDLK N+L +K VK+ DF L S L N+ T + G
Sbjct: 126 FLHTKG--IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 541 TPQWMAPEVL-----RSEPSNEKSDVFSFGVILWELVTASIPW 578
+ ++MAPEV+ ++ +++ D++S GV+L+ +++ P+
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 382 LGEEIGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL- 438
L + +G G+ A V+RG G A+KV+ ++ + +E +++KKL H N++
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQMREFEVLKKLNHKNIVK 71
Query: 439 LFMGAVASQERLGI-VTEFLPRGSLFKTLHK--NYQALDIKRRLRMALDVARGMNYLHHR 495
LF + R + + EF P GSL+ L + N L L + DV GMN+L R
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL--R 129
Query: 496 NPPIVHRDLKSSNLLV----DKNWTVKVGDFGLS-SLKNATYLTAKSGRGTPQWMAPE-- 548
IVHR++K N++ D K+ DFG + L++ S GT +++ P+
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV--SLYGTEEYLHPDMY 187
Query: 549 ---VLRSEPSNE---KSDVFSFGVILWELVTASIPW 578
VLR + + D++S GV + T S+P+
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 119/227 (52%), Gaps = 33/227 (14%)
Query: 376 RWEDL-QLGEEI-GLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKN-YQKEIDIIK 430
R+ED+ QL E++ G G++A V I + AVK+ E G +++ +E++++
Sbjct: 9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKII---EKQPGHIRSRVFREVEMLY 65
Query: 431 KLR-HPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGM 489
+ + H NVL + ++R +V E + GS+ +HK +++ + + DVA +
Sbjct: 66 QCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASAL 124
Query: 490 NYLHHRNPPIVHRDLKSSNLLVD---KNWTVKVGDFGLSS----------LKNATYLTAK 536
++LH++ I HRDLK N+L + + VK+ DF L S + LT
Sbjct: 125 DFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182
Query: 537 SGRGTPQWMAPEVLRS---EPS--NEKSDVFSFGVILWELVTASIPW 578
G+ ++MAPEV+ + E S +++ D++S GVIL+ L++ P+
Sbjct: 183 ---GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 26/225 (11%)
Query: 363 GDNETSCATDGGIRWEDLQLGEEIGLGSY-AVVYRGIWNGSDVAVKVYFGSEYIEGTLKN 421
GD ETS G I + + +G G+ +VYRG+++ DVAVK +
Sbjct: 12 GDEETSVVIVGKISFCPKDV---LGHGAEGTIVYRGMFDNRDVAVK-----RILPECFSF 63
Query: 422 YQKEIDIIKKL-RHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLR 480
+E+ ++++ HPNV+ + ++ I E K++ L ++ +
Sbjct: 64 ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PIT 122
Query: 481 MALDVARGMNYLHHRNPPIVHRDLKSSNLLV---DKNWTVK--VGDFGLS---SLKNATY 532
+ G+ +LH N IVHRDLK N+L+ + + +K + DFGL ++ ++
Sbjct: 123 LLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180
Query: 533 LTAKSGRGTPQWMAPEVLRSEPSNEKS----DVFSFGVILWELVT 573
GT W+APE+L SE E D+FS G + + +++
Sbjct: 181 SRRSGVPGTEGWIAPEML-SEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 479 LRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSL-----KNATYL 533
L + L +A + +LH + ++HRDLK SN+ + VKVGDFGL + + T L
Sbjct: 121 LHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 534 TAKSGR-------GTPQWMAPEVLRSEPSNEKSDVFSFGVILWELV 572
T GT +M+PE + + K D+FS G+IL+EL+
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 379 DLQLGEEIGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
D QL +G G+Y VV G VA+K + L+ +EI I+K +H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKHEN 70
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKT-LHK--NYQALDIKRRLRMALDVARGMNYLH 493
++ + + E L +T LH+ + Q L R + LH
Sbjct: 71 IITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL------SSLKNATYLTAKSGR----GTPQ 543
N ++HRDLK SNLL++ N +KV DFGL S+ N+ +SG T
Sbjct: 130 GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW 187
Query: 544 WMAPEV-LRSEPSNEKSDVFSFGVILWELVTAS--IPWNNL--NLMQVVGVVG 591
+ APEV L S + DV+S G IL EL P + L+ + G++G
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 479 LRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKN--------- 529
L + + +A + +LH + ++HRDLK SN+ + VKVGDFGL + +
Sbjct: 167 LHIFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 530 ---ATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELV 572
Y T GT +M+PE + + K D+FS G+IL+EL+
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 379 DLQLGEEIGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
D QL +G G+Y VV G VA+K + L+ +EI I+K +H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKHEN 70
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKT-LHK--NYQALDIKRRLRMALDVARGMNYLH 493
++ + + E L +T LH+ + Q L R + LH
Sbjct: 71 IITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL------SSLKNATYLTAKSGR----GTPQ 543
N ++HRDLK SNLL++ N +KV DFGL S+ N+ +SG T
Sbjct: 130 GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW 187
Query: 544 WMAPEV-LRSEPSNEKSDVFSFGVILWELVTAS--IPWNNL--NLMQVVGVVG 591
+ APEV L S + DV+S G IL EL P + L+ + G++G
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 379 DLQLGEEIGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPN 436
D QL +G G+Y VV G VA+K + L+ +EI I+K +H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKHEN 70
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKT-LHK--NYQALDIKRRLRMALDVARGMNYLH 493
++ + + E L +T LH+ + Q L R + LH
Sbjct: 71 IITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 494 HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL------SSLKNATYLTAKSGR----GTPQ 543
N ++HRDLK SNLL++ N +KV DFGL S+ N+ +SG T
Sbjct: 130 GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187
Query: 544 WMAPEV-LRSEPSNEKSDVFSFGVILWELVTAS--IPWNNL--NLMQVVGVVG 591
+ APEV L S + DV+S G IL EL P + L+ + G++G
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-MSYLL 170
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY-VVTRYY 229
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 386 IGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGA 443
+G G+Y V I +G VA+K E K +E+ ++K ++H NV+ +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 444 VASQERLGIVTEFLPRGSLFKTLHKNYQALDI--KRRLRMALDVARGMNYLHHRNPPIVH 501
L +F +T + ++ ++ + + +G+ Y+H +VH
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG--VVH 167
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPSNEKS 559
RDLK NL V+++ +K+ DFGL+ +A +G +W APEV+ S N+
Sbjct: 168 RDLKPGNLAVNEDCELKILDFGLARHADAEM----TGYVVTRWYRAPEVILSWMHYNQTV 223
Query: 560 DVFSFGVILWELVTASIPWNNLN----LMQVVGVVG 591
D++S G I+ E++T + + L Q++ V G
Sbjct: 224 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG 259
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 382 LGEEIGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVL- 438
L + +G G+ A V+RG G A+KV+ ++ + +E +++KKL H N++
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQMREFEVLKKLNHKNIVK 71
Query: 439 LFMGAVASQERLGI-VTEFLPRGSLFKTLHK--NYQALDIKRRLRMALDVARGMNYLHHR 495
LF + R + + EF P GSL+ L + N L L + DV GMN+L R
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL--R 129
Query: 496 NPPIVHRDLKSSNLLV----DKNWTVKVGDFGLS-SLKNATYLTAKSGRGTPQWMAPE-- 548
IVHR++K N++ D K+ DFG + L++ GT +++ P+
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY--GTEEYLHPDMY 187
Query: 549 ---VLRSEPSNE---KSDVFSFGVILWELVTASIPW 578
VLR + + D++S GV + T S+P+
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-MSYLL 170
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 229
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 386 IGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGA 443
+G G+Y V I +G VA+K E K +E+ ++K ++H NV+ +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 444 VASQERLGIVTEFLPRGSLFKTLHKNYQALDI--KRRLRMALDVARGMNYLHHRNPPIVH 501
L +F +T + L ++ + + +G+ Y+H +VH
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG--VVH 149
Query: 502 RDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPSNEKS 559
RDLK NL V+++ +K+ DFGL+ +A +G +W APEV+ S N+
Sbjct: 150 RDLKPGNLAVNEDCELKILDFGLARHADAEM----TGYVVTRWYRAPEVILSWMHYNQTV 205
Query: 560 DVFSFGVILWELVTASIPWNNLN----LMQVVGVVG 591
D++S G I+ E++T + + L Q++ V G
Sbjct: 206 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG 241
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-MSYLL 133
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 192
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 445 ASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRD 503
A ++ L IV E L G LF + + QA + + + + YLH N I HRD
Sbjct: 99 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRD 156
Query: 504 LKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
+K NLL N +K+ DFG + + ++ + + TP ++APEVL E ++ D
Sbjct: 157 VKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 215
Query: 561 VFSFGVILWELVTASIPW 578
++S GVI++ L+ P+
Sbjct: 216 MWSLGVIMYILLCGYPPF 233
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 445 ASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRD 503
A ++ L IV E L G LF + + QA + + + + YLH N I HRD
Sbjct: 91 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRD 148
Query: 504 LKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
+K NLL N +K+ DFG + + ++ + + TP ++APEVL E ++ D
Sbjct: 149 VKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 207
Query: 561 VFSFGVILWELVTASIPW 578
++S GVI++ L+ P+
Sbjct: 208 MWSLGVIMYILLCGYPPF 225
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-MSYLL 126
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 185
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-MSYLL 133
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 192
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 73 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-MSYLL 131
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 132 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 190
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 222
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHR 495
V ++ A ++ L IV E L G LF + + QA + + + + YLH
