Query 038216
Match_columns 132
No_of_seqs 106 out of 431
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 14:53:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038216.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038216hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f60_B Elongation factor EEF1B 100.0 3.1E-41 1.1E-45 238.3 11.5 91 39-132 4-94 (94)
2 1b64_A Elongation factor 1-bet 100.0 1.5E-40 5.1E-45 233.6 10.6 90 40-132 2-91 (91)
3 1gh8_A Translation elongation 100.0 4.9E-38 1.7E-42 220.0 10.1 87 42-132 2-88 (89)
4 2yy3_A Elongation factor 1-bet 100.0 3E-37 1E-41 216.8 10.4 87 42-132 4-91 (91)
5 3bpd_A Uncharacterized protein 48.8 64 0.0022 22.3 7.6 74 46-129 9-85 (100)
6 2raq_A Conserved protein MTH88 47.5 66 0.0023 22.1 8.4 75 46-130 9-86 (97)
7 2jsx_A Protein NAPD; TAT, proo 39.5 83 0.0028 20.9 6.6 69 44-129 8-77 (95)
8 2x3d_A SSO6206; unknown functi 36.0 1E+02 0.0036 21.1 7.9 76 46-130 7-85 (96)
9 1wih_A Mitochondrial ribosome 28.8 50 0.0017 21.9 3.1 26 43-69 31-57 (84)
10 3m05_A Uncharacterized protein 25.9 1.3E+02 0.0046 20.8 5.1 48 58-111 17-65 (114)
11 3t9z_A GLNK3, nitrogen regulat 20.6 2.1E+02 0.0072 19.5 5.9 50 57-112 11-78 (118)
No 1
>1f60_B Elongation factor EEF1BA; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: d.58.12.1 PDB: 1g7c_B* 2b7c_B 2b7b_B 1ije_B* 1ijf_B*
Probab=100.00 E-value=3.1e-41 Score=238.31 Aligned_cols=91 Identities=48% Similarity=0.838 Sum_probs=88.3
Q ss_pred cccCcceeEEEeeeCCCcccHHHHHHHHHhhccCCeEEeeeEEeeeeeeeeeEEEEEEEeCCCCChhHHHHhhhcccccC
Q 038216 39 KESGKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPIN 118 (132)
Q Consensus 39 k~~~Ks~vvl~VkP~d~etDl~~L~~~Vr~i~~~Gl~wg~~k~~piafGlkkLqi~~vVeDd~v~~D~lee~~~~i~~~e 118 (132)
|+++||+++|+|||||++|||++|+++||+++|+||.||+++++||||||++||++|+|+|++||||+|+++ |+.||
T Consensus 4 k~~~ks~v~l~VkP~d~etDl~~L~~~Vr~i~~~Gl~wg~~k~~piafGlkkL~i~~vveDd~~~tD~lee~---i~~~e 80 (94)
T 1f60_B 4 KPAAKSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLDDLQQS---IEEDE 80 (94)
T ss_dssp -CCCEEEEEEEEEESSTTSCHHHHHHHHHTCCCTTEEEEEEEEEEEETTEEEEEEEEEEETTTCCHHHHHHH---HHTCT
T ss_pred CceeeEEEEEEEccCCCCcCHHHHHHHHHHhCcCCcEEEEEEEEEEeeeeEEEEEEEEEECCccChHHHHHH---HHhcc
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999 78898
Q ss_pred CCceeeEeeeeecC
Q 038216 119 EYVQSCDIVAFNKI 132 (132)
Q Consensus 119 d~VqSvdI~~fnki 132 (132)
++||||||++||||
T Consensus 81 d~VqSvdI~~~~ki 94 (94)
T 1f60_B 81 DHVQSTDIAAMQKL 94 (94)
T ss_dssp TTEEEEEEEEEEEC
T ss_pred CceeEEEEEEEEcC
Confidence 99999999999997
No 2
>1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1
Probab=100.00 E-value=1.5e-40 Score=233.60 Aligned_cols=90 Identities=63% Similarity=0.983 Sum_probs=87.9
Q ss_pred ccCcceeEEEeeeCCCcccHHHHHHHHHhhccCCeEEeeeEEeeeeeeeeeEEEEEEEeCCCCChhHHHHhhhcccccCC
Q 038216 40 ESGKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINE 119 (132)
