Query 038219
Match_columns 435
No_of_seqs 190 out of 1135
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 14:57:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038219.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038219hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 2.7E-73 9.2E-78 572.6 35.8 397 29-433 4-411 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 6.7E-67 2.3E-71 526.0 34.0 383 29-433 4-399 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 2.2E-60 7.6E-65 475.1 34.9 359 33-431 2-381 (381)
4 1tzs_A Cathepsin E; hydrolase, 100.0 3.9E-55 1.3E-59 432.6 27.5 316 32-420 11-341 (351)
5 2x0b_A Renin; hydrolase-hormon 100.0 2.1E-55 7.2E-60 437.9 25.0 316 33-420 50-382 (383)
6 3psg_A Pepsinogen; hydrolase(a 100.0 1.2E-55 4.2E-60 438.5 22.8 314 33-420 45-369 (370)
7 1j71_A Candidapepsin, aspartic 100.0 4.7E-55 1.6E-59 429.2 26.1 309 33-419 2-322 (334)
8 1am5_A Pepsin, acid proteinase 100.0 5.5E-55 1.9E-59 427.0 26.2 311 34-420 2-323 (324)
9 3cms_A Chymosin B; hydrolase, 100.0 3.7E-55 1.3E-59 428.0 23.5 311 33-420 3-322 (323)
10 1mpp_A Pepsin; hydrolase(acid 100.0 1.7E-54 5.9E-59 429.7 28.0 323 30-420 4-354 (361)
11 1dpj_A Proteinase A; proteinas 100.0 1.8E-54 6E-59 424.3 27.2 312 34-420 3-328 (329)
12 2apr_A Rhizopuspepsin; hydrola 100.0 1.8E-54 6.3E-59 423.4 26.6 309 36-420 6-323 (325)
13 2qzx_A Candidapepsin-5; aspart 100.0 1.5E-54 5E-59 427.1 25.5 312 33-419 2-329 (342)
14 1htr_B Gastricsin; aspartyl pr 100.0 1.1E-54 3.7E-59 425.8 22.4 311 36-420 5-328 (329)
15 4aa9_A Chymosin; hydrolase, as 100.0 1.2E-54 4.2E-59 423.9 21.2 308 36-420 3-319 (320)
16 3k1w_A Renin; protease, altern 100.0 5.4E-54 1.9E-58 423.0 23.9 318 31-420 5-339 (341)
17 3fv3_A SAPP1P-secreted asparti 100.0 2.8E-53 9.4E-58 417.6 26.8 311 33-429 2-331 (339)
18 3pvk_A Candidapepsin-2; hydrol 100.0 2.3E-53 7.7E-58 418.7 25.0 313 33-419 2-329 (342)
19 1miq_A Plasmepsin; aspartic pr 100.0 3.8E-54 1.3E-58 428.5 19.6 310 33-421 51-374 (375)
20 3c9x_A Trichoderma reesei aspa 100.0 5.4E-53 1.9E-57 413.6 24.0 309 36-419 5-328 (329)
21 1oew_A Endothiapepsin; hydrola 100.0 9.6E-53 3.3E-57 411.9 22.9 307 36-419 5-328 (329)
22 1yg9_A Aspartic protease BLA G 100.0 3.8E-53 1.3E-57 414.8 19.3 309 33-420 6-328 (330)
23 2bju_A Plasmepsin II; aspartic 100.0 8E-53 2.7E-57 426.2 20.2 310 34-421 128-450 (453)
24 1wkr_A Polyporopepsin; hydrola 100.0 7.2E-52 2.5E-56 407.6 26.4 309 34-434 3-340 (340)
25 2ewy_A Beta-secretase 2; BACE2 100.0 6.1E-52 2.1E-56 414.7 26.0 327 37-431 6-359 (383)
26 1qdm_A Prophytepsin; aspartic 100.0 5.2E-52 1.8E-56 424.3 25.8 329 33-420 41-477 (478)
27 3qvc_A Histo-aspartic protease 100.0 1.8E-52 6.1E-57 424.1 21.5 310 33-421 126-449 (451)
28 3vf3_A Beta-secretase 1; struc 100.0 3.8E-51 1.3E-55 411.5 28.2 322 44-432 27-379 (402)
29 1ibq_A Aspergillopepsin; aspar 100.0 1.9E-51 6.6E-56 401.9 25.1 305 36-419 5-323 (325)
30 2qp8_A Beta-secretase 1; BACE1 100.0 1.9E-51 6.4E-56 412.7 25.1 321 43-431 19-371 (395)
31 3lpj_A Beta-secretase 1; alzhe 100.0 6.4E-51 2.2E-55 415.8 26.3 323 44-432 73-425 (455)
32 1izd_A Aspartic proteinase; su 100.0 2.7E-51 9.3E-56 400.5 21.4 297 43-419 13-321 (323)
33 1bxo_A Protein (penicillopepsi 100.0 4.8E-51 1.6E-55 398.8 19.9 296 43-419 13-321 (323)
34 1b5f_A Protein (cardosin A); h 100.0 2.8E-40 9.4E-45 308.8 17.6 228 35-319 4-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 2.3E-37 7.8E-42 289.6 20.4 223 160-420 3-240 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 2.7E-19 9.2E-24 142.0 8.4 93 34-145 3-95 (97)
37 1b5f_B Protein (cardosin A); h 99.6 7.5E-16 2.6E-20 119.8 8.2 78 336-420 5-86 (87)
38 2i1a_A DNA damage-inducible pr 94.7 0.21 7.2E-06 41.6 10.1 25 394-418 110-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 92.9 0.36 1.2E-05 40.3 7.9 26 394-419 109-134 (148)
40 2hs1_A HIV-1 protease; ultra-h 82.5 1.2 4E-05 34.4 3.7 26 48-75 10-35 (99)
41 1fmb_A EIAV protease; hydrolas 82.2 1.1 3.9E-05 34.8 3.6 26 47-74 9-34 (104)
42 2i1a_A DNA damage-inducible pr 79.6 1.4 4.9E-05 36.3 3.7 30 43-74 23-52 (148)
43 3ec0_A Protease; HIV-2, inhibi 77.4 2.1 7.1E-05 32.9 3.6 25 48-74 10-34 (99)
44 3liy_A Protease; hydrolase, hy 75.8 2.2 7.5E-05 33.5 3.4 28 48-75 12-42 (116)
45 3s8i_A Protein DDI1 homolog 1; 71.9 2.9 0.0001 34.7 3.5 30 43-74 21-50 (148)
46 2hah_A Protease, retropepsin; 71.8 3 0.0001 33.0 3.4 25 47-74 15-39 (116)
47 3sqf_A Protease; folded monome 66.1 5.3 0.00018 31.5 3.6 25 48-74 11-35 (114)
48 3slz_A GAG-Pro-POL polyprotein 56.5 9.5 0.00032 30.9 3.7 30 44-75 20-49 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 49.8 13 0.00044 32.4 3.6 26 47-74 9-34 (203)
50 2rsp_A RSV protease; hydrolase 48.0 12 0.00043 29.8 3.0 21 53-75 27-47 (124)
51 3c9x_A Trichoderma reesei aspa 44.5 24 0.00082 32.9 5.1 44 31-76 181-230 (329)
52 1b5f_A Protein (cardosin A); h 42.5 30 0.001 30.6 5.2 39 34-75 180-226 (239)
53 2apr_A Rhizopuspepsin; hydrola 40.2 23 0.00079 33.0 4.2 44 31-76 181-229 (325)
54 1lya_B Cathepsin D; lysosomal 39.8 30 0.001 30.5 4.7 40 34-76 91-137 (241)
55 1ibq_A Aspergillopepsin; aspar 39.4 30 0.001 32.2 4.8 43 31-75 176-224 (325)
56 1izd_A Aspartic proteinase; su 37.9 24 0.00083 32.9 3.9 41 33-75 179-224 (323)
57 1fmb_A EIAV protease; hydrolas 37.8 23 0.00079 27.3 3.0 34 263-311 5-38 (104)
58 1bxo_A Protein (penicillopepsi 37.7 26 0.00088 32.7 4.0 44 31-76 177-224 (323)
59 2hs1_A HIV-1 protease; ultra-h 37.5 23 0.00079 27.0 3.0 31 263-308 5-35 (99)
60 1oew_A Endothiapepsin; hydrola 35.9 37 0.0012 31.7 4.8 43 31-75 180-228 (329)
61 3ec0_A Protease; HIV-2, inhibi 33.4 27 0.00093 26.6 2.7 30 263-307 5-34 (99)
62 3aup_A SBG7S, BG, basic 7S glo 31.6 44 0.0015 32.1 4.7 43 32-75 216-275 (403)
63 2hah_A Protease, retropepsin; 31.2 35 0.0012 26.8 3.1 31 262-308 10-40 (116)
64 1t6e_X Xylanase inhibitor; two 30.0 28 0.00096 33.3 3.0 45 31-75 190-245 (381)
65 3ka2_A [L-Ala51;Gly51']HIV-1 p 29.7 42 0.0014 29.2 3.6 26 47-74 113-138 (203)
66 3slz_A GAG-Pro-POL polyprotein 29.6 36 0.0012 27.4 3.0 27 267-308 23-49 (132)
67 3pvk_A Candidapepsin-2; hydrol 29.3 69 0.0024 29.8 5.6 43 31-76 181-229 (342)
68 1htr_B Gastricsin; aspartyl pr 27.3 58 0.002 30.2 4.6 40 34-76 181-228 (329)
69 2x0b_A Renin; hydrolase-hormon 27.2 57 0.0019 31.3 4.6 40 34-76 234-280 (383)
70 1tzs_A Cathepsin E; hydrolase, 26.3 54 0.0019 30.8 4.2 42 32-76 191-239 (351)
71 1am5_A Pepsin, acid proteinase 25.6 76 0.0026 29.3 5.1 42 31-76 177-225 (324)
72 1mpp_A Pepsin; hydrolase(acid 25.5 72 0.0025 30.0 5.0 46 31-76 194-248 (361)
73 3fv3_A SAPP1P-secreted asparti 24.9 95 0.0033 28.7 5.7 43 31-76 184-231 (339)
74 1j71_A Candidapepsin, aspartic 24.8 74 0.0025 29.5 4.8 40 34-76 185-229 (334)
75 3vla_A EDGP; extracellular, in 24.8 51 0.0018 31.9 3.8 43 33-75 212-281 (413)
76 2qzx_A Candidapepsin-5; aspart 23.8 79 0.0027 29.4 4.8 42 32-76 183-229 (342)
77 3psg_A Pepsinogen; hydrolase(a 23.4 68 0.0023 30.4 4.3 43 31-76 221-270 (370)
78 3k1w_A Renin; protease, altern 22.9 52 0.0018 30.6 3.3 40 34-76 191-237 (341)
79 3cms_A Chymosin B; hydrolase, 22.9 70 0.0024 29.5 4.2 40 34-76 181-227 (323)
80 1yg9_A Aspartic protease BLA G 22.7 43 0.0015 31.2 2.7 40 34-76 185-230 (330)
81 1dpj_A Proteinase A; proteinas 22.1 62 0.0021 30.0 3.7 40 34-76 184-229 (329)
82 1qdm_A Prophytepsin; aspartic 21.6 68 0.0023 31.8 4.0 39 34-75 223-269 (478)
83 4aa9_A Chymosin; hydrolase, as 21.1 77 0.0026 29.1 4.1 40 34-76 178-224 (320)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.7e-73 Score=572.58 Aligned_cols=397 Identities=56% Similarity=0.963 Sum_probs=329.6
Q ss_pred CCCcceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCC
Q 038219 29 SKPKALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSC 108 (435)
Q Consensus 29 ~~~~~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~ 108 (435)
.+++++.+||++|..+++|+++|.||||||+|.|+|||||+++||+|.+|++|+||+.+.|.+..|..+..+.|..|.+
T Consensus 4 ~~~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s- 82 (413)
T 3vla_A 4 FRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFN- 82 (413)
T ss_dssp CCCSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSS-
T ss_pred CCCccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCccccc-
Confidence 4688999999999999999999999999999999999999999999999999999999999999999998888876654
Q ss_pred CCCCCCCCCCccceeecccC-C-ccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCCCCCcceEE
Q 038219 109 SPGPGCNNHTCSRFPANSIS-R-ESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGLATGVKGMA 186 (435)
Q Consensus 109 ~~~~~c~~~~~~~~~~y~y~-~-g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~GIl 186 (435)
..+++|.++.|.|.+. |+ + ++.. |++++|+|+|+..+ |. .++..+.+++++|||++.+...+...+++|||
T Consensus 83 ~~~~~c~~~~c~~~i~--Y~~d~~~~~-G~l~~Dtv~l~~~~--g~--~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIl 155 (413)
T 3vla_A 83 GPRPGCNNNTCGVFPE--NPVINTATG-GEVAEDVVSVESTD--GS--SSGRVVTVPRFIFSCAPTSLLQNLASGVVGMA 155 (413)
T ss_dssp CCBTTBCSSEEEECCE--ETTTTEECC-EEEEEEEEEEEEEC--SS--BEEEEEEEEEEEEEEECGGGGTTSCTTCCEEE
T ss_pred CCCCCCCCCcCcceee--cCcCCceee-eEEEEEEEEecccC--CC--CcccceeeCCEEEECcccccccCccccccccc
Confidence 3456788888999999 53 4 5555 99999999998654 32 11223678899999999864344556789999
Q ss_pred eeCCCCCchhhhhhhccCCCCceEEecCCCCCCCceEEEcCCCC---CCcCCCCC-ceEeeCccCCCCCCCcccCCCCCc
Q 038219 187 GLGRTQVSLPSQFSAAFNFDRKFSICLSSSTTSNGAVFFGDVPF---PNIDVSKS-LIYTPLILNPVHNEGLAFKGDPST 262 (435)
Q Consensus 187 GLg~~~~s~~~ql~~~~~i~~~FS~~L~~~~~~~G~l~fGg~d~---~~~~~~g~-~~~~Pl~~~~~~~~~~~~~~~~~~ 262 (435)
|||++.+|++.||.+++.++++||+||.+....+|+|+||++|. |+.++.++ +.|+||+.++.....++++.+...
T Consensus 156 GLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~ 235 (413)
T 3vla_A 156 GLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSV 235 (413)
T ss_dssp ECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCC
T ss_pred ccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCc
Confidence 99999999999999998888899999998655689999999974 11236788 999999987532222333333457
Q ss_pred ceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhh-cCCCCCCCCCCcccceec
Q 038219 263 DYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALL-FNIPRVKPIAPFGACFNS 341 (435)
Q Consensus 263 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~-~~~~~~~~~~~~~~C~~~ 341 (435)
+|.|.|++|+|+++.+.++...+.++++|.+++||||||++++||+++|++|+++|.+.+. +++++.+....+..||..
T Consensus 236 ~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~ 315 (413)
T 3vla_A 236 EYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFST 315 (413)
T ss_dssp SCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEEC
T ss_pred eEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceecc
Confidence 9999999999999999988877776665678999999999999999999999999998875 345544444456789988
Q ss_pred cCCCC----cccCeEEEEEcCCceEEEEcCCccEEEeCCceEEEEEEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEE
Q 038219 342 SFIGG----TTAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCLAFVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGF 417 (435)
Q Consensus 342 ~~~~~----~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGf 417 (435)
++... ..+|+|+|+|+|++++|+||+++|+++..++..|++++.......+.||||+.|||++|+|||++++||||
T Consensus 316 ~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGf 395 (413)
T 3vla_A 316 DNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGF 395 (413)
T ss_dssp TTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEE
T ss_pred CCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEE
Confidence 65321 36999999999855899999999999876678999888754322358999999999999999999999999
Q ss_pred eecCCcccCCccCccC
Q 038219 418 SSSLLSWQTTCSKLTS 433 (435)
Q Consensus 418 a~~~~~~~~~C~~~~~ 433 (435)
|++++.++++|+++++
T Consensus 396 a~~~~~~~~~c~~~~~ 411 (413)
T 3vla_A 396 SGTLLGSRTTCANFNF 411 (413)
T ss_dssp EEEGGGGTCCGGGSBC
T ss_pred EEecccCcccccCcCC
Confidence 9999999999999765
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=6.7e-67 Score=526.03 Aligned_cols=383 Identities=39% Similarity=0.750 Sum_probs=298.6
Q ss_pred CCC-cceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCC
Q 038219 29 SKP-KALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYS 107 (435)
Q Consensus 29 ~~~-~~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~ 107 (435)
.+| +.+.+||+.+..+++|+++|.||||||++.|+|||||+++||+|.+|++|+|++.+.|.+..|..+..+.|..|..
T Consensus 4 ~~~~~~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~s~~C~~~~~~~c~~c~~ 83 (403)
T 3aup_A 4 TKPINLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCLSCPA 83 (403)
T ss_dssp --CCCCEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTTBHHHHHTTCCCEEECSS
T ss_pred CCCCccEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCCCccccCccccCccccCC
Confidence 345 7889999987788999999999999999999999999999999999999999999999999999988888766653
Q ss_pred CCCCCCCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCC-CCCCCcceEE
Q 038219 108 CSPGPGCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLD-GLATGVKGMA 186 (435)
Q Consensus 108 ~~~~~~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~-~~~~~~~GIl 186 (435)
..+++|.++.|.|.+.|+++++++. |.+++|+|+|++.+ |.-+.+...+.++++.|||++..... +.....+|||
T Consensus 84 -~~~s~~~~~~~~~~~~Y~~d~~~~~-G~~~~Dtv~ig~~~--g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIl 159 (403)
T 3aup_A 84 -ASRPGCHKNTCGLMSTNPITQQTGL-GELGEDVLAIHATQ--GSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVA 159 (403)
T ss_dssp -SCBTTBCSSEEEEEEEETTTTEEEE-EEEEEEEEEEEECC--C----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEE
T ss_pred -CCCCCCCCCcceeEeecCCCCceee-EEEEEEEEEecccC--CccccccccccccCEEEECCcccccccCCCCCCceEE
Confidence 3345688889999999422245566 99999999997643 22001223367889999999886433 4446789999
Q ss_pred eeCCCCCchhhhhhhccCCCCceEEecCCCCCCCceEEEcCCCCCCcCC--C-C-----CceEeeCccCCCCCCCcccCC
Q 038219 187 GLGRTQVSLPSQFSAAFNFDRKFSICLSSSTTSNGAVFFGDVPFPNIDV--S-K-----SLIYTPLILNPVHNEGLAFKG 258 (435)
Q Consensus 187 GLg~~~~s~~~ql~~~~~i~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~--~-g-----~~~~~Pl~~~~~~~~~~~~~~ 258 (435)
|||++.++++.||.+....+++||+||.+.....|+|+||| |+ .++ . | ++.|+||+.++
T Consensus 160 GLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~--~~~~~~~G~~~~~~l~~~Pl~~~~---------- 226 (403)
T 3aup_A 160 GLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-AP--NNMRQFQNQDIFHDLAFTPLTITL---------- 226 (403)
T ss_dssp ECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HH--HHC--CTTCCTTTTEEEEECEECT----------
T ss_pred ECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-Cc--hhccccccccccCceeecccccCC----------
Confidence 99999999999997665557899999998655689999999 75 455 4 4 99999998763
Q ss_pred CCCcceEEEEeEEEECCEEe-ecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCccc
Q 038219 259 DPSTDYFIEIKSILIGGNVV-PLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGA 337 (435)
Q Consensus 259 ~~~~~y~v~l~~i~v~~~~~-~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~ 337 (435)
..+|.|.|++|+|+++.+ .++...+.+++.+.+++||||||++++||+++|++|+++|.+.+. .+++......+..
T Consensus 227 --~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~ 303 (403)
T 3aup_A 227 --QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLP-KQAQVKSVAPFGL 303 (403)
T ss_dssp --TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSC-GGGEECCCTTCSC
T ss_pred --CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhc-cccccCCCCCCCc
Confidence 369999999999999988 776666655555567899999999999999999999999987654 2222222223346
Q ss_pred ceeccCCCCcccCeEEEEEcCC-ceEEEEcCCccEEEeCCceEEEEEEeCCCCCCCeeeechhhhcccEEEEeCCCCEEE
Q 038219 338 CFNSSFIGGTTAPEIHLVLPGN-NRVWKIYGANSMVRVGKDAMCLAFVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLG 416 (435)
Q Consensus 338 C~~~~~~~~~~~P~i~~~f~g~-~~~~~ip~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIG 416 (435)
|+..... ..+|+|+|+|+|+ +++|+||+++|+++..++..|++++.......+.||||+.|||++|+|||++|+|||
T Consensus 304 c~~c~~~--~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIG 381 (403)
T 3aup_A 304 CFNSNKI--NAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVG 381 (403)
T ss_dssp EECGGGC--CCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEE
T ss_pred eEECCCc--CcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEE
Confidence 7765432 2689999999982 169999999999987656789988876532235799999999999999999999999
Q ss_pred E-eecCCcccCCccCccC
Q 038219 417 F-SSSLLSWQTTCSKLTS 433 (435)
Q Consensus 417 f-a~~~~~~~~~C~~~~~ 433 (435)
| |+++..+.++|+++.+
T Consensus 382 f~A~~~~~~~~~C~~~~~ 399 (403)
T 3aup_A 382 FSTSSLHSHGVKCADLFN 399 (403)
T ss_dssp EESSCGGGGTCCGGGSCC
T ss_pred EecccccccCCCcccccc
Confidence 9 9999999999998764
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.2e-60 Score=475.09 Aligned_cols=359 Identities=31% Similarity=0.588 Sum_probs=277.3
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGP 112 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~ 112 (435)
++.+||.++..+.+|+++|+|||| |+|||||+++||+|.+| ++++.+.|.+..|..+..+.+..|.......
T Consensus 2 ~~~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~---~~~~~~~C~s~~C~~~~~~~~~sc~~~~~~~ 73 (381)
T 1t6e_X 2 PVLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGG---QPPAEIPCSSPTCLLANAYPAPGCPAPSCGS 73 (381)
T ss_dssp CEEEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTT---CCCCCCBTTSHHHHHHHSSCCTTCCCCCC--
T ss_pred ceEEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCC---CCCCccCCCCchhccccCCCCCCCCCccCCc
Confidence 478999998889999999999998 99999999999999877 3577899999999887665443332100000
Q ss_pred CCCCCCc-cceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCce----EEecccCCcCCCCCCCcceEEe
Q 038219 113 GCNNHTC-SRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNL----IFSCGPTFLLDGLATGVKGMAG 187 (435)
Q Consensus 113 ~c~~~~~-~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~----~FG~~~~~~~~~~~~~~~GIlG 187 (435)
.|.+..| .|.+. |++|+.+.|.+++|+|+|++.+ |. +.++++ .|||++.+...++....+||||
T Consensus 74 ~~~~~~c~~f~i~--YgdGs~~~G~l~~Dtv~ig~~~--g~-------~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlG 142 (381)
T 1t6e_X 74 DKHDKPCTAYPYN--PVSGACAAGSLSHTRFVANTTD--GS-------KPVSKVNVGVLAACAPSKLLASLPRGSTGVAG 142 (381)
T ss_dssp ----CBCEECCBC--TTTCCBCCEEEEEEEEEEEEES--SS-------SEEEEEEEEEEEEECCGGGGTTSCTTEEEEEE
T ss_pred CcCCCcccccccc--ccCCceeeEEEEEEEEEeeccC--CC-------ccccceeeeeEeecCcccccCCCCCCCceEEE
Confidence 1234567 48998 8888864499999999998643 32 244443 6799987633344567899999
Q ss_pred eCCCCCchhhhhhhccCCCCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcceEEE
Q 038219 188 LGRTQVSLPSQFSAAFNFDRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDYFIE 267 (435)
Q Consensus 188 Lg~~~~s~~~ql~~~~~i~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y~v~ 267 (435)
||++.+|++.||.+++.++++||+||.+. ..|+|+|||++....++.+++.|+||+.++. ..+|.|.
T Consensus 143 Lg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~-----------~~~y~v~ 209 (381)
T 1t6e_X 143 LANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGG-----------SPAHYIS 209 (381)
T ss_dssp CSSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCCTT-----------CCSCEEC
T ss_pred eCCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccCCC-----------CcceEEE
Confidence 99999999999999887788999999885 5899999998641013679999999987532 2467799
Q ss_pred EeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhh------cCCCCC-CCCCCccccee
Q 038219 268 IKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALL------FNIPRV-KPIAPFGACFN 340 (435)
Q Consensus 268 l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~------~~~~~~-~~~~~~~~C~~ 340 (435)
+++|+|+++.+.++...+. ++++||||||++++||+++|++|+++|.+.+. .++++. .....+..|++
T Consensus 210 l~~i~vg~~~~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~ 284 (381)
T 1t6e_X 210 ARSIVVGDTRVPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYD 284 (381)
T ss_dssp EEEEEETTEECCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEE
T ss_pred EEEEEEcCEEecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCC
Confidence 9999999998876654442 36799999999999999999999999988764 134433 22345578998
Q ss_pred ccCCCC----cccCeEEEEEcCCceEEEEcCCccEEEeCCceEEEEEEeCCC-----CCCCeeeechhhhcccEEEEeCC
Q 038219 341 SSFIGG----TTAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCLAFVDGGV-----NPRTSVVIGGYQLEDNLLEFNLA 411 (435)
Q Consensus 341 ~~~~~~----~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~~~~~~~~-----~~~~~~ILG~~flr~~yvvfD~~ 411 (435)
.++... ..+|+|+|+|+| +++|+||+++|++...++..|++++.... ...+.||||+.|||++|+|||++
T Consensus 285 ~~~~~~~~~~~~~P~i~f~f~g-g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~ 363 (381)
T 1t6e_X 285 TKTLGNNLGGYAVPNVQLGLDG-GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDME 363 (381)
T ss_dssp GGGCCEETTEECCCCEEEEETT-SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETT
T ss_pred CCCCcccccCCcCCeEEEEECC-CcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECC
Confidence 764321 268999999987 59999999999998766789999887653 11357999999999999999999
Q ss_pred CCEEEEeecCCcccCCccCc
Q 038219 412 KSRLGFSSSLLSWQTTCSKL 431 (435)
Q Consensus 412 ~~rIGfa~~~~~~~~~C~~~ 431 (435)
|+|||||+.+. .++|+++
T Consensus 364 ~~riGfA~~~~--~~~cs~~ 381 (381)
T 1t6e_X 364 KKRLGFSRLPH--FTGCGGL 381 (381)
T ss_dssp TTEEEEEECCT--TCCSCC-
T ss_pred CCEEEEecccC--CCCCCCC
Confidence 99999999887 7899864
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.9e-55 Score=432.59 Aligned_cols=316 Identities=17% Similarity=0.211 Sum_probs=249.5
Q ss_pred cceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCC
Q 038219 32 KALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPG 111 (435)
Q Consensus 32 ~~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~ 111 (435)
..+.+||.+ ..+.+|+++|.||||+|++.|+|||||+++||+|..| .+..|..+..|++. .+
T Consensus 11 ~~~~~~l~n-~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~------~S 72 (351)
T 1tzs_A 11 QSAKEPLIN-YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC-----------TSPACKTHSRFQPS------QS 72 (351)
T ss_dssp ---CCTTGG-GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSGGGTTSCCBCGG------GC
T ss_pred Cccceecee-cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCC-----------CccccCCCCcCCcc------cC
Confidence 445678875 4578999999999999999999999999999999765 44567766666653 35
Q ss_pred CCCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCC-CCCCcceEEeeCC
Q 038219 112 PGCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDG-LATGVKGMAGLGR 190 (435)
Q Consensus 112 ~~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~-~~~~~~GIlGLg~ 190 (435)
+++....|.|.+. |++|++. |.+++|+|+|+ + +.++++.|||++...... .....+||||||+
T Consensus 73 sT~~~~~~~~~i~--Yg~Gs~~-G~~~~D~v~ig------~-------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 136 (351)
T 1tzs_A 73 STYSQPGQSFSIQ--YGTGSLS-GIIGADQVSVE------G-------LTVVGQQFGESVTEPGQTFVDAEFDGILGLGY 136 (351)
T ss_dssp TTCBCCSCEEEEE--SSSCEEE-EEEEEEEEEET------T-------EEEEEEEEEEECSCCCGGGGGCSCSEEEECSC
T ss_pred cceEECCCEEEEE--eCCCCeE-EEEEEeEEEEC------C-------eEECCeEEEEEEeccccccccCCCceEEecCC
Confidence 5677888999999 8888877 99999999994 3 478899999998763221 1346799999999
Q ss_pred CCCc------hhhhhhhccCC-CCceEEecCCCCCC--CceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCC
Q 038219 191 TQVS------LPSQFSAAFNF-DRKFSICLSSSTTS--NGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPS 261 (435)
Q Consensus 191 ~~~s------~~~ql~~~~~i-~~~FS~~L~~~~~~--~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~ 261 (435)
+.++ ++.+|.+++.+ +++||+||.+.... .|.|+|||+|+ .++.|++.|+|+.. .
