BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038216
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93447|EF1D_PIMBR Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3
Length = 226
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 101/120 (84%), Positives = 114/120 (95%)
Query: 13 LFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDIKPWNDETDMQKLEEAVRSIKME 72
LFGEETEE+KKA+EER+AA+KAS K+KESGKSSVLLD+KPW+DETDM KLEEAVRSIKM+
Sbjct: 107 LFGEETEEEKKASEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMD 166
Query: 73 GLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
GL WGASKLV VGYGIKKLQIMLTIVDDLVSVD+L+E++L AEP NEY+QSCDIVAFNKI
Sbjct: 167 GLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226
>sp|Q84WM9|EF1B1_ARATH Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110
PE=2 SV=2
Length = 228
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/120 (78%), Positives = 108/120 (90%)
Query: 13 LFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDIKPWNDETDMQKLEEAVRSIKME 72
LF +ETE++KKAAEER AA K + K KESGKSSVLL++KPW+DETDM+KLEEAVRS++M
Sbjct: 109 LFADETEDEKKAAEEREAAKKDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMP 168
Query: 73 GLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
GL WGASKLVPVGYGIKKL IM+TIVDDLVSVDNLIE+HL +EP NEY+QS DIVAFNKI
Sbjct: 169 GLTWGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228
>sp|Q9SI20|EF1D2_ARATH Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110
PE=2 SV=1
Length = 231
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/120 (84%), Positives = 112/120 (93%)
Query: 13 LFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDIKPWNDETDMQKLEEAVRSIKME 72
LFGEETEE+KKAAEER+A++KAS K+KESGKSSVL+DIKPW+DETDM+KLEEAVRSI+ME
Sbjct: 112 LFGEETEEEKKAAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQME 171
Query: 73 GLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
GL WGASKLVPVGYGIKKL IM TIVDDLVS+D +IEE L EPINEYVQSCDIVAFNKI
Sbjct: 172 GLFWGASKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
>sp|P29545|EF1B_ORYSJ Elongation factor 1-beta OS=Oryza sativa subsp. japonica
GN=Os07g0662500 PE=1 SV=3
Length = 224
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/120 (80%), Positives = 111/120 (92%), Gaps = 1/120 (0%)
Query: 13 LFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDIKPWNDETDMQKLEEAVRSIKME 72
LFG+ETEEDKKAA+ER+A+ +S K++ KSSVLLD+KPW+DETDM+KLEEAVRS++ME
Sbjct: 106 LFGDETEEDKKAADERAASKASSKKKESG-KSSVLLDVKPWDDETDMKKLEEAVRSVQME 164
Query: 73 GLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
GL WGASKLVPVGYGIKKLQIMLTIVDDLVSVD+LIEEHL EPINE+VQSCDIVAFNKI
Sbjct: 165 GLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFNKI 224
>sp|P48006|EF1D1_ARATH Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230
PE=2 SV=2
Length = 231
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/120 (83%), Positives = 113/120 (94%)
Query: 13 LFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDIKPWNDETDMQKLEEAVRSIKME 72
LFGEETEE+KKAAEER+A++KAS K+KESGKSSVL+DIKPW+DETDM+KLEEAV+SI+ME
Sbjct: 112 LFGEETEEEKKAAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQME 171
Query: 73 GLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
GL WGASKLVPVGYGIKKLQI+ TIVDDLVS+D +IEE L EPINEYVQSCDIVAFNKI
Sbjct: 172 GLFWGASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
>sp|Q40680|EF1D1_ORYSJ Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica
GN=Os07g0614500 PE=2 SV=3
Length = 229
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/120 (83%), Positives = 113/120 (94%)
Query: 13 LFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDIKPWNDETDMQKLEEAVRSIKME 72
