BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038229
(467 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224103835|ref|XP_002313212.1| global transcription factor group [Populus trichocarpa]
gi|222849620|gb|EEE87167.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 141/216 (65%), Gaps = 31/216 (14%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
M+ C +IL+KLMK K G+ FNTPVDVV L+L DYHDIIK PMDLGTV++ L N+Y+ P+
Sbjct: 2 MKNCSQILSKLMKQKLGYIFNTPVDVVGLQLHDYHDIIKNPMDLGTVKTNLSKNLYESPR 61
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL-SKQQQRQGI--------- 290
+FA DVRLTFNNA+ YNPKGH VY +AE +F+ +++ + KQQQ G+
Sbjct: 62 DFAADVRLTFNNAMKYNPKGHEVYILAEQFLTRFQDLYRPIKEKQQQPTGMNQNPNSVRT 121
Query: 291 -----------LGRGK-------AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSG 332
L + K REM+LEEK LG L+ LPQE++ +++ I++KR
Sbjct: 122 PSPMRVPQVKPLKQPKPKAKDPNKREMNLEEKHKLGVGLQSLPQEKMEQVVQIIRKR--- 178
Query: 333 NGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
NG L GDEIELDIEA+D +TL +L RFV N+KK
Sbjct: 179 NGHLRQEGDEIELDIEAVDTETLWELDRFVTNYKKM 214
>gi|359496779|ref|XP_002264867.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE2-like
[Vitis vinifera]
Length = 499
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 173/524 (33%), Positives = 235/524 (44%), Gaps = 172/524 (32%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKCNNPPLFQSK 60
MA A L SRNE WGE KVY R+++ NNN + P
Sbjct: 1 MASAVLASRNEAYWGERKVYMRKYT-------------------NNNNSRLKFIPNPNPN 41
Query: 61 PNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLP-----------------------ESDY 97
PN + N + HD S F++T P L + Y
Sbjct: 42 PNSDLNLSRQIHDLPSKAQFRRTNEPPAASLLSPVANDSSSLNRKAISLNDRKESSQGGY 101
Query: 98 VTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQ-------------------- 137
VTFNLGAY+RRELK+L+KRL+ +L++VRNL +RI + DF+
Sbjct: 102 VTFNLGAYSRRELKELKKRLLLELDQVRNLRNRIESRDFESRSVYPAPHLSSSHGGREAI 161
Query: 138 -----------------------------ATHAYPTT------------KSQNRGGSKRA 156
A YP + KS+ GSKR+
Sbjct: 162 STPRPPPLQIKYALDSPGAAASKEKRTPKANQCYPPSEFLIGKNKTVSPKSKKVSGSKRS 221
Query: 157 NPFGNPK-AKRAAAGTXSLTS----TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRL 211
P + + +KR + MRRCG+ILTKLMK K GW FN PVDVV L L
Sbjct: 222 LPVASGRDSKRPMPEPEPEPLMDKLVSSMMRRCGQILTKLMKHKFGWVFNKPVDVVGLGL 281
Query: 212 RDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLS 271
DYH I+K+PMDLG+V+SKLE VY P +FA D
Sbjct: 282 HDYHKIVKQPMDLGSVKSKLERKVYLSPLDFASD-------------------------- 315
Query: 272 AKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNS 331
REMS EEK LG +L +P E++ +L+ I++KRN
Sbjct: 316 -------------------------REMSFEEKAKLGMNLXNVPPEKMEQLVAIIRKRNP 350
Query: 332 GNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAA--- 388
++ GD+IELDIEA+D +TL +L RFV N+KK E K ++ + +A
Sbjct: 351 ---HMAQDGDDIELDIEAVDIETLWELDRFVSNYKKME-SKIRRQGLIMNQTLATQLNKS 406
Query: 389 -----PVVIERSKKGDVAAEEEVDIGEEIPVQNYPPVVIERDDA 427
P V +++KKG++ EE+VDIGEE+PV ++PPV I++D A
Sbjct: 407 PVTDNPDVGQKNKKGEIG-EEDVDIGEEMPVSHFPPVEIDKDAA 449
>gi|359475584|ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [Vitis vinifera]
Length = 561
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 150/247 (60%), Gaps = 33/247 (13%)
Query: 56 LFQSKPNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPE---------------SDYVTF 100
S PNPN N + + H P +++ +PA QS + YVTF
Sbjct: 33 FHSSNPNPN-NSKRKTHAPAGDIN---DLSPAVTQSASDDASSFNQRSIVEFNRGRYVTF 88
Query: 101 NLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQA-THAYPTTKSQNR------GGS 153
N+G+Y+R++L L+ RLVS+LE+++NL +RI + D Q + T Q R G+
Sbjct: 89 NIGSYSRKDLVQLKNRLVSELEKIQNLSNRIESGDLQLRSGGDRTANKQQRPNNKKIAGN 148
Query: 154 KRANPFGNPKA-KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLR 212
KR PF + + KR+AA SL M+ CG+ LTKLMK K W FN+PVDVV + L
Sbjct: 149 KRPPPFDSGRGPKRSAAENASL------MKLCGQTLTKLMKHKHSWVFNSPVDVVGMGLH 202
Query: 213 DYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSA 272
DYH IIK+PMDLGTV+SK+ N+Y P +FA DVRLTF+NAL+YNPKGH V+ MAE L A
Sbjct: 203 DYHQIIKRPMDLGTVKSKIAKNLYDSPLDFAADVRLTFDNALLYNPKGHDVHVMAEQLLA 262
Query: 273 KFEQMFQ 279
+FE +F+
Sbjct: 263 RFEDLFK 269
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 88/138 (63%), Gaps = 11/138 (7%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REMSLEEK LG L+ LPQE++ +++ I+ K+N G L+ GDEIELDIEA+D +TL
Sbjct: 387 REMSLEEKHKLGLGLQSLPQEKMDQVVQIISKKN---GHLTQDGDEIELDIEAVDTETLW 443
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVAVAV-------AAPVVIERSKKGDVAAEEEVDIG 409
+L R V N+KK + M + ++ AP + ++ KKG+ A EE+VDIG
Sbjct: 444 ELDRLVTNWKKMVSKIKRQALMVNNNTSSMNERTEPSLAPAMAKKPKKGE-AGEEDVDIG 502
Query: 410 EEIPVQNYPPVVIERDDA 427
+EIP +PPV IE+DDA
Sbjct: 503 DEIPTATFPPVEIEKDDA 520
>gi|296088086|emb|CBI35445.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/244 (44%), Positives = 150/244 (61%), Gaps = 33/244 (13%)
Query: 59 SKPNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPE---------------SDYVTFNLG 103
S PNPN N + + H P +++ +PA QS + YVTFN+G
Sbjct: 48 SNPNPN-NSKRKTHAPAGDIN---DLSPAVTQSASDDASSFNQRSIVEFNRGRYVTFNIG 103
Query: 104 AYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNR-------GGSKRA 156
+Y+R++L L+ RLVS+LE+++NL +RI + D Q T ++ + G+KR
Sbjct: 104 SYSRKDLVQLKNRLVSELEKIQNLSNRIESGDLQLRSGGDRTANKQQRPNNKKIAGNKRP 163
Query: 157 NPFGNPKA-KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYH 215
PF + + KR+AA SL M+ CG+ LTKLMK K W FN+PVDVV + L DYH
Sbjct: 164 PPFDSGRGPKRSAAENASL------MKLCGQTLTKLMKHKHSWVFNSPVDVVGMGLHDYH 217
Query: 216 DIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
IIK+PMDLGTV+SK+ N+Y P +FA DVRLTF+NAL+YNPKGH V+ MAE L A+FE
Sbjct: 218 QIIKRPMDLGTVKSKIAKNLYDSPLDFAADVRLTFDNALLYNPKGHDVHVMAEQLLARFE 277
Query: 276 QMFQ 279
+F+
Sbjct: 278 DLFK 281
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 87/145 (60%), Gaps = 18/145 (12%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REMSLEEK LG L+ LPQE++ +++ I+ K+N G L+ GDEIELDIEA+D +TL
Sbjct: 383 REMSLEEKHKLGLGLQSLPQEKMDQVVQIISKKN---GHLTQDGDEIELDIEAVDTETLW 439
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVAVAV--------------AAPVVIERSKKGDVAA 402
+L R V N+KK + M + A AP + ++ KKG+ A
Sbjct: 440 ELDRLVTNWKKMVSKIKRQALMVNNNTAATEVNRSSMNERTEPSLAPAMAKKPKKGE-AG 498
Query: 403 EEEVDIGEEIPVQNYPPVVIERDDA 427
EE+VDIG+EIP +PPV IE+DDA
Sbjct: 499 EEDVDIGDEIPTATFPPVEIEKDDA 523
>gi|356554832|ref|XP_003545746.1| PREDICTED: uncharacterized protein LOC100819363 [Glycine max]
Length = 529
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 157/283 (55%), Gaps = 40/283 (14%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKCNNPPLFQSK 60
MA A L +RNEP W +RH T +N N L SK
Sbjct: 1 MASAVLANRNEPNW-------QRHRGGGAGFMGKTPFSN------------PNSKLANSK 41
Query: 61 PNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSD 120
+ A D S+++ + +L S YVTFN+ + T++EL D + LVS+
Sbjct: 42 ------RTQSASDDASSINRRSN------DALTHSQYVTFNIASCTKKELNDFKNLLVSE 89
Query: 121 LERVRNLGSRIANSDF---QATHAYPTTKSQNR-GGSKRANPFGNPKAKRAAAGTXSLTS 176
LE++R L ++I +S+F Q+ + +P S + G+KR P + K + S +
Sbjct: 90 LEQIRKLRNQIESSEFQPGQSLNGHPKKPSSKKVSGNKRPWPSNSAKDLK-----RSHSE 144
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
N M+ C ++L KLMK K GW FN PVD+V L+L DY DIIK+PMDLGTV+S L NVY
Sbjct: 145 AGNLMKCCSQVLQKLMKHKHGWVFNAPVDIVGLKLHDYCDIIKQPMDLGTVKSNLSKNVY 204
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ 279
P +FA DVRLTFNNAL YNPKGH VY MAE L A+FE++++
Sbjct: 205 ATPADFASDVRLTFNNALAYNPKGHDVYTMAEQLLARFEELYR 247
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 91/155 (58%), Gaps = 28/155 (18%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+MSLEEK LG L+ LP E++ +++ I+++RN G L GDEIELDIEA+D +TL
Sbjct: 342 RDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRN---GHLKQDGDEIELDIEAVDTETLW 398
Query: 357 QLVRFVDNFKK--------------------AEKDKTEKE-PMCSQVAVAVAAPVVIERS 395
+L R V N+KK A+ +K E P +V APV ++++
Sbjct: 399 ELDRLVTNYKKMVSKIKRQALMGNTNNNNNDAQSNKGNGELPASEKVD---GAPVEVKKA 455
Query: 396 KKGDVAAEEEVDIGEEIPVQNYPPVVIERDDASSG 430
KK + A EE++DIG+E+P +PPV IE+D +G
Sbjct: 456 KKVE-AGEEDIDIGDEMPTSMFPPVEIEKDKDVAG 489
>gi|224056335|ref|XP_002298808.1| global transcription factor group [Populus trichocarpa]
gi|222846066|gb|EEE83613.1| global transcription factor group [Populus trichocarpa]
Length = 474
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 166/292 (56%), Gaps = 23/292 (7%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKCNNPPLFQSK 60
MA A L +RNEP W +P+ +R A + S N + +K P +
Sbjct: 1 MASAVLANRNEPSWTQPQP-QQRGGGAKFMGKIPFSNPNPKFSKKRQFQPPQQPQILDVD 59
Query: 61 PNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSD 120
+P + A D S+++ + P Q +VTFN+G+Y+++EL +L+ RLV +
Sbjct: 60 ESP-----SAASDDASSIN--RRPQNNH-QDFNTGGFVTFNVGSYSKKELIELKNRLVHE 111
Query: 121 LERVRNLGSRIANSDFQ----ATHAYPTTKSQNRGGSKRANPFGNP----KAKRAAAGTX 172
LE++R+L +RI +S+ Q + +Y S N+ S PF P KR+
Sbjct: 112 LEKIRDLKNRIESSESQIRQSSNFSYKKQTSTNKKVSGNKRPFPAPSNFNNLKRSNPENA 171
Query: 173 SLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE 232
L M+ C +IL+KLMK K G+ FN+PVDVV ++L DYHDIIK PMDLGTV+SKL
Sbjct: 172 QL------MKNCSQILSKLMKHKLGYIFNSPVDVVGMQLHDYHDIIKSPMDLGTVKSKLT 225
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
N+Y+ P++FA DVRLTFNNA+ YNPKGH VY +AE +FE ++ + ++
Sbjct: 226 KNLYESPRDFAADVRLTFNNAMKYNPKGHEVYMLAEQFLTRFEDFYRPIKEK 277
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REMSLEEK LG L+ LPQE++ +++ I++KRN G L GDEIELDIEA+D +TL
Sbjct: 374 REMSLEEKHKLGVGLQSLPQEKMEQVVQIIRKRN---GHLRQEGDEIELDIEAVDTETLW 430
Query: 357 QLVRFVDNFKK 367
+L RFV N+KK
Sbjct: 431 ELDRFVTNYKK 441
>gi|356554838|ref|XP_003545749.1| PREDICTED: transcription factor GTE11-like [Glycine max]
Length = 536
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 169/308 (54%), Gaps = 40/308 (12%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKC-NNPPLFQS 59
MA A L +RNEP W PK R A V S N PK +NP L S
Sbjct: 1 MASAVLANRNEPNW--PK---HRVGGAGFMGKVPFSNPN---------PKSKSNPKLANS 46
Query: 60 KPNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVS 119
K + A D S+++ + + S YV+FN+ +YT +E+ DL+ RL S
Sbjct: 47 K------RTLSASDDASSINRRSN------DFVTFSQYVSFNIASYTNKEINDLKDRLTS 94
Query: 120 DLERVRNLGSRIANSDFQATHAY---PTTKSQNR-GGSKRANPFGNP-KAKRAAAGTXSL 174
+LER + + +RI + D Q ++ P S + G+KR P + KR+ + SL
Sbjct: 95 ELERTQRIRNRIESGDLQPGQSFNGHPKKPSNKKVSGNKRPLPSNSATDLKRSHSEVGSL 154
Query: 175 TSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENN 234
M+ C ++L KLMK K GW FN PVDVV L+L DY+D+IK+PMDLGTV+S L N
Sbjct: 155 ------MKGCSQVLQKLMKHKHGWIFNAPVDVVGLQLTDYYDVIKQPMDLGTVKSNLSMN 208
Query: 235 VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRG 294
Y P +FA DVRLTFNNAL YNPKGH VY +AE L +FE++++ L ++ +G +G
Sbjct: 209 KYTTPSDFASDVRLTFNNALAYNPKGHDVYTVAELLLTRFEELYRPL--HEKFEGSVGHD 266
Query: 295 KAREMSLE 302
+ E L+
Sbjct: 267 RESEEELQ 274
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 20/150 (13%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+MSLEEK LG L+ LP E++ +++ I+++RN G L GDEIELDIEA+D +TL
Sbjct: 351 RDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRN---GHLKQDGDEIELDIEAVDTETLW 407
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQV---------------AVAVAAPVVIERSKKGDV- 400
+L R V N+KK K +++ + + A +E K V
Sbjct: 408 ELDRLVTNYKKM-VSKIKRQALMGNIYNDNVQANKGNEELPAREKVERAAVEAKKPKKVE 466
Query: 401 AAEEEVDIGEEIPVQNYPPVVIERDDASSG 430
A +E+VDIG+EIP +PPV IE+D +G
Sbjct: 467 AGDEDVDIGDEIPTSMFPPVEIEKDKDVAG 496
>gi|356549487|ref|XP_003543125.1| PREDICTED: uncharacterized protein LOC100802622 [Glycine max]
Length = 531
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 127/189 (67%), Gaps = 9/189 (4%)
Query: 95 SDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQ---ATHAYPTTKSQNR- 150
S YVTFN+ + T++EL D + RLVS+LE+++ L ++I +S+FQ + + +P S +
Sbjct: 67 SQYVTFNVASCTKKELNDFKNRLVSELEQIQKLRNQIGSSEFQPGQSLNGHPKKPSGKKI 126
Query: 151 GGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLR 210
G+KR P + K + S + N M+ C ++L KL+K K GW F PVDVV L+
Sbjct: 127 SGNKRPLPSNSAKDLK-----RSHSEVGNLMKCCSQVLQKLIKHKHGWVFKAPVDVVGLK 181
Query: 211 LRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETL 270
L DY DIIK+PMDLGTV+S L NVY P +FA DVRLTFNNAL YNPKGH VY MAE L
Sbjct: 182 LHDYCDIIKQPMDLGTVKSNLSKNVYATPADFASDVRLTFNNALAYNPKGHDVYTMAEQL 241
Query: 271 SAKFEQMFQ 279
A+FE++++
Sbjct: 242 LARFEELYR 250
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 24/153 (15%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+MSLEEK LG L+ LP E++ +++ I+++RN G L GDEIELDIEA+D +TL
Sbjct: 344 RDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRN---GHLKQDGDEIELDIEAVDTETLW 400
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQV-------------------AVAVAAPVVIERSKK 397
+L R V N+KK K +++ + + PV +++ KK
Sbjct: 401 ELDRLVTNYKKM-VSKIKRQALMGNIDNNNNDVQSNKGNGELPSSEKVDGGPVEVKKPKK 459
Query: 398 GDVAAEEEVDIGEEIPVQNYPPVVIERDDASSG 430
+ A +E++DIG+E+P +PPV IE+D G
Sbjct: 460 VE-AGDEDIDIGDEMPTSMFPPVEIEKDKDVVG 491
>gi|326489531|dbj|BAK01746.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 174/347 (50%), Gaps = 90/347 (25%)
Query: 98 VTFNLGAY--TRRELKDLRKRLVSDLERVRNLGSRIAN-------SDFQATHA---YPTT 145
VTF+L + TRREL R+RL ++L +VR RI++ S AT P
Sbjct: 41 VTFSLPSTPATRREL---RRRLSAELAQVRAAYKRISSLPAPAPSSALSATDPSTPLPPH 97
Query: 146 KSQNRGGSKRA--NPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTP 203
S ++ SK+A NP G+ +A+R R C +L +LMK K GW FN P
Sbjct: 98 PSVSKHKSKKAPPNPSGSAEARRKLYAP--------VFRSCAVVLARLMKHKHGWVFNVP 149
Query: 204 VDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYV 263
VD +L L DYH II KPMDLGTV+S+L YK P+EFA +VRLTF NA+ YNPKG V
Sbjct: 150 VDASALGLHDYHTIITKPMDLGTVKSRLAAGHYKSPREFATEVRLTFQNAMRYNPKGQDV 209
Query: 264 YAMAETLSAKFEQMFQKLS-------------------KQQQ------------------ 286
Y MAE L FE+ + ++ KQ+Q
Sbjct: 210 YFMAEQLLNMFEEKWPEIEAEIAQLSPQPPTPSSAPPKKQKQREREREREMDNARALERS 269
Query: 287 --------------------RQGILGRGKA-----REMSLEEKMALGRSLEELPQEELGK 321
R +L + KA REM+ EK L L++LP E+L
Sbjct: 270 DSTAHAAALEAPPKPQAGTARPPVLKKPKARDPNKREMTFWEKQRLSNDLQDLPAEKLDN 329
Query: 322 LLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
++ I+KKRNS SL+ H DEIE+DI++ D +TL +L RFV N+KK+
Sbjct: 330 VVQIIKKRNS---SLNQHDDEIEVDIDSFDVETLWELDRFVTNYKKS 373
>gi|357127683|ref|XP_003565508.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 494
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 174/339 (51%), Gaps = 82/339 (24%)
Query: 98 VTFNLGA--YTRRELKDLRKRLVSDLERVRNLGSRIAN-------SDFQAT---HAYPTT 145
VTF+L + TRREL R+RL ++L +VR + R+++ S AT P
Sbjct: 41 VTFSLSSSLATRREL---RRRLSAELAQVRAVSKRLSSLPAPAPSSALSATDPSTPLPPQ 97
Query: 146 KSQNRGGSKRA--NPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTP 203
++ SK+A NP G+ +A+R + CG +LT+LMK K GW FN P
Sbjct: 98 PPSSKHKSKKAPPNPSGSAEARRKLYAP--------VFKSCGLLLTRLMKHKHGWVFNVP 149
Query: 204 VDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYV 263
VD +L L DYH II KPMDLGTV+S+L YK P+EFA +VRLTF NA+ YNPKG V
Sbjct: 150 VDASALGLHDYHTIITKPMDLGTVKSRLAEGHYKSPREFATEVRLTFQNAMKYNPKGQDV 209
Query: 264 YAMAETLSAKFEQMF-------QKLSKQQQ------------------------------ 286
Y MAE L FE+ + +LS Q
Sbjct: 210 YFMAEQLLNMFEEKWPDIEAEIAQLSPQPPTPSSAAPKKPREIDNGRVLERSDSTAHAAG 269
Query: 287 ------------RQGILGRGKA-----REMSLEEKMALGRSLEELPQEELGKLLGIVKKR 329
R +L + KA REM+ EK L L++LP E+L ++ I+KKR
Sbjct: 270 LEATPKPHPGTGRPPVLKKPKAREPNKREMTFWEKQKLSNDLQDLPPEKLDNVVQIIKKR 329
Query: 330 NSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
NS SL+ H DEIE+DI++ D +TL +L RFV N+KK+
Sbjct: 330 NS---SLNQHDDEIEVDIDSFDVETLWELDRFVTNYKKS 365
>gi|389608049|dbj|BAM17630.1| putative RING3 protein [Oryza sativa Indica Group]
Length = 456
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 201/426 (47%), Gaps = 88/426 (20%)
Query: 93 PESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGG 152
P S YV GA RE + LR RL +L +VR L +RI + + + G
Sbjct: 53 PPSSYVALRPGAMAHREARALRDRLAGELGQVRALIARI--------DTWQQGQVKRHGS 104
Query: 153 SKRANPFGNPKAKRAAAGTXSLTSTKNAMR-RCGEILTKLMKDKQGWAFNTPVDVVSLRL 211
+R P P AK + AMR RC +IL KL KDK+ FN PV+V L L
Sbjct: 105 PRRDLP--TPPAK-----------LRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGL 151
Query: 212 RDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLS 271
DYH +IK PMDLGTVR+ L Y +FA DVRLTF+NAL YNP GH V+ A L
Sbjct: 152 HDYHAVIKCPMDLGTVRANLAAGRYSSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLL 211
Query: 272 AKFEQMFQKL----------------------------SKQQQRQGILGRGK-------A 296
A FE+M++ ++ + R G + K
Sbjct: 212 ASFEKMYKAFMSWFEQELKLLEPPMPVPPPELPPATAPAQVKPRAGNVKMRKPKAREPNK 271
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REM+LEEK L LE LP+E++ +L IV+KRN GN L G EIELDI+ +D +T
Sbjct: 272 REMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRN-GNPELV--GGEIELDIDEMDVETQW 328
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPV-----------------------VIE 393
+L RFV+NFKKA + + A + A V IE
Sbjct: 329 ELDRFVNNFKKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATMVDNGDVTMAIE 388
Query: 394 RSKKGDVAAEEE-----VDIGEEIPVQNYPPVVIERDDASSGTSTSSTDSEDSSSSTSSG 448
+ A+ E VDIG+E+P Y V IE+D ++ + +SS+ SS + S
Sbjct: 389 SKDPDKITAQAEQLDEYVDIGDEMPTATYQSVEIEKDTEAASSGSSSSSDSGSSKDSVSE 448
Query: 449 SGSSSS 454
SG++ S
Sbjct: 449 SGNAHS 454
>gi|116309747|emb|CAH66790.1| H0215F08.1 [Oryza sativa Indica Group]
gi|116309918|emb|CAH66952.1| B0809H07.7 [Oryza sativa Indica Group]
Length = 456
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 207/426 (48%), Gaps = 88/426 (20%)
Query: 93 PESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGG 152
P S YV GA RE + LR RL +L +VR L +RI + + + G
Sbjct: 53 PPSSYVALRPGAMAHREARALRDRLAGELGQVRALIARI--------DTWQQGQVKRHGS 104
Query: 153 SKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLR 212
+R P P AK AA +RC +IL KL KDK+ FN PV+V L L
Sbjct: 105 PRRDLP--TPPAKLRAA----------MRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLH 152
Query: 213 DYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSA 272
DYH +IK PMDLGTVR+ L Y +FA DVRLTF+NAL YNP GH V+ A L A
Sbjct: 153 DYHAVIKCPMDLGTVRANLAAGRYSSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLA 212
Query: 273 KFEQMFQKL----------------------------SKQQQRQGILGRGK-------AR 297
FE+M++ ++ + R G + K R
Sbjct: 213 SFEKMYKAFMSWFEQELKLLEPPMPVPPPELPPATAPAQVKPRAGNVKMRKPKAREPNKR 272
Query: 298 EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQ 357
EM+LEEK L LE LP+E++ +L IV+KRN GN L G EIELDI+ +D +T +
Sbjct: 273 EMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRN-GNPELV--GGEIELDIDEMDVETQWE 329
Query: 358 LVRFVDNFKKAEKDKTEKEPMCS-------QVAVAVAAPVVIERS-----KKGDVAA--- 402
L RFV+NFKKA +K+ + + + +VA + +++ S GDV
Sbjct: 330 LDRFVNNFKKA-LNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATMVDNGDVTMAIE 388
Query: 403 --------------EEEVDIGEEIPVQNYPPVVIERDDASSGTSTSSTDSEDSSSSTSSG 448
+E VDIG+E+P Y V IE+D ++ + +SS+ SS + S
Sbjct: 389 SKDPDKITTQAEQLDEYVDIGDEMPTATYQSVEIEKDTEAASSGSSSSSDSGSSKDSVSE 448
Query: 449 SGSSSS 454
SG++ S
Sbjct: 449 SGNAHS 454
>gi|389608036|dbj|BAM17618.1| putative RING3 protein [Oryza sativa Japonica Group]
Length = 456
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 209/426 (49%), Gaps = 88/426 (20%)
Query: 93 PESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGG 152
P S YV GA RE + LR RL +L +VR L +RI + + + G
Sbjct: 53 PPSSYVALRPGAMAHREARALRDRLAGELGQVRALIARI--------DTWQQGQVKRHGS 104
Query: 153 SKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLR 212
+R P P AK AA +RC +IL KL KDK+ FN PV+V L L
Sbjct: 105 PRRDLP--TPPAKLRAA----------MRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLH 152
Query: 213 DYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSA 272
DYH +IK PMDLGTVR+ L Y +FA DVRLTF+NAL YNP GH V+ A L A
Sbjct: 153 DYHAVIKCPMDLGTVRANLAAGRYSSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLA 212
Query: 273 KFEQMF--------QKL--------------------SKQQQRQGILGRGK-------AR 297
FE+M+ Q+L ++ + R G + K R
Sbjct: 213 SFEKMYKACMSWFEQELKLLEPPMPVPPPELPPATAPAQVKPRAGNVKMRKPKAREPNKR 272
Query: 298 EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQ 357
EM+LEEK L LE LP+E++ +L IV+KRN GN L G EIELDI+ +D +T +
Sbjct: 273 EMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRN-GNPELV--GGEIELDIDEMDVETQWE 329
Query: 358 LVRFVDNFKKAEKDKTEKEPMCS-------QVAVAVAAPVVIERS-----KKGDVAA--- 402
L RFV+NFKKA +K+ + + + +VA + +++ S GDV
Sbjct: 330 LDRFVNNFKKA-LNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATMVDNGDVTMAIE 388
Query: 403 --------------EEEVDIGEEIPVQNYPPVVIERDDASSGTSTSSTDSEDSSSSTSSG 448
+E VDIG+E+P Y V IE+D ++ + +SS+ SS + S
Sbjct: 389 SKDPDKITTQAEQLDEYVDIGDEMPTATYQSVEIEKDTEAASSGSSSSSDSGSSKDSVSE 448
Query: 449 SGSSSS 454
SG++ S
Sbjct: 449 SGNAHS 454
>gi|242077236|ref|XP_002448554.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
gi|241939737|gb|EES12882.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
Length = 458
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 194/421 (46%), Gaps = 111/421 (26%)
Query: 84 PTPAQPQSLPESD---------------YVTFNLGAYTRRELKDLRKRLVSDLERVRNLG 128
P+P+QP P +D YVTF + +RE + LR RL +L +VR L
Sbjct: 31 PSPSQPH--PRADGSKSKSKPRAAAAVGYVTFRPSSLGQREARALRDRLAGELGQVRALL 88
Query: 129 SRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMR-RCGEI 187
SRI Q P ++ + MR RCG+I
Sbjct: 89 SRIDTWQQQGPPPLPPPPAK--------------------------QQLRGTMRKRCGQI 122
Query: 188 LTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVR 247
LT+L KDK+ FN PV+V L L DYH +IK+PMDLGTV+ L Y +FA DVR
Sbjct: 123 LTRLRKDKRSVWFNAPVEVERLGLHDYHTVIKRPMDLGTVKEGLAAGRYASHDDFAADVR 182
Query: 248 LTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK--------------------------- 280
LTF NAL YNP GH V+ A L A FE+M+++
Sbjct: 183 LTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALANFEEECRSLEPPPRPVAVELPPPP 242
Query: 281 -----LSKQQQRQGILGRGK-------AREMSLEEKMALGRSLEELPQEELGKLLGIVKK 328
+K + R G + K REMSLEEK L LE LP+E++ +L IV+K
Sbjct: 243 AAEPVEAKVKPRAGNVRMRKPKAREPNKREMSLEEKNMLRIGLESLPEEKMHNVLQIVRK 302
Query: 329 RNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAA 388
RN+ L GDEIELDI+ +D +T +L RFV NF KA K K+++ M + A V +
Sbjct: 303 RNNNPEML---GDEIELDIDEMDVETQWELDRFVTNFNKALK-KSQRAAMMNGGAADVTS 358
Query: 389 PVVIE--RSKKGDVAA----------------------EEEVDIGEEIPVQNYPPVVIER 424
V E + GDV A +E VDIG+E+P Y + IE+
Sbjct: 359 AAVAEDDTAPVGDVPALVDNDDAESEKPVKSTAMAEQVDEYVDIGDEMPTATYQSMEIEK 418
Query: 425 D 425
D
Sbjct: 419 D 419
>gi|168024468|ref|XP_001764758.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684052|gb|EDQ70457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 317
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 161/322 (50%), Gaps = 71/322 (22%)
Query: 95 SDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSK 154
S VT ++ +R + +LRK+L LE VR + SRI + +RG K
Sbjct: 12 SGVVTVDVAKLSREQRSELRKKLKRGLEEVRLVVSRIDT----------WLEVLSRGKGK 61
Query: 155 RANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDY 214
+ KR A + +++C +L KLM K GW FN PVD L L DY
Sbjct: 62 PLQKVEAARGKRVA----------DMLKQCTTLLRKLMTHKHGWVFNEPVDAEKLGLHDY 111
Query: 215 HDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
H IIKKPMDLGT++ KL Y P EFAED+RLTF NA+ YNP GH VY MAE L + F
Sbjct: 112 HSIIKKPMDLGTIKKKLHGKGYPSPVEFAEDIRLTFANAMTYNPVGHDVYVMAELLKSIF 171
Query: 275 EQMFQKLSKQ--------------------------QQRQG-----ILGRGKA------- 296
E+ ++ +S++ + R+G L RGK
Sbjct: 172 EEWWKNMSRKMEEEKRRAEKEEEMLLNDEDSVEETGEVRRGERDLSSLTRGKTSSRMASQ 231
Query: 297 ----------REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELD 346
R M+ EEK L +LE LP ++L +++ I+KKRN L + DEIE+D
Sbjct: 232 PKPRPDEVGKRAMTFEEKRKLSVNLERLPGDKLERIVQIIKKRNP---DLGQNEDEIEVD 288
Query: 347 IEALDNDTLSQLVRFVDNFKKA 368
I++ DNDTL +L RFV N+ K+
Sbjct: 289 IDSFDNDTLWELDRFVTNYMKS 310
>gi|57282320|emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
Length = 617
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 129/219 (58%), Gaps = 16/219 (7%)
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRA 156
Y+T+N+ +Y + EL +LR RLV++LE++RNL RI + ++ KS+ G+KR
Sbjct: 95 YMTYNVASYNKTELHELRSRLVAELEQIRNLKDRIESGQLSTSNPRSHGKSKKLSGNKRP 154
Query: 157 NPFGNPKAKR---------------AAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFN 201
P G+ K ++ G + +N M+ C ++L KLMK K GW FN
Sbjct: 155 TPSGSSKDRKKLLNGVDNRNFGNPGGGGGVKGIIGMENMMKECRQVLAKLMKHKSGWIFN 214
Query: 202 TPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGH 261
TPVD ++ L DYH IIK+PMDLGTV+S L NN Y P EFA DVRLTFNNAL+YNPK
Sbjct: 215 TPVDAKAMGLHDYHQIIKRPMDLGTVKSNLINNFYPTPFEFAADVRLTFNNALLYNPKTD 274
Query: 262 YVYAMAETLSAKFEQMFQKLS-KQQQRQGILGRGKAREM 299
V+ AE L A+FE MF+ + K + G GR R +
Sbjct: 275 QVHGFAEQLLARFEDMFRPIQDKLNKLDGGTGRRDFRAI 313
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 28/158 (17%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REMS+EEK LG L+ LPQE++ +L+ I++KRN L+ GDEIELDIEALD +TL
Sbjct: 417 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNE---HLAQDGDEIELDIEALDTETLW 473
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVA----------------VAVA-APVVIERS---- 395
+L RFV N+KK KT+++ + + + VA A P E++
Sbjct: 474 ELDRFVTNWKKMV-SKTKRQALINNLGQPPSASAAASAATTTSVAEADGPSTSEKNDSFK 532
Query: 396 ---KKGDVAAEEEVDIGEEIPVQNYPPVVIERDDASSG 430
K GD E++V+I ++ P ++PPV IE D G
Sbjct: 533 KPKKGGDAGDEDDVEIEDDEPATHFPPVEIEIDKDEGG 570
>gi|57282316|emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana
benthamiana]
Length = 615
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 151/304 (49%), Gaps = 34/304 (11%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKCNNPPLFQSK 60
MA A L SRNE W + A T ++ N+N F
Sbjct: 1 MASAVLASRNESSWAQ-------SGGAGGGFMGKTPYSHTHLNPNSNPKPKKKQKQFHHA 53
Query: 61 PNPNQNKETRAHDPTSN---VHFKKTPTPAQPQ--SLPESDYVTFNLGAYTRRELKDLRK 115
N QN E+ A T++ F + P + L Y+T+N+ +Y + EL +LR
Sbjct: 54 SNGRQNDESPAVTQTASDDAYSFNQRPIESSTNVDGLNLGGYMTYNVASYNKTELHELRS 113
Query: 116 RLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANP----------------- 158
RLV++LE++R+L RI + ++ KS+ G+KRA P
Sbjct: 114 RLVAELEQIRSLKDRIESGQLSTSNPRSHGKSKKLSGNKRATPSGSSKDPKKLPNGVDNR 173
Query: 159 -FGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDI 217
FGNP +N M+ C ++L KLMK K GW FNTPVD +L L DYH I
Sbjct: 174 NFGNPGGVGVKGII----GMENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQI 229
Query: 218 IKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
IK+PMDLGTV+S L N Y P EFA DVRLTFNNAL+YNPK V+ AE L A+FE M
Sbjct: 230 IKRPMDLGTVKSNLSNCFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDM 289
Query: 278 FQKL 281
F+ +
Sbjct: 290 FRPI 293
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 91/154 (59%), Gaps = 28/154 (18%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REMS+EEK LG L+ LPQE++ +L+ I++KRN L+ GDEIELDIEALD +TL
Sbjct: 414 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNE---HLAQDGDEIELDIEALDTETLW 470
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVA----------------VAVA-APVVIERS---- 395
+L RFV N+KK KT+++ + + + VA A AP E++
Sbjct: 471 ELDRFVTNWKKM-VSKTKRQALINNLGQPPSASAAASAATTTSVAEADAPSTSEKNDSFK 529
Query: 396 ---KKGDVAAEEEVDIGEEIPVQNYPPVVIERDD 426
K GD E++V+I ++ P ++PPV I++D+
Sbjct: 530 KPKKGGDAGDEDDVEIEDDEPATHFPPVEIDKDE 563
>gi|57282318|emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana
benthamiana]
Length = 613
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 122/197 (61%), Gaps = 14/197 (7%)
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRA 156
Y+T+N+ +Y++ EL DLR RLV++LE++RNL RI + ++ KS+ G+KR
Sbjct: 95 YMTYNVASYSKTELHDLRSRLVAELEQIRNLKDRIESGQLSTSNPRSHGKSKKLSGNKRP 154
Query: 157 NPFGNPK-AKRAAAGTXS-------------LTSTKNAMRRCGEILTKLMKDKQGWAFNT 202
P G+ K K+ G + + +N M+ C ++L KLMK K GW FNT
Sbjct: 155 TPSGSSKDPKKLPNGVDNRNFGNPGGGGVKGIIGMENMMKECRQVLGKLMKHKSGWIFNT 214
Query: 203 PVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHY 262
PVD +L L DY IIK+PMDLGTV+S L NN+Y P EFA DVRLTFNNAL+YNPK
Sbjct: 215 PVDAEALGLHDYRQIIKRPMDLGTVKSNLSNNLYPTPFEFAADVRLTFNNALLYNPKTDQ 274
Query: 263 VYAMAETLSAKFEQMFQ 279
V+ AE L +FE MF+
Sbjct: 275 VHVFAELLLTRFEDMFR 291
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 90/157 (57%), Gaps = 27/157 (17%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REMS+EEK LG L+ LPQE++ +L+ I++KRN L+ GDEIELDIEALD +TL
Sbjct: 416 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNE---HLAQDGDEIELDIEALDTETLW 472
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVA---------------VAVA-APVVIERS----- 395
+L RFV N+KK KT+++ + + + VA A P E++
Sbjct: 473 ELDRFVTNWKKM-VSKTKRQALINNLGQPPSASAAASAATTSVAEADGPSTSEKNDSFKK 531
Query: 396 --KKGDVAAEEEVDIGEEIPVQNYPPVVIERDDASSG 430
K GD E++V+I ++ P +PPV I++D+ G
Sbjct: 532 PKKGGDAGDEDDVEIEDDEPATQFPPVEIDKDEGGGG 568
>gi|125549798|gb|EAY95620.1| hypothetical protein OsI_17475 [Oryza sativa Indica Group]
Length = 456
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 208/426 (48%), Gaps = 88/426 (20%)
Query: 93 PESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGG 152
P S YV GA RE + LR RL +L +VR L +RI + + + G
Sbjct: 53 PPSSYVALRPGAMAHREARALRDRLAGELGQVRALIARI--------DTWQQGQVKRHGS 104
Query: 153 SKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLR 212
+R P P AK AA +RC +IL KL KDK+ FN PV+V L L
Sbjct: 105 PRRDLP--TPPAKLRAA----------MRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLH 152
Query: 213 DYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSA 272
DYH +IK PMDLGTVR+ L Y +FA DVRLTF+NAL YNP GH V+ A L A
Sbjct: 153 DYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLA 212
Query: 273 KFEQMF--------QKLS----------------------KQQQRQGILGRGKARE---- 298
FE+M+ Q+L K + + + KARE
Sbjct: 213 SFEKMYKASMSWFEQELKLLEPPMPVPPPELPPATAPVQVKPRAANVKMRKPKAREPNKR 272
Query: 299 -MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQ 357
M+LEEK L LE LP+E++ +L IV+KRN GN L G EIELDI+ +D +T +
Sbjct: 273 DMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRN-GNPELV--GGEIELDIDEMDVETQWE 329
Query: 358 LVRFVDNFKKAEKDKTEKEPMCS-------QVAVAVAAPVVIERS-----KKGDVAA--- 402
L RFV+NFKKA +K+ + + + +VA + +++ S GDV
Sbjct: 330 LDRFVNNFKKA-LNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATMVDNGDVTMAIE 388
Query: 403 --------------EEEVDIGEEIPVQNYPPVVIERDDASSGTSTSSTDSEDSSSSTSSG 448
+E VDIG+E+P Y V IE+D ++ + +SS+ SS + S
Sbjct: 389 SKDPDKITTQAEQLDEYVDIGDEMPTATYQSVEIEKDTEAASSGSSSSSDSGSSKDSVSE 448
Query: 449 SGSSSS 454
SG++ S
Sbjct: 449 SGNAHS 454
>gi|115460642|ref|NP_001053921.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|38344165|emb|CAE03496.2| OSJNBa0053K19.4 [Oryza sativa Japonica Group]
gi|38345713|emb|CAD41835.2| OSJNBb0085C12.15 [Oryza sativa Japonica Group]
gi|113565492|dbj|BAF15835.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|215695153|dbj|BAG90344.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 456
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 208/426 (48%), Gaps = 88/426 (20%)
Query: 93 PESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGG 152
P S YV GA RE + LR RL +L +VR L +RI + + + G
Sbjct: 53 PPSSYVALRPGAMAHREARALRDRLAGELGQVRALIARI--------DTWQQGQVKRHGS 104
Query: 153 SKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLR 212
+R P P AK AA +RC +IL KL KDK+ FN PV+V L L
Sbjct: 105 PRRDLP--TPPAKLRAA----------MRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLH 152
Query: 213 DYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSA 272
DYH +IK PMDLGTVR+ L Y +FA DVRLTF+NAL YNP GH V+ A L A
Sbjct: 153 DYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLA 212
Query: 273 KFEQMF--------QKLS----------------------KQQQRQGILGRGKARE---- 298
FE+M+ Q+L K + + + KARE