Q Consensus 40 ~~~Ks~vvl~VkP~d~etDl~~L~~~Vr~i~~~Gl~wg~~k~~piafGlkkLqi~~vVeDd~v~~D~lee~~~~i~~~ed 119 (132)
+++||+++|+|||||++|||++|+++||+++++||.||+++++|||||||+||++|+|+|++||||+|+++ |++||+
T Consensus 2 ~~~ks~vvl~VkP~d~etDl~~L~~~Vr~i~~~Gl~wg~~k~~piafGikkL~i~~vveDd~v~tD~lee~---i~~~ed 78 (91)
T 1b64_A 2 LVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQ---ITAFED 78 (91)
T ss_dssp CSSCEEEEEEEEESSTTSCHHHHHHHHHHCCCTTCEEEEEEEEESSSSCEEEEEEEEECTTSSCHHHHHHH---HTTCTT
T ss_pred ccceEEEEEEEccCCCCcCHHHHHHHHHHhCcCCcEEEEEEEEEEEeeEEEEEEEEEEECCccChHHHHHH---HHhccC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999 889989
Q ss_pred CceeeEeeeeecC
Q 038216 120 YVQSCDIVAFNKI 132 (132)
Q Consensus 120 ~VqSvdI~~fnki 132 (132)
+||||||++||||
T Consensus 79 ~VqSvdI~~~~ki 91 (91)
T 1b64_A 79 YVQSMDVAAFNKI 91 (91)
T ss_dssp TEEEEEESCCBCC
T ss_pred ceeEEEEEEEEcC
Confidence 9999999999997
No 3
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=100.00 E-value=4.9e-38 Score=219.98 Aligned_cols=87 Identities=16% Similarity=0.322 Sum_probs=84.7
Q ss_pred CcceeEEEeeeCCCcccHHHHHHHHHhhccCCeEEeeeEEeeeeeeeeeEEEEEEEeCCCCChhHHHHhhhcccccCCCc
Q 038216 42 GKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYV 121 (132)
Q Consensus 42 ~Ks~vvl~VkP~d~etDl~~L~~~Vr~i~~~Gl~wg~~k~~piafGlkkLqi~~vVeDd~v~~D~lee~~~~i~~~ed~V 121 (132)
+||+++|+|||||++|||++|+++||+++++||.||+++++|||||||+||++|+|+|++||||+|+++ +++|++ |
T Consensus 2 ~kv~v~l~V~P~d~etDl~~L~~~vk~~~~~gl~w~~~k~~piafGlk~L~i~~vveD~~~~td~lee~---i~~~e~-V 77 (89)
T 1gh8_A 2 GDVVATIKVMPESPDVDLEALKKEIQERIPEGTELHKIDEEPIAFGLVALNVMVVVGDAEGGTEAAEES---LSGIEG-V 77 (89)
T ss_dssp CCEEEEEEEEESSSCCCHHHHHHHHHHHSCTTSEECCCCEEECSSSCEEEEEEEEESSSCGGGGHHHHH---HTTSCS-S
T ss_pred ceEEEEEEEccCCCCCCHHHHHHHHHHhccCCcEEeeeeEEEEEcceeeEEEEEEEEcCCcChHHHHHH---HhccCC-c
Confidence 689999999999999999999999999999999999999999999999999999999999999999999 888965 9
Q ss_pred eeeEeeeeecC
Q 038216 122 QSCDIVAFNKI 132 (132)
Q Consensus 122 qSvdI~~fnki 132 (132)
|||||++||||
T Consensus 78 qsvdv~~~~ri 88 (89)
T 1gh8_A 78 SNIEVTDVRRL 88 (89)
T ss_dssp EEEEEEEEEEC
T ss_pred cEEEEEEEEec
Confidence 99999999997
No 4
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=100.00 E-value=3e-37 Score=216.82 Aligned_cols=87 Identities=18% Similarity=0.321 Sum_probs=84.8
Q ss_pred CcceeEEEeeeCCCcccHHHHHHHHHhhccCCeEEeeeEEeeeeeeeeeEEEEEEEeCCCC-ChhHHHHhhhcccccCCC
Q 038216 42 GKSSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLV-SVDNLIEEHLMAEPINEY 120 (132)
Q Consensus 42 ~Ks~vvl~VkP~d~etDl~~L~~~Vr~i~~~Gl~wg~~k~~piafGlkkLqi~~vVeDd~v-~~D~lee~~~~i~~~ed~ 120 (132)
+||+++|+|||||++|||++|+++||+++++||.||+++++|||||||+||++|+|+|++| |||+|+++ |++|| +
T Consensus 4 ~kv~v~l~V~P~d~etDl~~L~~~vk~~~~~gl~w~~~k~~pIafGlk~L~i~~vveD~~~~~tD~lee~---i~~~e-~ 79 (91)
T 2yy3_A 4 FNLVGVIRVMPTDPDVNLDELEEKLKKVIPEKYGLAKVEREPIAFGLVALKFYVLGRDEEGYSFDEVAEK---FEEVE-N 79 (91)