LFGEETEE+KKAAEER+AA+KAS K+KESGKSSVLLD+KPW+DETDM KLEEAVR++KME
Sbjct: 110 LFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKME 169
Query: 73 GLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
GL WGASKLVPVGYGIKKLQIM+TIVDDLVSVD+LIE++ EP NEY+QSCDIVAFNKI
Sbjct: 170 GLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229
>sp|Q40682|EF1D2_ORYSJ Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica
GN=Os03g0406200 PE=2 SV=3
Length = 226
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/120 (82%), Positives = 113/120 (94%)
Query: 13 LFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDIKPWNDETDMQKLEEAVRSIKME 72
LFGEETEE+KKAAEER+AA+KAS K+KESGKSSVLLD+KPW+DETDM KLEEAVR++KME
Sbjct: 107 LFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKME 166
Query: 73 GLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
GL WGASKLVPVGYGIKKLQIM+TIVDDLVSVD+LIE++ EP NE++QSCDIVAFNKI
Sbjct: 167 GLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 226
>sp|Q9SCX3|EF1B2_ARATH Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510
PE=1 SV=1
Length = 224
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/122 (77%), Positives = 108/122 (88%)
Query: 11 VDLFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDIKPWNDETDMQKLEEAVRSIK 70
+DLFG+ETEE+KKAAEER AA K + K KESGKSSVL+D+KPW+DETDM+KLEEAVR ++
Sbjct: 103 MDLFGDETEEEKKAAEEREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVE 162
Query: 71 MEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFN 130
M GL WGASKLVPVGYGIKKL IM TIVDDLVS DNLIE+ L +EP NEY+QSCDIVAFN
Sbjct: 163 MPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFN 222
Query: 131 KI 132
KI
Sbjct: 223 KI 224
>sp|O81918|EF1D_BETVU Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3
Length = 231
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 78/92 (84%), Positives = 86/92 (93%)
Query: 41 SGKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDD 100
SGKSSVLLD+KPW+DETDM+KLEEAVRS++ EGL GASKLVPVGYGIKKL IM+TIVDD
Sbjct: 140 SGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDD 199
Query: 101 LVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
LVSVDNLIE++L EPINEYVQSCDIVAFNKI
Sbjct: 200 LVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231
>sp|P29546|EF1B_WHEAT Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2
Length = 216
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/116 (79%), Positives = 100/116 (86%), Gaps = 4/116 (3%)
Query: 17 ETEEDKKAAEERSAAIKASAKRKESGKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHW 76
ETEEDKKAA ER AA AK+KESGKSSVL+DIKPW+DETDM+KLEEAVRS++MEGL W
Sbjct: 105 ETEEDKKAAAEREAA--KPAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLTW 162
Query: 77 GASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
GASKL+PVGYGIKKLQIMLTI+DDL S IEE L PINEYVQSCDIVAFNKI
Sbjct: 163 GASKLMPVGYGIKKLQIMLTIIDDLASTP--IEEVLCEAPINEYVQSCDIVAFNKI 216
>sp|P32192|EF1D_ARTSA Elongation factor 1-delta OS=Artemia salina PE=1 SV=2
Length = 237
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 94/132 (71%), Gaps = 7/132 (5%)
Query: 5 DDDNDDVDLFG--EETEEDKKAAEERSAAIKASAKRKES--GKSSVLLDIKPWNDETDMQ 60
++++DDVDLFG EE+EE +K ER AA +A K + KSS+LLDIKPW+DETDM
Sbjct: 109 EEEDDDVDLFGSDEESEEAEKVKAERIAAYQAKKSHKPTVIAKSSILLDIKPWDDETDMG 168
Query: 61 KLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEY 120
+E VRSI M+GL WGASKLVPV +G+KKLQI + DD VSVD L+E+ E +Y
Sbjct: 169 AMEREVRSIAMDGLIWGASKLVPVAFGVKKLQISCVVEDDKVSVDELVEK---IEAFEDY 225
Query: 121 VQSCDIVAFNKI 132
VQS DI AFNKI
Sbjct: 226 VQSVDIAAFNKI 237