Sbjct: 213 SFEKMYKASMSWFEQELKLLEPPMPVPPPELPPATAPVQVKPRAANVKMRKPKAREPNKR 272
Query: 299 -MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQ 357
M+LEEK L LE LP+E++ +L IV+KRN GN L G EIELDI+ +D +T +
Sbjct: 273 DMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRN-GNPELV--GGEIELDIDEMDVETQWE 329
Query: 358 LVRFVDNFKKAEKDKTEKEPMCS-------QVAVAVAAPVVIERS-----KKGDVAA--- 402
L RFV+NFKKA +K+ + + + +VA + +++ S GDV
Sbjct: 330 LDRFVNNFKKA-LNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATMVDNGDVTMAIE 388
Query: 403 --------------EEEVDIGEEIPVQNYPPVVIERDDASSGTSTSSTDSEDSSSSTSSG 448
+E VDIG+E+P Y V IE+D ++ + +SS+ SS + S
Sbjct: 389 SKDPDKITTQAEQLDEYVDIGDEMPTATYQSVEIEKDTEAASSGSSSSSDSGSSKDSVSE 448
Query: 449 SGSSSS 454
SG++ S
Sbjct: 449 SGNAHS 454
>gi|297734375|emb|CBI15622.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 189/346 (54%), Gaps = 23/346 (6%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANP 158
+L +R E +DL +RL +L++VR +IA S ++ + + Q + KR P
Sbjct: 73 VLSLSKMSRAERRDLERRLKMELQQVRAFQKKIA-SLYKIQKSSEASTHQRK---KRPPP 128
Query: 159 FGN--PKAKRAAAGTXSL--------TSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVS 208
G PK KR +G TS M++C +L++LM + GW FN PVDVV
Sbjct: 129 PGRNVPKMKRGLSGRFESVKQAAPPGTSNSMLMKQCETLLSRLMTHQFGWIFNNPVDVVE 188
Query: 209 LRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAE 268
L++ DY +IK PMDLGT++SK+ + Y P +FA DVRLTF+NA+ YNP+G+ V+ MAE
Sbjct: 189 LKIPDYFTVIKHPMDLGTIKSKMASGEYLSPFDFAADVRLTFSNAMTYNPRGNDVHFMAE 248
Query: 269 TLSAKFEQMFQKLSKQQQR-----QGILGRGKAREMSLEEKMALGRSLEELPQEELGKLL 323
TL+ FE ++ + K+ + I R M+ EE+ LG LE L E ++
Sbjct: 249 TLNKFFEMRWKPIEKKLPKVAPTDHKIKMEPNKRIMTKEERHNLGTELETLLGELPDDIV 308
Query: 324 GIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF-KKAEKDKTEKEPMCSQV 382
+K+++ S DEIE+DI+AL +DTL L + +D + + +K+ T+ EP ++
Sbjct: 309 DFLKEQSFNENQAS--EDEIEIDIDALSDDTLFTLRKLLDGYLLEKQKNLTKTEPCEMEL 366
Query: 383 AVAVAAPVVIERSKKGDVAAEEEVDI-GEEIPVQNYPPVVIERDDA 427
+ KG+ +E+VDI G + P +YPP+ IE+D A
Sbjct: 367 RNESGFSNSSMQPCKGNDHLDEDVDIGGNDPPTSSYPPIEIEKDAA 412
>gi|350539095|ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding protein Virp1a [Solanum lycopersicum]
gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding protein Virp1b [Solanum lycopersicum]
gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding protein Virp1c [Solanum lycopersicum]
gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186134|emb|CAC33449.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186138|emb|CAC33451.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
Length = 602
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 153/320 (47%), Gaps = 66/320 (20%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKCNNPPLFQSK 60
MA A L SRNE W + T Y T+ N P N
Sbjct: 1 MASAVLASRNESSWAQSGGAGGGFMGKTP----------YSHTQLN--PNHN-------- 40
Query: 61 PNPNQNKETRAHDPTSNVHFKKTPTPAQPQS-------------------LPESDYVTFN 101
PNP + K+ + H ++ H +P Q S L Y+TFN
Sbjct: 41 PNP-KKKQKQFHHTSNGRHMDDSPAVTQTASDDAYSFNQRPIESTTNVDGLNFGGYLTFN 99
Query: 102 LGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANP--- 158
+ +Y + E+ +LR RL++++E++RNL RI + T+ KS+ + G+KR P
Sbjct: 100 VVSYNKAEVNELRSRLMAEVEQIRNLKDRIESGQLSTTNPRSQGKSKKQSGNKRPTPSGS 159
Query: 159 ---------------FGNPKAKRA--AAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFN 201
FGNP A GT S+ M+ C +IL KLMK K GW FN
Sbjct: 160 SKDLKKLPNGVENRNFGNPGGVDGVKAIGTESM------MKECRQILAKLMKHKNGWIFN 213
Query: 202 TPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGH 261
PVD +L L DYH IIK+PMDLGTV+S L N Y P EFA DVRLTFNNAL+YNPK
Sbjct: 214 IPVDAEALGLHDYHQIIKRPMDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTD 273
Query: 262 YVYAMAETLSAKFEQMFQKL 281
V A AE L +FE MF+ L
Sbjct: 274 QVNAFAEQLLGRFEDMFRPL 293
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 88/152 (57%), Gaps = 26/152 (17%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REM++EEK LG L+ LPQE++ +L+ I++KRN L+ GDEIELDIEALD +TL
Sbjct: 407 REMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNE---HLAQDGDEIELDIEALDTETLW 463
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVA--------------VAVA-APVVIER------S 395
+L RFV N+KK KT+++ + + + VA A P E+ +
Sbjct: 464 ELDRFVTNWKKM-VSKTKRQALMNNLGPPSASAAASAATTSVAEADGPTTSEKNDSFKKA 522
Query: 396 KKGDVAAEEEVDIGEEIPVQNYPPVVIERDDA 427
KKGDV E+ ++ P ++PPV IE+D+
Sbjct: 523 KKGDVGEEDVEIE-DDEPATHFPPVEIEKDEG 553
>gi|218187737|gb|EEC70164.1| hypothetical protein OsI_00884 [Oryza sativa Indica Group]
Length = 512
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 163/319 (51%), Gaps = 69/319 (21%)
Query: 112 DLRKRLVSDLERVRNLGSRIAN-------SDFQATHAYPTTKSQ---NRGGSKRANPFGN 161
+LR+RL ++L +VR R+++ S AT ++ SK+ NP N
Sbjct: 18 ELRRRLTAELAQVRATCKRLSSLPAPAPSSALSATDPSTPLPPHPPVSKHKSKKGNPSSN 77
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKP 221
P +A L + + CG +L +LMK K W FNTPVD +L L DYH II KP
Sbjct: 78 PGL--SAEARRKLYAP--VFKSCGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKP 133
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF--- 278
MDLGTV+S+L YK P+EFA DVRLTF NA+ YNPKG V+ MAE L FE+ +
Sbjct: 134 MDLGTVKSRLAAGHYKSPREFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEI 193
Query: 279 ----QKLSKQ-------------------------------------QQRQG---ILGRG 294
+LS Q +Q G +L +
Sbjct: 194 EAEVAQLSPQPPTPSSAAPRKPKEIDNSKVLERSDSTVHAAGMEATPKQNTGRPPVLKKP 253
Query: 295 KA-----REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEA 349
KA REM+ EK L +L+ELP E+L ++ I+KKRN SLS H DEIE+DI++
Sbjct: 254 KAREPNKREMTFWEKQRLSNNLQELPPEKLDNVVQIIKKRNL---SLSQHDDEIEVDIDS 310
Query: 350 LDNDTLSQLVRFVDNFKKA 368
D +TL +L RFV N+KK+
Sbjct: 311 FDVETLWELDRFVTNYKKS 329
>gi|449459556|ref|XP_004147512.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
gi|449511376|ref|XP_004163939.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
Length = 533
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 160/298 (53%), Gaps = 45/298 (15%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKCNNPPLFQSK 60
MA A L +RNE W +P+ N R T+ + K P S
Sbjct: 1 MASAVLANRNEANWPQPR-------------------GNGRGTEEGFMGKV---PF--SN 36
Query: 61 PNPNQNKETRAHDPTSNVHFKKTPTPAQPQS---------------LPESDYVTFNLGAY 105
PNP NK+ + H + +P Q S + S YV+FN+ +
Sbjct: 37 PNPKFNKK-QFHGEMNGFQMDDSPAVTQSASDDASSINHHRRLSNGVDFSQYVSFNVSSC 95
Query: 106 TRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAK 165
+R+EL +L+ RL+S+LE++R L SRI + + + + S+ G +KR P P +
Sbjct: 96 SRKELIELKTRLISELEQIRQLKSRINSGELHSRPKHQKKFSKTLG-TKR--PL--PTSS 150
Query: 166 RAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLG 225
S + N ++ C +ILTKLMK K GW FN PVDVV + L DY+DI+K+PMDLG
Sbjct: 151 NGMELKRSNSDNGNLLKACSQILTKLMKHKHGWIFNKPVDVVGMGLHDYYDIVKRPMDLG 210
Query: 226 TVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
+V+ KL + Y+ P +FA DVRLTF NA+ YNPKGH V+AMAE L +FE++F+ +++
Sbjct: 211 SVKVKLGKDAYESPYDFASDVRLTFKNAMTYNPKGHDVHAMAEQLLVRFEELFRPVAE 268
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 89/139 (64%), Gaps = 15/139 (10%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REM+LEEK LG L+ LP E++ +++ I+KKRN G L GDEIELDIEA+D +TL
Sbjct: 357 REMTLEEKHKLGIGLQSLPPEKMEQVVQIIKKRN---GHLKQDGDEIELDIEAVDTETLW 413
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVAV----AVAAPVVIE------RSKKGDVAAEEEV 406
+L R V N+KK K +++ + + ++ + P IE + +KG+ A EE+V
Sbjct: 414 ELDRLVTNWKKM-MSKIKRQALITAASMKPNGVMPTPEKIEVGSETKKQRKGE-AGEEDV 471
Query: 407 DIGEEIPVQNYPPVVIERD 425
DIG+E+P N+PPV IE+D
Sbjct: 472 DIGDEMPASNFPPVEIEKD 490
>gi|413919577|gb|AFW59509.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 195/423 (46%), Gaps = 114/423 (26%)
Query: 84 PTPAQPQSLPESD-----------YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIA 132
P+P+QP P +D YV F + RE + LR RL +L +VR L SRI
Sbjct: 31 PSPSQPH--PRADGSKSKPRAAAGYVKFRPASLGHREARALRDRLAVELGQVRALLSRID 88
Query: 133 NSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMR-RCGEILTKL 191
Q P ++ RG AMR RCG+IL++L
Sbjct: 89 TWQQQG----PPPRAVLRG----------------------------AMRKRCGQILSRL 116
Query: 192 MKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFN 251
KDK+ FN PV+V L L DYH +IK+PMDLGTV+ L Y +FA DVRLTF
Sbjct: 117 RKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASHDDFAADVRLTFT 176
Query: 252 NALVYNPKGHYVYAMAETLSAKFEQMFQK------------------------------- 280
NAL YNP GH V+ A L A FE+M+++
Sbjct: 177 NALRYNPVGHEVHTFAGALLAYFERMYKEALVCLEEERKRLEPPRPVAAELPPPPAVEPV 236
Query: 281 LSKQQQRQGILGRGK-------AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGN 333
+K + R G + K REMSLEEK L L LP+E++ +L IV+KRN+
Sbjct: 237 EAKAKTRAGNVRMRKPKAREPNKREMSLEEKNMLRLGLVSLPEEKMHNVLQIVRKRNNNP 296
Query: 334 GSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPVVIE 393
L GDEIELDI+ +D +T +L RFV NF KA K K+++ M + V + V E
Sbjct: 297 EML---GDEIELDIDEMDVETQWELDRFVTNFNKALK-KSQRAAMLNGGVADVTSTAVAE 352
Query: 394 --RSKKGDV----------------------AAEEEVDIGEEIPVQNYPPVVIERDDASS 429
+ GDV +E VDIG+E+P Y + IE+D +
Sbjct: 353 DDTAPVGDVPTLVGNDDAESEEPVKSTTVAEQVDEYVDIGDEMPAATYQSMEIEKD--AE 410
Query: 430 GTS 432
GT+
Sbjct: 411 GTT 413
>gi|57282314|emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
Length = 602
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 148/323 (45%), Gaps = 72/323 (22%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKCNNPPLFQSK 60
MA A L SRNE W + T P ++
Sbjct: 1 MASAVLASRNESSWAQSGGAGGGFMGKT--------------------------PFSHTQ 34
Query: 61 PNPNQN-----KETRAHDPTSNVHFKKTPTPAQPQS-------------------LPESD 96
NPN N K+ + H ++ H ++P Q S L
Sbjct: 35 LNPNHNPNPKKKQKQFHHTSNGRHIDESPAVTQTASDDAYSFNQRPIESTTNVDGLNFGG 94
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRA 156
Y+TFN+ +Y + E+ +LR RL++++E++RNL RI + T+ KS+ G+KR
Sbjct: 95 YLTFNVVSYNKGEVNELRSRLLAEVEQIRNLKDRIESGQLSTTNPRSQGKSKKLSGNKRP 154
Query: 157 NP------------------FGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGW 198
P FGNP G T++ M+ C +IL KLMK K GW
Sbjct: 155 TPSGSSKDPKKLPNGVENRNFGNP----VGGGGVKAIGTESMMKECRQILAKLMKHKNGW 210
Query: 199 AFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP 258
FN PVD +L L DYH IIK+P+DLGTV+S L N Y P EFA DVRLTFNNAL+YNP
Sbjct: 211 IFNIPVDAEALGLHDYHQIIKRPIDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNP 270
Query: 259 KGHYVYAMAETLSAKFEQMFQKL 281
K V AE L +FE MF+ L
Sbjct: 271 KTDQVNGFAEQLLGRFEDMFRPL 293
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 83/152 (54%), Gaps = 25/152 (16%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R M++EEK LG L+ LPQE++ +L+ I++KRN L+ GDEIELDIEALD +TL
Sbjct: 407 RVMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNE---HLAQDGDEIELDIEALDTETLW 463
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVA--------------VAVA-APVVIERS------ 395
+L RFV N+KK + M + + VA A P E++
Sbjct: 464 ELDRFVTNWKKMVSKTKRQALMINNLGPPSASAAASAATTSVAEADGPTTSEKNDSFKKP 523
Query: 396 KKGDVAAEEEVDIGEEIPVQNYPPVVIERDDA 427
KKGDV E+ ++ P ++PPV IE+D+
Sbjct: 524 KKGDVGEEDVEIE-DDEPATHFPPVEIEKDEG 554
>gi|255554567|ref|XP_002518322.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223542542|gb|EEF44082.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 634
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 160/293 (54%), Gaps = 25/293 (8%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKCNNPPL-FQS 59
MA A L +RNE W +P+ A+ + + + + PP+ F
Sbjct: 55 MASAVLANRNEANWTQPRGGAKFMGKVPFSNPNPNPNSKFSKKRQFQSAAAAPPPVNFDI 114
Query: 60 KPNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVS 119
P + D S+++ + T + S YVTFN+G+Y+++EL +L+ RLV+
Sbjct: 115 HP-------AASSDDASSINRRPAATASDFNS-----YVTFNIGSYSKKELLELKSRLVA 162
Query: 120 DLERVRNLGSRIANSDFQATHAYPTT--KSQNRG--GSKRANP-------FGNPKAKRAA 168
+LE++R L +RI +S + P K QN+ G+KR P F KR+
Sbjct: 163 ELEQIRQLKNRIDSSQSFQIRSTPNFNGKKQNKKVTGNKRPFPSATTNYGFVAKDVKRSD 222
Query: 169 AGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVR 228
S M++CG++LTKLMK K G+ FN PVDV + L DY +IIKKPMDLGTV+
Sbjct: 223 L-YNSHPENVQLMKKCGQMLTKLMKHKFGYIFNEPVDVERMNLHDYFEIIKKPMDLGTVK 281
Query: 229 SKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
KL +N Y+ P +FA DVRLTFNNA+ YNPKGH VY AE ++FE++F+ +
Sbjct: 282 KKLGSNEYESPIDFAADVRLTFNNAMKYNPKGHEVYTFAEQFLSRFEELFRPI 334
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 95/146 (65%), Gaps = 17/146 (11%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REMSLEEK LG L+ LPQE++ +++ I++KRN G L GDEIELDIEA+D +TL
Sbjct: 458 REMSLEEKHKLGVGLQSLPQEKMEQVVQIIRKRN---GHLRQDGDEIELDIEAVDTETLW 514
Query: 357 QLVRFVDNFKK-AEKDKTEK----EPMCSQVA-----VAVAAPVVI---ERSKKGDVAAE 403
+L RFV N+KK K K + P + V+ V+V + I ++ KKGD A +
Sbjct: 515 ELDRFVTNYKKMVSKIKRQALMGIAPTGNAVSEGNKDVSVNERIDITEAKKPKKGD-AGD 573
Query: 404 EEVDIGEEIPVQNYPPVVIERDDASS 429
E+VDIG+E+P+ ++PPV IE+D+ +
Sbjct: 574 EDVDIGDEMPMSSFPPVEIEKDNGHA 599
>gi|226493082|ref|NP_001142377.1| hypothetical protein [Zea mays]
gi|194708534|gb|ACF88351.1| unknown [Zea mays]
gi|414585390|tpg|DAA35961.1| TPA: hypothetical protein ZEAMMB73_681303 [Zea mays]
Length = 451
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 187/419 (44%), Gaps = 114/419 (27%)
Query: 84 PTPAQPQSLPESD----------------YVTFNLGAYTRRELKDLRKRLVSDLERVRNL 127
P P+QP P +D YVTF + RE + LR RL +L +VR L
Sbjct: 31 PNPSQPH--PRADGSKSKPRAAASSPAAGYVTFRPASLGPREARALRDRLAGELTQVRAL 88
Query: 128 GSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEI 187
SRI Q G P A +RCG+I
Sbjct: 89 LSRIDTWQQQ----------------------GPPPAGLRG----------EVRKRCGQI 116
Query: 188 LTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVR 247
LT+L KDK+ FN PV+V L L DYH +IK+PMDLGTV+ L Y +FA DVR
Sbjct: 117 LTRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASHDDFAADVR 176
Query: 248 LTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL-------------------------- 281
LTF NAL YNP GH V+ A L A FE+M+++
Sbjct: 177 LTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALACFEEDCKRPEPPRPVPPELTPPPA 236
Query: 282 -----SKQQQRQGILGRGK-------AREMSLEEKMALGRSLEELPQEELGKLLGIVKKR 329
+K + R G + K REMSLEEK L LE LP+E++ +L IV+KR
Sbjct: 237 AEPVEAKVKPRAGNVRMRKPKAREPNKREMSLEEKNMLRVGLESLPEEKMHNVLQIVRKR 296
Query: 330 NSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVA----VA 385
N+ L GDEIELDI+ +D +T +L RFV NF KA K M A A
Sbjct: 297 NNNPEML---GDEIELDIDEMDVETQWELDRFVANFNKALKKSQRAVVMNGGAADVTSAA 353
Query: 386 VA----APVV----------IERSKKGDVA-----AEEEVDIGEEIPVQNYPPVVIERD 425
VA APV +ER K A +E VDIG+E+P Y + IE+D
Sbjct: 354 VAENDTAPVSNVLTLVDNDDVEREKPVRSATMAEQVDEYVDIGDEMPTATYQSMEIEKD 412
>gi|57282322|emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
Length = 616
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 120/199 (60%), Gaps = 14/199 (7%)
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRA 156
Y+T+N +Y + EL +LR RLV++LE++RNL RI + ++ KS+ G+KR
Sbjct: 95 YMTYNXASYNKTELHELRSRLVAELEQIRNLKDRIESGQLSTSNPRSHGKSKKLSGNKRP 154
Query: 157 NPFGNPK-AKRAAAGTXS-------------LTSTKNAMRRCGEILTKLMKDKQGWAFNT 202
P G+ K K+ G + + +N M+ C ++L KLMK K GW FNT
Sbjct: 155 TPSGSSKDPKKLPNGVDNRNFGNPGGGGVKGIIGKENMMKECTQVLGKLMKHKSGWIFNT 214
Query: 203 PVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHY 262
PVD +L L DYH IIK+P DLGT +S L NN Y P EFA DVRLTFNNAL+YNPK
Sbjct: 215 PVDAEALGLHDYHQIIKRPXDLGTXKSNLSNNFYPTPFEFAADVRLTFNNALLYNPKTDQ 274
Query: 263 VYAMAETLSAKFEQMFQKL 281
V+ AE L A+FE MF+ +
Sbjct: 275 VHGFAEQLLARFEDMFRPI 293
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 28/158 (17%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REMS+EEK LG L+ LPQE++ +L+ I++KRN L+ GDEIELDIEALD +TL
Sbjct: 416 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNE---HLAQDGDEIELDIEALDTETLW 472
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVA----------------VAVA-APVVIERS---- 395
+L RFV N+KK KT+++ + + + VA A P E++
Sbjct: 473 ELDRFVTNWKKM-VSKTKRQALINNLGQPPSASAAASAATTTSVAEADGPSTSEKNDSFK 531
Query: 396 ---KKGDVAAEEEVDIGEEIPVQNYPPVVIERDDASSG 430
K GD E++V+I ++ P ++PPV IE D G
Sbjct: 532 KPKKGGDAGDEDDVEIEDDEPATHFPPVEIEIDKDEGG 569
>gi|449438275|ref|XP_004136914.1| PREDICTED: uncharacterized protein LOC101209352 [Cucumis sativus]
gi|449521741|ref|XP_004167888.1| PREDICTED: uncharacterized protein LOC101228592 [Cucumis sativus]
Length = 539
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 122/190 (64%), Gaps = 3/190 (1%)
Query: 95 SDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSK 154
S YV+FN+ + + R+L +LRKRL+ +LE+VR + SRI + + + Y S+ +G +K
Sbjct: 87 SQYVSFNITSCSGRDLFELRKRLLGELEQVRRIKSRIESGNISSGPNYLKKSSKTKGLNK 146
Query: 155 RANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDY 214
R P P + S N M+ C +IL KLMK K G FN PVDVV L L DY
Sbjct: 147 R--PKVLPSFGKDLQVPNSF-EVGNLMKTCAQILNKLMKQKYGLIFNKPVDVVGLGLHDY 203
Query: 215 HDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
+DIIK PMDLGTV+S L N+Y P +FAEDVRLTFNNA+ YNPKGH V+ +AE KF
Sbjct: 204 YDIIKHPMDLGTVKSTLSKNLYDSPLDFAEDVRLTFNNAMRYNPKGHEVHILAEQWLVKF 263
Query: 275 EQMFQKLSKQ 284
E+MF +S++
Sbjct: 264 EEMFLPVSRK 273
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 22/149 (14%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+MSLEEK LG L+ LP E++ +++ IVKKR+ G L GDEIELDIEA+D +TL
Sbjct: 356 RDMSLEEKHRLGIGLQGLPPEKMDQVIQIVKKRS---GHLRQDGDEIELDIEAVDTETLW 412
Query: 357 QLVRFVDNFKK----------------AEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDV 400
+L R V N+KK A+ +K E + S + ++ +KGDV
Sbjct: 413 ELDRLVTNWKKMMSKVKRQALINDNTNADSNKENNE-ISSVNEMMNEVKTEAKKLRKGDV 471
Query: 401 AAEEEVDIGEE-IPVQNYPPVVIERDDAS 428
EE+VDIG+E IP+ +PPV IERD A+
Sbjct: 472 G-EEDVDIGDEVIPMGGFPPVEIERDAAA 499
>gi|222617974|gb|EEE54106.1| hypothetical protein OsJ_00865 [Oryza sativa Japonica Group]
Length = 508
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 142/268 (52%), Gaps = 59/268 (22%)
Query: 153 SKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLR 212
SK+ NP NP +A L + + CG +L +LMK K W FNTPVD +L L
Sbjct: 119 SKKGNPSSNPGL--SAEARRKLYAP--VFKSCGALLARLMKHKHSWVFNTPVDASALGLH 174
Query: 213 DYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSA 272
DYH II KPMDLGTV+S+L YK P+EFA DVRLTF NA+ YNPKG V+ MAE L
Sbjct: 175 DYHTIITKPMDLGTVKSRLAAGHYKSPREFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLN 234
Query: 273 KFEQMF-------QKLSKQ-------------------------------------QQRQ 288
FE+ + +LS Q +Q
Sbjct: 235 MFEEKWPEIEAEVAQLSPQPPTPSSAAPRKPKEIDNSKVLERSDSTVHAAGMEATPKQNT 294
Query: 289 G---ILGRGKA-----REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHG 340
G +L + KA REM+ EK L +L+ELP E+L ++ I+KKRN SLS H
Sbjct: 295 GRPPVLKKPKAREPNKREMTFWEKQRLSNNLQELPPEKLDNVVQIIKKRNL---SLSQHD 351
Query: 341 DEIELDIEALDNDTLSQLVRFVDNFKKA 368
DEIE+DI++ D +TL +L RFV N+KK+
Sbjct: 352 DEIEVDIDSFDVETLWELDRFVTNYKKS 379
>gi|226530258|ref|NP_001151218.1| bromodomain containing protein [Zea mays]
gi|195645110|gb|ACG42023.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 190/416 (45%), Gaps = 112/416 (26%)
Query: 84 PTPAQPQSLPESD-----------YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIA 132
P+P+QP P +D YV F + RE + LR RL +L +VR L SRI
Sbjct: 31 PSPSQPH--PRADGSKSKPRAAAGYVKFRPASXGHREARALRDRLAVELGQVRALLSRID 88
Query: 133 NSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMR-RCGEILTKL 191
Q P ++ RG AMR RCG+IL++L
Sbjct: 89 TWQQQG----PPPRAVLRG----------------------------AMRKRCGQILSRL 116
Query: 192 MKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFN 251
KDK+ FN PV+V L L DYH +IK+PMDLGTV+ L Y +FA DVRLTF
Sbjct: 117 RKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASHDDFAADVRLTFT 176
Query: 252 NALVYNPKGHYVYAMAETLSAKFEQMFQK------------------------------- 280
NAL YNP GH V+ A L A FE+M+++
Sbjct: 177 NALRYNPVGHEVHTFAGALLAYFERMYKEALVCLEEERKRLEPPRPVAAELPPPPAVEPV 236
Query: 281 LSKQQQRQGILGRGK-------AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGN 333
+K + R G + K REMSLEEK L L LP+E++ +L IV+KRN+
Sbjct: 237 EAKAKTRAGNVRMRKPKAREPNKREMSLEEKNMLRLGLVSLPEEKMHNVLQIVRKRNNNP 296
Query: 334 GSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPVVIE 393
L GDEIELDI+ +D +T +L RFV NF KA K K+++ M + V + V E
Sbjct: 297 EML---GDEIELDIDEMDVETQWELDRFVTNFNKALK-KSQRAAMLNGGVADVTSTAVAE 352
Query: 394 --RSKKGDV----------------------AAEEEVDIGEEIPVQNYPPVVIERD 425
+ GDV +E VDIG+E+P + IE+D
Sbjct: 353 DDTAPVGDVPTLVGNDDAESEEPVKSTTVAEQVDEYVDIGDEMPAATNQSMEIEKD 408
>gi|296090258|emb|CBI40077.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 203/395 (51%), Gaps = 54/395 (13%)
Query: 109 ELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNP------ 162
E KDL RL +LE++R L ++ D Q T+ + S + K+ P GN
Sbjct: 74 ERKDLVLRLRMELEQIRLLQKKV---DLQRTNGVALSSSSDIL-RKKLEPLGNKNRAWNR 129
Query: 163 ----KAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDII 218
+ + A + T++ M++C +L +LM + GW FN PVD+V L + DY II
Sbjct: 130 GTSGRFESATQASAPSTASVLLMKQCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTII 189
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
K PMDLGT++ K+ + Y P +FA DVRLTF+NA +NP G+ V+ MA+TLS FE +
Sbjct: 190 KHPMDLGTIKGKIASGAYSSPLDFAADVRLTFSNAQTFNPPGNDVHKMADTLSKFFEVRW 249
Query: 279 QKLSKQ---QQRQGILGR---------------GKARE----------------MSLEEK 304
+ + K+ + Q + G+ K R+ M+ +EK
Sbjct: 250 KTIEKKLPVTKTQSLPGKYGTHGEMKTAKPMPPSKKRKVTSTHHEVIQEPVQKVMTADEK 309
Query: 305 MALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDN 364
LGR LE+L E +++ ++ +S NG + DEIE+DIEAL +DTL L + +D+
Sbjct: 310 RNLGRDLEDLLGEIPVQIIDFLRV-HSSNGRETGEDDEIEVDIEALSDDTLFTLRKLLDD 368
Query: 365 FKKAEKDKTEKEPMCSQVAVAVAAPVVIE-RSKKGDVAAEEEVDI-GEEIPVQNYPPVVI 422
+ + ++ K C + + P + KG+ EE++DI G E PV +YPPV I
Sbjct: 369 YLQEKQKSHGKAEPCEIELLHDSGPSNSSIQPCKGNDPVEEDIDIVGNEAPVSSYPPVEI 428
Query: 423 ERDDA--SSGTSTSSTDSE-DSSSSTSSGSGSSSS 454
E+D SS S + SE D+SSS S G+ +S
Sbjct: 429 EKDTEHRSSKCVLSRSFSEPDNSSSESELDGAKTS 463
>gi|302143389|emb|CBI21950.3| unnamed protein product [Vitis vinifera]
Length = 612
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 150/286 (52%), Gaps = 57/286 (19%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ CG +L +LMK K GW FN+PVDV L L DY II PMDLGTV+S+L N YK P+
Sbjct: 287 FKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPR 346
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ-----------QRQG 289
EFAEDVRLTF+NA+ YNPKG V+ MAE LS FE + + ++ + +
Sbjct: 347 EFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEAEKLPAPPPMLPSHEMRR 406
Query: 290 ILGRGKA---------------------------------REMSLEEKMALGRSLEELPQ 316
+L R ++ R+M+ EEK L +L+ LP
Sbjct: 407 VLDRSESMTYAVDPKIKPMNYTPLVRTPSLKKPKAKDPNKRDMTFEEKQKLSTNLQNLPS 466
Query: 317 EELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKE 376
E+L ++ I+K+ NS +L DEIE+DI+++D +TL +L R+V N+KK+ K
Sbjct: 467 EKLDNIVHIIKRNNS---ALCQDNDEIEVDIDSVDAETLWELDRYVTNYKKSLSKNKRKA 523
Query: 377 PMCSQVAVAV-------AAPVVIERSKKGDVAAEEEVDIGEEIPVQ 415
+ A A PVV E +++ ++ +E +I PVQ
Sbjct: 524 ELAQARAEAARKIQERNPVPVVTEAARETNI---DERNISSSSPVQ 566
>gi|357476127|ref|XP_003608349.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509404|gb|AES90546.1| Bromodomain-containing protein [Medicago truncatula]
Length = 533
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 154/293 (52%), Gaps = 49/293 (16%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKCNNPPLFQSK 60
MA A L +RNEP W +H A + N PK +N QS
Sbjct: 1 MASALLANRNEPNW-------LQHRGG---------GAEFMGKAPNPNPKFSNKKRTQSP 44
Query: 61 PNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSD 120
+ + R++D S YVTFN+ +Y++ EL DL+ RLVS+
Sbjct: 45 SDDASSINRRSND-------------------NHSQYVTFNIESYSKTELHDLKNRLVSE 85
Query: 121 LERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTK-- 178
L+++R L +RI + +F+ + + GSK+ + GN KR L +K
Sbjct: 86 LDQIRQLKTRIESGEFKPRLNHNGGGPNKKSGSKKFS--GN---KRPFPAEKELKKSKSE 140
Query: 179 --NAMRRCGEILTKLMKDKQG-----WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL 231
+AM+ CG+ILTKLMK+K G W FNTPV+ +L L DY DIIK PMDLGTV+SKL
Sbjct: 141 IGDAMKACGQILTKLMKNKSGWIFNTWIFNTPVNATALNLHDYFDIIKHPMDLGTVKSKL 200
Query: 232 ENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
N Y P EFA+DV+LTF NAL YNPKGH V A L KFE++++ + ++
Sbjct: 201 AKNAYSTPAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEK 253
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 20/150 (13%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REM++EEK LG L+ LP E++ +++ I++KRN G L GDEIELD+EA+D +TL
Sbjct: 349 REMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRN---GHLEQDGDEIELDMEAVDTETLW 405
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCS---------------QVAVAVAAPVVIERSKKGDVA 401
+L R V N+KK K +++ + + V P ++ KK D
Sbjct: 406 ELDRLVTNWKKM-VSKIKRQALMDNNNVPSNKGNGELPDREKVDATPPSEGKKQKKIDTV 464
Query: 402 AEEEVDIGEEIPVQNYPPVVIERDDASSGT 431
+E+VDIG+++P N+PPV IE+D T
Sbjct: 465 -DEDVDIGDDMPANNFPPVEIEKDKDMGAT 493
>gi|357476121|ref|XP_003608346.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509401|gb|AES90543.1| Bromodomain-containing protein [Medicago truncatula]
Length = 518
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 148/288 (51%), Gaps = 40/288 (13%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKCNNPPLFQSK 60
MA A L +RNEP W + R A V + N
Sbjct: 1 MASAVLANRNEPNWPQ-----HRGGGAGFMGKVPYANPN--------------------- 34
Query: 61 PNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSD 120
PNP + D S+++ + S YVTFN+ +Y++ EL +LR V++
Sbjct: 35 PNPKFKRNQSPSDDASSINRRSNDVVTN-----HSQYVTFNVSSYSKSELNELRNCFVTE 89
Query: 121 LERVRNLGSRIANSDFQATHAY----PTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTS 176
LE++R L +RI + + ++ ++ KS N+ S PF P K + S
Sbjct: 90 LEQIRQLQTRIESGELKSRSSHNGGGSAKKSANKKFSGNKRPF--PAEKELKRSKSEVGS 147
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
AM+ CG+IL KLMK K GW F++PVD V+L L DY DIIK PMDLGTV+SKL N Y
Sbjct: 148 ---AMKACGQILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAY 204
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
P EFA+DV+LTF NAL YNPKGH V A L KFE++++ + ++
Sbjct: 205 STPAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEK 252
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 314 LPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKK------ 367
LP E++ +++ I++KRN G L GDEIELD+EA+D +TL +L R V N+KK
Sbjct: 350 LPPEKMEQVVQIIRKRN---GHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIK 406
Query: 368 ---------AEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPVQNYP 418
+K E + + V P ++ KK D +E+VDIG+++P ++P
Sbjct: 407 RQALMDNNNVPSNKGNGE-LPDREKVDATPPSEGKKQKKIDTV-DEDVDIGDDMPANDFP 464
Query: 419 PVVIERDDASSGT 431
PV IE+D GT
Sbjct: 465 PVEIEKDKDMGGT 477
>gi|327488240|sp|Q9LXA7.2|GTE2_ARATH RecName: Full=Transcription factor GTE2; AltName:
Full=Bromodomain-containing protein GTE2; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E2
Length = 581
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 120/217 (55%), Gaps = 22/217 (10%)
Query: 96 DYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRG---- 151
DYV+F+L YT +L++L+KRL S+LE VR L RI + F + Y T G
Sbjct: 68 DYVSFDLDGYTSNQLRELKKRLNSELEEVRFLRERIESGTFVSGSVYTTQARSFAGETND 127
Query: 152 ---------------GSKRANPFGN--PKAKR-AAAGTXSLTSTKNAMRRCGEILTKLMK 193
G KR+NPF P KR A S K+ M CG+IL KLMK
Sbjct: 128 VGVKKTKTKKKKIGHGQKRSNPFATDEPSLKRHVALDLMSEKVLKSMMTTCGQILVKLMK 187
Query: 194 DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNA 253
K W F PVDVV L L DYH I+ KPMDLGTV+ LE +Y+ P +FA DVRLTF NA
Sbjct: 188 HKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPIDFASDVRLTFTNA 247
Query: 254 LVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI 290
+ YNPKG VY MAE L ++F+ F K+ + Q +
Sbjct: 248 MSYNPKGQDVYLMAEKLLSQFDVWFNPTLKRFEAQEV 284
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 95/150 (63%), Gaps = 16/150 (10%)
Query: 287 RQGILGRGKA-----REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGD 341
R+G L + KA REM+++EK LG +L+ELP E+LG+L+ I++KR L GD
Sbjct: 382 RKGKLPKPKAKDPNKREMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTR---DLPQDGD 438
Query: 342 EIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVA-VAAPVVIE------R 394
EIELDIEALDN+TL +L RFV N++K K +++ V+ P V E R
Sbjct: 439 EIELDIEALDNETLWELDRFVTNYRKM-ASKIKRQGFIQNVSTPPRNMPPVTEMGSAEKR 497
Query: 395 SKKGDVAAEEEVDIGEEIPVQNYPPVVIER 424
+KG A EE+VDIGE+IPV++YP V IER
Sbjct: 498 GRKGGEAGEEDVDIGEDIPVEDYPSVEIER 527
>gi|297789895|ref|XP_002862870.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
gi|297308629|gb|EFH39129.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 128/236 (54%), Gaps = 37/236 (15%)
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAY-----PTTKS---- 147
Y TFN+ YT +L++L+KR S+LE++R L RI + F+ AY P +S
Sbjct: 67 YATFNIAGYTSNQLRELKKRFTSELEQIRILRERIESGTFETQQAYTIPEVPAVRSAPLN 126
Query: 148 -----------------QNRGGSKRANPF--GNPKAKRAAAGTXSLTSTKNAMRRCGEIL 188
+N G KR+N F +P++++ AG + CG+IL
Sbjct: 127 SFAGEKNDLGPKKKKQKKNVSGLKRSNQFTDSDPESEKLLAGM---------LNTCGQIL 177
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
KLMK K W FNTPVDVV L L DYH ++KKPMDLGTV+ L+ Y P +FA DVRL
Sbjct: 178 VKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATDVRL 237
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEK 304
TFNNA+ YNPKG VY MA+ L F+ MF K+ + Q + G + + E K
Sbjct: 238 TFNNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKFEAQQLKLTGSSSRLEPEVK 293
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 33/144 (22%)
Query: 287 RQGILGRGKARE-----MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGD 341
R+G L + KA++ M++E+K LG +L++LP E+LG+L+ I++KRN
Sbjct: 378 RKGKLPKPKAKDPNKRLMTIEQKSKLGMNLQDLPPEKLGQLVQILRKRNG---------- 427
Query: 342 EIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVA 401
L D S + ++ T M S +R+++GD A
Sbjct: 428 -------HLAQDAKSSGKGLSGTCQLPPRNMTSVAEMGS----------AEKRTRRGD-A 469
Query: 402 AEEEVDIGEEIPVQNYPPVVIERD 425
EE+VDIGE+IP+++YP V IERD
Sbjct: 470 GEEDVDIGEDIPIEDYPSVEIERD 493
>gi|357166043|ref|XP_003580578.1| PREDICTED: transcription factor GTE7-like [Brachypodium distachyon]
Length = 458
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 179/385 (46%), Gaps = 79/385 (20%)
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRA 156
Y+TF RE LR RL +L +VR L SRI + Q S+R
Sbjct: 55 YLTFKPSELAHREAAALRGRLAGELGQVRALLSRID----ALQQEQQQQQQQREEPSQRK 110
Query: 157 NPFGNPKAKRAAAGTXSLTSTKNAMR-RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYH 215
+ P AK + AMR RC +IL +L KDK+ FN PV+V L L DYH
Sbjct: 111 DLRPPPPAK-----------LRVAMRKRCAQILARLQKDKRSIWFNAPVEVERLGLHDYH 159
Query: 216 DIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
+IK PMDLGTVR++L Y FA DVRLTF+NAL YNP GH V+ A L A FE
Sbjct: 160 AVIKSPMDLGTVRARLAAKAYPSHDAFAADVRLTFSNALRYNPAGHDVHIFAGDLLASFE 219
Query: 276 QMFQ-------------------------------KLSKQQQRQGILGRGKA-----REM 299
+M++ ++ + R + + KA REM
Sbjct: 220 KMYRAAVSWFEEECKRLAPPPPMPVAAELPPPPVVVPAQVKPRAARMRKPKAREPNKREM 279
Query: 300 SLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLV 359
SL+EK L LE LP+E++ +L IV+KRN L GDEIELDI+ +D +T +L
Sbjct: 280 SLDEKNMLREGLESLPEEKMHNVLQIVRKRNVNPALL---GDEIELDIDEMDIETQWELD 336
Query: 360 RFVDNFKKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVA------------------ 401
RFV+NF KA +K+ + M + V V E + GDV
Sbjct: 337 RFVNNFNKA-LNKSRRAAMMNGDGAVVNNATVTE-AVNGDVLTLVDNADAESENPEKSTL 394
Query: 402 ----AEEEVDIGEEIPVQNYPPVVI 422
+E VDI +EIP Y V I
Sbjct: 395 VTEQVDEYVDIEDEIPTATYQSVEI 419
>gi|356508786|ref|XP_003523135.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 781
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 192/395 (48%), Gaps = 68/395 (17%)
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRI-----------ANSDFQATHA---Y 142
+ F+L A + E KDL+ RL +LE+VR +I +SD + A