T ss_dssp CCEEEEEEEEESSTTSCHHHHHHHHHHHSCTTCEEEEEEEEECTTSCEEEEEEEEECSSTTCCHHHHHHH---HHHST-T
T ss_pred ceEEEEEEECCCCCCCCHHHHHHHHHHhccCCcEEeeeeEEEEEcceeeEEEEEEEECCCccccHHHHHH---HhcCC-C
Confidence 7999999999999999999999999999999999999999999999999999999999999 99999999 78896 7
Q ss_pred ceeeEeeeeecC
Q 038216 121 VQSCDIVAFNKI 132 (132)
Q Consensus 121 VqSvdI~~fnki 132 (132)
||||+|++||+|
T Consensus 80 VqSvdV~~~~ri 91 (91)
T 2yy3_A 80 VESAEVETVSRI 91 (91)
T ss_dssp EEEEEEEEEEEC
T ss_pred ceEEEEEEEEcC
Confidence 999999999986
No 5
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=48.78 E-value=64 Score=22.34 Aligned_cols=74 Identities=20% Similarity=0.323 Sum_probs=49.9
Q ss_pred eEEEe-eeCCCcccHHHHHHHHHhhcc-CCeEEeeeEEeeeeeeeeeEEEEEEEeCCCCChhHHHHhhhcccccCCCcee
Q 038216 46 VLLDI-KPWNDETDMQKLEEAVRSIKM-EGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQS 123 (132)
Q Consensus 46 vvl~V-kP~d~etDl~~L~~~Vr~i~~-~Gl~wg~~k~~piafGlkkLqi~~vVeDd~v~~D~lee~~~~i~~~ed~VqS 123 (132)
++|+| || -+.++-.+...+-++.. +|.. ..+.. .-..-..+.++|+-+...-|.+++. |+.+..-|-|
T Consensus 9 lVLDVlKP--h~P~ivdlA~~l~~~~gV~gVn---ItV~E--vD~eTe~lkItIEG~dIdfd~I~~~---IE~~GgvIHS 78 (100)
T 3bpd_A 9 LVLDVLKP--HEPKTIVFALKLSELENVDGVN---IHLSE--IDQATENIKITILGNNLDYEQIKGV---IEDMGGVIHS 78 (100)
T ss_dssp EEEEEEEE--SCSCHHHHHHHHHTSTTEEEEE---EEEEE--ECSSEEEEEEEEEEEEECHHHHHHH---HHTTTCEEEE
T ss_pred EEEEecCC--CCCCHHHHHHHHHhCCCcceEE---EEEEE--eeccccEEEEEEEecCCCHHHHHHH---HHHcCCeEEe
Confidence 55665 57 77778888888776642 2322 22222 2233456777888888889999999 7888777999
Q ss_pred eE-eeee
Q 038216 124 CD-IVAF 129 (132)
Q Consensus 124 vd-I~~f 129 (132)
+| +++=
T Consensus 79 IDEVvaG 85 (100)
T 3bpd_A 79 VDEVVAG 85 (100)
T ss_dssp EEEEEEE
T ss_pred eeeeeec
Confidence 99 6543
No 6
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=47.52 E-value=66 Score=22.13 Aligned_cols=75 Identities=23% Similarity=0.340 Sum_probs=52.0
Q ss_pred eEEEee-eCCCcccHHHHHHHHHhhcc-CCeEEeeeEEeeeeeeeeeEEEEEEEeCCCCChhHHHHhhhcccccCCCcee
Q 038216 46 VLLDIK-PWNDETDMQKLEEAVRSIKM-EGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQS 123 (132)
Q Consensus 46 vvl~Vk-P~d~etDl~~L~~~Vr~i~~-~Gl~wg~~k~~piafGlkkLqi~~vVeDd~v~~D~lee~~~~i~~~ed~VqS 123 (132)
++|+|. | -+.++-.+...+-++.. +|... .+. -.-..-..+.++|+-+...-|.+++. |+.+..-|-|
T Consensus 9 lVLDVlKP--h~p~i~d~A~~l~~~~gV~gVnI---tv~--EvD~eTe~lkitiEG~~id~d~I~~~---IE~~Gg~IHS 78 (97)
T 2raq_A 9 IVLDILKP--HEPIIPEYAKYLSELRGVEGVNI---TLM--EIDKETENIKVTIQGNDLDFDEITRA---IESYGGSIHS 78 (97)
T ss_dssp EEEEEECC--SCSCHHHHHHHHHHSTTCCEEEE---EEE--EECSSCEEEEEEEECSSCCHHHHHHH---HHHTTCEEEE
T ss_pred EEEEecCC--CCCCHHHHHHHHHhCCCcceEEE---EEE--EeeccccEEEEEEEecCCCHHHHHHH---HHHcCCeEEe
Confidence 566664 5 77788888888777653 34432 222 22233456778899888999999999 7888777999
Q ss_pred eE-eeeee
Q 038216 124 CD-IVAFN 130 (132)
Q Consensus 124 vd-I~~fn 130 (132)
+| +++=.