>sp|P30151|EF1B_XENLA Elongation factor 1-beta OS=Xenopus laevis GN=eef1b PE=1 SV=3
Length = 227
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 98/134 (73%), Gaps = 9/134 (6%)
Query: 5 DDDNDDVDLFG----EETEEDKKAAEERSAAIKASAKRKES--GKSSVLLDIKPWNDETD 58
++D+DD+DLFG EE+E+ K+ +ER A +A +K + KSS+LLD+KPW+DETD
Sbjct: 97 EEDDDDIDLFGSDDEEESEDAKRVRDERLAQYEAKKSKKPTLIAKSSILLDVKPWDDETD 156
Query: 59 MQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPIN 118
M KLEE +RSI+M+GL WG+SKLVPVGYGIKKLQI + DD V D ++EE + A
Sbjct: 157 MGKLEECLRSIQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD-VLEEKITA--FE 213
Query: 119 EYVQSCDIVAFNKI 132
++VQS D+ AFNKI
Sbjct: 214 DFVQSMDVAAFNKI 227
>sp|A5D989|EF1D_BOVIN Elongation factor 1-delta OS=Bos taurus GN=EEF1D PE=2 SV=2
Length = 280
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 87/127 (68%), Gaps = 8/127 (6%)
Query: 11 VDLFGEETEEDKKAAEERSAAIKASAKRKES-----GKSSVLLDIKPWNDETDMQKLEEA 65
+DLFG + EEDK+A R ++ A++K KSS+LLD+KPW+DETDM +LE
Sbjct: 157 IDLFGSDEEEDKEATRLREERLRQYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEAC 216
Query: 66 VRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCD 125
VRS++++GL WG+SKLVPVGYGI+KLQI + DD V D L EE E E+VQS D
Sbjct: 217 VRSVQLDGLVWGSSKLVPVGYGIRKLQIQCVVEDDKVGTDQLEEEITKFE---EHVQSVD 273
Query: 126 IVAFNKI 132
I AFNKI
Sbjct: 274 IAAFNKI 280
>sp|P53787|EF1D_RABIT Elongation factor 1-delta OS=Oryctolagus cuniculus GN=EEF1D PE=2
SV=1
Length = 280
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 87/125 (69%), Gaps = 8/125 (6%)
Query: 13 LFGEETEEDKKAAEERSAAIKASAKRKES-----GKSSVLLDIKPWNDETDMQKLEEAVR 67
LFG + EEDK+AA R ++ A++K KSS+LLD+KPW+DETDM +LE VR
Sbjct: 159 LFGSDEEEDKEAARLREERLRQYAEKKARKPALVAKSSILLDVKPWDDETDMARLEACVR 218
Query: 68 SIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIV 127
S++++GL WGASKLVPVGYGI+KLQI + DD V D L+EE + E+VQS DI
Sbjct: 219 SVQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDIA 275
Query: 128 AFNKI 132
AFNKI
Sbjct: 276 AFNKI 280
>sp|P29693|EF1D_XENLA Elongation factor 1-delta OS=Xenopus laevis GN=eef1d PE=1 SV=1
Length = 265
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 86/126 (68%), Gaps = 9/126 (7%)
Query: 13 LFGEETEE-DKKAAEERSAAIKASAKRKES-----GKSSVLLDIKPWNDETDMQKLEEAV 66
LFG + EE D +AA R +K A++K KSS+LLD+KPW+DETDM KLEE V
Sbjct: 143 LFGSDNEEEDAEAARIREERLKQYAEKKSKKPGVIAKSSILLDVKPWDDETDMAKLEECV 202
Query: 67 RSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDI 126
R+++M+GL WG+SKLVPVGYGIKKLQI + DD V D L EE E +YVQS DI
Sbjct: 203 RTVQMDGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFE---DYVQSVDI 259
Query: 127 VAFNKI 132
AFNKI
Sbjct: 260 AAFNKI 265
>sp|P12262|EF1B_ARTSA Elongation factor 1-beta OS=Artemia salina PE=1 SV=3
Length = 207
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 97/136 (71%), Gaps = 7/136 (5%)
Query: 1 AAAADDDNDDVDLFG--EETEEDKKAAEERSAAI--KASAKRKESGKSSVLLDIKPWNDE 56
+A+ +++DDVDLFG EE EE +K ER A K S K KSSV+LDIKPW+DE
Sbjct: 75 TSASKEEDDDVDLFGSDEEDEEAEKIKAERMKAYSDKKSKKPAIVAKSSVILDIKPWDDE 134
Query: 57 TDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEP 116
TDM ++E+ VRS++M+GL WGA+KL+P+ YGIKKL IM + DD VS+D L E+ ++E
Sbjct: 135 TDMAEMEKLVRSVQMDGLVWGAAKLIPLAYGIKKLSIMCVVEDDKVSIDELQEK--ISE- 191
Query: 117 INEYVQSCDIVAFNKI 132
++VQS DI AFNK+
Sbjct: 192 FEDFVQSVDIAAFNKV 207
>sp|Q6DET9|EF1B_XENTR Elongation factor 1-beta OS=Xenopus tropicalis GN=eef1b PE=2 SV=3
Length = 228
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 89/126 (70%), Gaps = 9/126 (7%)
Query: 13 LFGEE----TEEDKKAAEERSAAIKASAKRKES--GKSSVLLDIKPWNDETDMQKLEEAV 66
LFG + EE K+ EER A +A +K + KSS+LLD+KPW+DETDM KLEE V
