Your job contains 1 sequence.
>038217
MAAAAIFSSLRRRRSPSLQAFLAPVDLTDVALVQTLLSISSELVSCFSDRCFFFQRRNSR
SLIRKMEAFLVLLEYLRDSGTCIESTAVLCFKELYLLLYRCKILLDYCGQSSKLWLLLQN
HSISGHFHDLNQEISTLLDVFPADDIELSEDVREQIDLMQRQARNAKLHIDKNDELLRLR
LFSFLDEFEHGRVPNHVDLRSFFVEGLGIKDAKTCRAEIEFLEEQIVNHEGDAEPTASVL
NGFVAIMRYSRFLLFGFEEDEAELGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDL
MRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALRNLIVQWCTAHGI
PYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKT
GKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIV
KVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTA
LFNLSTHTDNCVRMIEAGAVTALVGALGHEGVAEEAAGALALIVRQPIGAAAVGEEEMAV
TGLVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQALLFTGTKRARR
KAASLARVFQRCENAALHFGGLGVGYAFAGNSAANRDSSFTPDVSVPMSISVPVL
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038217
(715 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 2220 4.2e-230 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 1335 2.5e-136 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 707 1.2e-75 2
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 590 4.8e-75 3
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 564 8.5e-70 3
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 580 2.2e-69 3
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 567 3.5e-68 4
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 541 3.2e-64 4
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 571 2.6e-61 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 616 3.9e-60 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 551 2.6e-57 2
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 528 4.2e-55 2
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 341 2.5e-50 5
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 319 5.8e-45 3
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 405 2.5e-39 2
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 352 1.8e-31 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 349 3.8e-31 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 323 6.3e-29 3
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 271 2.3e-27 2
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 273 5.9e-27 2
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 306 1.7e-24 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 272 1.1e-22 3
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 281 6.1e-22 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 279 1.2e-21 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 273 1.9e-20 2
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 256 9.1e-20 2
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 260 1.6e-19 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 261 4.3e-18 2
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 178 5.8e-18 3
TAIR|locus:1005716696 - symbol:AT1G08315 species:3702 "Ar... 205 3.8e-17 2
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 158 5.3e-17 2
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 165 5.2e-16 2
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 189 1.6e-15 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 216 2.1e-15 2
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 192 5.4e-15 2
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 205 8.3e-15 3
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 215 1.5e-14 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 215 1.8e-14 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 154 2.3e-14 2
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 210 5.7e-14 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 187 7.7e-14 3
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 206 1.5e-13 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 184 6.0e-13 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 190 1.0e-11 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 171 2.0e-11 2
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 167 3.5e-11 4
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 185 3.9e-11 1
UNIPROTKB|Q6K762 - symbol:PUB73 "U-box domain-containing ... 182 1.5e-10 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 174 5.3e-10 1
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species... 176 5.5e-10 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 166 1.9e-09 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 163 1.3e-08 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 162 1.6e-08 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 165 1.8e-08 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 158 4.6e-08 1
TAIR|locus:2043709 - symbol:AT2G45720 "AT2G45720" species... 158 5.7e-08 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 156 7.3e-08 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 123 8.9e-08 2
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 155 9.3e-08 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 153 1.6e-07 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 153 1.6e-07 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 152 2.8e-07 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 149 9.4e-07 1
UNIPROTKB|H3BTA3 - symbol:STUB1 "E3 ubiquitin-protein lig... 114 9.5e-07 2
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 149 9.9e-07 1
TAIR|locus:2198235 - symbol:AT1G01830 "AT1G01830" species... 146 1.2e-06 1
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 143 1.9e-06 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 143 1.9e-06 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 141 3.7e-06 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 143 4.2e-06 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 142 5.4e-06 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 137 5.4e-06 1
TAIR|locus:2079716 - symbol:CHIP "carboxyl terminus of HS... 133 7.9e-06 1
POMBASE|SPBC354.14c - symbol:vac8 "vacuolar protein Vac8 ... 138 8.6e-06 1
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 138 9.3e-06 1
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica... 137 1.2e-05 1
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci... 137 1.2e-05 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 146 1.4e-05 2
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 124 1.6e-05 2
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 142 4.1e-05 2
WB|WBGene00000500 - symbol:chn-1 species:6239 "Caenorhabd... 124 7.3e-05 1
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi... 111 7.9e-05 2
ZFIN|ZDB-GENE-070410-21 - symbol:ube4a "ubiquitination fa... 128 0.00025 2
UNIPROTKB|F1P105 - symbol:STUB1 "STIP1 homology and U box... 118 0.00030 1
UNIPROTKB|J9NRV4 - symbol:STUB1 "Uncharacterized protein"... 116 0.00040 1
FB|FBgn0260799 - symbol:p120ctn "Adherens junction protei... 124 0.00046 1
UNIPROTKB|Q5ZHY5 - symbol:STUB1 "STIP1 homology and U box... 118 0.00051 1
TAIR|locus:2103351 - symbol:ARABIDILLO-2 "AT3G60350" spec... 128 0.00058 2
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 97 0.00059 1
UNIPROTKB|F1MUH4 - symbol:STUB1 "Uncharacterized protein"... 117 0.00061 1
FB|FBgn0027052 - symbol:CHIP "CHIP" species:7227 "Drosoph... 103 0.00062 2
WB|WBGene00002175 - symbol:jac-1 species:6239 "Caenorhabd... 125 0.00064 1
UNIPROTKB|E1B7G3 - symbol:STUB1 "Uncharacterized protein"... 117 0.00068 1
ZFIN|ZDB-GENE-030131-2963 - symbol:stub1 "STIP1 homology ... 116 0.00070 1
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 2220 (786.5 bits), Expect = 4.2e-230, P = 4.2e-230
Identities = 465/734 (63%), Positives = 537/734 (73%)
Query: 1 MAAAAIFXXXXXXXXXXXQAFLAPVDLTDVALVQTLLSISSELVSCFSDRCFFFQRRNSR 60
MA+AAIF +AFLAPVDL+ VALVQTL SISSE+VSCF+ F FQR+N+R
Sbjct: 1 MASAAIFSSLRRRRSPSLEAFLAPVDLSGVALVQTLASISSEVVSCFTSVRFSFQRKNAR 60
Query: 61 SLIRKMEAFLVLLEYLRDSG----------------TCIESTAVLCFKEXXXXXXXXXXX 104
SLIRK+E F+VL E+L DS + ESTA+LC KE
Sbjct: 61 SLIRKIEIFVVLFEFLVDSNWGSTTTRTRARRRSKSSVSESTALLCLKELYLLLYRSKIL 120
Query: 105 XXXCGQSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPADDIELSEDVREQIDLMQRQAR 164
C QSSKLWLLLQN SISG+FHDLNQEISTLLDV P +D+ LS+D+REQI+L+QRQ+R
Sbjct: 121 VDYCAQSSKLWLLLQNPSISGYFHDLNQEISTLLDVLPVNDLGLSDDIREQIELLQRQSR 180
Query: 165 NAKLHIDKNDELLRLRLFSFLDEFEHGRVPNHVDLRSFFVEGLGIKDAKTCRAEIEFLEE 224
A+L+IDKNDE LR +SFLD FE+G++P+ VDLR FFVE LGI+D+K+CR+EIEFLEE
Sbjct: 181 KARLYIDKNDESLRESFYSFLDGFENGKIPSSVDLRMFFVEKLGIRDSKSCRSEIEFLEE 240
Query: 225 QIVNHEGDAEPTASVLNGFVAIMRYSRFLLFGFEEDEAELGIGSH-KKRRKGLITQEIAE 283
QIVNH+GD EPT SV+NGFVAI RY RFLLFGFEED E I ++ KK RKG + QEI +
Sbjct: 241 QIVNHDGDLEPTGSVINGFVAITRYCRFLLFGFEEDGMEWWIENNPKKPRKGFVAQEIGD 300
Query: 284 TFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVP 343
TF+++PKDF CPI LDLM DPVIISTGQTYDR SIARW+EEGH TCPKTGQML+ R+VP
Sbjct: 301 TFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVP 360
Query: 344 NRALRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANGS 403
NRAL+NLIVQWCTA GI Y+ E TD ESFASALP++AAVEAN+AT +LI+ LA+GS
Sbjct: 361 NRALKNLIVQWCTASGISYES-EFTDSPNESFASALPTKAAVEANKATVSILIKYLADGS 419
Query: 404 PRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYD 463
A+TVAAREIRLLAKTGKENRA+IA+AGAIPHL LL++ N +AQENSVTAMLNLSIY+
Sbjct: 420 QAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYE 479
Query: 464 KNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALA 523
KNKSRIM+E CL SIV VL GLT EA+ENAAATLFSLSAVHEYKK+IA VEALA
Sbjct: 480 KNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALA 539
Query: 524 TLLRLGTPRGKKDAVTALFNLSTHTDNCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXXXX 583
LL+ GTPRGKKDAVTAL+NLSTH DNC RMIE
Sbjct: 540 LLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGVAEEAAGALALL 599
Query: 584 XRQPIXXXXXXXXXXXXTGLVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPAL 643
RQ + GL+GMMRCGTPRGKENAVAALLELCRSGGA+ E+VL+APA+
Sbjct: 600 VRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAI 659
Query: 644 VGLLQALLFTGTXXXXXXXXXXXXVFQRCENAALHFGGLGVGYAFAGNSAANRDSSFTPD 703
GLLQ LLFTGT VFQR ENAA+ G Y F GN+ NRD FT D
Sbjct: 660 AGLLQTLLFTGTKRARRKAASLARVFQRRENAAMRSGV----YGFVGNTNGNRDGGFTTD 715
Query: 704 VSVPMSIS--VPVL 715
VSVP+SIS VPVL
Sbjct: 716 VSVPISISISVPVL 729
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
Identities = 302/705 (42%), Positives = 417/705 (59%)
Query: 20 AFLAPVDLTDVALVQTLLSISSELVSCFSDRCFFFQRRNSRSLIRKMEAFLVLLE-YLRD 78
AF AP L L++ + S+++ LV+ QRRN +L R++ +LE L D
Sbjct: 30 AFFAPTGLAGATLLRAVASLAASLVAGARPPS---QRRNVDALARRLALLSAILESILLD 86
Query: 79 SGTC--IESTAVLCFKEXXXXXXXXXXXXXXCGQSSKLWLLLQNHSISGHFHDLNQEIST 136
+ A LCF+E + + W LL++ ++ F DL+ E++
Sbjct: 87 TAAAGAFSDAANLCFRELYVVLFRAELLVSYVASAGRAWALLRSPHLAASFRDLDAELAV 146
Query: 137 LLDVFPADDIELSEDVREQIDLMQRQAR---NAKLHIDKNDELLRLRLFSFLDEFEHGRV 193
+LDV PA + LS D +DL++ R A+ H D ++ LR RL L +F+ G+
Sbjct: 147 VLDVLPAASLRLSHDATGLLDLLRAHCRCRAPAQYH-DPDEAALRERLMDALRQFDLGQP 205
Query: 194 PNHVDLRSFFVEGLGIKDAKTCRAEIEFLEEQIVNHEGDAEPTASVLNGFVAIMRYSRFL 253
P+H L+S + +GI A +CRAEI++LEEQI++ E D + ++ +A++RY F
Sbjct: 206 PDHPSLQSLLAD-MGISTAASCRAEIDYLEEQILSQEEDTD--LPLVGSVLALLRYCLFA 262
Query: 254 LFGFEEDEAELGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTY 313
+F +A R++ L +T S+PK+F CPI LDLMRDPV+ STGQTY
Sbjct: 263 VFDPSNAKALRDWPLSGNRQRLLSIGGGDDTSFSVPKEFSCPISLDLMRDPVVASTGQTY 322
Query: 314 DRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALRNLIVQWCTAHGIPYDPPETTDVSAE 373
DR SI +W+EEGH TCP +GQ L RLVPNRALR+LI QWC +G+ YD PE+ + AE
Sbjct: 323 DRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALRSLISQWCGVYGLQYDSPESNEGMAE 382
Query: 374 SFASALPSRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGA 433
A++ SRAA+EAN+ATA +L++ L +GS K VAA+EIRLLAKTGK+NRAFIA GA
Sbjct: 383 CVAASCSSRAAMEANKATARILVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGA 442
Query: 434 IPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARE 493
IP L LL +++ +AQEN+VTA+LNLSI++ NK RIM++EGCL IV VL+ G TTEA+E
Sbjct: 443 IPLLCRLLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKE 502
Query: 494 NAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVR 553
NAAATLFSLS VH +KK I +E GAVE LA++L GT RGKKDAV ALFNLSTH ++ R
Sbjct: 503 NAAATLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSAR 562
Query: 554 MIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPIXXXXXXXXXXXXTGLVGMMRCGTPR 613
M+E +QP T LVG+MR GTP+
Sbjct: 563 MLESCAVVALIQSLRNDTVSEEAAGALALLMKQPSIVHLVGSSETVITSLVGLMRRGTPK 622
Query: 614 GKENAVAALLELCRSGGASATERVLKAPALVGLLQALLFTGTXXXXXXXXXXXXVFQRCE 673
GKENAV+AL E+CR GG++ +RV K P L ++Q + GT + QR +
Sbjct: 623 GKENAVSALYEICRRGGSALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRSQ 682
Query: 674 N-AALHFGGL--GVGYAFAGNSAANRDSSF-TPDVSVPMSISVPV 714
+A+ G V + GN+ R +SF + ++S P+SISV V
Sbjct: 683 MPSAMALGSTLTVVDRSLVGNNTLRRAASFGSGELSNPISISVQV 727
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 707 (253.9 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 182/517 (35%), Positives = 278/517 (53%)
Query: 34 QTLLSISSELVSCFSDRCFFFQRRNSRSLIRKMEAFLVLLEYLRDSGTCIESTAVLCFKE 93
Q+L+ + +E ++ SD ++ +L R+++ + + E +R+S I +
Sbjct: 10 QSLIDVVNE-IAAISDYRITVKKL-CYNLARRLKLLVPMFEEIRESNEPISEDTLKTLMN 67
Query: 94 XXXXXXXXXXXXXXCGQSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPADDIELSEDVR 153
C Q SK++L+++ ++ +++ ++ L P +++++S++VR
Sbjct: 68 LKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVR 127
Query: 154 EQIDLMQRQARNAKLHIDKNDELLRLRLFSFLDEFEHGRVPNHVDLRSFFVEGLGIKDAK 213
EQ++L+ Q R AK +D +D+ L L S ++ V + + + L + +
Sbjct: 128 EQVELVLSQFRRAKGRVDVSDDELYEDLQSLCNKSSD--VDAYQPVLERVAKKLHLMEIP 185
Query: 214 TCRAEIEFLEEQIVNHEGDAEPTASVLNGFVAIMRYSRFLLFGFEEDEAELGIGSHKKRR 273
E L E + + GD + +++ + + +++ E +G + R
Sbjct: 186 DLAQESVALHEMVASSGGDVGEN---IEEMAMVLKMIKDFVQTEDDNGEEQKVGVNS-RS 241
Query: 274 KGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTG 333
G + ++ IP DF CPI L++MRDPVI+S+GQTY+R I +W+E GH TCPKT
Sbjct: 242 NGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQ 301
Query: 334 QMLVHDRLVPNRALRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAE 393
Q L L PN LR+LI QWC A+ I +PP+ S+ S A EAN+ E
Sbjct: 302 QALTSTTLTPNYVLRSLIAQWCEANDI--EPPKPPSSLRPRKVSSFSSPA--EANKI--E 355
Query: 394 LLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSV 453
L+ +LA G+P + AA EIRLLAK +NR IA+AGAIP L LLST + QE+SV
Sbjct: 356 DLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSV 415
Query: 454 TAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIA 513
TA+LNLSI + NK I+ G + IV+VL+ G + EARENAAATLFSLS + E K I
Sbjct: 416 TALLNLSICENNKGAIVSA-GAIPGIVQVLKKG-SMEARENAAATLFSLSVIDENKVTIG 473
Query: 514 DESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDN 550
GA+ L LL GT RGKKDA TALFNL + N
Sbjct: 474 -ALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGN 509
Score = 150 (57.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 48/150 (32%), Positives = 76/150 (50%)
Query: 395 LIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVT 454
++Q L GS A+ AA + L+ EN+ I GAIP L LL+ ++++ T
Sbjct: 440 IVQVLKKGSMEARENAAATLFSLSVID-ENKVTIGALGAIPPLVVLLNEGTQRGKKDAAT 498
Query: 455 AMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIAD 514
A+ NL IY NK + + G + ++ ++L + E A A L LS+ H K I
Sbjct: 499 ALFNLCIYQGNKGKAI-RAGVIPTLTRLLTEPGSGMVDE-ALAILAILSS-HPEGKAIIG 555
Query: 515 ESGAVEALATLLRLGTPRGKKDAVTALFNL 544
S AV +L +R G+PR +++A L +L
Sbjct: 556 SSDAVPSLVEFIRTGSPRNRENAAAVLVHL 585
Score = 148 (57.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 66/243 (27%), Positives = 108/243 (44%)
Query: 315 RRSIARWMEEGHRTCPKTGQML----VHDRLVPNRALRNLIVQWCTAHGIPYDPPETT-D 369
R IA+W E PK L V P A + + W A+G P D +
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGE 375
Query: 370 VSAESFASALPSRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIA 429
+ + +A +R A+ A LL+ L+ R + + + L+ + N+ I
Sbjct: 376 IRLLAKRNA-DNRVAI-AEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSIC-ENNKGAIV 432
Query: 430 KAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSI---VKVLRFG 486
AGAIP + +L + A+EN+ + +LS+ D+NK I G LG+I V +L G
Sbjct: 433 SAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTI----GALGAIPPLVVLLNEG 488
Query: 487 LTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLST 546
T +++AA LF+L +++ K A +G + L LL +A+ L LS+
Sbjct: 489 -TQRGKKDAATALFNL-CIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSS 546
Query: 547 HTD 549
H +
Sbjct: 547 HPE 549
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 51/180 (28%), Positives = 82/180 (45%)
Query: 373 ESFASALPSRAAVEANRATAELL------IQQLANGSPRAKTVAAREI-RLLAKTGKENR 425
E+ A+ L S + ++ N+ T L + L G+ R K AA + L G + +
Sbjct: 453 ENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGK 512
Query: 426 AFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRF 485
A +AG IP L LL+ + ++ + LS + + K+ I+ + S+V+ +R
Sbjct: 513 AI--RAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKA-IIGSSDAVPSLVEFIRT 569
Query: 486 GLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLS 545
G + RENAAA L L + A + G + L L GT RGK+ A L +S
Sbjct: 570 G-SPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERIS 628
Score = 74 (31.1 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQALLFTGT 655
LV +R G+PR +ENA A L+ LC SG K L+G L L GT
Sbjct: 563 LVEFIRTGSPRNRENAAAVLVHLC-SGDPQHLVEAQKL-GLMGPLIDLAGNGT 613
Score = 63 (27.2 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 18/46 (39%), Positives = 22/46 (47%)
Query: 603 LVGMMRCGTPRGKENAVAALLELC-RSGGASATERVLKAPALVGLL 647
LV ++ GT RGK++A AL LC G R P L LL
Sbjct: 481 LVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLL 526
Score = 39 (18.8 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 603 LVGMMRCGTPRGKENAVAALLE 624
L+ + GT RGK A A LLE
Sbjct: 605 LIDLAGNGTDRGKRKA-AQLLE 625
Score = 39 (18.8 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 614 GKENAVAALLELCRSGGASATERVLKAPALVGL 646
G +AV +L+E R+G S R A LV L
Sbjct: 555 GSSDAVPSLVEFIRTG--SPRNRENAAAVLVHL 585
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 590 (212.7 bits), Expect = 4.8e-75, Sum P(3) = 4.8e-75
Identities = 130/269 (48%), Positives = 182/269 (67%)
Query: 288 IPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRAL 347
IP+ F CPI L+LM+DPVI+STGQTY+R SI +W++ GH+TCPK+ + L+H L PN L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 348 RNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSPRAK 407
++LI WC ++GI + P+ S + + + ++ + +R L+++LANG+ +
Sbjct: 308 KSLIALWCESNGI--ELPQNQG-SCRT--TKIGGSSSSDCDRTFVLSLLEKLANGTTEQQ 362
Query: 408 TVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKS 467
AA E+RLLAK +NR IA+AGAIP L LLS+ +P QE+SVTA+LNLSI + NK
Sbjct: 363 RAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKG 422
Query: 468 RIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLR 527
I+D G + IV+VL+ G + EARENAAATLFSLS + E K I +GA++AL +LL
Sbjct: 423 AIVDA-GAITDIVEVLKNG-SMEARENAAATLFSLSVIDENKVAIG-AAGAIQALISLLE 479
Query: 528 LGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
GT RGKKDA TA+FNL + N R ++
Sbjct: 480 EGTRRGKKDAATAIFNLCIYQGNKSRAVK 508
Score = 157 (60.3 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 53/162 (32%), Positives = 84/162 (51%)
Query: 383 AAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLS 442
A V+A T +++ L NGS A+ AA + L+ EN+ I AGAI L +LL
Sbjct: 423 AIVDAGAITD--IVEVLKNGSMEARENAAATLFSLSVID-ENKVAIGAAGAIQALISLLE 479
Query: 443 THNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSL 502
++++ TA+ NL IY NKSR + + G + + ++L+ E A A L L
Sbjct: 480 EGTRRGKKDAATAIFNLCIYQGNKSRAV-KGGIVDPLTRLLKDAGGGMVDE-ALAILAIL 537
Query: 503 SAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNL 544
S E K IA E+ ++ L ++R G+PR +++A L+ L
Sbjct: 538 STNQEGKTAIA-EAESIPVLVEIIRTGSPRNRENAAAILWYL 578
Score = 143 (55.4 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 44/170 (25%), Positives = 84/170 (49%)
Query: 387 ANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNP 446
A LL++ L++ PR + + + L+ + N+ I AGAI + +L +
Sbjct: 384 AEAGAIPLLVELLSSPDPRTQEHSVTALLNLS-INEGNKGAIVDAGAITDIVEVLKNGSM 442
Query: 447 VAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVH 506