T Consensus 137 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~ 200 (351)
T 1tzs_A 137 PSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDH--SHFSGSLNWVPVTK--------------Q 200 (351)
T ss_dssp GGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCG--GGBCSCCEEEECSE--------------E
T ss_pred ccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCH--HHcCCceEEEecCC--------------C
Confidence 7654 66789999888 58899999986333 79999999997 78899999999975 3
Q ss_pred cceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceec
Q 038219 262 TDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNS 341 (435)
Q Consensus 262 ~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~ 341 (435)
.+|.|.+++|+|+++.+... ....+||||||++++||+++|++|.+++.+... . ......|+..
T Consensus 201 ~~~~v~l~~i~v~~~~~~~~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~------~-g~~~~~C~~~ 264 (351)
T 1tzs_A 201 AYWQIALDNIQVGGTVMFCS---------EGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV------D-GEYAVECANL 264 (351)
T ss_dssp TTEEEEEEEEEETTEEEECT---------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC------S-SSEEECGGGG
T ss_pred ceEEEEeCEEEECCceEEcC---------CCceEEeccCCcceeCCHHHHHHHHHHhCCccc------C-CeEEEeCCCC
Confidence 68999999999999875421 135799999999999999999999988743221 1 1123468754
Q ss_pred cCCCCcccCeEEEEEcCCceEEEEcCCccEEEeCC--ceEEE-EEEeCCCC--CCCeeeechhhhcccEEEEeCCCCEEE
Q 038219 342 SFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGK--DAMCL-AFVDGGVN--PRTSVVIGGYQLEDNLLEFNLAKSRLG 416 (435)
Q Consensus 342 ~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~--~~~C~-~~~~~~~~--~~~~~ILG~~flr~~yvvfD~~~~rIG 416 (435)
. .+|+|+|+|+| ++|+||+++|+++... +..|+ ++...+.. ..+.||||+.|||++|+|||++++|||
T Consensus 265 ~-----~~P~i~f~f~g--~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rig 337 (351)
T 1tzs_A 265 N-----VMPDVTFTING--VPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVG 337 (351)
T ss_dssp G-----GSCCEEEEETT--EEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEE
T ss_pred c-----cCCcEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEE
Confidence 3 68999999976 9999999999987642 35799 46654321 245799999999999999999999999
Q ss_pred Eeec
Q 038219 417 FSSS 420 (435)
Q Consensus 417 fa~~ 420 (435)
||+.
T Consensus 338 fA~~ 341 (351)
T 1tzs_A 338 LAPA 341 (351)
T ss_dssp EEEB
T ss_pred EEEC
Confidence 9984
No 5
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.1e-55 Score=437.89 Aligned_cols=316 Identities=16% Similarity=0.246 Sum_probs=252.1
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGP 112 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~ 112 (435)
...+||.+ ..+.+|+++|+||||||+|+|+|||||+++||+|..|.. .+..|..+..|++. .++
T Consensus 50 ~~~~~l~n-~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~---------~~~~C~~~~~y~~~------~Ss 113 (383)
T 2x0b_A 50 TSSVILTN-YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSR---------LYTACVYHKLFDAS------DSS 113 (383)
T ss_dssp -CEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCT---------TSHHHHTSCCBCGG------GCT
T ss_pred cceEeeee-cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCC---------CcccccCCCCCCCC------CCC
Confidence 45688986 467899999999999999999999999999999987621 12467766666653 456
Q ss_pred CCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCC-CCCCCcceEEeeCCC
Q 038219 113 GCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLD-GLATGVKGMAGLGRT 191 (435)
Q Consensus 113 ~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~ 191 (435)
++....|.|.+. |++|++. |.+++|+|+|+ + +.++ +.|||++.+.+. ......+||||||++
T Consensus 114 T~~~~~~~~~i~--Yg~Gs~~-G~~~~Dtv~ig------~-------~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~ 176 (383)
T 2x0b_A 114 SYKHNGTELTLR--YSTGTVS-GFLSQDIITVG------G-------ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFI 176 (383)
T ss_dssp TCEEEEEEEEEE--CSSCEEE-EEEEEEEEEET------T-------EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCG
T ss_pred cEEECCcEEEEE--cCCccEE-EEEEeeEEEEc------C-------ceEE-EEEEEEEecCCcccccCCCceEeccCCC
Confidence 677788999999 8888887 99999999994 3 4788 999999876321 123468999999997
Q ss_pred CCc------hhhhhhhccCC-CCceEEecCCCCC----CCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCC
Q 038219 192 QVS------LPSQFSAAFNF-DRKFSICLSSSTT----SNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDP 260 (435)
Q Consensus 192 ~~s------~~~ql~~~~~i-~~~FS~~L~~~~~----~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~ 260 (435)
.++ +..+|.+++.+ +++||+||.+... .+|+|+|||+|+ .++.|++.|+|+..
T Consensus 177 ~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~--~~y~G~l~~~pv~~-------------- 240 (383)
T 2x0b_A 177 EQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDP--QHYEGNFHYINLIK-------------- 240 (383)
T ss_dssp GGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCG--GGEEEEEEEEEBSS--------------
T ss_pred ccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcCh--HHcCCceEEEEcCC--------------
Confidence 654 56789999888 5889999998633 389999999997 67889999999974
Q ss_pred CcceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCccccee
Q 038219 261 STDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFN 340 (435)
Q Consensus 261 ~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~ 340 (435)
..+|.|.+++|+|+++.+... +.+.+||||||+++++|+++|++|.+++.+.. ..+ .....|+.
T Consensus 241 ~~~w~v~l~~i~v~~~~~~~~---------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~------~~g-~~~v~C~~ 304 (383)
T 2x0b_A 241 TGVWQIQMKGVSVGSSTLLCE---------DGCLALVDTGASYISGSTSSIEKLMEALGAKK------RLF-DYVVKCNE 304 (383)
T ss_dssp TTSCEEEECEEEESSCCCBST---------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEE------CSS-CEEEEGGG
T ss_pred CceEEEEEeEEEeCCceEEcC---------CCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc------cCC-cEEEeccc
Confidence 369999999999999764321 13679999999999999999999998874321 111 12346876
Q ss_pred ccCCCCcccCeEEEEEcCCceEEEEcCCccEEEeCC--ceEEE-EEEeCCCC--CCCeeeechhhhcccEEEEeCCCCEE
Q 038219 341 SSFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGK--DAMCL-AFVDGGVN--PRTSVVIGGYQLEDNLLEFNLAKSRL 415 (435)
Q Consensus 341 ~~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~--~~~C~-~~~~~~~~--~~~~~ILG~~flr~~yvvfD~~~~rI 415 (435)
.+ .+|+|+|+|+| ++|+||+++|+++... +..|+ ++...+.. ..+.||||++|||++|+|||++|+||
T Consensus 305 ~~-----~~P~i~f~~~g--~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rI 377 (383)
T 2x0b_A 305 GP-----TLPDISFHLGG--KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRI 377 (383)
T ss_dssp TT-----TCCCEEEEETT--EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEE
T ss_pred cc-----cCceEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEE
Confidence 43 68999999987 9999999999987653 45899 57664321 24689999999999999999999999
Q ss_pred EEeec
Q 038219 416 GFSSS 420 (435)
Q Consensus 416 Gfa~~ 420 (435)
|||++
T Consensus 378 GfA~a 382 (383)
T 2x0b_A 378 GFALA 382 (383)
T ss_dssp EEEEE
T ss_pred eEEEc
Confidence 99973
No 6
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.2e-55 Score=438.53 Aligned_cols=314 Identities=18% Similarity=0.200 Sum_probs=248.2
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGP 112 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~ 112 (435)
....||.+ ..+.+|+++|+||||||+|+|+|||||+++||+|..| .+..|..+..|++. .++
T Consensus 45 ~~~~~l~n-~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C-----------~~~~C~~~~~y~~~------~Ss 106 (370)
T 3psg_A 45 IGDEPLEN-YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-----------SSLACSDHNQFNPD------DSS 106 (370)
T ss_dssp SCCCTTGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSGGGTTSCCBCGG------GCT
T ss_pred cceeccee-ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCC-----------CCcccCCCCCCCCc------cCc
Confidence 45667775 4578999999999999999999999999999999754 45578777777663 355
Q ss_pred CCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCC-CCCCCcceEEeeCCC
Q 038219 113 GCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLD-GLATGVKGMAGLGRT 191 (435)
Q Consensus 113 ~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~ 191 (435)
++....|.|.+. |++|++. |.+++|+|+|+ + +.++++.|||++..... ......+||||||++
T Consensus 107 T~~~~~~~~~i~--Yg~Gs~~-G~~~~Dtv~ig------~-------~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~ 170 (370)
T 3psg_A 107 TFEATSQELSIT--YGTGSMT-GILGYDTVQVG------G-------ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYP 170 (370)
T ss_dssp TCEEEEEEEEEE--SSSCEEE-EEEEEEEEEET------T-------EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCG
T ss_pred CcEECCcEEEEE--eCCceEE-EEEEEEEEeeC------C-------cccCCeEEEEEEeecccccccCCccceeccCCc
Confidence 566778999999 8999987 99999999994 3 47889999999887332 123468999999987
Q ss_pred CC------chhhhhhhccCC-CCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcce
Q 038219 192 QV------SLPSQFSAAFNF-DRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDY 264 (435)
Q Consensus 192 ~~------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y 264 (435)
.+ ++..+|.+++.| +++||+||.+....+|+|+|||+|+ .++.|++.|+|+.. ..+|
T Consensus 171 ~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~--~~y~g~l~~~pv~~--------------~~~w 234 (370)
T 3psg_A 171 SISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDS--SYYTGSLNWVPVSV--------------EGYW 234 (370)
T ss_dssp GGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCG--GGBSSCCEEEECSE--------------ETTE
T ss_pred cccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeCh--HhcCCcceeecccc--------------ccee
Confidence 65 467789999988 4789999998655689999999998 78899999999975 3689
Q ss_pred EEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceeccCC
Q 038219 265 FIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSSFI 344 (435)
Q Consensus 265 ~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~~ 344 (435)
.|.+++|+|+++.+... +.+.+||||||+++++|++++++|.+++.+... ........|...
T Consensus 235 ~v~l~~i~v~g~~~~~~---------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~------~~g~~~v~C~~~--- 296 (370)
T 3psg_A 235 QITLDSITMDGETIACS---------GGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN------SDGEMVISCSSI--- 296 (370)
T ss_dssp EEEECEEESSSSEEECT---------TCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC------TTCCEECCGGGG---
T ss_pred EEEEeEEEECCEEEecC---------CCceEEEcCCCCcEECCHHHHHHHHHHhCCccc------CCCcEEEECCCc---
Confidence 99999999999876532 136799999999999999999999888743211 111123356544
Q ss_pred CCcccCeEEEEEcCCceEEEEcCCccEEEeCCceEEEE-EEeCCC--CCCCeeeechhhhcccEEEEeCCCCEEEEeec
Q 038219 345 GGTTAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCLA-FVDGGV--NPRTSVVIGGYQLEDNLLEFNLAKSRLGFSSS 420 (435)
Q Consensus 345 ~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~~-~~~~~~--~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~~ 420 (435)
..+|+|+|+|+| ++++||+++|+++ .+ ..|+. +...+. ..++.||||++|||++|+|||++|+|||||++
T Consensus 297 --~~lP~i~f~~~g--~~~~l~~~~yi~~-~~-~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a 369 (370)
T 3psg_A 297 --DSLPDIVFTIDG--VQYPLSPSAYILQ-DD-DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPV 369 (370)
T ss_dssp --GGCCCEEEEETT--EEEEECHHHHEEE-CS-SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred --ccCCcEEEEECC--EEEEECHHHhccc-CC-CEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEc
Confidence 378999999987 9999999999998 33 45985 554321 12347999999999999999999999999974
No 7
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4.7e-55 Score=429.23 Aligned_cols=309 Identities=15% Similarity=0.201 Sum_probs=247.4
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCC--CCCCCCCcccccCCcccccccccCCCcccCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCD--QGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSP 110 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~--~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~ 110 (435)
++.+||.+ .+.+|+++|.||||||++.|+|||||+++||+|. +|.... ..+.+..|..+..|++. .
T Consensus 2 ~~~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~----~~~~~~~C~~~~~y~~~------~ 69 (334)
T 1j71_A 2 DVPTTLIN--EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTY----SGQTNNFCKQEGTFDPS------S 69 (334)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCS----TTCCTTGGGSSCCBCGG------G
T ss_pred ceeEEEec--CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcc----cccccccccCCCcCCcc------c
Confidence 57899998 5789999999999999999999999999999865 452110 01223467766666653 3
Q ss_pred CCCCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCCCCCcceEEeeCC
Q 038219 111 GPGCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGLATGVKGMAGLGR 190 (435)
Q Consensus 111 ~~~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~ 190 (435)
++++....|.|.+. |++|+...|.+++|+|+|+ + +.++++.|||++.. ...+||||||+
T Consensus 70 SsT~~~~~~~~~i~--Yg~Gs~~~G~~~~D~v~~g------~-------~~~~~~~fg~~~~~------~~~~GilGLg~ 128 (334)
T 1j71_A 70 SSSAQNLNQDFSIE--YGDLTSSQGSFYKDTVGFG------G-------ISIKNQQFADVTTT------SVDQGIMGIGF 128 (334)
T ss_dssp CTTCEEEEEEEEEE--BTTSCEEEEEEEEEEEEET------T-------EEEEEEEEEEEEEE------SSSSCEEECSC
T ss_pred CCCcccCCCceEEE--ECCCCEEEEEEEEEEEEEC------C-------EEEccEEEEEEEec------CCCccEEEEcC
Confidence 45566778999999 8888754499999999994 3 47889999999875 24799999999
Q ss_pred CCC--------chhhhhhhccCC-CCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCC
Q 038219 191 TQV--------SLPSQFSAAFNF-DRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPS 261 (435)
Q Consensus 191 ~~~--------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~ 261 (435)
+.. +++.+|.+++.+ +++||+||.+.....|.|+|||+|+ .++.|++.|+|++.+
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------- 192 (334)
T 1j71_A 129 TADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDN--AKYTGTLTALPVTSS-------------- 192 (334)
T ss_dssp GGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEET--TSEEEEEEEEECCCS--------------
T ss_pred CcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeech--HHccCceEEEEccCC--------------
Confidence 754 688999999998 4789999998645689999999997 678899999999753
Q ss_pred cceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCc-cccee
Q 038219 262 TDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPF-GACFN 340 (435)
Q Consensus 262 ~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~-~~C~~ 340 (435)
.+|.|.+++|+|+++.+..+ ..+||||||++++||+++|++|.+++.+... . ...... ..|+
T Consensus 193 ~~~~v~l~~i~v~g~~~~~~-----------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~-~~~~~~~~~C~- 255 (334)
T 1j71_A 193 VELRVHLGSINFDGTSVSTN-----------ADVVLDSGTTITYFSQSTADKFARIVGATWD----S-RNEIYRLPSCD- 255 (334)
T ss_dssp SSCEEEEEEEEETTEEEEEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE----T-TTTEEECSSSC-
T ss_pred CeEEEEEeEEEECCEeccCC-----------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc----C-CCceEEEEcCC-
Confidence 58999999999999877532 4699999999999999999999999864431 1 111112 4564
Q ss_pred ccCCCCcccCeEEEEEcCCceEEEEcCCccEEEeCCceEEEEEEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEee
Q 038219 341 SSFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCLAFVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFSS 419 (435)
Q Consensus 341 ~~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~ 419 (435)
.+|.|+|+|.+ +++++||+++|+++..++..|+..+... +.||||+.|||++|+|||++++|||||+
T Consensus 256 -------~~p~i~f~f~~-g~~~~i~~~~y~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~ 322 (334)
T 1j71_A 256 -------LSGDAVFNFDQ-GVKITVPLSELILKDSDSSICYFGISRN----DANILGDNFLRRAYIVYDLDDKTISLAQ 322 (334)
T ss_dssp -------CCSEEEEEEST-TCEEEEEGGGGEEECSSSSCEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred -------CCCceEEEEcC-CcEEEECHHHheeecCCCCeeEEEEeEC----CCcEEChHhhccEEEEEECCCCEEEEEe
Confidence 37999999965 4999999999999876555698644432 2589999999999999999999999997
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=5.5e-55 Score=427.03 Aligned_cols=311 Identities=17% Similarity=0.239 Sum_probs=250.9
Q ss_pred eEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCC
Q 038219 34 LALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPG 113 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~ 113 (435)
+.+||.+ ..+.+|+++|.||||||++.|+|||||+++||+|..| .+..|..+..|++. .+++
T Consensus 2 ~~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C-----------~~~~C~~~~~y~~~------~SsT 63 (324)
T 1am5_A 2 VTEQMKN-EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC-----------SAQACSNHNKFKPR------QSST 63 (324)
T ss_dssp EEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTC-----------CSHHHHTSCCBCGG------GCTT
T ss_pred ceeeeec-CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCC-----------CcccccCCCcCCCc------cCCC
Confidence 5688886 4678999999999999999999999999999999765 44567666666653 3556
Q ss_pred CCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCC-CCCcceEEeeCCCC
Q 038219 114 CNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGL-ATGVKGMAGLGRTQ 192 (435)
Q Consensus 114 c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~-~~~~~GIlGLg~~~ 192 (435)
+....|.|.+. |++|++. |.+++|+|+++ + +.++++.|||++......+ ....+||||||++.
T Consensus 64 ~~~~~~~~~i~--Yg~Gs~~-G~~~~D~v~~g------~-------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~ 127 (324)
T 1am5_A 64 YVETGKTVDLT--YGTGGMR-GILGQDTVSVG------G-------GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPS 127 (324)
T ss_dssp CEEEEEEEEEE--CSSCEEE-EEEEEEEEESS------S-------SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGG
T ss_pred eEeCCcEEEEE--ECCCCeE-EEEEECceeEC------C-------cEEcccEEEEEEecccccccCCCCceEEecCCcc
Confidence 66778999999 8888887 99999999994 3 3788999999987633222 34689999999976
Q ss_pred C------chhhhhhhccCC-CCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcceE
Q 038219 193 V------SLPSQFSAAFNF-DRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDYF 265 (435)
Q Consensus 193 ~------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y~ 265 (435)
. +++.+|.+++.+ +++||+||.+.....|.|+|||+|+ .++.|++.|+|+.. ..+|.
T Consensus 128 ~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~~ 191 (324)
T 1am5_A 128 IAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDN--SHYTGSIHWIPVTA--------------EKYWQ 191 (324)
T ss_dssp GCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCG--GGBCSCCEEEEEEE--------------ETTEE
T ss_pred ccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCH--HHcCCceEEEecCC--------------CcEEE
Confidence 4 467789999888 5789999998655689999999997 78899999999975 36899
Q ss_pred EEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceeccCCC
Q 038219 266 IEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSSFIG 345 (435)
Q Consensus 266 v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~~~ 345 (435)
|.+++|+|+++.+... + ..+||||||++++||+++|++|.+++.+. . ..+ .....|+...
T Consensus 192 v~l~~i~v~~~~~~~~---------~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~-----~~g-~~~~~C~~~~--- 251 (324)
T 1am5_A 192 VALDGITVNGQTAACE---------G-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E-----NQG-EMMGNCASVQ--- 251 (324)
T ss_dssp EEECEEEETTEECCCC---------C-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E-----CCC-CEECCTTSSS---
T ss_pred EEEeEEEECCceeecc---------C-ceEEEecCCccEECCHHHHHHHHHHhCCc-c-----cCC-cEEEeCCCcc---
Confidence 9999999999865321 1 56999999999999999999999887533 1 111 1234576542
Q ss_pred CcccCeEEEEEcCCceEEEEcCCccEEEeCCceEEE-EEEeCCC--CCCCeeeechhhhcccEEEEeCCCCEEEEeec
Q 038219 346 GTTAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCL-AFVDGGV--NPRTSVVIGGYQLEDNLLEFNLAKSRLGFSSS 420 (435)
Q Consensus 346 ~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~~ 420 (435)
.+|+|+|+|+| ++|+||+++|+++. +..|+ ++...+. ...+.||||+.|||++|+|||++++|||||++
T Consensus 252 --~~P~i~f~f~g--~~~~i~~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a 323 (324)
T 1am5_A 252 --SLPDITFTING--VKQPLPPSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPA 323 (324)
T ss_dssp --SSCCEEEEETT--EEEEECHHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEB
T ss_pred --cCCcEEEEECC--EEEEECHHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEEC
Confidence 68999999976 99999999999986 46798 5665431 12458999999999999999999999999973
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=3.7e-55 Score=428.02 Aligned_cols=311 Identities=15% Similarity=0.164 Sum_probs=248.6
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGP 112 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~ 112 (435)
.-.+||.+ ..+.+|+++|.||||||++.|+|||||+++||+|..| .+..|..+..|++. .++
T Consensus 3 ~~~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C-----------~~~~C~~~~~y~~~------~Ss 64 (323)
T 3cms_A 3 VASVPLTN-YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYC-----------KSNACKNHQRFDPR------KSS 64 (323)
T ss_dssp CEEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG------GCT
T ss_pred cceeeeEe-ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCC-----------CcccccCCCCCCCc------cCC
Confidence 34678886 4678999999999999999999999999999999765 44567766666653 355
Q ss_pred CCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCC-CCCCcceEEeeCCC
Q 038219 113 GCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDG-LATGVKGMAGLGRT 191 (435)
Q Consensus 113 ~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~-~~~~~~GIlGLg~~ 191 (435)
++....|.|.+. |++|++. |.+++|+|+|+ + +.++++.|||++...... .....+||||||++
T Consensus 65 T~~~~~~~~~i~--Yg~Gs~~-G~~~~D~v~ig------~-------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 128 (323)
T 3cms_A 65 TFQNLGKPLSIH--YGTGSMQ-GILGYDTVTVS------N-------IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYP 128 (323)
T ss_dssp TCEEEEEEEEEE--ETTEEEE-EEEEEEEEEET------T-------EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCG
T ss_pred CeEECCcEEEEE--eCCCCeE-EEEEEEEEEEC------C-------eEEeccEEEEEEecccccccccCCceEEecCcc
Confidence 667778999999 8888877 99999999994 3 478899999998763211 12357999999987
Q ss_pred CC------chhhhhhhccCC-CCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcce
Q 038219 192 QV------SLPSQFSAAFNF-DRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDY 264 (435)
Q Consensus 192 ~~------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y 264 (435)
.. +++.+|.+++.+ +++||+||.+... .|.|+|||+|+ .++.|++.|+|+.. ..+|
T Consensus 129 ~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~-~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~ 191 (323)
T 3cms_A 129 SLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQ-ESMLTLGAIDP--SYYTGSLHWVPVTV--------------QQYW 191 (323)
T ss_dssp GGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSS-CEEEEESCCCG--GGEEEEEEEEECSS--------------BTTB
T ss_pred hhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCC-CEEEEECCCCh--hhccCceEEEECcc--------------CCeE
Confidence 54 467789999888 5889999998633 49999999997 67889999999974 3689
Q ss_pred EEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceeccCC
Q 038219 265 FIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSSFI 344 (435)
Q Consensus 265 ~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~~ 344 (435)
.|.+++|+|+++.+.++. ...+||||||++++||+++|++|.+++.+... ........|+...
T Consensus 192 ~v~l~~i~v~~~~~~~~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------~~g~~~~~C~~~~-- 254 (323)
T 3cms_A 192 QFTVDSVTISGVVVACEG---------GCQAILDTGTSKLVGPSSDILNIQQAIGATQN------QYGEFDIDCDNLS-- 254 (323)
T ss_dssp EEEEEEEEETTEEEESTT---------CEEEEECTTCCSEEECHHHHHHHHHHHTCEEE------TTTEEEECTTCTT--
T ss_pred EEEEeeEEECCEEeecCC---------CcEEEEecCCccEeCCHHHHHHHHHHhCCeec------CCCcEEEECCCCc--
Confidence 999999999998775431 35799999999999999999999988753211 1111223576533
Q ss_pred CCcccCeEEEEEcCCceEEEEcCCccEEEeCCceEEEE-EEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEeec
Q 038219 345 GGTTAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCLA-FVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFSSS 420 (435)
Q Consensus 345 ~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~~ 420 (435)
.+|+|+|+|+| ++++||+++|+++ ++..|+. +..... .+.||||+.|||++|+|||++++|||||+.
T Consensus 255 ---~~P~i~f~f~g--~~~~i~~~~y~~~--~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 322 (323)
T 3cms_A 255 ---YMPTVVFEING--KMYPLTPSAYTSQ--DQGFCTSGFQSENH--SQKWILGDVFIREYYSVFDRANNLVGLAKA 322 (323)
T ss_dssp ---TSCCEEEEETT--EEEEECHHHHEEE--ETTEEEESEEEC-----CCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ---cCceEEEEECC--EEEEECHHHhccC--CCCEEEEEEEeCCC--CCcEEECHHHhhceEEEEECCCCEEEEEEC
Confidence 68999999976 9999999999998 3468985 666532 357999999999999999999999999973
No 10
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.7e-54 Score=429.71 Aligned_cols=323 Identities=14% Similarity=0.146 Sum_probs=254.2
Q ss_pred CCcceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCC
Q 038219 30 KPKALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCS 109 (435)
Q Consensus 30 ~~~~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~ 109 (435)
..+...+||.. ..+.+|+++|.||||+|++.|+|||||+++||+|..|.. +..|..+..|++.
T Consensus 4 ~g~~~~~~l~~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~----------~~~C~~~~~y~~~------ 66 (361)
T 1mpp_A 4 DGSVDTPGLYD-FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDN----------SEGCVGKRFFDPS------ 66 (361)
T ss_dssp -CCEEEEEEEE-TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCG----------GGTCCSSCCBCGG------
T ss_pred CCccceEEeec-CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCC----------CccCCCCCcCCCc------
Confidence 45667899987 467899999999999999999999999999999976521 3457666566653
Q ss_pred CCCCCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcC-----C-CCCCCcc
Q 038219 110 PGPGCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLL-----D-GLATGVK 183 (435)
Q Consensus 110 ~~~~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~-----~-~~~~~~~ 183 (435)
.++++....|.|.+. |++|++. |.+++|+|+|+ + +.++++.|||++.... . ......+
T Consensus 67 ~SsT~~~~~~~~~i~--Yg~Gs~~-G~~~~D~v~~g------~-------~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~ 130 (361)
T 1mpp_A 67 SSSTFKETDYNLNIT--YGTGGAN-GIYFRDSITVG------G-------ATVKQQTLAYVDNVSGPTAEQSPDSELFLD 130 (361)
T ss_dssp GCTTCEEEEEEEEEE--CSSCEEE-EEEEEEEEEET------T-------EEEEEEEEEEEEEEESGGGSSCTTCSSCCC
T ss_pred cCCceEecCCeEEEE--ECCceEE-EEEEEEEEEEC------C-------EEEeceEEEEEEeccCccccccccccCCCC
Confidence 355666778999999 8888876 99999999994 3 4788999999987633 1 1234689
Q ss_pred eEEeeCCCCC------------chhhhhhhccCC-CCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCC
Q 038219 184 GMAGLGRTQV------------SLPSQFSAAFNF-DRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVH 250 (435)
Q Consensus 184 GIlGLg~~~~------------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~ 250 (435)
||||||++.+ +++.+|.+++.| +++||+||.+. ...|.|+|||+|+ .++.|++.|+|++....