T Consensus 79 IDEVvaG~ 86 (97)
T 2raq_A 79 VDEVVAGR 86 (97)
T ss_dssp EEEEEEES
T ss_pred eeeeeecc
Confidence 99 66533
No 7
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=39.50 E-value=83 Score=20.94 Aligned_cols=69 Identities=13% Similarity=0.217 Sum_probs=42.9
Q ss_pred ceeEEEeeeCCCcccHHHHHHHHHhhccCCeEEeeeEEeeeeee-eeeEEEEEEEeCCCCChhHHHHhhhcccccCCCce
Q 038216 44 SSVLLDIKPWNDETDMQKLEEAVRSIKMEGLHWGASKLVPVGYG-IKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQ 122 (132)
Q Consensus 44 s~vvl~VkP~d~etDl~~L~~~Vr~i~~~Gl~wg~~k~~piafG-lkkLqi~~vVeDd~v~~D~lee~~~~i~~~ed~Vq 122 (132)
|++++..+|.. ++.+.+.++.+ +|+.... .+| -- ++.++++.+ +.+++.+.+..|..+ ++|-
T Consensus 8 sslvV~~~p~~----~~~V~~~L~~i--pgvEi~~------~~~~~G--kiVV~iEa~--~~~~l~~~i~~I~~i-~GVl 70 (95)
T 2jsx_A 8 CSLVVQAKSER----ISDISTQLNAF--PGCEVAV------SDAPSG--QLIVVVEAE--DSETLIQTIESVRNV-EGVL 70 (95)
T ss_dssp EEEEEEECTTS----HHHHHHHHTTS--TTEEEEE------EETTTT--EEEEEEEES--SHHHHHHHHHHHTTS-TTEE
T ss_pred EEEEEEECCCC----HHHHHHHHHCC--CCeEEEE------ecCCCC--CEEEEEEeC--CHHHHHHHHHHHhcC-CCcc
Confidence 67888888854 55666666554 4664322 222 11 455556543 466666666668888 8999
Q ss_pred eeEeeee
Q 038216 123 SCDIVAF 129 (132)
Q Consensus 123 SvdI~~f 129 (132)
|+.++.-
T Consensus 71 st~lvy~ 77 (95)
T 2jsx_A 71 AVSLVYH 77 (95)
T ss_dssp EEEESSC
T ss_pred EEeEEEE
Confidence 9987653
No 8
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=36.04 E-value=1e+02 Score=21.10 Aligned_cols=76 Identities=21% Similarity=0.357 Sum_probs=48.0
Q ss_pred eEEEee-eCCCcccHHHHHHHHHhhcc-CCeEEeeeEEeeeeeeeeeEEEEEEEeCCCCChhHHHHhhhcccccCCCcee
Q 038216 46 VLLDIK-PWNDETDMQKLEEAVRSIKM-EGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLMAEPINEYVQS 123 (132)
Q Consensus 46 vvl~Vk-P~d~etDl~~L~~~Vr~i~~-~Gl~wg~~k~~piafGlkkLqi~~vVeDd~v~~D~lee~~~~i~~~ed~VqS 123 (132)
++|+|. |- -+.++-.+...+-++.. +|.. ..+. -.-..-..+.++|+-+...-+.+++. ++.+..-|-|
T Consensus 7 lVLDVlKP~-h~P~ivd~A~~l~~~~gV~gVn---Itv~--EvD~eTe~lkItIEG~~idfd~I~~~---IE~~Gg~IHS 77 (96)
T 2x3d_A 7 LVLDVLKPI-RGTSIVDLAERISKLDGVEGVN---ISVT--DMDVETMGLMIIIEGTSLNFDDIRKM---LEEEGCAIHS 77 (96)
T ss_dssp EEEEEEEES-SSSCHHHHHHHHHTSTTEEEEE---EEEE--EECSSEEEEEEEEEESSCCHHHHHHH---HHHTTCEEEE
T ss_pred EEEEcccCC-CCCCHHHHHHHHHhCCCcceEE---EEEE--EeeccccEEEEEEEecCCCHHHHHHH---HHHcCCeEEe
Confidence 566664 41 34556666666665542 2222 2222 22233456778899888999999999 7888777999
Q ss_pred eE-eeeee
Q 038216 124 CD-IVAFN 130 (132)
Q Consensus 124 vd-I~~fn 130 (132)
+| +++=.