Sbjct: 106 LFGSDDEEENEESKRVREERLAQYEAKKSKKPALIAKSSILLDVKPWDDETDMAKLEECV 165
Query: 67 RSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDI 126
RSI+MEGL WGASKLVPVGYGIKKLQI + DD V D ++EE++ A ++VQS D+
Sbjct: 166 RSIQMEGLVWGASKLVPVGYGIKKLQIQCVVEDDKVGTD-VLEENITA--FEDFVQSMDV 222
Query: 127 VAFNKI 132
AFNKI
Sbjct: 223 AAFNKI 228
>sp|Q4R3D4|EF1D_MACFA Elongation factor 1-delta OS=Macaca fascicularis GN=EEF1D PE=2 SV=2
Length = 281
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 88/126 (69%), Gaps = 9/126 (7%)
Query: 13 LFGEETEE-DKKAAEERSAAIKASAKRKES-----GKSSVLLDIKPWNDETDMQKLEEAV 66
LFG + EE DK+AA+ R ++ A++K KSS+LLD+KPW+DETDM +LE V
Sbjct: 159 LFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACV 218
Query: 67 RSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDI 126
RSI+++GL WGASKLVPVGYGI+KLQI + DD V D L+EE + E+VQS DI
Sbjct: 219 RSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDI 275
Query: 127 VAFNKI 132
AFNKI
Sbjct: 276 AAFNKI 281
>sp|P29692|EF1D_HUMAN Elongation factor 1-delta OS=Homo sapiens GN=EEF1D PE=1 SV=5
Length = 281
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 88/126 (69%), Gaps = 9/126 (7%)
Query: 13 LFGEETEE-DKKAAEERSAAIKASAKRKES-----GKSSVLLDIKPWNDETDMQKLEEAV 66
LFG + EE DK+AA+ R ++ A++K KSS+LLD+KPW+DETDM +LE V
Sbjct: 159 LFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACV 218
Query: 67 RSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDI 126
RSI+++GL WGASKLVPVGYGI+KLQI + DD V D L+EE + E+VQS DI
Sbjct: 219 RSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDI 275
Query: 127 VAFNKI 132
AFNKI
Sbjct: 276 AAFNKI 281
>sp|Q68FR9|EF1D_RAT Elongation factor 1-delta OS=Rattus norvegicus GN=Eef1d PE=1 SV=2
Length = 281
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 92/136 (67%), Gaps = 9/136 (6%)
Query: 3 AADDDNDDVDLFGE----ETEEDKKAAEE--RSAAIKASAKRKESGKSSVLLDIKPWNDE 56
A DD+++D+DLFG E +E + EE R A K + K KSS+LLD+KPW+DE
Sbjct: 149 AEDDEDNDIDLFGSDEEEEDKEAARLREERLRQYAEKKAKKPTLVAKSSILLDVKPWDDE 208
Query: 57 TDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEP 116
TDM +LE VRSI+++GL WGASKLVPVGYGI+KLQI + DD V D L+EE +
Sbjct: 209 TDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK-- 265
Query: 117 INEYVQSCDIVAFNKI 132
E+VQS DI AFNKI
Sbjct: 266 FEEHVQSVDIAAFNKI 281
>sp|Q5E983|EF1B_BOVIN Elongation factor 1-beta OS=Bos taurus GN=EEF1B PE=2 SV=3
Length = 225
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 82/113 (72%), Gaps = 5/113 (4%)
Query: 22 KKAAEERSAAIKASAKRKES--GKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGAS 79
K+ EER A ++ +K + KSS+LLD+KPW+DETDM KLEE VRSI+ +GL WG+S
Sbjct: 116 KRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSS 175
Query: 80 KLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
KLVPVGYGIKKLQI + DD V D ++EE + A +EYVQS D+ AFNKI
Sbjct: 176 KLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQITA--FDEYVQSMDVAAFNKI 225
>sp|P57776|EF1D_MOUSE Elongation factor 1-delta OS=Mus musculus GN=Eef1d PE=1 SV=3
Length = 281
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 9/138 (6%)
Query: 1 AAAADDDNDDVDLFGE----ETEEDKKAAEE--RSAAIKASAKRKESGKSSVLLDIKPWN 54
A DD++ D+DLFG E +E + EE R A K + K KSS+LLD+KPW+
Sbjct: 147 TPAEDDEDKDIDLFGSDEEEEDKEAARLREERLRQYAEKKAKKPTLVAKSSILLDVKPWD 206
Query: 55 DETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMA 114
DETDM +LE VRSI+++GL WGASKLVPVGYGI+KLQI + DD V D L+EE +
Sbjct: 207 DETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK 265
Query: 115 EPINEYVQSCDIVAFNKI 132
E+VQS DI AF+KI
Sbjct: 266 --FEEHVQSVDIAAFDKI 281
>sp|O70251|EF1B_MOUSE Elongation factor 1-beta OS=Mus musculus GN=Eef1b PE=1 SV=5