Sbjct: 77 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136
Query: 496 NPPIVHRDLKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
N I HRD+K NLL N +K+ DFG + + ++ + + TP ++APEVL
Sbjct: 137 N--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGP 193
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
E ++ D++S GVI++ L+ P+
Sbjct: 194 EKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 445 ASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRD 503
A ++ L IV E L G LF + + QA + + + + YLH N I HRD
Sbjct: 89 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRD 146
Query: 504 LKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
+K NLL N +K+ DFG + + ++ + + TP ++APEVL E ++ D
Sbjct: 147 VKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 205
Query: 561 VFSFGVILWELVTASIPW 578
++S GVI++ L+ P+
Sbjct: 206 MWSLGVIMYILLCGYPPF 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-MSYLL 125
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 126 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 184
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 445 ASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRD 503
A ++ L IV E L G LF + + QA + + + + YLH N I HRD
Sbjct: 90 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRD 147
Query: 504 LKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
+K NLL N +K+ DFG + + ++ + + TP ++APEVL E ++ D
Sbjct: 148 VKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 206
Query: 561 VFSFGVILWELVTASIPW 578
++S GVI++ L+ P+
Sbjct: 207 MWSLGVIMYILLCGYPPF 224
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-MSYLL 126
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV-VTRYY 185
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 445 ASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRD 503
A ++ L IV E L G LF + + QA + + + + YLH N I HRD
Sbjct: 83 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRD 140
Query: 504 LKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
+K NLL N +K+ DFG + + ++ + + TP ++APEVL E ++ D
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 561 VFSFGVILWELVTASIPW 578
++S GVI++ L+ P+
Sbjct: 200 MWSLGVIMYILLCGYPPF 217
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER-MSYLL 125
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 126 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV-VTRYY 184
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHR 495
V ++ A ++ L IV E L G LF + + QA + + + + YLH
Sbjct: 77 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136
Query: 496 NPPIVHRDLKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
N I HRD+K NLL N +K+ DFG + + ++ + + TP ++APEVL
Sbjct: 137 N--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGP 193
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
E ++ D++S GVI++ L+ P+
Sbjct: 194 EKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 445 ASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRD 503
A ++ L IV E L G LF + + QA + + + + YLH N I HRD
Sbjct: 84 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRD 141
Query: 504 LKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSD 560
+K NLL N +K+ DFG + + ++ + + TP ++APEVL E ++ D
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 200
Query: 561 VFSFGVILWELVTASIPW 578
++S GVI++ L+ P+
Sbjct: 201 MWSLGVIMYILLCGYPPF 218
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 26/182 (14%)
Query: 423 QKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
Q E+ + K HPN++ + + L +VT F+ GS + ++ +D L +A
Sbjct: 58 QGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHF--MDGMNELAIA 115
Query: 483 L---DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR 539
V + ++Y+HH VHR +K+S++L+ + G LS L++ + + R
Sbjct: 116 YILQGVLKALDYIHHMG--YVHRSVKASHILISVD-----GKVYLSGLRSNLSMISHGQR 168
Query: 540 -----GTPQ-------WMAPEVLRS--EPSNEKSDVFSFGVILWELVTASIPWNNLNLMQ 585
P+ W++PEVL+ + + KSD++S G+ EL +P+ ++ Q
Sbjct: 169 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 228
Query: 586 VV 587
++
Sbjct: 229 ML 230
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 401 GSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMGAVASQERLG------IVT 454
G +VAVK + K +E+ ++K + H N++ + Q+ L +V
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 455 EFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN 514
E + +L + +H LD +R + + G+ +LH I+HRDLK SN++V +
Sbjct: 109 ELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD 162
Query: 515 WTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTA 574
T+K+ DFGL+ ++ T + APEV+ D++S G I+ ELV
Sbjct: 163 CTLKILDFGLARTACTNFMMTPYV-VTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
Query: 575 SI 576
+
Sbjct: 222 CV 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 375 IRWEDLQLGEEIGLGSYAVV--YRGIWNGSDVAVKVYFGSEYIEGTLKNYQK-----EID 427
++ +DL+ E+G G+Y VV R + +G AVK I T+ + ++ ++D
Sbjct: 31 VKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVK------RIRATVNSQEQKRLLXDLD 84
Query: 428 I-IKKLRHPNVLLFMGAVASQERLGIVTEFLPRG--SLFKTLHKNYQALDIKRRLRMALD 484
I + + P + F GA+ + + I E +K + Q + ++A+
Sbjct: 85 ISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVS 144
Query: 485 VARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR----G 540
+ + + +LH + ++HRD+K SN+L++ VK DFG+S YL + G
Sbjct: 145 IVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKXCDFGISG-----YLVDDVAKDIDAG 198
Query: 541 TPQWMAPEVLRSEPSNE----KSDVFSFGVILWELVTASIPWNN 580
+ APE + E + + KSD++S G+ EL P+++
Sbjct: 199 CKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS 242
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 26/182 (14%)
Query: 423 QKEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA 482
Q E+ + K HPN++ + + L +VT F+ GS + ++ +D L +A
Sbjct: 74 QGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHF--MDGMNELAIA 131
Query: 483 L---DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR 539
V + ++Y+HH VHR +K+S++L+ + G LS L++ + + R
Sbjct: 132 YILQGVLKALDYIHHMG--YVHRSVKASHILISVD-----GKVYLSGLRSNLSMISHGQR 184
Query: 540 -----GTPQ-------WMAPEVLRS--EPSNEKSDVFSFGVILWELVTASIPWNNLNLMQ 585
P+ W++PEVL+ + + KSD++S G+ EL +P+ ++ Q
Sbjct: 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 244
Query: 586 VV 587
++
Sbjct: 245 ML 246
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHR 495
V ++ A ++ L IV E L G LF + + QA + + + + YLH
Sbjct: 121 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 180
Query: 496 NPPIVHRDLKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
N I HRD+K NLL N +K+ DFG + + ++ + + TP ++APEVL
Sbjct: 181 N--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGP 237
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
E ++ D++S GVI++ L+ P+
Sbjct: 238 EKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHR 495
V ++ A ++ L IV E L G LF + + QA + + + + YLH
Sbjct: 127 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 186
Query: 496 NPPIVHRDLKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
N I HRD+K NLL N +K+ DFG + + ++ + + TP ++APEVL
Sbjct: 187 N--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGP 243
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
E ++ D++S GVI++ L+ P+
Sbjct: 244 EKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHR 495
V ++ A ++ L IV E L G LF + + QA + + + + YLH
Sbjct: 75 VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 134
Query: 496 NPPIVHRDLKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
N I HRD+K NLL N +K+ DFG + + ++ + TP ++APEVL
Sbjct: 135 N--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTEPCYTPYYVAPEVLGP 191
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
E ++ D++S GVI++ L+ P+
Sbjct: 192 EKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 438 LLFMGAVASQERLGIVTEFLPRGSL--FKTLHKNYQALD--IKRRLRMALDVARGMNYL- 492
L+ M V + + ++ F P+ +L F+ ++ + +D + + ++M LD R M+YL
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHER-MSYLL 132
Query: 493 --------HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQW 544
H + I+HRDLK SN++V + T+K+ DFGL+ +++ T +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV-VTRYY 191
Query: 545 MAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
APEV+ E D++S G I+ E+V I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 385 EIGLGSYAVVY--RGIWNGSD-VAVKVYFGSEYIEGTLKNYQKEIDIIKKLR---HPNVL 438
EIG G+Y V+ R + NG VA+K EG + +E+ +++ L HPNV+
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 439 -LFMGAVAS----QERLGIVTEFLPRG---SLFKTLHKNYQALDIKRRLRMALDVARGMN 490
LF S + +L +V E + + L K IK M + RG++
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD---MMFQLLRGLD 134
Query: 491 YLH-HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
+LH HR +VHRDLK N+LV + +K+ DFGL+ + + + S T + APEV
Sbjct: 135 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEV 190
Query: 550 LRSEPSNEKSDVFSFGVILWEL 571
L D++S G I E+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEM 212
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEV-LRSEPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE+ L +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNAMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 25/239 (10%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSD--VAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
ED ++ + IG G++ V +D A+K+ E ++ +++E D++
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQAL--DIKR----RLRMALDVARG 488
+ A L +V ++ G L L K L ++ R + +A+D
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKS--GRGTPQWMA 546
++Y VHRD+K N+L+D N +++ DFG S LK T +S GTP +++