T Consensus 78 IDEVvaG~ 85 (96)
T 2x3d_A 78 IDEVVSGN 85 (96)
T ss_dssp EEEEEEES
T ss_pred eeeeeecc
Confidence 99 65533
No 9
>1wih_A Mitochondrial ribosome recycling factor; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.67.3.1
Probab=28.80 E-value=50 Score=21.94 Aligned_cols=26 Identities=15% Similarity=0.059 Sum_probs=19.8
Q ss_pred cceeEEEeeeCC-CcccHHHHHHHHHhh
Q 038216 43 KSSVLLDIKPWN-DETDMQKLEEAVRSI 69 (132)
Q Consensus 43 Ks~vvl~VkP~d-~etDl~~L~~~Vr~i 69 (132)
+..=+|-|.||| + .-+..+++.|++-
T Consensus 31 ~~~r~l~I~p~D~~-~~~~~IekAI~~S 57 (84)
T 1wih_A 31 KSPQVILVNMASFP-ECTAAAIKAIRES 57 (84)
T ss_dssp EETTEEEEECTTCT-TSHHHHHHHHHTT
T ss_pred CCCCEEEEEecccH-HHHHHHHHHHHHC
Confidence 333468899988 6 8888888888865
No 10
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=25.89 E-value=1.3e+02 Score=20.82 Aligned_cols=48 Identities=15% Similarity=0.224 Sum_probs=29.0
Q ss_pred cHHHHHHHHHhhccCCeEEeeeEEeeeeee-eeeEEEEEEEeCCCCChhHHHHhh
Q 038216 58 DMQKLEEAVRSIKMEGLHWGASKLVPVGYG-IKKLQIMLTIVDDLVSVDNLIEEH 111 (132)
Q Consensus 58 Dl~~L~~~Vr~i~~~Gl~wg~~k~~piafG-lkkLqi~~vVeDd~v~~D~lee~~ 111 (132)
+++.+.+.+...-..|.+..... ||| -++..+.++|+|+. .|++.+.|
T Consensus 17 kld~V~~AL~~~G~~~t~v~~~g----Gf~r~g~~~leivV~De~--Vd~vi~~I 65 (114)
T 3m05_A 17 DANYLSDQFIDQNVRATKLSTTG----GFLQSGNTTFMIGIEEER--VPEVLEII 65 (114)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEE----TTTTEEEEEEEEEEEGGG--HHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEec----cccccCCEEEEEEEcHHH--HHHHHHHH
Confidence 45666666665544444333222 554 23788999999874 66777765
No 11
>3t9z_A GLNK3, nitrogen regulatory protein P-II (GLNB-3); PII-family, AMT3, signaling protein; HET: FLC; 1.82A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ta0_A* 3ta1_A* 3ta2_A* 3o8w_A
Probab=20.58 E-value=2.1e+02 Score=19.52 Aligned_cols=50 Identities=20% Similarity=0.397 Sum_probs=33.5
Q ss_pred ccHHHHHHHHHhhccCCeEEeeeEEeeeeee------------------eeeEEEEEEEeCCCCChhHHHHhhh
Q 038216 57 TDMQKLEEAVRSIKMEGLHWGASKLVPVGYG------------------IKKLQIMLTIVDDLVSVDNLIEEHL 112 (132)
Q Consensus 57 tDl~~L~~~Vr~i~~~Gl~wg~~k~~piafG------------------lkkLqi~~vVeDd~v~~D~lee~~~ 112 (132)
-.++.+.+.+.+.-..|+++... .||| +.+.++.++|+|+. ++.+.+.|.
T Consensus 11 ~kl~~Vk~AL~~~G~~g~Tv~~V----~G~G~qkg~~~~yrG~~~~~~~~pK~~ieivV~de~--ve~Vv~~I~ 78 (118)
T 3t9z_A 11 EKLECVKKALEERGFVGMTVTEV----KGRGEQKGIRLQFRGREVEVDLLQKTKVEVVVSDDA--VDEVVEAIV 78 (118)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEE----EEEC-----------------CEEEEEEEEEECGGG--HHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCceEEEEee----EeecCcCCCccccccceeeecccceEEEEEEEChHH--HHHHHHHHH
Confidence 45778888888877777775321 1333 34688999999875 567777653
Done!