Sbjct: 95 FQHFSLSAMSGFERKDLKVRLTWELEQVREFRKKIDGMNSNVVGLSLSSDIMSCSAGQKR 154
Query: 143 PTTKSQNR-------GGSKRANP-FGNPKAKRAAAG-------TXSLTSTKNAMRRCGEI 187
P +SQ+R G KR P PK K++ +G +TS M+ C +
Sbjct: 155 PKLESQHRTMEVSVPHGKKRPLPGHTGPKLKKSMSGHLEYAKPAAPVTSYATLMKLCENV 214
Query: 188 LTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVR 247
L +LM + GW FNTPVDVV L + DY +IK PMDLGTV+ ++ + Y P +FA DVR
Sbjct: 215 LNRLMSHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGEYSNPMDFAADVR 274
Query: 248 LTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ----------------------- 284
LTF NA+ YNP G+ V+ MAETLS FE ++ + K+
Sbjct: 275 LTFENAMFYNPAGNDVHIMAETLSKFFETRWKAIEKKIPAIDSVASEPSRPTHVETEISD 334
Query: 285 ----QQRQGILGRGK-------AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGN 333
+++ I R M++EEK L LE + E + +++++
Sbjct: 335 RVPPTKKKKITPNDTNVKPEPVKRIMTVEEKQKLSLELETMIGELPDSISDFLREQSYNE 394
Query: 334 GSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCS-QVAVAVAAPVVI 392
G + + DEIE+DI+AL +DTL +L + +D++ ++ K C ++
Sbjct: 395 GQI--NDDEIEIDIDALSDDTLFKLRKLLDDYMLEKQKSLAKAGQCEMELLNESGFSNSS 452
Query: 393 ERSKKGDVAAEEEVDI--GEEIPVQNYPPVVIERD 425
+ KG+ EE+VDI G + P+ NYPP+ IE+D
Sbjct: 453 MQPHKGEEQVEEDVDIIGGNDPPISNYPPLEIEKD 487
>gi|297797597|ref|XP_002866683.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
gi|297312518|gb|EFH42942.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
Length = 577
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 127/236 (53%), Gaps = 37/236 (15%)
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAY-----PTTKS---- 147
Y TFN+ YT +L++L+KR S+LE++R L RI + F+ AY P +S
Sbjct: 67 YATFNIAGYTSNQLRELKKRFTSELEQIRILRERIESGTFETQQAYTIPEVPAVRSAPLN 126
Query: 148 -----------------QNRGGSKRANPFG--NPKAKRAAAGTXSLTSTKNAMRRCGEIL 188
+N G KR N F +P++++ AG + CG+IL
Sbjct: 127 SFAGEKNDLGPKKKKQKKNVSGLKRGNQFATSDPESEKLLAGM---------LNTCGQIL 177
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
KLMK K W FNTPVDVV L L DYH ++KKPMDLGTV+ L+ Y P +FA DVRL
Sbjct: 178 VKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATDVRL 237
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEK 304
TFNNA+ YNPKG VY MA+ L F+ MF K+ + Q + G + + E K
Sbjct: 238 TFNNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKFEAQQLKLTGSSSRLEPEVK 293
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 102/151 (67%), Gaps = 17/151 (11%)
Query: 287 RQGILGRGKARE-----MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGD 341
R+G L + KA++ M++EEK LG +L++LP E+LG+L+ I++KRN G L+ GD
Sbjct: 378 RKGKLPKPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQLVQILRKRN---GHLAQDGD 434
Query: 342 EIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAV------AVAAPVVIE-R 394
EIELDIEA+DN+TL +L RFV N+KK K +++ V+ +VA E R
Sbjct: 435 EIELDIEAVDNETLWELDRFVTNYKKM-ASKIKRQGFIRNVSTPPRNMTSVAEMGSAEKR 493
Query: 395 SKKGDVAAEEEVDIGEEIPVQNYPPVVIERD 425
+++GD A EE+VDIGE+IP+++YP V IERD
Sbjct: 494 TRRGD-AGEEDVDIGEDIPIEDYPSVEIERD 523
>gi|357476123|ref|XP_003608347.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509402|gb|AES90544.1| Bromodomain-containing protein [Medicago truncatula]
Length = 390
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 122/194 (62%), Gaps = 9/194 (4%)
Query: 95 SDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAY----PTTKSQNR 150
S YVTFN+ +Y++ EL +LR V++LE++R L +RI + + ++ ++ KS N+
Sbjct: 64 SQYVTFNVSSYSKSELNELRNCFVTELEQIRQLQTRIESGELKSRSSHNGGGSAKKSANK 123
Query: 151 GGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLR 210
S PF P K + S AM+ CG+IL KLMK K GW F++PVD V+L
Sbjct: 124 KFSGNKRPF--PAEKELKRSKSEVGS---AMKACGQILQKLMKTKIGWIFSSPVDPVALN 178
Query: 211 LRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETL 270
L DY DIIK PMDLGTV+SKL N Y P EFA+DV+LTF NAL YNPKGH V A L
Sbjct: 179 LHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGHDVNTAAMQL 238
Query: 271 SAKFEQMFQKLSKQ 284
KFE++++ + ++
Sbjct: 239 LEKFEELYRPIQEK 252
>gi|15238195|ref|NP_196617.1| global transcription factor group E2 [Arabidopsis thaliana]
gi|7671448|emb|CAB89388.1| bromodomain protein-like [Arabidopsis thaliana]
gi|332004179|gb|AED91562.1| global transcription factor group E2 [Arabidopsis thaliana]
Length = 678
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 120/217 (55%), Gaps = 22/217 (10%)
Query: 96 DYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRG---- 151
DYV+F+L YT +L++L+KRL S+LE VR L RI + F + Y T G
Sbjct: 143 DYVSFDLDGYTSNQLRELKKRLNSELEEVRFLRERIESGTFVSGSVYTTQARSFAGETND 202
Query: 152 ---------------GSKRANPFGN--PKAKR-AAAGTXSLTSTKNAMRRCGEILTKLMK 193
G KR+NPF P KR A S K+ M CG+IL KLMK
Sbjct: 203 VGVKKTKTKKKKIGHGQKRSNPFATDEPSLKRHVALDLMSEKVLKSMMTTCGQILVKLMK 262
Query: 194 DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNA 253
K W F PVDVV L L DYH I+ KPMDLGTV+ LE +Y+ P +FA DVRLTF NA
Sbjct: 263 HKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPIDFASDVRLTFTNA 322
Query: 254 LVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI 290
+ YNPKG VY MAE L ++F+ F K+ + Q +
Sbjct: 323 MSYNPKGQDVYLMAEKLLSQFDVWFNPTLKRFEAQEV 359
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 95/150 (63%), Gaps = 16/150 (10%)
Query: 287 RQGILGRGKA-----REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGD 341
R+G L + KA REM+++EK LG +L+ELP E+LG+L+ I++KR L GD
Sbjct: 457 RKGKLPKPKAKDPNKREMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTR---DLPQDGD 513
Query: 342 EIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVA-VAAPVVIE------R 394
EIELDIEALDN+TL +L RFV N++K K +++ V+ P V E R
Sbjct: 514 EIELDIEALDNETLWELDRFVTNYRKM-ASKIKRQGFIQNVSTPPRNMPPVTEMGSAEKR 572
Query: 395 SKKGDVAAEEEVDIGEEIPVQNYPPVVIER 424
+KG A EE+VDIGE+IPV++YP V IER
Sbjct: 573 GRKGGEAGEEDVDIGEDIPVEDYPSVEIER 602
>gi|217074676|gb|ACJ85698.1| unknown [Medicago truncatula]
Length = 471
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 153/293 (52%), Gaps = 49/293 (16%)
Query: 1 MAPAALPSRNEPCWGEPKVYARRHSSATTTTTVATSAANYRDTKNNNIPKCNNPPLFQSK 60
MA A L +RNEP W +H A + N PK +N QS
Sbjct: 1 MASALLANRNEPNW-------LQHRGG---------GAEFMGKAPNPNPKFSNKKRTQSP 44
Query: 61 PNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSD 120
+ + R++D S YVTFN+ +Y++ EL DL+ RLVS+
Sbjct: 45 SDDASSINRRSND-------------------NHSQYVTFNIESYSKTELHDLKNRLVSE 85
Query: 121 LERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTK-- 178
L+++R +RI + +F+ + + GSK+ + GN KR L +K
Sbjct: 86 LDQIRQHKTRIESGEFKPRLNHNGGGPNKKSGSKKFS--GN---KRPFPAEKELKKSKSE 140
Query: 179 --NAMRRCGEILTKLMKDKQG-----WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL 231
+AM+ CG+ILTKLMK+K G W FNTPV+ +L L DY DIIK PMDLGTV+SKL
Sbjct: 141 IGDAMKACGQILTKLMKNKSGWIFNTWIFNTPVNATALNLHDYFDIIKHPMDLGTVKSKL 200
Query: 232 ENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
N Y P EFA+DV+LTF NAL YNPKGH V A L KFE++++ + ++
Sbjct: 201 AKNAYSTPAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEK 253
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REM++EEK LG L+ LP E++ +++ I++KRN G L GDEIELD+EA+D +TL
Sbjct: 349 REMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRN---GHLEQDGDEIELDMEAVDTETLW 405
Query: 357 QLVRFVDNFKK 367
+L R V N+KK
Sbjct: 406 ELDRLVTNWKK 416
>gi|413947734|gb|AFW80383.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
gi|413947735|gb|AFW80384.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
Length = 490
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 163/340 (47%), Gaps = 70/340 (20%)
Query: 146 KSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVD 205
KS+ GG+ P + +A+R + C +L +LMK K W FNTPVD
Sbjct: 103 KSRKPGGAPYPQPHLSAEARRKLYAP--------VFKTCSALLQRLMKHKHSWVFNTPVD 154
Query: 206 VVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYA 265
+L L DYH II KPMDLGTV+SKL Y+ P+EFA DVRLTF NA+ YNPKG V+
Sbjct: 155 ASALGLHDYHTIITKPMDLGTVKSKLAAGQYRSPREFAGDVRLTFRNAMTYNPKGQDVHF 214
Query: 266 MAETLSAKFEQMF-------QKLSKQ---------------------------------- 284
MAE L FE+ + +LS Q
Sbjct: 215 MAEQLLNMFEEKWLEIEAELAQLSPQPPTPSSAAPRKPKEIDNSRALERSDSTVHAAGME 274
Query: 285 ------QQRQGILGRGKARE-----MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGN 333
R + + KARE M+ EK L +L++LP E+L ++ I+KKRNS
Sbjct: 275 ATPKTHNGRPPVSKKPKAREPNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNS-- 332
Query: 334 GSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA---EKDKTEKEPMCSQVAVAVAAPV 390
SL+ H DEIE+DI++ D +TL +L RFV N++K+ K K E + A P
Sbjct: 333 -SLNQHDDEIEVDIDSFDVETLWELDRFVTNYRKSITKNKRKAELSAVRPDEADPDQEPE 391
Query: 391 VIERSKKGDVAAEEEVDIGEEIP----VQNYPPVVIERDD 426
+ER ++ + + + E IP V PP I DD
Sbjct: 392 KVERVRQDEADQDRIPAVQEPIPEPESVDVEPPKEIAADD 431
>gi|356560521|ref|XP_003548540.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 740
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 192/399 (48%), Gaps = 86/399 (21%)
Query: 101 NLGAYTRRELKDLRKRLVSDLERVRNLGSRI-----------ANSDFQATH--------- 140
NL R+EL D RL S+LE++R RI + +D ++
Sbjct: 70 NLAPLQRKELVD---RLTSELEQIRVFRKRIELQRMNDVMLSSKNDIISSRRNDHNGPQV 126
Query: 141 --------AYPTTKSQNRGGSKRANPFG-NPKAKRAAAGTXSLTSTKNA--MRRCGEILT 189
+ P +S+ G S++ + K +A SL S NA M+ C +L
Sbjct: 127 ERKPSMSSSVPGNESKPLGQSQKPREWNRGSSGKFESATRTSLLSAANALLMKDCELLLK 186
Query: 190 KLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLT 249
+LM + GW F TPVDVV L+L DY IIK PMDLGTV+SK+ Y P EFA+DVRLT
Sbjct: 187 RLMSHQYGWVFKTPVDVVKLKLPDYFSIIKHPMDLGTVKSKIAAGEYAGPIEFADDVRLT 246
Query: 250 FNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR---------------------- 287
F+NA++YNP+G+ V+ MA+TLS FE ++ + K+ R
Sbjct: 247 FSNAMIYNPRGNDVHVMADTLSKYFELRWKAIEKKLPRRDDVPFPSKPDTYVIKTTRPMP 306
Query: 288 ------------QGILGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGS 335
Q ++ + MS +EK LG LE L E ++ +K+ N NG
Sbjct: 307 PSKKRKISTLPCQPVVMPPAKKVMSDQEKHNLGIELESLLGEMPMHIIDFLKE-NCSNGE 365
Query: 336 LSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAV--------AVA 387
C DE+E+DI+ L +DTL L + +D+F EK E + ++ V +
Sbjct: 366 -ECGEDELEIDIDDLKDDTLFALRKLLDDF-LLEKQMNETKVEVREIEVLNDSGPSNSSL 423
Query: 388 APVVIERSKKGDVAAEEEVDI-GEEIPVQNYPPVVIERD 425
P KG+ + +EEVDI G E PV +YPPV IE+D
Sbjct: 424 LPF------KGNDSDDEEVDIGGNEPPVSSYPPVEIEKD 456
>gi|168003377|ref|XP_001754389.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694491|gb|EDQ80839.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 694
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 129/236 (54%), Gaps = 51/236 (21%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+++C +L KLM K GW FN PVD L L DYH IIKKPMDLGT++ KL Y P
Sbjct: 252 LKQCMTLLRKLMTHKHGWVFNEPVDAEKLGLHDYHSIIKKPMDLGTIKKKLHLKQYASPL 311
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ----MFQKLSKQQQRQG------- 289
EF ED+RLTF+NA+ YNP GH VY MAE L FE+ M +K+ ++++R G
Sbjct: 312 EFGEDIRLTFSNAMTYNPVGHDVYVMAELLKNMFEEWWKNMGRKVEEERRRCGKEEEMLA 371
Query: 290 --------------------ILGRGKA-----------------REMSLEEKMALGRSLE 312
L RGKA R M+ EEK L +LE
Sbjct: 372 NDEDSVEESGEVRRGERDVVSLTRGKASSRMGSQPKPRPEEVGKRAMTFEEKRKLSVNLE 431
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
LP ++L +++ I+KKRN L + DEIE+DI++ DNDTL +L RFV N+ K+
Sbjct: 432 RLPGDKLERIVQIIKKRNP---DLGQNEDEIEVDIDSFDNDTLWELDRFVTNYMKS 484
>gi|414875721|tpg|DAA52852.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 490
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 145/290 (50%), Gaps = 60/290 (20%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ C +L++LMK K W FN PVD +L L DYH II KPMDLGTV+SKL YK P+
Sbjct: 128 FKTCAALLSRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKLGAGQYKSPR 187
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF-------QKLSKQQQ------- 286
EFA DVRLTF NA+ YNPKG V+ MAE L FE+ + +LS Q
Sbjct: 188 EFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIEAEIAQLSPQPPTPSSAAP 247
Query: 287 -----------------------------------RQGILGRGKARE-----MSLEEKMA 306
R +L + KARE M+ EK
Sbjct: 248 KKPKPKEIDNSRPLERSDSTVHAAGIEATPKTHTGRPQVLKKPKAREPNKRDMTFWEKQR 307
Query: 307 LGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFK 366
L +L++LP E+L ++ I+KKRN SLS H DEIE+DI++ D +TL +L RFV N++
Sbjct: 308 LSNNLQDLPPEKLDNVVQIIKKRNL---SLSQHDDEIEVDIDSFDVETLWELDRFVTNYR 364
Query: 367 KA---EKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIP 413
K+ K K E + A P +E ++G ++ + E IP
Sbjct: 365 KSITKNKRKAELSAVRPDEADPDQEPEKVEHVRQGKADQDQIPAVQEPIP 414
>gi|226493721|ref|NP_001146156.1| uncharacterized protein LOC100279725 [Zea mays]
gi|219885991|gb|ACL53370.1| unknown [Zea mays]
gi|413921106|gb|AFW61038.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 484
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 199/443 (44%), Gaps = 105/443 (23%)
Query: 61 PNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPE---------SDYVTFNLGAYTRRELK 111
P P+ N R H N + +P +P++ P S ++ F T E +
Sbjct: 31 PKPSSNPNPRRHRAGPNP--IPSGSPPEPRAAPAVAAEPSPSPSGHLNFRPSEMTPAEAR 88
Query: 112 DLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGT 171
LR RL S+L RVR SRI S G +R P + A G
Sbjct: 89 HLRARLTSELCRVRAFLSRI--------------DSWQDGQRRRRGP------EPPARGP 128
Query: 172 XSLTSTKNAMR-RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSK 230
+ AMR RC +IL +L + K+ FN+PVDV L+L DY II+ PMDLGTV+
Sbjct: 129 SPPPALVEAMRKRCADILMRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQN 188
Query: 231 LENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK--QQQRQ 288
L Y + FA DVRLTFNNAL YNP H+V+ A L A FE M+++ +QQRQ
Sbjct: 189 LTAGRYPSHEAFAGDVRLTFNNALRYNPPDHHVHRYAGNLLASFEGMYKEAVSWFEQQRQ 248
Query: 289 GI--------------------------LGRG-----------KAREMSLEEKMALGRSL 311
+ +G G REM EEK L +
Sbjct: 249 QLEPPMQPDLPPPPQLPVVSVPVQAPPRMGGGGRRPKPKAREPNKREMDEEEKQKLRVEI 308
Query: 312 EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKD 371
E LP+E++ +L IV+KRNS + G+ +ELD + LD +TL +L RFV N++KA K
Sbjct: 309 ENLPEEKMLNVLQIVQKRNS---DPAFTGEVVELDFDELDMETLWELDRFVVNWRKALK- 364
Query: 372 KTEKEPMCSQVAV----------------------AVAAPVVIERSKKGDVAAEE----- 404
K+++ M + A AV V +E + DV +E
Sbjct: 365 KSQRNSMVNGDAAAAVNGDAIDVTVVPDDDDMVEVAVNPSVAVEIGESADVPEKEMEAEM 424
Query: 405 ---EVDIGEEIPVQNYPPVVIER 424
VDIG+E+P NY V IER
Sbjct: 425 VDDYVDIGDEMPTVNYQSVEIER 447
>gi|42568797|ref|NP_201366.3| global transcription factor group E7 [Arabidopsis thaliana]
gi|75146221|sp|Q7Y214.1|GTE7_ARATH RecName: Full=Transcription factor GTE7; AltName:
Full=Bromodomain-containing protein GTE7; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E7
gi|30793995|gb|AAP40447.1| unknown protein [Arabidopsis thaliana]
gi|110742049|dbj|BAE98957.1| hypothetical protein [Arabidopsis thaliana]
gi|133778882|gb|ABO38781.1| At5g65630 [Arabidopsis thaliana]
gi|332010696|gb|AED98079.1| global transcription factor group E7 [Arabidopsis thaliana]
Length = 590
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 122/222 (54%), Gaps = 37/222 (16%)
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAY-----PTTKS---- 147
Y TFNL YT +L++L+KR S+L+++R L RI + F+ Y P +S
Sbjct: 67 YATFNLAGYTSSQLRELKKRFTSELKQIRILRERIESGTFETQQGYTIPEVPAVRSAPLN 126
Query: 148 -----------------QNRGGSKRANPFG--NPKAKRAAAGTXSLTSTKNAMRRCGEIL 188
+N G KR+N FG +P++++ AG + C +IL
Sbjct: 127 NFTGEKNDLGPKKKKQKKNVSGLKRSNQFGPSDPESEKLLAGM---------LNTCSQIL 177
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
KLMK K W FNTPVDVV L L DYH ++KKPMDLGTV+ L+ Y P +FA DVRL
Sbjct: 178 VKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATDVRL 237
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI 290
TF+NA+ YNPKG VY MA+ L F+ MF K+ + Q +
Sbjct: 238 TFDNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKFEAQQL 279
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 102/151 (67%), Gaps = 17/151 (11%)
Query: 287 RQGILGRGKARE-----MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGD 341
R+G L + KA++ M++EEK LG +L++LP E+LG+LL I++KRN G L+ GD
Sbjct: 387 RKGKLPKPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRN---GHLAQDGD 443
Query: 342 EIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAV------AVAAPVVIE-R 394
EIELDIEA+DN+TL +L RFV N+KK K +++ V+ +VA E R
Sbjct: 444 EIELDIEAVDNETLWELDRFVTNYKKM-ASKIKRQGFIRNVSTPPRNMASVAEMGSAEKR 502
Query: 395 SKKGDVAAEEEVDIGEEIPVQNYPPVVIERD 425
+++GD A EE+VDIGE+IP+++YP V IERD
Sbjct: 503 TRRGD-AGEEDVDIGEDIPIEDYPSVEIERD 532
>gi|8978291|dbj|BAA98182.1| unnamed protein product [Arabidopsis thaliana]
Length = 643
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 122/222 (54%), Gaps = 37/222 (16%)
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAY-----PTTKS---- 147
Y TFNL YT +L++L+KR S+L+++R L RI + F+ Y P +S
Sbjct: 122 YATFNLAGYTSSQLRELKKRFTSELKQIRILRERIESGTFETQQGYTIPEVPAVRSAPLN 181
Query: 148 -----------------QNRGGSKRANPFG--NPKAKRAAAGTXSLTSTKNAMRRCGEIL 188
+N G KR+N FG +P++++ AG + C +IL
Sbjct: 182 NFTGEKNDLGPKKKKQKKNVSGLKRSNQFGPSDPESEKLLAGM---------LNTCSQIL 232
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
KLMK K W FNTPVDVV L L DYH ++KKPMDLGTV+ L+ Y P +FA DVRL
Sbjct: 233 VKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATDVRL 292
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI 290
TF+NA+ YNPKG VY MA+ L F+ MF K+ + Q +
Sbjct: 293 TFDNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKFEAQQL 334
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 102/151 (67%), Gaps = 17/151 (11%)
Query: 287 RQGILGRGKARE-----MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGD 341
R+G L + KA++ M++EEK LG +L++LP E+LG+LL I++KRN G L+ GD
Sbjct: 442 RKGKLPKPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRN---GHLAQDGD 498
Query: 342 EIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAV------AVAAPVVIE-R 394
EIELDIEA+DN+TL +L RFV N+KK K +++ V+ +VA E R
Sbjct: 499 EIELDIEAVDNETLWELDRFVTNYKKM-ASKIKRQGFIRNVSTPPRNMASVAEMGSAEKR 557
Query: 395 SKKGDVAAEEEVDIGEEIPVQNYPPVVIERD 425
+++GD A EE+VDIGE+IP+++YP V IERD
Sbjct: 558 TRRGD-AGEEDVDIGEDIPIEDYPSVEIERD 587
>gi|242055997|ref|XP_002457144.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
gi|241929119|gb|EES02264.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
Length = 482
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 127/240 (52%), Gaps = 55/240 (22%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ C +L +LMK K W FN PVD +L L DYH II KPMDLGTV+SKL YK P+
Sbjct: 138 FKTCSVLLQRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKLGAGQYKSPR 197
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF-------QKLSKQQQ------- 286
EFA DVRLTF NA+ YNPKG V+ MAE L FE+ + +LS Q
Sbjct: 198 EFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIEAEVAQLSPQPPTPSSAAP 257
Query: 287 ---------------------------------RQGILGRGKARE-----MSLEEKMALG 308
R +L + KARE M+ EK L
Sbjct: 258 RKPKEIDNSRVLERSDSTVHAAAMEATPKTHTGRPPVLKKPKAREPNKRDMTFWEKQRLS 317
Query: 309 RSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
+L++LP E+L ++ I+KKRN SLS H DEIE+DI++ D +TL +L RFV N++K+
Sbjct: 318 NNLQDLPPEKLDNVVQIIKKRNL---SLSQHDDEIEVDIDSFDVETLWELDRFVTNYRKS 374
>gi|115475161|ref|NP_001061177.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|40253661|dbj|BAD05604.1| putative RNA-binding protein Virp1a [Oryza sativa Japonica Group]
gi|113623146|dbj|BAF23091.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|215678743|dbj|BAG95180.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765310|dbj|BAG87007.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767863|dbj|BAH00092.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640052|gb|EEE68184.1| hypothetical protein OsJ_26323 [Oryza sativa Japonica Group]
Length = 481
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 187/407 (45%), Gaps = 88/407 (21%)
Query: 83 TPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAY 142
T P+ P P S +VT +RRE + LR RL +L RVR L S I ++A
Sbjct: 60 TVAPSVPDPSP-SGHVTIRPSELSRREAQVLRARLTGELSRVRALLSDI--DGWEARRRR 116
Query: 143 PTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNT 202
P + RG P A +AA +RC +ILT+L K K FN+
Sbjct: 117 PAEPPRQRGH------VSPPPALQAAM-----------RKRCTQILTRLRKQKISVWFNS 159
Query: 203 PVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHY 262
PVDV L+L DYH II+ PMDLGTV+ L Y + FA DVRLTF+NAL YNP H+
Sbjct: 160 PVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEAFATDVRLTFSNALRYNPADHH 219
Query: 263 VYAMAETLSAKFEQMFQK----LSKQQQRQG------------------------ILGRG 294
V+ A L A FE ++++ ++ QR I G G
Sbjct: 220 VHRYASNLLATFEGLYKEALSWFEQECQRLEPPMPLALPPPPQPPVPMPMQAPPRIGGGG 279
Query: 295 K----------AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIE 344
+ REMS EEK L + LP+E++G +L IV+KRN+ + G+ +E
Sbjct: 280 RRPKPKAREPNKREMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNTDPALM---GEVVE 336
Query: 345 LDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAA---------------P 389
LD + +D +TL +L RFV N KKA M A A P
Sbjct: 337 LDFDEMDVETLWELDRFVVNCKKALSKSRRTVAMNGDAVDATAIVPTEDDTVQVNVHHQP 396
Query: 390 VVIE-----------RSKKGDVAAEEEVDIGEEIPVQNYPPVVIERD 425
V+E R + D+ +E VDIG+E+P NY V IERD
Sbjct: 397 SVVEIGDSENDTPEKRVSEVDM-VDEYVDIGDEMPTANYQSVEIERD 442
>gi|218200605|gb|EEC83032.1| hypothetical protein OsI_28113 [Oryza sativa Indica Group]
Length = 481
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 186/407 (45%), Gaps = 88/407 (21%)
Query: 83 TPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAY 142
T P P P S +VT +RRE + LR RL +L RVR L S I ++A
Sbjct: 60 TVAPFVPDPSP-SGHVTIRPSELSRREAQVLRARLTGELSRVRALLSEI--DGWEARRRR 116
Query: 143 PTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNT 202
P + RG P A +AA +RC +ILT+L K K FN+
Sbjct: 117 PAEPPRQRGH------VSPPPALQAAM-----------RKRCTQILTRLRKQKISVWFNS 159
Query: 203 PVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHY 262
PVDV L+L DYH II+ PMDLGTV+ L Y + FA DVRLTF+NAL YNP H+
Sbjct: 160 PVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEAFAADVRLTFSNALRYNPADHH 219
Query: 263 VYAMAETLSAKFEQMFQK----LSKQQQRQG------------------------ILGRG 294
V+ A L A FE ++++ ++ QR I G G
Sbjct: 220 VHRYASNLLATFEGLYKEALSWFEQECQRLEPPMPLALPPPPQPPVPMPMQAPPRIGGGG 279
Query: 295 K----------AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIE 344
+ REMS EEK L + LP+E++G +L IV+KRN+ + G+ +E
Sbjct: 280 RRPKPKAREPNKREMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNTDPALM---GEVVE 336
Query: 345 LDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAA---------------P 389
LD + +D +TL +L RFV N KKA M A A P
Sbjct: 337 LDFDEMDVETLWELDRFVVNCKKALSKSRRTVAMNGDAVDATAIVPIEDDTVQVNVHHQP 396
Query: 390 VVIE-----------RSKKGDVAAEEEVDIGEEIPVQNYPPVVIERD 425
V+E R + D+ +E VDIG+E+P NY V IERD
Sbjct: 397 SVVEIGDSENDTPEKRVSEVDM-VDEYVDIGDEMPTANYQSVEIERD 442
>gi|15219397|ref|NP_177458.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
gi|75194105|sp|Q9S7T1.1|GTE3_ARATH RecName: Full=Transcription factor GTE3, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE3; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E3;
Flags: Precursor
gi|5903104|gb|AAD55662.1|AC008017_35 Highly similar to non intermediate filament IFA binding protein
[Arabidopsis thaliana]
gi|12324313|gb|AAG52122.1|AC010556_4 hypothetical protein; 61711-63380 [Arabidopsis thaliana]
gi|56236042|gb|AAV84477.1| At1g73150 [Arabidopsis thaliana]
gi|332197298|gb|AEE35419.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
Length = 461
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 126/208 (60%), Gaps = 18/208 (8%)
Query: 84 PTPAQPQSLPESD---YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRI--ANSDFQA 138
PT A SL D + +L + ++ E+++L+++L ++LE VR+L R+ ++F
Sbjct: 31 PTVANSNSLGLEDNHQMMKISLSSISKLEVRNLKRKLQAELEEVRSLIKRLEPQGNNFAP 90
Query: 139 THAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGW 198
P K + G K+ G AAA T ++ C +LTKLMK K GW
Sbjct: 91 V---PNKKLKTANGGKKGGVHG------AAADK----GTVQILKSCNNLLTKLMKHKSGW 137
Query: 199 AFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP 258
FNTPVDVV+L L DYH+IIK+PMDLGTV+++L ++YK P EFAEDVRLTFNNA++YNP
Sbjct: 138 IFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSKSLYKSPLEFAEDVRLTFNNAMLYNP 197
Query: 259 KGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
GH VY MAE L FE+ + L Q +
Sbjct: 198 VGHDVYHMAEILLNLFEEKWVPLETQYE 225
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+++ +EK L L++LP ++L ++ I+KKR LS DEIELDI++LD +TL
Sbjct: 306 RDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRTP---ELSQQDDEIELDIDSLDLETLW 362
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQ 381
+L RFV +K++ K E++ + S+
Sbjct: 363 ELFRFVTEYKESLSKKKEEQGLDSE 387
>gi|414875719|tpg|DAA52850.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
gi|414875720|tpg|DAA52851.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 948
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 145/290 (50%), Gaps = 60/290 (20%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ C +L++LMK K W FN PVD +L L DYH II KPMDLGTV+SKL YK P+
Sbjct: 128 FKTCAALLSRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKLGAGQYKSPR 187
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF-------QKLSKQ--------- 284
EFA DVRLTF NA+ YNPKG V+ MAE L FE+ + +LS Q
Sbjct: 188 EFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIEAEIAQLSPQPPTPSSAAP 247
Query: 285 ---------------------------------QQRQGILGRGKARE-----MSLEEKMA 306
R +L + KARE M+ EK
Sbjct: 248 KKPKPKEIDNSRPLERSDSTVHAAGIEATPKTHTGRPQVLKKPKAREPNKRDMTFWEKQR 307
Query: 307 LGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFK 366
L +L++LP E+L ++ I+KKRN SLS H DEIE+DI++ D +TL +L RFV N++
Sbjct: 308 LSNNLQDLPPEKLDNVVQIIKKRNL---SLSQHDDEIEVDIDSFDVETLWELDRFVTNYR 364
Query: 367 KA---EKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIP 413
K+ K K E + A P +E ++G ++ + E IP
Sbjct: 365 KSITKNKRKAELSAVRPDEADPDQEPEKVEHVRQGKADQDQIPAVQEPIP 414
>gi|359488601|ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [Vitis vinifera]
Length = 739
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 187/385 (48%), Gaps = 72/385 (18%)
Query: 109 ELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPT----------------------TK 146
E KDL RL +LE++R L ++ D Q T+ +
Sbjct: 74 ERKDLVLRLRMELEQIRLLQKKV---DLQRTNGVALSSSSDILSCSNGQRGHVDNGRKSS 130
Query: 147 SQNRGGSKRANPFGNP----------KAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ 196
+ G K+ P GN + + A + T++ M++C +L +LM +
Sbjct: 131 ALTSGPGKKLEPLGNKNRAWNRGTSGRFESATQASAPSTASVLLMKQCETLLKQLMSHQH 190
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
GW FN PVD+V L + DY IIK PMDLGT++ K+ + Y P +FA DVRLTF+NA +
Sbjct: 191 GWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIKGKIASGAYSSPLDFAADVRLTFSNAQTF 250
Query: 257 NPKGHYVYAMAETLSAKFEQMFQKLSKQ---QQRQGILGR---------------GKARE 298
NP G+ V+ MA+TLS FE ++ + K+ + Q + G+ K R+
Sbjct: 251 NPPGNDVHKMADTLSKFFEVRWKTIEKKLPVTKTQSLPGKYGTHGEMKTAKPMPPSKKRK 310
Query: 299 ----------------MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDE 342
M+ +EK LGR LE+L E +++ ++ +S NG + DE
Sbjct: 311 VTSTHHEVIQEPVQKVMTADEKRNLGRDLEDLLGEIPVQIIDFLRV-HSSNGRETGEDDE 369
Query: 343 IELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPVVIE-RSKKGDVA 401
IE+DIEAL +DTL L + +D++ + ++ K C + + P + KG+
Sbjct: 370 IEVDIEALSDDTLFTLRKLLDDYLQEKQKSHGKAEPCEIELLHDSGPSNSSIQPCKGNDP 429
Query: 402 AEEEVDI-GEEIPVQNYPPVVIERD 425
EE++DI G E PV +YPPV IE+D
Sbjct: 430 VEEDIDIVGNEAPVSSYPPVEIEKD 454
>gi|222422933|dbj|BAH19453.1| AT5G14270 [Arabidopsis thaliana]
Length = 549
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 190/398 (47%), Gaps = 61/398 (15%)
Query: 98 VTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRAN 157
+ L + + K+L +RL +LE++R + +F+ + T S + G R
Sbjct: 50 MVLPLSGLSSSDRKELIRRLRQELEQIR-----VFQKNFELSRTVALT-SSSASGLTRVK 103
Query: 158 PFG------------NPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVD 205
FG NP + A+ T T+ M++C +L +LM + GW FNTPVD
Sbjct: 104 SFGMSRCSTGPGKTVNPISA-ASKPTPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVD 162
Query: 206 VVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYA 265
VV L + DY ++I+ PMDLGTV++KL + Y CP EFA DVRLTF+NA+ YNP G+ VY
Sbjct: 163 VVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYV 222
Query: 266 MAETLSAKFEQMFQKLSKQ----------------QQRQGILGRGKA------------- 296
MA+TL FE ++ L K+ +++ ++ A
Sbjct: 223 MADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDAHKEKHIVIPVPMAKKRKTTAVDCENV 282
Query: 297 -----REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALD 351
R M+ E+++ LG+ LE L E +L+ ++ NS G + DEIE+DI L
Sbjct: 283 VDPAKRVMTDEDRLKLGKDLESL-TEFPAQLINFLRDHNSNEGGIG--DDEIEIDINDLS 339
Query: 352 NDTLSQLVRFVD-NFKKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGE 410
+ L QL +D + ++ + K+ EP ++ + G +E VDIGE
Sbjct: 340 DHALFQLRDLLDEHLREIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDIGE 399
Query: 411 -EIPVQNYPPVVIERDDA---SSGTSTSSTDSEDSSSS 444
E P + PV IE+D S+G S S + SS
Sbjct: 400 NEHPTSSISPVTIEKDLVLGNSNGNSLGSVSGDPKMSS 437
>gi|302764766|ref|XP_002965804.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
gi|300166618|gb|EFJ33224.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
Length = 706
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 169/326 (51%), Gaps = 58/326 (17%)
Query: 160 GNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIK 219
G+ KR + + M++CG +L KL+ K W FN PVD V L L DYH +I+
Sbjct: 93 GDIDNKRQRVELARMKRMGDIMKQCGTLLKKLITHKHAWVFNEPVDAVKLGLHDYHKVIR 152
Query: 220 KPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF- 278
+PMDLGT++ KLE Y+ P EFA+DV+LTF+NA+ YNP GH V+ MA+ L F++ +
Sbjct: 153 RPMDLGTIKKKLEGGHYRTPVEFADDVKLTFSNAMTYNPPGHDVFIMADILRQIFDERWR 212
Query: 279 ---QKLSKQQQ------------------------RQGILG---------------RGK- 295
+KL ++Q +Q +L RG
Sbjct: 213 CIKEKLEEEQTKCRVEDEVFAEIAQGNPNPALQNLKQSLLSIEDQLSSLKKPAGAPRGSK 272
Query: 296 ---AREMSLEEKMALGRSLEEL----PQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIE 348
R+M+ EEK LG++LE++ P ++ +++ ++KK N +LS D IE+DI+
Sbjct: 273 KSGKRQMTYEEKTELGKNLEKVLEQNPGDKADEIVLLLKKHNP---NLSQSEDTIEVDID 329
Query: 349 ALDNDTLSQLVRFVDN-FKKAEKDKTEKEPMCSQVAVAVAAPV-VIERSKKGDVAAEEEV 406
+DNDTL +L + V + K K + +P AP ++S+K +E+V
Sbjct: 330 GIDNDTLWELHKMVASCMKPKNKKRPRPQPAEGIKQTGGTAPGDSPKKSRKSGEGLDEDV 389
Query: 407 DI-GE-EIPVQNYPPVVIERDDASSG 430
DI GE ++P NY PVV+++D + G
Sbjct: 390 DIDGEDDMPTANYSPVVVDKDTPNDG 415
>gi|7573452|emb|CAB87766.1| kinase-like protein [Arabidopsis thaliana]
Length = 703
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 196/410 (47%), Gaps = 67/410 (16%)
Query: 98 VTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRAN 157
+ L + + K+L +RL +LE++R + +F+ + T S + G R
Sbjct: 50 MVLPLSGLSSSDRKELIRRLRQELEQIR-----VFQKNFELSRTVALT-SSSASGLTRVK 103
Query: 158 PFG------------NPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVD 205
FG NP + A+ T T+ M++C +L +LM + GW FNTPVD
Sbjct: 104 SFGMSRCSTGPGKTVNPISA-ASKPTPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVD 162
Query: 206 VVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYA 265
VV L + DY ++I+ PMDLGTV++KL + Y CP EFA DVRLTF+NA+ YNP G+ VY
Sbjct: 163 VVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYV 222
Query: 266 MAETLSAKFEQMFQKLSKQ----------------QQRQGILGRGKA------------- 296
MA+TL FE ++ L K+ +++ ++ A
Sbjct: 223 MADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDAHKEKHIVIPVPMAKKRKTTAVDCENV 282
Query: 297 -----REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALD 351
R M+ E+++ LG+ LE L E +L+ ++ NS G + DEIE+DI L
Sbjct: 283 VDPAKRVMTDEDRLKLGKDLESL-TEFPAQLINFLRDHNSNEGGIG--DDEIEIDINDLS 339
Query: 352 NDTLSQLVRFVD-NFKKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGE 410
+ L QL +D + ++ + K+ EP ++ + G +E VDIGE
Sbjct: 340 DHALFQLRDLLDEHLREIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDIGE 399