Sbjct: 194 LHY--------VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYIS 244
Query: 547 PEVLRSEPSNE-----KSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELP 600
PE+L++ + + D +S GV ++E++ P+ +L++ G + R + P
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP 303
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 22/171 (12%)
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQAL--DIKR----RLRMALDVARGMNYLHHRN 496
A + L +V ++ G L L K L D+ R + +A+D ++Y
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY----- 212
Query: 497 PPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKS--GRGTPQWMAPEVLRSEP 554
VHRD+K N+L+D N +++ DFG S LK T +S GTP +++PE+L++
Sbjct: 213 ---VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAME 268
Query: 555 S-----NEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELP 600
+ D +S GV ++E++ P+ +L++ G + + R + P
Sbjct: 269 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 319
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 424 KEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMAL 483
+E+ L P ++ GAV + I E L GSL + L K L R L
Sbjct: 99 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLG 157
Query: 484 DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWT-VKVGDFGLSSLKN-----ATYLTAKS 537
G+ YLH R I+H D+K+ N+L+ + + + DFG + + LT
Sbjct: 158 QALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 538 GRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
GT MAPEV+ +P + K D++S ++ ++ PW
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 424 KEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMAL 483
+E+ L P ++ GAV + I E L GSL + + K L R L
Sbjct: 113 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-KQMGCLPEDRALYYLG 171
Query: 484 DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWT-VKVGDFGLSSLKN-----ATYLTAKS 537
G+ YLH R I+H D+K+ N+L+ + + + DFG + + LT
Sbjct: 172 QALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
Query: 538 GRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
GT MAPEV+ +P + K D++S ++ ++ PW
Sbjct: 230 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 22/171 (12%)
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQAL--DIKR----RLRMALDVARGMNYLHHRN 496
A + L +V ++ G L L K L D+ R + +A+D ++Y
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY----- 196
Query: 497 PPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKS--GRGTPQWMAPEVLRSEP 554
VHRD+K N+L+D N +++ DFG S LK T +S GTP +++PE+L++
Sbjct: 197 ---VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAME 252
Query: 555 S-----NEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELP 600
+ D +S GV ++E++ P+ +L++ G + + R + P
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 303
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 424 KEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMAL 483
+E+ L P ++ GAV + I E L GSL + + K L R L
Sbjct: 115 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-KQMGCLPEDRALYYLG 173
Query: 484 DVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWT-VKVGDFGLSSLKN-----ATYLTAKS 537
G+ YLH R I+H D+K+ N+L+ + + + DFG + + LT
Sbjct: 174 QALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231
Query: 538 GRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
GT MAPEV+ +P + K D++S ++ ++ PW
Sbjct: 232 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 385 EIGLGSYAVVY--RGIWNGSD-VAVKVYFGSEYIEGTLKNYQKEIDIIKKLR---HPNVL 438
EIG G+Y V+ R + NG VA+K EG + +E+ +++ L HPNV+
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 439 -LFMGAVAS----QERLGIVTEFLPRG---SLFKTLHKNYQALDIKRRLRMALDVARGMN 490
LF S + +L +V E + + L K IK M + RG++
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD---MMFQLLRGLD 134
Query: 491 YLH-HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
+LH HR +VHRDLK N+LV + +K+ DFGL+ + + + S T + APEV
Sbjct: 135 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEV 190
Query: 550 LRSEPSNEKSDVFSFGVILWEL 571
L D++S G I E+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEM 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 22/202 (10%)
Query: 385 EIGLGSYAVVY--RGIWNGSD-VAVKVYFGSEYIEGTLKNYQKEIDIIKKLR---HPNVL 438
EIG G+Y V+ R + NG VA+K EG + +E+ +++ L HPNV+
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 439 -LFMGAVAS----QERLGIVTEFLPR---GSLFKTLHKNYQALDIKRRLRMALDVARGMN 490
LF S + +L +V E + + L K IK M + RG++
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD---MMFQLLRGLD 134
Query: 491 YLH-HRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEV 549
+LH HR +VHRDLK N+LV + +K+ DFGL+ + + + S T + APEV
Sbjct: 135 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEV 190
Query: 550 LRSEPSNEKSDVFSFGVILWEL 571
L D++S G I E+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEM 212
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 437 VLLFMGAVASQERLGIVTEFLPRGSLFKTLH-KNYQALDIKRRLRMALDVARGMNYLHHR 495
V ++ A ++ L IV E L G LF + + QA + + + + YLH
Sbjct: 121 VDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSI 180
Query: 496 NPPIVHRDLKSSNLLVDK---NWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
N I HRD+K NLL N +K+ DFG + + ++ + + TP ++APEVL
Sbjct: 181 N--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGP 237
Query: 553 EPSNEKSDVFSFGVILWELVTASIPW 578
E ++ D +S GVI + L+ P+
Sbjct: 238 EKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYL 492
P ++ A + ++L + + + G L L H + D++ A ++ G+ ++
Sbjct: 251 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILGLEHM 307
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
H+R +V+RDLK +N+L+D++ V++ D GL+ + + + GT +MAPEVL+
Sbjct: 308 HNRF--VVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHASVGTHGYMAPEVLQK 363
Query: 553 EPSNEKS-DVFSFGVILWELVTASIPWNN 580
+ + S D FS G +L++L+ P+
Sbjct: 364 GVAYDSSADWFSLGCMLFKLLRGHSPFRQ 392
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYL 492
P ++ A + ++L + + + G L L H + D++ A ++ G+ ++
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILGLEHM 308
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
H+R +V+RDLK +N+L+D++ V++ D GL+ + + + GT +MAPEVL+
Sbjct: 309 HNRF--VVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHASVGTHGYMAPEVLQK 364
Query: 553 EPSNEKS-DVFSFGVILWELVTASIPWNN 580
+ + S D FS G +L++L+ P+
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYL 492
P ++ A + ++L + + + G L L H + D++ A ++ G+ ++
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILGLEHM 308
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
H+R +V+RDLK +N+L+D++ V++ D GL+ + + + GT +MAPEVL+
Sbjct: 309 HNRF--VVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHASVGTHGYMAPEVLQK 364
Query: 553 EPSNEKS-DVFSFGVILWELVTASIPWNN 580
+ + S D FS G +L++L+ P+
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTL--HKNYQALDIKRRLRMALDVARGMNYL 492
P ++ A + ++L + + + G L L H + D++ A ++ G+ ++
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF---YAAEIILGLEHM 308
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLRS 552
H+R +V+RDLK +N+L+D++ V++ D GL+ + + + GT +MAPEVL+
Sbjct: 309 HNRF--VVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHASVGTHGYMAPEVLQK 364
Query: 553 EPSNEKS-DVFSFGVILWELVTASIPWNN 580
+ + S D FS G +L++L+ P+
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S+ + + K +E+ ++K ++H NV+ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 157
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 158 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 212
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 213 NQTVDIWSVGCIMAELLT 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
IG G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 150
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 151 -IIHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 205
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 206 NQTVDIWSVGCIMAELLT 223
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 151
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 152 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 206
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 207 NQTVDIWSVGCIMAELLT 224
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGXVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 147
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 148 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 202
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 203 NQTVDIWSVGCIMAELLT 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 157
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 158 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 212
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 213 NQTVDIWSVGCIMAELLT 230
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 157
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 158 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 212
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 213 NQTVDIWSVGCIMAELLT 230
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 113 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 168
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 169 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 223
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 224 NQTVDIWSVGCIMAELLT 241
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 147
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 148 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 202
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 203 NQTVDIWSVGCIMAELLT 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 109 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 164