A+EN+ + +LS+ D+NK I G + +++ +L G T +++AA +F+L ++
Sbjct: 443 EARENAAATLFSLSVIDENKVAI-GAAGAIQALISLLEEG-TRRGKKDAATAIFNL-CIY 499
Query: 507 EYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
+ K A + G V+ L LL+ +A+ L LST+ + + E
Sbjct: 500 QGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIAE 549
Score = 134 (52.2 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 52/176 (29%), Positives = 82/176 (46%)
Query: 373 ESFASALPSRAAVEANRATA------ELLIQQLANGSPRAKTVAAREI-RLLAKTGKENR 425
E+ A+ L S + ++ N+ + LI L G+ R K AA I L G ++R
Sbjct: 446 ENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSR 505
Query: 426 AFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRF 485
A K G + L LL + ++ + LS + K+ I + E + +V+++R
Sbjct: 506 A--VKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIAEAES-IPVLVEIIRT 562
Query: 486 GLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTAL 541
G + RENAAA L+ L + + +A E GA AL L GT R K+ A + L
Sbjct: 563 G-SPRNRENAAAILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLL 617
Score = 130 (50.8 bits), Expect = 4.8e-75, Sum P(3) = 4.8e-75
Identities = 48/203 (23%), Positives = 85/203 (41%)
Query: 32 LVQTLLSISSELVSCFSDRCFFFQRRNSRSLIRKMEAFLVLLEYLRDSGTCIESTAVLCF 91
L+ L+ E+ S R F + + L+R++ E L D ++ + F
Sbjct: 12 LMSRLVDSVKEISGFSSSRGFIGKIQGD--LVRRITLLSPFFEELIDVNVELKKDQITGF 69
Query: 92 KEXXXXXXXXXXXXXXCGQSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPADDIELSED 151
+ SKL+ L S+ F D+ EI L P + IE+SE+
Sbjct: 70 EAMRIALDSSLELFRSVNGGSKLFQLFDRDSLVEKFRDMTVEIEAALSQIPYEKIEVSEE 129
Query: 152 VREQIDLMQRQARNAKLHIDKNDELLRLRLFSFLDEFEHGRVPNHVDLRSFFVEGLGIKD 211
VREQ+ L+ Q + AK +++D L+L L E+ P+ + L+ E L +
Sbjct: 130 VREQVQLLHFQFKRAKERWEESD----LQLSHDLAMAENVMDPDPIILKRLSQE-LQLTT 184
Query: 212 AKTCRAEIEFLEEQIVNHEGDAE 234
+ E + E ++++GD +
Sbjct: 185 IDELKKESHAIHEYFLSYDGDPD 207
Score = 68 (29.0 bits), Expect = 4.8e-75, Sum P(3) = 4.8e-75
Identities = 23/75 (30%), Positives = 32/75 (42%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQALLFTGTXXXXXXX 662
LV ++R G+PR +ENA A L LC G + A V L + L GT
Sbjct: 556 LVEIIRTGSPRNRENAAAILWYLC-IGNIERLNVAREVGADVALKE-LTENGTDRAKRKA 613
Query: 663 XXXXXVFQRCENAAL 677
+ Q+ E A+
Sbjct: 614 ASLLELIQQTEGVAV 628
Score = 58 (25.5 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQALL 651
L+ ++ GT RGK++A A+ LC G + R +K +V L LL
Sbjct: 474 LISLLEEGTRRGKKDAATAIFNLCIYQGNKS--RAVKG-GIVDPLTRLL 519
Score = 50 (22.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQAL 650
LV ++ PR +E++V ALL L + G ++ A A+ +++ L
Sbjct: 392 LVELLSSPDPRTQEHSVTALLNLSINEGNKGA--IVDAGAITDIVEVL 437
Score = 48 (22.0 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 387 ANRATAELLIQQLA-NGSPRAKTVAAREIRLLAKT 420
A A++ +++L NG+ RAK AA + L+ +T
Sbjct: 589 AREVGADVALKELTENGTDRAKRKAASLLELIQQT 623
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 601 TGLVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQALL 651
T +V +++ G+ +ENA A L L S + A G +QAL+
Sbjct: 431 TDIVEVLKNGSMEARENAAATLFSL------SVIDENKVAIGAAGAIQALI 475
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 564 (203.6 bits), Expect = 8.5e-70, Sum P(3) = 8.5e-70
Identities = 129/270 (47%), Positives = 170/270 (62%)
Query: 286 LSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNR 345
++IP +F CPI L+LM+DPVI+STGQTY+R I +W+ GH TCP T Q + L PN
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNY 330
Query: 346 ALRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSPR 405
LR+LI QWC +G+ +PP+ S P+ A + RA + L+ +L +
Sbjct: 331 VLRSLISQWCETNGM--EPPK------RSTQPNKPTPACSSSERANIDALLSKLCSPDTE 382
Query: 406 AKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKN 465
+ AA E+RLLAK NR IA+AGAIP L +LLS+ + QE++VTA+LNLSI++ N
Sbjct: 383 EQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDN 442
Query: 466 KSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATL 525
K+ I+ G + SIV VL+ G + EARENAAATLFSLS + EYK I GA+ AL L
Sbjct: 443 KASIISS-GAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVTIGG-MGAIPALVVL 499
Query: 526 LRLGTPRGKKDAVTALFNLSTHTDNCVRMI 555
L G+ RGKKDA ALFNL + N R I
Sbjct: 500 LGEGSQRGKKDAAAALFNLCIYQGNKGRAI 529
Score = 125 (49.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 44/174 (25%), Positives = 82/174 (47%)
Query: 381 SRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNL 440
++A++ ++ A + + L NGS A+ AA + L+ E + I GAIP L L
Sbjct: 442 NKASIISSGAVPSI-VHVLKNGSMEARENAAATLFSLSVID-EYKVTIGGMGAIPALVVL 499
Query: 441 LSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLF 500
L + ++++ A+ NL IY NK R + G + I+ ++ T A + A +
Sbjct: 500 LGEGSQRGKKDAAAALFNLCIYQGNKGRAI-RAGLVPLIMGLVTN--PTGALMDEAMAIL 556
Query: 501 SLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVRM 554
S+ + H K + V L ++ GTPR +++A + +L + + V +
Sbjct: 557 SILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHL 610
Score = 121 (47.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 45/154 (29%), Positives = 72/154 (46%)
Query: 395 LIQQLANGSPRAKTVAAREI-RLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSV 453
L+ L GS R K AA + L G + RA +AG +P + L++ + ++
Sbjct: 496 LVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAI--RAGLVPLIMGLVTNPTGALMDEAM 553
Query: 454 TAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIA 513
+ LS + + K+ I E + +V+++ G T RENAAA + L + + +A
Sbjct: 554 AILSILSSHPEGKAAIGAAEP-VPVLVEMIGSG-TPRNRENAAAVMLHLCSGEHHLVHLA 611
Query: 514 --DESGAVEALATLLRLGTPRGKKDAVTALFNLS 545
E G + L L GT RGK+ AV L +S
Sbjct: 612 RAQECGIMVPLRELALNGTDRGKRKAVQLLERMS 645
Score = 101 (40.6 bits), Expect = 8.5e-70, Sum P(3) = 8.5e-70
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 110 QSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPADDIELSEDVREQIDLMQRQARNAKLH 169
+ S++ L+L+ S+ F + ++ L P +++++S++VREQ++L+ Q + AK
Sbjct: 106 EGSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKER 165
Query: 170 IDKNDELLRLRLFSFLDE 187
ID D+ L S D+
Sbjct: 166 IDMPDDEFYNDLLSVYDK 183
Score = 73 (30.8 bits), Expect = 8.5e-70, Sum P(3) = 8.5e-70
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSG 629
LV M+ GTPR +ENA A +L LC SG
Sbjct: 578 LVEMIGSGTPRNRENAAAVMLHLC-SG 603
Score = 39 (18.8 bits), Expect = 3.1e-66, Sum P(3) = 3.1e-66
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 610 GTPRGKENAVAALLELCR 627
GT RGK AV L + R
Sbjct: 629 GTDRGKRKAVQLLERMSR 646
Score = 38 (18.4 bits), Expect = 0.00058, Sum P(3) = 0.00057
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 459 LSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAA 497
LS+YDKN E LG + + L T+ + + A
Sbjct: 178 LSVYDKNYDPSA-ELAILGRLSEKLHLMTITDLTQESLA 215
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 580 (209.2 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
Identities = 131/269 (48%), Positives = 177/269 (65%)
Query: 288 IPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRAL 347
IP +F CPI L+LM+DPVI+S+GQTY+R I +W++ GH+TCPKT Q L H L PN L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 348 RNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSPRAK 407
++LI QWC A+GI + P+ S + A+ + + + A L+ +L +G+ +
Sbjct: 288 KSLISQWCEANGI--ELPKNKQNSRDKKAAK-----SSDYDHAGLVSLMNRLRSGNQDEQ 340
Query: 408 TVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKS 467
AA EIRLLAK NR IA+AGAIP L NLLS+ +P QE++VTA+LNLSI++ NK+
Sbjct: 341 RAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKA 400
Query: 468 RIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLR 527
I+D + IV+VL+ G + E RENAAATLFSLS V E K I +GA+ L LL
Sbjct: 401 SIVDSHA-IPKIVEVLKTG-SMETRENAAATLFSLSVVDENKVTIG-AAGAIPPLINLLC 457
Query: 528 LGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
G+PRGKKDA TA+FNL + N VR ++
Sbjct: 458 DGSPRGKKDAATAIFNLCIYQGNKVRAVK 486
Score = 151 (58.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 48/171 (28%), Positives = 88/171 (51%)
Query: 381 SRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNL 440
++A++ + A ++ ++ L GS + AA + L+ EN+ I AGAIP L NL
Sbjct: 398 NKASIVDSHAIPKI-VEVLKTGSMETRENAAATLFSLSVVD-ENKVTIGAAGAIPPLINL 455
Query: 441 LSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLT-TEARENAAATL 499
L +P ++++ TA+ NL IY NK R + G ++ ++ F + T + A +L
Sbjct: 456 LCDGSPRGKKDAATAIFNLCIYQGNKVRAVKA----GIVIHLMNFLVDPTGGMIDEALSL 511
Query: 500 FSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNL-STHTD 549
S+ A + K + S + L +++ G+PR +++A L+ L S T+
Sbjct: 512 LSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTE 562
Score = 137 (53.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 59/195 (30%), Positives = 91/195 (46%)
Query: 357 AHGIP--YDPPETTDVSA-ESFASALPSRAAVEANRATAEL------LIQQLANGSPRAK 407
+H IP + +T + E+ A+ L S + V+ N+ T LI L +GSPR K
Sbjct: 405 SHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGK 464
Query: 408 TVAAREI-RLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNK 466
AA I L G + RA KAG + HL N L + +++ + L+ + K
Sbjct: 465 KDAATAIFNLCIYQGNKVRA--VKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGK 522
Query: 467 SRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLL 526
I E + +V+V++ G + RENAAA L+ L + + A +G +AL L
Sbjct: 523 IVIARSEP-IPPLVEVIKTG-SPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELS 580
Query: 527 RLGTPRGKKDAVTAL 541
GT R K+ A + L
Sbjct: 581 ETGTDRAKRKASSIL 595
Score = 81 (33.6 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
Identities = 28/126 (22%), Positives = 50/126 (39%)
Query: 56 RRNSRSLIRKMEAFLVLLEYLRDSGTCIESTAVLCFKEXXXXXXXXXXXXXXCGQSSKLW 115
RR L R++ LL++L S + ST + SK+
Sbjct: 20 RRPCADLSRRVRLLAPLLDHLPASSSSSSSTPL------ADALGAARDLLRKTRDGSKID 73
Query: 116 LLLQNHSISGHFHDLNQEISTLLDVFPADDIELSEDVREQIDLMQRQARNAKLHIDKNDE 175
++ + F +N++I LD P + + ++V+EQ+ L+ Q + A D D
Sbjct: 74 QAMRGDAFLDEFAGVNRQIHLALDALPYNTFHMPQEVQEQVALVHSQFQRASTRTDPPDT 133
Query: 176 LLRLRL 181
L + L
Sbjct: 134 QLSMDL 139
Score = 73 (30.8 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVL--KAPALVGLLQALLFTGT 655
LV +++ G+PR +ENA A L LC ++ TE+ L KA + L+ L TGT
Sbjct: 534 LVEVIKTGSPRNRENAAAILWLLC----SADTEQTLAAKAAGVEDALKELSETGT 584
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 567 (204.7 bits), Expect = 3.5e-68, Sum P(4) = 3.5e-68
Identities = 132/270 (48%), Positives = 169/270 (62%)
Query: 286 LSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNR 345
L+IP DF CP+ L+LM+DPVI++TGQTY+R I RW++ G+ TCPKT Q L + L PN
Sbjct: 239 LTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNY 298
Query: 346 ALRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSPR 405
LR+LI +WC H I + P A + R + + L+Q+L++ S
Sbjct: 299 VLRSLISRWCAEHNI--EQP----------AGYINGRTKNSGDMSVIRALVQRLSSRSTE 346
Query: 406 AKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKN 465
+ A EIR L+K +NR IA+AGAIP L NLL++ + QEN++T +LNLSIY+ N
Sbjct: 347 DRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENN 406
Query: 466 KSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATL 525
K IM G + SIV+VLR G T EARENAAATLFSLS E K I SGA+ AL L
Sbjct: 407 KELIMFA-GAVTSIVQVLRAG-TMEARENAAATLFSLSLADE-NKIIIGGSGAIPALVDL 463
Query: 526 LRLGTPRGKKDAVTALFNLSTHTDNCVRMI 555
L GTPRGKKDA TALFNL + N R +
Sbjct: 464 LENGTPRGKKDAATALFNLCIYHGNKGRAV 493
Score = 132 (51.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 50/150 (33%), Positives = 74/150 (49%)
Query: 395 LIQQLANGSPRAKTVAAREI-RLLAKTGKENRAFIAKAGAIPHLRNLLS--THNPVAQEN 451
L+ L NG+PR K AA + L G + RA +AG + L +LS T + + E
Sbjct: 460 LVDLLENGTPRGKKDAATALFNLCIYHGNKGRA--VRAGIVTALVKMLSDSTRHRMVDE- 516
Query: 452 SVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKK 511
++T + L+ KS I+ + L +++ +L+ T RENAAA L SL K
Sbjct: 517 ALTILSVLANNQDAKSAIV-KANTLPALIGILQTDQTRN-RENAAAILLSLCKRDTEKLI 574
Query: 512 IADESGAVEALATLLRLGTPRGKKDAVTAL 541
GAV L L + GT RGK+ A++ L
Sbjct: 575 TIGRLGAVVPLMDLSKNGTERGKRKAISLL 604
Score = 128 (50.1 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 40/129 (31%), Positives = 66/129 (51%)
Query: 422 KENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVK 481
+ N+ I AGA+ + +L A+EN+ + +LS+ D+NK I+ G + ++V
Sbjct: 404 ENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKI-IIGGSGAIPALVD 462
Query: 482 VLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKD-AVTA 540
+L G T +++AA LF+L H K + A +G V AL +L T D A+T
Sbjct: 463 LLENG-TPRGKKDAATALFNLCIYHGNKGR-AVRAGIVTALVKMLSDSTRHRMVDEALTI 520
Query: 541 LFNLSTHTD 549
L L+ + D
Sbjct: 521 LSVLANNQD 529
Score = 61 (26.5 bits), Expect = 3.5e-68, Sum P(4) = 3.5e-68
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCR 627
L+G+++ R +ENA A LL LC+
Sbjct: 543 LIGILQTDQTRNRENAAAILLSLCK 567
Score = 60 (26.2 bits), Expect = 3.5e-68, Sum P(4) = 3.5e-68
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 123 ISGHFHDLNQEISTLLDVFPADDIELSEDVREQIDLMQRQARNA 166
IS F + ++ L P D ++S++V EQ++L + Q R A
Sbjct: 100 ISFQFQCVTWKLEKALSNLPYDLYDISDEVGEQVELARSQLRRA 143
Score = 50 (22.7 bits), Expect = 4.9e-67, Sum P(4) = 4.9e-67
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCR 627
L+ + + GT RGK A++ LLEL R
Sbjct: 585 LMDLSKNGTERGKRKAIS-LLELLR 608
Score = 48 (22.0 bits), Expect = 8.0e-67, Sum P(4) = 8.0e-67
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 601 TGLVGMMRCGTP-RGKENAVAALLELCRSGGA-SATERVLKAPALVGLLQ 648
T LV M+ T R + A+ L L + A SA + PAL+G+LQ
Sbjct: 499 TALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQ 548
Score = 47 (21.6 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 31 ALVQTLLSISSE-LVSCFSD-RCFFFQRRNSRSLIRKMEAFLVLLEYLRDSGTCIESTAV 88
ALVQ L S S+E + S+ R + ++R LI + A VL+ L + A+
Sbjct: 335 ALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAI 394
Query: 89 LC 90
C
Sbjct: 395 TC 396
Score = 43 (20.2 bits), Expect = 3.5e-68, Sum P(4) = 3.5e-68
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 35 TLLSISSELVSCFSDRCFFFQRRNSRSLIRKMEAFLVLLEYLRDSGTCIESTA 87
+LL + +++V + F +++ L R++ LLE +RDS T I+S A
Sbjct: 10 SLLDLIADIVEIPLNTGMF--KKDCADLTRRVCLLTHLLEEIRDS-TPIDSAA 59
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 541 (195.5 bits), Expect = 3.2e-64, Sum P(4) = 3.2e-64
Identities = 132/271 (48%), Positives = 166/271 (61%)
Query: 286 LSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNR 345
L+IP+DF CPI L+LM+DP I+STGQTY+R I RW++ G+ +CPKT Q L + L PN
Sbjct: 241 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNY 300
Query: 346 ALRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSPR 405
LR+LI QWCT H I + S S + A RA L+ +L++ S
Sbjct: 301 VLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRA----LVCKLSSQSIE 356
Query: 406 AKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPV-AQENSVTAMLNLSIYDK 464
+ A EIR L+K +NR IA+AGAIP L LL++ QEN+VT +LNLSIY+
Sbjct: 357 DRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEH 416
Query: 465 NKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALAT 524
NK IM G + SIV VLR G + EARENAAATLFSLS E K I SGA+ AL
Sbjct: 417 NKELIM-LAGAVTSIVLVLRAG-SMEARENAAATLFSLSLADE-NKIIIGASGAIMALVD 473
Query: 525 LLRLGTPRGKKDAVTALFNLSTHTDNCVRMI 555
LL+ G+ RGKKDA TALFNL + N R +
Sbjct: 474 LLQYGSVRGKKDAATALFNLCIYQGNKGRAV 504
Score = 134 (52.2 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 387 ANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNP 446
A T+ +L+ L GS A+ AA + L+ EN+ I +GAI L +LL +
Sbjct: 424 AGAVTSIVLV--LRAGSMEARENAAATLFSLS-LADENKIIIGASGAIMALVDLLQYGSV 480
Query: 447 VAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVH 506
++++ TA+ NL IY NK R + G + +VK+L ++E + A T+ S+ A +
Sbjct: 481 RGKKDAATALFNLCIYQGNKGRAV-RAGIVKPLVKMLTDS-SSERMADEALTILSVLASN 538
Query: 507 EYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNL 544
+ K + A+ L L+ PR +++A L L
Sbjct: 539 QVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCL 576
Score = 59 (25.8 bits), Expect = 3.2e-64, Sum P(4) = 3.2e-64
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 123 ISGHFHDLNQEISTLLDVFPADDIELSEDVREQIDLMQRQARNA 166
IS F + ++ L D ++S++VREQ++L + Q R A
Sbjct: 105 ISFQFQCVTWKLEKALGDLTYDRYDISDEVREQVELARLQLRRA 148
Score = 54 (24.1 bits), Expect = 3.2e-64, Sum P(4) = 3.2e-64
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCR 627
L+ ++ PR +ENA A LL LC+
Sbjct: 554 LIDCLQKDQPRNRENAAAILLCLCK 578
Score = 46 (21.3 bits), Expect = 2.2e-63, Sum P(4) = 2.2e-63
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 614 GKENAVAALLELCRSGGASATERVL-KAPALVGLLQ 648
G+ AV L+EL R G TER KA +L+ LL+
Sbjct: 588 GRLGAVVPLMELSRDG----TERAKRKANSLLELLR 619
Score = 39 (18.8 bits), Expect = 3.2e-64, Sum P(4) = 3.2e-64
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 56 RRNSRSLIRKMEAFLVLLEYLRDSGTCIESTA 87
+++ L R++ L+E +RDS ES A
Sbjct: 29 KKDCSDLARRVGLLTHLIEEIRDSSPPSESDA 60
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 571 (206.1 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 166/542 (30%), Positives = 278/542 (51%)
Query: 25 VDLTDVALVQTLLSISSELVSCFSDRCFFFQRRNSRSLIRKMEAFLVLLEYLRDS---GT 81
+ LT LV +LL ++ E++S F + F +R+ + +R ++ ++ E LR G+
Sbjct: 24 ISLT--TLVDSLLQLAGEILS-FKPKHFSTNKRSVKETLRHVQTLVIFFEELRIQIRVGS 80
Query: 82 CIESTAV-LCFKEXXXXXXXXXXXXXXCGQS-SKLWLLLQNHSISGHFHDLNQEISTLLD 139
+V L E C + +KL++L+ + +S HF DL + IST LD
Sbjct: 81 IPAGRSVILSLSELHVIFQKLKFLLDDCTRDGAKLYMLMNSGQVSAHFRDLTRSISTSLD 140
Query: 140 VFPADDIELSEDVREQIDLMQRQARNAKLHIDKNDELLRLRLFSFLDEFEHGRVPNHVDL 199
FP ++L +V E I L+ RQ R ++ D++D+ ++ F + FE+ PN ++
Sbjct: 141 TFPVRSVDLPGEVNELIYLVMRQTRKSEARPDRDDKRAIDSVYWFFNLFENRINPNSDEI 200
Query: 200 RSFFVEGLGIKDAKTCRAEIEFLEEQI-VNHEGDAE-PTASVLNGFVAIMRYSRFLLFGF 257
++ +G++ + C EI+FL E+I V + + E S L GF+ R +L G
Sbjct: 201 LRV-LDHIGVRKWRDCVKEIDFLREEISVGKKSNIEIELLSNLMGFICYCRC--VILRGI 257
Query: 258 EEDEAELGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRS 317
+ D+ E K+ ++ + L++ D CPI L++M DPV++ +G TYDR S
Sbjct: 258 DVDDEE----KDKEEDDLMMVRS-----LNVD-DLRCPISLEIMSDPVVLESGHTYDRSS 307
Query: 318 IARWMEEGHRTCPKTGQMLVHDRLVPNRALRNLIVQWCTAHGIPYDPPETTDVSAESFAS 377
I +W G+ TCPKTG+ LV LV N +++ +I + +G+ V A
Sbjct: 308 ITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQSYSKQNGVVMGQKGKKKVDV---AE 364
Query: 378 ALPSRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHL 437
+L AA EA + TAE L +L G A EIR+L KT R+ + +AG + L
Sbjct: 365 SL---AAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRILTKTSTFYRSCLVEAGVVESL 421
Query: 438 RNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGC-LGSIVKVLRFGLTTEARENAA 496
+L + +P QEN++ ++NLS K+RI+ E+G L IV+VL G E+R+ AA
Sbjct: 422 MKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAA 481
Query: 497 ATLFSLSAVHEYKKKIADESGAVEALATLLRLGT--PRGKKDAVTALFNL-STHTDNCVR 553
A LF LS++ +Y + I + S A+ L +++ K++A+ A+ +L DN R
Sbjct: 482 AALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSLLMNQPDNHWR 541
Query: 554 MI 555
++
Sbjct: 542 IL 543
Score = 74 (31.1 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 611 TPRGKENAVAALLELCRSGGASATERVLKAPALVGLL 647
+P K++ VA LL LC +GG+ + K P+++G L
Sbjct: 604 SPATKQHCVALLLNLCHNGGSDVVGSLAKNPSIMGSL 640
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 139/369 (37%), Positives = 197/369 (53%)
Query: 287 SIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRA 346
+IP DF CPI L+LMRDPV+++TGQTYDR SI W++ GH TCPKTGQ+L H LVPNRA
Sbjct: 273 NIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRA 332
Query: 347 LRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSPRA 406
L+NLIV WC IP++ + + P + AVE + LI++L+
Sbjct: 333 LKNLIVLWCRDQKIPFE------LYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNG 386
Query: 407 KTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNK 466
E+R LAK+ RA IA+AGAIP L L+T P Q N+VT +LNLSI ++NK
Sbjct: 387 VVF---ELRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQNK 443
Query: 467 SRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLL 526
+RIM+ +G L +++VLR G T EA+ NAAATLFSL+ V Y++++ ++ V L L
Sbjct: 444 TRIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLA 503
Query: 527 RLGTPRGKKDAVTALFNLSTHTDNCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQ 586
+ G K+DA+ A+ NL +N R +E R
Sbjct: 504 KQGPTSSKRDALVAILNLVAERENVGRFVEAGVMGAAGDAFQELPEEAVAVVEAVVR-RG 562
Query: 587 PIXXXXXXXXXXXXTGLVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGL 646
+ G V MR G +E+A A L+ +CR GG+ + P + +
Sbjct: 563 GLMAVSAAFSLIRLLGEV--MREGADTTRESAAATLVTMCRKGGSELVAEMAAIPGIERV 620