Query: 411 -EIPVQNYPPVVIERD-------DASSGTST--SSTDSEDSSSSTSSGSG 450
E P + PV IE+D D G +T SS D+ + +S S SG
Sbjct: 400 NEHPTSSISPVTIEKDLVLGNSNDYPLGCTTDCSSFDAYNLGNSLGSVSG 449
>gi|359491054|ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE10-like
[Vitis vinifera]
Length = 770
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 190/397 (47%), Gaps = 70/397 (17%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTT------------- 145
+L +R E +DL +RL +L++VR +IA+ PT+
Sbjct: 99 VLSLSKMSRAERRDLERRLKMELQQVRAFQKKIASLCSNLVPLSPTSDIRSCSNGQKRPP 158
Query: 146 --------KSQNRGGSKRANPFGN--PKAKRAAAGTXSL--------TSTKNAMRRCGEI 187
++ KR P G PK KR +G TS M++C +
Sbjct: 159 KDKIQKSSEASTHQRKKRPPPPGRNVPKMKRGLSGRFESVKQAAPPGTSNSMLMKQCETL 218
Query: 188 LTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVR 247
L++LM + GW FN PVDVV L++ DY +IK PMDLGT++SK+ + Y P +FA DVR
Sbjct: 219 LSRLMTHQFGWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGEYLSPFDFAADVR 278
Query: 248 LTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ----QRQGILGRGKA------- 296
LTF+NA+ YNP+G+ V+ MAETL+ FE ++ + K+ + + R A
Sbjct: 279 LTFSNAMTYNPRGNDVHFMAETLNKFFEMRWKPIEKKLPVTIDVESLPSRSDAHLEIETA 338
Query: 297 ------------------------REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSG 332
R M+ EE+ LG LE L E ++ +K+++
Sbjct: 339 DRMPPSKKKKVAPTDHKIKMEPNKRIMTKEERHNLGTELETLLGELPDDIVDFLKEQSFN 398
Query: 333 NGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF-KKAEKDKTEKEPMCSQVAVAVAAPVV 391
S DEIE+DI+AL +DTL L + +D + + +K+ T+ EP ++
Sbjct: 399 ENQAS--EDEIEIDIDALSDDTLFTLRKLLDGYLLEKQKNLTKTEPCEMELRNESGFSNS 456
Query: 392 IERSKKGDVAAEEEVDI-GEEIPVQNYPPVVIERDDA 427
+ KG+ +E+VDI G + P +YPP+ IE+D A
Sbjct: 457 SMQPCKGNDHLDEDVDIGGNDPPTSSYPPIEIEKDAA 493
>gi|449492943|ref|XP_004159148.1| PREDICTED: transcription factor GTE9-like [Cucumis sativus]
Length = 491
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 181/340 (53%), Gaps = 44/340 (12%)
Query: 148 QNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVV 207
+ +G S+ A+ P A+ + + T + TS M++C ++L ++M + W FNTPVDVV
Sbjct: 105 KGQGSSRVASDKVGPAAQASVSNTSTATSAI-LMKQCEQLLKRVMSHQYAWVFNTPVDVV 163
Query: 208 SLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMA 267
L L DY IIK PMDLGTV+SKL + Y P +F DVRLTF+NA+ YNP G+ V+ MA
Sbjct: 164 KLNLPDYFTIIKHPMDLGTVKSKLSSGAYSSPLDFLADVRLTFSNAMTYNPPGNDVHVMA 223
Query: 268 ETLSAKFEQMFQKLSKQQQR---QGILGRGKARE-------------------------- 298
+ L++ F+ ++ + K+ + + + + RE
Sbjct: 224 DVLNSYFDMRWKAIEKKLPKTDGHSLPTKSRPREDVETVKNVPLKKMKVASRPQEVTPIP 283
Query: 299 ----MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
M+ EEK++LGR LE L E ++ +++++SG C DE E+DI+ L +DT
Sbjct: 284 SKLVMTDEEKLSLGRELESLLGEMPLHIIDFLREQSSGGR--ECGEDEFEIDIDDLSDDT 341
Query: 355 LSQLVRFVDN-FKKAEKDKTEKEPMCSQVAVAVAAPV---VIERSKKGDVAAEEEVDIGE 410
L +L + +D+ F++ +K+ EP ++ + + V ++ SK + E+ G
Sbjct: 342 LFKLRKLLDDHFQEKQKNNASAEPCVIELQMLNDSGVSNSSMQPSKGSEPIDEDLNGGGN 401
Query: 411 EIPVQNYPPVVIERD--DA--SSGTSTSSTDSEDSSSSTS 446
E PV + P+ IER DA + TSS +S+DS SS S
Sbjct: 402 EAPVSSCAPMEIERSAMDAIHRNRKCTSSRNSKDSDSSCS 441
>gi|297807455|ref|XP_002871611.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
gi|297317448|gb|EFH47870.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
Length = 690
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 180/371 (48%), Gaps = 56/371 (15%)
Query: 102 LGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGN 161
L + + K+L RL +LE++R F+ + + T S + G RA FG
Sbjct: 54 LSGLSSSDRKELILRLRQELEQIR-----FFQKSFEISRSV-TLTSSSASGLTRAKSFGK 107
Query: 162 PKAKR-----------AAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLR 210
+ AA T T+ M++C +L +LM + GW FNTPVDVV L
Sbjct: 108 SRCSTGPGKTVNPLSAAAKPTPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLN 167
Query: 211 LRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETL 270
+ DY ++IK PMDLGTV++KL + Y CP EFA DVRLTF+NA+ YNP G+ V+ MA+TL
Sbjct: 168 ILDYFNVIKHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVFVMADTL 227
Query: 271 SAKFEQMFQKLSKQ----------------QQRQGILGRGKA------------------ 296
FE ++ L K+ +++ ++ A
Sbjct: 228 RKFFEVRWKTLEKKLSGIKVHTEPSNSDAHEEKHIVIPVPMAKKRKTSAVDCENVSEPVK 287
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R M+ E+++ LG+ LE L E +L+ ++ NS G + DEIE+DI L + L
Sbjct: 288 RVMTDEDRLKLGKDLESL-TEFPAQLINFLRDHNSNEGGIG--DDEIEIDINDLSHHALF 344
Query: 357 QLVRFVD-NFKKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGE-EIPV 414
QL +D + ++++ K+ EP ++ + + G +E +DIG+ E P
Sbjct: 345 QLRDLLDEHLRESQNKKSSVEPCEIELLHGSVPGNSLMQHCDGSELDDEVIDIGKNEHPK 404
Query: 415 QNYPPVVIERD 425
+ PV IE+D
Sbjct: 405 SSISPVTIEKD 415
>gi|449455878|ref|XP_004145677.1| PREDICTED: transcription factor GTE8-like [Cucumis sativus]
Length = 750
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 181/340 (53%), Gaps = 44/340 (12%)
Query: 148 QNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVV 207
+ +G S+ A+ P A+ + + T + TS M++C ++L ++M + W FNTPVDVV
Sbjct: 154 KGQGSSRVASDKVGPAAQASVSNTSTATSAI-LMKQCEQLLKRVMSHQYAWVFNTPVDVV 212
Query: 208 SLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMA 267
L L DY IIK PMDLGTV+SKL + Y P +F DVRLTF+NA+ YNP G+ V+ MA
Sbjct: 213 KLNLPDYFTIIKHPMDLGTVKSKLSSGAYSSPLDFLADVRLTFSNAMTYNPPGNDVHVMA 272
Query: 268 ETLSAKFEQMFQKLSKQQQR---QGILGRGKARE-------------------------- 298
+ L++ F+ ++ + K+ + + + + RE
Sbjct: 273 DVLNSYFDMRWKAIEKKLPKTDGHSLPTKSRPREDVETVKNVPLKKMKVASRPQEVTPIP 332
Query: 299 ----MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
M+ EEK++LGR LE L E ++ +++++SG C DE E+DI+ L +DT
Sbjct: 333 SKLVMTDEEKLSLGRELESLLGEMPLHIIDFLREQSSGGR--ECGEDEFEIDIDDLSDDT 390
Query: 355 LSQLVRFVDN-FKKAEKDKTEKEPMCSQVAVAVAAPV---VIERSKKGDVAAEEEVDIGE 410
L +L + +D+ F++ +K+ EP ++ + + V ++ SK + E+ G
Sbjct: 391 LFKLRKLLDDHFQEKQKNNASAEPCVIELQMLNDSGVSNSSMQPSKGSEPIDEDLNGGGN 450
Query: 411 EIPVQNYPPVVIERD--DA--SSGTSTSSTDSEDSSSSTS 446
E PV + P+ IER DA + TSS +S+DS SS S
Sbjct: 451 EAPVSSCAPMEIERSAMDAIHRNRKCTSSRNSKDSDSSCS 490
>gi|18417335|ref|NP_568297.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|75163656|sp|Q93YS6.1|GTE9_ARATH RecName: Full=Transcription factor GTE9; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 9; Short=AtBET9;
AltName: Full=Bromodomain-containing protein GTE9;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E9
gi|16604681|gb|AAL24133.1| putative kinase [Arabidopsis thaliana]
gi|332004627|gb|AED92010.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 688
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 190/398 (47%), Gaps = 61/398 (15%)
Query: 98 VTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRAN 157
+ L + + K+L +RL +LE++R + +F+ + T S + G R
Sbjct: 50 MVLPLSGLSSSDRKELIRRLRQELEQIR-----VFQKNFELSRTVALT-SSSASGLTRVK 103
Query: 158 PFG------------NPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVD 205
FG NP + A+ T T+ M++C +L +LM + GW FNTPVD
Sbjct: 104 SFGMSRCSTGPGKTVNPISA-ASKPTPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVD 162
Query: 206 VVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYA 265
VV L + DY ++I+ PMDLGTV++KL + Y CP EFA DVRLTF+NA+ YNP G+ VY
Sbjct: 163 VVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYV 222
Query: 266 MAETLSAKFEQMFQKLSKQ----------------QQRQGILGRGKA------------- 296
MA+TL FE ++ L K+ +++ ++ A
Sbjct: 223 MADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDAHKEKHIVIPVPMAKKRKTTAVDCENV 282
Query: 297 -----REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALD 351
R M+ E+++ LG+ LE L E +L+ ++ NS G + DEIE+DI L
Sbjct: 283 VDPAKRVMTDEDRLKLGKDLESL-TEFPAQLINFLRDHNSNEGGIG--DDEIEIDINDLS 339
Query: 352 NDTLSQLVRFVD-NFKKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGE 410
+ L QL +D + ++ + K+ EP ++ + G +E VDIGE
Sbjct: 340 DHALFQLRDLLDEHLREIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDIGE 399
Query: 411 -EIPVQNYPPVVIERDDA---SSGTSTSSTDSEDSSSS 444
E P + PV IE+D S+G S S + SS
Sbjct: 400 NEHPTSSISPVTIEKDLVLGNSNGNSLGSVSGDPKMSS 437
>gi|334187679|ref|NP_001190308.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|332004628|gb|AED92011.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 689
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 194/408 (47%), Gaps = 64/408 (15%)
Query: 98 VTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRAN 157
+ L + + K+L +RL +LE++R + +F+ + T S + G R
Sbjct: 50 MVLPLSGLSSSDRKELIRRLRQELEQIR-----VFQKNFELSRTVALT-SSSASGLTRVK 103
Query: 158 PFG------------NPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVD 205
FG NP + A+ T T+ M++C +L +LM + GW FNTPVD
Sbjct: 104 SFGMSRCSTGPGKTVNPISA-ASKPTPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVD 162
Query: 206 VVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYA 265
VV L + DY ++I+ PMDLGTV++KL + Y CP EFA DVRLTF+NA+ YNP G+ VY
Sbjct: 163 VVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYV 222
Query: 266 MAETLSAKFEQMFQKLSKQ----------------QQRQGILGRGKA------------- 296
MA+TL FE ++ L K+ +++ ++ A
Sbjct: 223 MADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDAHKEKHIVIPVPMAKKRKTTAVDCENV 282
Query: 297 -----REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALD 351
R M+ E+++ LG+ LE L E +L+ ++ NS G + DEIE+DI L
Sbjct: 283 VDPAKRVMTDEDRLKLGKDLESL-TEFPAQLINFLRDHNSNEGGIG--DDEIEIDINDLS 339
Query: 352 NDTLSQLVRFVD-NFKKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGE 410
+ L QL +D + ++ + K+ EP ++ + G +E VDIGE
Sbjct: 340 DHALFQLRDLLDEHLREIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDIGE 399
Query: 411 -EIPVQNYPPVVIERDDA---SSGTSTSSTDSEDSSSS---TSSGSGS 451
E P + PV IE+D S+G S S + SS S G G+
Sbjct: 400 NEHPTSSISPVTIEKDLVLGNSNGNSLGSVSGDPKMSSLPRASKGLGT 447
>gi|413917010|gb|AFW56942.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 487
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 155/481 (32%), Positives = 217/481 (45%), Gaps = 102/481 (21%)
Query: 53 NPPLFQSKPNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKD 112
NP ++ PNP + A S V + P+P + +V F T E +
Sbjct: 38 NPRRYRPGPNPIVSGSPPAPRAGSAVAAEPLPSPLR--------HVKFRPSELTPAEARH 89
Query: 113 LRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTX 172
LR+RL +L RVR SRI +Q + + P +A R
Sbjct: 90 LRERLTGELGRVRAFVSRI--DSWQDGRRRGPEPEPEPPARRSSPPPALVEAMR------ 141
Query: 173 SLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE 232
RRC +ILT+L + K+ FN+PVDV L+L DY II+ PMDLGTV+ L
Sbjct: 142 ---------RRCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLT 192
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK--QQQRQGI 290
Y + FA DVRLTFNNAL YNP H+V+ A L A FE M+++ +QQRQ +
Sbjct: 193 AGRYPSHEAFAGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYKEAVSWFEQQRQQL 252
Query: 291 ----------------------------LGRGK----------AREMSLEEKMALGRSLE 312
+ G+ REM EEK L +E
Sbjct: 253 EPPMQLDLLPPPPPPQLPVSVPVQAPLRMWGGRRPKPKARQPNKREMDEEEKQKLRVEIE 312
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
LP++++ +L IV+KRN + +LS G+ +ELD + LD +TL +L RFV N++KA K
Sbjct: 313 NLPEDKVLNVLQIVQKRNR-DPALS--GEVVELDFDELDIETLWELDRFVVNWRKALKKS 369
Query: 373 TEKEPMCS--------------------QVAVAVAAPVVIERS-------KKGDVAAE-- 403
M +V VAV VV+E +K +V AE
Sbjct: 370 QRNSRMNGDAAVMNADAIDATIVPDDDDRVEVAVNPSVVVEIGESETDVPEKNEVEAEMG 429
Query: 404 -EEVDIGEEIPVQNYPPVVIERDDASSGTSTSSTDSEDSSSSTSSGSGSSSSSDDDTAQS 462
E VDIG+E+ NY V I+RD ++ +S+ S SS+S+ S SD D A +
Sbjct: 430 DEYVDIGDEMLTMNYQSVEIQRDSLAASSSSGPG----SGSSSSTDSDLDPESDGDNASA 485
Query: 463 P 463
P
Sbjct: 486 P 486
>gi|110736040|dbj|BAE99992.1| hypothetical protein [Arabidopsis thaliana]
Length = 461
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 125/208 (60%), Gaps = 18/208 (8%)
Query: 84 PTPAQPQSLPESD---YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRI--ANSDFQA 138
PT A SL D + +L + ++ E+++L+++L ++LE VR+L R+ ++F
Sbjct: 31 PTVANSNSLGLEDNHQMMKISLSSISKLEVRNLKRKLQAELEEVRSLIKRLEPQGNNFAP 90
Query: 139 THAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGW 198
P K + G K+ G AAA T ++ C +LTKLMK K GW
Sbjct: 91 V---PNKKLKTANGGKKGGVHG------AAADK----GTVQILKSCNNLLTKLMKHKSGW 137
Query: 199 AFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP 258
FNTPVDVV+L L DYH+IIK+PMDL TV+++L ++YK P EFAEDVRLTFNNA++YNP
Sbjct: 138 IFNTPVDVVTLGLHDYHNIIKEPMDLETVKTRLSKSLYKSPLEFAEDVRLTFNNAMLYNP 197
Query: 259 KGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
GH VY MAE L FE+ + L Q +
Sbjct: 198 VGHDVYHMAEILLNLFEEKWVPLETQYE 225
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+++ +EK L L++LP ++L ++ I+KKR LS DEIELDI++LD +TL
Sbjct: 306 RDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRTP---ELSQQDDEIELDIDSLDLETLW 362
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQ 381
+L RFV +K++ K E++ + S+
Sbjct: 363 ELFRFVTEYKESLSKKKEEQGLDSE 387
>gi|224121914|ref|XP_002318704.1| global transcription factor group [Populus trichocarpa]
gi|222859377|gb|EEE96924.1| global transcription factor group [Populus trichocarpa]
Length = 613
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 192/390 (49%), Gaps = 62/390 (15%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANP 158
+L +R E KDL RL +DLE+VR L ++A+ + KS+ KRA P
Sbjct: 9 ILSLSKMSRPERKDLEIRLKNDLEQVRILHRKVASLSVHRSFEVSAPKSK-----KRAPP 63
Query: 159 FGN-PKAKRAAAG------TXSLTSTKNAM--RRCGEILTKLMKDKQGWAFNTPVDVVSL 209
N ++K+ +G + + NAM ++C +L +LM + GW FNTPVDVV +
Sbjct: 64 GRNGARSKKGTSGRFEPVKSAAPLGITNAMLMKQCETLLNRLMTHQFGWIFNTPVDVVKM 123
Query: 210 RLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAET 269
+ DY IIK PMDLGTV+S++ + Y P FA DVRLTF NA+ YNP G+ + MAET
Sbjct: 124 NIPDYFTIIKHPMDLGTVKSRIISGEYSSPLGFAADVRLTFANAMKYNPPGNDFHFMAET 183
Query: 270 LSAKFEQMFQKLSKQ----QQRQGILGRGKARE--------------------------- 298
LS FE ++ + K+ + + R R
Sbjct: 184 LSKFFEVRWKVIEKKIPVTADVEPVPSRADVRMEMETTAHIEKETTTDTPPLKKKKITPS 243
Query: 299 ------------MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELD 346
M+ EE+ L LE L E ++ +K+ +SGN + DEIE+D
Sbjct: 244 DNKVKPGPIRKVMTNEERQKLSMELEALLAELPENIIEFLKE-HSGNAGQTGE-DEIEID 301
Query: 347 IEALDNDTLSQLVRFVDNF-KKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEE 405
I+AL +D L L + +DN+ + +K++++ EP ++ + KG+ AEE+
Sbjct: 302 IDALGDDILFNLRKLLDNYLLEKQKNQSKVEPCEMEIINESGISNSSLQPCKGNDTAEED 361
Query: 406 VDI--GEEIPVQNYPPVVIERDDASSGTST 433
+DI G + P+ +YPPV IE++ A S
Sbjct: 362 IDIVGGNDPPISSYPPVKIEKEAAHKNKSV 391
>gi|413917011|gb|AFW56943.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 493
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 201/447 (44%), Gaps = 98/447 (21%)
Query: 53 NPPLFQSKPNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKD 112
NP ++ PNP + A S V + P+P + +V F T E +
Sbjct: 38 NPRRYRPGPNPIVSGSPPAPRAGSAVAAEPLPSPLR--------HVKFRPSELTPAEARH 89
Query: 113 LRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTX 172
LR+RL +L RVR SRI +Q + + P +A R
Sbjct: 90 LRERLTGELGRVRAFVSRI--DSWQDGRRRGPEPEPEPPARRSSPPPALVEAMR------ 141
Query: 173 SLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE 232
RRC +ILT+L + K+ FN+PVDV L+L DY II+ PMDLGTV+ L
Sbjct: 142 ---------RRCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLT 192
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK--QQQRQGI 290
Y + FA DVRLTFNNAL YNP H+V+ A L A FE M+++ +QQRQ +
Sbjct: 193 AGRYPSHEAFAGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYKEAVSWFEQQRQQL 252
Query: 291 ----------------------------LGRGK----------AREMSLEEKMALGRSLE 312
+ G+ REM EEK L +E
Sbjct: 253 EPPMQLDLLPPPPPPQLPVSVPVQAPLRMWGGRRPKPKARQPNKREMDEEEKQKLRVEIE 312
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
LP++++ +L IV+KRN + +LS G+ +ELD + LD +TL +L RFV N++KA K
Sbjct: 313 NLPEDKVLNVLQIVQKRNR-DPALS--GEVVELDFDELDIETLWELDRFVVNWRKALKKS 369
Query: 373 TEKEPMCS--------------------QVAVAVAAPVVIERS-------KKGDVAAE-- 403
M +V VAV VV+E +K +V AE
Sbjct: 370 QRNSRMNGDAAVMNADAIDATIVPDDDDRVEVAVNPSVVVEIGESETDVPEKNEVEAEMG 429
Query: 404 -EEVDIGEEIPVQNYPPVVIERDDASS 429
E VDIG+E+ NY V I+RD ++
Sbjct: 430 DEYVDIGDEMLTMNYQSVEIQRDSLAA 456
>gi|302823131|ref|XP_002993220.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
gi|300138990|gb|EFJ05740.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
Length = 702
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 170/335 (50%), Gaps = 68/335 (20%)
Query: 160 GNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIK 219
G+ KR + + M++CG +L KL+ K W FN PVD V L L DYH +I+
Sbjct: 93 GDIDNKRQRVELARMKRMGDIMKQCGTLLKKLITHKHAWVFNEPVDAVKLGLHDYHKVIR 152
Query: 220 KPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF- 278
+PMDLGT++ KLE Y+ P EFA+DV+LTF+NA+ YNP GH V+ MA+ L F++ +
Sbjct: 153 RPMDLGTIKKKLEGGHYRTPVEFADDVKLTFSNAMTYNPPGHDVFIMADILRQIFDERWR 212
Query: 279 ---QKLSKQQQ------------------------RQGILG---------------RGK- 295
+KL ++Q +Q +L RG
Sbjct: 213 CIKEKLEEEQTKCRVEDEVFAEIAQGNPNPALQNLKQSLLSIEDQLSSLKKPAGAPRGSK 272
Query: 296 ---AREMSLEEKMALGRSLEEL----PQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIE 348
R+M+ EEK LG++LE++ P ++ +++ ++KK N +LS D IE+DI+
Sbjct: 273 KSGKRQMTYEEKTELGKNLEKVLEQNPGDKADEIVLLLKKHNP---NLSQSEDTIEVDID 329
Query: 349 ALDNDTLSQLVRFVDN-FKKAEKDKTEKEPMCSQVAVAVAAP----------VVIERSKK 397
+DNDTL +L + V + K K + +P AP + + ++
Sbjct: 330 GIDNDTLWELHKMVASCMKPKNKKRPRPQPAEGIKQTGGTAPGDSPKKSRKSMFLSSRRR 389
Query: 398 GDVAAEEEVDI-GE-EIPVQNYPPVVIERDDASSG 430
G+ +E+VDI GE ++P NY PVV+++D + G
Sbjct: 390 GE-GLDEDVDIDGEDDMPTANYSPVVVDKDTPNDG 423
>gi|125591685|gb|EAZ32035.1| hypothetical protein OsJ_16213 [Oryza sativa Japonica Group]
Length = 337
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 173/338 (51%), Gaps = 70/338 (20%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
+RC +IL KL KDK+ FN PV+V L L DYH +IK PMDLGTVR+ L Y +
Sbjct: 3 KRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI----------- 290
FA DVRLTF+NAL YNP GH V+ A L A FE+M+ K S Q +
Sbjct: 63 FAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMY-KASMSWFEQELKLLEPPMPVPP 121
Query: 291 --------------------LGRGKARE-----MSLEEKMALGRSLEELPQEELGKLLGI 325
+ + KARE M+LEEK L LE LP+E++ +L I
Sbjct: 122 PELPPATAPVQVKPRAANVKMRKPKAREPNKRDMTLEEKNLLRVGLESLPEEKMHNVLQI 181
Query: 326 VKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCS----- 380
V+KRN GN L G EIELDI+ +D +T +L RFV+NFKKA +K+ + + +
Sbjct: 182 VRKRN-GNPELV--GGEIELDIDEMDVETQWELDRFVNNFKKA-LNKSRRAAIVNGENAD 237
Query: 381 --QVAVAVAAPVVIERS-----KKGDVAA-----------------EEEVDIGEEIPVQN 416
+VA + +++ S GDV +E VDIG+E+P
Sbjct: 238 VIDASVANDSDMLVNGSTATMVDNGDVTMAIESKDPDKITTQAEQLDEYVDIGDEMPTAT 297
Query: 417 YPPVVIERDDASSGTSTSSTDSEDSSSSTSSGSGSSSS 454
Y V IE+D ++ + +SS+ SS + S SG++ S
Sbjct: 298 YQSVEIEKDTEAASSGSSSSSDSGSSKDSVSESGNAHS 335
>gi|357144694|ref|XP_003573382.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 488
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 172/405 (42%), Gaps = 107/405 (26%)
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRA 156
YVT + +RRE +LR RL +L RVR L SRI + + Q
Sbjct: 76 YVTIRTSSLSRREALELRSRLAGELGRVRALLSRIDTWEDRRRPRREELPPQ-------- 127
Query: 157 NPFGNPKAKRAAAGTXSLTSTKNAMR-RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYH 215
+ AMR RC +ILTK+ K + FN PVDV L+L DYH
Sbjct: 128 --------------------LQAAMRKRCAQILTKIRKQRNSVWFNKPVDVERLKLHDYH 167
Query: 216 DIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF- 274
+I+ PMDLGTV+ L Y + FA+DVRLTFNNAL YNP GH V+ A +L A F
Sbjct: 168 AVIRNPMDLGTVKENLTAGRYHSHEAFADDVRLTFNNALRYNPVGHQVHRSAGSLLASFE 227
Query: 275 ----------EQMFQKLSKQQ-------------------------------QRQGILGR 293
EQ + Q Q +G
Sbjct: 228 GMYGEAVSWFEQECEHFEPMQLALPPPPMLALPPPPQPLVPVPVRVSPVPRLQEPPRMGP 287
Query: 294 GK----------AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEI 343
G+ REMS EEK L +E LP+E++ +L IV+KR+S + G+ +
Sbjct: 288 GRRPKPKAREPNKREMSDEEKHKLRVEIENLPEEKMENVLQIVQKRSSDPALM---GEVV 344
Query: 344 ELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPV------------- 390
ELD + +D DTL +L RFV N+KKA K + M V P+
Sbjct: 345 ELDFDEMDVDTLWELDRFVVNWKKALKKNRQTVVMNGDAVVTPVIPIEDDMMMVNVDTTV 404
Query: 391 ----------VIERSKKGDVAAEEEVDIGEEIPVQNYPPVVIERD 425
+ E+ +E VDIG+ +P NY V IE+D
Sbjct: 405 VVDIGESETDMPEKRTSEAEMVDEYVDIGDGMPTANYQSVEIEKD 449
>gi|297842055|ref|XP_002888909.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
gi|297334750|gb|EFH65168.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 124/213 (58%), Gaps = 22/213 (10%)
Query: 84 PTPAQPQSLPESD---YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATH 140
PT A+ SL D + +L + ++ E+++L+++L ++LE VR+L R+ +
Sbjct: 31 PTMAKSNSLGSEDNHQMMKISLSSISKLEVRNLKRKLQAELEEVRSLIKRL-----EPQA 85
Query: 141 AYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAF 200
P K + G K++ G AG T ++ C +LTKLMK K GW F
Sbjct: 86 PVPNKKLKTANGGKKSGVHG--------AGDKG---TVQILKSCNNLLTKLMKHKSGWVF 134
Query: 201 NTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKG 260
NTPVD V L L DYH I++KPMDLGTV+++L + YK P EFAEDVRLTFNNA++YNP G
Sbjct: 135 NTPVDAVRLGLHDYHTIVEKPMDLGTVKTRLSKSWYKSPLEFAEDVRLTFNNAMLYNPVG 194
Query: 261 HYVYAMAETLSAKFEQMFQKLSKQQQRQGILGR 293
H V+ MAE L FE+ + L Q G+L R
Sbjct: 195 HDVHHMAEFLLNLFEEKWAPLETQ---YGLLNR 224
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+++ +EK L L++LP ++L ++ I+KK N LS DEIELDI++LD +TL
Sbjct: 294 RDLTFDEKRRLSEDLQDLPYDKLEAVVQIIKK---SNPELSQQDDEIELDIDSLDLETLW 350
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQ 381
+L RFV +K+ K E+ + S+
Sbjct: 351 ELYRFVTEYKERSSKKKEEHGLDSE 375
>gi|226495673|ref|NP_001142282.1| uncharacterized protein LOC100274451 [Zea mays]
gi|194707994|gb|ACF88081.1| unknown [Zea mays]
Length = 350
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 147/303 (48%), Gaps = 62/303 (20%)
Query: 192 MKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFN 251
MK K W FNTPVD +L L DYH II KPMDLGTV+SKL Y+ P+EFA DVRLTF
Sbjct: 1 MKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKLAAGQYRSPREFAGDVRLTFR 60
Query: 252 NALVYNPKGHYVYAMAETLSAKFEQMF-------QKLSKQ-------------------- 284
NA+ YNPKG V+ MAE L FE+ + +LS Q
Sbjct: 61 NAMTYNPKGQDVHFMAEQLLNMFEEKWLEIEAELAQLSPQPPTPSSAAPRKPKEIDNSRA 120
Query: 285 --------------------QQRQGILGRGKARE-----MSLEEKMALGRSLEELPQEEL 319
R + + KARE M+ EK L +L++LP E+L
Sbjct: 121 LERSDSTVHAAGMEATPKTHNGRPPVSKKPKAREPNKRDMTFWEKQRLSNNLQDLPPEKL 180
Query: 320 GKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA---EKDKTEKE 376
++ I+KKRNS SL+ H DEIE+DI++ D +TL +L RFV N++K+ K K E
Sbjct: 181 DNVVQIIKKRNS---SLNQHDDEIEVDIDSFDVETLWELDRFVTNYRKSITKNKRKAELS 237
Query: 377 PMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIP----VQNYPPVVIERDDASSGTS 432
+ A P +ER ++ + + + E IP V PP I DD
Sbjct: 238 AVRPDEADPDQEPEKVERVRQDEADQDRIPAVQEPIPEPESVDVEPPKEIAADDNGRYVG 297
Query: 433 TSS 435
SS
Sbjct: 298 ESS 300
>gi|224060209|ref|XP_002300086.1| global transcription factor group [Populus trichocarpa]
gi|222847344|gb|EEE84891.1| global transcription factor group [Populus trichocarpa]
Length = 630
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 181/363 (49%), Gaps = 54/363 (14%)
Query: 109 ELKDLRKRLVSDLERVRNLGSRIANSDFQATHAY------PTTKSQNRGGSKRANPFGNP 162
E KDL +RL +LE+VRNL R+ D Q T+ N R F
Sbjct: 39 ERKDLEQRLRWELEQVRNLQKRV---DLQRTNGVTLSSSSDILSCSNGTNRPRIETFRKS 95
Query: 163 KAKRAAAGTXSLTSTKNA--MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+ G + T N M++C +L +LM + GW FN+PVD+V L + DY+ +IK
Sbjct: 96 SVMTSGPGKKTTPITPNIILMKQCETLLKRLMSHQYGWVFNSPVDIVKLNIPDYYTVIKN 155
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
PMDLGT++SK+ + Y P EF DVRLTF NA+VYNP+G Y MA+TL+ FE ++
Sbjct: 156 PMDLGTIKSKISSGAYSSPLEFMADVRLTFKNAMVYNPQGSDAYIMADTLNKFFEMRWKA 215
Query: 281 LSKQQQRQG---------------------------------ILGRGKAREMSLEEKMAL 307
+ K+ R G I+ R M+ EE++ L
Sbjct: 216 IEKKLPRAGGEVLQENSGPHEDFETAETSPAKKRKVTSFQHDIMPEPGKRGMTDEERLNL 275
Query: 308 GRSLEELPQEELGKLLGIVKKRNSGNGSLSCHG--DEIELDIEALDNDTLSQLVRFVDNF 365
GR LE L E ++ +++ S HG +EIE+DI+ L +DTL L + +D++
Sbjct: 276 GRELESLLGEMPVNIIDFLREHCSS----GRHGGEEEIEIDIDELSDDTLFTLRKLLDDY 331
Query: 366 -KKAEKDKTEKEPMCSQVAVAVAAPV-VIERSKKGDVAAEEEVDI-GEEIPVQNYPPVVI 422
++ K++T EP C + + P + KKG+ +EE+DI G PV +Y PV I
Sbjct: 332 LQEKRKNQTRGEP-CEIELLNESGPSNSSMQQKKGNDLGDEEIDIGGNGPPVSSYQPVEI 390
Query: 423 ERD 425
E++
Sbjct: 391 EKE 393
>gi|112292667|gb|ABI14812.1| chloroplast bromodomain-containing protein [Pachysandra terminalis]
Length = 428
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 109/168 (64%), Gaps = 12/168 (7%)
Query: 152 GSKRANPFGNPK-AKRAA---AGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVV 207
GSKR PF + + +KR A A T + S+ M++CG+ILTKLM+ K GW FN PVDVV
Sbjct: 6 GSKRPLPFTSGRDSKRPASEPAPTGKMLSS--MMKQCGQILTKLMRHKHGWIFNVPVDVV 63
Query: 208 SLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMA 267
+ L DY+ IIK PMDLGTV+ + N+Y P +FA DVRLTFNNAL YNPKGH VYAMA
Sbjct: 64 GMGLHDYNQIIKHPMDLGTVKLNIGKNLYSSPLDFASDVRLTFNNALSYNPKGHDVYAMA 123
Query: 268 ETLSAKFEQMFQ----KLSKQQQRQGILGRGKAREMSLEEKMALGRSL 311
E L +FE+MF+ K QQR+ + G+ R S ++ + S+
Sbjct: 124 EQLLVRFEEMFEPAYKKFEDAQQRK--ISAGEIRRSSWSHQIPMPESI 169
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 88/143 (61%), Gaps = 19/143 (13%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REMS EEK LG SL+ LPQE++ +++ I++KR NG L+ GDEIELDIE +D +TL
Sbjct: 238 REMSFEEKHKLGLSLQSLPQEKMEQVVQIIRKR---NGHLAQDGDEIELDIEVVDTETLW 294
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQ----VAVAVAAPV----------VIERSKKGDVAA 402
+L RFV N KK K +++ + S +PV ++ KKG++
Sbjct: 295 ELDRFVYNCKKL-MSKIKRQALVSNNQNTAEEGNKSPVSDSHEAAEAASAKKIKKGEI-G 352
Query: 403 EEEVDIGEEIPVQNYPPVVIERD 425
EE+VDIGEEIP N+PPV IE+D
Sbjct: 353 EEDVDIGEEIPTSNFPPVEIEKD 375
>gi|116309916|emb|CAH66950.1| B0809H07.5 [Oryza sativa Indica Group]
Length = 337
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 175/337 (51%), Gaps = 68/337 (20%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
+RC +IL KL KDK+ FN PV+V L L+DYH +IK PMDLGTVR+ L Y +
Sbjct: 3 KRCDQILVKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ-KLSKQQQRQGI---------- 290
FA D+RLTF+NAL YNP GH V+ A L A FE+M++ +S +Q I
Sbjct: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPP 122
Query: 291 -------------------LGRGKA-----REMSLEEKMALGRSLEELPQEELGKLLGIV 326
+ + KA REM+LEEK L LE LP+E++ +L IV
Sbjct: 123 ELPPAKAPAQVKPRAGNVKMRKPKAREPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIV 182
Query: 327 KKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCS------ 380
+KRN GN L G EIELDI+ +D +T +L RFV+ FKKA +K+ + + +
Sbjct: 183 RKRN-GNPELV--GGEIELDIDEMDVETQWKLDRFVNKFKKA-LNKSRRAAIVNGENADV 238
Query: 381 -QVAVAVAAPVVIERS-----KKGDVAA-----------------EEEVDIGEEIPVQNY 417
+VA + +++ S GDV +E VD+G+E+P Y
Sbjct: 239 IDASVANDSDMLVNGSTATMVDNGDVTMAIESKDPDKITTQAEQLDEYVDVGDEMPTATY 298
Query: 418 PPVVIERDDASSGTSTSSTDSEDSSSSTSSGSGSSSS 454
V IE+D ++ + +SS+ SS + S SG++ S
Sbjct: 299 QSVEIEKDTEAASSGSSSSSDSGSSKDSVSESGNAHS 335
>gi|356516581|ref|XP_003526972.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 786
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 189/402 (47%), Gaps = 81/402 (20%)
Query: 97 YVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIAN------------SDFQATHA--- 141
+ F+L A + E KDL+ RL +LE+VR +I SD + A
Sbjct: 96 FRHFSLSAMSGFERKDLKVRLTWELEQVREFQKKIDGMNSSVVGGLSLFSDIRGCSAGQK 155
Query: 142 YPTTKSQNRG-------GSKRANPFGN-PKAKRA-------AAGTXSLTSTKNAMRRCGE 186
P +SQ+ G KR P N PK+K++ A +TS M+ C
Sbjct: 156 RPKLESQHSTMEVSVPPGKKRPVPGHNGPKSKKSMSERLEHAKPAAPVTSYAMLMKSCEN 215
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L +LM + W FN PVDVV L + DY +IK PMDLGTV+ ++ + Y P +FA DV
Sbjct: 216 VLNRLMSHQFAWVFNDPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGEYSNPMDFAADV 275
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ---------------------- 284
RLTF+NA+ YNP G+ V+ MAETLS FE ++ + K+
Sbjct: 276 RLTFDNAMFYNPAGNDVHIMAETLSKFFETRWKAIEKKIPVIDCVASEPSRPTRVETEIS 335
Query: 285 -----QQRQGILGRGKA-------REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSG 332
+++ I + R +++EEK L LE + E ++ +++++
Sbjct: 336 DRVPPTKKKKITPNDSSVKPEPVKRIVTVEEKQKLSLELETMIGELPDSIVDFLREQSYN 395
Query: 333 NGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMC-------SQVAVA 385
G + DEIE+DI+ L +DTL +L + +D++ ++ K C S + +
Sbjct: 396 EG--QTNDDEIEIDIDTLSDDTLFKLRKLLDDYMLEKQKSQAKAGQCEMELLNESGFSNS 453
Query: 386 VAAPVVIERSKKGDVAAEEEVDI--GEEIPVQNYPPVVIERD 425
P KG+ EE+VDI G + P+ NYP + IE D
Sbjct: 454 SMQPC------KGNEQVEEDVDIVGGNDPPISNYPSLEIEND 489
>gi|413921105|gb|AFW61037.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 429
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 176/374 (47%), Gaps = 75/374 (20%)
Query: 61 PNPNQNKETRAHDPTSNVHFKKTPTPAQPQSLPE---------SDYVTFNLGAYTRRELK 111
P P+ N R H N + +P +P++ P S ++ F T E +
Sbjct: 31 PKPSSNPNPRRHRAGPNP--IPSGSPPEPRAAPAVAAEPSPSPSGHLNFRPSEMTPAEAR 88
Query: 112 DLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGT 171
LR RL S+L RVR SRI S G +R P + A G
Sbjct: 89 HLRARLTSELCRVRAFLSRI--------------DSWQDGQRRRRGP------EPPARGP 128
Query: 172 XSLTSTKNAMR-RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSK 230
+ AMR RC +IL +L + K+ FN+PVDV L+L DY II+ PMDLGTV+
Sbjct: 129 SPPPALVEAMRKRCADILMRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQN 188
Query: 231 LENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK--QQQRQ 288
L Y + FA DVRLTFNNAL YNP H+V+ A L A FE M+++ +QQRQ
Sbjct: 189 LTAGRYPSHEAFAGDVRLTFNNALRYNPPDHHVHRYAGNLLASFEGMYKEAVSWFEQQRQ 248
Query: 289 GI--------------------------LGRG-----------KAREMSLEEKMALGRSL 311
+ +G G REM EEK L +
Sbjct: 249 QLEPPMQPDLPPPPQLPVVSVPVQAPPRMGGGGRRPKPKAREPNKREMDEEEKQKLRVEI 308
Query: 312 EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKD 371
E LP+E++ +L IV+KRNS + G+ +ELD + LD +TL +L RFV N++KA K
Sbjct: 309 ENLPEEKMLNVLQIVQKRNS---DPAFTGEVVELDFDELDMETLWELDRFVVNWRKALK- 364
Query: 372 KTEKEPMCSQVAVA 385
K+++ M + A A
Sbjct: 365 KSQRNSMVNGDAAA 378
>gi|224136059|ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
gi|222869225|gb|EEF06356.1| global transcription factor group [Populus trichocarpa]
Length = 709
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 196/408 (48%), Gaps = 91/408 (22%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIA-----------NSDFQATH------- 140
+L +R E KDL RL +LE+VR L ++A +SD ++
Sbjct: 54 VLSLSKMSRPERKDLEMRLKKELEQVRILQRKVASLSSNTVLLSPSSDIRSCSDGQKRPP 113
Query: 141 ----------AYPTTK-----SQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCG 185
+ P +K +NRG +K+ + K AA ST M++C
Sbjct: 114 LEGLHSSFEVSAPQSKKRAPPDRNRGHTKKGTSARSEPVKPAAPLG---ISTAMLMKQCE 170
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAED 245
+L +LM + GW F TPVDVV L + DY IIK PMDLGTV+SK+ + Y P FA D
Sbjct: 171 ALLNRLMAHQFGWIFKTPVDVVKLNIPDYFTIIKHPMDLGTVKSKIVSGEYSSPLGFAAD 230
Query: 246 VRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ-----------------QRQ 288
VRLTF+NA+ YNP G+ V++MAETL FE ++ + K+ +R+
Sbjct: 231 VRLTFSNAMKYNPPGNDVHSMAETLRKYFEVRWKVIEKKLPVTTGVESMPSRIDVHIERE 290
Query: 289 GI-------------LGRGKA-------------REMSLEEKMALGRSLEELPQEELGKL 322
L + K R MS EK L LE L E +
Sbjct: 291 TTVHIERETTTSAPPLKKKKITPSDNKVKPEPVRRVMSNAEKQKLSMELEALLGELPESI 350
Query: 323 LGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF-KKAEKDKTEKEPMCSQ 381
+ +K+ +SGN + DEIE+DI+AL +DTL L + +DN+ + +K++++ EP +
Sbjct: 351 IEFLKE-HSGNAGQTGE-DEIEIDIDALGDDTLFNLRKLLDNYILEKQKNQSKAEPCEME 408
Query: 382 VAVAVAAPVVIERSKKGDVAAEEEVDI--GEEIPVQNYPPVVIERDDA 427
+ + + G+ EE++D+ G + P+ +YPP+ IE+D+A
Sbjct: 409 LNTHSSCFL-------GNDTVEEDIDVVGGNDPPISSYPPIKIEKDEA 449
>gi|449440580|ref|XP_004138062.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