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 165 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 219
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 220 NQTVDIWSVGCIMAELLT 237
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 152
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ A +T G +W APE++ +
Sbjct: 153 -IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMT---GYVATRWYRAPEIMLNWMHY 207
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 208 NQTVDIWSVGCIMAELLT 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 150
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 151 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 205
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 206 NQTVDIWSVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 89 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 144
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 145 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 199
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 200 NQTVDIWSVGCIMAELLT 217
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 151
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 152 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 206
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 207 NQTVDIWSVGCIMAELLT 224
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 101 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 156
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 157 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 211
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 212 NQTVDIWSVGCIMAELLT 229
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 152
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 153 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 207
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 208 NQTVDIWSVGCIMAELLT 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 378 EDLQLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHP 435
E Q +G G+Y V S + + V S + + K +E+ ++K ++H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 436 NVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGM 489
NV+ +F A + +E + +VT + G+ + K + D + + + RG+
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGL 167
Query: 490 NYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APE 548
Y+H + I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE
Sbjct: 168 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPE 221
Query: 549 VLRS-EPSNEKSDVFSFGVILWELVT 573
++ + N D++S G I+ EL+T
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 152
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ A +T G +W APE++ +
Sbjct: 153 -IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMT---GYVATRWYRAPEIMLNWMHY 207
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 208 NQTVDIWSVGCIMAELLT 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 110 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 165
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 166 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 220
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 221 NQTVDIWSVGCIMAELLT 238
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 36/190 (18%)
Query: 414 YIEGTLKNYQKEIDIIKKLRHPNVLLFMGA-------------VASQERLGIVTEFLPRG 460
+ E L E+ ++ L H V+ + A V + L I E+
Sbjct: 41 HTEEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENR 100
Query: 461 SLFKTLHK---NYQALDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTV 517
+L+ +H N Q + R R L+ ++Y+H + I+HR+LK N+ +D++ V
Sbjct: 101 TLYDLIHSENLNQQRDEYWRLFRQILE---ALSYIHSQG--IIHRNLKPXNIFIDESRNV 155
Query: 518 KVGDFGLSSLKNATYLTAK--------------SGRGTPQWMAPEVLR-SEPSNEKSDVF 562
K+GDFGL+ + + K S GT ++A EVL + NEK D +
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXY 215
Query: 563 SFGVILWELV 572
S G+I +E +
Sbjct: 216 SLGIIFFEXI 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 147
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 148 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 202
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 203 NQTVDIWSVGCIMAELLT 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 150
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 151 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 205
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 206 NQTVDIWSVGCIMAELLT 223
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 152
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ A +T G +W APE++ +
Sbjct: 153 -IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMT---GYVATRWYRAPEIMLNWMHY 207
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 208 NQTVDIWSVGCIMAELLT 225
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 22/216 (10%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYR--GIWNGSDVAVKVYFGSEYIEGTLKNYQ-KEIDIIKK 431
+ W QL +G GS+ V+R G AVK L+ ++ +E+
Sbjct: 92 VHWATHQL--RLGRGSFGEVHRMEDKQTGFQCAVKKV--------RLEVFRAEELMACAG 141
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L P ++ GAV + I E L GSL + L K L R L G+ Y
Sbjct: 142 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEY 200
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWT-VKVGDFGLSSLKNA-----TYLTAKSGRGTPQWM 545
LH R I+H D+K+ N+L+ + + + DFG + + LT GT M
Sbjct: 201 LHSRR--ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHM 258
Query: 546 APEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNL 581
APEV+ + K DV+S ++ ++ PW
Sbjct: 259 APEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQF 294
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 87 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 142
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 143 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 197
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 198 NQTVDIWSVGCIMAELLT 215
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 87 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 142
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 143 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 197
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 198 NQTVDIWSVGCIMAELLT 215
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K+ + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDSELKILDFGLCRHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 141
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 142 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 196
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 197 NQTVDIWSVGCIMAELLT 214
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 150
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 151 -IIHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 205
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 206 NQTVDIWSVGCIMAELLT 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 88 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 143
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 144 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 198
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 199 NQTVDIWSVGCIMAELLT 216
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 101 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 156
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 157 -IIHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 211
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 212 NQTVDIWSVGCIMAELLT 229
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 147
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 148 -IIHRDLKPSNLAVNEDSELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 202
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 203 NQTVDIWSVGCIMAELLT 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 151
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + +G +W APE++ +
Sbjct: 152 -IIHRDLKPSNLAVNEDSELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 206
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 207 NQTVDIWSVGCIMAELLT 224
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 113 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 168
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ DFGL+ + G +W APE++ +
Sbjct: 169 -IIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMXGYVATRWYRAPEIMLNWMHY 223
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 224 NQTVDIWSVGCIMAELLT 241
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
+IG G++ V+ R G VA+K EG +EI I++ L+H NV+ +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 443 AVASQER--------LGIVTEFLPR--GSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
++ + +V +F L + + +IKR ++M L+ G+ Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 141
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS---SLKNATYLTAKSGRGTPQWM-APE 548
H RN I+HRD+K++N+L+ ++ +K+ DFGL+ SL + R W PE
Sbjct: 142 H-RNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 549 VLRSEPS-NEKSDVFSFGVILWELVTAS 575
+L E D++ G I+ E+ T S
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRS 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLT 129
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DFGL+ +
Sbjct: 130 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 182
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
+G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLT 142