T Consensus 131 GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~--~~~~g~l~~~p~~~~~~- 206 (361)
T 1mpp_A 131 GIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNN--TLLGGDIQYTDVLKSRG- 206 (361)
T ss_dssp EEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCG--GGBSSCCEEEECEEETT-
T ss_pred CEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCCh--hhcCCceEEEEcccCCC-
Confidence 9999998754 456689999888 57899999986 5589999999997 68889999999986531
Q ss_pred CCCcccCCCCCcceEEEEeEEEECCEEeecCcccccccccCCCCeE-EecCcceeeeCHHHHHHHHHHHHHHhhcCCCCC
Q 038219 251 NEGLAFKGDPSTDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTK-VSTADPYTVLETSIYKAFIETFSKALLFNIPRV 329 (435)
Q Consensus 251 ~~~~~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~i-iDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~ 329 (435)
...+|.|.+++|+|+++.+.... ...+| |||||++++||+++|++|.+++.+... ..
T Consensus 207 ---------~~~~~~v~l~~i~v~~~~~~~~~---------~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~----~~ 264 (361)
T 1mpp_A 207 ---------GYFFWDAPVTGVKIDGSDAVSFD---------GAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT----ES 264 (361)
T ss_dssp ---------EEEEEEEEEEEEEETTEEEEEEE---------EEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE----EE
T ss_pred ---------ceeEEEEEEeEEEECCeeeccCC---------CCEEEEECCCCCceeCCHHHHHHHHHHhCCccc----CC
Confidence 12389999999999998764321 25699 999999999999999999998854321 11
Q ss_pred CCCCCcccceeccCCCCccc-CeEEEEE--cC---CceEEEEcCCccEEEeC-CceEEE-EEEeCCCCCCCeeeechhhh
Q 038219 330 KPIAPFGACFNSSFIGGTTA-PEIHLVL--PG---NNRVWKIYGANSMVRVG-KDAMCL-AFVDGGVNPRTSVVIGGYQL 401 (435)
Q Consensus 330 ~~~~~~~~C~~~~~~~~~~~-P~i~~~f--~g---~~~~~~ip~~~y~~~~~-~~~~C~-~~~~~~~~~~~~~ILG~~fl 401 (435)
.. .....|+... .+ |+|+|+| ++ ++++|+||+++|+++.. ++..|+ ++.... .+.||||+.||
T Consensus 265 ~g-~~~~~C~~~~-----~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~---~~~~iLG~~fl 335 (361)
T 1mpp_A 265 QQ-GYTVPCSKYQ-----DSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG---GNQFIVGNLFL 335 (361)
T ss_dssp TT-EEEEEHHHHT-----TCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES---SSCCEEEHHHH
T ss_pred CC-cEEEECCCcc-----cCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC---CCCEEEChHHh
Confidence 11 1234687643 56 9999999 61 14899999999999875 346898 666542 35799999999
Q ss_pred cccEEEEeCCCCEEEEeec
Q 038219 402 EDNLLEFNLAKSRLGFSSS 420 (435)
Q Consensus 402 r~~yvvfD~~~~rIGfa~~ 420 (435)
|++|+|||++++|||||+.
T Consensus 336 ~~~yvvfD~~~~~igfa~~ 354 (361)
T 1mpp_A 336 RFFVNVYDFGKNRIGFAPL 354 (361)
T ss_dssp TTEEEEEETTTTEEEEEEB
T ss_pred ccEEEEEECCCCEEEEEEc
Confidence 9999999999999999973
No 11
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.8e-54 Score=424.32 Aligned_cols=312 Identities=16% Similarity=0.240 Sum_probs=247.7
Q ss_pred eEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCC
Q 038219 34 LALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPG 113 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~ 113 (435)
..+||.. ..+.+|+++|+||||||+++|+|||||+++||+|..| .+..|..+..|++. .+++
T Consensus 3 ~~~~l~~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~------~SsT 64 (329)
T 1dpj_A 3 HDVPLTN-YLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNEC-----------GSLACFLHSKYDHE------ASSS 64 (329)
T ss_dssp EEEECEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG------GCTT
T ss_pred cceeeee-cCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCC-----------CCcccCCcCcCCcc------cCcC
Confidence 4678886 3578999999999999999999999999999999765 44567666666653 3556
Q ss_pred CCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcC-CCCCCCcceEEeeCCCC
Q 038219 114 CNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLL-DGLATGVKGMAGLGRTQ 192 (435)
Q Consensus 114 c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~-~~~~~~~~GIlGLg~~~ 192 (435)
+....|.|.+. |++|++. |.+++|+|+|+ + +.++++.|||++.... .......+||||||++.
T Consensus 65 ~~~~~~~~~i~--Yg~Gs~~-G~~~~D~v~ig------~-------~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~ 128 (329)
T 1dpj_A 65 YKANGTEFAIQ--YGTGSLE-GYISQDTLSIG------D-------LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDT 128 (329)
T ss_dssp CEEEEEEEEEE--ETTEEEE-EEEEEEEEEET------T-------EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGG
T ss_pred eEECCcEEEEE--ECCceEE-EEEEEEEEEEC------C-------eEECCeEEEEEEecCccccccCCcceEEEeCCch
Confidence 66778999999 8888877 99999999994 3 4788999999987532 11234679999999987
Q ss_pred Cc------hhhhhhhccCC-CCceEEecCCCC---CCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCc
Q 038219 193 VS------LPSQFSAAFNF-DRKFSICLSSST---TSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPST 262 (435)
Q Consensus 193 ~s------~~~ql~~~~~i-~~~FS~~L~~~~---~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~ 262 (435)
.+ +..+|.+++.+ +++||+||.+.. ...|.|+|||+|+ .++.|++.|+|+.. +.
T Consensus 129 ~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~ 192 (329)
T 1dpj_A 129 ISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDE--SKFKGDITWLPVRR--------------KA 192 (329)
T ss_dssp GCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCG--GGEEEEEEEEECSS--------------BT
T ss_pred hhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCCh--hhcCCceEEEEcCC--------------Cc
Confidence 65 34678888888 578999998752 2479999999997 67889999999974 36
Q ss_pred ceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceecc
Q 038219 263 DYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSS 342 (435)
Q Consensus 263 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~ 342 (435)
+|.|.+++|+|+++.+... +..+||||||++++||+++|++|.+++.+.. .. ..||..+
T Consensus 193 ~~~v~l~~i~v~~~~~~~~----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~-------~~----~g~~~~~ 251 (329)
T 1dpj_A 193 YWEVKFEGIGLGDEYAELE----------SHGAAIDTGTSLITLPSGLAEMINAEIGAKK-------GW----TGQYTLD 251 (329)
T ss_dssp TBEEEEEEEEETTEEEECS----------SCEEEECTTCSCEEECHHHHHHHHHHHTCEE-------CT----TSSEEEC
T ss_pred eEEEEeeeEEECCeEecCC----------CccEEeeCCCCcEECCHHHHHHHHHHhCCcc-------CC----CCeEEEE
Confidence 8999999999999877532 3679999999999999999999998874321 01 1133333
Q ss_pred CCCCcccCeEEEEEcCCceEEEEcCCccEEEeCCceEEE-EEEeCCC--CCCCeeeechhhhcccEEEEeCCCCEEEEee
Q 038219 343 FIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCL-AFVDGGV--NPRTSVVIGGYQLEDNLLEFNLAKSRLGFSS 419 (435)
Q Consensus 343 ~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~ 419 (435)
|.....+|+|+|+|+| .+|+||+++|+++.. ..|+ ++...+. ...+.||||+.|||++|+|||++++|||||+
T Consensus 252 C~~~~~~P~i~f~f~g--~~~~i~~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~ 327 (329)
T 1dpj_A 252 CNTRDNLPDLIFNFNG--YNFTIGPYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAK 327 (329)
T ss_dssp GGGGGGCCCEEEEETT--EEEEECTTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred CCCCCcCCcEEEEECC--EEEEECHHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEE
Confidence 3322378999999987 899999999999864 5798 5665421 1246899999999999999999999999997
Q ss_pred c
Q 038219 420 S 420 (435)
Q Consensus 420 ~ 420 (435)
.
T Consensus 328 ~ 328 (329)
T 1dpj_A 328 A 328 (329)
T ss_dssp E
T ss_pred C
Confidence 3
No 12
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.8e-54 Score=423.36 Aligned_cols=309 Identities=14% Similarity=0.154 Sum_probs=241.9
Q ss_pred EeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCCC
Q 038219 36 LLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGCN 115 (435)
Q Consensus 36 ~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c~ 115 (435)
+++..+..+.+|+++|+||||+|++.|+|||||+++||+|.+|. .| |..+..|++. .++++.
T Consensus 6 v~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--------~c----~~~~~~y~~~------~SsT~~ 67 (325)
T 2apr_A 6 VPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCT--------NC----GSGQTKYDPN------QSSTYQ 67 (325)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCS--------SC----CTTSCCBCGG------GCTTCE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCc--------hH----hcCCCCCCcc------cCCCee
Confidence 44444557899999999999999999999999999999998872 23 4444555542 345556
Q ss_pred CCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCCCCCcceEEeeCCCCC--
Q 038219 116 NHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGLATGVKGMAGLGRTQV-- 193 (435)
Q Consensus 116 ~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~~~~-- 193 (435)
...|.|.+. |++|+...|.+++|+|+|+ + +.++++.|||++...........+||||||+...
T Consensus 68 ~~~~~~~i~--Yg~Gs~~~G~~~~D~v~~g------~-------~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~ 132 (325)
T 2apr_A 68 ADGRTWSIS--YGDGSSASGILAKDNVNLG------G-------LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITT 132 (325)
T ss_dssp EEEEEEEEE--CTTSCEEEEEEEEEEEEET------T-------EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCS
T ss_pred eCCCEEEEE--ECCCCCEEEEEEEEEEEEC------C-------EEECcEEEEEEeccCcccccCCCceEEEeCCccccc
Confidence 678999999 8888744499999999994 3 4788999999987532211234899999998754
Q ss_pred -----chhhhhhhccCC-CCceEEecCCC-CCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcceEE
Q 038219 194 -----SLPSQFSAAFNF-DRKFSICLSSS-TTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDYFI 266 (435)
Q Consensus 194 -----s~~~ql~~~~~i-~~~FS~~L~~~-~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y~v 266 (435)
+++.+|.+++.+ +++||+||.+. ....|.|+|||+|+ .++.|++.|+|+... ..+|.|
T Consensus 133 ~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~~~~v 197 (325)
T 2apr_A 133 VRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDS--TKFKGSLTTVPIDNS-------------RGWWGI 197 (325)
T ss_dssp STTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCG--GGBCSCCEEEECBCT-------------TSSCEE
T ss_pred ccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCc--hhccCceEEEEccCC-------------CCEEEE
Confidence 467899999988 57899999763 24689999999997 788999999999743 468999
Q ss_pred EEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceeccCCCC
Q 038219 267 EIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSSFIGG 346 (435)
Q Consensus 267 ~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 346 (435)
.+++|+|++. +.. ....+||||||++++||+++|+++++++.+.+. .. ......|+.
T Consensus 198 ~l~~i~vg~~-~~~----------~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~----~~--g~~~~~C~~------ 254 (325)
T 2apr_A 198 TVDRATVGTS-TVA----------SSFDGILDTGTTLLILPNNIAASVARAYGASDN----GD--GTYTISCDT------ 254 (325)
T ss_dssp EECEEEETTE-EEE----------CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEEC----SS--SCEEECSCG------
T ss_pred EEeEEEECCE-ecC----------CCceEEEecCCccEECCHHHHHHHHHHHhcccC----CC--CeEEEECCC------
Confidence 9999999993 321 135799999999999999999999999865432 11 112235763
Q ss_pred cccCeEEEEEcCCceEEEEcCCccEEEeCCceEEEEEEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEeec
Q 038219 347 TTAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCLAFVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFSSS 420 (435)
Q Consensus 347 ~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~~ 420 (435)
..+|+|+|+|+| .+++||+++|++... +..|++.+.... .+.||||+.|||++|+|||++++|||||+.
T Consensus 255 ~~~p~i~f~f~g--~~~~ip~~~~~~~~~-~~~C~~~i~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 323 (325)
T 2apr_A 255 SAFKPLVFSING--ASFQVSPDSLVFEEF-QGQCIAGFGYGN--WGFAIIGDTFLKNNYVVFNQGVPEVQIAPV 323 (325)
T ss_dssp GGCCCEEEEETT--EEEEECGGGGEEEEE-TTEEEESEEEES--SSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CCCCcEEEEECC--EEEEECHHHEEEcCC-CCeEEEEEEcCC--CCCEEECHHHhcceEEEEECCCCEEEEEec
Confidence 148999999998 499999999998654 568997543222 347999999999999999999999999984
No 13
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.5e-54 Score=427.13 Aligned_cols=312 Identities=18% Similarity=0.235 Sum_probs=245.6
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCC--CCCCCCCcccccCCcccccccccCCCcccCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCD--QGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSP 110 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~--~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~ 110 (435)
++.+||.+ .+.+|+++|.||||+|++.|+|||||+++||+|. +|..... ...+..|..+..|++. .
T Consensus 2 ~v~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~----~~~~~~C~~~~~y~~~------~ 69 (342)
T 2qzx_A 2 PVAVTLHN--EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWR----GDKGDFCKSAGSYSPA------S 69 (342)
T ss_dssp CEEEEEEE--CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSS----SCCTTGGGTTCCBCGG------G
T ss_pred ceeEEEec--CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccc----cCccccccCCCcCCcc------c
Confidence 57889998 6789999999999999999999999999999865 4421000 0013467666556553 3
Q ss_pred CCCCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCCCCCcceEEeeCC
Q 038219 111 GPGCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGLATGVKGMAGLGR 190 (435)
Q Consensus 111 ~~~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~ 190 (435)
++++....|.|.+. |++|+...|.+++|+|+|+ + +.++++.|||++.. ...+||||||+
T Consensus 70 SsT~~~~~~~~~i~--Yg~Gs~~~G~~~~D~v~~g------~-------~~v~~~~fg~~~~~------~~~~GilGLg~ 128 (342)
T 2qzx_A 70 SRTSQNLNTRFDIK--YGDGSYAKGKLYKDTVGIG------G-------VSVRDQLFANVWST------SARKGILGIGF 128 (342)
T ss_dssp CTTCEEEEEEEEEE--CTTSCEEEEEEEEEEEEET------T-------EEEEEEEEEEEEEE------CSSSCEEECSC
T ss_pred CCCcccCCCcEEEE--eCCCCeEEEEEEEEEEEEC------C-------EEecceEEEEEEec------CCCcCEEEEcc
Confidence 45566678999999 8888754499999999994 3 47889999999875 14799999999
Q ss_pred CCC--------chhhhhhhccCC-CCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCC
Q 038219 191 TQV--------SLPSQFSAAFNF-DRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPS 261 (435)
Q Consensus 191 ~~~--------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~ 261 (435)
... +++.+|.+++.| +++||+||.+.....|.|+|||+|+ .++.|++.|+|++.+
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------- 192 (342)
T 2qzx_A 129 QSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDK--AKYSGSLVDLPITSE-------------- 192 (342)
T ss_dssp GGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEET--TSBSSCCEEEECCCS--------------
T ss_pred ccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccch--hhEecceEEEeccCC--------------
Confidence 754 788999999988 4789999998645689999999997 688999999999753
Q ss_pred cceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceec
Q 038219 262 TDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNS 341 (435)
Q Consensus 262 ~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~ 341 (435)
.+|.|.+++|+|+++.+..+ ..+||||||++++||+++|++|.+++.+... +.+.........|+
T Consensus 193 ~~~~v~l~~i~v~g~~~~~~-----------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~--~~~~~~~~~~~~C~-- 257 (342)
T 2qzx_A 193 KKLTVGLRSVNVRGRNVDAN-----------TNVLLDSGTTISYFTRSIVRNILYAIGAQMK--FDSAGNKVYVADCK-- 257 (342)
T ss_dssp SSCEEEEEEEEETTEEEEEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE--ECTTSCEEEEECTT--
T ss_pred ceEEEEEeEEEECCEecCCC-----------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeee--eccCCCcEEEEECC--
Confidence 58999999999999877532 4699999999999999999999999865432 11111101123453
Q ss_pred cCCCCcccCeEEEEEcCCceEEEEcCCccEEEeC-----CceEEEEEEeCCCCCCCeeeechhhhcccEEEEeCCCCEEE
Q 038219 342 SFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVG-----KDAMCLAFVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLG 416 (435)
Q Consensus 342 ~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~-----~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIG 416 (435)
.+|.|+|+|.+ +++|+||+++|+++.. .+..|+..+... +.||||+.|||++|+|||++++|||
T Consensus 258 ------~~p~i~f~f~~-g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~ig 326 (342)
T 2qzx_A 258 ------TSGTIDFQFGN-NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES----EDNILGDNFLRSAYVVYNLDDKKIS 326 (342)
T ss_dssp ------CCCEEEEEETT-TEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC----SSCEECHHHHTTEEEEEETTTTEEE
T ss_pred ------CCCcEEEEECC-CcEEEEcHHHhcccccccCCCCCCccEEEEecC----CCcEeChHhhhcEEEEEECCCCEEE
Confidence 37999999975 5999999999998742 235798654433 2589999999999999999999999
Q ss_pred Eee
Q 038219 417 FSS 419 (435)
Q Consensus 417 fa~ 419 (435)
||+
T Consensus 327 fA~ 329 (342)
T 2qzx_A 327 MAP 329 (342)
T ss_dssp EEE
T ss_pred EEe
Confidence 997
No 14
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.1e-54 Score=425.83 Aligned_cols=311 Identities=17% Similarity=0.225 Sum_probs=248.3
Q ss_pred EeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCCC
Q 038219 36 LLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGCN 115 (435)
Q Consensus 36 ~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c~ 115 (435)
+||+ ..+.+|+++|.||||||+++|+|||||+++||+|..| .+..|..+..|++. .++++.
T Consensus 5 ~~l~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~------~SsT~~ 65 (329)
T 1htr_B 5 EPMA--YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYC-----------QSQACTSHSRFNPS------ESSTYS 65 (329)
T ss_dssp CGGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG------GCTTCE
T ss_pred eeeE--EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCC-----------CCcccCCCCcCCCc------cCCCeE
Confidence 5676 4678999999999999999999999999999999765 44567666666653 355666
Q ss_pred CCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCC-CCCcceEEeeCCCCCc
Q 038219 116 NHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGL-ATGVKGMAGLGRTQVS 194 (435)
Q Consensus 116 ~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~-~~~~~GIlGLg~~~~s 194 (435)
...|.|.+. |++|++. |.+++|+|+|+ + +.++++.|||++......+ ....+||||||++..+
T Consensus 66 ~~~~~~~i~--Yg~gs~~-G~~~~D~v~~g------~-------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 129 (329)
T 1htr_B 66 TNGQTFSLQ--YGSGSLT-GFFGYDTLTVQ------S-------IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALS 129 (329)
T ss_dssp EEEEEEEEE--ETTEEEE-EEEEEEEEEET------T-------EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCC
T ss_pred ECCcEEEEE--eCCCCeE-EEEEeeeEEEc------c-------eEECceEEEEEEEccccccccCCCceEEecCCCccc
Confidence 778999999 8998886 99999999994 3 4788999999987632211 2468999999997654
Q ss_pred ------hhhhhhhccCC-CCceEEecCCCCCC-CceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcceEE
Q 038219 195 ------LPSQFSAAFNF-DRKFSICLSSSTTS-NGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDYFI 266 (435)
Q Consensus 195 ------~~~ql~~~~~i-~~~FS~~L~~~~~~-~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y~v 266 (435)
++.+|.+++.+ +++||+||.+.... .|.|+|||+|+ .++.|++.|+|+.. ..+|.|
T Consensus 130 ~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~~v 193 (329)
T 1htr_B 130 VDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDS--SLYTGQIYWAPVTQ--------------ELYWQI 193 (329)
T ss_dssp CTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCG--GGEEEEEEEEEBCS--------------SSSCEE
T ss_pred ccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCH--HHcCCceEEEECCC--------------CceEEE
Confidence 67789999888 57899999986433 79999999997 67889999999974 368999
Q ss_pred EEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceeccCCCC
Q 038219 267 EIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSSFIGG 346 (435)
Q Consensus 267 ~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 346 (435)
.+++|+|+++.+... .....+||||||++++||+++|++|.+++.+... ........|+...
T Consensus 194 ~l~~i~v~~~~~~~~--------~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~------~~g~~~~~C~~~~---- 255 (329)
T 1htr_B 194 GIEEFLIGGQASGWC--------SEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED------EYGQFLVNCNSIQ---- 255 (329)
T ss_dssp EECEEEETTEECCTT--------TTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC------TTSCEEECGGGGG----
T ss_pred EEeEEEECCceeeec--------CCCceEEEecCCccEECCHHHHHHHHHHhCCeec------CCCeEEEeCCCcc----
Confidence 999999999875411 1135799999999999999999999988753321 1111234687543
Q ss_pred cccCeEEEEEcCCceEEEEcCCccEEEeCCceEEE-EEEeCCC--CCCC-eeeechhhhcccEEEEeCCCCEEEEeec
Q 038219 347 TTAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCL-AFVDGGV--NPRT-SVVIGGYQLEDNLLEFNLAKSRLGFSSS 420 (435)
Q Consensus 347 ~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~-~~~~~~~--~~~~-~~ILG~~flr~~yvvfD~~~~rIGfa~~ 420 (435)
.+|+|+|+|+| ++|+||+++|+++.. + .|+ ++...+. ..++ .||||+.|||++|+|||++++|||||++
T Consensus 256 -~~P~i~f~f~g--~~~~i~~~~y~~~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~ 328 (329)
T 1htr_B 256 -NLPSLTFIING--VEFPLPPSSYILSNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATA 328 (329)
T ss_dssp -GSCCEEEEETT--EEEEECHHHHEEECS-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred -cCCcEEEEECC--EEEEECHHHhcccCC-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeC
Confidence 68999999976 999999999999876 4 898 5665431 1234 8999999999999999999999999973
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.2e-54 Score=423.91 Aligned_cols=308 Identities=16% Similarity=0.164 Sum_probs=244.8
Q ss_pred EeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCCC
Q 038219 36 LLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGCN 115 (435)
Q Consensus 36 ~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c~ 115 (435)
.||.+ ..+.+|+++|+||||||+++|+|||||+++||+|..| .+..|..+..|++. .++++.
T Consensus 3 ~~l~n-~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C-----------~~~~C~~~~~y~~~------~SsT~~ 64 (320)
T 4aa9_A 3 EPLTS-YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYC-----------KSNVCKNHHRFDPR------KSSTFR 64 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG------GCTTCE
T ss_pred cccee-ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCC-----------CccccCCCCCCCCC------CCcCeE
Confidence 46665 4578999999999999999999999999999999765 45577766666653 355566
Q ss_pred CCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCC-CCCCCcceEEeeCCCCC-
Q 038219 116 NHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLD-GLATGVKGMAGLGRTQV- 193 (435)
Q Consensus 116 ~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~- 193 (435)
...|.|.+. |++|++. |.+++|+|+|+ + +.++++.|||++..... ......+||||||++..
T Consensus 65 ~~~~~~~i~--Yg~gs~~-G~~~~D~v~ig------~-------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 128 (320)
T 4aa9_A 65 NLGKPLSIH--YGTGSME-GFLGYDTVTVS------N-------IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLA 128 (320)
T ss_dssp EEEEEEEEE--ETTEEEE-EEEEEEEEEET------T-------EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGS
T ss_pred cCCcEEEEE--ECCcEEE-EEEEEEEEEEC------C-------EeecCeEEEEEEEcccccccccCcccEEecCccccc
Confidence 778999999 8999877 99999999994 3 47889999999876321 11235799999998653
Q ss_pred -----chhhhhhhccCC-CCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcceEEE
Q 038219 194 -----SLPSQFSAAFNF-DRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDYFIE 267 (435)
Q Consensus 194 -----s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y~v~ 267 (435)
++..+|.+++.| +++||+||.+. ...|.|+|||+|+ .++.|++.|+|+.. ..+|.|.
T Consensus 129 ~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~w~v~ 191 (320)
T 4aa9_A 129 SEYSVPVFDNMMDRHLVARDLFSVYMDRN-GQGSMLTLGAIDP--SYYTGSLHWVPVTL--------------QQYWQFT 191 (320)
T ss_dssp CTTCCCHHHHHHHTTCSSSSEEEEECCSS-SSCCEEEETCCCG--GGEEEEEEEEECSS--------------BTTBEEE
T ss_pred ccCCCCHHHHHHhCCCCCCceEEEEeCCC-CCCeEEEEcccCH--HHccCceEEEEccc--------------CCceEEE
Confidence 477889999988 57899999986 5689999999997 77889999999974 4689999
Q ss_pred EeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceeccCCCCc
Q 038219 268 IKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSSFIGGT 347 (435)
Q Consensus 268 l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 347 (435)
+++|+|+++.+..+. ...+||||||++++||+++|++|.+++.+... ........|....
T Consensus 192 l~~i~v~~~~~~~~~---------~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~------~~g~~~~~C~~~~----- 251 (320)
T 4aa9_A 192 VDSVTINGVAVACVG---------GCQAILDTGTSVLFGPSSDILKIQMAIGATEN------RYGEFDVNCGNLR----- 251 (320)
T ss_dssp ECEEEETTEEEESTT---------CEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC------TTSCEEECGGGGG-----
T ss_pred EeEEEECCEEeccCC---------CcEEEEECCCCcEECCHHHHHHHHHHhCCccc------CCCcEEEeCCCCC-----
Confidence 999999998776431 35799999999999999999999888743211 1111233566543
Q ss_pred ccCeEEEEEcCCceEEEEcCCccEEEeCCceEEEE-EEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEeec
Q 038219 348 TAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCLA-FVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFSSS 420 (435)
Q Consensus 348 ~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~~ 420 (435)
.+|+|+|+|+| ++++||+++|+... +..|+. +..... ++.||||+.|||++|+|||++++|||||++
T Consensus 252 ~~p~i~f~f~g--~~~~l~~~~y~~~~--~~~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~a 319 (320)
T 4aa9_A 252 SMPTVVFEING--RDYPLSPSAYTSKD--QGFCTSGFQGDNN--SELWILGDVFIREYYSVFDRANNRVGLAKA 319 (320)
T ss_dssp GCCCEEEEETT--EEEEECHHHHEEEE--TTEEEESEEEETT--CCCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cCceEEEEECC--EEEEECHHHhccCC--CCeEEEEEEcCCC--CCcEEEChHHhcceEEEEECCCCEEEEEec
Confidence 68999999987 99999999999763 467985 665332 357999999999999999999999999974
No 16
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=5.4e-54 Score=422.97 Aligned_cols=318 Identities=16% Similarity=0.252 Sum_probs=252.7
Q ss_pred CcceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCC
Q 038219 31 PKALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSP 110 (435)
Q Consensus 31 ~~~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~ 110 (435)
.+...+||.. ..+.+|+++|.||||||+++|+|||||+++||+|..|.. | +..|..+..|++. .