Query: 647 LQALLFTGT 655
+ ++ GT
Sbjct: 621 IWEMIGAGT 629
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 126/347 (36%), Positives = 192/347 (55%)
Query: 20 AFLAPVDLTDVALVQTLLSISSELVSCFSDRCFFFQRRNSRSLIRKMEAFLVLLEYL--- 76
+F +P +D L ++L S E+ S F RRNS SLIRK++ + + L
Sbjct: 21 SFESPKLSSDTKLTRSLFLASHEISSM--QPLPFILRRNSLSLIRKVKILASVFDELLLP 78
Query: 77 RDSGTCIESTAVLCFKEXXXXXXXXXXXXXXCGQSSKLWLLLQNHSISGHFHDLNQEIST 136
R +A LCF+E C + SKLWLLLQ ++ +FH+L ++ST
Sbjct: 79 RSQLVVYSQSAHLCFEEMQIVMQRIKSLIDDCSRVSKLWLLLQIDIVAFNFHELVTDLST 138
Query: 137 LLDVFPADDIELSEDVREQIDLMQRQARNAKLHIDKNDELLRLRLFSFLDEFEHGRVPNH 196
+LD+ P D +LS+D ++ I L+ +Q ++ +D D LR ++ + +H P+H
Sbjct: 139 VLDILPLHDFDLSDDAQDLISLLTKQCSDSVQFVDARDVALRRKVTDTIAGIKHQISPDH 198
Query: 197 VDLRSFFVEGLGIKDAKTCRAEIEFLEEQIVNHEGDAEPTASVLNGFVAIMRYSRFLLFG 256
L F + LG+ D+ + EI+ LE++I + D +A+ + ++RYS+ +L+G
Sbjct: 199 STLIKIFND-LGLSDSASLTDEIQRLEDEIQDQIDDRSKSAAA--SLIGLVRYSKCVLYG 255
Query: 257 FEEDEAELGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRR 316
+ RR Q +++ +IP DF CPI L+LMRDPV+++TGQTYDR
Sbjct: 256 PSTPAPDF-------RRH----QSLSDA--NIPADFRCPITLELMRDPVVVATGQTYDRE 302
Query: 317 SIARWMEEGHRTCPKTGQMLVHDRLVPNRALRNLIVQWCTAHGIPYD 363
SI W++ GH TCPKTGQ+L H LVPNRAL+NLIV WC IP++
Sbjct: 303 SIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVLWCRDQKIPFE 349
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 551 (199.0 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 163/542 (30%), Positives = 269/542 (49%)
Query: 30 VALVQTLLSISSELVSCFSDRCFFFQRRNSRSLIRKMEAFLVLLEYLR----DSGTCI-E 84
V L+ +L+ ++ ++++ F + F +++ R +R+++ LV+ E +R +S +
Sbjct: 27 VTLLDSLIQLAGDILT-FKSKHFSTNKQSFRETLRRIQNLLVVFEEIRIRIRNSRRYFHD 85
Query: 85 STAVLCFKEXXXXXXXXXXXXXXCGQS-SKLWLLLQNHSISGHFHDLNQEISTLLDVFPA 143
S A KE C + ++L +++ + +S H L + IST L FP
Sbjct: 86 SAAASSLKEIHVGFQKLKFLLEDCTRDGARLCMMMNSDQVSDHLRVLTRSISTSLSAFPV 145
Query: 144 DDIELSEDVREQIDLMQRQARNAKLHIDKNDELLRLRLFSFLDEFEHGRVPNHVDLRSFF 203
++L+ +V E IDL+ RQAR + + ND+ + L F + VP+ ++
Sbjct: 146 ASVDLTTEVNELIDLVVRQARKYGVQPETNDKRAVSSINRILALFVNRVVPDPDEINRI- 204
Query: 204 VEGLGIKDAKTCRAEIEFLEEQIVNHEGDAEPTAS-----VLNGFVAIMRYSRFLLFG-F 257
++ +GI+ C EI FL E+I D + S +L+ + + Y R ++ G
Sbjct: 205 LDHVGIRKWGDCVKEINFLGEEIDAERLDEKKKKSSDQVELLSSLMGFICYCRCIILGRI 264
Query: 258 EEDEAELGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRS 317
E D+ H G+ L + +D CPI L++M DPV+I TG TYDR S
Sbjct: 265 ERDD------HHNHHEDGIKKDHDLIRGLKV-EDLLCPISLEIMTDPVVIETGHTYDRSS 317
Query: 318 IARWMEEGHRTCPKTGQMLVHDRLVPNRALRNLIVQWCTAHGIPYDPPETTDVSAESFAS 377
I +W G+ TCP TG++L LV N ++R +I + C +GI +S
Sbjct: 318 ITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIVL---AGISRRRKSHDD 374
Query: 378 ALP-SRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPH 436
+P S AA A + A+ L +L NG A REIR+ KT NR+ + KAGA+
Sbjct: 375 VVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTP 434
Query: 437 LRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAA 496
L LLS+ + QEN++ +LNLS + KS+I E G L +V++L G TE R +A
Sbjct: 435 LLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAGE-G-LKILVEILNEGAKTETRLYSA 492
Query: 497 ATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRG---KKDAVTALFNLSTHTDNCVR 553
+ LF LS+V +Y + I + A+ L +++ G G K+ A+ A+ L +DN R
Sbjct: 493 SALFYLSSVEDYSRLIGENPDAIPGLMNIVK-GDDYGDSAKRSALLAVMGLLMQSDNHWR 551
Query: 554 MI 555
++
Sbjct: 552 VL 553
Score = 56 (24.8 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 615 KENAVAALLELCRSGGASATERVLKAPALVGLLQALLFTG 654
K++ V +L LC +GG ++K ++G L +L G
Sbjct: 619 KQHCVGLILNLCLNGGRDVVGVLVKNSLVMGSLYTVLSNG 658
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 528 (190.9 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 125/282 (44%), Positives = 176/282 (62%)
Query: 276 LITQEIAE-TFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQ 334
+I + I + T L +P +F CPI L++M DPVII+TGQTY++ SI +W + GH+TCPKT Q
Sbjct: 277 VINKAITKSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQ 336
Query: 335 MLVHDRLVPNRALRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAEL 394
L H L PN AL+NLI+QWC + + PE +VS +S + L
Sbjct: 337 ELDHLSLAPNFALKNLIMQWCEKNN--FKIPEK-EVSPDS----------QNEQKDEVSL 383
Query: 395 LIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVT 454
L++ L++ + + +++RLLA+ ENR IA AGAIP L LLS + QEN+VT
Sbjct: 384 LVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVT 443
Query: 455 AMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIAD 514
+LNLSI + NK +++ EG + +I+++L G EAREN+AA LFSLS + E K I
Sbjct: 444 TLLNLSIDEVNK-KLISNEGAIPNIIEILENG-NREARENSAAALFSLSMLDENKVTIGL 501
Query: 515 ESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
+G + L LL+ GT RGKKDA+TALFNLS ++ N R I+
Sbjct: 502 SNG-IPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAID 542
Score = 415 (151.1 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 146/542 (26%), Positives = 258/542 (47%)
Query: 41 SELVSC--FSDRCFFFQRRNSRSLIRKMEAFLVLLEYLRDSGTCIESTAVLCF-KEXXXX 97
S++VS F D+ ++R + + +L+ +L D ES + F
Sbjct: 55 SDIVSIVEFLDQINGYRRTQQKECFNLVRRLKILIPFL-DEIRGFESPSCKHFLNRLRKV 113
Query: 98 XXXXXXXXXXCGQSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPADDIELSEDVREQID 157
C SK+++ L ++ FH + ++++ +L P D++ +S D +++ID
Sbjct: 114 FLAAKKLLETCSNGSKIYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEID 173
Query: 158 LMQRQARNAKLHIDKNDELLRLRLFSFLDEFEHGRVPNHVDLRSFFVEGLGIK-DAKTCR 216
+ +Q + AK D D L + + + + P + D S +E L K + +T
Sbjct: 174 SLCKQLKKAKRRTDTQDIELAVDMMVVFSKTD----PRNAD--SAIIERLAKKLELQT-- 225
Query: 217 AEIEFLEEQIVNHEGDAEPTASVLNGFVAIMRYSRFLLFGFEEDEAELGIGSHKKRRKGL 276
I+ L+ + + + + LN + ++ LL F++ + G+ + + +
Sbjct: 226 --IDDLKTETIAIQSLIQDKGG-LN--IETKQHIIELLNKFKKLQ---GLEATDILYQPV 277
Query: 277 ITQEIAE-TFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQM 335
I + I + T L +P +F CPI L++M DPVII+TGQTY++ SI +W + GH+TCPKT Q
Sbjct: 278 INKAITKSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQE 337
Query: 336 LVHDRLVPNRALRNLIVQWCTAHG--IPYDP--PETTDVSAESFA---SALPSRAAVEAN 388
L H L PN AL+NLI+QWC + IP P++ + + + AL S E
Sbjct: 338 LDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQR 397
Query: 389 RATAELLIQQLANGSPRAKTVAAREIRLLAK------TGKE---------------NRAF 427
R+ ++ + N R A I LL + +G + N+
Sbjct: 398 RSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKL 457
Query: 428 IAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGL 487
I+ GAIP++ +L N A+ENS A+ +LS+ D+NK I G + +V +L+ G
Sbjct: 458 ISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNG-IPPLVDLLQHG- 515
Query: 488 TTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTH 547
T +++A LF+LS ++ K A ++G V+ L LL+ +A++ L L++H
Sbjct: 516 TLRGKKDALTALFNLS-LNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASH 574
Query: 548 TD 549
+
Sbjct: 575 PE 576
Score = 139 (54.0 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 43/169 (25%), Positives = 82/169 (48%)
Query: 387 ANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNP 446
+N +I+ L NG+ A+ +A + L+ EN+ I + IP L +LL
Sbjct: 459 SNEGAIPNIIEILENGNREARENSAAALFSLSMLD-ENKVTIGLSNGIPPLVDLLQHGTL 517
Query: 447 VAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLR---FGLTTEARENAAATLFSLS 503
+++++TA+ NLS+ NK R +D G + ++ +L+ G+ EA ++ L
Sbjct: 518 RGKKDALTALFNLSLNSANKGRAIDA-GIVQPLLNLLKDKNLGMIDEA-----LSILLLL 571
Query: 504 AVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCV 552
A H ++ + +E L +R GTP+ K+ A + L L ++ + +
Sbjct: 572 ASHPEGRQAIGQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFI 620
Score = 58 (25.5 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 603 LVGMMRCGTPRGKENAVAALLEL 625
LV +R GTP+ KE A + LLEL
Sbjct: 590 LVEFIRQGTPKNKECATSVLLEL 612
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 341 (125.1 bits), Expect = 2.5e-50, Sum P(5) = 2.5e-50
Identities = 85/191 (44%), Positives = 116/191 (60%)
Query: 372 AESFASALPSRAAVEANRATAEL------LIQQLANGSPRAKTVAAREIRLLAKTGKENR 425
+E S + S + E R +E+ L+++L + S + A E+RLLAK +NR
Sbjct: 520 SERLGSRIVSAPSNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNR 579
Query: 426 AFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRF 485
I +GAI L LL + + QEN+VTA+LNLSI D NK I D G + ++ VL
Sbjct: 580 IVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADA-GAIEPLIHVLEN 638
Query: 486 GLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLS 545
G ++EA+EN+AATLFSLS + E K KI +SGA+ L LL GTPRGKKDA TALFNLS
Sbjct: 639 G-SSEAKENSAATLFSLSVIEENKIKIG-QSGAIGPLVDLLGNGTPRGKKDAATALFNLS 696
Query: 546 THTDNCVRMIE 556
H +N +++
Sbjct: 697 IHQENKAMIVQ 707
Score = 219 (82.2 bits), Expect = 2.5e-50, Sum P(5) = 2.5e-50
Identities = 44/122 (36%), Positives = 73/122 (59%)
Query: 276 LITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQM 335
L+ ++ + ++I DF CP+ L++M DPVI+S+GQTY++ I RW++ G + CPKT Q
Sbjct: 221 LLIKQTQTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQT 280
Query: 336 LVHDRLVPNRALRNLIVQWCTAHGIPY-DPPETTDVSAES----FASALPSRAA-VEANR 389
L H L+PN ++ LI WC + + DP ++T ++ S ++PS A V A +
Sbjct: 281 LTHTTLIPNYTVKALIANWCETNDVKLPDPNKSTSLNELSPLLSCTDSIPSTGADVSARK 340
Query: 390 AT 391
+
Sbjct: 341 VS 342
Score = 192 (72.6 bits), Expect = 4.4e-30, Sum P(5) = 4.4e-30
Identities = 53/169 (31%), Positives = 91/169 (53%)
Query: 387 ANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNP 446
A+ E LI L NGS AK +A + L+ +EN+ I ++GAI L +LL P
Sbjct: 624 ADAGAIEPLIHVLENGSSEAKENSAATLFSLSVI-EENKIKIGQSGAIGPLVDLLGNGTP 682
Query: 447 VAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVH 506
++++ TA+ NLSI+ +NK+ I+ + G + ++ ++ + A A L +L+ +
Sbjct: 683 RGKKDAATALFNLSIHQENKAMIV-QSGAVRYLIDLM--DPAAGMVDKAVAVLANLATIP 739
Query: 507 EYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVRMI 555
E + I E G + L ++ LG+ RGK++A AL LST++ M+
Sbjct: 740 EGRNAIGQEGG-IPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMV 787
Score = 163 (62.4 bits), Expect = 4.4e-26, Sum P(4) = 4.4e-26
Identities = 54/177 (30%), Positives = 93/177 (52%)
Query: 373 ESFASALPSRAAVEANRA----TAEL--LIQQLANGSPRAKTVAAREIRLLAKTGKENRA 426
E+ A+ L S + +E N+ + + L+ L NG+PR K AA + L+ +EN+A
Sbjct: 645 ENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLS-IHQENKA 703
Query: 427 FIAKAGAIPHLRNLLSTHNPVAQ--ENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLR 484
I ++GA+ +L +L+ +P A + +V + NL+ + ++ I +EG + +V+V+
Sbjct: 704 MIVQSGAVRYLIDLM---DPAAGMVDKAVAVLANLATIPEGRNAI-GQEGGIPLLVEVVE 759
Query: 485 FGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTAL 541
G + +ENAAA L LS + + GAV L L + GTPR ++ A L
Sbjct: 760 LG-SARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALL 815
Score = 91 (37.1 bits), Expect = 6.6e-19, Sum P(5) = 6.6e-19
Identities = 41/165 (24%), Positives = 65/165 (39%)
Query: 465 NKSR--IMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIA-DESGAVEA 521
N++R + + E + +V+ L+ + + + A A L L A H +I SGA+
Sbjct: 533 NETRRDLSEVETQVKKLVEELKSS-SLDTQRQATAEL-RLLAKHNMDNRIVIGNSGAIVL 590
Query: 522 LATLLRLGTPRGKKDAVTALFNLSTHTDNCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXX 581
L LL +++AVTAL NLS + +N + +
Sbjct: 591 LVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAAT 650
Query: 582 XXXRQPIXXXXXXXXXXXXTG-LVGMMRCGTPRGKENAVAALLEL 625
I G LV ++ GTPRGK++A AL L
Sbjct: 651 LFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNL 695
Score = 76 (31.8 bits), Expect = 2.5e-50, Sum P(5) = 2.5e-50
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLK---APALVGLLQA 649
LV ++ G+ RGKENA AALL+L + G VL+ P LV L Q+
Sbjct: 754 LVEVVELGSARGKENAAAALLQLSTNSGRFCN-MVLQEGAVPPLVALSQS 802
Score = 48 (22.0 bits), Expect = 1.9e-47, Sum P(5) = 1.9e-47
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 603 LVGMMRCGTPRGKENAVAAL 622
LV + + GTPR +E A A L
Sbjct: 796 LVALSQSGTPRAREKAQALL 815
Score = 46 (21.3 bits), Expect = 2.5e-50, Sum P(5) = 2.5e-50
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 147 ELSEDVREQIDLMQR-QARNAKLH-IDKNDELLRLRLFSFLDEFE 189
EL++DV + IDL + QA ++K++ + + + LL + +D F+
Sbjct: 66 ELTQDVDQSIDLFRSWQAFSSKVYFVLQIESLLPKMRDTIVDTFQ 110
Score = 38 (18.4 bits), Expect = 2.0e-46, Sum P(5) = 2.0e-46
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 615 KENAVAALLELCRSGGASATERVLKAPALV 644
+E AV L+ L +SG A E KA AL+
Sbjct: 789 QEGAVPPLVALSQSGTPRARE---KAQALL 815
Score = 37 (18.1 bits), Expect = 2.5e-50, Sum P(5) = 2.5e-50
Identities = 7/11 (63%), Positives = 10/11 (90%)
Query: 217 AEIEFLEEQIV 227
AE+EFL++ IV
Sbjct: 201 AEVEFLDQLIV 211
Score = 37 (18.1 bits), Expect = 2.5e-46, Sum P(5) = 2.5e-46
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 614 GKENAVAALLELCRSGGASATERVLKAPALVGL 646
G+E + L+E+ G A E A AL+ L
Sbjct: 746 GQEGGIPLLVEVVELGSARGKENA--AAALLQL 776
Score = 37 (18.1 bits), Expect = 2.4e-13, Sum P(4) = 2.4e-13
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 615 KENAVAALLELCRSGGASATERVLKAPALVGLLQALL 651
+ENAV ALL L S + KA A G ++ L+
Sbjct: 603 QENAVTALLNL------SINDNNKKAIADAGAIEPLI 633
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 319 (117.4 bits), Expect = 5.8e-45, Sum P(3) = 5.8e-45
Identities = 74/162 (45%), Positives = 104/162 (64%)
Query: 395 LIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVT 454
L++ L +GS + KT AA EIR L ENR I + GAI L +LL + + QE++VT
Sbjct: 477 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVT 536
Query: 455 AMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIAD 514
A+LNLSI + NK+ I+ E G + +V VL G A+EN+AA+LFSLS + +++I
Sbjct: 537 ALLNLSISELNKAMIV-EVGAIEPLVHVLNTG-NDRAKENSAASLFSLSVLQVNRERIGQ 594
Query: 515 ESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
+ A++AL LL GT RGKKDA +ALFNLS DN R+++
Sbjct: 595 SNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQ 636
Score = 204 (76.9 bits), Expect = 5.8e-45, Sum P(3) = 5.8e-45
Identities = 36/81 (44%), Positives = 55/81 (67%)
Query: 280 EIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHD 339
E+A+ +SIP F CP+ +LM DPVI+++GQT+DR SI +W++ G CP+T Q+L H
Sbjct: 231 EVAKG-ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQ 289
Query: 340 RLVPNRALRNLIVQWCTAHGI 360
L+PN ++ +I W A+ I
Sbjct: 290 ELIPNYTVKAMIASWLEANRI 310
Score = 147 (56.8 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 58/195 (29%), Positives = 100/195 (51%)
Query: 370 VSAESFASALPSRAAVEANRA------TAELLIQQLANGSPRAKTVAAREIRLLAKTGKE 423
++ E +AL + + E N+A E L+ L G+ RAK +A + L+ +
Sbjct: 529 LTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVL-QV 587
Query: 424 NRAFIAKAGA-IPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKV 482
NR I ++ A I L NLL ++++ +A+ NLSI NK+RI+ + + +V++
Sbjct: 588 NRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKA-VKYLVEL 646
Query: 483 LRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALF 542
L L E + A A L +LSAV E ++ I E G + L + LG+ RGK++A + L
Sbjct: 647 LDPDL--EMVDKAVALLANLSAVGEGRQAIVREGG-IPLLVETVDLGSQRGKENAASVLL 703
Query: 543 NLSTHTDN-CVRMIE 556
L ++ C +++
Sbjct: 704 QLCLNSPKFCTLVLQ 718
Score = 133 (51.9 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 369 DVSAESFASALPSRAAVEANR-------ATAELLIQQLANGSPRAKTVAAREIRLLAKTG 421
D + E+ A++L S + ++ NR A + L+ L G+ R K AA + L+ T
Sbjct: 569 DRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSIT- 627
Query: 422 KENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVK 481
+N+A I +A A+ +L LL + + +V + NLS + + I+ EG + +V+
Sbjct: 628 HDNKARIVQAKAVKYLVELLDPDLEMV-DKAVALLANLSAVGEGRQAIV-REGGIPLLVE 685
Query: 482 VLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTAL 541
+ G + +ENAA+ L L + + GA+ L L + GT R K+ A L
Sbjct: 686 TVDLG-SQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLL 744
Query: 542 FNLSTHTD 549
+ D
Sbjct: 745 SHFRNQRD 752
Score = 86 (35.3 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 33/120 (27%), Positives = 60/120 (50%)
Query: 438 RNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAA 497
+NL S++N V E+S S++D + S M + +V+ L+ G + + + AAA
Sbjct: 438 KNLESSNN-VNHEHSAAKTYECSVHDLDDSGTMTTSHTI-KLVEDLKSG-SNKVKTAAAA 494
Query: 498 TLFSLSAVHEYKKKI-ADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
+ L+ ++ + ++ GA+ L +LL ++ AVTAL NLS N ++E
Sbjct: 495 EIRHLT-INSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVE 553
Score = 71 (30.1 bits), Expect = 5.8e-45, Sum P(3) = 5.8e-45
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQALLFTGT 655
LV + G+ RGKENA + LL+LC + T VL+ A+ L+ AL +GT
Sbjct: 683 LVETVDLGSQRGKENAASVLLQLCLNSPKFCT-LVLQEGAIPPLV-ALSQSGT 733
Score = 57 (25.1 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQAL 650
LV ++ GT RGK++A +AL L + A R+++A A+ L++ L
Sbjct: 602 LVNLLGKGTFRGKKDAASALFNLSITHDNKA--RIVQAKAVKYLVELL 647
Score = 55 (24.4 bits), Expect = 5.9e-18, Sum P(3) = 5.9e-18
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQALLFTGT 655
LV ++ G R KEN+ A+L L S ER+ ++ A + L LL GT
Sbjct: 560 LVHVLNTGNDRAKENSAASLFSL--SVLQVNRERIGQSNAAIQALVNLLGKGT 610
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 405 (147.6 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 99/281 (35%), Positives = 156/281 (55%)
Query: 280 EIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHD 339
E+ ET +S P++F CP+ +LMRDPV++++GQTYD+ I +W+ G+RTCPKT Q+L H
Sbjct: 67 EMLET-VSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHT 125
Query: 340 RLVPNRALRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQL 399
L PN +R +I +WC +G+ ET + + ++R L+ ++
Sbjct: 126 ALTPNLLIREMISKWCKKNGL-----ETKSQYHPNLVNE--DETVTRSDREIFNSLLCKV 178
Query: 400 ANGSPRAKTVAAREIRLLAKTGKENRAFIAKA-GAIPHLRN-LLSTHNP--VAQENSVTA 455
++ + + + AA+E+RLL + G E RA ++ I L N LL NP QE+ VT
Sbjct: 179 SSSNLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTT 238
Query: 456 MLNLSIYD-KNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIAD 514
+LN+SI+D NK + + + ++ LR G T R NAAA +F+LSA+ + K +
Sbjct: 239 LLNISIHDDSNKKLVCENPNVIPLLIDALRRG-TVATRSNAAAAIFTLSAL-DSNKVLIG 296
Query: 515 ESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVRMI 555
+SG ++ L LL G P KD A+F L +N R +
Sbjct: 297 KSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAV 337
Score = 39 (18.8 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 613 RGKENAVAALLELCRS 628
R KENA+ L +C S
Sbjct: 395 RNKENAIVILHTICFS 410
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 352 (129.0 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 106/289 (36%), Positives = 155/289 (53%)
Query: 277 ITQEIAETFLS---IPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTG 333
+ +I E+ +S +PK+F C + +M +PVII++GQTY++R I W++ RTCPKT
Sbjct: 58 VESKIPESDISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTK 116
Query: 334 QMLVHDRLVPNRALRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAE 393
Q+L H +PN + +LI QWC + + P + ++ AE F S + E
Sbjct: 117 QVLSHRLWIPNHLISDLITQWCLVNKYDHQKP-SDELVAELFTSDI-------------E 162
Query: 394 LLIQQLANGSPRAKTV-AAREIRLLAKTGKENRAFIAKAG---AIPHLRNLLSTHNPVA- 448
L+Q++++ S A + AA+E+R K R F AG +I L + LST +
Sbjct: 163 ALLQRVSSSSSVADQIEAAKELRHQTKKFPNVRVFFV-AGIHDSITRLLSPLSTLDEAVD 221
Query: 449 -----QENSVTAMLNLSIYDKNKSRIMDEEGCL--GSIVKVLRFGLTTEARENAAATLFS 501
QEN VTA+ NLSI + NK+ I E CL + K L+ G T E R NAAATL S
Sbjct: 222 SSLELQENIVTALFNLSILESNKTVIA--ENCLVIPLLTKSLKQG-TDETRRNAAATLSS 278
Query: 502 LSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDN 550
LSA+ + K I S AV+AL L+ G K+A + +FNL +N
Sbjct: 279 LSAI-DSNKIIIGNSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLEN 326
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 349 (127.9 bits), Expect = 3.8e-31, P = 3.8e-31
Identities = 92/270 (34%), Positives = 147/270 (54%)
Query: 288 IPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDR-LVPNRA 346
+P DF CPI L++M DPVI+ +G T+DR SI +W++ G+RTCP T L L+PN A
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 347 LRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSPRA 406
LR+LI+ + P T + S + AL S L+ Q ++ + +
Sbjct: 65 LRSLILNFAHVSLKESSRPRTQQEHSHSQSQALIST------------LVSQSSSNASKL 112
Query: 407 KTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNK 466
+++ R +RL K R + ++GA+ + + + N V QE S++ +LNLS+ D NK
Sbjct: 113 ESLT-RLVRL-TKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNK 170
Query: 467 SRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLL 526