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DFGL+ +
Sbjct: 143 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 195
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
+G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 76 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLT 133
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DFGL+ +
Sbjct: 134 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 186
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
+G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 187 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLT 143
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DFGL+ +
Sbjct: 144 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 196
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
+G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ D+GL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDYGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLT 123
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DFGL+ +
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 176
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
+G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
+IG G++ V+ R G VA+K EG +EI I++ L+H NV+ +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 443 AVASQER--------LGIVTEFLPR--GSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
++ + +V +F L + + +IKR ++M L+ G+ Y+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 141
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS---SLKNATYLTAKSGRGTPQWM-APE 548
H RN I+HRD+K++N+L+ ++ +K+ DFGL+ SL + R W PE
Sbjct: 142 H-RNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 549 VLRSEPS-NEKSDVFSFGVILWELVTAS 575
+L E D++ G I+ E+ T S
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRS 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
+IG G++ V+ R G VA+K EG +EI I++ L+H NV+ +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 443 AVASQER--------LGIVTEFLPR--GSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
++ + +V +F L + + +IKR ++M L+ G+ Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 141
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS---SLKNATYLTAKSGRGTPQWM-APE 548
H RN I+HRD+K++N+L+ ++ +K+ DFGL+ SL + R W PE
Sbjct: 142 H-RNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 549 VLRSEPS-NEKSDVFSFGVILWELVTAS 575
+L E D++ G I+ E+ T S
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRS 227
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 385 EIGLGSYAVVY--RGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
+IG G++ V+ R G VA+K EG +EI I++ L+H NV+ +
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 443 AVASQER--------LGIVTEFLPR--GSLFKTLHKNYQALDIKRRLRMALDVARGMNYL 492
++ + +V +F L + + +IKR ++M L+ G+ Y+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 140
Query: 493 HHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS---SLKNATYLTAKSGRGTPQWM-APE 548
H RN I+HRD+K++N+L+ ++ +K+ DFGL+ SL + R W PE
Sbjct: 141 H-RNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 198
Query: 549 VLRSEPS-NEKSDVFSFGVILWELVTAS 575
+L E D++ G I+ E+ T S
Sbjct: 199 LLLGERDYGPPIDLWGAGCIMAEMWTRS 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLT 119
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DFGL+ +
Sbjct: 120 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 172
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
+G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 22/216 (10%)
Query: 375 IRWEDLQLGEEIGLGSYAVVYR--GIWNGSDVAVKVYFGSEYIEGTLKNYQ-KEIDIIKK 431
+ W QL +G GS+ V+R G AVK + L+ ++ +E+
Sbjct: 73 VHWATHQL--RLGRGSFGEVHRMEDKQTGFQCAVK--------KVRLEVFRAEELMACAG 122
Query: 432 LRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNY 491
L P ++ GAV + I E L GSL + L K L R L G+ Y
Sbjct: 123 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEY 181
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWT-VKVGDFGLSSLKNAT-----YLTAKSGRGTPQWM 545
LH R I+H D+K+ N+L+ + + + DFG + LT GT M
Sbjct: 182 LHSRR--ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHM 239
Query: 546 APEVLRSEPSNEKSDVFSFGVILWELVTASIPWNNL 581
APEV+ + K DV+S ++ ++ PW
Sbjct: 240 APEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQF 275
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLT 119
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DFGL+ +
Sbjct: 120 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 172
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
+G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLT 123
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DFGL+ +
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 176
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
+G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLT 123
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DFGL+ +
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 176
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
+G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLT 143
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DFGL+ +
Sbjct: 144 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 196
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 197 DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 385 EIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFMG 442
++G G+Y VY+ I VA+K EG +E+ ++K+L+H N++
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 443 AVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMAL--DVARGMNYLHHRNPPIV 500
+ RL ++ E+ L K + KN D+ R+ + + G+N+ H R +
Sbjct: 101 VIHHNHRLHLIFEY-AENDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSRR--CL 154
Query: 501 HRDLKSSNLLV-----DKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWMAPEVLR-SEP 554
HRDLK NLL+ + +K+GDFGL+ T + PE+L S
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRH 214
Query: 555 SNEKSDVFSFGVILWELV--TASIPWNNL--NLMQVVGVVGFMD 594
+ D++S I E++ T P ++ L ++ V+G D
Sbjct: 215 YSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD 258
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLT 119
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DFGL+ +
Sbjct: 120 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 172
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
+G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 173 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 386 IGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGT------LKNYQKEIDIIKKLRHPNV 437
+G G++ V+ + +V VK + +E L EI I+ ++ H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 438 LLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
+ + +Q +V E G + LD + + + YL ++
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD- 150
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGR------GTPQWMAPEVLR 551
I+HRD+K N+++ +++T+K+ DFG +A YL + G+ GT ++ APEVL
Sbjct: 151 -IIHRDIKDENIVIAEDFTIKLIDFG-----SAAYL--ERGKLFYTFCGTIEYCAPEVLM 202
Query: 552 SEP-SNEKSDVFSFGVILWELVTASIPWNNLN 582
P + +++S GV L+ LV P+ L
Sbjct: 203 GNPYRGPELEMWSLGVTLYTLVFEENPFCELE 234
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 96/180 (53%), Gaps = 24/180 (13%)
Query: 424 KEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKR 477
+E+ ++K L+H NV+ +F A + ++ + +VT + G+ + K+ QAL +
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKS-QALSDEH 132
Query: 478 RLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKS 537
+ + RG+ Y+H + I+HRDLK SN+ V+++ +++ DFGL+ + +
Sbjct: 133 VQFLVYQLLRGLKYIH--SAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMT 186
Query: 538 GRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT--ASIPWNNL-----NLMQVVG 588
G +W APE++ + N+ D++S G I+ EL+ A P ++ +M+VVG
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG 246
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 95/180 (52%), Gaps = 24/180 (13%)
Query: 424 KEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKR 477
+E+ ++K L+H NV+ +F A + ++ + +VT + G+ + K QAL +
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKC-QALSDEH 124
Query: 478 RLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKS 537
+ + RG+ Y+H + I+HRDLK SN+ V+++ +++ DFGL+ + +
Sbjct: 125 VQFLVYQLLRGLKYIH--SAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD----EEMT 178
Query: 538 GRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT--ASIPWNNL-----NLMQVVG 588
G +W APE++ + N+ D++S G I+ EL+ A P ++ +M+VVG
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG 238
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ FGL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILGFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 424 KEIDIIKKLRHPNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY---QALDIKRRLR 480
+E+ ++K L+H NV+ + + +E +L N QAL +
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF 135
Query: 481 MALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRG 540
+ + RG+ Y+H + I+HRDLK SN+ V+++ +++ DFGL+ + +G
Sbjct: 136 LVYQLLRGLKYIH--SAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMTGYV 189
Query: 541 TPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT--ASIPWNNL-----NLMQVVG 588
+W APE++ + N+ D++S G I+ EL+ A P ++ +M+VVG
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG 246
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 15/235 (6%)
Query: 378 EDLQLGEEIGLGSYA--VVYRGIWNGSDVAVKVYFGSEYIE-GTLKNYQKEIDIIKKLRH 434
+D ++ + IG G+++ V + G A+K+ + ++ G + +++E D++
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 435 PNVLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHH 494