T Consensus 5 ~~~~~~~l~n-~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~--------~-~~~C~~~~~y~~~------~ 68 (341)
T 3k1w_A 5 NTTSSVILTN-YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSR--------L-YTACVYHKLFDAS------D 68 (341)
T ss_dssp CBCEEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCT--------T-CHHHHTSCCBCGG------G
T ss_pred CCCccccceE-ccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCC--------C-CCcccCCCCCCCC------c
Confidence 4567899997 357899999999999999999999999999999987621 1 3467666666653 3
Q ss_pred CCCCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCC-CCCCCcceEEeeC
Q 038219 111 GPGCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLD-GLATGVKGMAGLG 189 (435)
Q Consensus 111 ~~~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg 189 (435)
++++....|.|.+. |++|++. |.+++|+|+|+ + +.+ ++.|||++..... ......+||||||
T Consensus 69 SsT~~~~~~~~~i~--Yg~gs~~-G~~~~D~v~ig------~-------~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg 131 (341)
T 3k1w_A 69 SSSYKHNGTELTLR--YSTGTVS-GFLSQDIITVG------G-------ITV-TQMFGEVTEMPALPFMLAEFDGVVGMG 131 (341)
T ss_dssp CTTCEEEEEEEEEE--ETTEEEE-EEEEEEEEEET------T-------EEE-EEEEEEEEECCHHHHTTCSSSEEEECS
T ss_pred CcCeeECCCEEEEE--ECCcEEE-EEEEEEEEEEC------C-------cee-eEEEEEEEEccccccccCCcceEEECC
Confidence 55566778999999 8888877 99999999994 3 477 9999999876321 2234579999999
Q ss_pred CCCCc------hhhhhhhccCC-CCceEEecCCCC----CCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCC
Q 038219 190 RTQVS------LPSQFSAAFNF-DRKFSICLSSST----TSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKG 258 (435)
Q Consensus 190 ~~~~s------~~~ql~~~~~i-~~~FS~~L~~~~----~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~ 258 (435)
++..+ ++.+|.+++.| +++||+||.+.. ...|.|+|||+|+ .++.|++.|+|+..
T Consensus 132 ~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~------------ 197 (341)
T 3k1w_A 132 FIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDP--QHYEGNFHYINLIK------------ 197 (341)
T ss_dssp CGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCG--GGEEEEEEEEECSS------------
T ss_pred chhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccCh--HHccCceEEEecCC------------
Confidence 97654 67889999888 478999999863 3489999999997 77889999999974
Q ss_pred CCCcceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccc
Q 038219 259 DPSTDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGAC 338 (435)
Q Consensus 259 ~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C 338 (435)
..+|.|.+++|+|+++.+.... ...+||||||++++||+++|++|.+++.+... ..+ ....|
T Consensus 198 --~~~w~v~l~~i~v~~~~~~~~~---------~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----~~g--~~~~C 259 (341)
T 3k1w_A 198 --TGVWQIQMKGVSVGSSTLLCED---------GCLALVDTGASYISGSTSSIEKLMEALGAKKR-----LFD--YVVKC 259 (341)
T ss_dssp --TTSCEEEECCEEETTEEEECTT---------CEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----SSC--EEEEG
T ss_pred --CCEEEEEEeEEEECCEEeecCC---------CCEEEEECCCChhcCCHHHHHHHHHHcCCeec-----CCC--eEEeC
Confidence 4789999999999998754321 35799999999999999999999988853321 111 23356
Q ss_pred eeccCCCCcccCeEEEEEcCCceEEEEcCCccEEEeCC--ceEEE-EEEeCCC--CCCCeeeechhhhcccEEEEeCCCC
Q 038219 339 FNSSFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGK--DAMCL-AFVDGGV--NPRTSVVIGGYQLEDNLLEFNLAKS 413 (435)
Q Consensus 339 ~~~~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvfD~~~~ 413 (435)
... ..+|+|+|+|+| ++++||+++|+++... +..|+ ++...+. .....||||+.|||++|+|||++++
T Consensus 260 ~~~-----~~~p~i~f~f~g--~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ 332 (341)
T 3k1w_A 260 NEG-----PTLPDISFHLGG--KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNN 332 (341)
T ss_dssp GGG-----GGCCCEEEEETT--EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTT
T ss_pred CCC-----CcCCcEEEEECC--EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCC
Confidence 543 268999999987 9999999999987542 57899 4665321 1245799999999999999999999
Q ss_pred EEEEeec
Q 038219 414 RLGFSSS 420 (435)
Q Consensus 414 rIGfa~~ 420 (435)
|||||++
T Consensus 333 ~igfA~a 339 (341)
T 3k1w_A 333 RIGFALA 339 (341)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 9999984
No 17
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.8e-53 Score=417.61 Aligned_cols=311 Identities=17% Similarity=0.282 Sum_probs=246.1
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCc-ccccccccCCCcccCCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGS-AQCKLARSKSCIDEYSCSPG 111 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~-~~C~~~~~~~~~~~~~~~~~ 111 (435)
.+.+||.+ ++.+|+++|.||||||++.|+|||||+++||++.. ..|.. ..|..+..|+.. .+
T Consensus 2 ~i~~~l~~--~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~---------~~C~~~~~C~~~~~y~~~------~S 64 (339)
T 3fv3_A 2 SISLSLIN--EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSN---------AQCGKGVDCKSSGTFTPS------SS 64 (339)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEE---------EEECTTCCTTTTCCBCGG------GC
T ss_pred ceeeEEEc--CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCC---------CCCCCCCCCCCCCcCCCc------cC
Confidence 47899998 56899999999999999999999999999998542 01221 246555555542 34
Q ss_pred CCCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCCCCCcceEEeeCCC
Q 038219 112 PGCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGLATGVKGMAGLGRT 191 (435)
Q Consensus 112 ~~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~~ 191 (435)
+++....|.|.+. |++|+...|.+++|+|+|+ + +.++++.|||++... ..+||||||++
T Consensus 65 sT~~~~~~~~~i~--Yg~gs~~~G~~~~D~v~~g------~-------~~v~~~~fg~~~~~~------~~~GilGLg~~ 123 (339)
T 3fv3_A 65 SSYKNLGAAFTIR--YGDGSTSQGTWGKDTVTIN------G-------VSITGQQIADVTQTS------VDQGILGIGYT 123 (339)
T ss_dssp TTCEEEEEEEEEE--CTTSCEEEEEEEEEEEEET------T-------EEEEEEEEEEEEEES------SSSCEEECSCG
T ss_pred cceeeCCceEEEE--ECCCceEEEEEEEEEEEEC------C-------EEECceEEEEEEecC------CCceeEEecCc
Confidence 5556678999999 8888444499999999994 3 478899999998762 26999999987
Q ss_pred CCc----------------hhhhhhhccCCC-CceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCc
Q 038219 192 QVS----------------LPSQFSAAFNFD-RKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGL 254 (435)
Q Consensus 192 ~~s----------------~~~ql~~~~~i~-~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~ 254 (435)
..+ ++.||.+++.|+ ++||+||.+.....|.|+|||+|+ .++.|++.|+|+...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~------- 194 (339)
T 3fv3_A 124 SNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDN--AKYSGKLVAEQVTSS------- 194 (339)
T ss_dssp GGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEET--TSBSSCCEEEEBCCS-------
T ss_pred cccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeech--HHeecceEEEecccC-------
Confidence 543 788999999995 789999998755689999999997 788999999999753
Q ss_pred ccCCCCCcceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038219 255 AFKGDPSTDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAP 334 (435)
Q Consensus 255 ~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~ 334 (435)
.+|.|.+++|.|+++.+... ..+||||||++++||+++|++|.+++.+... .... .....
T Consensus 195 -------~~~~v~l~~i~v~g~~~~~~-----------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~-~~~~-~~~~~ 254 (339)
T 3fv3_A 195 -------QALTISLASVNLKGSSFSFG-----------DGALLDSGTTLTYFPSDFAAQLADKAGARLV-QVAR-DQYLY 254 (339)
T ss_dssp -------SSCEEEEEEEEESSCEEEEE-----------EEEEECTTBSSEEECHHHHHHHHHHHTCEEE-EEET-TEEEE
T ss_pred -------ccEEEEEEEEEECCEeecCC-----------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEc-cccc-cCceE
Confidence 58999999999999877532 4699999999999999999999999874332 0000 11112
Q ss_pred cccceeccCCCCcccCeEEEEEcCCceEEEEcCCccEEEeCCceEEE-EEEeCCCCCCCeeeechhhhcccEEEEeCCCC
Q 038219 335 FGACFNSSFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCL-AFVDGGVNPRTSVVIGGYQLEDNLLEFNLAKS 413 (435)
Q Consensus 335 ~~~C~~~~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~ 413 (435)
...|+. ..+|.|+|+|++ +++++||+++|+++..++ .|+ ++.. . +.||||+.|||++|+|||++++
T Consensus 255 ~~~C~~------~~~p~i~f~f~~-g~~~~v~~~~~~~~~~~~-~C~~~i~~-~----~~~ilG~~fl~~~y~vfD~~~~ 321 (339)
T 3fv3_A 255 FIDCNT------DTSGTTVFNFGN-GAKITVPNTEYVYQNGDG-TCLWGIQP-S----DDTILGDNFLRHAYLLYNLDAN 321 (339)
T ss_dssp EECTTC------CCCSEEEEEETT-SCEEEEEGGGGEEECSSS-CEEESEEE-C----SSCEECHHHHTTEEEEEETTTT
T ss_pred EEecCC------CCCCcEEEEECC-CCEEEECHHHheeeCCCC-eEEEEEEe-C----CcEEeChHHHhCEEEEEECCCC
Confidence 346764 258999999975 499999999999886544 574 6665 2 3699999999999999999999
Q ss_pred EEEEeecCCcccCCcc
Q 038219 414 RLGFSSSLLSWQTTCS 429 (435)
Q Consensus 414 rIGfa~~~~~~~~~C~ 429 (435)
|||||+ +.|+
T Consensus 322 ~igfA~------~~~~ 331 (339)
T 3fv3_A 322 TISIAQ------VKYT 331 (339)
T ss_dssp EEEEEE------BCCC
T ss_pred EEEEEe------cCCC
Confidence 999997 6665
No 18
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.3e-53 Score=418.72 Aligned_cols=313 Identities=16% Similarity=0.250 Sum_probs=243.1
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCC--CCCCCCcccccCCcccccccccCCCcccCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQ--GYVSTSYKPARCGSAQCKLARSKSCIDEYSCSP 110 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~--c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~ 110 (435)
.+.+|+.. .+.+|+++|.||||||+++|+|||||+++||+|.. |..... ......|..+..|++. .
T Consensus 2 ~v~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~----~~~~~~C~~~~~y~~~------~ 69 (342)
T 3pvk_A 2 AVPVTLHN--EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYS----DQTADFCKQKGTYDPS------G 69 (342)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCST----TCCTTGGGTTCCBCGG------G
T ss_pred CcceEEec--CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCccccc----ccccCCCCCCCcCCCc------c
Confidence 36788888 67899999999999999999999999999998653 311000 0023467666666553 3
Q ss_pred CCCCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCCCCCcceEEeeCC
Q 038219 111 GPGCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGLATGVKGMAGLGR 190 (435)
Q Consensus 111 ~~~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~ 190 (435)
++++....|.|.+. |++|+...|.+++|+|+|+ + +.++++.|||++... ..+||||||+
T Consensus 70 SsT~~~~~~~~~i~--Yg~gs~~~G~~~~D~v~ig------~-------~~v~~~~fg~~~~~~------~~~GilGLg~ 128 (342)
T 3pvk_A 70 SSASQDLNTPFKIG--YGDGSSSQGTLYKDTVGFG------G-------VSIKNQVLADVDSTS------IDQGILGVGY 128 (342)
T ss_dssp CTTCEEEEEEEEEE--CSSSCEEEEEEEEEEEEET------T-------EEEEEEEEEEEEEES------SSSCEEECSC
T ss_pred CcceeecCCeEEEE--ecCCCeEEEEEEEEEEEEC------C-------EEecceEEEEEEccC------CCccEEEecC
Confidence 45556678999999 8888743499999999994 3 478899999998762 4799999999
Q ss_pred CC-------CchhhhhhhccCCC-CceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCc
Q 038219 191 TQ-------VSLPSQFSAAFNFD-RKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPST 262 (435)
Q Consensus 191 ~~-------~s~~~ql~~~~~i~-~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~ 262 (435)
+. .+++.+|.+++.|+ ++||+||.+.....|.|+|||+|+ .++.|++.|+|++.. .
T Consensus 129 ~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~--------------~ 192 (342)
T 3pvk_A 129 KTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDN--AKYSGSLIALPVTSD--------------R 192 (342)
T ss_dssp GGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEET--TSBSSCCEEEECCCS--------------S
T ss_pred ccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCc--cceeeeeEEeecCcc--------------c
Confidence 76 46899999999884 789999988655689999999997 788999999999753 5
Q ss_pred ceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceecc
Q 038219 263 DYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSS 342 (435)
Q Consensus 263 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~ 342 (435)
+|.|.+++|.|+++.+... ...+||||||++++||+++|++|.+++..... . .... ..+|..+
T Consensus 193 ~~~v~l~~i~v~g~~~~~~----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~--~---~~~~--~~~~~~~ 255 (342)
T 3pvk_A 193 ELRISLGSVEVSGKTINTD----------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLT--Q---DSNG--NSFYEVD 255 (342)
T ss_dssp SCEEEEEEEEETTEEEEEE----------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEE--E---CTTS--CEEEEEC
T ss_pred eEEEEEeEEEECCEEecCC----------CceEEEeCCCCCeecCHHHHHHHHHHcCCeec--c---cCCC--ceEEEEe
Confidence 8999999999999987643 14699999999999999999999998865432 0 1111 1123333
Q ss_pred CCCCcccCeEEEEEcCCceEEEEcCCccEEEeC--Cc---eEEEEEEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEE
Q 038219 343 FIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVG--KD---AMCLAFVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGF 417 (435)
Q Consensus 343 ~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~--~~---~~C~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGf 417 (435)
|. ..|.|+|+|++ +.+++||+++|+++.. ++ ..|+..+... +.||||+.|||++|+|||++++||||
T Consensus 256 C~---~~p~i~f~f~~-g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~----~~~ilG~~fl~~~y~vfD~~~~~igf 327 (342)
T 3pvk_A 256 CN---LSGDVVFNFSK-NAKISVPASEFAASLQGDDGQPYDKCQLLFDVN----DANILGDNFLRSAYIVYDLDDNEISL 327 (342)
T ss_dssp SC---CCSEEEEEEST-TCEEEEEGGGGEEC----------CEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEE
T ss_pred cC---CCCceEEEECC-CCEEEEcHHHheeeccccCCCcCCeeEEEEeeC----CCeEeCHHHHhcEEEEEECCCCEEEE
Confidence 33 35999999985 4899999999998732 22 5798544332 36899999999999999999999999
Q ss_pred ee
Q 038219 418 SS 419 (435)
Q Consensus 418 a~ 419 (435)
|+
T Consensus 328 A~ 329 (342)
T 3pvk_A 328 AQ 329 (342)
T ss_dssp EE
T ss_pred Ee
Confidence 97
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.8e-54 Score=428.53 Aligned_cols=310 Identities=13% Similarity=0.224 Sum_probs=250.2
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGP 112 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~ 112 (435)
...+||.. ..+.+|+++|.||||||++.|+|||||+++||+|..| .+..|..+..|++. .++
T Consensus 51 ~~~~pl~~-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~------~Ss 112 (375)
T 1miq_A 51 NDVIELDD-VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKC-----------NSSGCSIKNLYDSS------KSK 112 (375)
T ss_dssp TBCCCGGG-TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTC-----------CSSGGGGSCCBCGG------GCT
T ss_pred cceEEccc-CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCC-----------CcccccCCCcCCCc------cCC
Confidence 34578885 4678999999999999999999999999999999765 44567776667663 355
Q ss_pred CCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccC----CcCCCCCCCcceEEee
Q 038219 113 GCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPT----FLLDGLATGVKGMAGL 188 (435)
Q Consensus 113 ~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~----~~~~~~~~~~~GIlGL 188 (435)
++....|.|.+. |++|++. |.+++|+|+|+ + +.+++ .|||++. +. .......+|||||
T Consensus 113 T~~~~~~~~~i~--Yg~Gs~~-G~~~~Dtv~ig------~-------~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGL 174 (375)
T 1miq_A 113 SYEKDGTKVDIT--YGSGTVK-GFFSKDLVTLG------H-------LSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGL 174 (375)
T ss_dssp TCEEEEEEEEEE--ETTEEEE-EEEEEEEEEET------T-------EEEEE-EEEEEEECGGGTT-HHHHSCCCEEEEC
T ss_pred ceEECCcEEEEE--eCCCeEE-EEEEEEEEEEc------C-------ceECc-EEEEEEecccccc-ccccCCCceEEeC
Confidence 666778999999 8988877 99999999994 3 47888 9999987 42 1112467999999
Q ss_pred CCCCC------chhhhhhhccCC-CCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCC
Q 038219 189 GRTQV------SLPSQFSAAFNF-DRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPS 261 (435)
Q Consensus 189 g~~~~------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~ 261 (435)
|++.+ +++.+|.+++.+ +++||+||.+.....|.|+|||+|+ .++.|++.|+|+.. .
T Consensus 175 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~ 238 (375)
T 1miq_A 175 GWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEE--KFYEGNITYEKLNH--------------D 238 (375)
T ss_dssp SSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCG--GGEEEEEEEEEBSS--------------S
T ss_pred CCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCH--HHcCCceEEEecCC--------------C
Confidence 99765 467889999988 5889999998644689999999997 67889999999964 3
Q ss_pred cceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceec
Q 038219 262 TDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNS 341 (435)
Q Consensus 262 ~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~ 341 (435)
.+|.|.++ |+|+++.+ . ...+||||||++++||+++|++|.+++.+.. ....+ .....|+.
T Consensus 239 ~~w~v~l~-i~v~g~~~--~----------~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~~~~g-~~~~~C~~- 299 (375)
T 1miq_A 239 LYWQIDLD-VHFGKQTM--E----------KANVIVDSGTTTITAPSEFLNKFFANLNVIK----VPFLP-FYVTTCDN- 299 (375)
T ss_dssp SSSEEEEE-EEETTEEE--E----------EEEEEECTTBSSEEECHHHHHHHHHHHTCEE----CTTSS-CEEEETTC-
T ss_pred ceEEEEEE-EEECCEEc--c----------cceEEecCCCccEEcCHHHHHHHHHHhCCcc----cCCCC-eEEEECCC-
Confidence 69999999 99999876 1 2569999999999999999999999885432 11111 12346775
Q ss_pred cCCCCcccCeEEEEEcCCceEEEEcCCccEEEeC--CceEEE-EEEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEe
Q 038219 342 SFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVG--KDAMCL-AFVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFS 418 (435)
Q Consensus 342 ~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~--~~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa 418 (435)
..+|+|+|+|+| ++|+||+++|+++.. ++..|+ +++..... .+.||||++|||++|+|||++++|||||
T Consensus 300 -----~~~P~i~f~f~g--~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~riGfA 371 (375)
T 1miq_A 300 -----KEMPTLEFKSAN--NTYTLEPEYYMNPILEVDDTLCMITMLPVDID-SNTFILGDPFMRKYFTVFDYDKESVGFA 371 (375)
T ss_dssp -----TTCCCEEEECSS--CEEEECGGGSEEESSSSSCSEEEESEEECCSS-SSEEEECHHHHHHEEEEEETTTTEEEEE
T ss_pred -----CCCCcEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEECCCC-CCcEEECHHHhccEEEEEECCCCEEEEE
Confidence 268999999976 899999999999875 245898 67765431 2589999999999999999999999999
Q ss_pred ecC
Q 038219 419 SSL 421 (435)
Q Consensus 419 ~~~ 421 (435)
+..
T Consensus 372 ~~~ 374 (375)
T 1miq_A 372 IAK 374 (375)
T ss_dssp EEC
T ss_pred EcC
Confidence 843
No 20
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=5.4e-53 Score=413.64 Aligned_cols=309 Identities=17% Similarity=0.204 Sum_probs=236.8
Q ss_pred EeEe-eCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCC
Q 038219 36 LLVS-KDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGC 114 (435)
Q Consensus 36 ~pl~-~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c 114 (435)
+++. ....+.+|+++|.||||+|++.|+|||||+++||+|..| .+..|..+..|++. .++++
T Consensus 5 v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~~~~~~~y~~~------~SsT~ 67 (329)
T 3c9x_A 5 APNHPSDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSET-----------PKSSATGHAIYTPS------KSSTS 67 (329)
T ss_dssp EEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTS-----------CHHHHTTSCCBCGG------GCTTC
T ss_pred eeeecCCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCC-----------CccccCCCCcCCcc------cCcCc
Confidence 4444 444678999999999999999999999999999999876 22235555555542 34555
Q ss_pred CC-CCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCC-CCCcceEEeeCCCC
Q 038219 115 NN-HTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGL-ATGVKGMAGLGRTQ 192 (435)
Q Consensus 115 ~~-~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~-~~~~~GIlGLg~~~ 192 (435)
.. ..|.|.+. |++|+...|.+++|+|+|+ + +.++++.|||++....... ....+||||||++.
T Consensus 68 ~~~~~~~~~i~--Yg~Gs~~~G~~~~D~v~ig------~-------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~ 132 (329)
T 3c9x_A 68 KKVSGASWSIS--YGDGSSSSGDVYTDKVTIG------G-------FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDS 132 (329)
T ss_dssp EECTTCBEEEE--CTTSCEEEEEEEEEEEEET------T-------EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGG
T ss_pred eEcCCCeEEEE--eCCCCcEEEEEEEEEEEEC------C-------EEEcceEEEEEEecCccccccCCCceeEEeCccc
Confidence 55 57899999 8888843399999999994 3 4788999999987522111 13679999999875
Q ss_pred Cc---------hhhhhhhccCCCCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcc
Q 038219 193 VS---------LPSQFSAAFNFDRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTD 263 (435)
Q Consensus 193 ~s---------~~~ql~~~~~i~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~ 263 (435)
.+ +..+|.++ .-+++||+||.+. ..|.|+|||+|+ .++.|++.|+|++.. ..+
T Consensus 133 ~s~~~~~~~~~~~~~l~~~-i~~~~FS~~l~~~--~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~~ 194 (329)
T 3c9x_A 133 GNQVRPHPQKTWFSNAASS-LAEPLFTADLRHG--QNGSYNFGYIDT--SVAKGPVAYTPVDNS-------------QGF 194 (329)
T ss_dssp GCCCBSSCCCCHHHHHHTT-SSSSEEEEECCSS--SCEEEEESSCCG--GGCSSCEEEEECBCT-------------TSS
T ss_pred ccccCCCCCCCHHHHHHHh-cCCCEEEEEecCC--CCcEEEEeCcCh--hhcccceEEEEccCC-------------Cce
Confidence 44 55677664 2258899999874 589999999997 788999999999743 468
Q ss_pred eEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceeccC
Q 038219 264 YFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSSF 343 (435)
Q Consensus 264 y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~ 343 (435)
|.|.+++|+|+++.+.. ....+||||||++++||+++|++|.+++..... ..... .....|+.
T Consensus 195 ~~v~l~~i~v~~~~~~~----------~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~---~~~~~-~~~~~C~~--- 257 (329)
T 3c9x_A 195 WEFTASGYSVGGGKLNR----------NSIDGIADTGTTLLLLDDNVVDAYYANVQSAQY---DNQQE-GVVFDCDE--- 257 (329)
T ss_dssp CEEEECCEEETTCCCCS----------CCEEEEECTTCCSEEECHHHHHHHHTTCTTCEE---ETTTT-EEEEETTC---
T ss_pred EEEEEeeEEECCEeccC----------CCceEEEECCCCcEeCCHHHHHHHHHhCCCcEE---cCCCC-EEEEECCC---
Confidence 99999999999976531 135799999999999999999998877643211 10011 11235762
Q ss_pred CCCcccCeEEEEEcCCceEEEEcCCccEEEeCC--ceEEEE-EEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEee
Q 038219 344 IGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGK--DAMCLA-FVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFSS 419 (435)
Q Consensus 344 ~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~ 419 (435)
.+|+|+|+|+| ++++||+++|++...+ ...|++ +..... .+.||||+.|||++|+|||++++|||||+
T Consensus 258 ----~~P~i~f~f~g--~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~ILG~~fl~~~y~vfD~~~~riGfA~ 328 (329)
T 3c9x_A 258 ----DLPSFSFGVGS--STITIPGDLLNLTPLEEGSSTCFGGLQSSSG--IGINIFGDVALKAALVVFDLGNERLGWAQ 328 (329)
T ss_dssp ----CCCCEEEEETT--EEEEECGGGGEEEESSTTCSEEEESEEECTT--TTSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred ----CCCcEEEEECC--EEEEECHHHeeeeccCCCCCeEEEEEEcCCC--CCcEEEChHHhccEEEEEECCCCEEeEec
Confidence 68999999987 8999999999987643 368997 554432 35799999999999999999999999997
No 21
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=9.6e-53 Score=411.87 Aligned_cols=307 Identities=17% Similarity=0.179 Sum_probs=234.2
Q ss_pred EeEe-eCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCC
Q 038219 36 LLVS-KDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGC 114 (435)
Q Consensus 36 ~pl~-~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c 114 (435)
+|+. ....+.+|+++|.||||+|++.|+|||||+++||+|.+| .+..| .+..|++. .++++
T Consensus 5 v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~~-~~~~y~~~------~SsT~ 66 (329)
T 1oew_A 5 ATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSET-----------TASEV-XQTIYTPS------KSTTA 66 (329)
T ss_dssp EEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTS-----------CGGGC--CCCBCGG------GCTTC
T ss_pred eEeeecCCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCC-----------Ccccc-ccCccCCc------cCccc
Confidence 4444 444678999999999999999999999999999999876 22234 34445442 34455
Q ss_pred CC-CCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCC-CCCcceEEeeCCCC
Q 038219 115 NN-HTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGL-ATGVKGMAGLGRTQ 192 (435)
Q Consensus 115 ~~-~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~-~~~~~GIlGLg~~~ 192 (435)
.. ..|.|.+. |++|+...|.+++|+|+|+ + +.++++.|||++....... ....+||||||++.
T Consensus 67 ~~~~~~~~~i~--Yg~Gs~~~G~~~~D~v~~g------~-------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~ 131 (329)
T 1oew_A 67 KLLSGATWSIS--YGDGSSSSGDVYTDTVSVG------G-------LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFST 131 (329)
T ss_dssp EEEEEEEEEEE--CTTSCEEEEEEEEEEEEET------T-------EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGG
T ss_pred eecCCCeEEEE--eCCCCcEEEEEEEEEEEEC------C-------EEEeeeEEEEEEecCccccccCCCceEEEecccc
Confidence 55 57899999 8888843399999999994 3 4788999999987522111 13579999999875
Q ss_pred Cc---------hhhhhhhccCC-CCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCc
Q 038219 193 VS---------LPSQFSAAFNF-DRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPST 262 (435)
Q Consensus 193 ~s---------~~~ql~~~~~i-~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~ 262 (435)
++ +..+|.++ + +++||+||.+. ..|.|+|||+|+ .++.|++.|+|++.. +.
T Consensus 132 ~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~--~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~ 192 (329)
T 1oew_A 132 LNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH--APGTYNFGFIDT--TAYTGSITYTAVSTK-------------QG 192 (329)
T ss_dssp GCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS--SCEEEEESCCCT--TSSSSCCEEEECBCT-------------TS
T ss_pred ccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC--CCeEEEEeccCh--HhcccceEEEEccCC-------------Cc
Confidence 44 55677765 5 58899999873 589999999997 688999999999743 47
Q ss_pred ceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceecc
Q 038219 263 DYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSS 342 (435)
Q Consensus 263 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~ 342 (435)
+|.|.+++|+|+++.+.. . ...+||||||++++||+++|++|.+++..... .... ......|+.