Length = 225
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 81/113 (71%), Gaps = 5/113 (4%)
Query: 22 KKAAEERSAAIKASAKRKES--GKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGAS 79
KK EER A ++ +K + KSS+LLD+KPW+DETDM KLEE VRSI+ +GL WG+S
Sbjct: 116 KKLREERLAQYESKKAKKPAVVAKSSILLDVKPWDDETDMTKLEECVRSIQADGLVWGSS 175
Query: 80 KLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
KLVPVGYGIKKLQI + DD V D ++EE + A +YVQS D+ AFNKI
Sbjct: 176 KLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQITA--FEDYVQSMDVAAFNKI 225
>sp|P24534|EF1B_HUMAN Elongation factor 1-beta OS=Homo sapiens GN=EEF1B2 PE=1 SV=3
Length = 225
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 81/113 (71%), Gaps = 5/113 (4%)
Query: 22 KKAAEERSAAIKASAKRKES--GKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGAS 79
K+ EER A ++ +K + KSS+LLD+KPW+DETDM KLEE VRSI+ +GL WG+S
Sbjct: 116 KRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSS 175
Query: 80 KLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
KLVPVGYGIKKLQI + DD V D ++EE + A +YVQS D+ AFNKI
Sbjct: 176 KLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQITA--FEDYVQSMDVAAFNKI 225
>sp|Q9YGQ1|EF1B_CHICK Elongation factor 1-beta OS=Gallus gallus GN=EEF1B PE=2 SV=3
Length = 225
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 81/113 (71%), Gaps = 5/113 (4%)
Query: 22 KKAAEERSAAIKASAKRKES--GKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGAS 79
K+ EER A ++ +K + KSS+LLD+KPW+DETDM KLEE VRSI+ +GL WG+S
Sbjct: 116 KRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSS 175
Query: 80 KLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
KLVPVGYGIKKLQI + DD V D ++EE + A +YVQS D+ AFNKI
Sbjct: 176 KLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQITA--FEDYVQSMDVAAFNKI 225
>sp|P34826|EF1B_RABIT Elongation factor 1-beta OS=Oryctolagus cuniculus GN=EEF1B PE=1
SV=2
Length = 225
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 81/113 (71%), Gaps = 5/113 (4%)
Query: 22 KKAAEERSAAIKASAKRKES--GKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGAS 79
K+ EER A ++ +K + KSS+LLD+KPW+DETDM KLEE VRSI+ +GL WG+S
Sbjct: 116 KRLREERLAQYESKKAKKPALVAKSSILLDVKPWDDETDMVKLEECVRSIQADGLVWGSS 175
Query: 80 KLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
KLVPVGYGIKKLQI + DD V D ++EE + A +YVQS D+ AFNKI
Sbjct: 176 KLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQITA--FEDYVQSMDVAAFNKI 225
>sp|P29522|EF1B2_BOMMO Elongation factor 1-beta' OS=Bombyx mori PE=1 SV=2
Length = 222
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 26 EERSAAI--KASAKRKESGKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVP 83
EER A K S K KSS+LLD+KPW+DETDM+++E VR+I+MEGL WGASKLVP
Sbjct: 117 EERLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVP 176
Query: 84 VGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
VGYGI KLQIM I DD VSVD L E+ + ++VQS DI AFNKI
Sbjct: 177 VGYGINKLQIMCVIEDDKVSVDLLTEK---IQEFEDFVQSVDIAAFNKI 222
>sp|O96827|EF1B_DROME Probable elongation factor 1-beta OS=Drosophila melanogaster
GN=Ef1beta PE=1 SV=3
Length = 222
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 73/90 (81%), Gaps = 3/90 (3%)
Query: 43 KSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLV 102
KSSVLLD+KPW+DETDM+++E VR+I+M+GL WGASKLVPVGYGI KLQIM I DD V
Sbjct: 136 KSSVLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKV 195
Query: 103 SVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
S+D L++E + E ++VQS DI AFNKI
Sbjct: 196 SID-LLQEKI--EEFEDFVQSVDIAAFNKI 222
>sp|Q717R8|EF1D_SHEEP Elongation factor 1-delta OS=Ovis aries GN=EEF1D PE=2 SV=1