gi|449501388|ref|XP_004161353.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
Length = 781
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 188/394 (47%), Gaps = 70/394 (17%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKS----QNRGG-- 152
F+L +R E KDL RL +LE+VR L R +N + + Q+RG
Sbjct: 95 VFSLSTLSRSERKDLELRLKLELEQVRLLQKRASNVSSNFAVSSSSNIQSSSDQHRGAPP 154
Query: 153 --------------SKRANPFG--NPKAKRAAAG-------TXSLTSTKNAMRRCGEILT 189
K+ P G P AKR+++G S+ ++++C ++L
Sbjct: 155 ETLNRLNEASVPPAKKQLVPSGRNGPSAKRSSSGRFESAKPAAVSASSTASLKQCEQLLQ 214
Query: 190 KLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLT 249
+LM GW FNTPVDVV L + DY +IK PMDLGTV+SKL Y P +FA DVRLT
Sbjct: 215 RLMSHTFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKSKLTAGEYTHPLDFAADVRLT 274
Query: 250 FNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK------QQQRQ--------------- 288
F+NA+ YNP + V+ MA+TLS FE ++ + K ++QRQ
Sbjct: 275 FSNAMTYNPPANDVHTMAKTLSKFFEVRWKTIEKKFPTTTEEQRQVPSATTVPKEAESAL 334
Query: 289 ---------------GILGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGN 333
+ + M+ +EK L LE L E ++ +K+ +S +
Sbjct: 335 PVPPPKKTKFPTNDPDVQPTSVVKVMTDQEKHKLSVELEALLGELPESIINFLKEHSSNS 394
Query: 334 GSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPVVIE 393
DEIE+DI+AL +DTL L + +D++ ++ T+ EP ++
Sbjct: 395 ---QAGEDEIEIDIDALSDDTLFALRKLLDDYMMEKQKCTKAEPCVVELHNESGFSNSSM 451
Query: 394 RSKKGDVAAEEEVDI--GEEIPVQNYPPVVIERD 425
KG+ +E+VDI G + PV +YPP+ IE+D
Sbjct: 452 PPSKGNDPIDEDVDILGGNDPPVSSYPPIEIEKD 485
>gi|297723469|ref|NP_001174098.1| Os04g0622700 [Oryza sativa Japonica Group]
gi|255675790|dbj|BAH92826.1| Os04g0622700 [Oryza sativa Japonica Group]
Length = 355
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 126/222 (56%), Gaps = 38/222 (17%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
+RC +IL KL KDK+ FN PV+V L L+DYH +IK PMDLGTVR+ L Y +
Sbjct: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ-KLSKQQQRQGI---------- 290
FA D+RLTF+NAL YNP GH V+ A L A FE+M++ +S +Q I
Sbjct: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPP 122
Query: 291 -------------------LGRGKA-----REMSLEEKMALGRSLEELPQEELGKLLGIV 326
+ + KA REM+LEEK L LE LP+E++ +L IV
Sbjct: 123 ELPPAKAPAQVKPRAGNVKMRKTKAREPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIV 182
Query: 327 KKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
+KRN GN L G EIELDI+ +D +T +L RFV+ FKKA
Sbjct: 183 RKRN-GNPELV--GGEIELDIDEMDVETQWELDRFVNKFKKA 221
>gi|125591682|gb|EAZ32032.1| hypothetical protein OsJ_16210 [Oryza sativa Japonica Group]
Length = 515
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 126/222 (56%), Gaps = 38/222 (17%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
+RC +IL KL KDK+ FN PV+V L L+DYH +IK PMDLGTVR+ L Y +
Sbjct: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ-KLSKQQQRQGI---------- 290
FA D+RLTF+NAL YNP GH V+ A L A FE+M++ +S +Q I
Sbjct: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPP 122
Query: 291 -------------------LGRGKA-----REMSLEEKMALGRSLEELPQEELGKLLGIV 326
+ + KA REM+LEEK L LE LP+E++ +L IV
Sbjct: 123 ELPPAKAPAQVKPRAGNVKMRKTKAREPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIV 182
Query: 327 KKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
+KRN GN L G EIELDI+ +D +T +L RFV+ FKKA
Sbjct: 183 RKRN-GNPELV--GGEIELDIDEMDVETQWELDRFVNKFKKA 221
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REM+LEEK L LE LP+E++ +L IV+KRN GN L G EIELDI+ +D +T
Sbjct: 313 REMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRN-GNPELV--GGEIELDIDEMDVETQW 369
Query: 357 QLVRFVDNFKKA 368
+L RFV+ FKKA
Sbjct: 370 ELDRFVNKFKKA 381
>gi|238481625|ref|NP_001154792.1| nuclear protein X1 [Arabidopsis thaliana]
gi|238481627|ref|NP_001154793.1| nuclear protein X1 [Arabidopsis thaliana]
gi|10177441|dbj|BAB10737.1| unnamed protein product [Arabidopsis thaliana]
gi|50253452|gb|AAT71928.1| At5g63330 [Arabidopsis thaliana]
gi|60543335|gb|AAX22265.1| At5g63330 [Arabidopsis thaliana]
gi|332010350|gb|AED97733.1| nuclear protein X1 [Arabidopsis thaliana]
gi|332010351|gb|AED97734.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 477
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 184/389 (47%), Gaps = 65/389 (16%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANP 158
+L +R E K+L +L +L++VR+L +IA+ P G +R P
Sbjct: 60 VLSLSKMSRSERKNLVHKLKMELQQVRDLSKKIASFSSDTVLLSPYNDHSCSDGPRRPPP 119
Query: 159 -----FGNPKAK----------RAAAGTXSLT-----STKNAMRRCGEILTKLMKDKQGW 198
F + K R G L + + M+ C +L +L K GW
Sbjct: 120 ENFATFVGSQGKKRPPVRSDKQRNKKGPSRLNVPTSYTVASVMKECETLLNRLWSHKSGW 179
Query: 199 AFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP 258
F TPVD V L + DY ++IK PMDLGT+RS+L Y P +FA DVRLTF+N++ YNP
Sbjct: 180 PFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNP 239
Query: 259 KGHYVYAMAETLSAKFEQMFQKLSKQ----------------------------QQRQGI 290
G+ + MA+ +S FE ++ + K+ ++++
Sbjct: 240 PGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSSASLESEIPFEVAPMRKKEAA 299
Query: 291 LGRGKAR------EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIE 344
+ K R M+ EK LG+ L L +E+ + + + + SG+ S G EIE
Sbjct: 300 MNDNKLRVEPAKLVMTDGEKKKLGQDLMAL-EEDFPQKIADLLREQSGSDGQSGEG-EIE 357
Query: 345 LDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVA----APVVIERSKKGDV 400
+DIEAL ++ L + + +D++ + +K EK C V + +P+ + KGD+
Sbjct: 358 IDIEALSDEILFMVRKLLDDYLREKKKSMEKSEPCEMEIVHDSGFSNSPL---QPSKGDL 414
Query: 401 AAEEEVDI--GEEIPVQNYPPVVIERDDA 427
+E+VDI G + V ++PP+ IE+D A
Sbjct: 415 QIDEDVDIVGGNDPSVSSHPPLKIEKDAA 443
>gi|449526541|ref|XP_004170272.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE4-like
[Cucumis sativus]
Length = 629
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 121/247 (48%), Gaps = 65/247 (26%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C +L KLMK K GW FNTPVDV L L DY II+ PMDLGTV+++L N YK P+EFA
Sbjct: 305 CVSLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPMDLGTVKTRLNKNWYKSPKEFA 364
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG----------- 292
EDVRLTF NA+ YNPKG V+ MAE L FE + + ++ LG
Sbjct: 365 EDVRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWVVIESNYYQEMRLGMEYGGPLPSSN 424
Query: 293 --RGKAREMSLEEKMALGRS---------------------------------------- 310
RG R + L+ + L RS
Sbjct: 425 SVRGHPRPVPLDMRKILRRSDSLINPADSRTQPMSVTPSARTPSLKKPKAKDVFKRDMTY 484
Query: 311 ---------LEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRF 361
L+ LP E+L +L I+KKRN L DEIE+DI+++D +TL +L R
Sbjct: 485 NEKKKLSTNLQNLPSEKLDAILQIIKKRNF---ELLQQDDEIEVDIDSVDTETLWELDRL 541
Query: 362 VDNFKKA 368
V N++K+
Sbjct: 542 VMNYRKS 548
>gi|125581496|gb|EAZ22427.1| hypothetical protein OsJ_06088 [Oryza sativa Japonica Group]
Length = 656
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 151/295 (51%), Gaps = 67/295 (22%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
+A ++ +L++LMK K GW FN PVD V+L L DY IIK PMDLGT++++L + Y+
Sbjct: 314 HAFKKSMSLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRN 373
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ------------ 286
P+EFA+DVRLTF+NA+ YNPKG V+ MAE L FE + ++ + Q
Sbjct: 374 PREFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVQYLASCPPLPNKF 433
Query: 287 ----------------RQGILGRGKAREMS--------------------------LEEK 304
+ ++ K+R +S ++EK
Sbjct: 434 PPPPIDVRFLDRSDSVKHHMVLDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEK 493
Query: 305 MALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDN 364
L +L+ LP E+L ++ I+K +N S+ H DEIE++I+++D +TL +L RFV N
Sbjct: 494 RKLSNNLQNLPPEKLDVVVQIIKNKNL---SVRQHDDEIEVEIDSMDTETLWELDRFVAN 550
Query: 365 FKK---AEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPVQN 416
+KK +K K E+ + Q A A V ++ +E +IG + P QN
Sbjct: 551 YKKNLSKQKRKAERAMLARQDAELHAQHVAPQQP-------SQEPNIGVKSPKQN 598
>gi|357141014|ref|XP_003572045.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 629
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 138/262 (52%), Gaps = 60/262 (22%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
+A ++ +L++LMK K GW FN PVD V+L L DY IIK PMDLGT++++L Y+
Sbjct: 282 HAFKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKAQLTRGQYRN 341
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ------------ 286
P+EFA+DVRLTF+NA+ YNPKG V+ MAE L FE + ++ + +
Sbjct: 342 PKEFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIQAEVEYLASCPPLPKKF 401
Query: 287 -------------------------------------RQGILGRGKARE-----MSLEEK 304
R L + KA++ M+++EK
Sbjct: 402 PPPPIDLRLLERSDSLKHHMALDSKSRPLSHTPTYSVRTPSLKKPKAKDLDKRDMTIDEK 461
Query: 305 MALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDN 364
L +L+ LP E+L ++ I+K +N S+ H DEIE++I+++D +TL +L RFV N
Sbjct: 462 RKLSNNLQNLPPEKLDIVVQIIKNKNL---SVRQHDDEIEVEIDSMDAETLWELDRFVAN 518
Query: 365 FKK---AEKDKTEKEPMCSQVA 383
FKK +K K E+ + Q A
Sbjct: 519 FKKNLSKQKRKAERAMLARQDA 540
>gi|449465695|ref|XP_004150563.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 629
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 121/247 (48%), Gaps = 65/247 (26%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C +L KLMK K GW FNTPVDV L L DY II+ PMDLGTV+++L N YK P+EFA
Sbjct: 305 CVSLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPMDLGTVKTRLNKNWYKSPKEFA 364
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG----------- 292
EDVRLTF NA+ YNPKG V+ MAE L FE + + ++ LG
Sbjct: 365 EDVRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWVVIESNYYQEMRLGMEYGAPLPSSN 424
Query: 293 --RGKAREMSLEEKMALGRS---------------------------------------- 310
RG R + L+ + L RS
Sbjct: 425 SVRGHPRPVPLDMRKILRRSDSLINPADSRTQPMSVTPSARTPSLKKPKAKDVFKRDMTY 484
Query: 311 ---------LEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRF 361
L+ LP E+L +L I+KKRN L DEIE+DI+++D +TL +L R
Sbjct: 485 NEKKKLSTNLQNLPSEKLDAILQIIKKRNF---ELLQQDDEIEVDIDSVDTETLWELDRL 541
Query: 362 VDNFKKA 368
V N++K+
Sbjct: 542 VMNYRKS 548
>gi|38344163|emb|CAE03494.2| OSJNBa0053K19.2 [Oryza sativa Japonica Group]
gi|38345711|emb|CAD41833.2| OSJNBb0085C12.13 [Oryza sativa Japonica Group]
Length = 299
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 126/222 (56%), Gaps = 38/222 (17%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
+RC +IL KL KDK+ FN PV+V L L+DYH +IK PMDLGTVR+ L Y +
Sbjct: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ-KLSKQQQRQGI---------- 290
FA D+RLTF+NAL YNP GH V+ A L A FE+M++ +S +Q I
Sbjct: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPP 122
Query: 291 -------------------LGRGKA-----REMSLEEKMALGRSLEELPQEELGKLLGIV 326
+ + KA REM+LEEK L LE LP+E++ +L IV
Sbjct: 123 ELPPAKAPAQVKPRAGNVKMRKTKAREPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIV 182
Query: 327 KKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
+KRN GN L G EIELDI+ +D +T +L RFV+ FKKA
Sbjct: 183 RKRN-GNPELV--GGEIELDIDEMDVETQWELDRFVNKFKKA 221
>gi|356574042|ref|XP_003555161.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 741
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 193/387 (49%), Gaps = 77/387 (19%)
Query: 111 KDLRKRLVSDLERVRNLGSRI---------------------------ANSDFQATHAYP 143
KDL +RL S+LE++R L +I D + +
Sbjct: 76 KDLGQRLRSELEQIRLLQKKIEQQRTTAVVLSSSSDILSCSNGNNGHRVERDKKPAMSSS 135
Query: 144 TTKSQNRGGSKRANPFG---NPKAKRAAAGTXSLTSTKNAM--RRCGEILTKLMKDKQGW 198
+++ + G+K P G K +A + ST NAM + C +L +LM + W
Sbjct: 136 APRNKAKPGNKNQKPRGWNRGSSGKFESAVQSASPSTANAMLMKDCELLLKRLMNHQYAW 195
Query: 199 AFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP 258
FNTPVDVV L L DY IIK+PMDLGTV++KL + Y P EFA+DV+LTF+NA+ YNP
Sbjct: 196 VFNTPVDVVKLNLPDYFTIIKRPMDLGTVKNKLASGEYAGPLEFADDVKLTFSNAMDYNP 255
Query: 259 KGHYVYAMAETLSAKFEQMFQKLSKQQQ--------------------RQGILGRGK--- 295
G+ V+ MA+TL+ FE ++ + K+ Q RQ L + +
Sbjct: 256 SGNDVHLMADTLNKYFELRWKAIEKKLQKSDFLPLPANPDNSEGVKTKRQAPLSKKRKIA 315
Query: 296 ------------AREMSLEEKMALGRSLEELPQEELGKL-LGIVK--KRNSGNGSLSCHG 340
+ MS +EK LGR LE +LG++ + I+ K +S NG C
Sbjct: 316 SLPPQPEVMPPTKKVMSDQEKHDLGRELE----SQLGEMPMHIIDFLKEHSSNGR-ECGD 370
Query: 341 DEIELDIEALDNDTLSQLVRFVDNF-KKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGD 399
DEIE+DI+ L +DTL L + +D+F +K +K+K + E +V + KG+
Sbjct: 371 DEIEIDIDDLSDDTLFTLRKLLDDFLQKKQKNKAKVEACEVEVLNDSGPSNSSLQPFKGN 430
Query: 400 VAAEEEVDI-GEEIPVQNYPPVVIERD 425
A+EEVDI G E PV +YP V IE+D
Sbjct: 431 DPADEEVDIGGNEPPVSSYPHVEIEKD 457
>gi|297598920|ref|NP_001046443.2| Os02g0250300 [Oryza sativa Japonica Group]
gi|255670765|dbj|BAF08357.2| Os02g0250300 [Oryza sativa Japonica Group]
Length = 600
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 151/309 (48%), Gaps = 61/309 (19%)
Query: 133 NSDFQ-ATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKL 191
NS+F A +P + S R K A A +A ++ +L++L
Sbjct: 267 NSEFLLAKDKFPPSDSHGRKKPKHHKKKHRSLASHGAGYDAEQRLYSHAFKKSMSLLSRL 326
Query: 192 MKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFN 251
MK K GW FN PVD V+L L DY IIK PMDLGT++++L + Y+ P+EFA+DVRLTF+
Sbjct: 327 MKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPREFADDVRLTFH 386
Query: 252 NALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ------------------------- 286
NA+ YNPKG V+ MAE L FE + ++ + Q
Sbjct: 387 NAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVQYLASCPPLPNKFPPPPIDVRFLDRS 446
Query: 287 ---RQGILGRGKAREMS--------------------------LEEKMALGRSLEELPQE 317
+ ++ K+R +S ++EK L +L+ LP E
Sbjct: 447 DSVKHHMVLDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKLSNNLQNLPPE 506
Query: 318 ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKK---AEKDKTE 374
+L ++ I+K +N S+ H DEIE++I+++D +TL +L RFV N+KK +K K E
Sbjct: 507 KLDVVVQIIKNKNL---SVRQHDDEIEVEIDSMDTETLWELDRFVANYKKNLSKQKRKAE 563
Query: 375 KEPMCSQVA 383
+ + Q A
Sbjct: 564 RAMLARQDA 572
>gi|18394534|ref|NP_564037.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|75151921|sp|Q8H1D7.1|GTE5_ARATH RecName: Full=Transcription factor GTE5, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE5; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E5;
Flags: Precursor
gi|23297757|gb|AAN13019.1| unknown protein [Arabidopsis thaliana]
gi|332191516|gb|AEE29637.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 487
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 112/187 (59%), Gaps = 6/187 (3%)
Query: 98 VTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRAN 157
+ +L + ++ E+++L+++L S+L+ VR+L R D +A KS G SK+
Sbjct: 56 LKISLSSISKLEVRNLKRKLKSELDEVRSLIKRF---DPEANPGGSMAKSGVVGRSKKVK 112
Query: 158 PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDI 217
GN K++ G T + C +LTKLMK K W FN PVD L L DYH+I
Sbjct: 113 T-GNGGGKKSGHGADK--GTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNI 169
Query: 218 IKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
+K+PMDLGTV++KL ++YK P +FAEDVRLTFNNA++YNP GH VY AE L FE
Sbjct: 170 VKEPMDLGTVKTKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDK 229
Query: 278 FQKLSKQ 284
+ + Q
Sbjct: 230 WVSIEMQ 236
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+++LEEK L L++LP ++L ++ I+KK N LS DEIELDI++LD +TL
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNP---ELSQKDDEIELDIDSLDINTLW 384
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQ 381
+L RFV +K++ K E S+
Sbjct: 385 ELYRFVTGYKESLSKKNEAHGFGSE 409
>gi|9665057|gb|AAF97259.1|AC034106_2 Contains similarity to female sterile homeotic-related protein
Frg-1 from Mus musculus gb|AF045462 and contains a
bromodomain PF|00439 [Arabidopsis thaliana]
Length = 440
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 112/187 (59%), Gaps = 6/187 (3%)
Query: 98 VTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRAN 157
+ +L + ++ E+++L+++L S+L+ VR+L R D +A KS G SK+
Sbjct: 56 LKISLSSISKLEVRNLKRKLKSELDEVRSLIKRF---DPEANPGGSMAKSGVVGRSKKVK 112
Query: 158 PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDI 217
GN K++ G T + C +LTKLMK K W FN PVD L L DYH+I
Sbjct: 113 T-GNGGGKKSGHGADK--GTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNI 169
Query: 218 IKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
+K+PMDLGTV++KL ++YK P +FAEDVRLTFNNA++YNP GH VY AE L FE
Sbjct: 170 VKEPMDLGTVKTKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDK 229
Query: 278 FQKLSKQ 284
+ + Q
Sbjct: 230 WVSIEMQ 236
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+++LEEK L L++LP ++L ++ I+KK N LS DEIELDI++LD +TL
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNP---ELSQKDDEIELDIDSLDINTLW 384
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQ 381
+L RFV +K++ K E S+
Sbjct: 385 ELYRFVTGYKESLSKKNEAHGFGSE 409
>gi|218190413|gb|EEC72840.1| hypothetical protein OsI_06575 [Oryza sativa Indica Group]
Length = 420
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 163/342 (47%), Gaps = 68/342 (19%)
Query: 133 NSDFQ-ATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKL 191
NS+F A +P + S R K A A +A ++ +L++L
Sbjct: 31 NSEFLLAKDKFPPSDSHGRKKPKHHKKKHRSLASHGAGYDAEQRLYSHAFKKSMSLLSRL 90
Query: 192 MKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFN 251
MK K GW FN PVD V+L L DY IIK PMDLGT++++L + Y+ P+EFA+DVRLTF+
Sbjct: 91 MKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPREFADDVRLTFH 150
Query: 252 NALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ------------------------- 286
NA+ YNPKG V+ MAE L FE + ++ + Q
Sbjct: 151 NAMTYNPKGQDVHFMAEQLLGIFEVQWPEIEAEVQYLASCPPLPNKFPPPPIDVRFLDRS 210
Query: 287 ---RQGILGRGKAREMS--------------------------LEEKMALGRSLEELPQE 317
+ + K+R +S ++EK L +L+ LP E
Sbjct: 211 DSVKHHMALDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKLSNNLQNLPPE 270
Query: 318 ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKK---AEKDKTE 374
+L ++ I+K +N S+ H DEIE++I+++D +TL +L RFV N+KK +K K E
Sbjct: 271 KLDVVVQIIKNKNL---SVRQHDDEIEVEIDSMDTETLWELDRFVANYKKNLSKQKRKAE 327
Query: 375 KEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPVQN 416
+ + Q A A V ++ +E +IG + P QN
Sbjct: 328 RAMLARQDAELHAQHVAPQQ-------PSQEPNIGVKSPKQN 362
>gi|15810439|gb|AAL07107.1| unknown protein [Arabidopsis thaliana]
Length = 487
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 111/187 (59%), Gaps = 6/187 (3%)
Query: 98 VTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRAN 157
+ +L + ++ E+++L+++L S+L+ VR+L R D +A KS G SK+
Sbjct: 56 LKISLSSISKLEVRNLKRKLKSELDEVRSLIKRF---DPEANPGGSMAKSGVVGRSKKVK 112
Query: 158 PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDI 217
GN K++ G T + C +LTKLMK K W FN PVD L L DYH+I
Sbjct: 113 T-GNGGGKKSGHGADK--GTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNI 169
Query: 218 IKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
+K+PMDLGTV+ KL ++YK P +FAEDVRLTFNNA++YNP GH VY AE L FE
Sbjct: 170 VKEPMDLGTVKIKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDK 229
Query: 278 FQKLSKQ 284
+ + Q
Sbjct: 230 WVSIEMQ 236
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+++LEEK L L++LP ++L ++ I+KK N LS DEIELDI++LD +TL
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNP---ELSQKDDEIELDIDSLDINTLW 384
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQ 381
+L RFV +K++ K E S+
Sbjct: 385 ELYRFVTGYKESLSKKNEAHGFGSE 409
>gi|255540327|ref|XP_002511228.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223550343|gb|EEF51830.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 759
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 189/400 (47%), Gaps = 76/400 (19%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIAN-----------SDFQA--------- 138
+L +R E K+L+ R +LE+VR L ++A+ SD ++
Sbjct: 96 VLSLSKMSRFERKNLKLRFKRELEQVRFLYKKVASLGSNAAALSPSSDIRSCSDGLKRPP 155
Query: 139 ------THAYPTTKSQNRG----GSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEIL 188
++A +S+ RG R + +++ +TS M++C +L
Sbjct: 156 LETLHKSYAVSAPQSKKRGPPGRNGARTKKSSHKRSEPEKLAAPVITSNAMLMKQCETLL 215
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
++LM + W FN PVDV L + DY +IK PMDLGTV+SK+ Y P FA DVRL
Sbjct: 216 SRLMLHQYAWVFNNPVDVEKLNIPDYFTVIKHPMDLGTVKSKITTGAYSSPLAFAADVRL 275
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ----------QQRQGILGRGKAR- 297
TF+NA+ YNP G+ V+ MAETLS FE ++ + K+ R GI + +
Sbjct: 276 TFSNAMKYNPPGNDVHFMAETLSKYFEVRWKAIEKKLPVTIGAEPVAPRAGIHVETETKI 335
Query: 298 ------------------------EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSG- 332
MS EEK+ L LE L E ++ +K+ +
Sbjct: 336 DPTPAKKKKIAQIDSMVKLEPFRQVMSNEEKLKLSTELEALLSELPETIIDFLKEHSHND 395
Query: 333 --NGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF-KKAEKDKTEKEPMCSQVAVAVAAP 389
NG + EIE+DI+ L +DTL +L + +D++ + K++ + EP ++
Sbjct: 396 DQNGEV-----EIEIDIDTLSDDTLFELRKLLDDYLLEKRKNQAKAEPSEMELLNESGFS 450
Query: 390 VVIERSKKGDVAAEEEVDI-GE-EIPVQNYPPVVIERDDA 427
+ KG+ +E++DI GE + PV +YPPV IE+D A
Sbjct: 451 NSSWQPCKGNEPVDEDIDILGENDPPVSSYPPVEIEKDAA 490
>gi|326496376|dbj|BAJ94650.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 662
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 152/304 (50%), Gaps = 72/304 (23%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
+A ++ +L +LMK K GW FN PVD V+L L DY IIK PMDLGT++ +L Y+
Sbjct: 322 HAFKKSSSLLCRLMKHKFGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKGQLTRGHYRD 381
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-------------- 284
P+EFA DVRLTF+NA+ YNPKG V+ MAE L FE + ++ +
Sbjct: 382 PKEFANDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVDYLASCPPLPKKF 441
Query: 285 ----------------------------------QQRQGILGRGKARE-----MSLEEKM 305
R L + KA++ M+++EK
Sbjct: 442 PPPPIDLRLLERSDSLKPHMALDSKSRPISHTPISVRTPSLKKPKAKDLDKRDMTIDEKR 501
Query: 306 ALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF 365
L +L+ LP E+L ++ I+K +N S+ H DEIE++I+++D +TL +L RFV NF
Sbjct: 502 KLSNNLQNLPPEKLDIVVQIIKNKNL---SVRQHEDEIEVEIDSMDAETLWELDRFVANF 558
Query: 366 KK---AEKDKTEKEPMCSQVAVAVAA----------PVVIERSKKGDVAAEEEVDIGEEI 412
KK +K K E+ M ++ V + A P V E+S K ++ E+ + +
Sbjct: 559 KKNLSKQKRKAERA-MLARQDVELRALHAAQQTSQQPNVGEKSPKLNLMVSEQ--LATSV 615
Query: 413 PVQN 416
P QN
Sbjct: 616 PDQN 619
>gi|356513665|ref|XP_003525531.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 739
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 192/398 (48%), Gaps = 77/398 (19%)
Query: 94 ESDYVTFNLGAYT---RRELKDLRKRLVSDLERVRNLGSRIAN-----------SDFQAT 139
ES V F L + T R KDL RL S+LE VR L +IA SD ++
Sbjct: 58 ESFDVPFQLLSLTKMARSGRKDLTLRLKSELEEVRKLQKKIAGMSSITTELSPYSDIRSC 117
Query: 140 HA---YPTTKSQNRGGSKRANPFGN-PKAKRAAAGTXSLTSTKNA----------MRRCG 185
P +S G KR N PK KR+ +G S K+A M++C
Sbjct: 118 SVGEKRPPLESLALHGKKRPLLKHNGPKTKRSISG--RFISAKSAAPVTPSYAVLMKQCE 175
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAED 245
+L ++M + G F+ PVD+V + DY IIK PMDLGTV+SKL + Y +FA D
Sbjct: 176 TLLKRVMSHQFGKVFDKPVDIVKWNIPDYFTIIKHPMDLGTVKSKLISCEYTSLMDFAAD 235
Query: 246 VRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK---------------------- 283
VRLTF+NA+ YNP G+ V+ MAETLS FE ++ + K
Sbjct: 236 VRLTFSNAMSYNPPGNDVHVMAETLSKYFETRWKPIEKILAIDDVPSEPSKPTTCIEKSE 295
Query: 284 ----QQQRQGILGRGK-------AREMSLEEK----MALGRSLEELPQEELGKLLGIVKK 328
+++ I G R M+ EEK M L S+ ELP+ + L K
Sbjct: 296 IVDPPVKKKKITPNGTNVKPEPIKRIMTGEEKQKLSMELDASVVELPENIIDFL-----K 350
Query: 329 RNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAA 388
S N S + DEIE+DI+AL +DTL +L + +D+F EK KT +P ++ A +
Sbjct: 351 EQSYNAS-QINDDEIEIDIDALSDDTLFKLRKLLDDF-MLEKQKTLAKPGPCEIQPANES 408
Query: 389 PVVIERSK-KGDVAAEEEVDI--GEEIPVQNYPPVVIE 423
+ +G+ EEEVDI G++ P+ +YPP IE
Sbjct: 409 GFSNSLQQCEGNEPIEEEVDIVGGDDPPLPSYPPAEIE 446
>gi|302142921|emb|CBI20216.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 103/173 (59%), Gaps = 6/173 (3%)
Query: 106 TRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAK 165
++ E +DLR++L+ +L++VR+L ++ +D Q + Y ++ G R A
Sbjct: 57 SKVEKRDLRRKLLGELDQVRSLAKKLDTNDGQLS-GYAHSQVSGNDGLDRGGG-----AL 110
Query: 166 RAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLG 225
R + S+ A + C +L KLMK K GW FN PVDV L L DY+ IIK PMD G
Sbjct: 111 RVNSEVGSVGYVAQAFKNCSNLLAKLMKHKHGWVFNNPVDVKGLGLHDYYSIIKHPMDFG 170
Query: 226 TVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
TV+S+L N YK P+EFAEDVRLT NA+ YNPKG V+ MAE L FE+ +
Sbjct: 171 TVKSRLSKNWYKSPREFAEDVRLTLQNAMTYNPKGQDVHCMAEELLKIFEEKW 223
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+ EEK L +L+ LP E+L ++ I+KKRNS ++S DEIE+DI+++D +TL
Sbjct: 302 RDMTYEEKQKLSSNLQSLPSEKLDHIVQIIKKRNS---AVSQQDDEIEVDIDSVDAETLW 358
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQV 382
+L R+V N+KK+ K + Q
Sbjct: 359 ELDRYVTNYKKSLSKNKRKAELAFQA 384
>gi|242061170|ref|XP_002451874.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
gi|241931705|gb|EES04850.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
Length = 654
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 132/261 (50%), Gaps = 59/261 (22%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
+A ++ +L++LMK K GW FN PVD V+L L DY IIK PMDLGT+R +L + Y+
Sbjct: 359 HAFKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSHGQYRN 418
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-------------Q 285
P+EFAEDVRLTF+NA+ YNPKG V+ MAE LS FE + ++ +
Sbjct: 419 PKEFAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKF 478
Query: 286 QRQGILGRGKAREMSLEEKMAL-------------------------------------- 307
I R R S+ MAL
Sbjct: 479 PPPPIDLRFLERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKR 538
Query: 308 --GRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF 365
+L+ LP E+L ++ ++K +N S+ H DEIE++I+++D +TL +L RFV N+
Sbjct: 539 KLSENLQNLPPEKLDAVVQVIKNKNL---SVMQHDDEIEVEIDSMDAETLWELDRFVANY 595
Query: 366 KK---AEKDKTEKEPMCSQVA 383
KK +K K E+ + Q A
Sbjct: 596 KKNLSKQKRKAERAMLARQDA 616
>gi|240256475|ref|NP_201137.5| nuclear protein X1 [Arabidopsis thaliana]
gi|327488242|sp|Q9FGW9.2|GTE10_ARATH RecName: Full=Transcription factor GTE10; AltName:
Full=Bromodomain-containing protein GTE10; AltName:
Full=Nuclear protein X1; AltName: Full=Protein GLOBAL
TRANSCRIPTION FACTOR GROUP E10
gi|332010349|gb|AED97732.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 1061
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 184/389 (47%), Gaps = 65/389 (16%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANP 158
+L +R E K+L +L +L++VR+L +IA+ P G +R P
Sbjct: 60 VLSLSKMSRSERKNLVHKLKMELQQVRDLSKKIASFSSDTVLLSPYNDHSCSDGPRRPPP 119
Query: 159 -----FGNPKAK----------RAAAGTXSLT-----STKNAMRRCGEILTKLMKDKQGW 198
F + K R G L + + M+ C +L +L K GW
Sbjct: 120 ENFATFVGSQGKKRPPVRSDKQRNKKGPSRLNVPTSYTVASVMKECETLLNRLWSHKSGW 179
Query: 199 AFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP 258
F TPVD V L + DY ++IK PMDLGT+RS+L Y P +FA DVRLTF+N++ YNP
Sbjct: 180 PFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNP 239
Query: 259 KGHYVYAMAETLSAKFEQMFQKLSKQ----------------------------QQRQGI 290
G+ + MA+ +S FE ++ + K+ ++++
Sbjct: 240 PGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSSASLESEIPFEVAPMRKKEAA 299
Query: 291 LGRGKAR------EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIE 344
+ K R M+ EK LG+ L L +E+ + + + + SG+ S G EIE
Sbjct: 300 MNDNKLRVEPAKLVMTDGEKKKLGQDLMAL-EEDFPQKIADLLREQSGSDGQSGEG-EIE 357
Query: 345 LDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVA----APVVIERSKKGDV 400
+DIEAL ++ L + + +D++ + +K EK C V + +P+ + KGD+
Sbjct: 358 IDIEALSDEILFMVRKLLDDYLREKKKSMEKSEPCEMEIVHDSGFSNSPL---QPSKGDL 414
Query: 401 AAEEEVDI--GEEIPVQNYPPVVIERDDA 427
+E+VDI G + V ++PP+ IE+D A
Sbjct: 415 QIDEDVDIVGGNDPSVSSHPPLKIEKDAA 443
>gi|219888341|gb|ACL54545.1| unknown [Zea mays]
gi|413937646|gb|AFW72197.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 538
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 182/391 (46%), Gaps = 62/391 (15%)
Query: 91 SLPESDYVTFN-LGAYTRREL-----------KDLRKRLVSDLERVRNLGSRI------- 131
S+P+ ++ N +G +RE+ + LRKR ++L+ VR+L +
Sbjct: 55 SVPKRKCISLNSVGFDVKREILVPSKMSSSERRYLRKRFRAELDSVRDLLKKPEFAAPVP 114
Query: 132 -----ANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGE 186
A S A A KSQ G + G + T ++ S A ++C
Sbjct: 115 LNRAPALSSSAAPRAKKPQKSQRGGTNVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEA 174
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
IL KLM K FN PVD+V L++ DY DI+K PMDLGTV+ KLE+ Y P +FA DV
Sbjct: 175 ILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADV 234
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-----QQRQGILGRGKAR---- 297
RLTFNNA+ YNP+GH V+ MA L+ FE ++ + K+ ++ + R ++
Sbjct: 235 RLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAATEKHVEVDRADSKRRKT 294
Query: 298 ---------------------EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL 336
+M+ EE+ A G L + E + ++++ N L
Sbjct: 295 PPVDRSDVSMECARQTEPETPKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL 354
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFVDNF--KKAEKDKTEKEPMCSQVAVAVAAPVVIER 394
S G EIE+DI A+ +D L +L + VD + +K + + + EP ++
Sbjct: 355 SGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTN 413
Query: 395 SKKGDVAAEEEVDIGEEIPVQNYPPVVIERD 425
KG EE+VDI N P+++++D
Sbjct: 414 PCKGGEPIEEDVDI-----CGNASPIMLDKD 439
>gi|224146489|ref|XP_002326024.1| global transcription factor group [Populus trichocarpa]
gi|222862899|gb|EEF00406.1| global transcription factor group [Populus trichocarpa]
Length = 393
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 110/181 (60%), Gaps = 14/181 (7%)
Query: 98 VTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRAN 157
V +L + +++E ++LRK+L S+LE VR+L +I + Q + +P +S + + N
Sbjct: 1 VKVDLLSQSKQEKRELRKKLESELELVRSLVKKIEAKELQL-NKFPPAESNKKS---KLN 56
Query: 158 PFGNPKAKRAAAGTXSL---TSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDY 214
K+ AG T TK + C +L KLMK K GW FNTPVDV L L DY
Sbjct: 57 ------GKKQGAGESGFGFGTGTK-IFKNCSALLDKLMKHKHGWVFNTPVDVKGLGLHDY 109
Query: 215 HDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
IIK PMDLGTV+S+L N YK P+EFAEDVRLTF+NA+ YNPKG V+ MAE L F
Sbjct: 110 FIIIKHPMDLGTVKSRLTKNWYKSPEEFAEDVRLTFHNAMKYNPKGQDVHVMAEQLLDIF 169
Query: 275 E 275
E
Sbjct: 170 E 170
>gi|413937645|gb|AFW72196.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 488
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 182/391 (46%), Gaps = 62/391 (15%)
Query: 91 SLPESDYVTFN-LGAYTRREL-----------KDLRKRLVSDLERVRNLGSRI------- 131
S+P+ ++ N +G +RE+ + LRKR ++L+ VR+L +
Sbjct: 55 SVPKRKCISLNSVGFDVKREILVPSKMSSSERRYLRKRFRAELDSVRDLLKKPEFAAPVP 114
Query: 132 -----ANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGE 186
A S A A KSQ G + G + T ++ S A ++C
Sbjct: 115 LNRAPALSSSAAPRAKKPQKSQRGGTNVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEA 174
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
IL KLM K FN PVD+V L++ DY DI+K PMDLGTV+ KLE+ Y P +FA DV
Sbjct: 175 ILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADV 234
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-----QQRQGILGRGKAR---- 297
RLTFNNA+ YNP+GH V+ MA L+ FE ++ + K+ ++ + R ++
Sbjct: 235 RLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAATEKHVEVDRADSKRRKT 294
Query: 298 ---------------------EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL 336
+M+ EE+ A G L + E + ++++ N L
Sbjct: 295 PPVDRSDVSMECARQTEPETPKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL 354
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFVDNF--KKAEKDKTEKEPMCSQVAVAVAAPVVIER 394
S G EIE+DI A+ +D L +L + VD + +K + + + EP ++
Sbjct: 355 SGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTN 413
Query: 395 SKKGDVAAEEEVDIGEEIPVQNYPPVVIERD 425
KG EE+VDI N P+++++D
Sbjct: 414 PCKGGEPIEEDVDI-----CGNASPIMLDKD 439
>gi|413937647|gb|AFW72198.1| global transcription factor group E [Zea mays]
Length = 696