T Consensus 193 ~~~v~l~~i~v~~~~~~~--~--------~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~---~~~~-g~~~~~C~~-- 256 (329)
T 1oew_A 193 FWEWTSTGYAVGSGTFKS--T--------SIDGIADTGTTLLYLPATVVSAYWAQVSGAKS---SSSV-GGYVFPCSA-- 256 (329)
T ss_dssp SCEEEEEEEEETTSCCEE--E--------EEEEEECTTCCSEEECHHHHHHHHTTSTTCEE---ETTT-TEEEEETTC--
T ss_pred eEEEEEeeEEECCeeccC--C--------CceEEEeCCCCCEECCHHHHHHHHHhCCCcEE---cCCC-CEEEEECCC--
Confidence 899999999999975531 1 24699999999999999999998887642211 1001 111235762
Q ss_pred CCCCcccCeEEEEEcCCceEEEEcCCccEEEeCC--ceEEEE-EEeCCCCCCCeeeechhhhcccEEEEeC-CCCEEEEe
Q 038219 343 FIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGK--DAMCLA-FVDGGVNPRTSVVIGGYQLEDNLLEFNL-AKSRLGFS 418 (435)
Q Consensus 343 ~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvfD~-~~~rIGfa 418 (435)
.+|+|+|+|+| ++++||+++|++...+ ...|++ +..... .+.||||+.|||++|+|||+ +++|||||
T Consensus 257 -----~~P~i~f~fgg--~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~riGfA 327 (329)
T 1oew_A 257 -----TLPSFTFGVGS--ARIVIPGDYIDFGPISTGSSSCFGGIQSSAG--IGINIFGDVALKAAFVVFNGATTPTLGFA 327 (329)
T ss_dssp -----CCCCEEEEETT--EEEEECHHHHEEEESSTTCSEEEESEEESTT--TSSEEECHHHHTTEEEEEECSSSCEEEEE
T ss_pred -----CCCcEEEEECC--EEEEECHHHeeeeecCCCCCeEEEEEEeCCC--CCceEEChHHhcCEEEEEECCCCceEEEe
Confidence 68999999965 9999999999987632 468997 444432 35799999999999999999 99999999
Q ss_pred e
Q 038219 419 S 419 (435)
Q Consensus 419 ~ 419 (435)
+
T Consensus 328 ~ 328 (329)
T 1oew_A 328 S 328 (329)
T ss_dssp E
T ss_pred c
Confidence 6
No 22
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=3.8e-53 Score=414.80 Aligned_cols=309 Identities=16% Similarity=0.191 Sum_probs=243.9
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccc--cccccCCCcccCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQC--KLARSKSCIDEYSCSP 110 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C--~~~~~~~~~~~~~~~~ 110 (435)
++..||.+ ..+.+|+++|+|| ||+++|+|||||+++||+|..| .+..| ..+..|++. .
T Consensus 6 ~~~~~l~n-~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~~~y~~~------~ 65 (330)
T 1yg9_A 6 PLYKLVHV-FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQEC-----------VGGACVCPNLQKYEKL------K 65 (330)
T ss_dssp CSCSCEEE-EECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTC-----------CSGGGGSTTCCCCCCS------S
T ss_pred eeEeeeec-CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCC-----------CCccCcccccCccCCC------C
Confidence 44567775 3467999999999 7999999999999999999765 34566 555556552 3
Q ss_pred CCCCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCCCCCcceEEeeCC
Q 038219 111 GPGCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGLATGVKGMAGLGR 190 (435)
Q Consensus 111 ~~~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~ 190 (435)
+ ++....+.|.+. |++|++. |.+++|+|+|+ + +.++++.|||++...........+||||||+
T Consensus 66 S-T~~~~~~~~~i~--Yg~Gs~~-G~~~~Dtv~ig------~-------~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~ 128 (330)
T 1yg9_A 66 P-KYISDGNVQVKF--FDTGSAV-GRGIEDSLTIS------Q-------LTTSQQDIVLADELSQEVCILSADVVVGIAA 128 (330)
T ss_dssp C-EEEEEEEEEEEE--TTTEEEE-EEEEEEEEEET------T-------EEEEEEEEEEEEEECTHHHHTTCSEEEECSC
T ss_pred C-ceEECCCEEEEE--ECCceEE-EEEEEEEEEEC------C-------EEEcCeEEEEEEEcccccccccCceEEEcCc
Confidence 3 555667889999 8999886 99999999994 3 4788999999987611111235799999999
Q ss_pred CCCc-------hhhhhhhccCCCCceEEecCCCCCC--CceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCC
Q 038219 191 TQVS-------LPSQFSAAFNFDRKFSICLSSSTTS--NGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPS 261 (435)
Q Consensus 191 ~~~s-------~~~ql~~~~~i~~~FS~~L~~~~~~--~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~ 261 (435)
+..+ ++.+|.+++.++++||+||.+..+. .|.|+|||+|+ .++.|++.|+|+.. .
T Consensus 129 ~~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~ 192 (330)
T 1yg9_A 129 PGCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDW--KYVDGEFTYVPLVG--------------D 192 (330)
T ss_dssp TTSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCG--GGEEEEEEEEEBSC--------------T
T ss_pred chhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCH--HHccCceEEEECCC--------------C
Confidence 8766 7788999987878899999886322 79999999997 67889999999973 4
Q ss_pred cceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCC-CCC-cccce
Q 038219 262 TDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKP-IAP-FGACF 339 (435)
Q Consensus 262 ~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~-~~~-~~~C~ 339 (435)
.+|.|.+++|+|+++.+. . ....+||||||++++||+++|++|.+++.+... ... ... ..+|+
T Consensus 193 ~~w~v~l~~i~v~~~~~~-~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~g~~~~~~~~C~ 257 (330)
T 1yg9_A 193 DSWKFRLDGVKIGDTTVA-P---------AGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE-----KTTTRRICKLDCS 257 (330)
T ss_dssp TSCCEECSEEEETTEEEE-C---------TTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE-----ECSSCEEEEECGG
T ss_pred CEEEEEeCeEEECCEEEc-C---------CCcEEEEecCCccccCCHHHHHHHHHHhCCccc-----CCCceEEEEEECC
Confidence 799999999999998764 1 136799999999999999999999998843321 011 011 23565
Q ss_pred eccCCCCcccCeEEEEEcCCceEEEEcCCccEEEeCCceEEE-EEEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEe
Q 038219 340 NSSFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGKDAMCL-AFVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFS 418 (435)
Q Consensus 340 ~~~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa 418 (435)
.. ..+|+|+|+|+| ++++||+++|+++. +..|+ ++..... .+.||||++|||++|+|||++++|||||
T Consensus 258 ~~-----~~~p~i~f~fgg--~~~~l~~~~y~~~~--~~~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfA 326 (330)
T 1yg9_A 258 KI-----PSLPDVTFVING--RNFNISSQYYIQQN--GNLCYSGFQPCGH--SDHFFIGDFFVDHYYSEFNWENKTMGFG 326 (330)
T ss_dssp GG-----GGSCCEEEEETT--EEEEECHHHHEEEE--TTEEEESEEEETT--CSSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred Cc-----cccCcEEEEECC--EEEEECHHHhcccC--CCcEEEEEEeCCC--CCeEEecHHHhhheEEEEECCCCEEEEE
Confidence 43 268999999976 99999999999987 46898 4554322 3579999999999999999999999999
Q ss_pred ec
Q 038219 419 SS 420 (435)
Q Consensus 419 ~~ 420 (435)
+.
T Consensus 327 ~~ 328 (330)
T 1yg9_A 327 RS 328 (330)
T ss_dssp EE
T ss_pred EC
Confidence 74
No 23
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=8e-53 Score=426.19 Aligned_cols=310 Identities=13% Similarity=0.194 Sum_probs=247.4
Q ss_pred eEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCC
Q 038219 34 LALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPG 113 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~ 113 (435)
..+||.. ..+.+|+++|+||||||++.|+|||||+++||+|..| .+..|..+..|++. .+++
T Consensus 128 ~~~~L~n-~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C-----------~~~~C~~~~~ydps------~SsT 189 (453)
T 2bju_A 128 DNIELVD-FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKC-----------TTAGCLTKHLYDSS------KSRT 189 (453)
T ss_dssp EEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSTTGGGSCCBCGG------GCTT
T ss_pred CceeeEe-cCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCC-----------CccccCCCCcCCCc------cCCc
Confidence 4688875 4678999999999999999999999999999999765 44567766666653 3556
Q ss_pred CCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCc--CCCC-CCCcceEEeeCC
Q 038219 114 CNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFL--LDGL-ATGVKGMAGLGR 190 (435)
Q Consensus 114 c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~--~~~~-~~~~~GIlGLg~ 190 (435)
+....|.|.+. |++|++. |.+++|+|+++ + +.++ +.|||++... +..+ ....+||||||+
T Consensus 190 ~~~~~~~~~i~--YgdGs~~-G~~~~Dtv~ig------~-------~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~ 252 (453)
T 2bju_A 190 YEKDGTKVEMN--YVSGTVS-GFFSKDLVTVG------N-------LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGW 252 (453)
T ss_dssp CEEEEEEEEEE--CSSSEEE-EEEEEEEEEET------T-------EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSC
T ss_pred eeECCcEEEEE--cCCCCeE-EEEEEEEEEEe------C-------cEEE-EEEEEEEEecccCccccccCCceeEeccC
Confidence 67778999999 8988877 99999999994 3 4788 9999998863 2111 246799999998
Q ss_pred CCC------chhhhhhhccCC-CCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcc
Q 038219 191 TQV------SLPSQFSAAFNF-DRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTD 263 (435)
Q Consensus 191 ~~~------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~ 263 (435)
+.. +++.+|.+++.+ +++||+||.+....+|.|+|||+|+ .++.|++.|+|+.. ..+
T Consensus 253 ~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~--~~y~G~l~~~pv~~--------------~~~ 316 (453)
T 2bju_A 253 KDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEE--RFYEGPLTYEKLNH--------------DLY 316 (453)
T ss_dssp GGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCG--GGEEEEEEEEEEEE--------------ETT
T ss_pred CcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCH--HHcCCceEEEecCC--------------Cce
Confidence 754 466789999988 5889999998645689999999997 67889999999974 368
Q ss_pred eEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceeccC
Q 038219 264 YFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSSF 343 (435)
Q Consensus 264 y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~ 343 (435)
|.|.++ |+|++ .+ + . ...+||||||++++||+++|++|.+++.+.. ...+......|+.
T Consensus 317 w~V~l~-I~Vgg-~~-~--~--------~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~-----~~~g~~~~v~C~~--- 375 (453)
T 2bju_A 317 WQITLD-AHVGN-IM-L--E--------KANCIVDSGTSAITVPTDFLNKMLQNLDVIK-----VPFLPFYVTLCNN--- 375 (453)
T ss_dssp EEEEEE-EEETT-EE-E--E--------EEEEEECTTCCSEEECHHHHHHHTTTSSCEE-----CTTSSCEEEETTC---
T ss_pred EEEEEE-EEECc-EE-e--c--------cccEEEcCCCCeEecCHHHHHHHHHHhCCcc-----cCCCceEEEecCC---
Confidence 999999 99999 33 1 1 2579999999999999999999988764321 1111022345765
Q ss_pred CCCcccCeEEEEEcCCceEEEEcCCccEEEeCC--ceEEE-EEEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEeec
Q 038219 344 IGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGK--DAMCL-AFVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFSSS 420 (435)
Q Consensus 344 ~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~~ 420 (435)
..+|+|+|+|+| ++|+||+++|+++... +..|+ ++...+.. .+.||||++|||++|+|||++++|||||+.
T Consensus 376 ---~~~P~itf~fgg--~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~-~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~ 449 (453)
T 2bju_A 376 ---SKLPTFEFTSEN--GKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFP-VPTFILGDPFMRKYFTVFDYDNHSVGIALA 449 (453)
T ss_dssp ---TTCCCEEEECSS--CEEEECHHHHEEECTTTSTTEEEECEEECCCS-SCEEEECHHHHHHEEEEEETTTTEEEEEEE
T ss_pred ---CCCCcEEEEECC--EEEEECHHHhEeecccCCCceEEEEEEeCCCC-CCCEEECHHHhhcEEEEEECCCCEEEEEEc
Confidence 268999999976 8999999999998753 46898 56665431 358999999999999999999999999985
Q ss_pred C
Q 038219 421 L 421 (435)
Q Consensus 421 ~ 421 (435)
.
T Consensus 450 ~ 450 (453)
T 2bju_A 450 K 450 (453)
T ss_dssp C
T ss_pred c
Confidence 4
No 24
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=7.2e-52 Score=407.59 Aligned_cols=309 Identities=16% Similarity=0.254 Sum_probs=236.7
Q ss_pred eEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCC
Q 038219 34 LALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPG 113 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~ 113 (435)
-.+||.+ .+.+|+++|.||||+|++.|+|||||+++||+|.+.+. ++.+
T Consensus 3 ~~~~l~n--~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~~y~-----------------------------~s~S 51 (340)
T 1wkr_A 3 GSVPATN--QLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGADKSYV-----------------------------KTST 51 (340)
T ss_dssp EEEEEEE--CSSCEEEEEEETTTTEEEEEEEETTCCCCEECSSSCCC-----------------------------CCTT
T ss_pred ccEeeec--cCcEEEEEEEECCCCcEEEEEEeCCChhheecCCCccC-----------------------------CcCC
Confidence 3688988 46799999999999999999999999999999853211 1111
Q ss_pred CCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCCCCCcceEEeeCCCCC
Q 038219 114 CNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGLATGVKGMAGLGRTQV 193 (435)
Q Consensus 114 c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~~~~ 193 (435)
++...|.|.+. |++|++. |.+++|+|+|+ + +.++++.|||++... + +...+||||||++.+
T Consensus 52 s~~~~~~~~i~--Yg~Gs~~-G~~~~Dtv~~g------~-------~~v~~~~fg~~~~~~--~-~~~~~GilGLg~~~~ 112 (340)
T 1wkr_A 52 SSATSDKVSVT--YGSGSFS-GTEYTDTVTLG------S-------LTIPKQSIGVASRDS--G-FDGVDGILGVGPVDL 112 (340)
T ss_dssp CEEEEEEEEEE--CSSCEEE-EEEEEEEEEET------T-------EEEEEEEEEEEEEEE--S-CTTCSEEEECSCGGG
T ss_pred ccccCceEEEE--ECCcEEE-EEEEEEEEEEC------C-------EEEcceEEEEEEccC--C-CcCCCcEEECCcccc
Confidence 23456889999 8888877 99999999994 3 478899999998863 2 236899999998754
Q ss_pred c--------------hhhhhhhccCCC-CceEEecCCC---CCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcc
Q 038219 194 S--------------LPSQFSAAFNFD-RKFSICLSSS---TTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLA 255 (435)
Q Consensus 194 s--------------~~~ql~~~~~i~-~~FS~~L~~~---~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~ 255 (435)
+ ++.+|.+++.|+ ++||+||.+. ....|.|+|||+|+ .++.|++.|+|++.+..
T Consensus 113 s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~~~------ 184 (340)
T 1wkr_A 113 TVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDS--SKYTGSITYTPITSTSP------ 184 (340)
T ss_dssp GTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCG--GGCSSCCEEEECCSSTT------
T ss_pred ccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccCh--hhcccceEEEECccCCC------
Confidence 3 567888999884 7899999864 23579999999997 68899999999987531
Q ss_pred cCCCCCcceEEEEeEEEECC-EEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 038219 256 FKGDPSTDYFIEIKSILIGG-NVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAP 334 (435)
Q Consensus 256 ~~~~~~~~y~v~l~~i~v~~-~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~ 334 (435)
...+|.|. .+|+|++ +.+.. ...+||||||++++||+++|++|.+++.+... . .....
T Consensus 185 ----~~~~w~v~-~~i~v~~~~~l~~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~----~-~~g~~ 243 (340)
T 1wkr_A 185 ----ASAYWGIN-QSIRYGSSTSILS-----------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD----N-NTGLL 243 (340)
T ss_dssp ----GGGSSEEE-EEEEETTTEEEEE-----------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC----T-TTSSE
T ss_pred ----CcceEEEE-eeEEECCCeEccC-----------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc----C-CCCeE
Confidence 24799999 9999998 76631 14699999999999999999999877753321 1 11112
Q ss_pred cccceeccCCCCcccCeEEEEEcCCceEEEEcCCccEEEeC-------CceEEE-EEEeCCCC--CCCeeeechhhhccc
Q 038219 335 FGACFNSSFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVG-------KDAMCL-AFVDGGVN--PRTSVVIGGYQLEDN 404 (435)
Q Consensus 335 ~~~C~~~~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~-------~~~~C~-~~~~~~~~--~~~~~ILG~~flr~~ 404 (435)
...|.... .+|+|+|+|+| .+|+|++++|+++.. +...|+ ++...... .+..||||+.|||++
T Consensus 244 ~~~C~~~~-----~~p~i~f~f~g--~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~ 316 (340)
T 1wkr_A 244 RLTTAQYA-----NLQSLFFTIGG--QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERF 316 (340)
T ss_dssp EECHHHHH-----TCCCEEEEETT--EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSE
T ss_pred Eeeccccc-----cCCcEEEEECC--EEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhhe
Confidence 23565432 68999999987 899999999997643 123565 56553211 134699999999999
Q ss_pred EEEEeCCCCEEEEeecCCcccCCccCccCC
Q 038219 405 LLEFNLAKSRLGFSSSLLSWQTTCSKLTSN 434 (435)
Q Consensus 405 yvvfD~~~~rIGfa~~~~~~~~~C~~~~~~ 434 (435)
|+|||++++|||||+ +.|....+|
T Consensus 317 y~vfD~~~~~igfA~------~~~~~~~~~ 340 (340)
T 1wkr_A 317 YSVYDTTNKRLGLAT------TSFTTATSN 340 (340)
T ss_dssp EEEEETTTTEEEEEE------CTTTTCCCC
T ss_pred EEEEeCCCCeEEEEe------cCCCCCCCC
Confidence 999999999999997 566655543
No 25
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=6.1e-52 Score=414.68 Aligned_cols=327 Identities=19% Similarity=0.225 Sum_probs=243.1
Q ss_pred eEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCCCC
Q 038219 37 LVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGCNN 116 (435)
Q Consensus 37 pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c~~ 116 (435)
||..+ .+..|+++|+||||||+++|+|||||+++||+|.+|. .| +..|++ ..|+++..
T Consensus 6 ~l~~~-~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~-------------~~--~~~f~~------~~SsT~~~ 63 (383)
T 2ewy_A 6 NLQGD-SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS-------------YI--DTYFDT------ERSSTYRS 63 (383)
T ss_dssp CEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT-------------TB--SCCCCG------GGCTTCEE
T ss_pred eccCC-CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC-------------cc--ccCccc------ccCcccee
Confidence 34442 4568999999999999999999999999999998762 12 122333 13445566
Q ss_pred CCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCC-CCCcceEEeeCCCCCc-
Q 038219 117 HTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGL-ATGVKGMAGLGRTQVS- 194 (435)
Q Consensus 117 ~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~-~~~~~GIlGLg~~~~s- 194 (435)
..|.|.+. |++|++. |.+++|+|+|++.. ...+ .+.|++......... ....+||||||++.++
T Consensus 64 ~~~~~~i~--Yg~Gs~~-G~~~~Dtv~i~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~ 129 (383)
T 2ewy_A 64 KGFDVTVK--YTQGSWT-GFVGEDLVTIPKGF----------NTSF-LVNIATIFESENFFLPGIKWNGILGLAYATLAK 129 (383)
T ss_dssp EEEEEEEE--CSSCEEE-EEEEEEEEEETTTE----------EEEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCS
T ss_pred CCceEEEE--ECCcEEE-EEEEEEEEEECCCc----------ccee-EEEEEEEEeecceeeccCcCceEEecCchhccc
Confidence 77899999 8888887 99999999994210 0111 356888654421111 1357999999987653
Q ss_pred -------hhhhhhhccCCCCceEEecCCC-------CCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCC
Q 038219 195 -------LPSQFSAAFNFDRKFSICLSSS-------TTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDP 260 (435)
Q Consensus 195 -------~~~ql~~~~~i~~~FS~~L~~~-------~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~ 260 (435)
+..+|.+++.++++||+||.+. ....|.|+|||+|+ .++.|++.|+|++.
T Consensus 130 ~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~-------------- 193 (383)
T 2ewy_A 130 PSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEP--SLYKGDIWYTPIKE-------------- 193 (383)
T ss_dssp SCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCG--GGCCSCEEEEECSS--------------
T ss_pred ccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccch--hhccCccEEEecCC--------------
Confidence 5568888888877899998641 24589999999997 78899999999975
Q ss_pred CcceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCC---CCCccc
Q 038219 261 STDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKP---IAPFGA 337 (435)
Q Consensus 261 ~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~---~~~~~~ 337 (435)
..+|.|.+++|+|+++.+.++...+. ...+||||||++++||+++|++|++++.+... ..+... ......
T Consensus 194 ~~~~~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~~~ 266 (383)
T 2ewy_A 194 EWYYQIEILKLEIGGQSLNLDCREYN-----ADKAIVDSGTTLLRLPQKVFDAVVEAVARASL--IPEFSDGFWTGSQLA 266 (383)
T ss_dssp BTTBBCCEEEEEETTEECCCCTTTTT-----SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC--SSCCCHHHHHTSEEE
T ss_pred CceEEEEEEEEEECCEEccccccccC-----CccEEEEcCCccccCCHHHHHHHHHHHhhhcc--cccCccccccccccc
Confidence 36899999999999998876543321 35799999999999999999999999987643 111111 012457
Q ss_pred ceeccCCCCcccCeEEEEEcCC----ceEEEEcCCccEEEeC---CceEEEEE-EeCCCCCCCeeeechhhhcccEEEEe
Q 038219 338 CFNSSFIGGTTAPEIHLVLPGN----NRVWKIYGANSMVRVG---KDAMCLAF-VDGGVNPRTSVVIGGYQLEDNLLEFN 409 (435)
Q Consensus 338 C~~~~~~~~~~~P~i~~~f~g~----~~~~~ip~~~y~~~~~---~~~~C~~~-~~~~~~~~~~~ILG~~flr~~yvvfD 409 (435)
|+.........+|+|+|+|+|+ .++|+||+++|+++.. .+..|+++ +... ...||||+.|||++|+|||
T Consensus 267 C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD 343 (383)
T 2ewy_A 267 CWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS---TNALVIGATVMEGFYVIFD 343 (383)
T ss_dssp EECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE---SSCEEECHHHHTTEEEEEE
T ss_pred cccCCcccHhhCCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCC---CCcEEEChHHhCCeeEEEE
Confidence 9876543333689999999983 2589999999999864 25689864 2211 2469999999999999999
Q ss_pred CCCCEEEEeecCCcccCCccCc
Q 038219 410 LAKSRLGFSSSLLSWQTTCSKL 431 (435)
Q Consensus 410 ~~~~rIGfa~~~~~~~~~C~~~ 431 (435)
++++|||||+ ++|...
T Consensus 344 ~~~~rIGfA~------~~c~~~ 359 (383)
T 2ewy_A 344 RAQKRVGFAA------SPCAEI 359 (383)
T ss_dssp TTTTEEEEEE------CTTCBS
T ss_pred CCCCeEEEEe------ccCCCc
Confidence 9999999997 677653
No 26
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=5.2e-52 Score=424.29 Aligned_cols=329 Identities=18% Similarity=0.244 Sum_probs=248.5
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGP 112 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~ 112 (435)
...+||.+. .+.+|+++|.||||||+|.|+|||||+++||+|..|.. +..|..+..|++. .++
T Consensus 41 ~~~~~l~n~-~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~----------~~~C~~~~~y~~~------~Ss 103 (478)
T 1qdm_A 41 GDIVALKNY-MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYF----------SIACYLHSRYKAG------ASS 103 (478)
T ss_dssp SCSGGGCCG-GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCS----------CGGGGGSCCBCGG------GCT
T ss_pred CceEEeEec-cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCC----------CccccCCCCCCcc------cCC
Confidence 345777763 56899999999999999999999999999999987621 3457666666653 355
Q ss_pred CCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCC-CCCCCcceEEeeCCC
Q 038219 113 GCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLD-GLATGVKGMAGLGRT 191 (435)
Q Consensus 113 ~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~ 191 (435)
++....|.|.+. |++|++. |.+++|+|+|+ + +.++++.|||++..... +.....+||||||++
T Consensus 104 T~~~~~~~~~i~--Yg~Gs~~-G~~~~Dtv~ig------~-------~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~ 167 (478)
T 1qdm_A 104 TYKKNGKPAAIQ--YGTGSIA-GYFSEDSVTVG------D-------LVVKDQEFIEATKEPGITFLVAKFDGILGLGFK 167 (478)
T ss_dssp TCBCCCCEEEEE--ETTEEEE-EEEEEEEEEET------T-------EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCG
T ss_pred CeeeCCcEEEEE--cCCCCeE-EEEEEEEEEEC------C-------eEECCEEEEEEEecCCcccccccccceeccccc
Confidence 667778999999 8888877 99999999994 3 47889999999875321 112467999999998
Q ss_pred CCc------hhhhhhhccCC-CCceEEecCCCC--CCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCc
Q 038219 192 QVS------LPSQFSAAFNF-DRKFSICLSSST--TSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPST 262 (435)
Q Consensus 192 ~~s------~~~ql~~~~~i-~~~FS~~L~~~~--~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~ 262 (435)
.++ +..+|.+++.+ +++||+||.+.. ..+|.|+|||+|+ .++.|++.|+|+.. ..
T Consensus 168 ~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~--~~~~G~l~~~pv~~--------------~~ 231 (478)
T 1qdm_A 168 EISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDP--KHYVGEHTYVPVTQ--------------KG 231 (478)
T ss_dssp GGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCT--TSEEEEEEEEEEEE--------------ET
T ss_pred ccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCH--hhcCCCceEEeccC--------------CC
Confidence 765 45678888888 478999998852 3589999999997 67889999999974 36
Q ss_pred ceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHh--------------------
Q 038219 263 DYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKAL-------------------- 322 (435)
Q Consensus 263 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~-------------------- 322 (435)
+|.|.+++|.|+++.+.+.. +...+||||||+++++|+++|++|.++|.+..