Length = 277
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 84/127 (66%), Gaps = 11/127 (8%)
Query: 11 VDLFGEETEEDKKAAEERSAAIKASAKRKES-----GKSSVLLDIKPWNDETDMQKLEEA 65
+DLFG + EEDK+AA R ++ A++K KSS+LLD+KPW+DETDM +LE
Sbjct: 157 IDLFGSDEEEDKEAARLREERLRQYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEAC 216
Query: 66 VRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCD 125
VRS++++GL WG+SKLVPVGYGI+KLQI + + L H + E+VQS D
Sbjct: 217 VRSVQLDGLVWGSSKLVPVGYGIRKLQIQCVV--ECRWGRPLERSHQ----VEEHVQSVD 270
Query: 126 IVAFNKI 132
I AFNKI
Sbjct: 271 IAAFNKI 277
>sp|P34460|EF1B1_CAEEL Probable elongation factor 1-beta/1-delta 1 OS=Caenorhabditis
elegans GN=F54H12.6 PE=1 SV=1
Length = 213
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 88/127 (69%), Gaps = 8/127 (6%)
Query: 12 DLFG----EETEEDKKAAEERSAAIKASAKRKES--GKSSVLLDIKPWNDETDMQKLEEA 65
DLFG EE E K EER AA +K KSSV+LD+KPW+DETD+ ++E+
Sbjct: 89 DLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKL 148
Query: 66 VRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCD 125
VRSI+M+GL WG +KL+P+GYGIKKLQI+ I D VSVD+LIE+ + ++VQS D
Sbjct: 149 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEK--ITGDFEDHVQSVD 206
Query: 126 IVAFNKI 132
IVAFNKI
Sbjct: 207 IVAFNKI 213
>sp|Q9U2H9|EF1B2_CAEEL Probable elongation factor 1-beta/1-delta 2 OS=Caenorhabditis
elegans GN=Y41E3.10 PE=1 SV=4
Length = 263
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 73/90 (81%), Gaps = 2/90 (2%)
Query: 43 KSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLV 102
KSSV+LD+KPW+DETD+ ++E+ VRSI+M+GL WG +KL+P+GYGIKKLQI+ I D V
Sbjct: 176 KSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKV 235
Query: 103 SVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
SVD+LIE+ + ++VQS DIVAFNKI
Sbjct: 236 SVDDLIEK--ITGDFEDHVQSVDIVAFNKI 263
>sp|Q9GRF8|EF1B_DICDI Elongation factor 1-beta OS=Dictyostelium discoideum GN=efa1B PE=1
SV=1
Length = 216
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 87/127 (68%), Gaps = 8/127 (6%)
Query: 11 VDLFGEETEEDK---KAAEERSAAIKASAKRKES--GKSSVLLDIKPWNDETDMQKLEEA 65
VDLFG + E+D+ + EER K KE+ KSS+LLD+KPW+DETDM +LE+
Sbjct: 93 VDLFGSDDEDDEEYERQLEERRKKAMEHKKPKETVIAKSSILLDVKPWDDETDMVELEKC 152
Query: 66 VRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCD 125
VRSI+M+GL WGASKLV VGYGIKKL I L + D VS D L EE + + +YVQS D
Sbjct: 153 VRSIEMDGLVWGASKLVAVGYGIKKLVINLVVEDLKVSTDEL-EEKI--KDFEDYVQSVD 209
Query: 126 IVAFNKI 132
+ AFNKI
Sbjct: 210 VAAFNKI 216
>sp|O74173|EF1B_SCHPO Elongation factor 1-beta OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=tef5 PE=2 SV=1
Length = 214
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 81/127 (63%), Gaps = 8/127 (6%)
Query: 11 VDLFGEETEEDKKAAE---ERSAAIKASAKRKESG--KSSVLLDIKPWNDETDMQKLEEA 65
+DLFG + EED +A ER A K KS V LD+KPW+DET M +LE+A
Sbjct: 91 IDLFGSDEEEDPEAERIKAERVAEYNKKKAAKPKAVHKSLVTLDVKPWDDETPMDELEKA 150
Query: 66 VRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCD 125
VRSI+M+GL WG SKLVPVG+G+ K QI L + DD VS++ L EE E +YVQS D
Sbjct: 151 VRSIQMDGLVWGLSKLVPVGFGVNKFQINLVVEDDKVSLEALQEE---LEGFEDYVQSTD 207
Query: 126 IVAFNKI 132
I A +K+
Sbjct: 208 IAAMSKL 214
>sp|Q9VL18|EF1D_DROME Probable elongation factor 1-delta OS=Drosophila melanogaster
GN=eEF1delta PE=1 SV=1
Length = 256
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 82/126 (65%), Gaps = 9/126 (7%)
Query: 13 LFGEETEE-DKKAAEERSAAIKASAKRKES-----GKSSVLLDIKPWNDETDMQKLEEAV 66
LFG ++EE D +AA R + A A +K KS+++LD+KPW+DETD++ +E +
Sbjct: 134 LFGSDSEEEDGEAARIREERLAAYAAKKAKKVQIIAKSNIILDVKPWDDETDLKVMETEI 193