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 182/391 (46%), Gaps = 62/391 (15%)
Query: 91 SLPESDYVTFN-LGAYTRREL-----------KDLRKRLVSDLERVRNLGSRI------- 131
S+P+ ++ N +G +RE+ + LRKR ++L+ VR+L +
Sbjct: 55 SVPKRKCISLNSVGFDVKREILVPSKMSSSERRYLRKRFRAELDSVRDLLKKPEFAAPVP 114
Query: 132 -----ANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGE 186
A S A A KSQ G + G + T ++ S A ++C
Sbjct: 115 LNRAPALSSSAAPRAKKPQKSQRGGTNVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEA 174
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
IL KLM K FN PVD+V L++ DY DI+K PMDLGTV+ KLE+ Y P +FA DV
Sbjct: 175 ILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADV 234
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-----QQRQGILGRGKAR---- 297
RLTFNNA+ YNP+GH V+ MA L+ FE ++ + K+ ++ + R ++
Sbjct: 235 RLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAATEKHVEVDRADSKRRKT 294
Query: 298 ---------------------EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL 336
+M+ EE+ A G L + E + ++++ N L
Sbjct: 295 PPVDRSDVSMECARQTEPETPKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL 354
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFVDNF--KKAEKDKTEKEPMCSQVAVAVAAPVVIER 394
S G EIE+DI A+ +D L +L + VD + +K + + + EP ++
Sbjct: 355 SGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTN 413
Query: 395 SKKGDVAAEEEVDIGEEIPVQNYPPVVIERD 425
KG EE+VDI N P+++++D
Sbjct: 414 PCKGGEPIEEDVDI-----CGNASPIMLDKD 439
>gi|413937648|gb|AFW72199.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 728
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 182/391 (46%), Gaps = 62/391 (15%)
Query: 91 SLPESDYVTFN-LGAYTRREL-----------KDLRKRLVSDLERVRNLGSRI------- 131
S+P+ ++ N +G +RE+ + LRKR ++L+ VR+L +
Sbjct: 71 SVPKRKCISLNSVGFDVKREILVPSKMSSSERRYLRKRFRAELDSVRDLLKKPEFAAPVP 130
Query: 132 -----ANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGE 186
A S A A KSQ G + G + T ++ S A ++C
Sbjct: 131 LNRAPALSSSAAPRAKKPQKSQRGGTNVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEA 190
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
IL KLM K FN PVD+V L++ DY DI+K PMDLGTV+ KLE+ Y P +FA DV
Sbjct: 191 ILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADV 250
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-----QQRQGILGRGKAR---- 297
RLTFNNA+ YNP+GH V+ MA L+ FE ++ + K+ ++ + R ++
Sbjct: 251 RLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAATEKHVEVDRADSKRRKT 310
Query: 298 ---------------------EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL 336
+M+ EE+ A G L + E + ++++ N L
Sbjct: 311 PPVDRSDVSMECARQTEPETPKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL 370
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFVDNF--KKAEKDKTEKEPMCSQVAVAVAAPVVIER 394
S G EIE+DI A+ +D L +L + VD + +K + + + EP ++
Sbjct: 371 SGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTN 429
Query: 395 SKKGDVAAEEEVDIGEEIPVQNYPPVVIERD 425
KG EE+VDI N P+++++D
Sbjct: 430 PCKGGEPIEEDVDI-----CGNASPIMLDKD 455
>gi|413937644|gb|AFW72195.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 494
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 182/391 (46%), Gaps = 62/391 (15%)
Query: 91 SLPESDYVTFN-LGAYTRREL-----------KDLRKRLVSDLERVRNLGSRI------- 131
S+P+ ++ N +G +RE+ + LRKR ++L+ VR+L +
Sbjct: 55 SVPKRKCISLNSVGFDVKREILVPSKMSSSERRYLRKRFRAELDSVRDLLKKPEFAAPVP 114
Query: 132 -----ANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGE 186
A S A A KSQ G + G + T ++ S A ++C
Sbjct: 115 LNRAPALSSSAAPRAKKPQKSQRGGTNVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEA 174
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
IL KLM K FN PVD+V L++ DY DI+K PMDLGTV+ KLE+ Y P +FA DV
Sbjct: 175 ILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADV 234
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-----QQRQGILGRGKAR---- 297
RLTFNNA+ YNP+GH V+ MA L+ FE ++ + K+ ++ + R ++
Sbjct: 235 RLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAATEKHVEVDRADSKRRKT 294
Query: 298 ---------------------EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL 336
+M+ EE+ A G L + E + ++++ N L
Sbjct: 295 PPVDRSDVSMECARQTEPETPKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL 354
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFVDNF--KKAEKDKTEKEPMCSQVAVAVAAPVVIER 394
S G EIE+DI A+ +D L +L + VD + +K + + + EP ++
Sbjct: 355 SGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTN 413
Query: 395 SKKGDVAAEEEVDIGEEIPVQNYPPVVIERD 425
KG EE+VDI N P+++++D
Sbjct: 414 PCKGGEPIEEDVDI-----CGNASPIMLDKD 439
>gi|356560519|ref|XP_003548539.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 744
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 187/386 (48%), Gaps = 74/386 (19%)
Query: 111 KDLRKRLVSDLERVRNLGSRI---------------------ANSDFQATHAYPTTKSQN 149
KDL +RL S+LE++R L +I N+ + + S +
Sbjct: 78 KDLVQRLRSELEQIRLLQKKIEQQRTNGVALSSSSDILSCSNGNNGHRVERDKKPSMSSS 137
Query: 150 RGGSKRANPFGNPKAK-----RAAAG------TXSLTSTKNAM--RRCGEILTKLMKDKQ 196
G+K P GN K R ++G + ST NAM + C +L +LM +
Sbjct: 138 APGNK-VKPSGNKNQKSRGWNRGSSGKFESAVQSASPSTANAMLMKDCELLLKRLMSHQY 196
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
W F TPVDVV L L DY IIK+PMDLGTV+SKL Y P EFA+DV+LTF+NA+ Y
Sbjct: 197 AWVFKTPVDVVKLNLPDYFTIIKRPMDLGTVKSKLAAGEYAGPLEFADDVKLTFSNAMNY 256
Query: 257 NPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----------GRGKARE-------- 298
NP G+ V+ MA+TL+ FE ++ + K+ + +L G R+
Sbjct: 257 NPSGNDVHLMADTLNKYFELRWKAIEKKLPKSDVLPIPAKPDNSEGVKTKRQAPPSKKRK 316
Query: 299 -----------------MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGD 341
MS +EK LGR LE L E ++ +K+ +S NG C D
Sbjct: 317 IASLPPQPKVMPPTKKVMSDQEKHDLGRELESLLGEMPMHIIDFLKE-HSSNGR-ECGDD 374
Query: 342 EIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPVVIE-RSKKGDV 400
EIE+DI+ L +DTL L + +D+F + ++ K C + + P + KG+
Sbjct: 375 EIEIDIDDLSDDTLFTLRKLLDDFLQEKQKNKAKVEACEVEVLNDSGPSNSSLQPFKGND 434
Query: 401 AAEEEVDI-GEEIPVQNYPPVVIERD 425
A+EEVDI G E PV +Y V IE+D
Sbjct: 435 PADEEVDIGGNEPPVSSYSHVEIEKD 460
>gi|297814970|ref|XP_002875368.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
gi|297321206|gb|EFH51627.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 139/288 (48%), Gaps = 60/288 (20%)
Query: 125 RNLGSRIANS----DF------QATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSL 174
+ L SR++NS DF + H +++ NRG S + F + K S+
Sbjct: 120 QKLSSRVSNSKKPSDFAMGSGKKVRHQTGSSRGWNRGTSGK---FESSK--------ESM 168
Query: 175 TSTKNA--MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE 232
TST N M++C +L KL W F PVDVV L + DY IIK PMDLGTV+ L
Sbjct: 169 TSTTNITLMKQCDTLLKKLWSHPHSWVFQAPVDVVKLNIPDYLTIIKHPMDLGTVKKNLA 228
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-------- 284
+ VY P EFA DVRLTF NA+ YNP GH V+ M + LS FE ++ + K+
Sbjct: 229 SGVYSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIEKKLPACSMQT 288
Query: 285 ---------QQRQGILGRGKARE------------------MSLEEKMALGRSLEELPQE 317
+R+ + A++ M+ EE+ LGR LE L E
Sbjct: 289 LPAITLEPNDERKAAISVPPAKKRKMASPVRESVPEPVKPLMTAEERHRLGRQLESLLDE 348
Query: 318 ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF 365
++ +KK +S G ++ DEIE+DI+ L ++ L L +D +
Sbjct: 349 LPAHIIDFLKKHSSNGGEIA--EDEIEIDIDVLSDEVLVTLRNLLDEY 394
>gi|18395937|ref|NP_566151.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
gi|75163747|sp|Q93ZB7.1|GTE11_ARATH RecName: Full=Transcription factor GTE11; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 10; Short=AtBET10;
AltName: Full=Bromodomain-containing protein GTE11;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E11
gi|16323117|gb|AAL15293.1| AT3g01770/F28J7_10 [Arabidopsis thaliana]
gi|20466526|gb|AAM20580.1| unknown protein [Arabidopsis thaliana]
gi|22136456|gb|AAM91306.1| unknown protein [Arabidopsis thaliana]
gi|332640191|gb|AEE73712.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
Length = 620
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 170/362 (46%), Gaps = 60/362 (16%)
Query: 107 RRELKDLR--KRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNR---GGSKRANPFGN 161
R+EL+ LR ++ V DL + S+I S + + P + +R G KR PF
Sbjct: 61 RQELEQLRSFQKSVGDLLPI----SKIVTSTPASNVSRPKSFGMSRCSTGPGKRVLPFTA 116
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKP 221
K + TST M++C +L +LM + W FNTPVDVV L + DY IIK P
Sbjct: 117 TKPEPVT------TSTMLRMKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHP 170
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MDLGTV+SKL + Y P EF+ DVRLTF NA+ YNP + VY A+TLS FE ++ +
Sbjct: 171 MDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTI 230
Query: 282 SKQQ---------------------------------QRQGILGRGKAREMSLEEKMALG 308
K+ +R +L K R M+ E+++ LG
Sbjct: 231 EKKSSGTKSEPSNLATLAHKDIAIPEPVAKKRKMNAVKRNSLLEPAK-RVMTDEDRVKLG 289
Query: 309 R---SLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF 365
R SL E P + + L R+ + DEIE+DI L +D L QL D F
Sbjct: 290 RDLGSLTEFPVQIINFL------RDHSSKEERSGDDEIEIDINDLSHDALFQLRDLFDEF 343
Query: 366 -KKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGE-EIPVQNYPPVVIE 423
++ +K + EP ++ + + G +E+VDIG E P+ + V E
Sbjct: 344 LRENQKKDSNGEPCVLELLHGSGPGNSLTQHCDGSELEDEDVDIGNYEHPISHISTVRTE 403
Query: 424 RD 425
+D
Sbjct: 404 KD 405
>gi|297850172|ref|XP_002892967.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
gi|297338809|gb|EFH69226.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
Length = 482
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 98 VTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRAN 157
+ +L + ++ EL++L+++L S+L+ VR+L R + K+ G +K+
Sbjct: 53 LKISLSSISKLELRNLKRKLKSELDEVRSLIKRFDPEVNLGGNIGSMAKTGVVGRNKKLK 112
Query: 158 PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDI 217
GN K++ G T + C +LTKLMK K W F+ PVD L L DYH+I
Sbjct: 113 T-GNGGGKKSGHGAEK--GTVQIFKNCNSLLTKLMKHKCAWVFHVPVDAEGLGLHDYHNI 169
Query: 218 IKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
+K+PMDLGTV++KL N+YK P +FAEDVRLTFNNA++YNP GH V+ AE L FE
Sbjct: 170 VKEPMDLGTVKTKLGKNLYKSPLDFAEDVRLTFNNAILYNPVGHDVHRFAELLLNMFEDK 229
Query: 278 FQKLSKQ 284
+ + Q
Sbjct: 230 WVSIEMQ 236
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+++LEEK L L++LP ++L ++ I+KK N LS DEIELDI++LD +TL
Sbjct: 323 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNP---ELSQQDDEIELDIDSLDINTLW 379
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQ 381
+L RFV +K++ K E + S+
Sbjct: 380 ELYRFVTGYKESLSKKNEAQGFGSE 404
>gi|224116690|ref|XP_002317367.1| global transcription factor group [Populus trichocarpa]
gi|222860432|gb|EEE97979.1| global transcription factor group [Populus trichocarpa]
Length = 347
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 108/179 (60%), Gaps = 12/179 (6%)
Query: 98 VTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRAN 157
V NL + + E+K L+++LV++L +VR+L ++ + + + S N + R
Sbjct: 6 VKINLNSRPKSEIKHLKRKLVNELHQVRSLRKKLDSIEMSQS-------SFNDNLNNRIT 58
Query: 158 PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDI 217
GN R +K ++ CGE+L KLMK + GW FN PVDV L+L DY I
Sbjct: 59 --GNSGGHRIETLDRF---SKYLVKECGELLGKLMKHQYGWVFNVPVDVKMLKLHDYFKI 113
Query: 218 IKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
IK PMDLGTV+S+L N YK P+EFAEDVRLTFNNA+ YN KG V+ MA+TL FE+
Sbjct: 114 IKHPMDLGTVKSRLSKNWYKSPKEFAEDVRLTFNNAMKYNEKGQDVHTMADTLLKIFEE 172
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 298 EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQ 357
+M+ EEK L SL+ LP E+L ++ I++KRN G L DEIE+DI++ DN+TL +
Sbjct: 273 KMTYEEKQKLSISLQSLPSEKLESVVQIIRKRNPG---LFQQEDEIEVDIDSFDNETLWE 329
Query: 358 LVRFVDNFKKA 368
L V N++K+
Sbjct: 330 LHSNVTNYRKS 340
>gi|306922427|ref|NP_001105214.2| LOC542112 [Zea mays]
Length = 696
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 174/374 (46%), Gaps = 57/374 (15%)
Query: 91 SLPESDYVTFN-LGAYTRREL-----------KDLRKRLVSDLERVRNLGSRI------- 131
S+P+ ++ N +G +RE+ + LRKR ++L+ VR+L +
Sbjct: 55 SVPKRKCISLNSVGFDVKREILVPSKMSSSERRYLRKRFRAELDSVRDLLKKPEFAAPVP 114
Query: 132 -----ANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGE 186
A S A A KSQ G + G + T ++ S A ++C
Sbjct: 115 LNRAPALSSSAAPRAKKPQKSQRGGTNVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEA 174
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
IL KLM K FN PVD+V L++ DY DI+K PMDLGTV+ KLE+ Y P +FA DV
Sbjct: 175 ILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADV 234
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-----QQRQGILGRGKAR---- 297
RLTFNNA+ YNP+GH V+ MA L+ FE ++ + K+ ++ + R ++
Sbjct: 235 RLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAATEKHVEVDRADSKRRKT 294
Query: 298 ---------------------EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL 336
+M+ EE+ A G L + E + ++++ N L
Sbjct: 295 PPVDRSDVSMECARQTEPETPKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL 354
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFVDNF--KKAEKDKTEKEPMCSQVAVAVAAPVVIER 394
S G EIE+DI A+ +D L +L + VD + +K + + + EP ++
Sbjct: 355 SGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTN 413
Query: 395 SKKGDVAAEEEVDI 408
KG EE+VDI
Sbjct: 414 PCKGGEPIEEDVDI 427
>gi|29569106|gb|AAO84020.1| global transcription factor group E [Zea mays]
Length = 696
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 174/374 (46%), Gaps = 57/374 (15%)
Query: 91 SLPESDYVTFN-LGAYTRREL-----------KDLRKRLVSDLERVRNLGSRI------- 131
S+P+ ++ N +G +RE+ + LRKR ++L+ VR+L +
Sbjct: 55 SVPKRKCISLNSVGFDVKREILVPSKMSSSERRYLRKRFRAELDSVRDLLKKPEFAAPVP 114
Query: 132 -----ANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGE 186
A S A A KSQ G + G + T ++ S A ++C
Sbjct: 115 LNRAPALSSSAAPRAKKPQKSQRGGTNVIRGAKGRFLPTKPRPETSTVLSEAAAFKQCEA 174
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
IL KLM K FN PVD+V L++ DY DI+K PMDLGTV+ KLE+ Y P +FA DV
Sbjct: 175 ILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADV 234
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-----QQRQGILGRGKAR---- 297
RLTFNNA+ YNP+GH V+ MA L+ FE ++ + K+ ++ + R ++
Sbjct: 235 RLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLASAATEKHVEVDRADSKRRKT 294
Query: 298 ---------------------EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL 336
+M+ EE+ A G L + E + ++++ N L
Sbjct: 295 PPVDRSDVSMECARQTEPETPKMTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL 354
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFVDNF--KKAEKDKTEKEPMCSQVAVAVAAPVVIER 394
S G EIE+DI A+ +D L +L + VD + +K + + + EP ++
Sbjct: 355 SGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVSGLSHSSTN 413
Query: 395 SKKGDVAAEEEVDI 408
KG EE+VDI
Sbjct: 414 PCKGGEPIEEDVDI 427
>gi|9294219|dbj|BAB02121.1| unnamed protein product [Arabidopsis thaliana]
Length = 818
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 158/338 (46%), Gaps = 64/338 (18%)
Query: 125 RNLGSRIANS----DF------QATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSL 174
+ + SR++NS DF + H T++ NRG S + + ++
Sbjct: 120 QKISSRVSNSKKPSDFAVGSGKKVRHQNGTSRGWNRGTSGKFE-----------SSKETM 168
Query: 175 TSTKNA--MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE 232
TST N M++C +L KL W F PVDVV L + DY IK PMDLGTV+ L
Sbjct: 169 TSTPNITLMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLA 228
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-------- 284
+ VY P EFA DVRLTF NA+ YNP GH V+ M + LS FE ++ + K+
Sbjct: 229 SGVYSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQT 288
Query: 285 ---------QQRQGILGRGKARE------------------MSLEEKMALGRSLEELPQE 317
+R+ + A++ M+ E+ LGR LE L E
Sbjct: 289 LPAVTLEPNDERKAAISVPPAKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLDE 348
Query: 318 ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF-KKAEKDKTEKE 376
++ +KK NS G ++ DEIE+DI+ L ++ L L +D + + E +T E
Sbjct: 349 LPAHIIDFLKKHNSNGGEIA--EDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNVE 406
Query: 377 PMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPV 414
P C + + P ++G+ A+E VD G E P+
Sbjct: 407 P-CEIELINGSRPSN-SSLQRGNEMADEYVD-GNEPPI 441
>gi|15232127|ref|NP_189362.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|327488239|sp|Q9LK27.2|GTE8_ARATH RecName: Full=Transcription factor GTE8; AltName:
Full=Bromodomain-containing protein GTE8; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E8
gi|332643763|gb|AEE77284.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 813
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 158/338 (46%), Gaps = 64/338 (18%)
Query: 125 RNLGSRIANS----DF------QATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSL 174
+ + SR++NS DF + H T++ NRG S + + ++
Sbjct: 120 QKISSRVSNSKKPSDFAVGSGKKVRHQNGTSRGWNRGTSGKFE-----------SSKETM 168
Query: 175 TSTKNA--MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE 232
TST N M++C +L KL W F PVDVV L + DY IK PMDLGTV+ L
Sbjct: 169 TSTPNITLMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLA 228
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-------- 284
+ VY P EFA DVRLTF NA+ YNP GH V+ M + LS FE ++ + K+
Sbjct: 229 SGVYSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQT 288
Query: 285 ---------QQRQGILGRGKARE------------------MSLEEKMALGRSLEELPQE 317
+R+ + A++ M+ E+ LGR LE L E
Sbjct: 289 LPAVTLEPNDERKAAISVPPAKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLDE 348
Query: 318 ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF-KKAEKDKTEKE 376
++ +KK NS G ++ DEIE+DI+ L ++ L L +D + + E +T E
Sbjct: 349 LPAHIIDFLKKHNSNGGEIA--EDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNVE 406
Query: 377 PMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPV 414
P C + + P ++G+ A+E VD G E P+
Sbjct: 407 P-CEIELINGSRPSN-SSLQRGNEMADEYVD-GNEPPI 441
>gi|17064912|gb|AAL32610.1| Unknown protein [Arabidopsis thaliana]
gi|20259928|gb|AAM13311.1| unknown protein [Arabidopsis thaliana]
Length = 503
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 64/338 (18%)
Query: 125 RNLGSRIANS----DF------QATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSL 174
+ + SR++NS DF + H T++ NRG S + F + K ++
Sbjct: 120 QKISSRVSNSKKPSDFAVGSGKKVRHQNGTSRGWNRGTSGK---FESSK--------ETM 168
Query: 175 TSTKNA--MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE 232
TST N M++C +L KL W F PVDVV L + DY IK PMDLGTV+ L
Sbjct: 169 TSTPNITLMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLA 228
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-------- 284
+ VY P EFA DVRLTF +A+ YNP GH V+ M + LS FE ++ + K+
Sbjct: 229 SGVYSSPHEFAADVRLTFTDAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQT 288
Query: 285 ---------QQRQGILGRGKARE------------------MSLEEKMALGRSLEELPQE 317
+R+ + A++ M+ E+ LGR LE L E
Sbjct: 289 LPAVTLEPNDERKAAISVPPAKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLDE 348
Query: 318 ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF-KKAEKDKTEKE 376
++ +KK NS G ++ DEIE+DI+ L ++ L L +D + + E +T E
Sbjct: 349 LPAHIIDFLKKHNSNGGEIA--EDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNVE 406
Query: 377 PMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPV 414
P C + + P ++G+ A+E VD G E P+
Sbjct: 407 P-CEIELINGSRPSN-SSLQRGNEMADEYVD-GNEPPI 441
>gi|334185652|ref|NP_001189985.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|332643764|gb|AEE77285.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 764
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 158/338 (46%), Gaps = 64/338 (18%)
Query: 125 RNLGSRIANS----DF------QATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSL 174
+ + SR++NS DF + H T++ NRG S + + ++
Sbjct: 71 QKISSRVSNSKKPSDFAVGSGKKVRHQNGTSRGWNRGTSGKFE-----------SSKETM 119
Query: 175 TSTKNA--MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE 232
TST N M++C +L KL W F PVDVV L + DY IK PMDLGTV+ L
Sbjct: 120 TSTPNITLMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLA 179
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-------- 284
+ VY P EFA DVRLTF NA+ YNP GH V+ M + LS FE ++ + K+
Sbjct: 180 SGVYSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQT 239
Query: 285 ---------QQRQGILGRGKARE------------------MSLEEKMALGRSLEELPQE 317
+R+ + A++ M+ E+ LGR LE L E
Sbjct: 240 LPAVTLEPNDERKAAISVPPAKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLDE 299
Query: 318 ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF-KKAEKDKTEKE 376
++ +KK NS G ++ DEIE+DI+ L ++ L L +D + + E +T E
Sbjct: 300 LPAHIIDFLKKHNSNGGEIA--EDEIEIDIDVLSDEVLVTLRNLLDEYIQNKEAKQTNVE 357
Query: 377 PMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPV 414
P C + + P ++G+ A+E VD G E P+
Sbjct: 358 P-CEIELINGSRPSN-SSLQRGNEMADEYVD-GNEPPI 392
>gi|440790084|gb|ELR11372.1| Bromodomain containing protein [Acanthamoeba castellanii str. Neff]
Length = 844
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 116/221 (52%), Gaps = 41/221 (18%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
A+++C +L LM K GW FN PVD ++L + DY D+IK PMDLGT++ +L++ Y+
Sbjct: 140 ALKQCQVLLKTLMTHKFGWPFNQPVDPIALNIPDYFDVIKHPMDLGTIKEQLDSGSYETE 199
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL-SKQQQR----------- 287
+EFAEDVRL F N YN G + MA TLS+ F + F+ L +K ++R
Sbjct: 200 EEFAEDVRLVFTNTFTYNQPGSDIVVMASTLSSLFNEKFEILKAKIEERGRDAPEGVEET 259
Query: 288 ----------------------QGILGRGKA----REMSLEEKMALGRSLEELPQEELGK 321
G GR A R M+ EEK L ++ LP + LG
Sbjct: 260 LKELRDSMSSVQRELERIKKTPNGRAGRAGAAEDQRPMTFEEKKKLSHAINNLPSDNLGM 319
Query: 322 LLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
++ I+ +R L+ G+EIE+DI+AL+ TL L R+V
Sbjct: 320 VVKIIHERMP---QLTSSGEEIEIDIDALNPATLRHLERYV 357
>gi|297828570|ref|XP_002882167.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
gi|297328007|gb|EFH58426.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 151/333 (45%), Gaps = 58/333 (17%)
Query: 151 GGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLR 210
G KR PF K + TST M++C +L +LM + W FNTPVD+V L
Sbjct: 103 GPGKRVLPFSATKPEPVT------TSTMLRMKQCETLLKRLMSQQHCWLFNTPVDMVKLN 156
Query: 211 LRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETL 270
+ DY IIK PMDLGTV+SKL + Y P EF+ DVRLTF NA+ YNP + VY A+TL
Sbjct: 157 IPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTL 216
Query: 271 SAKFEQMFQKLSKQQ-------QRQGILGRGKA-------------------------RE 298
S FE ++ +K+ G L R R
Sbjct: 217 SKFFEVRWKTFNKKSSGTKSEPSNLGTLARKDIAMPEPLAKKRKMNAVNHDSLLEPAKRV 276
Query: 299 MSLEEKMALGR---SLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
M+ E+++ LGR SL E P + ++ ++ +S G DEIE+DI L +D L
Sbjct: 277 MTDEDRVKLGRDLGSLTEFPVQ----IINFLRDHSSKEG--RSGDDEIEIDINDLSHDAL 330
Query: 356 SQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPV-VIERSKKGDVAAEEEVDIGE-EIP 413
QL D F + + K C + + P + + G +E+VDIG E P
Sbjct: 331 FQLRDLFDEFLRENQRKDINGEPCELELLDGSGPGNSLTQHCGGSEMEDEDVDIGNYEHP 390
Query: 414 VQNYPPVVIERD---------DASSGTSTSSTD 437
+ P V E+D DAS G+ D
Sbjct: 391 RSHIPSVRTEKDSVSGLNQLEDASKGSLIEGAD 423
>gi|428176256|gb|EKX45141.1| hypothetical protein GUITHDRAFT_108789 [Guillardia theta CCMP2712]
Length = 220
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 113/212 (53%), Gaps = 33/212 (15%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+++CG IL +L W FN PVD L L DYH +IK+PMDLGTV+S LE V PQ
Sbjct: 14 VKKCGNILKQLSAHPNSWVFNEPVDAEKLGLPDYHIVIKRPMDLGTVKSNLEKGVLANPQ 73
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL-----GRGK 295
+F +DV L F NA+ YNP+GH V+ MA+TL FE K Q +GI+ G
Sbjct: 74 QFKDDVLLVFRNAMTYNPEGHDVHVMAKTLKVLFE------GKWSQNEGIIMDAYNNAGS 127
Query: 296 ARE-----------------MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSC 338
A E M+ EEK L S+ +LP + L ++ + ++NS L
Sbjct: 128 ASESTKSKAGSEDSSLDNVPMTYEEKRELSASMNKLPGKRLASVVSFIHEKNS--KILMQ 185
Query: 339 HG---DEIELDIEALDNDTLSQLVRFVDNFKK 367
G DE+E+DI+ LDN TL QL R + KK
Sbjct: 186 SGDDPDELEVDIDKLDNATLRQLERIANTKKK 217
>gi|328865269|gb|EGG13655.1| bromodomain-containing protein [Dictyostelium fasciculatum]
Length = 1155
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 50/304 (16%)
Query: 166 RAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLG 225
R G + S AM+RC +IL L + + F PVD V+L + DY D++K PMD G
Sbjct: 438 RRRVGPPTENSLTGAMKRCFDILETLSNHQHSYPFLAPVDPVALGILDYFDVVKHPMDFG 497
Query: 226 TVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL---- 281
T+R+ L + VY+ +EFA D RL F+NA YNP + V+ MA TL FE+ + KL
Sbjct: 498 TIRNLLLSGVYQEMEEFAIDCRLVFSNAKDYNPPNNPVHIMAITLEDIFERKYSKLQNTP 557
Query: 282 --------------------SKQQQRQGILGRGKAR-----EMSLEEKMALGRSLEELPQ 316
+K Q++ + ++R +M+LEEK LG ++ LP
Sbjct: 558 NLETAEEVSEEERIKKLTEENKHMQKELEKMKRESRKPKQPQMTLEEKTQLGTNISFLPP 617
Query: 317 EELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKD----- 371
E L L+ IV + + DEI +D+E LDN TL ++ +FV + + ++D
Sbjct: 618 ERLRDLISIV-----SHTLPNTAQDEIVIDLEKLDNSTLRKMEQFVFSCLREQEDYGNDI 672
Query: 372 -KTEKEPMCSQVAVA---------VAAPVVIERSKKGDVAAEEEVDIGEEIPVQNYPPVV 421
+ E E + Q+ + ++ P+ +K + EE+V I +++ ++ YPPV+
Sbjct: 673 KQKEIESVTKQLNMVNRGLRHKKNISKPISKATGRKMALRKEEDV-IVDDVEMKEYPPVI 731
Query: 422 IERD 425
IE+D
Sbjct: 732 IEKD 735
>gi|255536997|ref|XP_002509565.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223549464|gb|EEF50952.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 718
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 180/393 (45%), Gaps = 64/393 (16%)
Query: 109 ELKDLRKRLVSDLERVRNLGSRIANSDFQATHAY--------------PTTKSQNR---- 150
E K+L +RL +LE++R L ++ A P N+
Sbjct: 5 ERKNLIRRLRFELEQIRLLQKKLEVQKINAVTLSSSSDILSCSNGTNGPRAAKFNKSAML 64
Query: 151 --GGSKRANPFGNPKA-KRAAAG--------TXSLTSTKNAMRRCGEILTKLMKDKQGWA 199
G K+ANP + R+++G + L + M++C +L++LM + GW
Sbjct: 65 TSGPVKKANPSDKIREWNRSSSGRFKSTKQPSAPLATNMMVMKQCETLLSRLMSHQYGWV 124
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVDVV L + DY+ IIK PMDLGT++S + + +Y P EF DVRLTF NA+ YNPK
Sbjct: 125 FKEPVDVVKLNIPDYYTIIKHPMDLGTIKSNICSGLYSSPLEFLADVRLTFRNAMEYNPK 184
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQR---QGILGRGKARE------------------ 298
G V+ MA+TLS FE ++ + K+ + G+ + RE
Sbjct: 185 GSDVHIMADTLSKFFEVRWKAIEKKLPKIDTHGLPSKSGPREDLQITEISPIKKRKISSY 244
Query: 299 ------------MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELD 346
M+ +EK LG+ LE L E ++ +K +S NG + +
Sbjct: 245 QHEIVAVPVRRVMTDDEKQKLGKELESLLGEMPIHIIDFLKD-HSSNGRDAGEDEIEIDI 303
Query: 347 IEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEV 406
+ D+ + D + +K + EP ++ + +KG+ AA+E+V
Sbjct: 304 DDLSDDTLFTLRRLLDDYLLEKQKSQARVEPCEIELLNESGLSNSSMQQQKGNDAADEDV 363
Query: 407 DI-GEEIPVQNYPPVVIERDDASSGTSTSSTDS 438
DI G E PV +YPPV IE+D + GT S+ S
Sbjct: 364 DIGGNEPPVSSYPPVEIEKDTGNKGTKCISSGS 396
>gi|6016737|gb|AAF01563.1|AC009325_33 hypothetical protein [Arabidopsis thaliana]
gi|6091741|gb|AAF03453.1|AC010797_29 hypothetical protein [Arabidopsis thaliana]
Length = 601
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 167/367 (45%), Gaps = 80/367 (21%)
Query: 107 RRELKDLR--KRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNR---GGSKRANPFGN 161
R+EL+ LR ++ V DL + S+I S + + P + +R G KR PF
Sbjct: 61 RQELEQLRSFQKSVGDLLPI----SKIVTSTPASNVSRPKSFGMSRCSTGPGKRVLPFTA 116
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKP 221
K + TST M++C +L +LM + W FNTPVDVV L + DY IIK P
Sbjct: 117 TKPEPVT------TSTMLRMKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHP 170
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MDLGTV+SKL + Y P EF+ DVRLTF NA+ YNP + VY A+TLS FE ++ +
Sbjct: 171 MDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTI 230
Query: 282 SKQQ---------------------------------QRQGILGRGKAREMSLEEKMALG 308
K+ +R +L K R M+ E+++ LG
Sbjct: 231 EKKSSGTKSEPSNLATLAHKDIAIPEPVAKKRKMNAVKRNSLLEPAK-RVMTDEDRVKLG 289
Query: 309 R---SLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF 365
R SL E P + + L R+ + DEIE+DI L +D L QL D F
Sbjct: 290 RDLGSLTEFPVQIINFL------RDHSSKEERSGDDEIEIDINDLSHDALFQLRDLFDEF 343
Query: 366 -KKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGE-EIPVQNYPPVVIE 423
++ +K + EP +E+VDIG E P+ + V E
Sbjct: 344 LRENQKKDSNGEPWSE--------------------LEDEDVDIGNYEHPISHISTVRTE 383
Query: 424 RDDASSG 430
+ D+ G
Sbjct: 384 KADSVGG 390
>gi|242065686|ref|XP_002454132.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
gi|241933963|gb|EES07108.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
Length = 711
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 170/361 (47%), Gaps = 50/361 (13%)
Query: 109 ELKDLRKRLVSDLERVRNLGSR--------IANSDFQATHAYPTTKSQNRGGSKRANPFG 160
E + LRKR ++L+ VR+L + ++ + ++ A P K + N
Sbjct: 88 ERRYLRKRFRAELDSVRDLLKKPEFAAPVPLSRAPALSSSAAPRAKKPQKSQRGVTNVIR 147
Query: 161 NPKAK----RAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHD 216
K + + ++ S ++C IL KLM K FN PVDV L++ DY D
Sbjct: 148 GAKGRFLPTKPRPEPTTVLSEAAVFKQCEAILKKLMTQKYSHIFNVPVDVDKLQIPDYFD 207
Query: 217 IIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
I+K PMDLGTV+ KLE+ Y P +FA DVRLTFNNA+ YNPKGH V+ MA L+ FE
Sbjct: 208 IVKTPMDLGTVQKKLESGSYTSPSDFAADVRLTFNNAMAYNPKGHAVHDMAIQLNKMFES 267
Query: 277 MFQKLSKQ-----QQRQGILGRGKAR-------------------------EMSLEEKMA 306
++ + K+ ++ + R ++ +M+ EE+ A
Sbjct: 268 RWRPIEKKLASAATEKHVEVDRADSKRRKTPPVDRSDVSTEGVRQTEPEKPKMTAEEREA 327
Query: 307 LGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF- 365
G SL + E + ++++ N + G EIE+DI+A+ +D L +L + VD +
Sbjct: 328 FGNSLASISDELPPHIFELLQQCIDSNTDMPGDG-EIEIDIQAVSDDMLFELKKHVDKYL 386
Query: 366 -KKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPVQNYPPVVIER 424
++ + + + EP ++ KG EE+VDI N P+++++
Sbjct: 387 QEREQSQQVKSEPSENEAVNVSGLSHSSTNPCKGGEPIEEDVDI-----CGNASPIMLDK 441
Query: 425 D 425
D
Sbjct: 442 D 442
>gi|281209232|gb|EFA83405.1| bromodomain-containing protein [Polysphondylium pallidum PN500]
Length = 1172
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 76/333 (22%)
Query: 163 KAKRAAAGTXSLTSTKNA-----MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDI 217
+A+R G S N M+RC EIL LM + G+ F PVD ++L + DY
Sbjct: 509 RAQRPTKGRRRFPSGDNISLVGPMKRCLEILDFLMNHQMGYPFLVPVDPIALNILDYFTY 568
Query: 218 IKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ- 276
IK PMD GT+R+ L + VY+ P EFA D RL F+NA +YNP + V+ MA+TL FE+
Sbjct: 569 IKHPMDFGTIRNSLLDGVYEAPDEFAADCRLVFSNARLYNPPANQVHIMAKTLEDLFEKK 628
Query: 277 ------------------------------MFQKLSKQQQRQGILGRGKARE----MSLE 302
M ++L K ++ GRG+ RE M+L+
Sbjct: 629 YAKALAEPPSPEIQPEESEKIKRLTMEMKTMTKELEKMKKESTGGGRGRYREAARPMTLD 688
Query: 303 EKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
EK LG ++ L L KL+ ++ N + +EIE+D+E LD TL +L +FV
Sbjct: 689 EKTHLGAAINALHPSNLPKLIQVISHTLDQNTA----QEEIEIDLEKLDTGTLRRLEQFV 744
Query: 363 ---------DNFK---KAEKDKT-EKEPMCSQVAVA-------------VAAPVVIERSK 396
F+ AE+ K E E + Q+ ++ P+ +
Sbjct: 745 ISCFQPGQYHQFQPHMAAEQQKQREIENVTKQINQLNRGLNSSKHKKHNISKPITKAHGR 804
Query: 397 KGDVAA----EEEVDIGEEIPVQNYPPVVIERD 425
K +A EEEV + + NYPPVVI+RD
Sbjct: 805 K--IAPPPKREEEVVVDDMTEKTNYPPVVIDRD 835
>gi|297797327|ref|XP_002866548.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312383|gb|EFH42807.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 486
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 188/391 (48%), Gaps = 68/391 (17%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIAN--SDFQATHAYPTTKSQNRG----- 151
+L +R E K+L +L +L++VR+L +IA+ SD Y S + G
Sbjct: 68 VLSLSKMSRSERKNLVHKLKMELQQVRDLSKKIASFSSDAVLLSPYNDIHSCSDGPRRPP 127
Query: 152 -----------GSKRANPFGNPKAKR----AAAGTXSLTSTKNAMRRCGEILTKLMKDKQ 196
G KR P N K + + ++++ + M+ C +L +L K
Sbjct: 128 PENFAKFVGSQGKKRP-PVRNDKHRTKKGPSRLNVPTISTVASVMKECETLLNRLWSHKL 186
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
GWAF TPVD V L + DY +IK PMDLGT+RS+L Y P +FA DVRLTF+N++ Y
Sbjct: 187 GWAFRTPVDPVMLNIPDYFTVIKHPMDLGTIRSRLRKGEYSSPLDFAADVRLTFSNSIAY 246