T Consensus 232 ~w~v~l~~i~v~g~~~~~~~--------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~ 303 (478)
T 1qdm_A 232 YWQFDMGDVLVGGKSTGFCA--------GGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDL 303 (478)
T ss_dssp TEEEEECCEEETTEECSTTT--------TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHH
T ss_pred eEEEEEeEEEECCEEEeecC--------CCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHh
Confidence 99999999999998765432 13679999999999999999999998885310
Q ss_pred --h----------cCCCCCCCC----------------------------------------------------CCcccc
Q 038219 323 --L----------FNIPRVKPI----------------------------------------------------APFGAC 338 (435)
Q Consensus 323 --~----------~~~~~~~~~----------------------------------------------------~~~~~C 338 (435)
. .++...... .....|
T Consensus 304 l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C 383 (478)
T 1qdm_A 304 LLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLC 383 (478)
T ss_dssp HHTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHT
T ss_pred hhhccChhhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHh
Confidence 0 000000000 000123
Q ss_pred eecc---------CCCCcccCeEEEEEcCCceEEEEcCCccEEEeCC--ceEEEE-EEeCCC--CCCCeeeechhhhccc
Q 038219 339 FNSS---------FIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGK--DAMCLA-FVDGGV--NPRTSVVIGGYQLEDN 404 (435)
Q Consensus 339 ~~~~---------~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~--~~~C~~-~~~~~~--~~~~~~ILG~~flr~~ 404 (435)
+..+ |.....+|+|+|+|+| ++|+|+|++|+++... +..|++ +...+. ..++.||||+.|||++
T Consensus 384 ~~~~~~~g~~~v~C~~~~~lP~i~f~~gg--~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~ 461 (478)
T 1qdm_A 384 NRLPSPMGESAVDCGSLGSMPDIEFTIGG--KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPY 461 (478)
T ss_dssp TCBCCSSSCCEECGGGGTTCCCEEEEETT--EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTE
T ss_pred hccCCCCCeEEeecccccccccEEEEECC--EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccE
Confidence 3322 1111368999999987 9999999999998764 357995 654331 1246899999999999
Q ss_pred EEEEeCCCCEEEEeec
Q 038219 405 LLEFNLAKSRLGFSSS 420 (435)
Q Consensus 405 yvvfD~~~~rIGfa~~ 420 (435)
|+|||++|+|||||++
T Consensus 462 y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 462 HTVFDYGKLRIGFAKA 477 (478)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEECCCCEEEEEeC
Confidence 9999999999999973
No 27
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.8e-52 Score=424.11 Aligned_cols=310 Identities=15% Similarity=0.214 Sum_probs=246.5
Q ss_pred ceEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCC
Q 038219 33 ALALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGP 112 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~ 112 (435)
...+||.. ..+.+|+++|+||||||++.|+|||||+++||+|..| .+..|..+..|++. .|+
T Consensus 126 ~~~~pL~n-~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C-----------~s~~C~~~~~ydps------~Ss 187 (451)
T 3qvc_A 126 FDNVELKD-LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKC-----------TSESCESKNHYDSS------KSK 187 (451)
T ss_dssp -CCCCGGG-GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTC-----------CSGGGTTSCCBCGG------GCT
T ss_pred CCccceee-cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCC-----------CccccCCCCCCCCC------CCc
Confidence 34567775 3578999999999999999999999999999999764 45677766667653 355
Q ss_pred CCCCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccC----CcCCCCCCCcceEEee
Q 038219 113 GCNNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPT----FLLDGLATGVKGMAGL 188 (435)
Q Consensus 113 ~c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~----~~~~~~~~~~~GIlGL 188 (435)
++....|.|.+. |++|++. |.+++|+|+++ + +.++ +.|||++. ... ......+|||||
T Consensus 188 T~~~~~~~f~i~--YgdGs~~-G~~~~Dtv~ig------g-------~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGL 249 (451)
T 3qvc_A 188 TYEKDDTPVKLT--SKAGTIS-GIFSKDLVTIG------K-------LSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGL 249 (451)
T ss_dssp TCEEEEEEEEEE--CSSEEEE-EEEEEEEEEET------T-------EEEE-EEEEEEEEEEECTTH-HHHSCCCEEEEC
T ss_pred ccccCCCEEEEE--ECCCEEE-EEEEEEEEEEC------C-------EEEE-EEEEEEEeccccCCC-ccCCCCCEEEec
Confidence 566678999999 8998877 99999999994 3 4788 99999987 421 112357999999
Q ss_pred CCCCC------chhhhhhhccCC-CCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCC
Q 038219 189 GRTQV------SLPSQFSAAFNF-DRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPS 261 (435)
Q Consensus 189 g~~~~------s~~~ql~~~~~i-~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~ 261 (435)
|++.. +++.+|.+++.| +++||+||.+.....|.|+|||+|+ .++.|++.|+|+.. +
T Consensus 250 g~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~--s~y~G~l~~~pv~~--------------~ 313 (451)
T 3qvc_A 250 GWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEE--RFFDGPLNYEKLNH--------------D 313 (451)
T ss_dssp SSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCG--GGEEEEEEEEECSS--------------T
T ss_pred CCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcch--hhcCCceEEEEccc--------------C
Confidence 98753 578899999998 4789999999755689999999998 78889999999974 4
Q ss_pred cceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceec
Q 038219 262 TDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNS 341 (435)
Q Consensus 262 ~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~ 341 (435)
.+|.|.++ |+|+++ .. ....+||||||++++||++++++|.+++.+... . .......+|.
T Consensus 314 ~~w~v~l~-I~Vgg~-~~-----------~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~----~-~~g~y~v~C~-- 373 (451)
T 3qvc_A 314 LMWQVDLD-VHFGNV-SS-----------KKANVILDSATSVITVPTEFFNQFVESASVFKV----P-FLSLYVTTCG-- 373 (451)
T ss_dssp TSSEEEEE-EEETTE-EE-----------EEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC----T-TSSCEEEETT--
T ss_pred CeeEEEEE-EEECCc-cC-----------CCceEEEeCCCccccCCHHHHHHHHHHcCCeec----C-CCCeEEeeCC--
Confidence 79999999 999997 11 025799999999999999999999888743321 0 0111123454
Q ss_pred cCCCCcccCeEEEEEcCCceEEEEcCCccEEEeCC--ceEEEE-EEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEe
Q 038219 342 SFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGK--DAMCLA-FVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFS 418 (435)
Q Consensus 342 ~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa 418 (435)
...+|+|+|+|+| .+++||+++|++...+ +..|+. +...+.. .+.||||++|||++|+|||++++|||||
T Consensus 374 ----~~~~P~itf~fgg--~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~-~~~~ILG~~FLr~~YvVfD~~n~rIGfA 446 (451)
T 3qvc_A 374 ----NTKLPTLEYRSPN--KVYTLEPKQYLEPLENIFSALCMLNIVPIDLE-KNTFVLGDPFMRKYFTVYDYDNHTVGFA 446 (451)
T ss_dssp ----CTTCCCEEEEETT--EEEEECHHHHEEECTTTSTTEEEECEEECCCS-TTEEEECHHHHHHEEEEEETTTTEEEEE
T ss_pred ----cCcCCcEEEEECC--EEEEEcHHHheeecccCCCCeEEEEEEeCCCC-CCCEEECHHHhhcEEEEEECCCCEEEEE
Confidence 2378999999987 9999999999998752 467884 5554421 3589999999999999999999999999
Q ss_pred ecC
Q 038219 419 SSL 421 (435)
Q Consensus 419 ~~~ 421 (435)
++.
T Consensus 447 ~ak 449 (451)
T 3qvc_A 447 LAK 449 (451)
T ss_dssp EEC
T ss_pred Ecc
Confidence 854
No 28
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.8e-51 Score=411.45 Aligned_cols=322 Identities=18% Similarity=0.225 Sum_probs=243.8
Q ss_pred CceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCCCCCCcccee
Q 038219 44 TLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGCNNHTCSRFP 123 (435)
Q Consensus 44 ~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 123 (435)
...|+++|.||||||+++|+|||||+++||+|.+| |..+..|++. .++++....|.|.+
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c---------------~~~~~~y~~~------~SsT~~~~~~~~~i 85 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH---------------PFLHRYYQRQ------LSSTYRDLRKGVYV 85 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC---------------TTCSCCCCGG------GCTTCEEEEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC---------------CcccCCcCcc------cCcccccCCCEEEE
Confidence 46899999999999999999999999999999865 2223334432 34555667899999
Q ss_pred ecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccC-ceEEecccCCcCCCC-CCCcceEEeeCCCCC--------
Q 038219 124 ANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVP-NLIFSCGPTFLLDGL-ATGVKGMAGLGRTQV-------- 193 (435)
Q Consensus 124 ~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~-~~~FG~~~~~~~~~~-~~~~~GIlGLg~~~~-------- 193 (435)
. |++|++. |.+++|+|+|++ . ..+. .+.|++......... ....+||||||++..
T Consensus 86 ~--Yg~Gs~~-G~~~~D~v~ig~-----~-------~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~ 150 (402)
T 3vf3_A 86 P--YTQGKWE-GELGTDLVSIPH-----G-------PNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLE 150 (402)
T ss_dssp E--CSSCEEE-EEEEEEEEECTT-----S-------CSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSC
T ss_pred E--ECcEEEE-EEEEEEEEEECC-----c-------cccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCC
Confidence 9 8999987 999999999952 1 0222 245777665421111 246799999998653
Q ss_pred chhhhhhhccCCCCceEEecCCC----------CCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcc
Q 038219 194 SLPSQFSAAFNFDRKFSICLSSS----------TTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTD 263 (435)
Q Consensus 194 s~~~ql~~~~~i~~~FS~~L~~~----------~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~ 263 (435)
+++.+|.+++.++++||+||.+. ....|.|+|||+|+ .++.|++.|+|+.. ..+
T Consensus 151 ~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~ 214 (402)
T 3vf3_A 151 PFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDH--SLYTGSLWYTPIRR--------------EWY 214 (402)
T ss_dssp CHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCG--GGEEEEEEEEECSS--------------BTT
T ss_pred cHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCc--ccccCceEEEeCCc--------------CcE
Confidence 56778999999988899999742 24579999999997 78889999999975 368
Q ss_pred eEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCC---CCCccccee
Q 038219 264 YFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKP---IAPFGACFN 340 (435)
Q Consensus 264 y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~---~~~~~~C~~ 340 (435)
|.|.+++|+|+++.+.++...+. ...+||||||++++||+++|++|.+++.+... ..+... ......|+.
T Consensus 215 w~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~--~~~~~~~~~~~~~~~C~~ 287 (402)
T 3vf3_A 215 YEVIIVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS--TEKFPDGFWLGEQLVCWQ 287 (402)
T ss_dssp BEECEEEEEETTEECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT--TSCCCTTGGGTCSCEEEE
T ss_pred EEEEEeEEEECCEEecccccccC-----CCeEEEECCCCcccCCHHHHHHHHHHHhhhcc--ccccCccccccccccccc
Confidence 99999999999998876543321 35799999999999999999999999998853 111111 112468988
Q ss_pred ccCCCCcccCeEEEEEcCC----ceEEEEcCCccEEEeCCc----eEEEEEEeCCCCCCCeeeechhhhcccEEEEeCCC
Q 038219 341 SSFIGGTTAPEIHLVLPGN----NRVWKIYGANSMVRVGKD----AMCLAFVDGGVNPRTSVVIGGYQLEDNLLEFNLAK 412 (435)
Q Consensus 341 ~~~~~~~~~P~i~~~f~g~----~~~~~ip~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~ 412 (435)
........+|+|+|+|++. .++++||+++|+++..+. ..|+++..... .+.||||+.|||++|+|||+++
T Consensus 288 ~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~--~~~~ILG~~fl~~~yvvfD~~~ 365 (402)
T 3vf3_A 288 AGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS--STGTVMGAVIMEGFYVVFDRAR 365 (402)
T ss_dssp TTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEE--SSCEEECHHHHTTEEEEEEGGG
T ss_pred cccchHhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCC--CCcEEEChHHhCCeEEEEECCC
Confidence 7644334799999999983 136999999999987542 48996322111 2469999999999999999999
Q ss_pred CEEEEeecCCcccCCccCcc
Q 038219 413 SRLGFSSSLLSWQTTCSKLT 432 (435)
Q Consensus 413 ~rIGfa~~~~~~~~~C~~~~ 432 (435)
+|||||+ ++|++..
T Consensus 366 ~rIGfA~------~~c~~~~ 379 (402)
T 3vf3_A 366 KRIGFAV------SACHVHD 379 (402)
T ss_dssp TEEEEEE------ETTCCBC
T ss_pred CEEEEEe------cccCccc
Confidence 9999996 7787654
No 29
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-51 Score=401.95 Aligned_cols=305 Identities=16% Similarity=0.177 Sum_probs=235.1
Q ss_pred EeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCCC
Q 038219 36 LLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGCN 115 (435)
Q Consensus 36 ~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c~ 115 (435)
+++.....+.+|+++|.|| +|+++|+|||||+++||+|.+| .+..|..+..|++. .++ +.
T Consensus 5 v~~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~c~~~~~y~~~------~Ss-~~ 64 (325)
T 1ibq_A 5 AVTTPQNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDEL-----------PSSEQTGHDLYTPS------SSA-TK 64 (325)
T ss_dssp EEEEECTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTS-----------CHHHHTTSCCCBCC------SSC-EE
T ss_pred EEeEEcCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCC-----------CccccCCCCCCCch------hcC-Cc
Confidence 3444444678999999999 7999999999999999999875 23345555555542 222 44
Q ss_pred CCCccceeecccCCcc-ceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCC-CCCcceEEeeCCCCC
Q 038219 116 NHTCSRFPANSISRES-TNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGL-ATGVKGMAGLGRTQV 193 (435)
Q Consensus 116 ~~~~~~~~~y~y~~g~-~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~-~~~~~GIlGLg~~~~ 193 (435)
...|.|.+. |++|+ +. |.+++|+|+|+ + +.++++.|||++....... ....+||||||++..
T Consensus 65 ~~~~~~~i~--Yg~Gs~~~-G~~~~D~v~ig------~-------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~ 128 (325)
T 1ibq_A 65 LSGYSWDIS--YGDGSSAS-GDVYRDTVTVG------G-------VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSI 128 (325)
T ss_dssp CTTCBEEEE--CSSSCEEE-EEEEEEEEEET------T-------EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGG
T ss_pred cCCCEEEEE--eCCCCEEE-EEEEEeEEEEC------C-------EEEcceEEEEEEecCccccccCCCceEEEeCcccc
Confidence 567999999 88887 56 99999999994 3 4788999999987532111 136799999999754
Q ss_pred c---------hhhhhhhccCCCCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcce
Q 038219 194 S---------LPSQFSAAFNFDRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDY 264 (435)
Q Consensus 194 s---------~~~ql~~~~~i~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y 264 (435)
+ +..||.++ .-+++||+||.+. ..|.|+|||+|+ .++.|++.|+|+... ..+|
T Consensus 129 s~~~p~~~~~~~~~l~~~-i~~~~FS~~l~~~--~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~~w 190 (325)
T 1ibq_A 129 NTVQPKAQTTFFDTVKSQ-LDSPLFAVQLKHD--APGVYDFGYIDD--SKYTGSITYTDADSS-------------QGYW 190 (325)
T ss_dssp CCCBSSCCCCHHHHHGGG-SSSSEEEEEEETT--EEEEEEESSCCG--GGBSSCCEEEECBCT-------------TSSC
T ss_pred cccCcCCCCCHHHHHHHh-cCCcEEEEEecCC--CCceEEECCcCh--hhccCceEEEEcCCC-------------CceE
Confidence 4 56788776 3258899999874 589999999997 788999999999743 4689
Q ss_pred EEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceeccCC
Q 038219 265 FIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSSFI 344 (435)
Q Consensus 265 ~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~~ 344 (435)
.|.+++|+|+++.+.. ....+||||||++++||+++|++|.+++.+.. +..... .....|+.
T Consensus 191 ~v~l~~i~v~~~~~~~----------~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~---~~~~~g-~~~~~C~~---- 252 (325)
T 1ibq_A 191 GFSTDGYSIGDGSSSS----------SGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ---ESYEAG-GYVFSCST---- 252 (325)
T ss_dssp EEEECEEEETTSCCBS----------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCB---CCSSSS-SCEEETTC----
T ss_pred EEEECcEEECCeeccC----------CCceEEEeCCCCcEeCCHHHHHHHHHhCCCce---EcCcCC-eEEEEcCC----
Confidence 9999999999875531 13579999999999999999999988874321 111111 12235762
Q ss_pred CCcccCeEEEEEcCCceEEEEcCCccEEEeCC--ceEEEE-EEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEee
Q 038219 345 GGTTAPEIHLVLPGNNRVWKIYGANSMVRVGK--DAMCLA-FVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFSS 419 (435)
Q Consensus 345 ~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~ 419 (435)
.+|+|+|+|+| ++++||+++|++...+ ...|++ +..... .+.||||+.|||++|+|||++++|||||+
T Consensus 253 ---~~P~i~f~fgg--~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~ 323 (325)
T 1ibq_A 253 ---DLPDFTVVIGD--YKAVVPGKYINYAPVSTGSSTCYGGIQSNSG--LGLSILGDVFLKSQYVVFNSEGPKLGFAA 323 (325)
T ss_dssp ---CCCCEEEEETT--EEEEECHHHHEEEESSTTCSEEEESEEECTT--TCSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred ---CCCcEEEEECC--EEEEECHHHhcccccCCCCCeEEEEEEcCCC--CCceEEChHHhcCEEEEEECCCCEEEeee
Confidence 68999999966 9999999999987643 368997 554432 35799999999999999999999999997
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.9e-51 Score=412.68 Aligned_cols=321 Identities=18% Similarity=0.229 Sum_probs=242.6
Q ss_pred CCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCCCCCCccce
Q 038219 43 STLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGCNNHTCSRF 122 (435)
Q Consensus 43 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 122 (435)
.+.+|+++|.||||+|+++|+|||||+++||+|.+|.. | +..|++. .++++....|.|.
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~-------------~--~~~y~~~------~SsT~~~~~~~~~ 77 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF-------------L--HRYYQRQ------LSSTYRDLRKGVY 77 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTT-------------C--SCCCCGG------GCTTCEEEEEEEE
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcc-------------c--cCCcCcc------cCCCceeCCceEE
Confidence 35689999999999999999999999999999987621 1 1223332 3445566779999
Q ss_pred eecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCC-CCCcceEEeeCCCCC--------
Q 038219 123 PANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGL-ATGVKGMAGLGRTQV-------- 193 (435)
Q Consensus 123 ~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~-~~~~~GIlGLg~~~~-------- 193 (435)
+. |++|++. |.+++|+|+|+. + ..+.+ .+.|++......... ....+||||||++.+
T Consensus 78 i~--Yg~Gs~~-G~~~~Dtv~ig~-----g-----~~~~~-~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~ 143 (395)
T 2qp8_A 78 VP--YTQGKWE-GELGTDLVSIPH-----G-----PNVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLE 143 (395)
T ss_dssp EE--CSSCEEE-EEEEEEEEECTT-----S-----CSCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSC
T ss_pred EE--ECCcEEE-EEEEeEEEEECC-----C-----CCceE-EEEEEEEEccCcccccccCccceEEcCchhhccCCCCCC
Confidence 99 8999887 999999999942 1 00122 256777654321111 246799999998764
Q ss_pred chhhhhhhccCCCCceEEecCCC----------CCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcc
Q 038219 194 SLPSQFSAAFNFDRKFSICLSSS----------TTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTD 263 (435)
Q Consensus 194 s~~~ql~~~~~i~~~FS~~L~~~----------~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~ 263 (435)
+++.+|.+++.++++||+||.+. ....|.|+|||+|+ .++.|++.|+|+.. ..+
T Consensus 144 ~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~ 207 (395)
T 2qp8_A 144 PFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDH--SLYTGSLWYTPIRR--------------EWY 207 (395)
T ss_dssp CHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCG--GGEEEEEEEEECCS--------------BTT
T ss_pred CHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCc--ccccCceEEeccCC--------------Cce
Confidence 35668999998888899999753 13579999999997 67889999999974 368
Q ss_pred eEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCC---CCCccccee
Q 038219 264 YFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKP---IAPFGACFN 340 (435)
Q Consensus 264 y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~---~~~~~~C~~ 340 (435)
|.|.+++|+|+++.+.++...+. ...+||||||++++||+++|++|.+++.+... ..+... ......|+.
T Consensus 208 ~~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~~~C~~ 280 (395)
T 2qp8_A 208 YEVIIVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS--TEKFPDGFWLGEQLVCWQ 280 (395)
T ss_dssp BBCCEEEEEETTEECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT--TSCCCHHHHTTCSCEEES
T ss_pred EEEEEEEEEECCEEcccCccccC-----CceEEEEcCCCcEecCHHHHHHHHHHHhhhcc--cccCCccccccccccccc
Confidence 99999999999998876544332 25799999999999999999999999988754 111110 012357987
Q ss_pred ccCCCCcccCeEEEEEcCCc----eEEEEcCCccEEEeCC----ceEEEE--EEeCCCCCCCeeeechhhhcccEEEEeC
Q 038219 341 SSFIGGTTAPEIHLVLPGNN----RVWKIYGANSMVRVGK----DAMCLA--FVDGGVNPRTSVVIGGYQLEDNLLEFNL 410 (435)
Q Consensus 341 ~~~~~~~~~P~i~~~f~g~~----~~~~ip~~~y~~~~~~----~~~C~~--~~~~~~~~~~~~ILG~~flr~~yvvfD~ 410 (435)
........+|+|+|+|+|+. ++|+|+|++|+++..+ ...|++ +... ...||||+.|||++|+|||+
T Consensus 281 ~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~yvvfD~ 356 (395)
T 2qp8_A 281 AGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS----STGTVMGAVIMEGFYVVFDR 356 (395)
T ss_dssp TTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE----SSCEEECHHHHTTEEEEEET
T ss_pred cccchHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC----CCcEEEChHHhCCeeEEEEC
Confidence 65433346999999999831 4799999999998653 348974 3332 24699999999999999999
Q ss_pred CCCEEEEeecCCcccCCccCc
Q 038219 411 AKSRLGFSSSLLSWQTTCSKL 431 (435)
Q Consensus 411 ~~~rIGfa~~~~~~~~~C~~~ 431 (435)
+++|||||+ ..|.+.
T Consensus 357 ~~~rIGfA~------~~c~~~ 371 (395)
T 2qp8_A 357 ARKRIGFAV------SACHVH 371 (395)
T ss_dssp TTTEEEEEE------ETTCCC
T ss_pred CCCEEEEEe------ccCCCC
Confidence 999999997 677753
No 31
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=6.4e-51 Score=415.80 Aligned_cols=323 Identities=18% Similarity=0.223 Sum_probs=247.6
Q ss_pred CceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCCCCCCcccee
Q 038219 44 TLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGCNNHTCSRFP 123 (435)
Q Consensus 44 ~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 123 (435)
+..|+++|+||||||+++|+|||||+++||+|.+| |..+..|++. .++++....|.|.+
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c---------------c~~~~~y~~~------~SsT~~~~~~~~~i 131 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH---------------PFLHRYYQRQ------LSSTYRDLRKGVYV 131 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC---------------TTCSCCCCGG------GCTTCEEEEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc---------------cccCCcccCC------CCCCcccCCccEEE
Confidence 45899999999999999999999999999999765 2223344432 34455667899999
Q ss_pred ecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCC-CCCcceEEeeCCCCC--------c
Q 038219 124 ANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGL-ATGVKGMAGLGRTQV--------S 194 (435)
Q Consensus 124 ~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~-~~~~~GIlGLg~~~~--------s 194 (435)
. |++|++. |.+++|+|+|++. . .+.+ .+.|+|+........ ....+||||||++.+ +
T Consensus 132 ~--Yg~Gs~~-G~~~~Dtv~ig~~----~------~~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~ 197 (455)
T 3lpj_A 132 P--YTQGKWE-GELGTDLVSIPHG----P------NVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEP 197 (455)
T ss_dssp E--CSSCEEE-EEEEEEEEECTTS----C------SCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCC
T ss_pred E--eCCeEEE-EEEEEEEEEECCC----c------ceee-EEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCc
Confidence 9 8999987 9999999999521 0 1222 357888766532221 246799999998654 4
Q ss_pred hhhhhhhccCCCCceEEecCCC----------CCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcce
Q 038219 195 LPSQFSAAFNFDRKFSICLSSS----------TTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDY 264 (435)
Q Consensus 195 ~~~ql~~~~~i~~~FS~~L~~~----------~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y 264 (435)
++.+|.+++.++++||+||.+. ....|.|+|||+|+ .++.|++.|+|+.. ..+|
T Consensus 198 ~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~w 261 (455)
T 3lpj_A 198 FFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDH--SLYTGSLWYTPIRR--------------EWYY 261 (455)
T ss_dssp HHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCG--GGEEEEEEEEECCS--------------BTTB
T ss_pred HHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCc--ccccCceEEEecCC--------------Ccee
Confidence 6778999999988899999753 24589999999997 78889999999975 3689
Q ss_pred EEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCC---CCCcccceec
Q 038219 265 FIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKP---IAPFGACFNS 341 (435)
Q Consensus 265 ~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~---~~~~~~C~~~ 341 (435)
.|.+++|+|+++.+.++...+. ...+||||||++++||+++|++|.++|.+... ..+... ......|+..
T Consensus 262 ~v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~--~~~~~~~~~~g~~~~C~~~ 334 (455)
T 3lpj_A 262 EVIIVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS--TEKFPDGFWLGEQLVCWQA 334 (455)
T ss_dssp BCCEEEEEETTEECCCCGGGGG-----SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTT--TSCCCHHHHTTCSCEEEST
T ss_pred EEEEeEEEECCEEccccccccC-----CCeEEEECCCcceeCCHHHHHHHHHHhhhhcc--ccccCcccccCcceecccc
Confidence 9999999999998876543321 36799999999999999999999999998753 111111 1224679887
Q ss_pred cCCCCcccCeEEEEEcCC----ceEEEEcCCccEEEeCCc----eEEEEEEeCCCCCCCeeeechhhhcccEEEEeCCCC
Q 038219 342 SFIGGTTAPEIHLVLPGN----NRVWKIYGANSMVRVGKD----AMCLAFVDGGVNPRTSVVIGGYQLEDNLLEFNLAKS 413 (435)
Q Consensus 342 ~~~~~~~~P~i~~~f~g~----~~~~~ip~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~ 413 (435)
.......+|+|+|+|+|. .++|+||+++|+++..+. ..|+++..... .+.||||+.|||++|+|||++++
T Consensus 335 ~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~--~~~~ILG~~fl~~~yvvfD~~~~ 412 (455)
T 3lpj_A 335 GTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS--STGTVMGAVIMEGFYVVFDRARK 412 (455)
T ss_dssp TCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE--SSCEEECHHHHTTEEEEEETTTT
T ss_pred cCCchhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCC--CCcEEEChHHhCCeEEEEECCCC
Confidence 644334699999999983 136999999999987642 58997422111 24799999999999999999999
Q ss_pred EEEEeecCCcccCCccCcc
Q 038219 414 RLGFSSSLLSWQTTCSKLT 432 (435)
Q Consensus 414 rIGfa~~~~~~~~~C~~~~ 432 (435)
|||||+ ++|++..