Query: 67 RSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDI 126
R I +GL WGASK VPV +GI+KL I + DD VS+D L EE E + ++VQS DI
Sbjct: 194 RKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSIDWLTEE---IEKLEDFVQSVDI 250
Query: 127 VAFNKI 132
AFNKI
Sbjct: 251 AAFNKI 256
>sp|P34827|EF1B_TRYCR 25 kDa elongation factor 1-beta OS=Trypanosoma cruzi PE=2 SV=1
Length = 222
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 5/129 (3%)
Query: 6 DDNDDVDLFGEETEEDKKAAEERSAAIKASAKRKES--GKSSVLLDIKPWNDETDMQKLE 63
D+++++DLFGE TEE+ A E + + K K+ KSS+L D+KPW+D D+Q L
Sbjct: 97 DEDEEIDLFGEATEEETAALEAKKKKDTDAKKAKKEVIAKSSILFDVKPWDDTVDLQALA 156
Query: 64 EAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQS 123
+ ++K +GL WG KLVPV +G+KKLQ ++ I DD V D+L EE +M+ + VQS
Sbjct: 157 NKLHAVKRDGLLWGDHKLVPVAFGVKKLQQLIVIEDDKVLSDDL-EELIMS--FEDEVQS 213
Query: 124 CDIVAFNKI 132
DIVA+NKI
Sbjct: 214 MDIVAWNKI 222
>sp|P78590|EF1B_CANAW Elongation factor 1-beta OS=Candida albicans (strain WO-1) GN=EFB1
PE=1 SV=1
Length = 213
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 44 SSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVS 103
S V LD+KPW+DETD+ +L V++I+MEGL WGA + +PVG+GIKKLQI L + D LVS
Sbjct: 128 SIVTLDVKPWDDETDLDELLTNVKAIEMEGLTWGAHQWIPVGFGIKKLQINLVVEDALVS 187
Query: 104 VDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
+D+L E ++VQS DI A K+
Sbjct: 188 LDDL---QAAVEEDEDHVQSTDIAAMQKL 213
>sp|P32471|EF1B_YEAST Elongation factor 1-beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=EFB1 PE=1 SV=4
Length = 206
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 63/89 (70%), Gaps = 3/89 (3%)
Query: 44 SSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVS 103
S V LD+KPW+DET+++++ V++I+MEGL WGA + +P+G+GIKKLQI + DD VS
Sbjct: 121 SIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVS 180
Query: 104 VDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
+D+L + E ++VQS DI A K+
Sbjct: 181 LDDLQQS---IEEDEDHVQSTDIAAMQKL 206
>sp|P29412|EF1B_PIG Elongation factor 1-beta OS=Sus scrofa GN=EEF1B PE=1 SV=1
Length = 224
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 26 EERSAAIKASAKRKES--GKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVP 83
EER A ++ +K + KS +KPW+DE M KLEE V SI+ +GL LVP
Sbjct: 119 EERLAQYESKKAKKPALVAKSXXXXXVKPWDDEXXMAKLEEXVXSIQADGLVXXXXXLVP 178
Query: 84 VGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQSCDIVAFNKI 132
VGYGIK DD V D ++EE + A +YVQS D+ AFNKI
Sbjct: 179 VGYGIKXXXXXXXXXDDKVGTD-MLEEQITA--FEDYVQSMDVAAFNKI 224
>sp|Q12WD9|EF1B_METBU Elongation factor 1-beta OS=Methanococcoides burtonii (strain DSM
6242) GN=ef1b PE=3 SV=1
Length = 89
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 42 GKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDL 101
G+ + + I P +TD+ L+ + ++ EG S++ PV +G+K L+ ++ +V DL
Sbjct: 2 GEVAATMKIMPEGVDTDLDDLKIRLEAVLPEGASIFGSEIEPVAFGLKALK-LVVLVGDL 60
Query: 102 VSVDNLIEEHLMAEPINEYVQSCDI 126
+EE A P E VQ ++
Sbjct: 61 EGGTEPVEEAFAAVPGVESVQVTEL 85
>sp|O29681|EF1B_ARCFU Elongation factor 1-beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=ef1b PE=3 SV=1
Length = 88
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 44 SSVLLDIK--PWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDL 101
SV++ I+ P + + D+ ++ E +++I+MEG+ S + P+ +G+K + +++ ++ D+
Sbjct: 2 GSVMMKIRVMPSDVDVDLNEVLEKIKNIQMEGVEIRDSAIQPIAFGLKAI-VLMAVMPDM 60
Query: 102 VSV-DNLIEE 110
+ D IEE
Sbjct: 61 EGIGDRYIEE 70
>sp|A2SR44|EF1B_METLZ Elongation factor 1-beta OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=ef1b PE=3 SV=1
Length = 86
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 42 GKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDD 100