++ +G + IV VLR G + + + AA L SL+ V K I A+ AL +LL
Sbjct: 171 VGLV-ADGVIRRIVTVLRVG-SPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLL 228
Query: 527 RLGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
R+G R +K++ TAL+ L + DN R+++
Sbjct: 229 RVGNDRERKESATALYALCSFPDNRKRVVD 258
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 323 (118.8 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 76/162 (46%), Positives = 102/162 (62%)
Query: 395 LIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVT 454
LI L + S + A IR+LA+ +NR IA+ AIP L +LL + + Q ++VT
Sbjct: 426 LIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVT 485
Query: 455 AMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIAD 514
+LNLSI D NKS I E G + ++ VL+ G EA+ N+AATLFSLS + EYK +I
Sbjct: 486 CLLNLSINDNNKSLIA-ESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIG- 543
Query: 515 ESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
E+GA+E L LL G+ GKKDA TALFNLS H +N ++IE
Sbjct: 544 EAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIE 585
Score = 240 (89.5 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 73/265 (27%), Positives = 124/265 (46%)
Query: 288 IPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRAL 347
+P DF C + L+LM DPVI+++GQT++R I +W++ G CPKT Q L H L PN +
Sbjct: 240 VPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIV 299
Query: 348 RNLIVQWCTAHGI-PYDPPETTDVSAESFASALPS-RAAVEANRATAELLIQQLANGSPR 405
R + WC + + P DP E S+E F + S RA+ N + L ++L R
Sbjct: 300 RAFLASWCETNNVYPPDPLELIH-SSEPFPLLVESVRASSSENGHSESLDAEELRQVFSR 358
Query: 406 AKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKN 465
+ + ++ KT + N A ++ R+ P + ++ ++ +
Sbjct: 359 SASAPGIVSEVVCKTKRNNNAAADRSLT----RSNTPWKFPEERHWRHPGIIPATVRETG 414
Query: 466 KSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATL 525
S ++ E + ++ L+ RE A A + L+ + + A+ +L +L
Sbjct: 415 SSSSIETE--VKKLIDDLKSSSLDTQRE-ATARIRILARNSTDNRIVIARCEAIPSLVSL 471
Query: 526 LRLGTPRGKKDAVTALFNLSTHTDN 550
L R + DAVT L NLS + +N
Sbjct: 472 LYSTDERIQADAVTCLLNLSINDNN 496
Score = 175 (66.7 bits), Expect = 5.0e-09, Sum P(3) = 5.0e-09
Identities = 54/165 (32%), Positives = 91/165 (55%)
Query: 395 LIQQLANGS-PRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSV 453
LI L G AK +A + L+ +E + I +AGAI L +LL + + ++++
Sbjct: 509 LIHVLKTGYLEEAKANSAATLFSLSVI-EEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAA 567
Query: 454 TAMLNLSIYDKNKSRIMDEEGCLGSIVKVL--RFGLTTEARENAAATLFSLSAVHEYKKK 511
TA+ NLSI+ +NK++++ E G + +V+++ FG+ E A L +L+ V E K
Sbjct: 568 TALFNLSIHHENKTKVI-EAGAVRYLVELMDPAFGMV----EKAVVVLANLATVREGKIA 622
Query: 512 IADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDN-CVRMI 555
I +E G + L ++ LG+ RGK++A AL L TH+ C +I
Sbjct: 623 IGEEGG-IPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVI 666
Score = 137 (53.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 53/180 (29%), Positives = 82/180 (45%)
Query: 371 SAESFASALPSRAAVEANRATA-ELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIA 429
+A F+ ++ E A A E L+ L +GS K AA + L+ EN+ +
Sbjct: 526 AATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLS-IHHENKTKVI 584
Query: 430 KAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTT 489
+AGA+ +L L+ + E +V + NL+ + K I EEG + +V+V+ G +
Sbjct: 585 EAGAVRYLVELMDPAFGMV-EKAVVVLANLATVREGKIAI-GEEGGIPVLVEVVELG-SA 641
Query: 490 EARENAAATLFSLSAVHEYK--KKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTH 547
+ENA A L L H K + E G + L L + GT RGK+ A L H
Sbjct: 642 RGKENATAALLQL-CTHSPKFCNNVIRE-GVIPPLVALTKSGTARGKEKAQNLLKYFKAH 699
Score = 76 (31.8 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQALLFTGT 655
LV ++ G+ RGKENA AALL+LC + V++ + L+ AL +GT
Sbjct: 632 LVEVVELGSARGKENATAALLQLC-THSPKFCNNVIREGVIPPLV-ALTKSGT 682
Score = 45 (20.9 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 603 LVGMMRCGTPRGKENA 618
LV + + GT RGKE A
Sbjct: 674 LVALTKSGTARGKEKA 689
Score = 40 (19.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 603 LVGMMRCGTPRGKENAVAALLEL 625
LV ++ G+ GK++A AL L
Sbjct: 551 LVDLLGSGSLSGKKDAATALFNL 573
Score = 38 (18.4 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 230 EGDAEPTASVLNGFVAIMRY 249
+ DA P+ + NGF + +Y
Sbjct: 57 DSDAAPSELLNNGFEELAQY 76
Score = 38 (18.4 bits), Expect = 5.0e-09, Sum P(3) = 5.0e-09
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 58 NSRSLIRKMEAFLVLLEYLRDSGTCIESTAVLC 90
++R +I + EA L+ L + I++ AV C
Sbjct: 454 DNRIVIARCEAIPSLVSLLYSTDERIQADAVTC 486
Score = 38 (18.4 bits), Expect = 5.0e-09, Sum P(3) = 5.0e-09
Identities = 7/47 (14%), Positives = 22/47 (46%)
Query: 124 SGHFHDLNQEISTLLDVFPADDIELSEDVREQIDLMQRQARNAKLHI 170
+G + E+ L+D + ++ + +I ++ R + + ++ I
Sbjct: 413 TGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVI 459
Score = 37 (18.1 bits), Expect = 6.8e-25, Sum P(3) = 6.8e-25
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 614 GKENAVAALLELCRSGGASATERVLKA 640
G+E + L+E+ G A E A
Sbjct: 624 GEEGGIPVLVEVVELGSARGKENATAA 650
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 271 (100.5 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 68/147 (46%), Positives = 90/147 (61%)
Query: 410 AAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRI 469
AA EIRLL+K ENR IAKAGAI L +L+S+ + QE VTA+LNLS+ D+NK I
Sbjct: 83 AAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLCDENKESI 142
Query: 470 MDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLG 529
G + +V+ L+ G T A+ENAA L LS + E K I SGA+ L LL G
Sbjct: 143 ASS-GAIKPLVRALKMGTPT-AKENAACALLRLSQIEENKVAIG-RSGAIPLLVNLLETG 199
Query: 530 TPRGKKDAVTALFNLSTHTDNCVRMIE 556
R KKDA TAL++L + +N +R ++
Sbjct: 200 GFRAKKDASTALYSLCSAKENKIRAVQ 226
Score = 163 (62.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 51/159 (32%), Positives = 88/159 (55%)
Query: 387 ANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNP 446
A+ + L++ L G+P AK AA + L++ +EN+ I ++GAIP L NLL T
Sbjct: 143 ASSGAIKPLVRALKMGTPTAKENAACALLRLSQI-EENKVAIGRSGAIPLLVNLLETGGF 201
Query: 447 VAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLR-FGLTTEARENAAATLFSLSAV 505
A++++ TA+ +L +NK R + + G + +V+++ FG + + +A + L +V
Sbjct: 202 RAKKDASTALYSLCSAKENKIRAV-QSGIMKPLVELMADFG--SNMVDKSAFVMSLLMSV 258
Query: 506 HEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNL 544
E K I +E G V L ++ +GT R K+ AV+ L L
Sbjct: 259 PESKPAIVEEGG-VPVLVEIVEVGTQRQKEMAVSILLQL 296
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 52/184 (28%), Positives = 83/184 (45%)
Query: 368 TDVSAESFASALPSRAAVEANRATA------ELLIQQLANGSPRAKTVAAREIRLLAKTG 421
T + E+ A AL + +E N+ LL+ L G RAK A+ + L +
Sbjct: 159 TPTAKENAACALLRLSQIEENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLC-SA 217
Query: 422 KENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVK 481
KEN+ ++G + L L++ + S M L ++K I+ EEG + +V+
Sbjct: 218 KENKIRAVQSGIMKPLVELMADFGSNMVDKSAFVMSLLMSVPESKPAIV-EEGGVPVLVE 276
Query: 482 VLRFGLTTEARENAAATLFSLSAVHE-YKKKIADESGAVEALATLLRLGTPRGKKDAVTA 540
++ G T +E A + L L Y+ +A E GA+ L L + GT R K+ A A
Sbjct: 277 IVEVG-TQRQKEMAVSILLQLCEESVVYRTMVARE-GAIPPLVALSQAGTSRAKQKA-EA 333
Query: 541 LFNL 544
L L
Sbjct: 334 LIEL 337
Score = 68 (29.0 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 21/49 (42%), Positives = 25/49 (51%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASAT--ERVLKAPALVGLLQA 649
LV ++ GT R KE AV+ LL+LC T R P LV L QA
Sbjct: 274 LVEIVEVGTQRQKEMAVSILLQLCEESVVYRTMVAREGAIPPLVALSQA 322
Score = 50 (22.7 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCR------SGGASATERV 637
LV + + GT R K+ A AL+EL R +GGA ++ ++
Sbjct: 316 LVALSQAGTSRAKQKA-EALIELLRQPRSISNGGARSSSQL 355
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 273 (101.2 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 81/193 (41%), Positives = 105/193 (54%)
Query: 365 PETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSP-RAKTVAAREIRLLAKTGKE 423
P TT +ES L AV+ + LI L + S + AA EIRLL+K E
Sbjct: 38 PTTT---SESRQRKLFLSCAVDNSDDVIRNLITHLESSSSIEEQKQAAMEIRLLSKNKPE 94
Query: 424 NRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVL 483
NR +AKAGAI L +L+S+ + QE VTA+LNLS+ D+NK I+ G + +V L
Sbjct: 95 NRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCDENKEMIVSS-GAVKPLVNAL 153
Query: 484 RFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFN 543
R G T +ENAA L LS V E K I SGA+ L LL G R KKDA TAL++
Sbjct: 154 RLGTPT-TKENAACALLRLSQVEENKITIG-RSGAIPLLVNLLENGGFRAKKDASTALYS 211
Query: 544 LSTHTDNCVRMIE 556
L + +N R +E
Sbjct: 212 LCSTNENKTRAVE 224
Score = 148 (57.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/150 (29%), Positives = 81/150 (54%)
Query: 395 LIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVT 454
L+ L G+P K AA + L++ +EN+ I ++GAIP L NLL A++++ T
Sbjct: 149 LVNALRLGTPTTKENAACALLRLSQV-EENKITIGRSGAIPLLVNLLENGGFRAKKDAST 207
Query: 455 AMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIAD 514
A+ +L ++NK+R + E G + +V+++ ++ + +A + L + E K + +
Sbjct: 208 ALYSLCSTNENKTRAV-ESGIMKPLVELM-IDFESDMVDKSAFVMNLLMSAPESKPAVVE 265
Query: 515 ESGAVEALATLLRLGTPRGKKDAVTALFNL 544
E G V L ++ GT R K+ +V+ L L
Sbjct: 266 EGG-VPVLVEIVEAGTQRQKEISVSILLQL 294
Score = 62 (26.9 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASAT--ERVLKAPALVGLLQ 648
LV ++ GT R KE +V+ LL+LC T R P LV L Q
Sbjct: 272 LVEIVEAGTQRQKEISVSILLQLCEESVVYRTMVAREGAVPPLVALSQ 319
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 306 (112.8 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 93/282 (32%), Positives = 139/282 (49%)
Query: 373 ESFASALPSRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAG 432
E+F++ + + E + T +L I L + S K AA ++RLLAK +NR I ++G
Sbjct: 166 ENFSTEIIECISPEDLQPTVKLCIDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESG 225
Query: 433 AIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEAR 492
AI L LL ++P QE++VTA+LNLS++D+NK+ ++ G + S+V VL+ G T ++
Sbjct: 226 AIQALIPLLRCNDPWTQEHAVTALLNLSLHDQNKA-VIAAGGAIKSLVWVLKTGTET-SK 283
Query: 493 ENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCV 552
+NAA L SL+ + E K I GA+ L +LL G+ RGKKDA+T L+ L T N
Sbjct: 284 QNAACALLSLALLEENKGSIG-ACGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKE 342
Query: 553 RMIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPIXXXXXXXXXXXX-TGLVGMMRCGT 611
R + I LV + G+
Sbjct: 343 RAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDGS 402
Query: 612 PRGKENAVAALLELC----RSGGASATERVLKAPALVGLLQA 649
+GKE A+ LL+LC R+ G E + P LVGL Q+
Sbjct: 403 VKGKEFAILTLLQLCSDSVRNRGLLVREGAI--PPLVGLSQS 442
Score = 37 (18.1 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 58 NSRSLIRKMEAFLVLLEYLRDSGTC 82
NS + K EAFL + + D C
Sbjct: 94 NSNASSMKEEAFLDISQAFSDFSAC 118
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 272 (100.8 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 78/267 (29%), Positives = 129/267 (48%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P++ CPI L LM DPVII++GQTY+R I +W +GH TCPKT Q L H L PN ++
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 349 NLIVQWCTAHGI--PYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSPRA 406
LI WC +G+ P PPE+ D++ A ++ + + ++ +
Sbjct: 340 ALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDV------- 392
Query: 407 KTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPV---AQENSVTAMLNLSIYD 463
K V E + + E+ + + LL+T V ++ V + + + D
Sbjct: 393 KVVPLEESGTIKEEACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKD 452
Query: 464 KNKSRI-MDEEGCLGSIVKVLRFGLT---TEARENAAATLFSLSAVHEYKKKIADESGAV 519
++RI M E GC+ ++++ L L A++ A LF+L+ + K++ SG +
Sbjct: 453 DEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGII 512
Query: 520 EALATLLRLGTPRGKKDAVTALF-NLS 545
L +L G +VTA++ NLS
Sbjct: 513 PLLEEMLCNPHSHG---SVTAIYLNLS 536
Score = 64 (27.6 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 33/166 (19%), Positives = 68/166 (40%)
Query: 108 CGQSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPADDIELSEDVREQIDLMQRQARNAK 167
C +SSKL+L + S+ F ++ L +DI + + + Q+ + + N +
Sbjct: 71 CTESSKLYLAITGDSVVLKFEKAKSSLTDSLR--RVEDI-VQQSIGSQLLEILMELENTE 127
Query: 168 LHIDKNDELLRLRLFSFLDE---FEHGRVPNHVDLRSFFVEGLGIKDAKTCRAEIEFLEE 224
+D ++ + ++ L + FE N +++ LGI ++ E L++
Sbjct: 128 FSLDPAEKEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALTERRCLKK 187
Query: 225 QIVNHE-GDAEPTASVLNGFVAIMR-YSRFLLFGFEEDEAELGIGS 268
I D + S++ + +MR YS+ +D G S
Sbjct: 188 LIERARMEDDKRKESIVAYLLHLMRKYSKLFRSEIWDDNDSQGSSS 233
Score = 49 (22.3 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 601 TGLVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKA---PALVGL 646
+ L ++ G P +E AV+ LL LC +E VL+ P+LV +
Sbjct: 636 SNLCTILDTGEPNEQEQAVSLLLILCNHSEI-CSEMVLQEGVIPSLVSI 683
Score = 47 (21.6 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 613 RGKENAVAALLELCRSGGASATERVLKAPALVGLLQALLFTG 654
R E ++A LL L + + + ++ AP+LV L +L TG
Sbjct: 606 RWTEKSLAVLLNLVLN--EAGKDEMVSAPSLVSNLCTILDTG 645
Score = 37 (18.1 bits), Expect = 1.9e-21, Sum P(3) = 1.9e-21
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCR 627
LV + GT RG+E A LL L R
Sbjct: 680 LVSISVNGTQRGRERA-QKLLTLFR 703
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 281 (104.0 bits), Expect = 6.1e-22, P = 6.1e-22
Identities = 83/265 (31%), Positives = 137/265 (51%)
Query: 286 LSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNR 345
+ +PK+F C + +M +P++I++GQT+++ I W++ RTCP+T Q+L H ++PN
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVLYHRFMIPNH 121
Query: 346 ALRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLAN-GSP 404
+ +I +WC H +D P+T+D + F L S L+Q++++ S
Sbjct: 122 LINEVIKEWCLIHN--FDRPKTSDEVIDLFTGDLES-------------LLQRISSPSSV 166
Query: 405 RAKTVAAREIRLLAKTGKENRA-FIAKA-GAIPHLRNLLSTH---NPVAQENSVTAMLNL 459
+T AA+E+ L AK F+AK +I L LS NP EN VTA+
Sbjct: 167 EDQTEAAKELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIF 226
Query: 460 SIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAV 519
S +KNK+ + + L + K ++ G T R ++AAT+ SLS + K I S +
Sbjct: 227 STSEKNKTLVAENPLVLPLLAKYMKQG-TVLTRIHSAATVNSLSYT-DSNKIIIGNSEVL 284
Query: 520 EALATLLRLGTPRGKKDAVTALFNL 544
+AL ++ G +A +AL NL
Sbjct: 285 KALIHVIEEGDSLATSEAFSALSNL 309
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 279 (103.3 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 91/294 (30%), Positives = 141/294 (47%)
Query: 264 LGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWME 323
L I KKR++ E + + +PK+F C + +M DPVII +GQTY++R I W+
Sbjct: 55 LKIVESKKRKR-----ESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN 109
Query: 324 EGHRTCPKTGQMLVHDRLVPNRALRNLIVQWCTAHGIPYDPPETTDVS--AESFASALPS 381
TCP Q+L L PN + LI +WC A+ P+ +D+ E F + S
Sbjct: 110 HD-LTCPTAKQVLYRVCLTPNHLINELITRWCLANKYDRPAPKPSDIDYVTELFTDGIES 168
Query: 382 RAAVEANRATAELLIQQLANGSPRA--KTVAAREIRLLAKTGKENRAFIAKA--GAIPHL 437
L+Q++++ S +T AA+E+ L + R F K +I L
Sbjct: 169 -------------LLQRISSPSSSVADQTEAAKELALQTEKFVNVRDFFIKELPDSITRL 215
Query: 438 RNLLST------HNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEA 491
LS NP QEN VTA+ N+S ++KNK+ + + + + K ++ G +
Sbjct: 216 LTPLSVLGDEVDSNPELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQG-SVVT 274
Query: 492 RENAAATLFSLSAVHEYKKKIADESGAVEALATLL-RLGTPRGKKDAVTALFNL 544
R NA TL SLS + + K I S A++AL L+ L DA+ A+ +L
Sbjct: 275 RRNATLTLASLSDI-DSNKIIIGNSVALKALIDLIGELDDLSATHDALCAVIDL 327
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 273 (101.2 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 83/271 (30%), Positives = 128/271 (47%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P++ CPI L LM DPVII++GQTY+R I +W +GH TCPKT Q L H L PN ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 349 NLIVQWCTAHG--IPYDPPETTDVSAESFA-SALPSRAAVEANR-ATAELLIQQLANGSP 404
LI WC +G IP PPE+ D+ A S S + N + +L ++
Sbjct: 333 GLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVPLEE 392
Query: 405 RAKTVAAR---EIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSI 461
TV R E ++ E + I L +L+ + ++ V + L +
Sbjct: 393 NGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRLLL 452
Query: 462 YDKNKSRIMDEEGCLGSIVKVLRF-GLTTE-----ARENAAATLFSLSAVHEYKKKIADE 515
D ++RI G G + +LRF G + A+++ A LF+L+ + K++
Sbjct: 453 KDDEEARIF--MGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLT 510
Query: 516 SGAVEALATLLRLGTPRGKKDAVTALF-NLS 545
SG + L ++ G + TAL+ NLS
Sbjct: 511 SGVIRLLEKMISSAESHG---SATALYLNLS 538
Score = 139 (54.0 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 45/149 (30%), Positives = 73/149 (48%)
Query: 407 KTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLST----HNPVAQENSVTAMLNLSIY 462
K +IRLL K +E R F+ G + L L + +N AQ++ A+ NL++
Sbjct: 441 KCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVN 500
Query: 463 DKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEAL 522
+ +M G + + K++ + E+ +A A +LS + E K I S AV L
Sbjct: 501 NNRNKELMLTSGVIRLLEKMIS---SAESHGSATALYLNLSCLDEAKSVIGS-SQAVPFL 556
Query: 523 ATLLRLGTP-RGKKDAVTALFNLSTHTDN 550
LL+ + K DA+ AL+NLST++ N
Sbjct: 557 VQLLQKEIETQCKLDALHALYNLSTYSPN 585
Score = 49 (22.3 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 601 TGLVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKA---PALVGL 646
+ L ++ G +E AV+ LL LC +G S + VL+ P+LV +
Sbjct: 639 SSLATVLDMGDTTEQEQAVSCLLILC-NGRESCIQMVLQEGVIPSLVSI 686
Score = 41 (19.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 603 LVGMMRCGTPRGKENAVAALL 623
LV + GTPRG+E + L+
Sbjct: 683 LVSISVNGTPRGREKSQKLLM 703
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 25/106 (23%), Positives = 42/106 (39%)
Query: 253 LLFGFEEDEAELGIGSHKKRRKGLITQEIAETFLSIPKDF-CCPIMLDLMR----DPVI- 306
+L FE+ A++ + KR + ++ I L I + MLD D +I
Sbjct: 86 VLLKFEK--AKIALIDGLKRVEDIVPSSIGSQILEIVGELENTRFMLDPSEKEVGDQIIA 143
Query: 307 -ISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALRNLI 351
+ G+ +D + +E HR + L RAL+ LI
Sbjct: 144 LLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALAERRALKKLI 189
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 256 (95.2 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 85/274 (31%), Positives = 124/274 (45%)
Query: 286 LSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNR 345
+ IP F CPI LDLM DPV ISTGQTYDR SI W+ G+ TCP T L L+PN
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNH 71
Query: 346 ALRNLIVQWCTAH---GIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANG 402
LR LI +WC A+ G+ P S S L +A+
Sbjct: 72 TLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHV------------ 119
Query: 403 SPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLL-------STHNPVAQENSVTA 455
S R++ A R +R LA+ ++NR IA A L +L S + + E S+
Sbjct: 120 SVRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSE-SLAL 178
Query: 456 MLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATL-FSLSAVHEYKKK--I 512
++ L + + + + +G + ++L F + E R NAAA + L+ K I
Sbjct: 179 LVLLHMTETECEAVASDPSRVGFMTRLL-FDSSIEIRVNAAALIEMVLTGAKSMDLKLII 237
Query: 513 ADESGAVEALATLLR--LGTPRGKKDAVTALFNL 544
+ E + LL+ + + R K + A+F L
Sbjct: 238 SGSDSIFEGVLDLLKNPISSRRALKIGIKAIFAL 271
Score = 46 (21.3 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 613 RGKENAVAALLELCRSGGASATERVLKAPALVGLLQALL 651
R E A ALL LC +A ER A GL+ LL
Sbjct: 343 RATEYAAGALLALC-----TAEERCRDEAAAAGLVTQLL 376
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 260 (96.6 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 84/272 (30%), Positives = 126/272 (46%)
Query: 286 LSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRT-CPKTGQMLVHDRLVPN 344
+ IP F CPI L+LM+DPV + TGQTYDR SI W+ G+ T CP T L L+PN
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71
Query: 345 RALRNLIVQWCTAH---GIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLAN 401
LR LI +WC A+ G+ P S + L +A+
Sbjct: 72 HTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHV----------- 120
Query: 402 GSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLL---STHNPVAQENSVTAMLN 458
S R++ A R +R A+ +NR IA A L +L +T + + E S+ ++
Sbjct: 121 -SVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSE-SLALLVM 178
Query: 459 LSIYDKNKS-RIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSA---VHEYKKKIAD 514
L I + N+ I + G + + ++L F + E R NAAA + +S + K I++