+ A + L +V E+ G L L K + + + ++ ++ +H
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 495 RNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKS--GRGTPQWMAPEVLRS 552
VHRD+K N+L+D+ +++ DFG S LK T +S GTP +++PE+L++
Sbjct: 181 LG--YVHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 553 -------EPSNEKSDVFSFGVILWELVTASIPWNNLNLMQVVGVVGFMDRRLELP 600
+ D ++ GV +E+ P+ + + G + L LP
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLP 292
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 110/250 (44%), Gaps = 50/250 (20%)
Query: 381 QLGEEIGLGSYAVVYRGI--WNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLR-HPNV 437
+L +++G G+Y +V++ I G VAVK F + + +EI I+ +L H N+
Sbjct: 12 ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI 71
Query: 438 LLFMGAVASQERLGIVTEF---------LPRGSLFKTLHKNYQALDIKRRLRMALDVARG 488
+ + + + + F + R ++ + +HK Y + + +
Sbjct: 72 VNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY----------VVYQLIKV 121
Query: 489 MNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLS-SLKNATYLT------------- 534
+ YLH + ++HRD+K SN+L++ VKV DFGLS S N +T
Sbjct: 122 IKYLH--SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 535 -------AKSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPW---NNLN- 582
T + APE+L K D++S G IL E++ + + +N
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
Query: 583 LMQVVGVVGF 592
L +++GV+ F
Sbjct: 240 LERIIGVIDF 249
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ D GL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDAGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ D GL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDRGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 386 IGLGSYAVVYRGI-WNGSDVAVKVYFGSEYIEGTL---------KNYQKEIDIIKKLRHP 435
I GSY V G+ G VA+K F + T+ K +EI ++ HP
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 436 NVLLFMGAVASQE-----RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMN 490
N+L E +L +VTE + R L + +H + + + G++
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 491 YLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APE- 548
LH +VHRDL N+L+ N + + DF L+ + T K+ T +W APE
Sbjct: 149 VLHEAG--VVHRDLHPGNILLADNNDITICDFNLA--REDTADANKTHYVTHRWYRAPEL 204
Query: 549 VLRSEPSNEKSDVFSFGVILWE------LVTASIPWNNLNLMQVVGVVG 591
V++ + + D++S G ++ E L S +N LN ++V VVG
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN--KIVEVVG 251
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 19/198 (9%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVL----L 439
+G G+Y V + + V V S + + K +E+ ++K ++H NV+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 440 FMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNP 497
F A + +E + +VT + G+ + K + D + + + RG+ Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD- 145
Query: 498 PIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APEVLRS-EPS 555
I+HRDLK SNL V+++ +K+ D GL+ + +G +W APE++ +
Sbjct: 146 -IIHRDLKPSNLAVNEDCELKILDGGLARHTD----DEMTGYVATRWYRAPEIMLNWMHY 200
Query: 556 NEKSDVFSFGVILWELVT 573
N+ D++S G I+ EL+T
Sbjct: 201 NQTVDIWSVGCIMAELLT 218
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 386 IGLGSYAVVYRGI-WNGSDVAVKVYFGSEYIEGTL---------KNYQKEIDIIKKLRHP 435
I GSY V G+ G VA+K F + T+ K +EI ++ HP
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 436 NVLLFMGAVASQE-----RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMN 490
N+L E +L +VTE + R L + +H + + + G++
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 491 YLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYLTAKSGRGTPQWM-APE- 548
LH +VHRDL N+L+ N + + DF L+ + T K+ T +W APE
Sbjct: 149 VLHEAG--VVHRDLHPGNILLADNNDITICDFNLA--REDTADANKTHYVTHRWYRAPEL 204
Query: 549 VLRSEPSNEKSDVFSFGVILWE------LVTASIPWNNLNLMQVVGVVG 591
V++ + + D++S G ++ E L S +N LN ++V VVG
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN--KIVEVVG 251
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 381 QLGEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLF 440
+LGE G SY + G+ +G A+K E + + Q+E D+ + HPN+L
Sbjct: 36 KLGE--GGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNHPNILRL 91
Query: 441 MGAV----ASQERLGIVTEFLPRGSLFKTLHK-----NYQALDIKRRLRMALDVARGMNY 491
+ ++ ++ F RG+L+ + + N+ D + L + L + RG+
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED--QILWLLLGICRGLEA 149
Query: 492 LHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGL---------SSLKNATYLTAKSGRGTP 542
+H + HRDLK +N+L+ + D G S + T + R T
Sbjct: 150 IHAKG--YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 543 QWMAPEVLRSEPS---NEKSDVFSFGVILWELVTASIPWN 579
+ APE+ + +E++DV+S G +L+ ++ P++
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 420 KNYQKEIDIIKKLRHPNVL----LFMGAVASQE--RLGIVTEFLPRGSLFKTLHKNYQAL 473
K +E+ ++K ++H NV+ +F A + +E + +VT + G+ + K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLT 123
Query: 474 DIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSSLKNATYL 533
D + + + RG+ Y+H + I+HRDLK SNL V+++ +K+ DF L+ +
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTD---- 176
Query: 534 TAKSGRGTPQWM-APEVLRS-EPSNEKSDVFSFGVILWELVT 573
+G +W APE++ + N+ D++S G I+ EL+T
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEG-TLKNYQKEIDIIKKLRHPNVLLFM- 441
IG GS+ VVY+ +G VA+K + ++G KN +E+ I++KL H N++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK-----KVLQGKAFKN--RELQIMRKLDHCNIVRLRY 80
Query: 442 -----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHH 494
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 495 RNPPIVHRDLKSSNLLVDKNWTV-KVGDFG-----LSSLKNATYLTAKSGRGTPQWMAPE 548
I HRD+K NLL+D + V K+ DFG + N +Y+ ++ R APE
Sbjct: 141 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR------APE 192
Query: 549 VLRSEPSNEKS-DVFSFGVILWELV 572
++ S DV+S G +L EL+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEG-TLKNYQKEIDIIKKLRHPNVLLFM- 441
IG GS+ VVY+ +G VA+K + ++G KN +E+ I++KL H N++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK-----KVLQGKAFKN--RELQIMRKLDHCNIVRLRY 80
Query: 442 -----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHH 494
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 495 RNPPIVHRDLKSSNLLVDKNWTV-KVGDFG-----LSSLKNATYLTAKSGRGTPQWMAPE 548
I HRD+K NLL+D + V K+ DFG + N +Y+ ++ R APE
Sbjct: 141 FG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR------APE 192
Query: 549 VLRSEPSNEKS-DVFSFGVILWELV 572
++ S DV+S G +L EL+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 109
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFG-----LSSLKNATYLTAKSGRGTPQWMAPEV 549
I HRD+K NLL+D + V K+ DFG + N +Y+ ++ R APE+
Sbjct: 170 G--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR------APEL 221
Query: 550 LRSEPSNEKS-DVFSFGVILWELV 572
+ S DV+S G +L EL+
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELL 245
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 115
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFG-----LSSLKNATYLTAKSGRGTPQWMAPEV 549
I HRD+K NLL+D + V K+ DFG + N +Y+ ++ R APE+
Sbjct: 176 G--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR------APEL 227
Query: 550 LRSEPSNEKS-DVFSFGVILWELV 572
+ S DV+S G +L EL+
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 117
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 177
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFG-----LSSLKNATYLTAKSGRGTPQWMAPEV 549
I HRD+K NLL+D + V K+ DFG + N +Y+ ++ R APE+
Sbjct: 178 G--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR------APEL 229
Query: 550 LRSEPSNEKS-DVFSFGVILWELV 572
+ S DV+S G +L EL+
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELL 253
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 160
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 220
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFG-----LSSLKNATYLTAKSGRGTPQWMAPEV 549
I HRD+K NLL+D + V K+ DFG + N +Y+ ++ R APE+
Sbjct: 221 G--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR------APEL 272
Query: 550 LRSEPSNEKS-DVFSFGVILWELV 572
+ S DV+S G +L EL+
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELL 296
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 119
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 179
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFG-----LSSLKNATYLTAKSGRGTPQWMAPEV 549
I HRD+K NLL+D + V K+ DFG + N +Y+ ++ R APE+
Sbjct: 180 G--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR------APEL 231
Query: 550 LRSEPSNEKS-DVFSFGVILWELV 572
+ S DV+S G +L EL+
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELL 255
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 94
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 154
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFG-----LSSLKNATYLTAKSGRGTPQWMAPEV 549
I HRD+K NLL+D + V K+ DFG + N +Y+ ++ R APE+
Sbjct: 155 G--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR------APEL 206
Query: 550 LRSEPSNEKS-DVFSFGVILWELV 572
+ S DV+S G +L EL+
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELL 230
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 86
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 146
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFG-----LSSLKNATYLTAKSGRGTPQWMAPEV 549
I HRD+K NLL+D + V K+ DFG + N +Y+ ++ R APE+
Sbjct: 147 G--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR------APEL 198
Query: 550 LRSEPSNEKS-DVFSFGVILWELV 572
+ S DV+S G +L EL+
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELL 222
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 81