T Consensus 413 rIGfA~------~~c~~~~ 425 (455)
T 3lpj_A 413 RIGFAV------SACHVHD 425 (455)
T ss_dssp EEEEEE------ETTCCCC
T ss_pred EEEEEe------ccccccc
Confidence 999996 7776654
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.7e-51 Score=400.47 Aligned_cols=297 Identities=16% Similarity=0.155 Sum_probs=230.1
Q ss_pred CCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCCCCCCccce
Q 038219 43 STLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGCNNHTCSRF 122 (435)
Q Consensus 43 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 122 (435)
.+.+|+++|.|| ||+++|+|||||+++||+|.+| .+..|..+..|++. .++ +..+.|.|.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C-----------~~~~c~~~~~y~~~------~Ss-~~~~~~~~~ 72 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQT-----------PSSERSGHDYYTPG------SSA-QKIDGATWS 72 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTS-----------CHHHHTTCCCBCCC------TTC-EEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCC-----------CcccccCCCCCCcc------ccC-CccCCCeEE
Confidence 567999999999 7999999999999999999875 33346555555542 222 344578999
Q ss_pred eecccCCcc-ceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCC-CCCcceEEeeCCCCCc------
Q 038219 123 PANSISRES-TNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGL-ATGVKGMAGLGRTQVS------ 194 (435)
Q Consensus 123 ~~y~y~~g~-~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~-~~~~~GIlGLg~~~~s------ 194 (435)
+. |++|+ +. |.+++|+|+|+ + +.++++.|||++....... ....+||||||++.++
T Consensus 73 i~--Yg~Gs~~~-G~~~~D~v~ig------~-------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~ 136 (323)
T 1izd_A 73 IS--YGDGSSAS-GDVYKDKVTVG------G-------VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTP 136 (323)
T ss_dssp EE--CTTSCEEE-EEEEEEEEEET------T-------EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSC
T ss_pred EE--cCCCCeEE-EEEEEEEEEEC------C-------EEECceEEEEEEeccccccccCCCceEEecCcccccccCCCC
Confidence 99 88888 56 99999999994 3 4788999999987632111 1357999999997544
Q ss_pred ---hhhhhhhccCCCCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcceEEEEeEE
Q 038219 195 ---LPSQFSAAFNFDRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDYFIEIKSI 271 (435)
Q Consensus 195 ---~~~ql~~~~~i~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y~v~l~~i 271 (435)
+..+|.++ .-+++||+||.+. ..|.|+|||+|+ .++.|++.|+|++.. ..+|.|.+++|
T Consensus 137 ~~~~~~~l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~~w~v~l~~i 198 (323)
T 1izd_A 137 QKTFFDNVKSS-LSEPIFAVALKHN--APGVYDFGYTDS--SKYTGSITYTDVDNS-------------QGFWGFTADGY 198 (323)
T ss_dssp CCCHHHHHGGG-SSSSEEEEECCTT--SCEEEEESSCCT--TSEEEEEEEEECBCT-------------TSSCEEEESEE
T ss_pred CCCHHHHHHHh-ccCcEEEEEccCC--CCCEEEECCcCc--cccccceEEEECCCC-------------CceEEEEECeE
Confidence 45777765 3358899999874 589999999997 678899999999743 47899999999
Q ss_pred EECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceeccCCCCcccCe
Q 038219 272 LIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSSFIGGTTAPE 351 (435)
Q Consensus 272 ~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ 351 (435)
+|++ .+. . ....+||||||++++||+++|++|.+++.+.. +..... ....+|+. .+|+
T Consensus 199 ~v~~-~~~--~--------~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~---~~~~~g-~~~~~C~~-------~~P~ 256 (323)
T 1izd_A 199 SIGS-DSS--S--------DSITGIADTGTTLLLLDDSIVDAYYEQVNGAS---YDSSQG-GYVFPSSA-------SLPD 256 (323)
T ss_dssp EETT-EEE--C--------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCE---EETTTT-EEEEETTC-------CCCC
T ss_pred EECC-ccc--C--------CCceEEEeCCCcceeCCHHHHHHHHHhCCCcE---EcCcCC-EEEEECCC-------CCce
Confidence 9999 442 1 13579999999999999999999988874221 110111 11234652 6899
Q ss_pred EEEEEcCCceEEEEcCCccEEEeCCceEEEE-EEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEee
Q 038219 352 IHLVLPGNNRVWKIYGANSMVRVGKDAMCLA-FVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFSS 419 (435)
Q Consensus 352 i~~~f~g~~~~~~ip~~~y~~~~~~~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~ 419 (435)
|+|+|+| ++|+||+++|++...++..|++ +..... .+.||||+.|||++|+|||++++|||||+
T Consensus 257 i~f~fgg--~~~~i~~~~~~~~~~~~~~C~~~i~~~~~--~~~~IlG~~fl~~~y~vfD~~~~riGfA~ 321 (323)
T 1izd_A 257 FSVTIGD--YTATVPGEYISFADVGNGQTFGGIQSNSG--IGFSIFGDVFLKSQYVVFDASGPRLGFAA 321 (323)
T ss_dssp EEEEETT--EEEEECHHHHEEEECSTTEEEESEEECTT--TSSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred EEEEECC--EEEecCHHHeEEecCCCCeEEEEEEcCCC--CCcEEEChHHhcCEEEEEECCCCEEEEee
Confidence 9999965 9999999999988755678997 655432 35799999999999999999999999997
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=4.8e-51 Score=398.83 Aligned_cols=296 Identities=16% Similarity=0.172 Sum_probs=228.2
Q ss_pred CCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCCCCCCccce
Q 038219 43 STLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGCNNHTCSRF 122 (435)
Q Consensus 43 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 122 (435)
.+.+|+++|+|| ||+++|+|||||+++||+|.+| .+..|..+..|++. .++ +....|.|.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~c~~~~~y~~~------~Ss-~~~~~~~~~ 72 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTEL-----------PASQQSGHSVYNPS------ATG-KELSGYTWS 72 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTS-----------CHHHHTTSCCBCHH------HHC-EEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCC-----------CchhccCCCCCCcc------cCC-cccCCCeEE
Confidence 567999999999 7999999999999999999875 23345555555542 111 333578999
Q ss_pred eecccCCcc-ceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCCCCC-CCcceEEeeCCCCCc------
Q 038219 123 PANSISRES-TNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLDGLA-TGVKGMAGLGRTQVS------ 194 (435)
Q Consensus 123 ~~y~y~~g~-~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~~~~-~~~~GIlGLg~~~~s------ 194 (435)
+. |++|+ +. |.+++|+|+|+ + +.++++.|||++........ ...+||||||++..+
T Consensus 73 i~--Yg~Gs~~~-G~~~~D~v~ig------~-------~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 136 (323)
T 1bxo_A 73 IS--YGDGSSAS-GNVFTDSVTVG------G-------VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQS 136 (323)
T ss_dssp EE--CTTSCEEE-EEEEEEEEEET------T-------EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSC
T ss_pred EE--eCCCCeEE-EEEEEEEEEEC------C-------EEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCC
Confidence 99 88888 56 99999999994 3 47889999999875221111 357999999986543
Q ss_pred ---hhhhhhhccCCCCceEEecCCCCCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcceEEEEeEE
Q 038219 195 ---LPSQFSAAFNFDRKFSICLSSSTTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDYFIEIKSI 271 (435)
Q Consensus 195 ---~~~ql~~~~~i~~~FS~~L~~~~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y~v~l~~i 271 (435)
+..+|.++ .-+++||+||.+. ..|.|+|||+|+ .++.|++.|+|++.. ..+|.|.+++|
T Consensus 137 ~~~~~~~l~~~-i~~~~FS~~L~~~--~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~~w~v~l~~i 198 (323)
T 1bxo_A 137 QTTFFDTVKSS-LAQPLFAVALKHQ--QPGVYDFGFIDS--SKYTGSLTYTGVDNS-------------QGFWSFNVDSY 198 (323)
T ss_dssp CCCHHHHHGGG-BSSSEEEEECCSS--SCEEEEESSCCG--GGBSSCCEEEECBCT-------------TSSCEEEEEEE
T ss_pred CCCHHHHHHHh-cCCcEEEEEEeCC--CCceEEEeCcCh--hhccCceEEEECCCC-------------CCeEEEEEeeE
Confidence 56777765 3358899999874 589999999997 788999999999753 46899999999
Q ss_pred EECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHHHHhhcCCCCCCCCCCcccceeccCCCCcccCe
Q 038219 272 LIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFSKALLFNIPRVKPIAPFGACFNSSFIGGTTAPE 351 (435)
Q Consensus 272 ~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ 351 (435)
+|++ ... . ...+||||||++++||+++|++|.+++..... ..... .....|+. .+|+
T Consensus 199 ~v~~-~~~---~--------~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~---~~~~g-~~~~~C~~-------~~P~ 255 (323)
T 1bxo_A 199 TAGS-QSG---D--------GFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ---DSNAG-GYVFDCST-------NLPD 255 (323)
T ss_dssp EETT-EEE---E--------EEEEEECTTCSSEEECHHHHHHHHTTSTTCEE---ETTTT-EEEECTTC-------CCCC
T ss_pred EECC-ccC---C--------CceEEEeCCCCceeCCHHHHHHHHHhCCCceE---cCcCC-EEEEECCC-------CCce
Confidence 9998 211 1 25799999999999999999999888743211 11111 11235762 6899
Q ss_pred EEEEEcCCceEEEEcCCccEEEeCC-ceEEEE-EEeCCCCCCCeeeechhhhcccEEEEeCCCCEEEEee
Q 038219 352 IHLVLPGNNRVWKIYGANSMVRVGK-DAMCLA-FVDGGVNPRTSVVIGGYQLEDNLLEFNLAKSRLGFSS 419 (435)
Q Consensus 352 i~~~f~g~~~~~~ip~~~y~~~~~~-~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvfD~~~~rIGfa~ 419 (435)
|+|+|+| ++++||+++|++...+ +..|++ +..... .+.||||++|||++|+|||++|+|||||+
T Consensus 256 i~f~fgg--~~~~l~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~ILG~~fl~~~y~vfD~~~~riGfA~ 321 (323)
T 1bxo_A 256 FSVSISG--YTATVPGSLINYGPSGDGSTCLGGIQSNSG--IGFSIFGDIFLKSQYVVFDSDGPQLGFAP 321 (323)
T ss_dssp EEEEETT--EEEEECHHHHEEEECSSSSCEEESEEECTT--CSSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred EEEEECC--EEEEECHHHeEEeccCCCCeEEEEEECCCC--CCcEEEChHHHcCEEEEEECCCCEEEEec
Confidence 9999966 9999999999987643 368997 555432 35799999999999999999999999997
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.8e-40 Score=308.81 Aligned_cols=228 Identities=17% Similarity=0.203 Sum_probs=184.3
Q ss_pred EEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCCC
Q 038219 35 ALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPGC 114 (435)
Q Consensus 35 ~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~c 114 (435)
.+||.+ ..+.+|+++|.||||||++.|+|||||+++||+|..|.. +..|..+..|++. .++++
T Consensus 4 ~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~----------~~~C~~~~~y~~~------~SsT~ 66 (239)
T 1b5f_A 4 VVALTN-DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCIN----------SKACRAHSMYESS------DSSTY 66 (239)
T ss_dssp EEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCS----------CHHHHTSCCBCGG------GCTTC
T ss_pred eeeeee-cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCC----------CcccCCCCCCCCc------cCCCe
Confidence 478876 467899999999999999999999999999999987621 2457665566653 34556
Q ss_pred CCCCccceeecccCCccceeeeEEEEEEEeeeeccCCCCCCCCcccccCceEEecccCCcCC-CCCCCcceEEeeCCCCC
Q 038219 115 NNHTCSRFPANSISRESTNRGELATDVVSIQSIDIDGKANPPGQFVSVPNLIFSCGPTFLLD-GLATGVKGMAGLGRTQV 193 (435)
Q Consensus 115 ~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~~~~~~G~~~~~~~~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~ 193 (435)
....|.|.+. |++|++. |.+++|+|+++ + +.++++.|||++..... +.....+||||||++.+
T Consensus 67 ~~~~~~~~i~--Yg~Gs~~-G~~~~D~v~~g------~-------~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~ 130 (239)
T 1b5f_A 67 KENGTFGAII--YGTGSIT-GFFSQDSVTIG------D-------LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTI 130 (239)
T ss_dssp EEEEEEEEEE--CSSCEEE-EEEEEEEEEET------T-------EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSS
T ss_pred eeCCcEEEEE--ECCCcEE-EEEEEEEEEEC------C-------cEEccEEEEEEEeccCccccccCcceEEecCcccc
Confidence 6677899999 8888877 99999999994 3 47889999999875211 12346799999999887
Q ss_pred c--hhhhhhhccCC-CCceEEecCCC--CCCCceEEEcCCCCCCcCCCCCceEeeCccCCCCCCCcccCCCCCcceEEEE
Q 038219 194 S--LPSQFSAAFNF-DRKFSICLSSS--TTSNGAVFFGDVPFPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDYFIEI 268 (435)
Q Consensus 194 s--~~~ql~~~~~i-~~~FS~~L~~~--~~~~G~l~fGg~d~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y~v~l 268 (435)
+ +..+|.+++.+ +++||+||.+. ....|+|+|||+|+ .++.|++.|+|+.. ..+|.|.+
T Consensus 131 s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~~v~l 194 (239)
T 1b5f_A 131 SVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDP--NHFRGDHTYVPVTY--------------QYYWQFGI 194 (239)
T ss_dssp SCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCG--GGEEEEEEEEEEEE--------------ETTEEEEE
T ss_pred ccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcCh--hhccCceEEEEccc--------------CCeEEEEe
Confidence 6 45678888888 47899999885 24579999999997 67889999999975 36899999
Q ss_pred eEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHHHHHHHHHH
Q 038219 269 KSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIYKAFIETFS 319 (435)
Q Consensus 269 ~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y~~l~~~i~ 319 (435)
++|+|+++.+.+... ...+||||||++++||+++|++|.++|.
T Consensus 195 ~~i~v~~~~~~~~~~--------~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 195 GDVLIGDKSTGFCAP--------GCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp CCEEETTEECCTTTT--------CEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred eEEEECCEEecccCC--------CCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 999999987764321 3579999999999999999999988874
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=2.3e-37 Score=289.58 Aligned_cols=223 Identities=17% Similarity=0.249 Sum_probs=175.8
Q ss_pred cccCceEEecccCCcCCC-CCCCcceEEeeCCCCCc------hhhhhhhccCC-CCceEEecCCCCCC--CceEEEcCCC
Q 038219 160 VSVPNLIFSCGPTFLLDG-LATGVKGMAGLGRTQVS------LPSQFSAAFNF-DRKFSICLSSSTTS--NGAVFFGDVP 229 (435)
Q Consensus 160 ~~~~~~~FG~~~~~~~~~-~~~~~~GIlGLg~~~~s------~~~ql~~~~~i-~~~FS~~L~~~~~~--~G~l~fGg~d 229 (435)
+++++++|||++...... .....+||||||++..+ ++.+|.+++.+ +++||+||.+.... .|+|+|||+|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 478899999998864322 23468999999997643 66789999888 57899999986333 8999999999
Q ss_pred CCCcCCCCCceEeeCccCCCCCCCcccCCCCCcceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHH
Q 038219 230 FPNIDVSKSLIYTPLILNPVHNEGLAFKGDPSTDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETS 309 (435)
Q Consensus 230 ~~~~~~~g~~~~~Pl~~~~~~~~~~~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~ 309 (435)
+ .++.|++.|+|+.. ..+|.|.+++|+|+++.+... ....+||||||+++++|++
T Consensus 83 ~--~~~~g~l~~~p~~~--------------~~~~~v~l~~i~v~~~~~~~~---------~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 83 S--KYYKGSLSYLNVTR--------------KAYWQVHLDQVEVASGLTLCK---------EGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp G--GGEEEEEEEEECSS--------------BTTBEEEEEEEEETTSCEEST---------TCEEEEECTTCSSEEECHH
T ss_pred H--HHcCCceEEEECcc--------------ccEEEEEEeEEEECCeeEecc---------CCCEEEEECCCccccCCHH
Confidence 7 67889999999974 368999999999998764211 1357999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcccceeccCCCCcccCeEEEEEcCCceEEEEcCCccEEEeCC--ceEEEE-EEeC
Q 038219 310 IYKAFIETFSKALLFNIPRVKPIAPFGACFNSSFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGK--DAMCLA-FVDG 386 (435)
Q Consensus 310 ~y~~l~~~i~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~--~~~C~~-~~~~ 386 (435)
+|++|.+++.+... ........|+... .+|+|+|+|+| ++++||+++|+++..+ +..|+. +...
T Consensus 138 ~~~~l~~~~~~~~~------~~g~~~~~C~~~~-----~~p~i~f~f~g--~~~~l~~~~y~~~~~~~~~~~C~~~~~~~ 204 (241)
T 1lya_B 138 EVRELQKAIGAVPL------IQGEYMIPCEKVS-----TLPAITLKLGG--KGYKLSPEDYTLKVSQAGKTLCLSGFMGM 204 (241)
T ss_dssp HHHHHHHHHTCEEE------ETTEEEEEGGGGG-----GSCCEEEEETT--EEEEECTTTSEEEETTTTSSEEEESEEEC
T ss_pred HHHHHHHHhCCeec------cCCcEEEECCCCc-----cCCeEEEEECC--EEEEECHHHhEEEccCCCCCeeEEEEEec
Confidence 99999988753321 1111234576543 68999999976 9999999999998763 468995 7654
Q ss_pred CCC--CCCeeeechhhhcccEEEEeCCCCEEEEeec
Q 038219 387 GVN--PRTSVVIGGYQLEDNLLEFNLAKSRLGFSSS 420 (435)
Q Consensus 387 ~~~--~~~~~ILG~~flr~~yvvfD~~~~rIGfa~~ 420 (435)
+.. ..+.||||++|||++|+|||++++|||||+.
T Consensus 205 ~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~ 240 (241)
T 1lya_B 205 DIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEA 240 (241)
T ss_dssp CCCTTTCCCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ccCCCCCCeEEechHHhcceEEEEECCCCEEEEEEc
Confidence 311 2457999999999999999999999999973
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.78 E-value=2.7e-19 Score=141.99 Aligned_cols=93 Identities=19% Similarity=0.203 Sum_probs=74.7
Q ss_pred eEEeEeeCCCCceEEEEEeeCCCCceEEEEEEcCCCceeecCCCCCCCCCcccccCCcccccccccCCCcccCCCCCCCC
Q 038219 34 LALLVSKDSSTLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDCDQGYVSTSYKPARCGSAQCKLARSKSCIDEYSCSPGPG 113 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~Sst~~~~~C~~~~C~~~~~~~~~~~~~~~~~~~ 113 (435)
..+||.. ..+.+|+++|.||||||++.|+|||||+++||+|..|... +..|..+..|++. .+++
T Consensus 3 ~~~~l~n-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~---------~~~C~~~~~y~p~------~SsT 66 (97)
T 1lya_A 3 IPEVLKN-YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLL---------DIACWIHHKYNSD------KSST 66 (97)
T ss_dssp EEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTT---------CHHHHTSCCBCGG------GCTT
T ss_pred ceEeeEE-CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCc---------ccccCCCCCCCch------hCCC
Confidence 3578875 3678999999999999999999999999999999876210 2467666666552 3555
Q ss_pred CCCCCccceeecccCCccceeeeEEEEEEEee
Q 038219 114 CNNHTCSRFPANSISRESTNRGELATDVVSIQ 145 (435)
Q Consensus 114 c~~~~~~~~~~y~y~~g~~~~G~~~~D~v~~~ 145 (435)
+....|.|.+. |++|++. |.+++|+|+|+
T Consensus 67 ~~~~~~~~~i~--Yg~Gs~~-G~~~~Dtv~i~ 95 (97)
T 1lya_A 67 YVKNGTSFDIH--YGSGSLS-GYLSQDTVSVP 95 (97)
T ss_dssp CEEEEEEEEEE--CSSCEEE-EEEEEEEEEES
T ss_pred ceeCCCcEEEE--ECCcEEE-EEEEEEEEEEC
Confidence 66778999999 8999977 99999999995
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.62 E-value=7.5e-16 Score=119.84 Aligned_cols=78 Identities=17% Similarity=0.366 Sum_probs=62.9
Q ss_pred ccceeccCCCCcccCeEEEEEcCCceEEEEcCCccEEEeCC--ceEEEE-EEeCCC-CCCCeeeechhhhcccEEEEeCC
Q 038219 336 GACFNSSFIGGTTAPEIHLVLPGNNRVWKIYGANSMVRVGK--DAMCLA-FVDGGV-NPRTSVVIGGYQLEDNLLEFNLA 411 (435)
Q Consensus 336 ~~C~~~~~~~~~~~P~i~~~f~g~~~~~~ip~~~y~~~~~~--~~~C~~-~~~~~~-~~~~~~ILG~~flr~~yvvfD~~ 411 (435)
.+|...+ .+|+|+|+|+| ++++|+|++|++.... +..|+. ++..+. ...+.||||++|||++|+|||++
T Consensus 5 v~C~~~~-----~~P~i~f~~gg--~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~ 77 (87)
T 1b5f_B 5 VDCNTLS-----SMPNVSFTIGG--KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYG 77 (87)
T ss_dssp ECGGGGG-----GCCCEEEEETT--EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETT
T ss_pred EECCCCC-----cCCcEEEEECC--EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECC
Confidence 3575543 68999999987 8999999999998653 368995 665431 12468999999999999999999
Q ss_pred CCEEEEeec
Q 038219 412 KSRLGFSSS 420 (435)
Q Consensus 412 ~~rIGfa~~ 420 (435)
++|||||+.
T Consensus 78 ~~riGfA~~ 86 (87)
T 1b5f_B 78 NLLVGFAEA 86 (87)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEc
Confidence 999999973
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.75 E-value=0.21 Score=41.57 Aligned_cols=25 Identities=28% Similarity=0.329 Sum_probs=23.8
Q ss_pred eeechhhhcccEEEEeCCCCEEEEe
Q 038219 394 VVIGGYQLEDNLLEFNLAKSRLGFS 418 (435)
Q Consensus 394 ~ILG~~flr~~yvvfD~~~~rIGfa 418 (435)
.|||..||+++-+..|+++++|-|.
T Consensus 110 ~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 110 VLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp EEECHHHHHHTTCEEETTTTEEEET
T ss_pred eEecHHHHhhCCEEEECCCCEEEEc
Confidence 6999999999999999999999986
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=92.87 E-value=0.36 Score=40.33 Aligned_cols=26 Identities=19% Similarity=0.252 Sum_probs=24.1
Q ss_pred eeechhhhcccEEEEeCCCCEEEEee
Q 038219 394 VVIGGYQLEDNLLEFNLAKSRLGFSS 419 (435)
Q Consensus 394 ~ILG~~flr~~yvvfD~~~~rIGfa~ 419 (435)
.|||..||+++-.+.|++++++-|..
T Consensus 109 ~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 109 MLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp EEECHHHHHHTTCEEETTTTEEECTT
T ss_pred eeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 69999999999999999999998864
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=82.48 E-value=1.2 Score=34.35 Aligned_cols=26 Identities=23% Similarity=0.143 Sum_probs=23.3
Q ss_pred EEEEeeCCCCceEEEEEEcCCCceeecC
Q 038219 48 LTQIKQRTPLVPVKLTLDLGGQFLWVDC 75 (435)
Q Consensus 48 ~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~ 75 (435)
++.|+||. |.+++++|||.+++-+.-
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEE 35 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESC
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEec
Confidence 57899998 999999999999998863
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=82.24 E-value=1.1 Score=34.80 Aligned_cols=26 Identities=19% Similarity=0.215 Sum_probs=23.1
Q ss_pred EEEEEeeCCCCceEEEEEEcCCCceeec
Q 038219 47 YLTQIKQRTPLVPVKLTLDLGGQFLWVD 74 (435)
Q Consensus 47 Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~ 74 (435)
-++.|+||. |.+.+++|||++++-+.
T Consensus 9 P~v~v~I~G--q~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIND--TPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEc
Confidence 367899998 99999999999999885
No 42
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=79.55 E-value=1.4 Score=36.32 Aligned_cols=30 Identities=23% Similarity=0.253 Sum_probs=26.4
Q ss_pred CCceEEEEEeeCCCCceEEEEEEcCCCceeec
Q 038219 43 STLQYLTQIKQRTPLVPVKLTLDLGGQFLWVD 74 (435)
Q Consensus 43 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~ 74 (435)
..+.+++++.|+. +++++++|||++.+-+.
T Consensus 23 ~~~~~~v~v~InG--~~~~~LvDTGAs~s~is 52 (148)
T 2i1a_A 23 QVPMLYINIEINN--YPVKAFVDTGAQTTIMS 52 (148)
T ss_dssp CCCCCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred ccceEEEEEEECC--EEEEEEEECCCCccccC
Confidence 4678899999997 89999999999988775
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=77.42 E-value=2.1 Score=32.91 Aligned_cols=25 Identities=24% Similarity=0.236 Sum_probs=22.9
Q ss_pred EEEEeeCCCCceEEEEEEcCCCceeec
Q 038219 48 LTQIKQRTPLVPVKLTLDLGGQFLWVD 74 (435)
Q Consensus 48 ~~~i~iGtP~Q~~~v~~DTGSs~~Wv~ 74 (435)
++.|+||. |.+..++|||.+++-+.
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVA 34 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEES
T ss_pred eEEEEECC--EEEEEEEecCCCceEEc
Confidence 67899998 99999999999999885
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=75.75 E-value=2.2 Score=33.54 Aligned_cols=28 Identities=11% Similarity=0.172 Sum_probs=23.6
Q ss_pred EEEEeeC---CCCceEEEEEEcCCCceeecC
Q 038219 48 LTQIKQR---TPLVPVKLTLDLGGQFLWVDC 75 (435)
Q Consensus 48 ~~~i~iG---tP~Q~~~v~~DTGSs~~Wv~~ 75 (435)
.+.|+|| +|+|.+..++|||.+++-+.-
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~ 42 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPI 42 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEec
Confidence 5667776 788999999999999999863
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=71.86 E-value=2.9 Score=34.66 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=26.0
Q ss_pred CCceEEEEEeeCCCCceEEEEEEcCCCceeec
Q 038219 43 STLQYLTQIKQRTPLVPVKLTLDLGGQFLWVD 74 (435)
Q Consensus 43 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~ 74 (435)
....|++++.|.. +++++++|||++.+.+.
T Consensus 21 ~~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is 50 (148)
T 3s8i_A 21 QVTMLYINCKVNG--HPLKAFVDSGAQMTIMS 50 (148)
T ss_dssp -CCCCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred ccCEEEEEEEECC--EEEEEEEeCCCCcEeeC
Confidence 3567899999987 99999999999998885
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=71.83 E-value=3 Score=33.01 Aligned_cols=25 Identities=24% Similarity=0.364 Sum_probs=22.0
Q ss_pred EEEEEeeCCCCceEEEEEEcCCCceeec
Q 038219 47 YLTQIKQRTPLVPVKLTLDLGGQFLWVD 74 (435)
Q Consensus 47 Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~ 74 (435)
=++ |+||. |.++.++|||.+++-+.
T Consensus 15 P~v-ikI~G--q~~eaLLDTGAD~TVi~ 39 (116)
T 2hah_A 15 EIL-IFVNG--YPIKFLLDTGADITVLN 39 (116)
T ss_dssp EEE-EEETT--EEEEEEECTTCSSCEEE
T ss_pred CEE-EEECC--EEEEEEecCCCCcEEEc
Confidence 355 99997 99999999999999875
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=66.15 E-value=5.3 Score=31.45 Aligned_cols=25 Identities=4% Similarity=-0.041 Sum_probs=22.7
Q ss_pred EEEEeeCCCCceEEEEEEcCCCceeec
Q 038219 48 LTQIKQRTPLVPVKLTLDLGGQFLWVD 74 (435)
Q Consensus 48 ~~~i~iGtP~Q~~~v~~DTGSs~~Wv~ 74 (435)
.+.++||. |.+..++|||.+++-+.
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~ 35 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIK 35 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred eEEEEECC--EEEEEEEccCCCceEEe
Confidence 57799998 99999999999999885
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=56.55 E-value=9.5 Score=30.88 Aligned_cols=30 Identities=20% Similarity=0.179 Sum_probs=25.4
Q ss_pred CceEEEEEeeCCCCceEEEEEEcCCCceeecC
Q 038219 44 TLQYLTQIKQRTPLVPVKLTLDLGGQFLWVDC 75 (435)
Q Consensus 44 ~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~ 75 (435)
...-++.++|+. |.+..++|||.+++-+.-
T Consensus 20 ~~RP~v~i~I~G--~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 20 PPEPRITLKVGG--QPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp CCSSEEEEEETT--EEEEEEECTTCSSCEECS
T ss_pred cCCCEEEEEECC--EEEEEEEeCCCCeEEEcc
Confidence 345578899998 999999999999998864
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=49.83 E-value=13 Score=32.44 Aligned_cols=26 Identities=19% Similarity=0.125 Sum_probs=23.2
Q ss_pred EEEEEeeCCCCceEEEEEEcCCCceeec
Q 038219 47 YLTQIKQRTPLVPVKLTLDLGGQFLWVD 74 (435)
Q Consensus 47 Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~ 74 (435)
-.+.|+||. |.+..++|||.+++-+.
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIE 34 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEe
Confidence 367899999 99999999999999885
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=47.97 E-value=12 Score=29.80 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=17.9
Q ss_pred eCCCCceEEEEEEcCCCceeecC
Q 038219 53 QRTPLVPVKLTLDLGGQFLWVDC 75 (435)
Q Consensus 53 iGtP~Q~~~v~~DTGSs~~Wv~~ 75 (435)
||. |.+..++|||.+++-+.-
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISE 47 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEET
T ss_pred CCC--EEEEEEecCCCCcEEEec
Confidence 665 788999999999998864
No 51
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=44.52 E-value=24 Score=32.95 Aligned_cols=44 Identities=14% Similarity=-0.013 Sum_probs=31.4
Q ss_pred CcceEEeEeeCCCCceEEEE---EeeCC---CCceEEEEEEcCCCceeecCC
Q 038219 31 PKALALLVSKDSSTLQYLTQ---IKQRT---PLVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 31 ~~~~~~pl~~~~~~~~Y~~~---i~iGt---P~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
....-+|+.. ....|.++ |.||. +.+...++||||++++++|..