Sbjct: 179 LPITEPNQFVSISSDPGRVEFLTRLL-FDSSIETRVNAAALIEIVSTGTKSADLKGSISN 237
Query: 515 ESGAVEALATLLR--LGTPRGKKDAVTALFNL 544
E + LLR + + R K + LF L
Sbjct: 238 SESVFEGVLDLLRNPISSRRALKIGIKTLFAL 269
Score = 39 (18.8 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 613 RGKENAVAALLELCRSGGASATERVLKAPALVGLLQALL 651
R E A ALL LC +A ER + A G++ LL
Sbjct: 341 RATEYAAGALLALC-----TAEERWREEAAGAGVVVQLL 374
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 261 (96.9 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 78/270 (28%), Positives = 131/270 (48%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P++ CPI L LM DPVII++GQTY+R I +W +GH +CPKT Q L H L PN ++
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 349 NLIVQWCTAHGI--PYDPPETTDVSAESFA---SALPSRAAVEA-NRATA-ELLIQQLAN 401
LI WC +GI P PPE+ D++ A S P+ +V++ T ++ + L
Sbjct: 336 GLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEE 395
Query: 402 GSPRAKTVAA-REIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLS 460
S T+ + R+ + E + I + ++ +A++ V + +
Sbjct: 396 SS----TIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVVENVRIL 451
Query: 461 IYDKNKSRI-MDEEGCLGSIVKVLRFGL---TTEARENAAATLFSLSAVHEYKKKIADES 516
+ D ++RI M G + + ++ L + A+E A LF+L+ + K++ S
Sbjct: 452 LKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTS 511
Query: 517 GAVEALATLLRLGTPRGKKDAVTALF-NLS 545
G + L ++ +G TAL+ NLS
Sbjct: 512 GVIPLLEKMISCSQSQGP---ATALYLNLS 538
Score = 39 (18.8 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 695 NRDSSFTPDVSVPMSISVPV 714
N++ + VS PM+I PV
Sbjct: 716 NKEEAPRKTVSAPMAIPAPV 735
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 178 (67.7 bits), Expect = 5.8e-18, Sum P(3) = 5.8e-18
Identities = 60/219 (27%), Positives = 99/219 (45%)
Query: 414 IRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEE 473
+R + ++ ++ R + + LR+LL + + Q N+ +++NLS+ +NK +I+
Sbjct: 258 LRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAASVVNLSLEKQNKVKIV-RS 316
Query: 474 GCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLG-TPR 532
G + ++ VL+ G TTEA+E+ A LFSL A+ + K + GAVE L LR + R
Sbjct: 317 GFVPLLIDVLKSG-TTEAQEHVAGALFSL-ALEDENKMVIGVLGAVEPLLHALRSSESER 374
Query: 533 GKKDAVTALFNLSTHTDNCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPIXXXX 592
++DA AL++LS N R++ P
Sbjct: 375 ARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRILLVLCNLAACPDGKGA 434
Query: 593 XXXXXXXXTGLVGMMR-CG---TPRGKENAVAALLELCR 627
LVG +R G + +EN VA LL LC+
Sbjct: 435 MLDGNAVAI-LVGKLREVGGGDSEAARENCVAVLLTLCQ 472
Score = 124 (48.7 bits), Expect = 5.8e-18, Sum P(3) = 5.8e-18
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P +F CPI LM DPV++S+GQT++R S+ G+ G ++PN A++
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAMK 91
Query: 349 NLIVQWCTAHGIPYD-PPETTDV 370
+ I WC + + PP+ V
Sbjct: 92 STIFSWCDRQKVDHPRPPDAAYV 114
Score = 103 (41.3 bits), Expect = 7.3e-10, Sum P(3) = 7.3e-10
Identities = 50/181 (27%), Positives = 83/181 (45%)
Query: 367 TTDVSAESFASALPSRAAVEANR------ATAELLIQQLANG-SPRAKTVAAREIRLLAK 419
TT+ E A AL S A + N+ E L+ L + S RA+ AA + L+
Sbjct: 330 TTEAQ-EHVAGALFSLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSL 388
Query: 420 TGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSI 479
NR + +AGA+P L +++ + + ++ + + NL+ K ++D + +
Sbjct: 389 I-PSNRTRLVRAGAVPTLLSMVRSGDSTSR--ILLVLCNLAACPDGKGAMLDGNA-VAIL 444
Query: 480 VKVLRF---GLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKD 536
V LR G + AREN A L +L + + +A E+GA E L + G R K+
Sbjct: 445 VGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEENGNERVKEK 504
Query: 537 A 537
A
Sbjct: 505 A 505
Score = 98 (39.6 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 43/162 (26%), Positives = 79/162 (48%)
Query: 368 TDVSAESFASALPSRAAVEANRAT-AELLIQQLANGSPRAKTVAAREIRLLAKTGKENRA 426
T+ +A +L + V+ R+ LLI L +G+ A+ A + LA EN+
Sbjct: 294 TNAAASVVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALED-ENKM 352
Query: 427 FIAKAGAI-PHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRF 485
I GA+ P L L S+ + A++++ A+ +LS+ N++R++ G + +++ ++R
Sbjct: 353 VIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLV-RAGAVPTLLSMVRS 411
Query: 486 GLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLR 527
G +T L +L+A + K + D AV L LR
Sbjct: 412 GDSTS---RILLVLCNLAACPDGKGAMLD-GNAVAILVGKLR 449
Score = 39 (18.8 bits), Expect = 5.8e-18, Sum P(3) = 5.8e-18
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 610 GTPRGKENAVAALLELCRSGGASATE 635
G R KE A LL + R GG +E
Sbjct: 497 GNERVKEKASKILLAM-RGGGGGESE 521
>TAIR|locus:1005716696 [details] [associations]
symbol:AT1G08315 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 SMART:SM00185 EMBL:CP002684
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
UniGene:At.42266 UniGene:At.48169 EMBL:AK229288 IPI:IPI00546916
RefSeq:NP_849613.1 ProteinModelPortal:Q0WNZ8 SMR:Q0WNZ8
PRIDE:Q0WNZ8 EnsemblPlants:AT1G08315.1 GeneID:837352
KEGG:ath:AT1G08315 TAIR:At1g08315 eggNOG:NOG245502
InParanoid:Q0WNZ8 OMA:VAQVAGC PhylomeDB:Q0WNZ8
ProtClustDB:CLSN2690788 Genevestigator:Q0WNZ8 Uniprot:Q0WNZ8
Length = 325
Score = 205 (77.2 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 56/175 (32%), Positives = 95/175 (54%)
Query: 387 ANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNP 446
A R T ++ +L++ S + + A E+RL++K ++R IA AGAIP+L L + +
Sbjct: 4 AKRRTMSTIVSRLSSVSEQTRAAALAELRLISKQDPDSRLIIADAGAIPYLAETLYSSSH 63
Query: 447 VAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTE---ARENAAATLFSLS 503
+QEN+ +LNLSI ++ +M G L ++ LR TT A +++AAT++SL
Sbjct: 64 SSQENAAATLLNLSI--TSREPLMSSRGLLDALSHALRHHDTTTSPAAVQSSAATIYSLL 121
Query: 504 AVHE-YKKKIADESGAVEALATLLRL--GTPRGKKDAVTALFNLSTHTDNCVRMI 555
E Y+ I + + +L ++R PR KD++ ALF ++ + N MI
Sbjct: 122 IAEESYRPIIGSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRSTMI 176
Score = 70 (29.7 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 17/30 (56%), Positives = 19/30 (63%)
Query: 613 RGKENAVAALLELCRSGGASATERVLKAPA 642
R KEN+V ALL L R GGA+A V A A
Sbjct: 239 RIKENSVGALLNLARCGGAAARSEVAAAVA 268
Score = 37 (18.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 11/48 (22%), Positives = 19/48 (39%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQAL 650
L+ + RCG + AA+ G V + +L G +A+
Sbjct: 248 LLNLARCGGAAARSEVAAAVASGADEGAMEGIVYVAENGSLKGRKKAV 295
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 158 (60.7 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 45/164 (27%), Positives = 83/164 (50%)
Query: 393 ELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENS 452
E L+ +L + A IR + + + +R + I L++L+ + Q N
Sbjct: 231 EALLTKLKSNRISEIEEALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNV 290
Query: 453 VTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKI 512
++NLS+ NK +I+ G + ++ VL+ G + EA+E++A +FSL+ E K I
Sbjct: 291 TAVLVNLSLEKSNKVKIV-RSGIVPPLIDVLKCG-SVEAQEHSAGVIFSLALEDENKTAI 348
Query: 513 ADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
G +E L L+R+GT + D+ AL++LS N ++++
Sbjct: 349 G-VLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVK 391
Score = 133 (51.9 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 39/133 (29%), Positives = 58/133 (43%)
Query: 284 TFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVP 343
T IP +F CPI LM DP+I+S+G +Y+R + G P V +P
Sbjct: 54 TKTEIPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPPDFSTV----IP 109
Query: 344 NRALRNLIVQWCTAHGIPYDPPETTD-VSAESFASALPSRAAVEANRATAELLIQQLANG 402
N AL++ I WC P PP+ + +AE AL + + +E + Q
Sbjct: 110 NLALKSAIHSWCERRCFP--PPKPLNSAAAEKLILALMEKKPQRRKVSVSEKELIQAIRD 167
Query: 403 SPRAK-TVAAREI 414
P + AA E+
Sbjct: 168 KPSVRLNHAATEL 180
Score = 125 (49.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 35/113 (30%), Positives = 63/113 (55%)
Query: 422 KENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVK 481
K N+ I ++G +P L ++L + AQE+S + +L++ D+NK+ I G L ++
Sbjct: 301 KSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKTAI-GVLGGLEPLLH 359
Query: 482 VLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGK 534
++R G T R ++A L+ LS V + K+ + GAV+ L ++ LG G+
Sbjct: 360 LIRVG-TELTRHDSALALYHLSLVQSNRGKLV-KLGAVQMLLGMVSLGQMIGR 410
Score = 80 (33.2 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 422 KENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVK 481
+ NR + K GA+ L ++S + + + + N++ ++ ++D G + +V
Sbjct: 383 QSNRGKLVKLGAVQMLLGMVSLGQMIGRV--LLILCNMASCPVSRPALLDSGG-VECMVG 439
Query: 482 VLRFG--LTTEARENAAATLFSLSAVHEYK-KKIADESGAVEALATLLRLGTPRGKKDA 537
VLR + RE+ A L+ LS + K +A + AVE L + R G R K+ A
Sbjct: 440 VLRRDREVNESTRESCVAVLYGLSHDGGLRFKGLAMAANAVEELVKVERSGRERAKQKA 498
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 5/23 (21%), Positives = 14/23 (60%)
Query: 603 LVGMMRCGTPRGKENAVAALLEL 625
L+ +++CG+ +E++ + L
Sbjct: 316 LIDVLKCGSVEAQEHSAGVIFSL 338
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 165 (63.1 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 45/145 (31%), Positives = 80/145 (55%)
Query: 413 EIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDE 472
++R ++ + R + + LR+L+ + + Q N+ +++NLS+ NK +I+
Sbjct: 206 QLRKTTRSNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIV-R 264
Query: 473 EGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLG-TP 531
G + ++ VL+ G +TEA+E+ LFSL AV E K + GAVE L LR +
Sbjct: 265 SGFVPLLIDVLKSG-STEAQEHVIGALFSL-AVEEENKMVIGVLGAVEPLLHALRSSESE 322
Query: 532 RGKKDAVTALFNLSTHTDNCVRMIE 556
R ++DA AL++LS +N R+++
Sbjct: 323 RARQDAALALYHLSLIPNNRSRLVK 347
Score = 115 (45.5 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P +F CPI LM DPV++++GQT++R S+ G ++PN A++
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLSTVIPNLAMK 70
Query: 349 NLIVQWCTAHGIPYD-PPE 366
+ I+ WC + + + PP+
Sbjct: 71 STILSWCDRNKMEHPRPPD 89
Score = 107 (42.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 394 LLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAI-PHLRNLLSTHNPVAQENS 452
LLI L +GS A+ + LA +EN+ I GA+ P L L S+ + A++++
Sbjct: 270 LLIDVLKSGSTEAQEHVIGALFSLA-VEEENKMVIGVLGAVEPLLHALRSSESERARQDA 328
Query: 453 VTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKI 512
A+ +LS+ N+SR++ + G + ++ ++R G E+ L +L+A E K +
Sbjct: 329 ALALYHLSLIPNNRSRLV-KAGAVPMMLSMIRSG---ESASRILLLLCNLAACSEGKGAM 384
Query: 513 ADESGAVEALATLLR 527
D AV L LR
Sbjct: 385 LD-GNAVSILVGKLR 398
Score = 98 (39.6 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 50/185 (27%), Positives = 85/185 (45%)
Query: 373 ESFASALPSRAAVEANR------ATAELLIQQLANG-SPRAKTVAAREIRLLAKTGKENR 425
E AL S A E N+ E L+ L + S RA+ AA + L+ NR
Sbjct: 284 EHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLI-PNNR 342
Query: 426 AFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRF 485
+ + KAGA+P + +++ + ++ + + NL+ + K ++D + +V LR
Sbjct: 343 SRLVKAGAVPMMLSMIRSGESASR--ILLLLCNLAACSEGKGAMLDGNA-VSILVGKLRE 399
Query: 486 --GLTTEA--RENAAATLFSLSAVHEYKKKIADESGAVEALATLLRL--GTPRGKKDAVT 539
G ++A REN L +LS + + +A E+GA E L ++ G+ R K+ A
Sbjct: 400 SGGAESDAAARENCVGALLTLSVGNMRFRGLASEAGAEEILTEIVESESGSGRLKEKASK 459
Query: 540 ALFNL 544
L L
Sbjct: 460 ILQTL 464
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 189 (71.6 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 66/191 (34%), Positives = 100/191 (52%)
Query: 363 DPPETTDVSAESFASALPSRAAVEANRATAELLI----QQLANGSPRAKTVAAREIR-LL 417
D T ++S E A + T ELLI ++L +G + AA+EIR LL
Sbjct: 17 DSTVTANISEEDEAE---EETTTNTWKTTKELLILHLSKKLLHGDLDFRIEAAKEIRKLL 73
Query: 418 AKTGKEN--RAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIY-DKNKSRIMDEEG 474
K+ ++ R+ +A AG IP L +L + N A+ S+ A+LNL++ ++NK I+ + G
Sbjct: 74 RKSPVKSSARSKLADAGVIPPLVPMLFSSNVDARHASLLALLNLAVRNERNKIEIV-KAG 132
Query: 475 CLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGK 534
+ ++++L+ RE A A + +LSA K I SG L +L GT +GK
Sbjct: 133 AVPPLIQILKLH-NASLRELATAAILTLSAAPANKAMIIS-SGVPPLLIQMLSSGTVQGK 190
Query: 535 KDAVTALFNLS 545
DAVTAL NLS
Sbjct: 191 VDAVTALHNLS 201
Score = 143 (55.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/176 (28%), Positives = 85/176 (48%)
Query: 380 PSRAAVEANRATAEL---LIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPH 436
P +++ + A A + L+ L + + A+ + + LA + N+ I KAGA+P
Sbjct: 77 PVKSSARSKLADAGVIPPLVPMLFSSNVDARHASLLALLNLAVRNERNKIEIVKAGAVPP 136
Query: 437 LRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAA 496
L +L HN +E + A+L LS NK+ I+ G ++++L G T + + +A
Sbjct: 137 LIQILKLHNASLRELATAAILTLSAAPANKAMIISS-GVPPLLIQMLSSG-TVQGKVDAV 194
Query: 497 ATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGK-KDAVTALFNLS-THTDN 550
L +LSA EY I D AV L LL+ K + TAL + +H+++
Sbjct: 195 TALHNLSACKEYSAPILDAK-AVYPLIHLLKECKKHSKFAEKATALVEMILSHSED 249
Score = 80 (33.2 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQALLFTGT 655
LV + G+P E+AV ALL LCRS + +LK A+ GLL + + GT
Sbjct: 264 LVETVEDGSPLSIEHAVGALLSLCRSDRDKYRKLILKEGAIPGLLSSTV-DGT 315
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 216 (81.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/79 (49%), Positives = 52/79 (65%)
Query: 283 ETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLV 342
E+ ++IP +F CPI +DLM+DPVIISTG TYDR SI W+ G++TCP T +L +
Sbjct: 26 ESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQI 85
Query: 343 PNRALRNLIVQWCTAHGIP 361
PN +R +I WC G P
Sbjct: 86 PNHTIRKMIQGWCVEKGSP 104
Score = 51 (23.0 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 492 RENAAATLFSLSAVHEYK-KKIADESGAVEALATLLRLGTPRGK-KDAVTALFNL 544
R+NAA + + ++ E + A E+G EAL L+R K ++ A++ +
Sbjct: 229 RQNAAFIMKEILSLDETRVHSFAVENGVAEALVKLIRDSVSSSSTKSSLIAIYQM 283
Score = 50 (22.7 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 18/96 (18%), Positives = 45/96 (46%)
Query: 421 GKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMD-EEGCLGSI 479
G E + +A A + + LL + + ++N+ M + D+ + E G ++
Sbjct: 201 GLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEAL 260
Query: 480 VKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADE 515
VK++R +++ + +++ ++ + K +IA E
Sbjct: 261 VKLIRDSVSSSSTKSSLIAIYQMVL---QKPEIASE 293
Score = 39 (18.8 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 382 RAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTG 421
R V N LL++++A S A + I L KTG
Sbjct: 332 REEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTG 371
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 192 (72.6 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 63/193 (32%), Positives = 103/193 (53%)
Query: 363 DPPETTDVSAESFASALPSRAAVE---ANRATAELLIQQLANGSPRAKTVAAREIRLLAK 419
D P DV E +A+ ++V ++ A+ + ++ + + ++ AA+EIR L K
Sbjct: 34 DSPRGGDVDHELLHTAVSVSSSVSVSSSSSASIQRVLSLIRSEDCDSRLFAAKEIRRLTK 93
Query: 420 TGKENRAFIAKAGAIPHLRNLLSTHNPVAQ-ENSVTAMLNLSIYD-KNKSRIMDEEGCLG 477
T R ++A + L ++L +P + E ++ A+LNL++ D KNK I+ E G L
Sbjct: 94 TSHRCRRHFSQA--VEPLVSMLRFDSPESHHEAALLALLNLAVKDEKNKVSII-EAGALE 150
Query: 478 SIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDA 537
I+ L+ T +E A+A+L +LSA K I +G V L +++ G+P+ K DA
Sbjct: 151 PIINFLQSNSPT-LQEYASASLLTLSASAN-NKPIIGANGVVPLLVKVIKHGSPQAKADA 208
Query: 538 VTALFNLSTHTDN 550
V AL NLST DN
Sbjct: 209 VMALSNLSTLPDN 221
Score = 72 (30.4 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQALLFTGT 655
+V ++ G+ + +E+AV LL LC+S + E +L+ + GLL+ L GT
Sbjct: 279 VVEVLENGSLQAREHAVGVLLTLCQSDRSKYREPILREGVIPGLLE-LTVQGT 330
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 205 (77.2 bits), Expect = 8.3e-15, Sum P(3) = 8.3e-15
Identities = 38/89 (42%), Positives = 54/89 (60%)
Query: 267 GSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGH 326
GS K+ +T E ++IP F CPI +LM+DPVII++G TYDR +I +W E G+
Sbjct: 12 GSVSKKEIIPVTSCSEEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGY 71
Query: 327 RTCPKTGQMLVHDRLVPNRALRNLIVQWC 355
+TCP T +L +PN +R +I WC
Sbjct: 72 QTCPVTNTVLTSLEQIPNHTIRRMIQGWC 100
Score = 53 (23.7 bits), Expect = 8.3e-15, Sum P(3) = 8.3e-15
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 615 KENAVAALLELCRSGGASATERVLKAPA---LVGLLQALLFTGT 655
K++ V+ + ++C+SG S E L+ A LV +LQ GT
Sbjct: 350 KKDLVSVMWKVCKSGDGSEVEEALRLGAFKKLVVMLQVGCGEGT 393
Score = 42 (19.8 bits), Expect = 8.3e-15, Sum P(3) = 8.3e-15
Identities = 19/80 (23%), Positives = 29/80 (36%)
Query: 471 DEEGCLGSIVKVLRFGLTTE-----ARENAAATLFSL--SAVHEYKKKIADESGAVEALA 523
D C+ + K+ R G +E +EN A + + A E V L
Sbjct: 138 DYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLT 197
Query: 524 TLLRLGTPRGKKDAVTALFN 543
+L +G K T+ FN
Sbjct: 198 WMLPIGLEGQSKLTTTSSFN 217
Score = 42 (19.8 bits), Expect = 8.3e-15, Sum P(3) = 8.3e-15
Identities = 32/131 (24%), Positives = 56/131 (42%)
Query: 402 GSPRAKTVAA--REIRLLAKTGKENRAFIAKAGAIPHLRNLLSTH-NPVAQENSVTAMLN 458
G + T ++ R + LL + G +N AF+ K L L TH + + + N V
Sbjct: 206 GQSKLTTTSSFNRLVELL-RNGDQNAAFLIK-----ELLELNVTHVHALTKINGVQEAFM 259
Query: 459 LSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGA 518
SI N+ + C+ S++ + LT + E + L L V+ + + D +
Sbjct: 260 KSI---NR-----DSTCVNSLISIHHMILTNQ--ETVSRFL-ELDLVNITVEMLVDSENS 308
Query: 519 V-EALATLLRL 528
V E T+L +
Sbjct: 309 VCEKALTVLNV 319
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 215 (80.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 76/247 (30%), Positives = 122/247 (49%)
Query: 287 SIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRA 346
++P F CPI LD+M+ PV +STG TYDR SI RW+++G+ TCP T Q+L + VPN
Sbjct: 10 TVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLT 69
Query: 347 LRNLIVQWCTAHGIPYDP--PETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSP 404
L LI W + D PE+ + + +A+ R +E N A +++L + A S
Sbjct: 70 LHRLIDHWSDSINRRADSESPESDTPTRDEINAAI-ERFRIE-NDARSKIL--RFARESD 125
Query: 405 RAKTVAAREIRLLAKTGKENRAFIAK-AGAIPHLRNLLSTHNPVAQEN-SVTAMLNLSIY 462
RE LA GK++ F+A I RN + + E + +M+ I+
Sbjct: 126 EN-----REF--LA--GKDD--FVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIF 174
Query: 463 DKNK-SRIMDEEG--CLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAV 519
D+ + S ++ G CL S +++ G + + + +A L ++ E K IA G V
Sbjct: 175 DRRRLSNLILTNGGDCLTSFFLLIKRG-NPKLKIDCSAVLEFIAVDAESKLIIAKGEGLV 233
Query: 520 EALATLL 526
+ L+
Sbjct: 234 TEIIKLI 240
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 215 (80.7 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 45/134 (33%), Positives = 70/134 (52%)
Query: 286 LSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHR-TCPKTGQMLVHDRLVPN 344
+ IP F CPI LD+M+DPVI+STG TYDR SI +W+ G + +CP T Q++ L PN
Sbjct: 5 IEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPN 64
Query: 345 RALRNLIVQWCT---AHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQLAN 401
LR LI WCT ++GI P + + ++ N+ ++Q+ +
Sbjct: 65 HTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVS 124
Query: 402 -GSPRAKTVAAREI 414
+ + + A E+
Sbjct: 125 ENTTNKRCLEAAEV 138
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 154 (59.3 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 42/143 (29%), Positives = 80/143 (55%)
Query: 414 IRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEE 473
+R + +T E R + + L+N++ + + Q N++ +++NLS+ KNK I+
Sbjct: 248 MRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTIV-RL 306
Query: 474 GCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLG-TPR 532
G + ++ VL+ G + EA+E+AA T+FSLS + K I GA++ L LR + R
Sbjct: 307 GFVPILIDVLKSG-SREAQEHAAGTIFSLSLEDDNKMPIG-VLGALQPLLHALRAAESDR 364
Query: 533 GKKDAVTALFNLSTHTDNCVRMI 555
+ D+ AL++L+ + N +++
Sbjct: 365 TRHDSALALYHLTLNQTNRSKLV 387
Score = 112 (44.5 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRR--SIARWMEEGHRTCPKTGQMLVHDRLVPNRA 346
P +F CPI +M DPV++S+GQT++R + R + + + ++PN
Sbjct: 34 PVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIPKLNDDEESLPDFSNIIPNLN 93
Query: 347 LRNLIVQWCTAHGIPY-DPPETTDVSAESFASALPSRAAVEANRATAELLIQQLANGSP 404
+++ I WC G+ PP+ + V +P VE R + + L++ +A+ +P
Sbjct: 94 MKSTIDTWCDTVGVSRPQPPDYSTVE-RILRQQMPP-PDVEI-RVSEQELLRAVAHRAP 149
Score = 98 (39.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 35/123 (28%), Positives = 61/123 (49%)
Query: 424 NRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVL 483
NR+ + + GA+P L +++ + ++ ++ + NL+ + +S ++D + +V L
Sbjct: 382 NRSKLVRLGAVPALFSMVRSGESASR--ALLVICNLACCSEGRSAMLDANA-VAILVGKL 438