Query: 257 NPKGHYVYAMAETLSAKFEQMFQKLSKQ----------------------------QQRQ 288
NP G+ + MA+ +S FE ++ + K+ + +
Sbjct: 247 NPPGNQFHTMAQGISKYFETGWKSIEKKIPVTKPPVIPLTSSASLESEIPFEVAPLRNKS 306
Query: 289 GILGRGKAR------EMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDE 342
+ K R M+ +EK L + L L +E + ++++++ +G E
Sbjct: 307 AAMNESKLRVEPAKLVMTDDEKKKLSQDLVALEEEFPQNISDLLREQSGSDG--QSEEVE 364
Query: 343 IELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVA----APVVIERSKKG 398
IE+DIE L ++TL + + +D++ + +K EK C V + +P+ ++ KG
Sbjct: 365 IEIDIETLSDETLFMVRKLLDDYLREKKKSLEKSEPCEMEIVHDSGFSNSPL---QASKG 421
Query: 399 DVAAEEEVDI--GEEIPVQNYPPVVIERDDA 427
D+ +E+VDI G + V +YPP+ IE+D A
Sbjct: 422 DLQIDEDVDIVGGNDPSVSSYPPLKIEKDAA 452
>gi|225446551|ref|XP_002276195.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 654
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 76/112 (67%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ CG +L +LMK K GW FN+PVDV L L DY II PMDLGTV+S+L N YK P+
Sbjct: 308 FKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPR 367
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG 292
EFAEDVRLTF+NA+ YNPKG V+ MAE LS FE + + + R+ LG
Sbjct: 368 EFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEAEYSRELRLG 419
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 13/126 (10%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+ EEK L +L+ LP E+L ++ I+K+ NS +L DEIE+DI+++D +TL
Sbjct: 489 RDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNS---ALCQDNDEIEVDIDSVDAETLW 545
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVAVAV-------AAPVVIERSKKGDVAAEEEVDIG 409
+L R+V N+KK+ K + A A PVV E +++ ++ +E +I
Sbjct: 546 ELDRYVTNYKKSLSKNKRKAELAQARAEAARKIQERNPVPVVTEAARETNI---DERNIS 602
Query: 410 EEIPVQ 415
PVQ
Sbjct: 603 SSSPVQ 608
>gi|147820894|emb|CAN67478.1| hypothetical protein VITISV_035453 [Vitis vinifera]
Length = 660
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 76/112 (67%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ CG +L +LMK K GW FN+PVDV L L DY II PMDLGTV+S+L N YK P+
Sbjct: 308 FKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPR 367
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG 292
EFAEDVRLTF+NA+ YNPKG V+ MAE LS FE + + + R+ LG
Sbjct: 368 EFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEAEYSRELRLG 419
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 13/126 (10%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+ EEK L +L+ LP E+L ++ I+K+ NS +L DEIE+DI+++D +TL
Sbjct: 489 RDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNS---ALCQDNDEIEVDIDSVDAETLW 545
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVAVAV-------AAPVVIERSKKGDVAAEEEVDIG 409
+L R+V N+KK+ K + A A PVV E +++ ++ +E +I
Sbjct: 546 ELDRYVTNYKKSLSKNKRKAELAQARAEAARKIQERNPVPVVTEAARETNI---DERNIS 602
Query: 410 EEIPVQ 415
PVQ
Sbjct: 603 SSSPVQ 608
>gi|357149985|ref|XP_003575300.1| PREDICTED: transcription factor GTE9-like [Brachypodium distachyon]
Length = 705
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 166/364 (45%), Gaps = 58/364 (15%)
Query: 109 ELKDLRKRLVSDLERVRNLGSRIANSDFQATH-----------AYPTTKSQNRGGSKRAN 157
E + LRKR ++L+ VR+L + +F T A P K RG
Sbjct: 84 ERRYLRKRFRAELDSVRDL---LKKPEFLVTMPASRAPAFSSSAAPRPKKVQRGSHVVRG 140
Query: 158 PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDI 217
G + T ++ +++C IL KLM K FN PVDV L + DY+DI
Sbjct: 141 AKGRFLPTKPRPETTTVLPEAAVLKQCEAILKKLMTQKYSHIFNVPVDVEKLNIPDYNDI 200
Query: 218 IKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
+K PMDLGT++ KL++ Y P FA DVRLTFNNA+ YNP+GH V+ MA L+ FE
Sbjct: 201 VKHPMDLGTIKKKLDSGSYTSPSSFAADVRLTFNNAITYNPRGHAVHDMAIQLNKIFESR 260
Query: 278 FQKLSKQQQRQGI-----LGRGKARE-------------------------MSLEEKMAL 307
++ + K+ + R ++ M+ EEK +
Sbjct: 261 WKTVEKKLASATADPHVEVDRADSKRRKTPPVDCSDLSMECVRPTEIVKPTMTFEEKESF 320
Query: 308 GRSLEELPQE-EL-GKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF 365
G L L ++ EL G ++ ++++ + + EIE+DI AL +D L +L + V +
Sbjct: 321 GNCLASLSEDPELPGYIIDLLQQCIDSSNTDHLGDGEIEIDIHALSDDILLELKKQVGKY 380
Query: 366 KKAEKDKTEKEPMCSQVAVAVAAPVVIERSK----KGDVAAEEEVDIGEEIPVQNYPPVV 421
+ ++ K AV V+ + S KG EE+VDI N P++
Sbjct: 381 LQERDNQPTKSEPSENEAVNVSG---LSHSSTNPCKGGEPVEEDVDI-----CGNASPIL 432
Query: 422 IERD 425
IE+D
Sbjct: 433 IEKD 436
>gi|47497296|dbj|BAD19338.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848300|dbj|BAD22164.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|215768414|dbj|BAH00643.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 480
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 169/366 (46%), Gaps = 56/366 (15%)
Query: 109 ELKDLRKRLVSDLERVRNLGSR--------IANSDFQATHAYPTTKSQNRGGSKRANPFG 160
E + LRKR ++L+ VRNL + + + ++ A P K RG G
Sbjct: 88 ERRHLRKRFRTELDSVRNLLKKPEFAVPVPVNRAPALSSSAAPRGKKGQRGNHVVRGAKG 147
Query: 161 N--PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDII 218
P R A T + + ++C IL KLM K F++PVD V L + DY II
Sbjct: 148 RFLPTKPRPEAST--VLTEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQII 205
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
KKPMDLGT+R+KL++ Y P EFA DVRLTF+NA+ YNP+GH V+ A L+ FE +
Sbjct: 206 KKPMDLGTIRNKLDSGSYTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRW 265
Query: 279 QKLSKQ-----QQRQGILGRGKAR-------------------------------EMSLE 302
+ + K+ + + R ++ +M+ E
Sbjct: 266 RTIEKKLASIATEAHVEVDRADSKRRKTPPVDCSEVSTECVRPTESVRPTESVKPKMTFE 325
Query: 303 EKMALGRSLEELPQE-ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRF 361
EK + G L L ++ E+ + + ++ N + EIE+DI A+ +D L +L +
Sbjct: 326 EKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAVSDDLLFELKKH 385
Query: 362 VDNF--KKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPVQNYPP 419
VD + ++ + + + EP ++ A KG EE+VDI N P
Sbjct: 386 VDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDVDI-----CGNASP 440
Query: 420 VVIERD 425
++IE+D
Sbjct: 441 ILIEKD 446
>gi|115447147|ref|NP_001047353.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|47497295|dbj|BAD19337.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848299|dbj|BAD22163.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|113536884|dbj|BAF09267.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|222623188|gb|EEE57320.1| hypothetical protein OsJ_07416 [Oryza sativa Japonica Group]
Length = 714
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 172/367 (46%), Gaps = 58/367 (15%)
Query: 109 ELKDLRKRLVSDLERVRNLGSR--------IANSDFQATHAYPTTKSQNRGGSKRANPFG 160
E + LRKR ++L+ VRNL + + + ++ A P K RG G
Sbjct: 88 ERRHLRKRFRTELDSVRNLLKKPEFAVPVPVNRAPALSSSAAPRGKKGQRGNHVVRGAKG 147
Query: 161 N--PKAKRAAAGTXSLTSTKNAM-RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDI 217
P R A T T++A+ ++C IL KLM K F++PVD V L + DY I
Sbjct: 148 RFLPTKPRPEAST---VLTEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQI 204
Query: 218 IKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
IKKPMDLGT+R+KL++ Y P EFA DVRLTF+NA+ YNP+GH V+ A L+ FE
Sbjct: 205 IKKPMDLGTIRNKLDSGSYTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESR 264
Query: 278 FQKLSKQ-----QQRQGILGRGKAR-------------------------------EMSL 301
++ + K+ + + R ++ +M+
Sbjct: 265 WRTIEKKLASIATEAHVEVDRADSKRRKTPPVDCSEVSTECVRPTESVRPTESVKPKMTF 324
Query: 302 EEKMALGRSLEELPQE-ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVR 360
EEK + G L L ++ E+ + + ++ N + EIE+DI A+ +D L +L +
Sbjct: 325 EEKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAVSDDLLFELKK 384
Query: 361 FVDNF--KKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPVQNYP 418
VD + ++ + + + EP ++ A KG EE+VDI N
Sbjct: 385 HVDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDVDI-----CGNAS 439
Query: 419 PVVIERD 425
P++IE+D
Sbjct: 440 PILIEKD 446
>gi|13699186|dbj|BAB41205.1| kinase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 714
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 169/366 (46%), Gaps = 56/366 (15%)
Query: 109 ELKDLRKRLVSDLERVRNLGSR--------IANSDFQATHAYPTTKSQNRGGSKRANPFG 160
E + LRKR ++L+ VRNL + + + ++ A P K RG G
Sbjct: 88 ERRHLRKRFRTELDSVRNLLKKPEFAVPVPVNRAPALSSSAAPRGKKGQRGNHVVRGAKG 147
Query: 161 N--PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDII 218
P R A T + + ++C IL KLM K F++PVD V L + DY II
Sbjct: 148 RFLPTKPRPEAST--VLTEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQII 205
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
KKPMDLGT+R+KL++ Y P EFA DVRLTF+NA+ YNP+GH V+ A L+ FE +
Sbjct: 206 KKPMDLGTIRNKLDSGSYTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRW 265
Query: 279 QKLSKQ-----QQRQGILGRGKAR-------------------------------EMSLE 302
+ + K+ + + R ++ +M+ E
Sbjct: 266 RTIEKKLASIATEAHVEVDRADSKRRKTPPVDCSEVSTECVRPTESVRPTESVKPKMTFE 325
Query: 303 EKMALGRSLEELPQE-ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRF 361
EK + G L L ++ E+ + + ++ N + EIE+DI A+ +D L +L +
Sbjct: 326 EKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAVSDDLLFELKKH 385
Query: 362 VDNF--KKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPVQNYPP 419
VD + ++ + + + EP ++ A KG EE+VDI N P
Sbjct: 386 VDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDVDI-----CGNASP 440
Query: 420 VVIERD 425
++IE+D
Sbjct: 441 ILIEKD 446
>gi|218191119|gb|EEC73546.1| hypothetical protein OsI_07959 [Oryza sativa Indica Group]
Length = 714
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 169/366 (46%), Gaps = 56/366 (15%)
Query: 109 ELKDLRKRLVSDLERVRNLGSR--------IANSDFQATHAYPTTKSQNRGGSKRANPFG 160
E + LRKR ++L+ VRNL + + + ++ A P K RG G
Sbjct: 88 ERRHLRKRFRTELDSVRNLLKKPEFAVPVPVNRAPALSSSAAPRGKKGQRGNHVVRGAKG 147
Query: 161 N--PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDII 218
P R A T + + ++C IL KLM K F++PVD V L + DY II
Sbjct: 148 RFLPTKPRPEAST--VLTEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQII 205
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
KKPMDLGT+R+KL++ Y P EFA DVRLTF+NA+ YNP+GH V+ A L+ FE +
Sbjct: 206 KKPMDLGTIRNKLDSGSYTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRW 265
Query: 279 QKLSKQ-----QQRQGILGRGKAR-------------------------------EMSLE 302
+ + K+ + + R ++ +M+ E
Sbjct: 266 RTIEKKLASIATEAHVEVDRADSKRRKTPPVDCSEVSTECVRPTESVRPTESVKPKMTFE 325
Query: 303 EKMALGRSLEELPQE-ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRF 361
EK + G L L ++ E+ + + ++ N + EIE+DI A+ +D L +L +
Sbjct: 326 EKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAVSDDLLFELKKH 385
Query: 362 VDNF--KKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAAEEEVDIGEEIPVQNYPP 419
VD + ++ + + + EP ++ A KG EE+VDI N P
Sbjct: 386 VDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDVDI-----CGNASP 440
Query: 420 VVIERD 425
++IE+D
Sbjct: 441 ILIEKD 446
>gi|356546972|ref|XP_003541893.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 640
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 75/112 (66%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
++ C +L KLMK K GW F+TPVDV L L DY II PMDLGTV+S+L N Y+ P+
Sbjct: 302 LKSCSSLLEKLMKHKHGWVFDTPVDVEGLGLHDYFSIITHPMDLGTVKSRLNKNWYRSPK 361
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG 292
EFAEDVRLTF+NA+ YNPKG V+ MAE LS FE+ + + R+ G
Sbjct: 362 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLSNIFEERWAIIESNYNREMTYG 413
>gi|218195611|gb|EEC78038.1| hypothetical protein OsI_17470 [Oryza sativa Indica Group]
Length = 330
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 152/307 (49%), Gaps = 56/307 (18%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
+RC +IL KL KDK+ FN PV+V L L+DYH +IK PMDLGTVR+ L Y +
Sbjct: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ-KLSKQQQRQGILG-------- 292
FA D+RLTF+NAL YNP GH V+ A L A FE+M++ +S +Q IL
Sbjct: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPP 122
Query: 293 -----------RGKAREMSLEEKMALGRSLEELPQEELGKLLG-IVKKRNSGNGSLSCHG 340
+ +A + + + A + E+ EE + G IV+KRN GN L G
Sbjct: 123 ELPPAKAPAQVKPRAGNVKMRKTKAREPNKREMTLEEKNFVEGWIVRKRN-GNPELV--G 179
Query: 341 DEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDV 400
EIELDI+ +D +T +L RFV+ FKKA + +S++ +
Sbjct: 180 GEIELDIDEMDVETQWELDRFVNKFKKA-----------------------LNKSRRAAI 216
Query: 401 AAEEEVDIGEEIPVQNYPPVVIERDDASSGTSTSSTDSEDSSSSTSSGSGSSSSSDDDTA 460
E D+ + V + D +G++ + D+ D + + G+ S S ++
Sbjct: 217 VNGENADVID-------ASVANDSDMLVNGSTATMVDNGDVTMAIIQGATKDSVS--ESR 267
Query: 461 QSPFPGA 467
Q PF G+
Sbjct: 268 QCPFSGS 274
>gi|449439059|ref|XP_004137305.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449483310|ref|XP_004156552.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 538
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 78/115 (67%), Gaps = 4/115 (3%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
++ C +L +LMK K GW FN PVD L L DYH II KPMDLGT++ +L N YK P
Sbjct: 231 VLKSCSNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNWYKSP 290
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRG 294
+EFAEDVRLTF+NA+ YNPKG V+ MAE LS FE+ ++ + +Q +G+G
Sbjct: 291 REFAEDVRLTFSNAITYNPKGEDVHMMAEQLSNIFEEKWKTIEGKQN----VGKG 341
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+ EEK L L++LP ++L ++ I+KKRN G L + DEIELDI ++D++TL
Sbjct: 408 RDMTYEEKQKLSIDLQDLPSDKLNNVVKIIKKRNQG---LFQNDDEIELDIGSVDSETLW 464
Query: 357 QLVRFVDNFKKA 368
+L RFV N+KK+
Sbjct: 465 ELERFVANYKKS 476
>gi|224056555|ref|XP_002298908.1| global transcription factor group [Populus trichocarpa]
gi|222846166|gb|EEE83713.1| global transcription factor group [Populus trichocarpa]
Length = 411
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 74/100 (74%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
+K+ + CGE+L KLMK + GW FN PVD L+L DY+ IIK PMDLGTV+S+L N Y
Sbjct: 28 SKDLVIGCGELLGKLMKHQYGWVFNEPVDAKKLKLHDYYKIIKHPMDLGTVKSRLSKNWY 87
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
K P+EFAEDVRLTFNNA+ YN KG V+AMA+ L FE+
Sbjct: 88 KSPKEFAEDVRLTFNNAMKYNEKGQDVHAMADKLLKIFEE 127
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 285 QQRQGILGRGKARE-----MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCH 339
Q R +L + K E M+ EEK L L+ LP E+L ++ I++KRN G L
Sbjct: 234 QGRTSVLNKPKKNETVRGVMTYEEKQKLSIHLQSLPSEKLESVVQIIRKRNPG---LFQQ 290
Query: 340 GDEIELDIEALDNDTLSQLVRFVDNFKKA 368
DEIE+DI++ DN+TL +L +V N++K+
Sbjct: 291 EDEIEVDIDSFDNETLWELHGYVTNYQKS 319
>gi|225461616|ref|XP_002283002.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 597
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 76/128 (59%), Gaps = 2/128 (1%)
Query: 151 GGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLR 210
G K P N K K G + A + C +L KLMK K GW FN PVDV L
Sbjct: 228 GKDKLPPPESNKKPKSNGVGIDKYVA--QAFKNCSNLLAKLMKHKHGWVFNNPVDVKGLG 285
Query: 211 LRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETL 270
L DY+ IIK PMD GTV+S+L N YK P+EFAEDVRLT NA+ YNPKG V+ MAE L
Sbjct: 286 LHDYYSIIKHPMDFGTVKSRLSKNWYKSPREFAEDVRLTLQNAMTYNPKGQDVHCMAEEL 345
Query: 271 SAKFEQMF 278
FE+ +
Sbjct: 346 LKIFEEKW 353
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+ EEK L +L+ LP E+L ++ I+KKRNS ++S DEIE+DI+++D +TL
Sbjct: 432 RDMTYEEKQKLSSNLQSLPSEKLDHIVQIIKKRNS---AVSQQDDEIEVDIDSVDAETLW 488
Query: 357 QLVRFVDNFKKA 368
+L R+V N+KK+
Sbjct: 489 ELDRYVTNYKKS 500
>gi|330792873|ref|XP_003284511.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
gi|325085541|gb|EGC38946.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
Length = 1321
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 116/239 (48%), Gaps = 53/239 (22%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+RC ++L +LM+ Q F PVD +L + DY + IK+PMD GT+++ + VY
Sbjct: 647 VFKRCSDLLDELMEHPQAGPFLVPVDPYALGILDYFNFIKRPMDFGTIKNSIVGGVYHTI 706
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-------QQRQGI-- 290
EFAEDVRL F+NA YNP + V+ MA+TL FE+ F ++ ++ Q + +
Sbjct: 707 DEFAEDVRLVFSNAKAYNPPANLVHIMAKTLEDLFEEKFPQVIEEPDESDETQDKVNVSN 766
Query: 291 --------------------------------------LGRGKAREMSLEEKMALGRSLE 312
R K E+++EEK LG +
Sbjct: 767 VNKDSRRKPSSSSPSSSHSSSKRRSSTSSSRSSSSRSSSNRKKLPEITMEEKTKLGSEIT 826
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCH--GDEIELDIEALDNDTLSQLVRFVDNFKKAE 369
+LP E L K+L I+ N SL H +E+E+D+ D+DTL +L RFV+ FK E
Sbjct: 827 QLPVEYLPKILQIIHNTN----SLPDHDPNEEVEIDLNNFDDDTLRRLNRFVEQFKSGE 881
>gi|356515098|ref|XP_003526238.1| PREDICTED: uncharacterized protein LOC100780669 [Glycine max]
Length = 971
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 69/98 (70%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ C +L KLM+ K GW FN+PVDV +L L DY II PMDLGTV+++L N YK P+
Sbjct: 629 FKSCSSLLEKLMRHKHGWVFNSPVDVETLGLHDYFTIITHPMDLGTVKTRLNKNWYKSPK 688
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
EFAEDVRLTF NA+ YNP+G V+ MAE LS FE +
Sbjct: 689 EFAEDVRLTFRNAMTYNPQGQDVHIMAELLSKIFEDRW 726
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 53/72 (73%), Gaps = 3/72 (4%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+ EEK L +L+ LP E+L ++ I+KKRNS +L+ H DEIE+DI+++D +TL
Sbjct: 806 RDMTFEEKQKLSTNLQSLPSEKLDAIVQIIKKRNS---ALNQHDDEIEVDIDSVDAETLW 862
Query: 357 QLVRFVDNFKKA 368
+L RFV N+KK+
Sbjct: 863 ELDRFVTNYKKS 874
>gi|357474555|ref|XP_003607562.1| Bromodomain-containing factor [Medicago truncatula]
gi|355508617|gb|AES89759.1| Bromodomain-containing factor [Medicago truncatula]
Length = 980
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 69/98 (70%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ C +L KLMK + W FNTPVDV L L DY II PMDLGTV+++L N YK P+
Sbjct: 656 FKSCSSLLEKLMKHQYAWVFNTPVDVDGLGLHDYFTIITNPMDLGTVKTRLNKNWYKSPK 715
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
EFAEDVRLTF+NA+ YNPKG V+AMAE LS FE +
Sbjct: 716 EFAEDVRLTFHNAMTYNPKGQDVHAMAEQLSKIFEDRW 753
>gi|356545057|ref|XP_003540962.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 874
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 67/98 (68%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ C +L KLMK K GW FN PVDV +L L DY II PMDLGTV+S+L N YK P+
Sbjct: 532 FKSCSSLLEKLMKHKHGWVFNAPVDVEALGLHDYFTIITHPMDLGTVKSRLNKNWYKSPK 591
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
EFAEDVRLTF NA+ YNP G V+ MAE LS FE +
Sbjct: 592 EFAEDVRLTFRNAMTYNPPGQDVHIMAEQLSKIFEDRW 629
>gi|356542179|ref|XP_003539547.1| PREDICTED: uncharacterized protein LOC100781720 [Glycine max]
Length = 901
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 72/108 (66%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
++ C +L KLMK K GW FN PVDV L L DY II PMDLGTV+S+L N YK P+
Sbjct: 563 LKSCSALLEKLMKHKHGWVFNAPVDVEGLGLHDYFSIITHPMDLGTVKSRLNKNWYKSPK 622
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
EFAEDVRLTF+NA+ YNPKG V+ MAE L FE+ + + R+
Sbjct: 623 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLNIFEERWAIIESNYYRE 670
>gi|449444709|ref|XP_004140116.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449516325|ref|XP_004165197.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 667
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 73/112 (65%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ C +L KL+K K GW F+ PVDV L L DY+ IIK PMDLGTV+S+L N YK P+
Sbjct: 330 FKSCSSLLEKLIKHKYGWVFDAPVDVQGLGLHDYYTIIKHPMDLGTVKSRLNKNWYKSPK 389
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG 292
EFAEDVRLTF NA+ YNPKG VY MA+ L + FE + + R+ G
Sbjct: 390 EFAEDVRLTFRNAMTYNPKGQDVYVMADQLLSIFEDRWVIIEADYNREMRFG 441
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 12/125 (9%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+ EEK L +L+ LP E+L +L I+KKRNS ++ +EIE+DI+++D +TL
Sbjct: 509 RDMTYEEKQKLSSNLQNLPSEKLDAILQIIKKRNS---NIFQDDEEIEVDIDSVDAETLW 565
Query: 357 QLVRFVDNFKKA-EKDKTEKEPMCSQVA-----VAVAAPVVIERSKKGDVAAEEEVDIGE 410
+L RFV N+KK+ K+K + E A APVV+E KK +E +
Sbjct: 566 ELDRFVTNYKKSLSKNKRKAELALRARADDEHNSTQKAPVVMEVPKK---TKADENTVSS 622
Query: 411 EIPVQ 415
+PVQ
Sbjct: 623 SVPVQ 627
>gi|255568313|ref|XP_002525131.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223535590|gb|EEF37258.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 742
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 68/98 (69%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ C +L KLMK K GW F +PVDV L L DY IIK PMDLGTV+++L N YK P+
Sbjct: 400 FKNCSALLEKLMKHKYGWVFKSPVDVKGLGLHDYFTIIKHPMDLGTVKTRLNKNWYKSPE 459
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
EFAEDVRLTF+NA+ YNPKG V+ MAE L FE +
Sbjct: 460 EFAEDVRLTFHNAMRYNPKGQDVHVMAEILLKLFEDRW 497
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+ +EK L +L+ LP E+L ++ I+KKRNS SLS H DEIE+DI+++D +TL
Sbjct: 579 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNS---SLSQHDDEIEVDIDSVDAETLW 635
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQ 381
+L RFV N+KK+ K + SQ
Sbjct: 636 ELDRFVTNYKKSLSKNKRKAELASQ 660
>gi|297843426|ref|XP_002889594.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335436|gb|EFH65853.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+ C +L +LMK K GW FN PVDV L L DY+ II+ PMDLGT++S L N+YK P
Sbjct: 421 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSP 480
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
+EFAEDVRLTF+NA+ YNP+G V+ MA TL FE+ + + R+
Sbjct: 481 REFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNRE 529
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+ EEK L L+ LP ++L ++ IV KRN+ ++ +EIE+DI+++D +TL
Sbjct: 605 RDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNT---AVKLRDEEIEVDIDSVDPETLW 661
Query: 357 QLVRFVDNF 365
+L RFV N+
Sbjct: 662 ELDRFVTNY 670
>gi|15221424|ref|NP_172113.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|30679613|ref|NP_849601.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|334182337|ref|NP_001184922.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|75174943|sp|Q9LNC4.1|GTE4_ARATH RecName: Full=Transcription factor GTE4; AltName:
Full=Bromodomain-containing protein GTE4; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E4
gi|8844128|gb|AAF80220.1|AC025290_9 Contains similarity to a Ring3 protein from Homo sapiens gi|133157
and contains a bromodomain PF|00439. EST gb|F14211 comes
from this gene [Arabidopsis thaliana]
gi|332189843|gb|AEE27964.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189844|gb|AEE27965.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189845|gb|AEE27966.1| global transcription factor group E4 [Arabidopsis thaliana]
Length = 766
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+ C +L +LMK K GW FN PVDV L L DY+ II+ PMDLGT++S L N+YK P
Sbjct: 421 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSP 480
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
+EFAEDVRLTF+NA+ YNP+G V+ MA TL FE+ + + R+
Sbjct: 481 REFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNRE 529
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+ EEK L L+ LP ++L ++ IV KRN+ ++ +EIE+DI+++D +TL
Sbjct: 605 RDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNT---AVKLRDEEIEVDIDSVDPETLW 661
Query: 357 QLVRFVDNF 365
+L RFV N+
Sbjct: 662 ELDRFVTNY 670
>gi|255567054|ref|XP_002524509.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223536183|gb|EEF37836.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 553
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 117/240 (48%), Gaps = 50/240 (20%)
Query: 89 PQSLPESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNL-----------------GSRI 131
P + D V +L ++ +++L+++LVS+L++VR+L G +
Sbjct: 71 PGYVKLDDKVRISLNCGSKSVIRELKRKLVSELDQVRSLKKRLEAKETQFNGSNRTGGTL 130
Query: 132 ANSDFQATHAYPTT-----------------------KSQNRGGSKRANPFGNPKAKR-- 166
A + + ++ PT K ++ K+ G+ K+
Sbjct: 131 ARVNSEVSYVGPTNSRPLQKLADNTSNNNHYENLDKEKKTSKVNHKKEKVLGSENIKKKL 190
Query: 167 --------AAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDII 218
G + ++C ++L KLMK + GW FN PVDV L+L DY II
Sbjct: 191 KTSNEPKKGGEGNIMGRCNREVFKKCEDLLEKLMKHQYGWVFNKPVDVKKLKLHDYFKII 250
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
K PMDLGTV+S+L+ N YK P+EFAEDV+LTFNNA+ YN KG + MA+ L FE+ +
Sbjct: 251 KHPMDLGTVKSRLKKNWYKSPKEFAEDVKLTFNNAMKYNDKGQDAHIMADVLLKLFEEHW 310
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REM+ EEK L L ++P ++L ++ I++KRN G L DEIE+DI++ D++TL
Sbjct: 406 REMTFEEKQRLSADLLDMPSDKLDSVVQIIRKRNPG---LCQQDDEIEVDIDSFDSETLW 462
Query: 357 QLVRFVDNFKKA-EKDKTEKEP 377
+L R V+N KK KD EP
Sbjct: 463 ELDRLVNNHKKGLTKDSRIAEP 484
>gi|295828212|gb|ADG37775.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 72/109 (66%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+ C +L +LMK K GW FN PVDV L L DY II+ PMDLGT++S L N+YK P
Sbjct: 102 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNIYKSP 161
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
+EFA+DVRLTF+NA+ YNP G V+ MAETL FE+ + + R+
Sbjct: 162 REFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|359483574|ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [Vitis vinifera]
Length = 588
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 129/260 (49%), Gaps = 42/260 (16%)
Query: 151 GGSKRANP--FGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVS 208
G KR P PKAKR ++ +C IL KLM GW FN PVD V+
Sbjct: 46 GTKKRGTPGITDVPKAKRQKMD-------RSTTLQCTSILKKLMTHPAGWVFNQPVDPVA 98
Query: 209 LRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAE 268
L + DY II KPMDLGT++SKLE N+Y +EFA DVRLTF NA++YNP + V+ MA+
Sbjct: 99 LNIPDYFSIISKPMDLGTIKSKLEKNMYLATEEFAADVRLTFANAMLYNPPSNNVHQMAK 158
Query: 269 TLSAKFEQMFQKLSKQQQRQG------IL--GRGK----------------AREMSLEEK 304
L+ F ++ + IL GRGK A MS E+K
Sbjct: 159 KLNDLFNTRWKTVDTNWSESSKVDPGKILSGGRGKTINSSRQKCSTTPSLHANSMSFEDK 218
Query: 305 MALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDE-IELDIEALDNDTLSQLVRFVD 363
L + L E+ + ++ LG +R+ ++C E +E++I+ D +TL +L R +
Sbjct: 219 QKLRKELMEVSRGKMPPYLGGFLRRH----GMTCQNIETMEVNIDKFDEETLLELRRVMK 274
Query: 364 NFKKAEKDKTEKEPMCSQVA 383
A +K E C++ A
Sbjct: 275 ISCDARTEKVE----CTKTA 290
>gi|295828222|gb|ADG37780.1| AT1G06230-like protein [Neslia paniculata]
Length = 210
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 72/109 (66%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+ C +L +LMK K GW FN PVDV L L DY II+ PMDLGT++S L N+YK P
Sbjct: 102 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSP 161
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
+EFA+DVRLTF+NA+ YNP G V+ MAETL FE+ + + R+
Sbjct: 162 REFADDVRLTFHNAMTYNPAGQDVHVMAETLLQIFEERWAVIEADYNRE 210
>gi|297740594|emb|CBI30776.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 125/247 (50%), Gaps = 40/247 (16%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKP 221
PKAKR ++ +C IL KLM GW FN PVD V+L + DY II KP
Sbjct: 44 PKAKRQKMD-------RSTTLQCTSILKKLMTHPAGWVFNQPVDPVALNIPDYFSIISKP 96
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MDLGT++SKLE N+Y +EFA DVRLTF NA++YNP + V+ MA+ L+ F ++ +
Sbjct: 97 MDLGTIKSKLEKNMYLATEEFAADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRWKTV 156
Query: 282 SKQQQRQG------IL--GRGK----------------AREMSLEEKMALGRSLEELPQE 317
IL GRGK A MS E+K L + L E+ +
Sbjct: 157 DTNWSESSKVDPGKILSGGRGKTINSSRQKCSTTPSLHANSMSFEDKQKLRKELMEVSRG 216
Query: 318 ELGKLLGIVKKRNSGNGSLSCHGDE-IELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKE 376
++ LG +R+ ++C E +E++I+ D +TL +L R + A +K E
Sbjct: 217 KMPPYLGGFLRRH----GMTCQNIETMEVNIDKFDEETLLELRRVMKISCDARTEKVE-- 270
Query: 377 PMCSQVA 383
C++ A
Sbjct: 271 --CTKTA 275
>gi|413936534|gb|AFW71085.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 667
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 73/103 (70%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
+A ++ +L++LMK K GW FN PVD V+L L DY IIK PMDLGT+R +L Y+
Sbjct: 324 HAFKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQYRN 383
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+EFAEDVRLTF+NA+ YNPKG V+ MAE LS FE + ++
Sbjct: 384 PKEFAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEI 426
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+++EK L +L+ LP E+L ++ ++K +N S+ H DEIE++I+++D +TL
Sbjct: 495 RDMTIDEKRKLSENLQNLPPEKLDAVVQVIKNKNL---SVMQHDDEIEVEIDSMDAETLW 551
Query: 357 QLVRFVDNFKK---AEKDKTEKEPMCSQVA 383
+L RFV N+KK +K K E+ + Q A
Sbjct: 552 ELDRFVANYKKNLSKQKRKAERAMLARQDA 581
>gi|413936535|gb|AFW71086.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 671
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 73/103 (70%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
+A ++ +L++LMK K GW FN PVD V+L L DY IIK PMDLGT+R +L Y+
Sbjct: 324 HAFKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQYRN 383
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+EFAEDVRLTF+NA+ YNPKG V+ MAE LS FE + ++
Sbjct: 384 PKEFAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEI 426
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+++EK L +L+ LP E+L ++ ++K +N S+ H DEIE++I+++D +TL
Sbjct: 495 RDMTIDEKRKLSENLQNLPPEKLDAVVQVIKNKNL---SVMQHDDEIEVEIDSMDAETLW 551
Query: 357 QLVRFVDNFKK---AEKDKTEKEPMCSQVA 383
+L RFV N+KK +K K E+ + Q A
Sbjct: 552 ELDRFVANYKKNLSKQKRKAERAMLARQDA 581
>gi|295828216|gb|ADG37777.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 72/109 (66%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+ C +L +LMK K GW FN PVDV L L DY II+ PMDLGT++S L N+YK P
Sbjct: 102 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSP 161
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
+EFA+DVRLTF+NA+ YNP G V+ MAETL FE+ + + R+
Sbjct: 162 REFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|295828210|gb|ADG37774.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828220|gb|ADG37779.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 72/109 (66%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+ C +L +LMK K GW FN PVDV L L DY II+ PMDLGT++S L N+YK P
Sbjct: 102 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSP 161
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
+EFA+DVRLTF+NA+ YNP G V+ MAETL FE+ + + R+
Sbjct: 162 REFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|168062324|ref|XP_001783131.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665381|gb|EDQ52068.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 121/219 (55%), Gaps = 40/219 (18%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL---ENNVYK 237
MR+ IL ++ K W F PVDV L L DY+++I+KPMDLGT+++K+ + + Y+
Sbjct: 1 MRQVLSILRQISSHKWAWPFMKPVDVKGLGLHDYYEVIEKPMDLGTIKNKMDAKDASGYQ 60
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ------GIL 291
QE +DVRL F+NA+ YNP+G VY M++TLS KFE+ ++ L + + + GI+
Sbjct: 61 HVQEVYQDVRLVFSNAMKYNPEGSDVYVMSKTLSEKFEEKWKTLVEPKLHEEVDIFSGIV 120
Query: 292 GRG----------------------------KAREMSLEEKMALGRSLEELPQEELGKLL 323
+R MS+EE+ LG+SL LP + L ++
Sbjct: 121 DHDLHFLMASTFFLEELDKQLEDLKQQATPKLSRAMSVEERRHLGQSLGRLPPDNLSHVI 180
Query: 324 GIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
I+ ++N S + + DE+E+DI+A D TL +L R+V
Sbjct: 181 QIIAQKNP---SFNMNSDEVEVDIDAQDPATLWRLQRYV 216
>gi|295828214|gb|ADG37776.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828218|gb|ADG37778.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 71/109 (65%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+ C +L +LMK K GW FN PVDV L L DY II+ PMDLGT++S L N YK P
Sbjct: 102 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNXYKSP 161
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
+EFA+DVRLTF+NA+ YNP G V+ MAETL FE+ + + R+
Sbjct: 162 REFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|345288391|gb|AEN80687.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288393|gb|AEN80688.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288395|gb|AEN80689.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288397|gb|AEN80690.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288399|gb|AEN80691.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288401|gb|AEN80692.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288403|gb|AEN80693.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288405|gb|AEN80694.1| AT1G06230-like protein, partial [Capsella rubella]