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFG-----LSSLKNATYLTAKSGRGTPQWMAPEV 549
I HRD+K NLL+D + V K+ DFG + N +Y+ ++ R APE+
Sbjct: 142 G--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR------APEL 193
Query: 550 LRSEPSNEKS-DVFSFGVILWELV 572
+ S DV+S G +L EL+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 379 DLQLGEEIGLGSYAVVYRG--IWNGSDVAVKV-----YFGSEYIEGTLKNYQKEIDIIKK 431
+ +LG +G G + V+ G + + VA+KV G + ++ E+ ++ K
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSV-TCPLEVALLWK 90
Query: 432 LR----HPNVLLFMGAVASQERLGIVTEF-LPRGSLFKTLHKNYQALDIKRRLRMALDVA 486
+ HP V+ + +QE +V E LP LF + + + R VA
Sbjct: 91 VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVA 150
Query: 487 RGMNYLHHRNPPIVHRDLKSSNLLVD-KNWTVKVGDFGLSSLKNATYLTAKSGR---GTP 542
+ + H R +VHRD+K N+L+D + K+ DFG +L + T G P
Sbjct: 151 -AIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPP 207
Query: 543 QWMAPEVLRSEPSNEKSDVFSFGVILWELVTASIPWNN 580
+W++ + P+ V+S G++L+++V IP+
Sbjct: 208 EWISRHQYHALPAT----VWSLGILLYDMVCGDIPFER 241
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 44/226 (19%)
Query: 385 EIGLGSY--AVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNV----- 437
++G G++ ++ + I N AVKV I+ ++ + E DI+KK+++ ++
Sbjct: 42 KMGDGTFGRVLLCQHIDNKKYYAVKV---VRNIKKYTRSAKIEADILKKIQNDDINNNNI 98
Query: 438 LLFMGAVASQERLGIVTEFLPRG-SLFKTLHKN-YQALDIKRRLRMALDVARGMNYLHHR 495
+ + G + + ++ E P G SL++ + +N Y I+ +++ + +NYL R
Sbjct: 99 VKYHGKFMYYDHMCLIFE--PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYL--R 154
Query: 496 NPPIVHRDLKSSNLLVD-------------------------KNWTVKVGDFGLSSLKNA 530
+ H DLK N+L+D K+ +K+ DFG ++ K+
Sbjct: 155 KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD 214
Query: 531 TYLTAKSGRGTPQWMAPEVLRSEPSNEKSDVFSFGVILWELVTASI 576
+ S T Q+ APEV+ + + SD++SFG +L EL T S+
Sbjct: 215 YH---GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSL 257
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 115
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQ--------WMA 546
I HRD+K NLL+D + V K+ DFG +A L RG P + A
Sbjct: 176 G--ICHRDIKPQNLLLDPDTAVLKLCDFG-----SAKQLV----RGEPNVSXICSRYYRA 224
Query: 547 PEVLRSEPSNEKS-DVFSFGVILWELV 572
PE++ S DV+S G +L EL+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 39/222 (17%)
Query: 386 IGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKLRHPNVLLFMGA 443
IG GSY V V + E + K +EI I+ +L H +V+ +
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 444 VASQE-----RLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMALDVARGMNYLHHRNPP 498
V ++ L +V E S FK L + L + ++ G+ Y+H +
Sbjct: 121 VIPKDVEKFDELYVVLEIA--DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH--SAG 176
Query: 499 IVHRDLKSSNLLVDKNWTVKVGDFGLS--------------------SLKNATYLTAK-- 536
I+HRDLK +N LV+++ +VKV DFGL+ + T+ K
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNL 236
Query: 537 ----SGRGTPQWM-APE-VLRSEPSNEKSDVFSFGVILWELV 572
+G +W APE +L E E DV+S G I EL+
Sbjct: 237 KRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 384 EEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKL-RHPNVLLF 440
E+IG G + V++ + + + + G++ +N +E+ L +H +V+ +
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA---LDVARGMNYLHHRNP 497
A A + + I E+ GSL + +NY+ + + + L V RG+ Y+H +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS- 133
Query: 498 PIVHRDLKSSNLLVDK--------------NWTVKVGDFGLSSLKNATYLTA-KSGRGTP 542
+VH D+K SN+ + + +W F + L + T +++ + G
Sbjct: 134 -LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 192
Query: 543 QWMAPEVLRSEPSN-EKSDVFSFGVIL 568
+++A EVL+ ++ K+D+F+ + +
Sbjct: 193 RFLANEVLQENYTHLPKADIFALALTV 219
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 384 EEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKL-RHPNVLLF 440
E+IG G + V++ + + + + G++ +N +E+ L +H +V+ +
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA---LDVARGMNYLHHRNP 497
A A + + I E+ GSL + +NY+ + + + L V RG+ Y+H +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS- 133
Query: 498 PIVHRDLKSSNLLVDK--------------NWTVKVGDFGLSSLKNATYLTA-KSGRGTP 542
+VH D+K SN+ + + +W F + L + T +++ + G
Sbjct: 134 -LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 192
Query: 543 QWMAPEVLRSEPSN-EKSDVFSFGVIL 568
+++A EVL+ ++ K+D+F+ + +
Sbjct: 193 RFLANEVLQENYTHLPKADIFALALTV 219
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 384 EEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKL-RHPNVLLF 440
E+IG G + V++ + + + + G++ +N +E+ L +H +V+ +
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA---LDVARGMNYLHHRNP 497
A A + + I E+ GSL + +NY+ + + + L V RG+ Y+H +
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS- 135
Query: 498 PIVHRDLKSSNLLVDK--------------NWTVKVGDFGLSSLKNATYLTA-KSGRGTP 542
+VH D+K SN+ + + +W F + L + T +++ + G
Sbjct: 136 -LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 194
Query: 543 QWMAPEVLRSEPSN-EKSDVFSFGVIL 568
+++A EVL+ ++ K+D+F+ + +
Sbjct: 195 RFLANEVLQENYTHLPKADIFALALTV 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 39/208 (18%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEG-TLKNYQKEIDIIKKLRHPNVLLFM- 441
IG GS+ VVY+ +G VA+K + ++G KN +E+ I++KL H N++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK-----KVLQGKAFKN--RELQIMRKLDHCNIVRLRY 80
Query: 442 -----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHH 494
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 495 RNPPIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQ--------WM 545
I HRD+K NLL+D + V K+ DFG S K RG P +
Sbjct: 141 FG--ICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLV-------RGEPNVSXICSRYYR 189
Query: 546 APEVLRSEPSNEKS-DVFSFGVILWELV 572
APE++ S DV+S G +L EL+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 93
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQ--------WMA 546
I HRD+K NLL+D + V K+ DFG +A L RG P + A
Sbjct: 154 G--ICHRDIKPQNLLLDPDTAVLKLCDFG-----SAKQLV----RGEPNVSXICSRYYRA 202
Query: 547 PEVLRSEPSNEKS-DVFSFGVILWELV 572
PE++ S DV+S G +L EL+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 89
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 149
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQ--------WMA 546
I HRD+K NLL+D + V K+ DFG +A L RG P + A
Sbjct: 150 G--ICHRDIKPQNLLLDPDTAVLKLCDFG-----SAKQLV----RGEPNVSXICSRYYRA 198
Query: 547 PEVLRSEPSNEKS-DVFSFGVILWELV 572
PE++ S DV+S G +L EL+
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 36/242 (14%)
Query: 383 GEEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTLKNYQ--KEIDIIKKLRHPNVLLF 440
G ++G G+Y VY+ D + + IEGT + +EI ++++L+HPNV+
Sbjct: 26 GCKVGRGTYGHVYKA--KRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISL 83
Query: 441 MGAVASQ--ERLGIVTEFLPRG-----SLFKTLHKNYQALDIKRRLRMAL--DVARGMNY 491
S ++ ++ ++ + N + + + R + +L + G++Y
Sbjct: 84 QKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 143
Query: 492 LHHRNPPIVHRDLKSSNLLV----DKNWTVKVGDFGLSSLKNATY--LTAKSGRGTPQWM 545
LH ++HRDLK +N+LV + VK+ D G + L N+ L W
Sbjct: 144 LHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 546 -APEVLRSEPSNEKS-DVFSFGVILWELVTA-------------SIPWNNLNLMQVVGVV 590
APE+L K+ D+++ G I EL+T+ S P+++ L ++ V+
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 261
Query: 591 GF 592
GF
Sbjct: 262 GF 263
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 384 EEIGLGSYAVVYRGIWNGSDVAVKVYFGSEYIEGTL--KNYQKEIDIIKKL-RHPNVLLF 440
E+IG G + V++ + + + + G++ +N +E+ L +H +V+ +
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 441 MGAVASQERLGIVTEFLPRGSLFKTLHKNYQALDIKRRLRMA---LDVARGMNYLHHRNP 497
A A + + I E+ GSL + +NY+ + + + L V RG+ Y+H +
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS- 131
Query: 498 PIVHRDLKSSNLLVDK--------------NWTVKVGDFGLSSLKNATYLTA-KSGRGTP 542
+VH D+K SN+ + + +W F + L + T +++ + G
Sbjct: 132 -LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 190
Query: 543 QWMAPEVLRSEPSN-EKSDVFSFGVIL 568
+++A EVL+ ++ K+D+F+ + +
Sbjct: 191 RFLANEVLQENYTHLPKADIFALALTV 217
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 93
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQ--------WMA 546
I HRD+K NLL+D + V K+ DFG +A L RG P + A
Sbjct: 154 G--ICHRDIKPQNLLLDPDTAVLKLCDFG-----SAKQLV----RGEPNVSXICSRYYRA 202
Query: 547 PEVLRSEPSNEKS-DVFSFGVILWELV 572
PE++ S DV+S G +L EL+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 100
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 160
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQ--------WMA 546
I HRD+K NLL+D + V K+ DFG +A L RG P + A
Sbjct: 161 G--ICHRDIKPQNLLLDPDTAVLKLCDFG-----SAKQLV----RGEPNVSXICSRYYRA 209
Query: 547 PEVLRSEPSNEKS-DVFSFGVILWELV 572
PE++ S DV+S G +L EL+
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 56/247 (22%)
Query: 381 QLGEEIGLGSYAVVYRGI--------------------W----NGSDVAVKVYFGSEYIE 416
Q+G +G G + VY GI W NG+ V ++V +
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 417 GTLKNYQKEIDIIKKLRHPN--VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY--QA 472
G + I ++ P+ VL+ Q+ +TE RG+L + L +++ Q
Sbjct: 100 G----FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQV 152
Query: 473 LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN-WTVKVGDFGLSSLKNAT 531
L+ R H N ++HRD+K N+L+D N +K+ DFG +L T
Sbjct: 153 LEAVR---------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
T GT + PE +R + +S V+S G++L+++V IP+ + +++G
Sbjct: 198 VYTDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--EIIGGQ 253
Query: 591 GFMDRRL 597
F +R+
Sbjct: 254 VFFRQRV 260
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 56/247 (22%)
Query: 381 QLGEEIGLGSYAVVYRGI--------------------W----NGSDVAVKVYFGSEYIE 416