G+ V+L I P + + D++KL+ +R+ K+ G+ K+ P+G+G+ ++I + DD
Sbjct: 2 GEVVVILKIMPESPDVDLEKLQADIRA-KVSGIE--DMKVEPIGFGLSAIKIAMITEDD 57
>sp|Q05808|VIT_ANTGR Vitellogenin OS=Anthonomus grandis GN=VTG PE=4 SV=1
Length = 1790
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 7 DNDDVDLFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDIKPWNDETDMQKLEEA 65
D DD+ E+ K ++R E+G LL+IK W + +QK E A
Sbjct: 459 DEDDIQFVAEQMYSQMKNGQQRYTWSIFRDSVAEAGTGPALLNIKKWIETKKIQKTEAA 517
>sp|Q9JKC7|AP4M1_MOUSE AP-4 complex subunit mu-1 OS=Mus musculus GN=Ap4m1 PE=2 SV=1
Length = 449
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 7 DNDDVDLFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDI 50
D V LFG ET+++K A ++ S++ +S K+ V LD+
Sbjct: 148 DLSSVGLFGAETQQNKVAPSSAASRPVLSSRSDQSQKNEVFLDV 191
>sp|Q9ZV24|OP161_ARATH Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis
thaliana GN=OEP161 PE=1 SV=1
Length = 148
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 62 LEEAVRSIKMEGLHWGASKLVPVG--YGIKKLQ 92
LE A++ + EG++WGA+ V +G YGI++++
Sbjct: 63 LEHALKKLCKEGVYWGAAGGVYIGTEYGIERIR 95
>sp|Q4JAN4|EF1B_SULAC Elongation factor 1-beta OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=ef1b PE=3 SV=2
Length = 90
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 46 VLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKL 91
V+L + P +DE ++ +L E ++ EG ++ P+ YG+K L
Sbjct: 5 VILKVFPESDEINLTQLSEEIKKRLPEGYRLVKNETEPIAYGLKAL 50
>sp|O00189|AP4M1_HUMAN AP-4 complex subunit mu-1 OS=Homo sapiens GN=AP4M1 PE=1 SV=2
Length = 453
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 7 DNDDVDLFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDI 50
D V LFG ET++ K A ++ S++ +S K+ V LD+
Sbjct: 148 DLSSVGLFGAETQQSKVAPSSAASRPVLSSRSDQSQKNEVFLDV 191
>sp|Q29RY8|AP4M1_BOVIN AP-4 complex subunit mu-1 OS=Bos taurus GN=AP4M1 PE=2 SV=1
Length = 452
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 7 DNDDVDLFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDI 50
D V LFG ET++ K A ++ S++ +S K+ V LD+
Sbjct: 148 DLSSVGLFGAETQQSKVAPSSAASRPVLSSRSDQSQKNEVFLDV 191
>sp|B8GF55|EF1B_METPE Elongation factor 1-beta OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=ef1b PE=3 SV=1
Length = 85
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 42 GKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVD 99
G +++L + P + + D++ L+ A+R+ K+ + + P+G+G+K L++M + D
Sbjct: 2 GSVALILKVMPESPDVDLEALKAAMRA-KVPSIQDIQEE--PIGFGLKALKVMAVVSD 56
>sp|Q2PWT8|AP4M1_RAT AP-4 complex subunit mu-1 OS=Rattus norvegicus GN=Ap4m1 PE=1 SV=1
Length = 453
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 7 DNDDVDLFGEETEEDKKAAEERSAAIKASAKRKESGKSSVLLDI 50
D V LFG ET++++ A ++ S++ +S K+ V LD+
Sbjct: 148 DLSSVGLFGAETQQNRVAPSSAASRPVLSSRSDQSQKNEVFLDV 191
>sp|A4YD84|EF1B_METS5 Elongation factor 1-beta OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=ef1b PE=3 SV=1
Length = 91
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 46 VLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVD 105
V+L + P DETD++K+ + S EG + P+ +G+K L + +++ +
Sbjct: 6 VVLKVFPEGDETDLEKVANELVSKLPEGYKLVRKETEPIAFGLKALVVYVSMPEKTEGGT 65
Query: 106 NLIEEHLMAEPINEYVQSCDIVAFNKI 132
+ +EE +A I E V ++V ++
Sbjct: 66 DTLEE--LASSI-EGVSHAEVVGITRL 89
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,046,484
Number of Sequences: 539616
Number of extensions: 1694822
Number of successful extensions: 8936
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 8605
Number of HSP's gapped (non-prelim): 305
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)