Query: 484 RFGLTTE---------ARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGK 534
R T E AREN A LF+LS K +A E+ AVE L + GT R +
Sbjct: 439 REEWTEEPTEARSSSSARENCVAALFALSHESLRFKGLAKEARAVEVLKEVEERGTERAR 498
Query: 535 KDA 537
+ A
Sbjct: 499 EKA 501
Score = 85 (35.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 40/160 (25%), Positives = 76/160 (47%)
Query: 394 LLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAI-PHLRNLLSTHNPVAQENS 452
+LI L +GS A+ AA I L+ +N+ I GA+ P L L + + + +S
Sbjct: 311 ILIDVLKSGSREAQEHAAGTIFSLSLED-DNKMPIGVLGALQPLLHALRAAESDRTRHDS 369
Query: 453 VTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKI 512
A+ +L++ N+S+++ G + ++ ++R G E+ A + +L+ E + +
Sbjct: 370 ALALYHLTLNQTNRSKLV-RLGAVPALFSMVRSG---ESASRALLVICNLACCSEGRSAM 425
Query: 513 ADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCV 552
D + AV L LR +A ++ S+ +NCV
Sbjct: 426 LD-ANAVAILVGKLREEWTEEPTEARSS----SSARENCV 460
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 210 (79.0 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 73/245 (29%), Positives = 117/245 (47%)
Query: 283 ETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLV 342
ET++++P F CPI LD+MR PV + TG TYDR SI RW++ G+ TCP T Q+L V
Sbjct: 7 ETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFV 66
Query: 343 PNRALRNLIVQWCTAHGIPY--DPPETTDVSAESFASALPSRAAVEANRATAELLIQQLA 400
PN L+ LI W + G + D P S +P++ E N +L+++L
Sbjct: 67 PNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGRE----VPTKE--EVN-----VLLERLM 115
Query: 401 NGSPRAKTVAAREIRLLAKTGKENRAFIAKAGA-IPHLRNLLSTHNPVAQENSVTAMLNL 459
+ K V K NR F++K +P L +++ T + + +
Sbjct: 116 SLENLMKIVR------FVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILD 169
Query: 460 SI-YDKNK-SRIM---DEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIAD 514
SI D+ + S +M D CL +I+ ++ G E++ + L +S + K IA+
Sbjct: 170 SIKVDRERLSNLMLANDGGDCLTAILLAIQRG-NLESKIESVRVLDWISFDAKSKLMIAE 228
Query: 515 ESGAV 519
G +
Sbjct: 229 RDGVL 233
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 187 (70.9 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 38/85 (44%), Positives = 52/85 (61%)
Query: 271 KRRKGLITQEIAETFL-SIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTC 329
+++K + + I+E L IP F CPI L+ M+DPV + TGQTY+R +I +W GH TC
Sbjct: 42 EKKKLDLKEMISELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTC 101
Query: 330 PKTGQMLVHDRLVPNRALRNLIVQW 354
P T Q L D + PN+ L LI W
Sbjct: 102 PTTMQELWDDLVTPNKTLHQLIYTW 126
Score = 62 (26.9 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 26/128 (20%), Positives = 56/128 (43%)
Query: 422 KENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVK 481
K+ R + + GA+P L ++L + E+++ + +L + + + + D + V+
Sbjct: 301 KQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGRIALKDSVNTIPHTVR 360
Query: 482 VLRFGLTTEARENAAATLFSLSAV-HEYKKKIADESGAVEALATLLRLGTPRGKKDAVTA 540
+L ++ + A + L+S+ + E +A E G L +++ G K
Sbjct: 361 LL-MKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLLVIQSGCDPALKQRSAE 419
Query: 541 LFNL-STH 547
L L S H
Sbjct: 420 LLKLCSLH 427
Score = 61 (26.5 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 33/156 (21%), Positives = 65/156 (41%)
Query: 390 ATAELLIQQLANGSPRAKTVAAREI-RLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVA 448
A L++ L +GS K AR I RL+ + G + + + +R +
Sbjct: 227 ARVSLMVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRRRRNG 286
Query: 449 QENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEY 508
++T + ++S++ K ++ G + +V VL L E E+A L SL E
Sbjct: 287 VSPALTLLKSVSVH-KQVRNLLVRIGAVPQLVDVLPC-LDVECLESALFVLDSLCLESEG 344
Query: 509 KKKIADESGAVEALATLLRLGTPRGKKDAVTALFNL 544
+ + D + LL + + A++ L+++
Sbjct: 345 RIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSV 380
Score = 60 (26.2 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 466 KSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATL 525
K R D +G I+ LR +A+ +A + L + H KK + G V +++L
Sbjct: 135 KKRSEDVQGRAIEILGTLRKA-KGKAKVHALSELKQVVMAHAIAKKTVVDEGGVFVISSL 193
Query: 526 LRLGTPRGK-KDAVTALFNLSTHTDN 550
L T +A+ L NL +D+
Sbjct: 194 LSPFTSHAVGSEAIAILVNLELDSDS 219
Score = 47 (21.6 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVL-----KAPALVGLLQAL 650
LVG+MR R + N V+ L L +S R L P LV +L L
Sbjct: 271 LVGLMRLVKDRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCL 323
Score = 41 (19.5 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 26/107 (24%), Positives = 45/107 (42%)
Query: 429 AKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKV--LRFG 486
+KAG + R +S + + S+ +N + + R+++E+G +V L G
Sbjct: 219 SKAGLMQPAR--VSLMVDMLNDGSIETKINCA---RLIGRLVEEKGFRAELVSSHSLLVG 273
Query: 487 LTT----EARENA---AATLFSLSAVHEYKKKIADESGAVEALATLL 526
L R N A TL +VH+ + + GAV L +L
Sbjct: 274 LMRLVKDRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVL 320
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 206 (77.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 65/231 (28%), Positives = 105/231 (45%)
Query: 281 IAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHR-TCPKTGQMLVHD 339
I + + IP F CPI L++M+DPVI+STG TYDR SI +W+ G + +CP T Q +
Sbjct: 5 IMDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDA 64
Query: 340 RLVPNRALRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAVEANRATAELLIQQL 399
L PN LR LI WCT + E + P E E LI+
Sbjct: 65 DLTPNHTLRRLIQSWCTLNA---------SYGVERIPTPRPPICKSEI-----EKLIRDS 110
Query: 400 ANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLS--THNPVAQENSVTAML 457
A+ S + + +R + N+ + AG L N++S + N + ++ +
Sbjct: 111 AS-SHENQVKCLKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLY 169
Query: 458 NLSIYD---KNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAV 505
+L + KN + + S+ K+++ G+ E+R A L ++ V
Sbjct: 170 HLETSETVLKNLLNNKKDNNIVKSLTKIMQRGMY-ESRVYATLLLKNILEV 219
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 184 (69.8 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 34/67 (50%), Positives = 43/67 (64%)
Query: 288 IPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRAL 347
IP F CPI L+ M+DPV + TGQTY+R +I +W GH TCP T Q L D + PN+ L
Sbjct: 64 IPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTL 123
Query: 348 RNLIVQW 354
+LI W
Sbjct: 124 HHLIYTW 130
Score = 63 (27.2 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 31/138 (22%), Positives = 58/138 (42%)
Query: 414 IRLLAKTG--KENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMD 471
+RLL K+ R+ + GA+P L ++L + +P E ++ + L + + + D
Sbjct: 295 LRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKD 354
Query: 472 EEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVH-EYKKKIADESGAVEALATLLRLGT 530
+ V+VL ++ A + L+S+ + E +A E G L +++ G
Sbjct: 355 SANTIPYTVRVL-MRVSENCTNYALSILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGC 413
Query: 531 PRGKKDAVTALFNL-STH 547
K L L S H
Sbjct: 414 DAALKQRSAELLKLCSLH 431
Score = 61 (26.5 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 36/144 (25%), Positives = 62/144 (43%)
Query: 390 ATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQ 449
A L++ L +GS K AR IR L + K RA + + ++ L L+
Sbjct: 231 AKVSLIVDMLNDGSNETKINCARLIRGLVEE-KGFRAELVSSHSL--LVGLMRLVKDKRH 287
Query: 450 ENSVTAMLNL----SIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAV 505
N V+ L L S++ + +S +M G + +V +L L E E A L +L
Sbjct: 288 RNGVSPALRLLKPISVHKQVRS-LMVSIGAVPQLVDILP-SLDPECLELALFVLDALCTD 345
Query: 506 HEYKKKIADESGAVE-ALATLLRL 528
E + + D + + + L+R+
Sbjct: 346 VEGRVAVKDSANTIPYTVRVLMRV 369
Score = 54 (24.1 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 466 KSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATL 525
K R D +G I+ L+ +AR +A + L + H +K E G V +++L
Sbjct: 139 KKRSEDVQGRAIEILGTLKKA-KGQARVHALSELKQIVIAHLMARKTVVEEGGVSVISSL 197
Query: 526 LRLGTPRGKKDAVTA-LFNLSTHTDN 550
L T V A L +L +D+
Sbjct: 198 LGPFTSHAVGSEVVAILVSLDLDSDS 223
Score = 39 (18.8 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKA-----PALVGLLQAL 650
LVG+MR + N V+ L L + R L P LV +L +L
Sbjct: 275 LVGLMRLVKDKRHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSL 327
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 190 (71.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 286 LSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNR 345
+++P F CPI LD+M+ PV + TG TYDR SI RW++ G+ TCP T Q+L + +PNR
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNR 67
Query: 346 ALRNLIVQW 354
L+ LI W
Sbjct: 68 TLQRLIEIW 76
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 171 (65.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P F CPI ++MR+P + + G TY+ S+ W++ GH T P T L H+ LVPN ALR
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 349 NLIVQW 354
+ I +W
Sbjct: 558 SAIQEW 563
Score = 66 (28.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 151 DVREQIDLMQRQARNAKLHIDKNDELLRLRLFSFLDEFEHGRVPNHVD-LRSFFVEGLGI 209
D R D+++ A + D+ND+L R +L L E E + + + +R F E +
Sbjct: 201 DTRRDRDMLEPNASEDQSESDRNDQLYR-QLKQALMEVEESKREAYEECVRRFKAENTAV 259
Query: 210 KDAKTCRA-EIEFLEEQIVNHEG 231
+ ++ R E + EE + EG
Sbjct: 260 EAIRSAREYEAMYNEEAKLRKEG 282
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 167 (63.8 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 31/88 (35%), Positives = 51/88 (57%)
Query: 287 SIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRA 346
++P+ F C + +M DPVIIS+G T++R I +W +EG+ +CP + + L L PN
Sbjct: 218 TLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVE 277
Query: 347 LRNLIVQWCTAHGIPYDPPETTDVSAES 374
L++ I +WC +G+ P V A +
Sbjct: 278 LKSQISEWCAKNGLDVQDPARKHVKASN 305
Score = 65 (27.9 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 450 ENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVH-EY 508
++S+ + NL +K + I + CL SI ++L + E +ENA + L L EY
Sbjct: 560 KHSIIILKNLCSTEKGRGCITETPDCLASIAELLESNVPEE-QENAISILLQLCVQKIEY 618
Query: 509 KKKIADESGAV-EALATLLRLGTPRGKKDA 537
+ E+ + +L + GT K A
Sbjct: 619 CCLVVREATDIYSSLILISNNGTEEVKVSA 648
Score = 61 (26.5 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 24/122 (19%), Positives = 49/122 (40%)
Query: 434 IPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARE 493
I +L+N L + + L L+ N+ I E + K+ L +E
Sbjct: 423 ITYLKNALERNGTAGEIIKGGLDLLLAFLSGNRRAI---ESLEEEVFKMFSVFLESEVVA 479
Query: 494 NAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVR 553
A + + + H + SG++ +L ++ ++ A+ L NLS+ + C+
Sbjct: 480 EEALNILEVLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMITLKNLSSSMEICLE 539
Query: 554 MI 555
M+
Sbjct: 540 MV 541
Score = 59 (25.8 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 24/113 (21%), Positives = 47/113 (41%)
Query: 414 IRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEE 473
++ L T K + + LL ++ P QEN+++ +L L + ++ E
Sbjct: 566 LKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLCVQKIEYCCLVVRE 625
Query: 474 GC--LGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALAT 524
S++ + G T E + +A+ L +L V K++ + S E T
Sbjct: 626 ATDIYSSLILISNNG-TEEVKVSASELLRALVEVDSDKEEEEEVSSRPEGRTT 677
Score = 59 (25.8 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 28/129 (21%), Positives = 56/129 (43%)
Query: 428 IAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGL 487
I +G++ L ++ + QE ++ + NLS + I E L I K+ F
Sbjct: 499 ITSSGSLSSLLKIVESQAEHLQEQAMITLKNLS----SSMEICLEMVSLDFIQKLTSFLQ 554
Query: 488 TTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTH 547
+++ L +L + + + I + + ++A LL P +++A++ L L
Sbjct: 555 QKVFCKHSIIILKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQL--- 611
Query: 548 TDNCVRMIE 556
CV+ IE
Sbjct: 612 ---CVQKIE 617
Score = 50 (22.7 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 606 MMRCGTPRGKENAVAALLELC 626
++ P +ENA++ LL+LC
Sbjct: 592 LLESNVPEEQENAISILLQLC 612
Score = 41 (19.5 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 155 QIDLMQRQARNAKLHIDKNDELLRL--RLFSFLDEFEHGR 192
+ID +R ++ K+H EL RL R+ + E R
Sbjct: 2 RIDYTERMPQSYKMHSSMCLELKRLVDRIMRIFPDIEDAR 41
Score = 39 (18.8 bits), Expect = 5.6e-11, Sum P(4) = 5.6e-11
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 108 CGQSSKLWLLLQNHSI----SGHFHDLNQEISTLLDVFPAD-DIELSEDVRE 154
C +SSKL++ + +I S L Q ++ + + P +I++S+ V++
Sbjct: 68 CSESSKLYMAVTGDAILARGSRAKKSLEQCLNDIRSIVPTILEIKISQIVQD 119
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 185 (70.2 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 41/102 (40%), Positives = 56/102 (54%)
Query: 256 GFEEDEAELGIGSHK-KRRKGLITQEIAET--FLSIPKDFCCPIMLDLMRDPVIISTGQT 312
G E++ EL I + + KG +E A T P+ F CPI D+M DP + + G T
Sbjct: 318 GIREEQEELKIKLREVSKLKGKREEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFT 377
Query: 313 YDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALRNLIVQW 354
Y+ +I+RW E GH T P + L H LVPN ALR+ I +W
Sbjct: 378 YEGEAISRWFERGHETSPMINKRLPHTSLVPNLALRSAIQEW 419
>UNIPROTKB|Q6K762 [details] [associations]
symbol:PUB73 "U-box domain-containing protein 73"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 UniPathway:UPA00143 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208 EMBL:CM000139
GO:GO:0000151 EMBL:AP004864 EMBL:AK106789 RefSeq:NP_001046869.1
UniGene:Os.54797 ProteinModelPortal:Q6K762 PRIDE:Q6K762
EnsemblPlants:LOC_Os02g28870.1 GeneID:4329384
KEGG:dosa:Os02t0490000-01 KEGG:osa:4329384 Gramene:Q6K762
eggNOG:NOG240446 OMA:HLLRDMI ProtClustDB:CLSN2692738 Uniprot:Q6K762
Length = 586
Score = 182 (69.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 74/288 (25%), Positives = 134/288 (46%)
Query: 268 SHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDR--RSIARWMEEG 325
+++K + + E A T IP + ++MRDPVI+ +G + D+ ++ +
Sbjct: 164 TYRKAKPPELPYEFA-TRWPIPIAHDGTLQAEVMRDPVILPSGYSVDQTYQNNQKRQNPW 222
Query: 326 HRTCPKTGQMLVHDRLVPNRALRNLIVQWCTAHGIPYDPPETTDVSAESFASALPSRAAV 385
T T L + VPN LR++I WC H P T+D PS +
Sbjct: 223 TNTSTFTDHSLPYSLSVPNHLLRDMISAWCLDHS-DLSPSTTSDT---------PS-TPL 271
Query: 386 EANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAK-AGAIPHLRNLL--- 441
E + I +L +G+ ++ A + I+LL KT K + +AK A IP L NL
Sbjct: 272 EPSEEEQIQRILKLFSGNSASQREALKLIQLLTKTTKGVQPCLAKYADIIPVLINLRRKY 331
Query: 442 -STHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRF----GLTTEARENAA 496
S+ +E +T +LNL+++ +N+ + + G+I K+++ G T + A
Sbjct: 332 KSSWTQDLEEERLTIILNLTMHRQNREILAGQNELAGAIKKIVKKAGNRGKRTSSLAKVA 391
Query: 497 ATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNL 544
+ + LS ++K++ D +G ++ L +L++ +A TA+ L
Sbjct: 392 SIVAVLSEFDMFRKRMLD-AGGMKMLRGMLKIKDTEVITEAATAILAL 438
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 174 (66.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P+ F CPI L++M+DP + + G TY+ +I+ W++ GH T P T L H +LVPN ALR
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 349 NLIVQWCTA 357
+ I +W A
Sbjct: 386 SAIQEWLHA 394
>TAIR|locus:2116792 [details] [associations]
symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
Genevestigator:Q9SZ56 Uniprot:Q9SZ56
Length = 518
Score = 176 (67.0 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 58/163 (35%), Positives = 85/163 (52%)
Query: 402 GSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPV-AQENSVTAMLNLS 460
G R K AA E+RLLAK E R +A GAIP L +++ V AQ S+ A+LNL
Sbjct: 155 GDCRKKITAASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDSRIVDAQIASLYALLNLG 214
Query: 461 I-YDKNKSRIMDEEGCLGSIVKVLRFGLTT--EARENAAATLFSLSAVHEYKKKIADESG 517
I D NK+ I+ + G + ++K++ T E E A LSA+ + K I SG
Sbjct: 215 IGNDANKAAIV-KAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSAL-DSNKPIIGSSG 272
Query: 518 A----VEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
A V+ L L + + ++DA+ AL+NLS + N ++E
Sbjct: 273 AIIFLVKTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILE 315
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 268 SHKKRRKGLITQEIAETFLSIPK--DFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEG 325
S KK RK I + + P+ DF CPI +++MRDP + + G TY+ +W+ G
Sbjct: 211 SPKKGRKETIEKSKSNESDEDPRLEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSG 270
Query: 326 HRTCPKTGQMLVHDRLVPNRALRNLIVQW 354
RT PKT + L + LVPN LR +I W
Sbjct: 271 GRTSPKTNKPLENHNLVPNHTLRIIIKDW 299
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 264 LGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWME 323
LG+ S R+ + ++ IP +F CPI +LM+DPVI S G +Y++ ++ W+
Sbjct: 380 LGLRSKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDPVIASDGYSYEKEAMENWIS 439
Query: 324 EGHRTCPKTGQMLVHDRLVPNRALRNLIVQWCTAH 358
+ RT P T +L L PNR L+ I +W H
Sbjct: 440 KKKRTSPMTNLVLPSAVLTPNRTLKMAINRWLETH 474
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 264 LGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWME 323
LG+ S R+ + ++ IP +F CPI +LM+DPVI S G +Y++ ++ W+
Sbjct: 380 LGLRSKVLRKIEELRTKVKALSSGIPDEFLCPITRELMKDPVIASDGYSYEKEAMENWIS 439
Query: 324 EGHRTCPKTGQMLVHDRLVPNRALRNLIVQWCTAH 358
+ RT P T +L L PNR L+ I +W H
Sbjct: 440 KKKRTSPMTNLILPSMVLTPNRTLKMAISRWLETH 474
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 165 (63.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P F CP++ D+M++P I + G TYDRR+I WME HRT P T L + L+PN L
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMEN-HRTSPVTNSPLQNVNLLPNHTLY 808
Query: 349 NLIVQW 354
IV+W
Sbjct: 809 AAIVEW 814
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 158 (60.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 266 IGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEG 325
+G K K + ++ + P +F CPI ++M+DPVI + G +Y+R +I W+
Sbjct: 395 LGLRSKVMKKIEELKMVPVYNGTPDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTK 454
Query: 326 HRTCPKTGQMLVHDRLVPNRALRNLIVQWCTA 357
+RT P T L L PNR L+ I +W T+
Sbjct: 455 NRTSPMTNLPLQTTLLTPNRTLKMAIFRWSTS 486
>TAIR|locus:2043709 [details] [associations]
symbol:AT2G45720 "AT2G45720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC003680 EMBL:AC004665
EMBL:BT015356 EMBL:BT015888 IPI:IPI00524023 PIR:T00885
RefSeq:NP_001031543.1 RefSeq:NP_182096.1 UniGene:At.28663
UniGene:At.36601 ProteinModelPortal:O64651 SMR:O64651 PaxDb:O64651
EnsemblPlants:AT2G45720.1 EnsemblPlants:AT2G45720.2 GeneID:819180
KEGG:ath:AT2G45720 TAIR:At2g45720 eggNOG:NOG268795
HOGENOM:HOG000239669 InParanoid:O64651 OMA:RSIVGHG PhylomeDB:O64651
ProtClustDB:CLSN2683369 ArrayExpress:O64651 Genevestigator:O64651
Uniprot:O64651
Length = 553
Score = 158 (60.7 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 64/273 (23%), Positives = 121/273 (44%)
Query: 382 RAAVEA-NRATAELLIQQLANGSPRAKTVAAREIRLLAKTGK-ENRAFIAKAGAIPHLRN 439
+A + A R L+Q L SP + A I LA++G EN ++ A+P L
Sbjct: 182 KAVITALGRTNVASLVQLLTATSPSVRENAVTVICSLAESGGCEN--WLISENALPSLIR 239
Query: 440 LLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATL 499
LL + + VA+E +V ++ +SI + I+ G +G ++++ + G + ++ +A TL
Sbjct: 240 LLESGSIVAKEKAVISLQRMSISSETSRSIVGHGG-VGPLIEICKTG-DSVSQSASACTL 297
Query: 500 FSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKD-AVTALFNLSTHTDNCVRMIEXX 558
++SAV E ++ +A+E G V+ + +L G G K+ A L NL++ + R +
Sbjct: 298 KNISAVPEVRQNLAEE-GIVKVMINILNCGILLGSKEYAAECLQNLTSSNETLRRSV--- 353
Query: 559 XXXXXXXXXXXXXXXXXXXXXXXXXXRQPIXXXXXXXXXXXXTGLVGMMRCGTPRGKENA 618
R + LV +++ G+ G + A
Sbjct: 354 ISENGIQTLLAYLDGPLPQESGVAAIRNLVGSVSVETYFKIIPSLVHVLKSGSI-GAQQA 412
Query: 619 VAALLELCRSGGASATERVLKAPALVGLLQALL 651
A+ + CR ++ T+R++ + LL +L
Sbjct: 413 AASTI--CRIATSNETKRMIGESGCIPLLIRML 443
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 156 (60.0 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 264 LGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWME 323
LG+ S R + + IP +F CPI +LM+DPVI S G +Y+R ++ W+
Sbjct: 380 LGLRSKVLRSIDELRTRMESLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIH 439
Query: 324 EGHRTCPKTGQMLVHDRLVPNRALRNLIVQWCTAH 358
+ RT P T L L PNR L+ I +W H
Sbjct: 440 KKKRTSPMTNLALPSLVLTPNRTLKMAINRWLETH 474
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 123 (48.4 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 292 FCCPIMLDLMRDPVIISTGQTYDRRSIARWMEE----GHR-TCPKTGQMLVHDRLVPNRA 346
F CP+ ++M DPV + G+T++R +I +W +E G +CP T Q L + + A
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 347 LRNLIVQW 354
LRN I +W
Sbjct: 87 LRNTIEEW 94
Score = 85 (35.0 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 41/191 (21%), Positives = 80/191 (41%)