T Consensus 181 g~l~~~p~~~--~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 181 GPVAYTPVDN--SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp SCEEEEECBC--TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred cceEEEEccC--CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 3445677764 24567766 67876 246789999999999999843
No 52
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=42.47 E-value=30 Score=30.60 Aligned_cols=39 Identities=10% Similarity=-0.060 Sum_probs=28.0
Q ss_pred eEEeEeeCCCCceEEEE---EeeCCC-----CceEEEEEEcCCCceeecC
Q 038219 34 LALLVSKDSSTLQYLTQ---IKQRTP-----LVPVKLTLDLGGQFLWVDC 75 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~---i~iGtP-----~Q~~~v~~DTGSs~~Wv~~ 75 (435)
.-+|+.. ...|.++ |.||.- .....++||||++++++|.
T Consensus 180 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 180 TYVPVTY---QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp EEEEEEE---ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred EEEEccc---CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 4566654 2467665 678762 3467899999999999984
No 53
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=40.20 E-value=23 Score=33.01 Aligned_cols=44 Identities=14% Similarity=0.052 Sum_probs=30.7
Q ss_pred CcceEEeEeeCCCCceEEEE---EeeCCC--CceEEEEEEcCCCceeecCC
Q 038219 31 PKALALLVSKDSSTLQYLTQ---IKQRTP--LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 31 ~~~~~~pl~~~~~~~~Y~~~---i~iGtP--~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
....-+|+.. ....|.++ |.||.+ .....++||||++++++|..
T Consensus 181 g~l~~~p~~~--~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 181 GSLTTVPIDN--SRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp SCCEEEECBC--TTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred CceEEEEccC--CCCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 3455677754 23566655 678862 35678999999999999854
No 54
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=39.77 E-value=30 Score=30.49 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=27.0
Q ss_pred eEEeEeeCCCCceEEE---EEeeCCC----CceEEEEEEcCCCceeecCC
Q 038219 34 LALLVSKDSSTLQYLT---QIKQRTP----LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~---~i~iGtP----~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
.-+|+.. ...|.+ .|.||.- .....+++|||++++++|..
T Consensus 91 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 91 SYLNVTR---KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp EEEECSS---BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred EEEECcc---ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 3445543 345655 4678762 35578999999999999853
No 55
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=39.39 E-value=30 Score=32.22 Aligned_cols=43 Identities=9% Similarity=-0.097 Sum_probs=30.6
Q ss_pred CcceEEeEeeCCCCceEEEE---EeeCCC---CceEEEEEEcCCCceeecC
Q 038219 31 PKALALLVSKDSSTLQYLTQ---IKQRTP---LVPVKLTLDLGGQFLWVDC 75 (435)
Q Consensus 31 ~~~~~~pl~~~~~~~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~Wv~~ 75 (435)
....-+|+.. ....|.++ |.||.- .+...++||||++++++|.
T Consensus 176 g~l~~~p~~~--~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~ 224 (325)
T 1ibq_A 176 GSITYTDADS--SQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDD 224 (325)
T ss_dssp SCCEEEECBC--TTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECH
T ss_pred CceEEEEcCC--CCceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCH
Confidence 3455677764 23567665 678762 3568999999999999984
No 56
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=37.93 E-value=24 Score=32.86 Aligned_cols=41 Identities=15% Similarity=-0.029 Sum_probs=28.4
Q ss_pred ceEEeEeeCCCCceEEEE---EeeCC--CCceEEEEEEcCCCceeecC
Q 038219 33 ALALLVSKDSSTLQYLTQ---IKQRT--PLVPVKLTLDLGGQFLWVDC 75 (435)
Q Consensus 33 ~~~~pl~~~~~~~~Y~~~---i~iGt--P~Q~~~v~~DTGSs~~Wv~~ 75 (435)
..-+|+.. ....|.++ |.||. +.+...+++|||++++++|.
T Consensus 179 l~~~p~~~--~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~ 224 (323)
T 1izd_A 179 ITYTDVDN--SQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDD 224 (323)
T ss_dssp EEEEECBC--TTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECH
T ss_pred eEEEECCC--CCceEEEEECeEEECCcccCCCceEEEeCCCcceeCCH
Confidence 34556653 33567665 56775 23567899999999999984
No 57
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=37.83 E-value=23 Score=27.25 Aligned_cols=34 Identities=21% Similarity=0.142 Sum_probs=25.9
Q ss_pred ceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCHHHH
Q 038219 263 DYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLETSIY 311 (435)
Q Consensus 263 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~~~y 311 (435)
.|+=++..|+|+|+.+. +++|||+--+.+..+..
T Consensus 5 l~~RP~v~v~I~Gq~~e---------------~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 5 LEKRPTTIVLINDTPLN---------------VLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSCEEEHHHH
T ss_pred ccCCCEEEEEECCEEEE---------------EEeccCCCcEEEccccC
Confidence 45555667899998543 78999999999997554
No 58
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=37.71 E-value=26 Score=32.66 Aligned_cols=44 Identities=14% Similarity=-0.060 Sum_probs=30.4
Q ss_pred CcceEEeEeeCCCCceEEEE---EeeCC-CCceEEEEEEcCCCceeecCC
Q 038219 31 PKALALLVSKDSSTLQYLTQ---IKQRT-PLVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 31 ~~~~~~pl~~~~~~~~Y~~~---i~iGt-P~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
....-+|+.. ....|.++ |.||. +.....++||||++++++|..
T Consensus 177 g~l~~~p~~~--~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~ 224 (323)
T 1bxo_A 177 GSLTYTGVDN--SQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDS 224 (323)
T ss_dssp SCCEEEECBC--TTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHH
T ss_pred CceEEEECCC--CCCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHH
Confidence 3455677764 23456665 66775 335678999999999999853
No 59
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=37.48 E-value=23 Score=27.00 Aligned_cols=31 Identities=23% Similarity=0.300 Sum_probs=24.2
Q ss_pred ceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCH
Q 038219 263 DYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLET 308 (435)
Q Consensus 263 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~ 308 (435)
.|+=++..++|+|+.+. +++|||+--+.+.+
T Consensus 5 l~~rP~vtvkI~Gq~~e---------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 5 LWKRPLVTIKIGGQLKE---------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSEEESC
T ss_pred ccCCCEEEEEECCEEEE---------------EEeccCCCcEEEec
Confidence 35556677899998653 78999999999884
No 60
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=35.87 E-value=37 Score=31.66 Aligned_cols=43 Identities=12% Similarity=0.010 Sum_probs=30.4
Q ss_pred CcceEEeEeeCCCCceEEEE---EeeCCC---CceEEEEEEcCCCceeecC
Q 038219 31 PKALALLVSKDSSTLQYLTQ---IKQRTP---LVPVKLTLDLGGQFLWVDC 75 (435)
Q Consensus 31 ~~~~~~pl~~~~~~~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~Wv~~ 75 (435)
....-+|+.. ....|.++ |.||.- .....++||||++++++|.
T Consensus 180 g~l~~~p~~~--~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~ 228 (329)
T 1oew_A 180 GSITYTAVST--KQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPA 228 (329)
T ss_dssp SCCEEEECBC--TTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECH
T ss_pred cceEEEEccC--CCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCH
Confidence 3456677764 23456555 678863 2467899999999999984
No 61
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=33.39 E-value=27 Score=26.62 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=23.8
Q ss_pred ceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeC
Q 038219 263 DYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLE 307 (435)
Q Consensus 263 ~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp 307 (435)
.|+=++..++++|+.+. +++|||+--+.+.
T Consensus 5 l~~RP~vti~I~Gq~~e---------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPVE---------------VLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEEE---------------EEEecCCCceEEc
Confidence 46666777999998654 7899999988885
No 62
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=31.55 E-value=44 Score=32.13 Aligned_cols=43 Identities=5% Similarity=-0.013 Sum_probs=28.3
Q ss_pred cceEEeEeeCCCCceEEEE---EeeCC------CCceE--------EEEEEcCCCceeecC
Q 038219 32 KALALLVSKDSSTLQYLTQ---IKQRT------PLVPV--------KLTLDLGGQFLWVDC 75 (435)
Q Consensus 32 ~~~~~pl~~~~~~~~Y~~~---i~iGt------P~Q~~--------~v~~DTGSs~~Wv~~ 75 (435)
...-+||.... ...|.++ |.||. |+..+ .++||||++++.+|.
T Consensus 216 ~l~~~Pl~~~~-~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~ 275 (403)
T 3aup_A 216 DLAFTPLTITL-QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQ 275 (403)
T ss_dssp TEEEEECEECT-TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECH
T ss_pred ceeecccccCC-CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCH
Confidence 45678888742 3577765 66876 11112 189999999999974
No 63
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=31.17 E-value=35 Score=26.80 Aligned_cols=31 Identities=26% Similarity=0.263 Sum_probs=25.3
Q ss_pred cceEEEEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCH
Q 038219 262 TDYFIEIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLET 308 (435)
Q Consensus 262 ~~y~v~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~ 308 (435)
..|+=++. |+|+|+.+. +++|||+-.+.+.+
T Consensus 10 ~l~~rP~v-ikI~Gq~~e---------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK---------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEEE---------------EEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEEE---------------EEecCCCCcEEEcc
Confidence 45777788 999998653 78999999999885
No 64
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=30.01 E-value=28 Score=33.27 Aligned_cols=45 Identities=7% Similarity=-0.031 Sum_probs=29.1
Q ss_pred CcceEEeEeeCCCCceEEEE---EeeCC-----CCceE---EEEEEcCCCceeecC
Q 038219 31 PKALALLVSKDSSTLQYLTQ---IKQRT-----PLVPV---KLTLDLGGQFLWVDC 75 (435)
Q Consensus 31 ~~~~~~pl~~~~~~~~Y~~~---i~iGt-----P~Q~~---~v~~DTGSs~~Wv~~ 75 (435)
....-.||........|+++ |.||. |+..+ .++||||++++.+|.
T Consensus 190 g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~ 245 (381)
T 1t6e_X 190 QSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRP 245 (381)
T ss_dssp TTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECH
T ss_pred CcceeeccccCCCCcceEEEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCH
Confidence 34557788764333356554 67875 22223 389999999999974
No 65
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=29.66 E-value=42 Score=29.18 Aligned_cols=26 Identities=19% Similarity=0.125 Sum_probs=23.2
Q ss_pred EEEEEeeCCCCceEEEEEEcCCCceeec
Q 038219 47 YLTQIKQRTPLVPVKLTLDLGGQFLWVD 74 (435)
Q Consensus 47 Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~ 74 (435)
=.++++||. |.+..++|||.+++-+.
T Consensus 113 P~~~iki~G--q~~e~LlDTGAD~TVl~ 138 (203)
T 3ka2_A 113 PLVTIRIGG--QLKEALLDTGADDTVIE 138 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred CcEEEEECC--EEEeeeecccCCceeee
Confidence 368899999 99999999999999884
No 66
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=29.64 E-value=36 Score=27.42 Aligned_cols=27 Identities=26% Similarity=0.305 Sum_probs=21.3
Q ss_pred EEeEEEECCEEeecCcccccccccCCCCeEEecCcceeeeCH
Q 038219 267 EIKSILIGGNVVPLNTSLLSINKQGNGGTKVSTADPYTVLET 308 (435)
Q Consensus 267 ~l~~i~v~~~~~~~~~~~~~~~~~g~~~~iiDTGTs~~~lp~ 308 (435)
++..++|+|+.+. +++|||+..+.|++
T Consensus 23 P~v~i~I~G~~~~---------------~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 23 PRITLKVGGQPVT---------------FLVDTGAQHSVLTQ 49 (132)
T ss_dssp SEEEEEETTEEEE---------------EEECTTCSSCEECS
T ss_pred CEEEEEECCEEEE---------------EEEeCCCCeEEEcc
Confidence 4456888887553 78999999999985
No 67
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=29.31 E-value=69 Score=29.75 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=28.2
Q ss_pred CcceEEeEeeCCCCceEEE---EEeeCCCC---ceEEEEEEcCCCceeecCC
Q 038219 31 PKALALLVSKDSSTLQYLT---QIKQRTPL---VPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 31 ~~~~~~pl~~~~~~~~Y~~---~i~iGtP~---Q~~~v~~DTGSs~~Wv~~~ 76 (435)
.....+|+.... .|.+ .|.||.-. ....++||||++++++|-.
T Consensus 181 g~l~~~p~~~~~---~~~v~l~~i~v~g~~~~~~~~~~iiDSGtt~~~lP~~ 229 (342)
T 3pvk_A 181 GSLIALPVTSDR---ELRISLGSVEVSGKTINTDNVDVLLDSGTTITYLQQD 229 (342)
T ss_dssp SCCEEEECCCSS---SCEEEEEEEEETTEEEEEEEEEEEECTTCSSEEECHH
T ss_pred eeeEEeecCccc---eEEEEEeEEEECCEEecCCCceEEEeCCCCCeecCHH
Confidence 344566776532 4544 47787621 1267999999999999843
No 68
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=27.34 E-value=58 Score=30.17 Aligned_cols=40 Identities=15% Similarity=0.051 Sum_probs=27.7
Q ss_pred eEEeEeeCCCCceEEEE---EeeCCC-----CceEEEEEEcCCCceeecCC
Q 038219 34 LALLVSKDSSTLQYLTQ---IKQRTP-----LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~---i~iGtP-----~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
.-+|+.. ...|.++ |.||.- .....++||||++++++|..
T Consensus 181 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~ 228 (329)
T 1htr_B 181 YWAPVTQ---ELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQ 228 (329)
T ss_dssp EEEEBCS---SSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGG
T ss_pred EEEECCC---CceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHH
Confidence 4455543 3466554 678751 35678999999999999854
No 69
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=27.24 E-value=57 Score=31.26 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=28.0
Q ss_pred eEEeEeeCCCCceEEEE---EeeCCC----CceEEEEEEcCCCceeecCC
Q 038219 34 LALLVSKDSSTLQYLTQ---IKQRTP----LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~---i~iGtP----~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
.-+|+.. ..+|.++ |.||.- .....+++|||++++++|..
T Consensus 234 ~~~pv~~---~~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~ 280 (383)
T 2x0b_A 234 HYINLIK---TGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 280 (383)
T ss_dssp EEEEBSS---TTSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECHH
T ss_pred EEEEcCC---CceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHH
Confidence 3455543 3566654 778863 25678999999999999853
No 70
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=26.34 E-value=54 Score=30.76 Aligned_cols=42 Identities=14% Similarity=0.071 Sum_probs=29.3
Q ss_pred cceEEeEeeCCCCceEEEE---EeeCCC----CceEEEEEEcCCCceeecCC
Q 038219 32 KALALLVSKDSSTLQYLTQ---IKQRTP----LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 32 ~~~~~pl~~~~~~~~Y~~~---i~iGtP----~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
...-+|+... ..|.+. |.||.- .....++||||++++++|..
T Consensus 191 ~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTs~~~lP~~ 239 (351)
T 1tzs_A 191 SLNWVPVTKQ---AYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSD 239 (351)
T ss_dssp CCEEEECSEE---TTEEEEEEEEEETTEEEECTTCEEEEECTTCSSEEECHH
T ss_pred ceEEEecCCC---ceEEEEeCEEEECCceEEcCCCceEEeccCCcceeCCHH
Confidence 4456677652 466654 678762 34578999999999999853
No 71
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=25.62 E-value=76 Score=29.28 Aligned_cols=42 Identities=10% Similarity=0.013 Sum_probs=29.8
Q ss_pred CcceEEeEeeCCCCceEEEE---EeeCCC----CceEEEEEEcCCCceeecCC
Q 038219 31 PKALALLVSKDSSTLQYLTQ---IKQRTP----LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 31 ~~~~~~pl~~~~~~~~Y~~~---i~iGtP----~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
....-+|+... ..|.+. |.||.- .+ ..++||||++++++|..
T Consensus 177 g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~-~~aiiDSGTt~~~lp~~ 225 (324)
T 1am5_A 177 GSIHWIPVTAE---KYWQVALDGITVNGQTAACEG-CQAIVDTGTSKIVAPVS 225 (324)
T ss_dssp SCCEEEEEEEE---TTEEEEECEEEETTEECCCCC-EEEEECTTCSSEEECTT
T ss_pred CceEEEecCCC---cEEEEEEeEEEECCceeeccC-ceEEEecCCccEECCHH
Confidence 34566777652 466664 678762 22 78999999999999865
No 72
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=25.52 E-value=72 Score=29.97 Aligned_cols=46 Identities=13% Similarity=0.087 Sum_probs=29.9
Q ss_pred CcceEEeEeeCCCC-ceEEEE---EeeCCC----CceEEEE-EEcCCCceeecCC
Q 038219 31 PKALALLVSKDSST-LQYLTQ---IKQRTP----LVPVKLT-LDLGGQFLWVDCD 76 (435)
Q Consensus 31 ~~~~~~pl~~~~~~-~~Y~~~---i~iGtP----~Q~~~v~-~DTGSs~~Wv~~~ 76 (435)
.....+|+...... ..|.+. |.||.- .....++ ||||++++++|..
T Consensus 194 g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~ 248 (361)
T 1mpp_A 194 GDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSS 248 (361)
T ss_dssp SCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHH
T ss_pred CceEEEEcccCCCceeEEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHH
Confidence 34567788763211 156554 778862 1235688 9999999999853
No 73
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=24.87 E-value=95 Score=28.73 Aligned_cols=43 Identities=16% Similarity=0.152 Sum_probs=28.5
Q ss_pred CcceEEeEeeCCCCceEEEE---EeeCCCC--ceEEEEEEcCCCceeecCC
Q 038219 31 PKALALLVSKDSSTLQYLTQ---IKQRTPL--VPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 31 ~~~~~~pl~~~~~~~~Y~~~---i~iGtP~--Q~~~v~~DTGSs~~Wv~~~ 76 (435)
.....+|+.... .|.++ |.||.-. ....++||||++++++|-.
T Consensus 184 g~l~~~p~~~~~---~~~v~l~~i~v~g~~~~~~~~~iiDSGtt~~~lP~~ 231 (339)
T 3fv3_A 184 GKLVAEQVTSSQ---ALTISLASVNLKGSSFSFGDGALLDSGTTLTYFPSD 231 (339)
T ss_dssp SCCEEEEBCCSS---SCEEEEEEEEESSCEEEEEEEEEECTTBSSEEECHH
T ss_pred cceEEEecccCc---cEEEEEEEEEECCEeecCCccEEEeCCCCCEecCHH
Confidence 345667776532 45444 7787632 2346999999999999843
No 74
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=24.84 E-value=74 Score=29.53 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=25.6
Q ss_pred eEEeEeeCCCCceEEE---EEeeCCCC--ceEEEEEEcCCCceeecCC
Q 038219 34 LALLVSKDSSTLQYLT---QIKQRTPL--VPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~---~i~iGtP~--Q~~~v~~DTGSs~~Wv~~~ 76 (435)
..+|+... ..|.+ .|.||.-. ....++||||++++++|..
T Consensus 185 ~~~p~~~~---~~~~v~l~~i~v~g~~~~~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 185 TALPVTSS---VELRVHLGSINFDGTSVSTNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEECCCS---SSCEEEEEEEEETTEEEEEEEEEEECTTCSSEEECHH
T ss_pred EEEEccCC---CeEEEEEeEEEECCEeccCCccEEEeCCCCcEecCHH
Confidence 34555543 24544 47788621 1246899999999999843
No 75
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=24.79 E-value=51 Score=31.91 Aligned_cols=43 Identities=7% Similarity=0.059 Sum_probs=28.9
Q ss_pred ceEEeEeeCCC-----------CceEEEE---EeeCCCC-------------ceEEEEEEcCCCceeecC
Q 038219 33 ALALLVSKDSS-----------TLQYLTQ---IKQRTPL-------------VPVKLTLDLGGQFLWVDC 75 (435)
Q Consensus 33 ~~~~pl~~~~~-----------~~~Y~~~---i~iGtP~-------------Q~~~v~~DTGSs~~Wv~~ 75 (435)
..-.||..... ...|+++ |.||.-. ..-.++||||++++.+|.
T Consensus 212 l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~ 281 (413)
T 3vla_A 212 LTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLET 281 (413)
T ss_dssp SEEEECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEH
T ss_pred eeEeecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCH
Confidence 56778876432 1567664 7788621 113489999999999974
No 76
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=23.84 E-value=79 Score=29.43 Aligned_cols=42 Identities=12% Similarity=0.209 Sum_probs=27.6
Q ss_pred cceEEeEeeCCCCceEEE---EEeeCCCC--ceEEEEEEcCCCceeecCC
Q 038219 32 KALALLVSKDSSTLQYLT---QIKQRTPL--VPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 32 ~~~~~pl~~~~~~~~Y~~---~i~iGtP~--Q~~~v~~DTGSs~~Wv~~~ 76 (435)
....+|+.... .|.+ .|.||.-. ....++||||++++++|-.
T Consensus 183 ~l~~~p~~~~~---~~~v~l~~i~v~g~~~~~~~~aiiDSGTt~~~lP~~ 229 (342)
T 2qzx_A 183 SLVDLPITSEK---KLTVGLRSVNVRGRNVDANTNVLLDSGTTISYFTRS 229 (342)
T ss_dssp CCEEEECCCSS---SCEEEEEEEEETTEEEEEEEEEEECTTCSSEEECHH
T ss_pred ceEEEeccCCc---eEEEEEeEEEECCEecCCCcCEEEeCCCCCEEcCHH
Confidence 45567776532 4444 47888621 1246899999999999843
No 77
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=23.39 E-value=68 Score=30.45 Aligned_cols=43 Identities=14% Similarity=-0.029 Sum_probs=29.6
Q ss_pred CcceEEeEeeCCCCceEEEE---EeeCCC----CceEEEEEEcCCCceeecCC
Q 038219 31 PKALALLVSKDSSTLQYLTQ---IKQRTP----LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 31 ~~~~~~pl~~~~~~~~Y~~~---i~iGtP----~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
....-+|+... ..|.+. |.||.- .+...+++|||++++++|..
T Consensus 221 g~l~~~pv~~~---~~w~v~l~~i~v~g~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (370)
T 3psg_A 221 GSLNWVPVSVE---GYWQITLDSITMDGETIACSGGCQAIVDTGTSLLTGPTS 270 (370)
T ss_dssp SCCEEEECSEE---TTEEEEECEEESSSSEEECTTCEEEEECTTCCSEEEEHH
T ss_pred Ccceeeccccc---ceeEEEEeEEEECCEEEecCCCceEEEcCCCCcEECCHH
Confidence 34456677653 456664 667752 25678999999999999843
No 78
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=22.95 E-value=52 Score=30.61 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=27.1
Q ss_pred eEEeEeeCCCCceEEEE---EeeCCC----CceEEEEEEcCCCceeecCC
Q 038219 34 LALLVSKDSSTLQYLTQ---IKQRTP----LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~---i~iGtP----~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
.-+|+.. ...|.+. |.||.- +....++||||++++++|..
T Consensus 191 ~~~p~~~---~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~ 237 (341)
T 3k1w_A 191 HYINLIK---TGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 237 (341)
T ss_dssp EEEECSS---TTSCEEEECCEEETTEEEECTTCEEEEECTTCSSEEECHH
T ss_pred EEEecCC---CCEEEEEEeEEEECCEEeecCCCCEEEEECCCChhcCCHH
Confidence 3445443 3456655 677753 34578999999999999843
No 79
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=22.86 E-value=70 Score=29.54 Aligned_cols=40 Identities=13% Similarity=-0.061 Sum_probs=26.9
Q ss_pred eEEeEeeCCCCceEEE---EEeeCCC----CceEEEEEEcCCCceeecCC
Q 038219 34 LALLVSKDSSTLQYLT---QIKQRTP----LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~---~i~iGtP----~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
.-+|+.. ...|.+ .|.||.- +....++||||++++++|..
T Consensus 181 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 227 (323)
T 3cms_A 181 HWVPVTV---QQYWQFTVDSVTISGVVVACEGGCQAILDTGTSKLVGPSS 227 (323)
T ss_dssp EEEECSS---BTTBEEEEEEEEETTEEEESTTCEEEEECTTCCSEEECHH
T ss_pred EEEECcc---CCeEEEEEeeEEECCEEeecCCCcEEEEecCCccEeCCHH
Confidence 3455543 245655 4778762 24568999999999999853
No 80
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=22.69 E-value=43 Score=31.23 Aligned_cols=40 Identities=5% Similarity=-0.064 Sum_probs=27.2
Q ss_pred eEEeEeeCCCCceEEEE---EeeCCC---CceEEEEEEcCCCceeecCC
Q 038219 34 LALLVSKDSSTLQYLTQ---IKQRTP---LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
.-+|+.. ...|.++ |.||.- .....++||||++++++|..
T Consensus 185 ~~~p~~~---~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~ 230 (330)
T 1yg9_A 185 TYVPLVG---DDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKA 230 (330)
T ss_dssp EEEEBSC---TTSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEHH
T ss_pred EEEECCC---CCEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCHH
Confidence 3455542 3456555 778762 34568999999999999853
No 81
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=22.08 E-value=62 Score=29.99 Aligned_cols=40 Identities=15% Similarity=0.134 Sum_probs=26.2
Q ss_pred eEEeEeeCCCCceEEEE---EeeCCC---CceEEEEEEcCCCceeecCC
Q 038219 34 LALLVSKDSSTLQYLTQ---IKQRTP---LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
.-+|+.. ...|.++ |.||.- .....++||||++++++|..
T Consensus 184 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1dpj_A 184 TWLPVRR---KAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSG 229 (329)
T ss_dssp EEEECSS---BTTBEEEEEEEEETTEEEECSSCEEEECTTCSCEEECHH
T ss_pred EEEEcCC---CceEEEEeeeEEECCeEecCCCccEEeeCCCCcEECCHH
Confidence 3455543 2456554 678752 23467999999999999843
No 82
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=21.60 E-value=68 Score=31.76 Aligned_cols=39 Identities=10% Similarity=-0.095 Sum_probs=28.0
Q ss_pred eEEeEeeCCCCceEEEE---EeeCC-----CCceEEEEEEcCCCceeecC
Q 038219 34 LALLVSKDSSTLQYLTQ---IKQRT-----PLVPVKLTLDLGGQFLWVDC 75 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~---i~iGt-----P~Q~~~v~~DTGSs~~Wv~~ 75 (435)
.-+|+.. .++|.+. |.||. +.....+++|||++++++|.
T Consensus 223 ~~~pv~~---~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~ 269 (478)
T 1qdm_A 223 TYVPVTQ---KGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPT 269 (478)
T ss_dssp EEEEEEE---ETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECH
T ss_pred eEEeccC---CCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCH
Confidence 4456654 2467665 67775 33567899999999999984
No 83
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=21.15 E-value=77 Score=29.12 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=27.0
Q ss_pred eEEeEeeCCCCceEEEE---EeeCCC----CceEEEEEEcCCCceeecCC
Q 038219 34 LALLVSKDSSTLQYLTQ---IKQRTP----LVPVKLTLDLGGQFLWVDCD 76 (435)
Q Consensus 34 ~~~pl~~~~~~~~Y~~~---i~iGtP----~Q~~~v~~DTGSs~~Wv~~~ 76 (435)
.-+|+.. ...|.++ |.||.- +....++||||++.+++|-.
T Consensus 178 ~~~p~~~---~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~ 224 (320)
T 4aa9_A 178 HWVPVTL---QQYWQFTVDSVTINGVAVACVGGCQAILDTGTSVLFGPSS 224 (320)
T ss_dssp EEEECSS---BTTBEEEECEEEETTEEEESTTCEEEEECTTCSSEEEEHH
T ss_pred EEEEccc---CCceEEEEeEEEECCEEeccCCCcEEEEECCCCcEECCHH
Confidence 3455543 3456554 677752 24678999999999999843
Done!