Q+G +G G + VY GI W NG+ V ++V +
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 417 GTLKNYQKEIDIIKKLRHPN--VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY--QA 472
G + I ++ P+ VL+ Q+ +TE RG+L + L +++ Q
Sbjct: 100 G----FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQV 152
Query: 473 LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN-WTVKVGDFGLSSLKNAT 531
L+ R H N ++HRD+K N+L+D N +K+ DFG +L T
Sbjct: 153 LEAVR---------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
T GT + PE +R + +S V+S G++L+++V IP+ + +++G
Sbjct: 198 VYTDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--EIIGGQ 253
Query: 591 GFMDRRL 597
F +R+
Sbjct: 254 VFFRQRV 260
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 56/247 (22%)
Query: 381 QLGEEIGLGSYAVVYRGI--------------------W----NGSDVAVKVYFGSEYIE 416
Q+G +G G + VY GI W NG+ V ++V +
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 417 GTLKNYQKEIDIIKKLRHPN--VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY--QA 472
G + I ++ P+ VL+ Q+ +TE RG+L + L +++ Q
Sbjct: 99 G----FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQV 151
Query: 473 LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN-WTVKVGDFGLSSLKNAT 531
L+ R H N ++HRD+K N+L+D N +K+ DFG +L T
Sbjct: 152 LEAVR---------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
T GT + PE +R + +S V+S G++L+++V IP+ + +++G
Sbjct: 197 VYTDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--EIIGGQ 252
Query: 591 GFMDRRL 597
F +R+
Sbjct: 253 VFFRQRV 259
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 56/247 (22%)
Query: 381 QLGEEIGLGSYAVVYRGI--------------------W----NGSDVAVKVYFGSEYIE 416
Q+G +G G + VY GI W NG+ V ++V +
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 417 GTLKNYQKEIDIIKKLRHPN--VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY--QA 472
G + I ++ P+ VL+ Q+ +TE RG+L + L +++ Q
Sbjct: 100 G----FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQV 152
Query: 473 LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN-WTVKVGDFGLSSLKNAT 531
L+ R H N ++HRD+K N+L+D N +K+ DFG +L T
Sbjct: 153 LEAVR---------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
T GT + PE +R + +S V+S G++L+++V IP+ + +++G
Sbjct: 198 VYTDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--EIIGGQ 253
Query: 591 GFMDRRL 597
F +R+
Sbjct: 254 VFFRQRV 260
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 81
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQ--------WMA 546
I HRD+K NLL+D + V K+ DFG +A L RG P + A
Sbjct: 142 G--ICHRDIKPQNLLLDPDTAVLKLCDFG-----SAKQLV----RGEPNVSXICSRYYRA 190
Query: 547 PEVLRSEPSNEKS-DVFSFGVILWELV 572
PE++ S DV+S G +L EL+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 56/247 (22%)
Query: 381 QLGEEIGLGSYAVVYRGI--------------------W----NGSDVAVKVYFGSEYIE 416
Q+G +G G + VY GI W NG+ V ++V +
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 417 GTLKNYQKEIDIIKKLRHPN--VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY--QA 472
G + I ++ P+ VL+ Q+ +TE RG+L + L +++ Q
Sbjct: 99 G----FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQV 151
Query: 473 LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN-WTVKVGDFGLSSLKNAT 531
L+ R H N ++HRD+K N+L+D N +K+ DFG +L T
Sbjct: 152 LEAVR---------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
T GT + PE +R + +S V+S G++L+++V IP+ + +++G
Sbjct: 197 VYTDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--EIIGGQ 252
Query: 591 GFMDRRL 597
F +R+
Sbjct: 253 VFFRQRV 259
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 56/247 (22%)
Query: 381 QLGEEIGLGSYAVVYRGI--------------------W----NGSDVAVKVYFGSEYIE 416
Q+G +G G + VY GI W NG+ V ++V +
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 417 GTLKNYQKEIDIIKKLRHPN--VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY--QA 472
G + I ++ P+ VL+ Q+ +TE RG+L + L +++ Q
Sbjct: 100 G----FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQV 152
Query: 473 LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN-WTVKVGDFGLSSLKNAT 531
L+ R H N ++HRD+K N+L+D N +K+ DFG +L T
Sbjct: 153 LEAVR---------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
T GT + PE +R + +S V+S G++L+++V IP+ + +++G
Sbjct: 198 VYTDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--EIIGGQ 253
Query: 591 GFMDRRL 597
F +R+
Sbjct: 254 VFFRQRV 260
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 54/230 (23%)
Query: 381 QLGEEIGLGSYAVVYRGI--------------------W----NGSDVAVKVYFGSEYIE 416
Q+G +G G + VY GI W NG+ V ++V +
Sbjct: 46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 105
Query: 417 GTLKNYQKEIDIIKKLRHPN--VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY--QA 472
G + I ++ P+ VL+ Q+ +TE RG+L + L +++ Q
Sbjct: 106 G----FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQV 158
Query: 473 LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN-WTVKVGDFGLSSLKNAT 531
L+ R H N ++HRD+K N+L+D N +K+ DFG +L T
Sbjct: 159 LEAVR---------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 203
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPWNN 580
T GT + PE +R + +S V+S G++L+++V IP+ +
Sbjct: 204 VYTDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 81
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQ--------WMA 546
I HRD+K NLL+D + V K+ DFG +A L RG P + A
Sbjct: 142 G--ICHRDIKPQNLLLDPDTAVLKLCDFG-----SAKQLV----RGEPNVSXICSRYYRA 190
Query: 547 PEVLRSEPSNEKS-DVFSFGVILWELV 572
PE++ S DV+S G +L EL+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 85
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 145
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQ--------WMA 546
I HRD+K NLL+D + V K+ DFG +A L RG P + A
Sbjct: 146 G--ICHRDIKPQNLLLDPDTAVLKLCDFG-----SAKQLV----RGEPNVSXICSRYYRA 194
Query: 547 PEVLRSEPSNEKS-DVFSFGVILWELV 572
PE++ S DV+S G +L EL+
Sbjct: 195 PELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 54/230 (23%)
Query: 381 QLGEEIGLGSYAVVYRGI--------------------W----NGSDVAVKVYFGSEYIE 416
Q+G +G G + VY GI W NG+ V ++V +
Sbjct: 59 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 118
Query: 417 GTLKNYQKEIDIIKKLRHPN--VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY--QA 472
G + I ++ P+ VL+ Q+ +TE RG+L + L +++ Q
Sbjct: 119 G----FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQV 171
Query: 473 LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN-WTVKVGDFGLSSLKNAT 531
L+ R H N ++HRD+K N+L+D N +K+ DFG +L T
Sbjct: 172 LEAVR---------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 216
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPWNN 580
T GT + PE +R + +S V+S G++L+++V IP+ +
Sbjct: 217 VYTDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 264
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 56/247 (22%)
Query: 381 QLGEEIGLGSYAVVYRGI--------------------W----NGSDVAVKVYFGSEYIE 416
Q+G +G G + VY GI W NG+ V ++V +
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 417 GTLKNYQKEIDIIKKLRHPN--VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY--QA 472
G + I ++ P+ VL+ Q+ +TE RG+L + L +++ Q
Sbjct: 99 G----FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQV 151
Query: 473 LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN-WTVKVGDFGLSSLKNAT 531
L+ R H N ++HRD+K N+L+D N +K+ DFG +L T
Sbjct: 152 LEAVR---------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPWNNLNLMQVVGVV 590
T GT + PE +R + +S V+S G++L+++V IP+ + +++G
Sbjct: 197 VYTDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--EIIGGQ 252
Query: 591 GFMDRRL 597
F +R+
Sbjct: 253 VFFRQRV 259
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 386 IGLGSYAVVYRGIW--NGSDVAVKVYFGSEYIEGTLKNYQKEIDIIKKLRHPNVLLFM-- 441
IG GS+ VVY+ +G VA+K + KN +E+ I++KL H N++
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKN--RELQIMRKLDHCNIVRLRYF 82
Query: 442 ----GAVASQERLGIVTEFLPRGSLFKTLH--KNYQALDIKRRLRMALDVARGMNYLHHR 495
G + L +V +++P H + Q L + + R + Y+H
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 142
Query: 496 NPPIVHRDLKSSNLLVDKNWTV-KVGDFGLSSLKNATYLTAKSGRGTPQ--------WMA 546
I HRD+K NLL+D + V K+ DFG +A L RG P + A
Sbjct: 143 G--ICHRDIKPQNLLLDPDTAVLKLCDFG-----SAKQLV----RGEPNVSXICSRYYRA 191
Query: 547 PEVLRSEPSNEKS-DVFSFGVILWELV 572
PE++ S DV+S G +L EL+
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 54/230 (23%)
Query: 381 QLGEEIGLGSYAVVYRGI--------------------W----NGSDVAVKVYFGSEYIE 416
Q+G +G G + VY GI W NG+ V ++V +
Sbjct: 27 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 417 GTLKNYQKEIDIIKKLRHPN--VLLFMGAVASQERLGIVTEFLPRGSLFKTLHKNY--QA 472
G + I ++ P+ VL+ Q+ +TE RG+L + L +++ Q
Sbjct: 87 G----FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQV 139
Query: 473 LDIKRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKN-WTVKVGDFGLSSLKNAT 531
L+ R H N ++HRD+K N+L+D N +K+ DFG +L T
Sbjct: 140 LEAVR---------------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 532 YLTAKSGRGTPQWMAPEVLRSEPSNEKS-DVFSFGVILWELVTASIPWNN 580
T GT + PE +R + +S V+S G++L+++V IP+ +
Sbjct: 185 VYTDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,598,345
Number of Sequences: 62578
Number of extensions: 782541
Number of successful extensions: 4496
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 1774
Number of HSP's gapped (non-prelim): 1130
length of query: 605
length of database: 14,973,337
effective HSP length: 104
effective length of query: 501
effective length of database: 8,465,225
effective search space: 4241077725
effective search space used: 4241077725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)