Query: 364 PPETTDVSAESFASALPSRAAVEANRATAELLIQQL----ANGSP-RAKTVAAREIRLLA 418
P + A + S+ A V ++ LI+ L N P R K V+A + +
Sbjct: 326 PQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVGPNNLPIRLKEVSATILANIV 385
Query: 419 KTGKE-NRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLG 477
G + ++A + + +L +L+S P Q + ++ L+ K +++ G
Sbjct: 386 NIGYDFDKATLVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVPKVVYAIKTSG 445
Query: 478 SIVKVLRFGLTTEARENAAATLFSLSAVH--------EYKKKIADESGAVEALATLLRLG 529
+I+ +++F E REN L S+ +H E K + +G + +L ++
Sbjct: 446 AIISLVQF---IEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQLGSLVAIISEK 502
Query: 530 TPRGKKDAVTA 540
TP ++ A A
Sbjct: 503 TPITEEQAAAA 513
Score = 69 (29.3 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 28/117 (23%), Positives = 50/117 (42%)
Query: 428 IAKAGAIPHLRNLLSTHNPVAQENSVTAMLNL--SIYDKNKS-RIMDEEGCLGSIVKVLR 484
+ + GA+ L LL N E ++ A+ +L D K +I+DE + I+ VLR
Sbjct: 668 LVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLR 727
Query: 485 FGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTAL 541
T A + + + + +++A+E AL + R ++ A AL
Sbjct: 728 ENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENAL 784
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 155 (59.6 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 288 IPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRAL 347
IP +F CPI +LM+DPVI S G +Y+R ++ W+ + RT P T L L PNR L
Sbjct: 402 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTL 461
Query: 348 RNLIVQWCTAH 358
+ I +W H
Sbjct: 462 KMAINRWLETH 472
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 264 LGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWME 323
LG+ S R+ + ++ IP +F CPI +LM+DP+I S G +Y++ ++ W+
Sbjct: 379 LGLRSKVLRKIEELRTKVKTLSSEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWIS 438
Query: 324 EGHRTCPKTGQMLVHDRLVPNRALRNLIVQW 354
RT P T +L L PNR L+ I +W
Sbjct: 439 RKKRTSPMTNLVLSSVILTPNRTLKMAIDRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 264 LGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWME 323
LG+ S R+ + ++ IP +F CPI +LM+DP+I S G +Y++ ++ W+
Sbjct: 380 LGLRSKVLRKIEELRTKVKTLSSEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWIS 439
Query: 324 EGHRTCPKTGQMLVHDRLVPNRALRNLIVQW 354
RT P T +L L PNR L+ I +W
Sbjct: 440 RKKRTSPMTNLVLSSVILTPNRTLKMAIDRW 470
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 59/192 (30%), Positives = 95/192 (49%)
Query: 367 TTDVSAESFASALPSRAAV-EANRA----TAELLIQQLAN--GSP--RAKTVAAREIRLL 417
+TD + + + S AV EANR T L+ +L + SP R K A +R L
Sbjct: 219 STDPDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRNL 278
Query: 418 AKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLG 477
A + + I +AG +PHL L+ + + SV + N+SI+ N+ I+D G L
Sbjct: 279 A-SDTSYQLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDA-GFLK 336
Query: 478 SIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDA 537
+V++L + + E + +A +TL +L+A E +K ESGAVE L L +P +
Sbjct: 337 PLVRLLDYKDSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKELA-LDSPVSVQSE 395
Query: 538 VTALFNLSTHTD 549
++A F + D
Sbjct: 396 ISACFAILALAD 407
Score = 132 (51.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 371 SAESFASALPSRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAK 430
+A +FA + + + +R E ++ L + P+ + A + LA EN+ I +
Sbjct: 67 AALAFAE-ITEKYVRQVSREVLEPILILLQSQDPQIQVAACAALGNLA-VNNENKLLIVE 124
Query: 431 AGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTE 490
G + L N + N Q N+V + NL+ D NK +I G L + K+ +
Sbjct: 125 MGGLEPLINQMMGDNVEVQCNAVGCITNLATRDDNKHKIATS-GALIPLTKLAK-SKHIR 182
Query: 491 ARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDN 550
+ NA L +++ E +K++ + +GAV L +LL P + TAL N++ N
Sbjct: 183 VQRNATGALLNMTHSEENRKELVN-AGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEAN 241
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 149 (57.5 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 286 LSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNR 345
L P + CPI+ ++M +P I + G TY+R++I W+E+ H P T Q L H +L PN
Sbjct: 723 LRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEK-HNISPVTRQKLDHFKLTPNH 781
Query: 346 ALRNLIVQW 354
LR+ I W
Sbjct: 782 TLRSAIRDW 790
>UNIPROTKB|H3BTA3 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:Z92544 HGNC:HGNC:11427 Ensembl:ENST00000564316 Uniprot:H3BTA3
Length = 157
Score = 114 (45.2 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 288 IPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEE-GHRTCPKTGQMLVHDRLVPNRA 346
IP C I +LMR+P I +G TYDR+ I ++ GH P T L ++L+PN A
Sbjct: 81 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQLIPNLA 139
Query: 347 LRNLIVQWCTAHG 359
++ +I + + +G
Sbjct: 140 MKEVIDAFISENG 152
Score = 37 (18.1 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 222 LEEQIVNHEGDAE 234
LEE NHEGD +
Sbjct: 44 LEECQRNHEGDED 56
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 149 (57.5 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P F CPI ++M+DP + + G TY+ +I W++ H T P T L H L+ N ALR
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 349 NLIVQWCTAH 358
+ I +W H
Sbjct: 824 SAIQEWLQHH 833
>TAIR|locus:2198235 [details] [associations]
symbol:AT1G01830 "AT1G01830" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:NOG268795 HOGENOM:HOG000239669 ProtClustDB:CLSN2683369
EMBL:AY059739 EMBL:AY091273 IPI:IPI00535901 RefSeq:NP_001077443.1
RefSeq:NP_001077444.1 RefSeq:NP_563637.1 UniGene:At.26641
ProteinModelPortal:Q93YW3 SMR:Q93YW3 EnsemblPlants:AT1G01830.1
EnsemblPlants:AT1G01830.2 EnsemblPlants:AT1G01830.3 GeneID:839264
KEGG:ath:AT1G01830 TAIR:At1g01830 InParanoid:Q93YW3 OMA:GHLESKH
PhylomeDB:Q93YW3 ArrayExpress:Q93YW3 Genevestigator:Q93YW3
Uniprot:Q93YW3
Length = 574
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 48/150 (32%), Positives = 79/150 (52%)
Query: 395 LIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVT 454
L++ + +GS K AA I+ L+ T +EN IA G I L +L T + V+Q S
Sbjct: 256 LVRLIESGSLETKEKAAIAIQRLSMT-EENAREIAGHGGITPLIDLCKTGDSVSQAASAA 314
Query: 455 AMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIAD 514
A+ N+S + + +++ EEG + + +L G+ +RE+ A L +L+A + ++
Sbjct: 315 ALKNMSAVSELR-QLLAEEGIIRVSIDLLNHGILLGSREHMAECLQNLTAASDALREAIV 373
Query: 515 ESGAVEALATLLRLGTPRGKKDAVTALFNL 544
G V +L L L P ++ AVTAL NL
Sbjct: 374 SEGGVPSL--LAYLDGPLPQQPAVTALRNL 401
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 44/162 (27%), Positives = 81/162 (50%)
Query: 389 RATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVA 448
RA L+Q L S R + A I +LA++G + I++ G +P L L+ + +
Sbjct: 209 RANVAALVQLLTATSTRIREKAVNLISVLAESGHCDEWLISE-GVLPPLVRLIESGSLET 267
Query: 449 QENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEY 508
+E + A+ LS+ ++N I G + ++ + + G + +AAA L ++SAV E
Sbjct: 268 KEKAAIAIQRLSMTEENAREIAGHGG-ITPLIDLCKTGDSVSQAASAAA-LKNMSAVSEL 325
Query: 509 KKKIADESGAVEALATLLRLGTPRGKKDAVT-ALFNLSTHTD 549
++ +A+E G + LL G G ++ + L NL+ +D
Sbjct: 326 RQLLAEE-GIIRVSIDLLNHGILLGSREHMAECLQNLTAASD 366
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 52/159 (32%), Positives = 83/159 (52%)
Query: 407 KTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLS--THNPVAQENSVTAMLNLSI-YD 463
K AA E+RLLAK E R +A GAIP L +++ + + A S+ A+LNL I D
Sbjct: 126 KIAAASEVRLLAKDDIEARVTLAMLGAIPPLVSMIDDESQSEDALIASLYALLNLGIGND 185
Query: 464 KNKSRIMDEEGCLGSIVKVLRFGLT-TEA-RENAAATLFSLSAVHEYKKKIADESGAVEA 521
NK+ I+ + G + ++K++ +A E A LSA+ + K I SGA+
Sbjct: 186 VNKAAIV-KAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSAL-DSNKPIIGSSGAIIF 243
Query: 522 LATLLR----LGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
L L+ + + ++DA+ AL+NLS + N ++E
Sbjct: 244 LVKTLKNFEETSSSQAREDALRALYNLSIYHQNVSFILE 282
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 286 LSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNR 345
+++P +F CPI +LM+DPVI + G +Y++ ++ W+ R+ P T L L PNR
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTPNR 461
Query: 346 ALRNLIVQW 354
L+ I +W
Sbjct: 462 TLKMAISRW 470
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 287 SIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRA 346
S+P F CPI +++M+DP + S G TY+ +I W + G P T L + LVPNR
Sbjct: 434 SVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNRV 493
Query: 347 LRNLI 351
LR+ I
Sbjct: 494 LRSFI 498
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 143 (55.4 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 274 KGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTG 333
+ + + + + P F CPI D+M +P + S G TY++R+I W+++ H++ P T
Sbjct: 711 RNMFADNLIDHHHNAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS-PMTD 769
Query: 334 QMLVHDRLVPNRALRNLIVQW 354
D L+PN +L + I +W
Sbjct: 770 LPFPSDSLLPNHSLLSAIKEW 790
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 142 (55.0 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P + CPI ++M+DP+I + G TY+ +I W+ GH T P T + L+PN AL
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 349 NLIVQW 354
I W
Sbjct: 796 LAIQDW 801
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 137 (53.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P+ F CPI D+M++P + + G TY+ RW+ G P T L + L+PN LR
Sbjct: 295 PQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLVLR 354
Query: 349 NLIVQWCTAH 358
+ I W H
Sbjct: 355 SAIKDWLQQH 364
>TAIR|locus:2079716 [details] [associations]
symbol:CHIP "carboxyl terminus of HSC70-interacting
protein" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009266
"response to temperature stimulus" evidence=IEP;IMP] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0009737 "response to
abscisic acid stimulus" evidence=IMP] [GO:0051087 "chaperone
binding" evidence=IPI] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009610 "response to symbiotic fungus" evidence=RCA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009733 "response
to auxin stimulus" evidence=RCA] [GO:0009738 "abscisic acid
mediated signaling pathway" evidence=RCA] [GO:0009753 "response to
jasmonic acid stimulus" evidence=RCA] [GO:0042538 "hyperosmotic
salinity response" evidence=RCA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 UniPathway:UPA00143 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009651 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0009266 GO:GO:0000151
EMBL:AC009853 EMBL:AY042807 EMBL:AY064647 IPI:IPI00547964
RefSeq:NP_566305.1 UniGene:At.18421 HSSP:Q9WUD1
ProteinModelPortal:Q9SRS9 SMR:Q9SRS9 STRING:Q9SRS9
EnsemblPlants:AT3G07370.1 GeneID:819925 KEGG:ath:AT3G07370
TAIR:At3g07370 eggNOG:NOG260504 HOGENOM:HOG000163725
InParanoid:Q9SRS9 KO:K09561 OMA:LEWEEES PhylomeDB:Q9SRS9
ProtClustDB:CLSN2688144 Genevestigator:Q9SRS9 Uniprot:Q9SRS9
Length = 278
Score = 133 (51.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 55/222 (24%), Positives = 101/222 (45%)
Query: 144 DDIELSEDVREQIDLMQRQARNAKLHIDKNDELLRLRLFSFLDEFEHG--RVPNHVDL-R 200
D ++ ED R+ I L+ + K H +L L L EF +G + +DL R
Sbjct: 59 DWTKVEEDCRKAIQLVHN---SVKAHY-----MLGLALLQ-KKEFTNGVKELQRALDLGR 109
Query: 201 SFFVEGLGIKDAKTCRAEIEFLEEQIVNHEGDAEPTASVLNGFVAIMRYSRFLLFGFEED 260
G +++ ++ +++E ++V+ E S+ A + R L E+
Sbjct: 110 CSNPTGYMVEEIWEELSKAKYMEWELVSAMRSWELN-SLKETCEAALNQQRALDMSRTEE 168
Query: 261 EAELGIGSHKKRRKGL--ITQEIAETF--LSIPKDFCCPIMLDLMRDPVIISTGQTYDRR 316
++ +H +R K L + ++ AE +P CC I L++ RDPVI +G TY+R
Sbjct: 169 SSDEAYTAHTERLKALERVFKKAAEEDKPTEVPDYLCCNITLEIFRDPVISPSGVTYERA 228
Query: 317 SIARWMEEGHRTCPKTGQMLVHDRLVPNRALRNLIVQWCTAH 358
+I +++ + P T + + LVPN A++ + + H
Sbjct: 229 AILEHLKKVGKFDPITREKIDPANLVPNLAIKEAVAAYLEKH 270
>POMBASE|SPBC354.14c [details] [associations]
symbol:vac8 "vacuolar protein Vac8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000011 "vacuole
inheritance" evidence=ISO] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0000324 "fungal-type vacuole" evidence=ISO]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016236
"macroautophagy" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] [GO:0043495 "protein anchor" evidence=ISO]
[GO:0071255 "CVT vesicle assembly" evidence=ISO] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 PomBase:SPBC354.14c GO:GO:0005794 GO:GO:0043234
GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG5064
GO:GO:0000329 GO:GO:0043495 GO:GO:0000011 HSSP:Q02248 GO:GO:0016236
GO:GO:0042144 KO:K08332 PANTHER:PTHR23315:SF8 PIR:T40294
RefSeq:NP_595238.1 ProteinModelPortal:O43028 STRING:O43028
EnsemblFungi:SPBC354.14c.1 GeneID:2541010 KEGG:spo:SPBC354.14c
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 NextBio:20802124
GO:GO:0071255 Uniprot:O43028
Length = 550
Score = 138 (53.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 51/175 (29%), Positives = 89/175 (50%)
Query: 367 TTDVSAESFASALPSRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRA 426
TT +S + A+ + ++ LIQ + SP+ + AA +R LA + + +
Sbjct: 229 TTSISNIA-VDAVHRKRLAQSEPKLVRSLIQLMDTSSPKVQCQAALALRNLA-SDERYQI 286
Query: 427 FIAKAGAIPHLRNLL-STHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRF 485
I ++ A+P L LL S++ P+ SV + N+SI+ N+S I+D G L +V +L
Sbjct: 287 EIVQSNALPSLLRLLRSSYLPLILA-SVACIRNISIHPLNESPIIDA-GFLRPLVDLLSC 344
Query: 486 GLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTA 540
E + +A +TL +L+A E K+ E+ A++ L L+ L P + +TA
Sbjct: 345 TENEEIQCHAVSTLRNLAASSERNKRAIIEANAIQKLRCLI-LDAPVSVQSEMTA 398
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 45/159 (28%), Positives = 80/159 (50%)
Query: 371 SAESFASALPSRAAVEANRATAELLIQQLANGSPRAKTVAAREIRL--LAKTGKENRAFI 428
+A +FA + + E +R T E ++ L SP A+ A + L LA EN+A +
Sbjct: 67 AALAFAE-ITEKDVREVDRETIEPVLFLLQ--SPDAEIQRAASVALGNLA-VNAENKALV 122
Query: 429 AKAGAIPHL-RNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGL 487
K + L R ++S H V Q N+V + NL+ D+NKS+I G LG + ++ +
Sbjct: 123 VKLNGLDLLIRQMMSPHVEV-QCNAVGCITNLATLDENKSKIA-HSGALGPLTRLAK-SK 179
Query: 488 TTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLL 526
+ NA L +++ +E ++++ +G + L +LL
Sbjct: 180 DIRVQRNATGALLNMTHSYENRQQLVS-AGTIPVLVSLL 217
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 138 (53.6 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 56/190 (29%), Positives = 96/190 (50%)
Query: 367 TTDVSAESFASALPSRAAVEA-NRA----TAELLIQQLAN----GSPRAKTVAAREIRLL 417
++DV + + + S AV+A NR T L+Q L + +P+ + AA +R L
Sbjct: 240 SSDVDVQYYCTTALSNIAVDASNRKRLAQTESRLVQSLVHLMDSSTPKVQCQAALALRNL 299
Query: 418 AKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLG 477
A K + G P LR L S++ P+ ++V + N+SI+ N+S I+D G L
Sbjct: 300 ASDEKYQLEIVRAKGLPPLLRLLQSSYLPLIL-SAVACIRNISIHPLNESPIIDA-GFLK 357
Query: 478 SIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATL-LRLG-TPRGKK 535
+V +L E + +A +TL +L+A + K++ ++GAV+ L LR+ T + +
Sbjct: 358 PLVDLLGSTDNEEIQCHAISTLRNLAASSDRNKELVLQAGAVQKCKDLVLRVPVTVQSEM 417
Query: 536 DAVTALFNLS 545
A A+ LS
Sbjct: 418 TAAIAVLALS 427
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 50/189 (26%), Positives = 97/189 (51%)
Query: 366 ETTDVSAESFASALPSRAAVEANR-----ATAEL--LIQQLANGSPRAKTVAAREIRLLA 418
+++D+ + ASA AV A+ A L LI+Q+ + + + A I LA
Sbjct: 116 QSSDIEVQRAASAALGNLAVNADNKVLIVALGGLAPLIKQMMSPNVEVQCNAVGCITNLA 175
Query: 419 KTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGS 478
T ++N+A IA++GA+ L L + + Q N+ A+LN++ D N+ ++++ G +
Sbjct: 176 -THEDNKAKIARSGALGPLIRLAKSKDMRVQRNATGALLNMTHSDDNRQQLVNA-GAIPV 233
Query: 479 IVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIAD-ESGAVEALATLLRLGTPRGKKDA 537
+V++L + + L +++ +K++A ES V++L L+ TP+ + A
Sbjct: 234 LVQLLSSS-DVDVQYYCTTALSNIAVDASNRKRLAQTESRLVQSLVHLMDSSTPKVQCQA 292
Query: 538 VTALFNLST 546
AL NL++
Sbjct: 293 ALALRNLAS 301
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 41/183 (22%), Positives = 84/183 (45%)
Query: 374 SFASALPSRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGA 433
+FA + R E +R T E ++ L + + A+ + LA +A G
Sbjct: 91 TFAE-ITERDVREVDRDTLEPILFLLQSSDIEVQRAASAALGNLAVNADNKVLIVALGGL 149
Query: 434 IPHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTTEARE 493
P ++ ++S N Q N+V + NL+ ++ NK++I G LG ++++ + +
Sbjct: 150 APLIKQMMSP-NVEVQCNAVGCITNLATHEDNKAKIA-RSGALGPLIRLAK-SKDMRVQR 206
Query: 494 NAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVR 553
NA L +++ + ++++ + +GA+ L LL + TAL N++ N R
Sbjct: 207 NATGALLNMTHSDDNRQQLVN-AGAIPVLVQLLSSSDVDVQYYCTTALSNIAVDASNRKR 265
Query: 554 MIE 556
+ +
Sbjct: 266 LAQ 268
>CGD|CAL0001835 [details] [associations]
symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
"vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
"Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
"nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
[GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 55/192 (28%), Positives = 94/192 (48%)
Query: 369 DVSAESFASALPSRAAV-EANR----ATAELLIQQLAN----GSPRAKTVAAREIRLLAK 419
D + + + S AV E NR +T L+ QL + SPR + A +R LA
Sbjct: 223 DADVQYYCTTALSNIAVDEVNRKKLASTEPKLVGQLVHLMDSPSPRVQCQATLALRNLA- 281
Query: 420 TGKENRAFIAKAGAIPHLRNLLS-THNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGS 478
+ + I +AG +PHL LL+ H P+ +V + N+SI+ N++ I+ E G L
Sbjct: 282 SDSGYQVEIVRAGGLPHLVQLLTCNHQPLVLA-AVACIRNISIHPLNEALII-EAGFLKP 339
Query: 479 IVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAV 538
+V +L + + E + +A +TL +L+A E + +GAV+ L+ L P + +
Sbjct: 340 LVGLLDYTDSEEIQCHAVSTLRNLAASSEKNRTALLAAGAVDKCKELV-LKVPLTVQSEI 398
Query: 539 TALFNLSTHTDN 550
+A F + D+
Sbjct: 399 SACFAILALADD 410
Score = 128 (50.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 48/181 (26%), Positives = 86/181 (47%)
Query: 371 SAESFASALPSRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAK 430
+A +FA + + E NR E ++ L + + A + LA EN+ I +
Sbjct: 69 AALAFAE-ITEKDVREVNRDVLEPILILLQSADSEVQRAACGALGNLA-VNTENKILIVE 126
Query: 431 AGAI-PHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTT 489
G + P +R ++ST+ V Q N+V + NL+ D NKS+I + G L + K+ +
Sbjct: 127 MGGLEPLIRQMMSTNIEV-QCNAVGCITNLATQDDNKSKIA-KSGALIPLTKLAK-SKDI 183
Query: 490 EARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTD 549
+ NA L +++ E ++++ + +GAV L +LL + TAL N++
Sbjct: 184 RVQRNATGALLNMTHSGENRQELVN-AGAVPVLVSLLSNEDADVQYYCTTALSNIAVDEV 242
Query: 550 N 550
N
Sbjct: 243 N 243
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQAL 650
LV +M +PR + A AL L G +++A L L+Q L
Sbjct: 258 LVHLMDSPSPRVQCQATLALRNLASDSGYQV--EIVRAGGLPHLVQLL 303
>UNIPROTKB|Q59MN0 [details] [associations]
symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
albicans SC5314" [GO:0000011 "vacuole inheritance"
evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 55/192 (28%), Positives = 94/192 (48%)
Query: 369 DVSAESFASALPSRAAV-EANR----ATAELLIQQLAN----GSPRAKTVAAREIRLLAK 419
D + + + S AV E NR +T L+ QL + SPR + A +R LA
Sbjct: 223 DADVQYYCTTALSNIAVDEVNRKKLASTEPKLVGQLVHLMDSPSPRVQCQATLALRNLA- 281
Query: 420 TGKENRAFIAKAGAIPHLRNLLS-THNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGS 478
+ + I +AG +PHL LL+ H P+ +V + N+SI+ N++ I+ E G L
Sbjct: 282 SDSGYQVEIVRAGGLPHLVQLLTCNHQPLVLA-AVACIRNISIHPLNEALII-EAGFLKP 339
Query: 479 IVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAV 538
+V +L + + E + +A +TL +L+A E + +GAV+ L+ L P + +
Sbjct: 340 LVGLLDYTDSEEIQCHAVSTLRNLAASSEKNRTALLAAGAVDKCKELV-LKVPLTVQSEI 398
Query: 539 TALFNLSTHTDN 550
+A F + D+
Sbjct: 399 SACFAILALADD 410
Score = 128 (50.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 48/181 (26%), Positives = 86/181 (47%)
Query: 371 SAESFASALPSRAAVEANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAK 430
+A +FA + + E NR E ++ L + + A + LA EN+ I +
Sbjct: 69 AALAFAE-ITEKDVREVNRDVLEPILILLQSADSEVQRAACGALGNLA-VNTENKILIVE 126
Query: 431 AGAI-PHLRNLLSTHNPVAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFGLTT 489
G + P +R ++ST+ V Q N+V + NL+ D NKS+I + G L + K+ +
Sbjct: 127 MGGLEPLIRQMMSTNIEV-QCNAVGCITNLATQDDNKSKIA-KSGALIPLTKLAK-SKDI 183
Query: 490 EARENAAATLFSLSAVHEYKKKIADESGAVEALATLLRLGTPRGKKDAVTALFNLSTHTD 549
+ NA L +++ E ++++ + +GAV L +LL + TAL N++
Sbjct: 184 RVQRNATGALLNMTHSGENRQELVN-AGAVPVLVSLLSNEDADVQYYCTTALSNIAVDEV 242
Query: 550 N 550
N
Sbjct: 243 N 243
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQAL 650
LV +M +PR + A AL L G +++A L L+Q L
Sbjct: 258 LVHLMDSPSPRVQCQATLALRNLASDSGYQV--EIVRAGGLPHLVQLL 303
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 146 (56.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P F CP++ D+M +P + + G TYDR +I W++E H T P T L L+PN L
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE-HNTSPMTDSPLHSKNLLPNYTLY 825
Query: 349 NLIVQW 354
I++W
Sbjct: 826 TAIMEW 831
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 184 FLD-EFEH-GRVPNHVDLRSFFVEGLGIKDAKTCRAEIEFLEEQIVNHE 230
++D E++ GR+ + D+ SF + L + AK A F+E + +++
Sbjct: 650 YIDPEYQRTGRISSKSDIYSFGMILLQLLTAKPAIALTHFVESAMDSND 698
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 124 (48.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 287 SIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHR-----TCPKTGQMLVHDRL 341
+I + F CP+ +M +PV + GQT++R +I +W +E +CP T + L L
Sbjct: 24 NIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDL 83
Query: 342 VPNRALRNLIVQW 354
P+ ALRN I +W
Sbjct: 84 SPSIALRNTIEEW 96
Score = 62 (26.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 21/89 (23%), Positives = 45/89 (50%)
Query: 395 LIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVT 454
L+ +L GSP K A + +LA + + +A+ L +L+ T + +E ++
Sbjct: 278 LLAKLLEGSPETKVSMAFYLGVLA-LNNDVKVIVAQTVG-SSLIDLMRTRDMSQREAALG 335
Query: 455 AMLNLSIYDKNKSRIMDEEGCLGSIVKVL 483
A+ N+S ++ ++++ G L ++K L
Sbjct: 336 ALNNISSFE-GSAKLLINTGILPPLIKDL 363
Score = 49 (22.3 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 468 RIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKKIADESGAVEALATLLR 527
R++DE + I+ VL T R A + + + E +++ +E AL +
Sbjct: 721 RLIDEADGITPILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQ 780
Query: 528 LGTPRGKKDAVTAL 541
R ++ A AL
Sbjct: 781 NADFRTRQIAEKAL 794
Score = 47 (21.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 428 IAKAGAIPHLRNLLSTH-NPVAQENSVTAMLNLSIY--DKNKSRIMDEEGCLGSIVKVLR 484
I + AI L + H N + S+ + N+S + ++ + + G LGS+V ++
Sbjct: 450 IRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHMSEELANALRSTVGQLGSLVSIIS 509
Query: 485 FGLTTEARENAAA 497
T E AAA
Sbjct: 510 ENTPTITEEQAAA 522
Score = 45 (20.9 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 449 QENSVTAMLNLSIYDKNKSRI 469
Q S TA+ NLS+ KN ++I
Sbjct: 617 QRASATALENLSLESKNLTKI 637
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 142 (55.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 289 PKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEEGHRTCPKTGQMLVHDRLVPNRALR 348
P + CPI+ ++M DP I + G TY+R++I W+++ P T L H L PN LR
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 349 NLIVQW 354
+ I +W
Sbjct: 769 SAIREW 774
Score = 39 (18.8 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 8/41 (19%), Positives = 19/41 (46%)
Query: 253 LLFGFEEDEAELGIGSHKKRRKGLITQEIAETFLSIPKDFC 293
++ E++E + +K + +E+ E + K+FC
Sbjct: 340 VITALEKEEMRRKAAAEEKEKHLKAVKEVEEAKSMLAKEFC 380
>WB|WBGene00000500 [details] [associations]
symbol:chn-1 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IGI;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0018991 "oviposition" evidence=IGI] [GO:0045214
"sarcomere organization" evidence=IGI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0018991 GO:GO:0002119 GO:GO:0040011 Gene3D:1.25.40.10
GO:GO:0045214 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0000151 GO:GO:0051865 KO:K09561
GeneTree:ENSGT00650000093277 EMBL:FO081495 EMBL:AF303269 PIR:T25874
RefSeq:NP_491781.2 UniGene:Cel.19411 ProteinModelPortal:G5ECY6
SMR:G5ECY6 EnsemblMetazoa:T09B4.10.1 EnsemblMetazoa:T09B4.10.2
GeneID:172303 KEGG:cel:CELE_T09B4.10 CTD:172303 WormBase:T09B4.10
OMA:HSWAYKL NextBio:874925 Uniprot:G5ECY6
Length = 266
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 276 LITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEE-GHRTCPKTGQ 334
L TQE + +P+ C I L+LM++PVI+ +G TYDR I + + GH P T +
Sbjct: 174 LATQEKRQN-REVPEMLCGKITLELMKEPVIVPSGITYDREEIVQHLRRIGHFD-PVTRK 231
Query: 335 MLVHDRLVPNRALRNLI 351
L + ++PN AL+ +I
Sbjct: 232 PLTENEIIPNYALKEVI 248
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 111 (44.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 48/173 (27%), Positives = 79/173 (45%)
Query: 387 ANRATAELLIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNP 446
A R L+ L + VA + LA + N+ I K+GA+P L +L +
Sbjct: 36 AEREIISPLLSMLQSQDCITTEVALSALLSLAFGSERNKVRIVKSGAVPTLLEILQSETK 95
Query: 447 -VAQENSVTAMLNLSIYDKNKSRIMDEEGCLGSIVKVLRFG-LTTEARENAAATLFSLSA 504
V E ++ +L LS +KNK + M + +V ++ LT +A+ + ATL +LS
Sbjct: 96 MVVLELAMAFLLILSSCNKNKVK-MASTRLVQLLVGLIGLDRLTIQAKVDGIATLQNLST 154
Query: 505 VHEYKKKIADESGAVEALATLLRLGTPRGK-KD-AVTALFNLSTHTDNCVRMI 555
+H+ + SGA AL ++ + D AV L N+ +H+ V I
Sbjct: 155 LHQIVPLVI-ASGAPYALLQVINFCDKSSELADKAVALLENIISHSPESVSSI 206
Score = 58 (25.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 603 LVGMMRCGTPRGKENAVAALLELCRSGGASATERVLKAPALVGLLQ 648
LV + G+ + KE+AV LL +C + + +L+ + GLLQ
Sbjct: 213 LVEAIEEGSAQCKEHAVGILLGICNNDRETNRGMILREGVMPGLLQ 258
>ZFIN|ZDB-GENE-070410-21 [details] [associations]
symbol:ube4a "ubiquitination factor E4A (UFD2
homolog, yeast)" species:7955 "Danio rerio" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IEA] InterPro:IPR003613 InterPro:IPR019474
Pfam:PF04564 Pfam:PF10408 SMART:SM00504 ZFIN:ZDB-GENE-070410-21
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 CTD:9354 GeneTree:ENSGT00390000009300 KO:K10596
EMBL:CR847931 IPI:IPI00631668 RefSeq:XP_001922961.2
UniGene:Dr.160617 UniGene:Dr.69923 Ensembl:ENSDART00000059376
GeneID:557121 KEGG:dre:557121 NextBio:20881830 Bgee:E7F6E1
Uniprot:E7F6E1
Length = 1076
Score = 128 (50.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 32/81 (39%), Positives = 44/81 (54%)
Query: 279 QEIAETFLSIPKDFCCPIMLDLMRDPVII-STGQTYDRRSIARWMEEGHRTCPKTGQMLV 337
Q+ ETF P +F PIM LM DPV++ S+ T DR +IAR + +T P L
Sbjct: 986 QQEEETFSDAPDEFLDPIMSTLMLDPVLLPSSNVTVDRSTIARHLLSD-QTDPFNRSPLT 1044
Query: 338 HDRLVPNRALRNLIVQWCTAH 358
D++ PN LR I++W H
Sbjct: 1045 MDQIRPNEELRQQIMKWLADH 1065
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 26/98 (26%), Positives = 44/98 (44%)
Query: 128 HDLNQEISTLLDVFPADDIELSEDVREQI-DLMQRQARNAKLHIDKNDELLRLRLFSFLD 186
H N +S V +I +S++V EQ+ DL+ R A+ ++ E L + S L
Sbjct: 204 HCKNLTVSNARTVLLTPEIYISQNVYEQLLDLLLEAVRGAQF--EEVVEFLEEVIASLLA 261
Query: 187 EFEHGRVPNHVDLRSFFVEGLGIKDAKTCRAEI-EFLE 223
+ E R V + F + +KD C+ + +LE
Sbjct: 262 DQEV-RTFGEVMVPVFDIFHGRVKDLDLCQLLLFSYLE 298
>UNIPROTKB|F1P105 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0019900 "kinase binding"
evidence=IEA] [GO:0030544 "Hsp70 protein binding" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0030911 "TPR domain binding" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0042405 "nuclear inclusion body" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0051787 "misfolded protein binding" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0071218 "cellular response to
misfolded protein" evidence=IEA] [GO:0090035 "positive regulation
of chaperone-mediated protein complex assembly" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515
GO:GO:0032436 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 IPI:IPI00600865
OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:AADN02049413 EMBL:AADN02049414
Ensembl:ENSGALT00000001529 Uniprot:F1P105
Length = 251
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 288 IPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEE-GHRTCPKTGQMLVHDRLVPNRA 346
IP C I +LMR+P I +G TYDR+ I ++ GH P T L D+L+PN A
Sbjct: 175 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQDQLIPNLA 233
Query: 347 LRNLIVQWCTAHG 359
++ +I + + +G
Sbjct: 234 MKEVIDAFISENG 246
>UNIPROTKB|J9NRV4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 OMA:QENELHS
GeneTree:ENSGT00650000093277 EMBL:AAEX03004675
Ensembl:ENSCAFT00000049790 Uniprot:J9NRV4
Length = 231
Score = 116 (45.9 bits), Expect = 0.00040, P = 0.00040
Identities = 42/140 (30%), Positives = 65/140 (46%)
Query: 222 LEEQIVNHEGDAEPTASVLNGFVAI-MRYSRFLLFGFEEDEAELGIGSHKKRRKGLITQE 280
LEE NHEGD E V I ++ ++L + DE + +K+R
Sbjct: 105 LEECQRNHEGD-EDDGHVRAQQACIEAKHDKYLA---DMDELFSQVDEKRKKR------- 153
Query: 281 IAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEE-GHRTCPKTGQMLVHD 339
IP C I +LMR+P I +G TYDR+ I ++ GH P T L +
Sbjct: 154 ------DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQE 206
Query: 340 RLVPNRALRNLIVQWCTAHG 359
+L+PN A++ +I + + +G
Sbjct: 207 QLIPNLAMKEVIDAFISENG 226
>FB|FBgn0260799 [details] [associations]
symbol:p120ctn "Adherens junction protein p120" species:7227
"Drosophila melanogaster" [GO:0005912 "adherens junction"
evidence=ISS;IDA;IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=IGI] [GO:0001745 "compound eye morphogenesis"
evidence=IGI;IMP] [GO:0034334 "adherens junction maintenance"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:AE013599 GO:GO:0005737
GO:GO:0005813 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0007155 GO:GO:0005912 GeneTree:ENSGT00690000101851
GO:GO:0001745 GO:GO:0034334 HSSP:P35222 UniGene:Dm.1722
GeneID:3355143 KEGG:dme:Dmel_CG17484 CTD:3355143
FlyBase:FBgn0260799 GenomeRNAi:3355143 NextBio:850849
RefSeq:NP_001036444.1 ProteinModelPortal:Q7PLI0 SMR:Q7PLI0
MINT:MINT-915558 STRING:Q7PLI0 PRIDE:Q7PLI0
EnsemblMetazoa:FBtr0111114 UCSC:CG17484-RA InParanoid:Q7PLI0
OMA:ASQGRTR PhylomeDB:Q7PLI0 Bgee:Q7PLI0 Uniprot:Q7PLI0
Length = 781
Score = 124 (48.7 bits), Expect = 0.00046, P = 0.00046
Identities = 43/147 (29%), Positives = 71/147 (48%)
Query: 395 LIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVT 454
+I L+N S K AA ++ L N+ G IP L LLS +P +N+
Sbjct: 230 VISFLSNPSSAIKANAAAYLQHLCYMDDPNKQRTRSLGGIPPLVRLLSYDSPEIHKNACG 289
Query: 455 AMLNLSI---YDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKK 511
A+ NLS D+NK I + G + ++V +L TE +E L+++S+ + K+
Sbjct: 290 ALRNLSYGRQNDENKRGIKNAGG-IAALVHLLCRSQETEVKELVTGVLWNMSSCEDLKRS 348
Query: 512 IADESGAVEALATLLRLGTPRGKKDAV 538
I DE+ V + ++++ P DAV
Sbjct: 349 IIDEA-LVAVVCSVIK---PHSGWDAV 371
>UNIPROTKB|Q5ZHY5 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0071218 "cellular response to misfolded
protein" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0042803
GO:GO:0043161 GO:GO:0006281 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006515 GO:GO:0000209 GO:GO:0000151
GO:GO:0071218 GO:GO:0034450 KO:K09561 EMBL:AJ720999 IPI:IPI00600865
RefSeq:NP_001026577.1 UniGene:Gga.6217 ProteinModelPortal:Q5ZHY5
SMR:Q5ZHY5 IntAct:Q5ZHY5 STRING:Q5ZHY5 GeneID:426918
KEGG:gga:426918 CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046
InParanoid:Q5ZHY5 OrthoDB:EOG4Z36F9 NextBio:20828310 Uniprot:Q5ZHY5
Length = 314
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 288 IPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEE-GHRTCPKTGQMLVHDRLVPNRA 346
IP C I +LMR+P I +G TYDR+ I ++ GH P T L D+L+PN A
Sbjct: 238 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQDQLIPNLA 296
Query: 347 LRNLIVQWCTAHG 359
++ +I + + +G
Sbjct: 297 MKEVIDAFISENG 309
>TAIR|locus:2103351 [details] [associations]
symbol:ARABIDILLO-2 "AT3G60350" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048527 "lateral root development" evidence=IGI;IMP]
InterPro:IPR000225 InterPro:IPR001810 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181 SMART:SM00185
SMART:SM00256 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048527
HSSP:Q02248 eggNOG:NOG48141 HOGENOM:HOG000029512
ProtClustDB:CLSN2685043 EMBL:AL138646 IPI:IPI00537320 PIR:T47846
RefSeq:NP_191594.1 UniGene:At.48788 UniGene:At.63623
ProteinModelPortal:Q9M224 SMR:Q9M224 PRIDE:Q9M224
EnsemblPlants:AT3G60350.1 GeneID:825206 KEGG:ath:AT3G60350
TAIR:At3g60350 InParanoid:Q9M224 OMA:RTTIDHI PhylomeDB:Q9M224
Genevestigator:Q9M224 Uniprot:Q9M224
Length = 928
Score = 128 (50.1 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 64/220 (29%), Positives = 99/220 (45%)
Query: 346 ALRNLIVQWCTAHGIPYDPPETTDVSAESFAS-ALPSRAAVEANRATAELLIQQLANGSP 404
AL +LI +W HG + +A + A+ A + ++E RA + LA
Sbjct: 515 ALVDLIFRW--PHGCD----GVLERAAGALANLAADDKCSMEVARAGGVHALVMLARNCK 568
Query: 405 R--AKTVAAREIRLLAKTGKEN--RAFIAK-AGAIPHLRNLL-STHNPVAQENSVTAMLN 458
A+ AAR + LA G N A + + AGA+ L L S H V QE + A+ N
Sbjct: 569 YEGAQEQAARALANLAAHGDSNGNNAAVGQEAGALEALVQLTQSPHEGVKQE-AAGALWN 627
Query: 459 LSIYDKNKSRIMDEEGCLGSIVKVLRFG--LTTEARENAAATLFSLSAVHEYKKKIADES 516
L+ DKN+ I G + ++V + + +T +E A L+ LS V E
Sbjct: 628 LAFDDKNRESIAAFGG-VEALVALAKSSSNASTGLQERVAGALWGLS-VSEANSIAIGHE 685
Query: 517 GAVEALATLLRLGTPRGKKDAVTALFNLSTHTDNCVRMIE 556
G + L L+R + A AL+NLS + N +R++E
Sbjct: 686 GGIPPLIALVRSEAEDVHETAAGALWNLSFNPGNALRIVE 725
Score = 44 (20.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 615 KENAVAALLELCRSGGASATERVLKAPAL 643
+E V AL++LC S S R + A AL
Sbjct: 725 EEGGVVALVQLC-SSSVSKMARFMAALAL 752
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 97 (39.2 bits), Expect = 0.00059, P = 0.00059
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 256 GFEEDEAELGIGSHKKRRKGLITQEIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDR 315
G + LG GS K+ + + ++ DF CPI D++ + + G ++
Sbjct: 3 GVGGSSSSLGSGSRKRPLLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCY 62
Query: 316 RSIARWMEEGHRTCPKTGQMLVH-DRLVPN 344
+ I + +E+ +R CPK ++ + D L PN
Sbjct: 63 KCIHQSLEDNNR-CPKCNYVVDNIDHLYPN 91
>UNIPROTKB|F1MUH4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GeneTree:ENSGT00650000093277
EMBL:DAAA02057282 IPI:IPI00714977 Ensembl:ENSBTAT00000057514
ArrayExpress:F1MUH4 Uniprot:F1MUH4
Length = 302
Score = 117 (46.2 bits), Expect = 0.00061, P = 0.00061
Identities = 39/139 (28%), Positives = 64/139 (46%)
Query: 222 LEEQIVNHEGDAEPTASVLNGFVAIMRYSRFLLFGFEEDEAELGIGSHKKRRKGLITQEI 281
LEE NHEGD + + ++ ++L + DE + +K+R
Sbjct: 177 LEECQRNHEGDEDDSHIRAQQACIEAKHDKYLA---DMDELFSQVDEKRKKR-------- 225
Query: 282 AETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEE-GHRTCPKTGQMLVHDR 340
IP C I +LMR+P I +G TYDR+ I ++ GH P T L ++
Sbjct: 226 -----DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQ 279
Query: 341 LVPNRALRNLIVQWCTAHG 359
L+PN A++ +I + + +G
Sbjct: 280 LIPNLAMKEVIDAFISENG 298
>FB|FBgn0027052 [details] [associations]
symbol:CHIP "CHIP" species:7227 "Drosophila melanogaster"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0030018 "Z
disc" evidence=IDA] InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0043161 EMBL:AE014134 Gene3D:1.25.40.10 GO:GO:0046332
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0051879
GO:GO:0004842 InterPro:IPR013105 Pfam:PF07719 GO:GO:0032436
GO:GO:0000209 GO:GO:0000151 GO:GO:0030544 KO:K09561 OMA:QENELHS
GO:GO:0030911 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 FlyBase:FBgn0027052 EMBL:AF129084
EMBL:AY069760 RefSeq:NP_477441.1 UniGene:Dm.392 SMR:Q9XYW6
IntAct:Q9XYW6 MINT:MINT-316282 STRING:Q9XYW6
EnsemblMetazoa:FBtr0080027 GeneID:34433 KEGG:dme:Dmel_CG5203
UCSC:CG5203-RA CTD:34433 InParanoid:Q9XYW6 GenomeRNAi:34433
NextBio:788473 Uniprot:Q9XYW6
Length = 289
Score = 103 (41.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 25/96 (26%), Positives = 47/96 (48%)
Query: 258 EEDEAELGIGSHKKRRKGLITQ-EIAETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRR 316
++ E E H K + ++ + +P C I +++ DPVI +G TY+R+
Sbjct: 182 KQQEIEQECDDHIKELNNIFSKVDERRKKREVPDFLCGKISFEILTDPVITPSGITYERK 241
Query: 317 SIARWMEE-GHRTCPKTGQMLVHDRLVPNRALRNLI 351
I ++ GH P T L D+L+PN +++ ++
Sbjct: 242 DIEEHLQRVGHFD-PVTRVKLTQDQLIPNFSMKEVV 276
Score = 56 (24.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 25/100 (25%), Positives = 47/100 (47%)
Query: 108 CGQSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPADDIELSEDVREQIDLMQRQARNAK 167
C Q S+ L + + + GHF L Q + + D F E + ++ DL + Q +N
Sbjct: 67 CCQDSRRALDIDGNLLKGHFF-LGQGLMEI-DNFD----EAIKHLQRAYDLSKEQKQNFG 120
Query: 168 LHIDKNDELLRLRLFSFLDEFEHGRVPNHVDLRSFFVEGL 207
I L R + ++ ++E R+ ++L+S+ + GL
Sbjct: 121 DDITLQLRLARKKRWNVMEE---KRIQQEIELQSY-LNGL 156
>WB|WBGene00002175 [details] [associations]
symbol:jac-1 species:6239 "Caenorhabditis elegans"
[GO:0005913 "cell-cell adherens junction" evidence=IDA] [GO:0045296
"cadherin binding" evidence=IPI] [GO:0010172 "embryonic body
morphogenesis" evidence=IGI] [GO:0032956 "regulation of actin
cytoskeleton organization" evidence=IGI] [GO:0032880 "regulation of
protein localization" evidence=IGI] InterPro:IPR000225
InterPro:IPR003961 InterPro:IPR016024 Pfam:PF00041 Pfam:PF00514
PROSITE:PS50176 PROSITE:PS50853 SMART:SM00060 SMART:SM00185
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 SUPFAM:SSF49265 GO:GO:0007155
GO:GO:0032880 GO:GO:0005913 GO:GO:0032956 GO:GO:0010172
eggNOG:NOG276924 GeneTree:ENSGT00690000101851 EMBL:AL110479
RefSeq:NP_001041007.1 RefSeq:NP_001041008.1 UniGene:Cel.7341
HSSP:Q13835 ProteinModelPortal:Q9U308 SMR:Q9U308 IntAct:Q9U308
PaxDb:Q9U308 EnsemblMetazoa:Y105C5B.21a GeneID:178451
KEGG:cel:CELE_Y105C5B.21 UCSC:Y105C5B.21b.1 CTD:178451
WormBase:Y105C5B.21a WormBase:Y105C5B.21b HOGENOM:HOG000020086
InParanoid:Q9U308 OMA:YVEAERF NextBio:901186 ArrayExpress:Q9U308
Uniprot:Q9U308
Length = 1254
Score = 125 (49.1 bits), Expect = 0.00064, P = 0.00064
Identities = 43/158 (27%), Positives = 76/158 (48%)
Query: 395 LIQQLANGSPRAKTVAAREIRLLAKTGKENRAFIAKAGAIPHLRNLLSTHNPVAQENSVT 454
+I+ L++ + A+ ++ L T + + + G IP L LL + P Q+N+
Sbjct: 696 VIEYLSSADKDKQLNASGYLQHLTYTDNQIKEETREYGGIPKLIALLRSDTPRIQKNACA 755
Query: 455 AMLNLSI---YDKNKSRIMDEEGCLGSIVKVLRFGLTTEARENAAATLFSLSAVHEYKKK 511
+ NLS D NK +M+ +G + I +VLR +E AAA L++LS+ K
Sbjct: 756 CLKNLSFGKENDANKLAVMEADG-VRLIAEVLRTTHDASVKEEAAAALWNLSSADMLKPV 814
Query: 512 IADESGAV---EALATLLRLGTPRGKKDAVTALFNLST 546
I + + + + +A +L +GT + + LF ST
Sbjct: 815 ILESATEILSQQVIAPVLAVGTSDPTRHFGSTLFKNST 852
>UNIPROTKB|E1B7G3 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:DAAA02057282 IPI:IPI00714977
Ensembl:ENSBTAT00000025473 ArrayExpress:E1B7G3 Uniprot:E1B7G3
Length = 319
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
Identities = 39/139 (28%), Positives = 64/139 (46%)
Query: 222 LEEQIVNHEGDAEPTASVLNGFVAIMRYSRFLLFGFEEDEAELGIGSHKKRRKGLITQEI 281
LEE NHEGD + + ++ ++L + DE + +K+R
Sbjct: 177 LEECQRNHEGDEDDSHIRAQQACIEAKHDKYLA---DMDELFSQVDEKRKKR-------- 225
Query: 282 AETFLSIPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEE-GHRTCPKTGQMLVHDR 340
IP C I +LMR+P I +G TYDR+ I ++ GH P T L ++
Sbjct: 226 -----DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQEQ 279
Query: 341 LVPNRALRNLIVQWCTAHG 359
L+PN A++ +I + + +G
Sbjct: 280 LIPNLAMKEVIDAFISENG 298
>ZFIN|ZDB-GENE-030131-2963 [details] [associations]
symbol:stub1 "STIP1 homology and U-Box containing
protein 1" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0030544 "Hsp70 protein
binding" evidence=ISS] [GO:0030911 "TPR domain binding"
evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=ISS] [GO:0046332 "SMAD binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051879 "Hsp90 protein
binding" evidence=ISS] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=ISS] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISS] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 ZFIN:ZDB-GENE-030131-2963 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0000151
GeneTree:ENSGT00650000093277 EMBL:CT573356 IPI:IPI00499851
Ensembl:ENSDART00000145075 Bgee:F1Q8K3 Uniprot:F1Q8K3
Length = 287
Score = 116 (45.9 bits), Expect = 0.00070, P = 0.00070
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 288 IPKDFCCPIMLDLMRDPVIISTGQTYDRRSIARWMEE-GHRTCPKTGQMLVHDRLVPNRA 346
IP C I +LMR+P I +G TYDR+ I ++ GH P T L D+L+PN A
Sbjct: 211 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSPLTQDQLIPNLA 269
Query: 347 LRNLIVQWCTAHG 359
++ +I + +G
Sbjct: 270 MKEVIDAFIQENG 282
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 715 638 0.00093 120 3 11 22 0.50 33
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 94
No. of states in DFA: 618 (66 KB)
Total size of DFA: 307 KB (2158 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 56.61u 0.12s 56.73t Elapsed: 00:00:03
Total cpu time: 56.64u 0.12s 56.76t Elapsed: 00:00:03
Start: Fri May 10 21:01:23 2013 End: Fri May 10 21:01:26 2013