Length = 197
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 68/97 (70%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+ C +L +LMK K GW FN PVDV L L DY II+ PMDLGT++S L N+YK P
Sbjct: 98 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSP 157
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
+EFA+DVRLTF+NA+ YNP G V+ MAETL FE+
Sbjct: 158 REFADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEE 194
>gi|413925979|gb|AFW65911.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
gi|413925980|gb|AFW65912.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 665
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 72/103 (69%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
+A ++ +L++LMK K GW FN PVD V+L L DY IIK PMDLGT+R +L Y+
Sbjct: 318 HAFKKSSSLLSRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQYRN 377
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+EFAEDVRLTF+NA+ YNPKG V+ MAE L FE + ++
Sbjct: 378 PKEFAEDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEI 420
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+++EK L +L+ LP +L ++ ++K +N S+ H DEIE++I+++D +TL
Sbjct: 489 RDMTIDEKRKLSENLQNLPPVKLDAVVQVIKNKNL---SVKQHDDEIEVEIDSMDAETLW 545
Query: 357 QLVRFVDNFKK---AEKDKTEKEPMCSQVA 383
+L RFV N+KK +K K E+ + Q A
Sbjct: 546 ELDRFVSNYKKNLSKQKRKAERAMLARQDA 575
>gi|413925981|gb|AFW65913.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 670
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 72/103 (69%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
+A ++ +L++LMK K GW FN PVD V+L L DY IIK PMDLGT+R +L Y+
Sbjct: 318 HAFKKSSSLLSRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQYRN 377
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+EFAEDVRLTF+NA+ YNPKG V+ MAE L FE + ++
Sbjct: 378 PKEFAEDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEI 420
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+++EK L +L+ LP +L ++ ++K +N S+ H DEIE++I+++D +TL
Sbjct: 489 RDMTIDEKRKLSENLQNLPPVKLDAVVQVIKNKNL---SVKQHDDEIEVEIDSMDAETLW 545
Query: 357 QLVRFVDNFKK---AEKDKTEKEPMCSQVA 383
+L RFV N+KK +K K E+ + Q A
Sbjct: 546 ELDRFVSNYKKNLSKQKRKAERAMLARQDA 575
>gi|147826573|emb|CAN72911.1| hypothetical protein VITISV_007433 [Vitis vinifera]
Length = 588
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 127/260 (48%), Gaps = 42/260 (16%)
Query: 151 GGSKRANP--FGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVS 208
G KR P PKAKR ++ +C IL LM GW FN PVD V+
Sbjct: 46 GTKKRGXPGITDVPKAKRQKMD-------RSTTLQCTSILKXLMTHPAGWVFNQPVDPVA 98
Query: 209 LRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAE 268
L + DY II KPMDLGT++SKLE N Y +EFA DVRLTF NA++YNP + V+ MA+
Sbjct: 99 LNIPDYFSIISKPMDLGTIKSKLEKNXYLATEEFAADVRLTFANAMLYNPPSNNVHQMAK 158
Query: 269 TLSAKFEQMFQKLSKQQQRQG------IL--GRGK----------------AREMSLEEK 304
L+ F ++ + IL GRGK A MS E+K
Sbjct: 159 KLNDLFNTRWKTVDTNWSESSKVDPGKILSGGRGKTINSSRQKCSTTPSLHANSMSFEDK 218
Query: 305 MALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDE-IELDIEALDNDTLSQLVRFVD 363
L + L E+ + ++ LG +R+ ++C E +E++I+ D +TL +L R +
Sbjct: 219 QKLRKELMEVSRGKMPPYLGGFLRRH----GMTCQNIETMEVNIDKFDEETLLELRRVMK 274
Query: 364 NFKKAEKDKTEKEPMCSQVA 383
A +K E C++ A
Sbjct: 275 ISCDARTEKVE----CTKTA 290
>gi|326502374|dbj|BAJ95250.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 8/190 (4%)
Query: 109 ELKDLRKRLVSDLERVRNLGSR--------IANSDFQATHAYPTTKSQNRGGSKRANPFG 160
E + LRKR ++L+ VR L R ++ + ++ A P K RG G
Sbjct: 78 ERRYLRKRFRAELDSVRYLLKRPEFLAIMPVSRAPGFSSSAAPRAKKVQRGSHVLRGAKG 137
Query: 161 NPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+ T ++ +++C IL KLM K FN PVDV L + DY++IIK
Sbjct: 138 RFLPTKPRPETSTVLPEATILKQCEAILKKLMTQKFSHIFNVPVDVEKLNIPDYNEIIKH 197
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
PMDLGT++ KL++ Y P +FA DVRLTFNNA+ YNP+GH V+ MA L+ FE ++
Sbjct: 198 PMDLGTIKKKLDSGSYTSPSDFAADVRLTFNNAITYNPRGHAVHDMAIQLNKMFESRWKT 257
Query: 281 LSKQQQRQGI 290
+ K+ I
Sbjct: 258 VEKKLASAAI 267
>gi|168002796|ref|XP_001754099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694653|gb|EDQ81000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 121/228 (53%), Gaps = 55/228 (24%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL---ENNVYKCPQEFA 243
I ++ + K W F PVDV L L DY+D+I+KPMDLGT+++K+ + + Y+ QE
Sbjct: 231 IWRQISQHKWAWPFLKPVDVEGLGLHDYNDVIEKPMDLGTIKNKMDAKDTSGYQHVQEVC 290
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL---------SKQQQRQ------ 288
+D+RL F+NA+ YNP+G V+ M++TLS KFE+ ++ L SK QQ
Sbjct: 291 DDMRLVFSNAMTYNPEGSDVHVMSKTLSDKFEEKWKALIEPKLHFEESKTQQEDNEVQLK 350
Query: 289 --GI----------------------------LGRGKA----REMSLEEKMALGRSLEEL 314
G+ L R A R MS+EEK LG++L +L
Sbjct: 351 EAGMQVVEEIDTKKLTEQYLLQLEELDKQLEDLKRQAAPTCSRAMSIEEKRHLGQNLGKL 410
Query: 315 PQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
P E L ++ I+ +RN S + + DE+E+DI+A D TL +L R+V
Sbjct: 411 PPENLSHVIQIIAQRNP---SFNINSDEVEVDIDAQDPATLWRLQRYV 455
>gi|1588281|prf||2208296A RING3 protein
Length = 509
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 122/262 (46%), Gaps = 53/262 (20%)
Query: 167 AAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMD 223
A S S ++ C IL +L+ K W F PVD +L L DYHDIIK PMD
Sbjct: 171 AILAPGSPASPPGSLEPCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMD 230
Query: 224 LGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
L TV+ K+EN Y+ QEFA DVRL F+N YNP H V AMA L FE + K+
Sbjct: 231 LSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD 290
Query: 284 Q-------QQRQGILGRG-------------------------------------KAREM 299
+ ++ L +G ++R M
Sbjct: 291 EPEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAKTAPPALPTGYDSEEEEESRPM 350
Query: 300 SLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQL 358
S +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +L
Sbjct: 351 SYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPSTLREL 407
Query: 359 VRFVDNF--KKAEKDKTEKEPM 378
R+V + KK K T K+P+
Sbjct: 408 ERYVLSCLRKKPRKPYTIKKPV 429
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
>gi|167999165|ref|XP_001752288.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696683|gb|EDQ83021.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 53/223 (23%)
Query: 190 KLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENN---VYKCPQEFAEDV 246
++ + K W F PVDV L L DY+D+I+KPMDLGT+++KL+ Y+ QE +DV
Sbjct: 1 QISQHKWAWPFMKPVDVKGLGLHDYYDVIEKPMDLGTIKNKLDVKDGLGYQHVQEVCDDV 60
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL---------------SKQQQRQG-- 289
RL F+NA+ YNP+G VY M++TLS KFE+ ++ L S+ Q +G
Sbjct: 61 RLVFSNAMTYNPEGSDVYVMSKTLSDKFEEKWKTLIEPKLQEELKRSHDDSEVQANEGGV 120
Query: 290 ---------------------------ILGRGK---AREMSLEEKMALGRSLEELPQEEL 319
L + + R MS+EEK LG+SL LP + L
Sbjct: 121 PVVEEIDTEKVIEQYALQVSLDCSQDCALSKCRKIMTRAMSVEEKRHLGQSLGRLPPDNL 180
Query: 320 GKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
++ I+ ++N S + + DE+E+DI+A D TL +L R+V
Sbjct: 181 SHVIQIIAQKNP---SFNINSDEVEVDIDAQDPATLWRLQRYV 220
>gi|357144539|ref|XP_003573328.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 777
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 112/199 (56%), Gaps = 10/199 (5%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRI-----ANSDFQATHAYPT---TKSQNR 150
F L + + KDL +L +LE+VR L +R+ S AT + P ++
Sbjct: 65 VFELSRMSVSDRKDLEMKLRQELEQVRALQNRLFSRGALTSMNGATSSAPGGDFNGNKKD 124
Query: 151 GGSKRANPFGNPKAKRAAAGTXSLTSTKNA--MRRCGEILTKLMKDKQGWAFNTPVDVVS 208
G KR+ + + ++ +++S A ++C ++L LM+ + G F+ PVD V
Sbjct: 125 GKLKRSYSVQSGRGLMSSMAQPAVSSINYAPLFKKCQDLLRNLMRHRYGQTFSIPVDPVK 184
Query: 209 LRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAE 268
L + DY DI+K PMDLGT++ KL + Y P EFA DVRLTF+NA++YNP + V+ MA+
Sbjct: 185 LNIPDYFDIVKHPMDLGTIQKKLNSGSYPTPWEFAADVRLTFSNAILYNPHNNVVHQMAK 244
Query: 269 TLSAKFEQMFQKLSKQQQR 287
T+S+ FE ++ + K+ R
Sbjct: 245 TMSSHFEPRWKPIEKKLPR 263
>gi|294462729|gb|ADE76909.1| unknown [Picea sitchensis]
Length = 377
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 122/259 (47%), Gaps = 59/259 (22%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV---YK 237
MR+ IL ++ + + W F TPVDV L L DYHD+IKKPMD GT+R K++ YK
Sbjct: 110 MRQFSTILRQITQHRWAWPFMTPVDVKGLGLHDYHDVIKKPMDFGTIRRKMDAKDATGYK 169
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ------------------ 279
+ EDVRL F NA+ YN V+ MA+TLS KFE+ ++
Sbjct: 170 NVCDICEDVRLVFKNAVTYNDDQSDVHVMAKTLSQKFEEKWKTLWPKVNEEEARRKKEEA 229
Query: 280 ----------KLSKQQQRQGILGRG----------------KAREMSLEEKMALGRSLEE 313
+LS + + + G K R MS+EEK LG SL +
Sbjct: 230 DANSREMVDSRLSGETDLEKLGGELDELNEHLEKLRQELAPKCRMMSVEEKRQLGESLGK 289
Query: 314 LPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVD---------N 364
L E+L K L I+ ++N S DE+ELDI+A D TL +L FV +
Sbjct: 290 LSPEDLTKALQIIAQKNP---SFIPTEDEVELDIDAQDASTLWRLQYFVKAVLSVQAKTS 346
Query: 365 FKKAEKDKTEKEPMCSQVA 383
KA+ K+ +C +A
Sbjct: 347 IAKAQAKTKRKKEICDAIA 365
>gi|42407711|dbj|BAD08859.1| putative bromodomain-containing protein [Oryza sativa Japonica
Group]
gi|125602058|gb|EAZ41383.1| hypothetical protein OsJ_25901 [Oryza sativa Japonica Group]
Length = 791
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSR-------IANSDFQATHAYPTTKSQNRG 151
F L + + KDL RL +LE+V+ L SR ++ + A+ + +N
Sbjct: 72 VFMLPRMSPSDKKDLEMRLRKELEQVKALQSRLFLRPAAVSMNGGAASASGDVVAKRNDA 131
Query: 152 GSKRANPFGNPKAKRAAAGTXSLTSTK--NAMRRCGEILTKLMKDKQGWAFNTPVDVVSL 209
KR+N + + +A T + S A ++CG +L L K + F PVDVV L
Sbjct: 132 KLKRSNSVQSGRGVPPSAATPVVRSANYAEAFKQCGNLLKNLFKHQWAGPFLAPVDVVQL 191
Query: 210 RLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAET 269
+ DY DIIKKPMDLGT+ KL +Y P +FA DVRLTF+NA+ YNP G+ V M +T
Sbjct: 192 NIPDYFDIIKKPMDLGTIEKKLNAGMYSTPWDFAADVRLTFDNAVTYNPVGNDVNLMGKT 251
Query: 270 LSAKFEQMFQKLSKQ 284
L FE ++ + K+
Sbjct: 252 LKCIFETRWKFIEKK 266
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 341 DEIELDIEALDNDTLSQLVRFVDNFKKAE------KDKTEKEPMCSQVAVAVAAPVVIER 394
DE+ELD+ L + TL +L + +D++ + KD+ + S+ ++ ++
Sbjct: 426 DELELDMNVLSDSTLFELQKLLDDYDRVNQSGNPTKDEHREVEFESEYGLSNSS----MH 481
Query: 395 SKKGDVAAEEEVDIG-EEIPVQNYPPVVIERDDA 427
++G+ EE+VDIG ++P YPP V E + A
Sbjct: 482 HEEGNELVEEDVDIGGNDLPPLTYPPAVFESETA 515
>gi|125560007|gb|EAZ05455.1| hypothetical protein OsI_27669 [Oryza sativa Indica Group]
Length = 791
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSR-------IANSDFQATHAYPTTKSQNRG 151
F L + + KDL RL +LE+V+ L SR ++ + A+ + +N
Sbjct: 72 VFMLPRMSPSDKKDLEMRLRKELEQVKALQSRLFSRPAAVSMNGGVASASGDVVAKRNDA 131
Query: 152 GSKRANPFGNPKAKRAAAGTXSLTSTK--NAMRRCGEILTKLMKDKQGWAFNTPVDVVSL 209
KR+N + + +A T + S A ++CG +L L K + F PVDVV L
Sbjct: 132 KLKRSNSVQSGRGVPPSAATPVVRSANYAEAFKQCGNLLKNLFKHQWAGPFLAPVDVVQL 191
Query: 210 RLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAET 269
+ DY DIIKKPMDLGT+ KL +Y P +FA DVRLTF+NA+ YNP G+ V M +T
Sbjct: 192 NIPDYFDIIKKPMDLGTIEKKLNAGMYSTPWDFAADVRLTFDNAVTYNPVGNDVNLMGKT 251
Query: 270 LSAKFEQMFQKLSKQ 284
L FE ++ + K+
Sbjct: 252 LKCIFETRWKFIEKK 266
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 341 DEIELDIEALDNDTLSQLVRFVDNFKKAE------KDKTEKEPMCSQVAVAVAAPVVIER 394
DE+ELD+ L + TL +L + +D++ + KD+ + S+ ++ ++
Sbjct: 426 DELELDMNVLSDSTLFELQKLLDDYDRVNQSGNPTKDEHREVEFESEYGLSNSS----MH 481
Query: 395 SKKGDVAAEEEVDIG-EEIPVQNYPPVVIERDDA 427
++G+ EE+VDIG ++P YPP V E + A
Sbjct: 482 HEEGNELVEEDVDIGGNDLPPLTYPPAVFESETA 515
>gi|449433591|ref|XP_004134581.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
gi|449523269|ref|XP_004168646.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
Length = 569
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 72/101 (71%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+ ++C IL LM + GW FN PVD V+L++ DY II PMDLGTV+SKLE N+Y+
Sbjct: 105 RGTTQQCSSILKTLMTHRFGWVFNQPVDPVALKIPDYFSIITDPMDLGTVKSKLERNLYQ 164
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
+EFA D+RLTF+NA++YNP G++V+ MA+ L FE+ +
Sbjct: 165 ASEEFAADIRLTFSNAMLYNPSGNHVHKMAKELLENFEKKW 205
>gi|119624070|gb|EAX03665.1| bromodomain containing 2, isoform CRA_c [Homo sapiens]
Length = 552
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 135/284 (47%), Gaps = 55/284 (19%)
Query: 146 KSQNRGGSKRANPFGNPKAKR-----------------AAAGTXSLTSTKNAMRRCGEIL 188
K+ ++ G+K A P P AK+ A G+ + K ++ C IL
Sbjct: 193 KNSHKKGAKLAAPPAQPLAKKKGVKRKADTTTPTPTAILAPGSPASPPGKQ-LKHCNGIL 251
Query: 189 TKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAED 245
+L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+ QEFA D
Sbjct: 252 KELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAAD 311
Query: 246 VRLTFNNALVYNPKGHYVYAMAETLSAK-FEQMFQKLSK--------------------Q 284
VRL F+N YNP H V AMA L + + LS+
Sbjct: 312 VRLMFSNCYKYNPPDHDVVAMARKLQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKA 371
Query: 285 QQRQGILGRG-------KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL- 336
++ L G ++R MS +EK L + +LP E+LG+++ I++ R SL
Sbjct: 372 EKPPPALPTGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLR 428
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFVDNF--KKAEKDKTEKEPM 378
+ +EIE+D E L TL +L R+V + KK K T K+P+
Sbjct: 429 DSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPV 472
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
>gi|218199690|gb|EEC82117.1| hypothetical protein OsI_26141 [Oryza sativa Indica Group]
Length = 484
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 76/110 (69%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
R+CG IL KLM K GW FNTPVD V + DY D+I+ PMDLGTV+ KL + Y P E
Sbjct: 63 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 122
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
FA DVRLTF+NA+ YNP G+ V+A+A+ L+ F+ ++ L ++ + + ++
Sbjct: 123 FAADVRLTFSNAMKYNPPGNDVHAIADQLNKIFDSEWKLLERKWKDRNLV 172
>gi|115472285|ref|NP_001059741.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|33146482|dbj|BAC79591.1| putative RING3 protein [Oryza sativa Japonica Group]
gi|113611277|dbj|BAF21655.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|215717115|dbj|BAG95478.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 484
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 75/110 (68%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
R+CG IL KLM K GW FNTPVD V + DY D+I+ PMDLGTV+ KL + Y P E
Sbjct: 63 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 122
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
FA DVRLTF+NA+ YNP G+ V+ +A+ L+ F+ ++ L ++ + + ++
Sbjct: 123 FAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEWKLLERKWKDRNLV 172
>gi|222637108|gb|EEE67240.1| hypothetical protein OsJ_24385 [Oryza sativa Japonica Group]
Length = 536
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 75/110 (68%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
R+CG IL KLM K GW FNTPVD V + DY D+I+ PMDLGTV+ KL + Y P E
Sbjct: 115 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 174
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
FA DVRLTF+NA+ YNP G+ V+ +A+ L+ F+ ++ L ++ + + ++
Sbjct: 175 FAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEWKLLERKWKDRNLV 224
>gi|350416103|ref|XP_003490841.1| PREDICTED: homeotic protein female sterile-like isoform 1 [Bombus
impatiens]
Length = 1486
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV++K++N Y
Sbjct: 411 ALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREY 470
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K QEFA DVRL F N YNP H V AMA L FE + K+
Sbjct: 471 KTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K + W F PVD L L DYH IIK+PMDLGT++ +LEN Y +E +D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+ L F ++ K++
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEE 176
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 731 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 787
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 788 LRELESYV 795
>gi|350416106|ref|XP_003490842.1| PREDICTED: homeotic protein female sterile-like isoform 2 [Bombus
impatiens]
Length = 1452
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV++K++N Y
Sbjct: 377 ALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREY 436
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K QEFA DVRL F N YNP H V AMA L FE + K+
Sbjct: 437 KTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 481
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K + W F PVD L L DYH IIK+PMDLGT++ +LEN Y +E +D
Sbjct: 70 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+ L F ++ K++
Sbjct: 130 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEE 168
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 697 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 753
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 754 LRELESYV 761
>gi|383859381|ref|XP_003705173.1| PREDICTED: homeotic protein female sterile-like [Megachile
rotundata]
Length = 1489
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV++K++N Y
Sbjct: 411 ALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREY 470
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K QEFA DVRL F N YNP H V AMA L FE + K+
Sbjct: 471 KTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K + W F PVD L L DYH IIK+PMDLGT++ +LEN Y +E +D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+ L F ++ K++
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEE 176
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 731 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 787
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 788 LRELESYV 795
>gi|328788637|ref|XP_624214.3| PREDICTED: hypothetical protein LOC551826 [Apis mellifera]
Length = 1492
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV++K++N Y
Sbjct: 411 ALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREY 470
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K QEFA DVRL F N YNP H V AMA L FE + K+
Sbjct: 471 KTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K + W F PVD L L DYH IIK+PMDLGT++ +LEN Y +E +D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+ L F ++ K++
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEE 176
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 730 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 786
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 787 LRELESYV 794
>gi|432888948|ref|XP_004075102.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 460
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 14/205 (6%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C +IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y+
Sbjct: 230 LKYCSDILKEMLSKKHSMYAWPFYKPVDAEALGLHDYHDIIKYPMDLSTVKKKMDAGDYQ 289
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
++F+ DVRL F+N YNP H V MA L FEQ F K+ ++Q Q + +
Sbjct: 290 DAEQFSADVRLIFSNCYKYNPPQHSVVGMARKLQGVFEQKFAKMP-EEQLQTVHQQLSNL 348
Query: 298 EMSLEEKMALGRSLEELPQ---EELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + + E P+ ++LG+++ I+K + S + DEIE+D E L T
Sbjct: 349 TQDPFNKPKMSKEQEREPETQHKKLGRVVHILKTQEPSMSS--SNPDEIEIDFEVLKPST 406
Query: 355 LSQLVRFV-----DNFKKAEKDKTE 374
L +L R+V FKK +K ++
Sbjct: 407 LRELERYVRSCLHKRFKKYQKQSSQ 431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + W F PVD V+L L DYH II PMD+GT++ +LENN Y E ED
Sbjct: 85 VIKSLWRHPFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRLENNYYWSASECMEDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
F N +YN + MA L F
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMALPLEKIF 172
>gi|340729450|ref|XP_003403016.1| PREDICTED: homeotic protein female sterile-like, partial [Bombus
terrestris]
Length = 497
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV++K++N Y
Sbjct: 15 ALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREY 74
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K QEFA DVRL F N YNP H V AMA L FE + K+
Sbjct: 75 KTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 119
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 335 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 391
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 392 LRELESYV 399
>gi|189241564|ref|XP_967957.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 1321
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N Y
Sbjct: 363 ALKSCNEILKELFSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMDNREY 422
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+ QEFA DVRL F N YNP H V AMA L FE F K+
Sbjct: 423 RSAQEFAADVRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKI 467
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K + W F PVD L L DYH II++PMDLGT++ +L+NN Y +E +D
Sbjct: 46 VLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRLDNNYYWSGKECIQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRG 294
F N VYN G V MA+TL F K++ + + ++ +G
Sbjct: 106 NTMFTNCYVYNKPGEDVVVMAQTLEKVF---LTKVADMPKEEVVVAKG 150
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 676 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 732
Query: 355 LSQLVRFVDNFKKAEKDKTEKEPMCS 380
L +L +V + + K ++P C+
Sbjct: 733 LRELESYVASCLR----KKPRKPYCN 754
>gi|218188757|gb|EEC71184.1| hypothetical protein OsI_03067 [Oryza sativa Indica Group]
Length = 264
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 95/184 (51%), Gaps = 13/184 (7%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
+A+ RCG++L KL++ + GW F PVD +LRL DY+ I PMDLGTVR +LE Y
Sbjct: 51 DALLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRCYAD 110
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKARE 298
P FA DVRLTFNNA+ YN G VY A LS FE + + R
Sbjct: 111 PWAFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPSVLAAPPRPP--------- 161
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQL 358
E K L L LP + I+KKR +G L +E+D++ D+ TL +L
Sbjct: 162 -DAERKRRLSGLLPRLPVGAQVTVAEIMKKR---DGCLREVNGMMEVDLDRADSATLDEL 217
Query: 359 VRFV 362
R V
Sbjct: 218 DRMV 221
>gi|30686240|ref|NP_181036.2| Transcription factor GTE6 [Arabidopsis thaliana]
gi|75148956|sp|Q84XV2.1|GTE1_ARATH RecName: Full=Transcription factor GTE1; AltName:
Full=Bromodomain-containing protein GTE1; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E1;
AltName: Full=Protein IMBIBITION-INDUCIBLE 1
gi|27803868|gb|AAO22056.1| IMB1 [Arabidopsis thaliana]
gi|110741364|dbj|BAF02232.1| RING3 protein-like [Arabidopsis thaliana]
gi|111074406|gb|ABH04576.1| At2g34900 [Arabidopsis thaliana]
gi|330253943|gb|AEC09037.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 151/348 (43%), Gaps = 68/348 (19%)
Query: 78 VHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQ 137
VH K+ P + ++ FN + EL++ + +RV L ++ +
Sbjct: 3 VHVKEEPVLVPNCDVENTELAVFNGNGES--ELENFGTCVDEITDRVNQLEQKVV----E 56
Query: 138 ATHAYPT--------TKSQNRGGSKRA-----NPFGNPKAKRAAAGTXSLTSTKNAMRRC 184
H Y T T N GG K A N GN K + G S+ + MR+
Sbjct: 57 VEHFYSTKDGAAQTNTSKSNSGGKKIAISQPNNSKGNSAGKEKSKGKH--VSSPDLMRQF 114
Query: 185 GEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAE 244
+ ++ + K W F PVDV L L DY+ +I+KPMDLGT++ K+E++ Y +E
Sbjct: 115 ATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYA 174
Query: 245 DVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ----MFQKLSKQQQR------------- 287
DVRL F NA+ YN + VY MAE+L KFE+ + KL +++++
Sbjct: 175 DVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQ 234
Query: 288 ------QGILGRG---------------------KAREMSLEEKMALGRSLEELPQEELG 320
Q + R + R++S +EK L +L L E+L
Sbjct: 235 LTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLSPEDLS 294
Query: 321 KLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
K L +V + N S E+ELDI+ + TL +L FV KA
Sbjct: 295 KALKMV---SESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKA 339
>gi|224116480|ref|XP_002317311.1| global transcription factor group [Populus trichocarpa]
gi|222860376|gb|EEE97923.1| global transcription factor group [Populus trichocarpa]
Length = 567
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
++C +L LM GW FN PVD V+L + DY II PMDLGTV+SKL N Y +E
Sbjct: 88 QQCSALLKSLMVHPAGWVFNKPVDPVALNIPDYFSIISIPMDLGTVKSKLGKNCYASIKE 147
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQG-ILGRGK 295
FA+D+RLTF+NA++YNP + V+ MAE L+ FE ++ L + +G G GK
Sbjct: 148 FADDIRLTFSNAMLYNPPTNNVHKMAEELNGIFETSWKALEDKWNHEGPKFGSGK 202
>gi|270001347|gb|EEZ97794.1| hypothetical protein TcasGA2_TC030708 [Tribolium castaneum]
Length = 815
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N Y
Sbjct: 356 ALKSCNEILKELFSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMDNREY 415
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+ QEFA DVRL F N YNP H V AMA L FE F K+
Sbjct: 416 RSAQEFAADVRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKI 460
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K + W F PVD L L DYH II++PMDLGT++ +L+NN Y +E +D
Sbjct: 46 VLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRLDNNYYWSGKECIQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRG 294
F N VYN G V MA+TL F K++ + + ++ +G
Sbjct: 106 NTMFTNCYVYNKPGEDVVVMAQTLEKVF---LTKVADMPKEEVVVAKG 150
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 652 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 708
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 709 LRELESYV 716
>gi|224061031|ref|XP_002300324.1| global transcription factor group [Populus trichocarpa]
gi|222847582|gb|EEE85129.1| global transcription factor group [Populus trichocarpa]
Length = 564
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ ++C +L LM GW FN PVD V+L++ DY +I PMDLGTV+SKL N Y
Sbjct: 79 RSVTQQCSSLLKSLMAHPAGWVFNKPVDPVALKIPDYFTVISNPMDLGTVKSKLGKNFYA 138
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQG-ILGRGK 295
EFA D+RLTF+NA++YNP + V+ MAE L+ FE ++ L + +G G GK
Sbjct: 139 SINEFAADIRLTFSNAMLYNPPSNNVHRMAEELNGIFETGWKALEENWNHEGPKFGSGK 197
>gi|328703281|ref|XP_001944541.2| PREDICTED: hypothetical protein LOC100164694 [Acyrthosiphon pisum]
Length = 1162
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C E+L +L K W F PVD L L DYHDIIKKPMDLGTV++KL+N Y
Sbjct: 342 ALKGCTEVLKELFTKKHAAYAWPFYKPVDAAWLGLHDYHDIIKKPMDLGTVKTKLDNREY 401
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K ++FA DV L F+N YNPK H V AMA+ L A FE K+
Sbjct: 402 KNSKDFAADVNLIFSNCYKYNPKDHDVVAMAKKLQAVFEAKMSKV 446
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 174 LTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN 233
LT+ N +++ ++ L K + W F PVD L L DYH +IK PMDLGTV+ +LEN
Sbjct: 69 LTNKLNFLQKT--VMKALWKHQHAWPFYQPVDASKLNLPDYHKVIKTPMDLGTVKKRLEN 126
Query: 234 NVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
N Y C E +D+ F+N YN G V MA+TL F ++ K++
Sbjct: 127 NYYWCADECIQDINAMFSNCYTYNKPGEDVVLMAQTLEKIFLAKMGQMVKEE 178
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 645 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 701
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 702 LRELESYV 709
>gi|219118433|ref|XP_002179989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408246|gb|EEC48180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1603
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 65/97 (67%)
Query: 188 LTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVR 247
L L + W FNTPVD V L L DY ++IKKPMDLGT+R KLEN VY+ +F E V
Sbjct: 582 LKTLQSHQHAWVFNTPVDPVELGLPDYFEVIKKPMDLGTIRKKLENGVYQRLDDFKEHVL 641
Query: 248 LTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
LTF+NA++YNP+G VY MA + KF+ F KL +Q
Sbjct: 642 LTFDNAMMYNPEGSVVYNMANEMKVKFQSDFVKLMEQ 678
>gi|432868098|ref|XP_004071410.1| PREDICTED: uncharacterized protein LOC101158947 [Oryzias latipes]
Length = 1443
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 184 CGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C ++ +++ K W F PVDV +L L DYHDIIK PMDL T+++KLEN Y+ PQ
Sbjct: 360 CAALVREMLSKKHAAYAWPFYKPVDVDALGLHDYHDIIKHPMDLSTIKAKLENRQYRDPQ 419
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG 292
EFA DVRL F+N YNP H V AMA L FE F K+ + + + ++
Sbjct: 420 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPESKHVVS 471
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K W F PVD + L L DY+ II PMDLGT++ +LEN+ Y QE +D
Sbjct: 49 VVKALWKHHFSWPFQAPVDAIKLNLPDYYTIIHTPMDLGTIKKRLENSYYWNAQECIQDF 108
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
F N +YN G + MAE L F QK+S+ Q +
Sbjct: 109 NTMFTNCYIYNKPGDDIVLMAEALEKVF---LQKVSEMPQEE 147
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 268 ETLSAKFEQMFQKLSKQQQRQGILGRG-KAREMSLEEKMALGRSLEELPQEELGKLLGIV 326
E + + Q + ++ G L G K + M+ EEK L + +LP ++LG+++ I+
Sbjct: 606 EVMKSNHPSSLQPVPSLEEELGSLVTGEKCKPMTYEEKRQLSLDINKLPGDKLGRVVHII 665
Query: 327 KKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
+ R + + DEIE+D E L TL +L R+V
Sbjct: 666 QSREPSLKN--SNPDEIEIDFETLKPSTLRELERYV 699
>gi|297826963|ref|XP_002881364.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
gi|297327203|gb|EFH57623.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
Length = 386
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 150/348 (43%), Gaps = 68/348 (19%)
Query: 78 VHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQ 137
VH K+ P + ++ F + T EL+D + +RV L ++ +
Sbjct: 3 VHVKEEPVLVPNCDVENTELAVFYVNGET--ELEDFGTCVDEITDRVNQLEQKVV----E 56
Query: 138 ATHAYPT--------TKSQNRGGSKRA-----NPFGNPKAKRAAAGTXSLTSTKNAMRRC 184
H Y + T N GG K A N N K + G S+ + MR+
Sbjct: 57 VEHFYSSKDGAAQTNTSKSNSGGKKVAISQPNNSKCNSAGKEKSKGKH--VSSPDLMRQF 114
Query: 185 GEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAE 244
+ ++ + K W F PVDV L L DY+ +I+KPMDLGT++ K+E++ Y +E
Sbjct: 115 ATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYA 174
Query: 245 DVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ----MFQKLSKQQQRQGI---------- 290
DVRL F NA+ YN + VY MAE+L KFE+ + KL +++++Q
Sbjct: 175 DVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQADEEAEKHANKQ 234
Query: 291 ---------LGRG---------------------KAREMSLEEKMALGRSLEELPQEELG 320
+ R + R++S +EK L +L L E+L
Sbjct: 235 LTLEAAQAEMARDLSNELYEIDLQLERLRESVVQRCRKLSTQEKKGLSAALGRLSPEDLS 294
Query: 321 KLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
K L +V + N S E+ELDI+ + TL +L FV KA
Sbjct: 295 KALKMV---SESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKA 339
>gi|444732332|gb|ELW72633.1| Bromodomain testis-specific protein [Tupaia chinensis]
Length = 556
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 57/237 (24%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 227 LRHCNEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKRKMDNQEYK 286
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAK-FEQMFQKLSK------------- 283
EFA DVRL F N YNP H V +MA L K Q Q LS+
Sbjct: 287 DAYEFAADVRLMFMNCYKYNPPDHEVVSMARMLQLKAVHQQLQVLSQVPFRKLKKKNEKS 346
Query: 284 ----------------------------------QQQRQGILG----RGKAREMSLEEKM 305
++++Q + A+ M+ +EK
Sbjct: 347 KREKKKAKVTNRDDNPRKKAKQMKLKEKPQSNQPKKRKQQVFALKSDEDNAKPMNYDEKR 406
Query: 306 ALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
L + +LP ++LG+++ I++ R + + DEIE+D E L TL +L ++V
Sbjct: 407 KLSLDINKLPGDKLGRVVHIIQSREPSLR--NSNPDEIEIDFETLKASTLRELEKYV 461
>gi|332026521|gb|EGI66642.1| Bromodomain-containing protein 2 [Acromyrmex echinatior]
Length = 1559
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 169 AGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLG 225
AG A++ C +IL +L K W F PVD L L DYHDIIKKPMDLG
Sbjct: 440 AGVKGKEKLSEALKSCNDILKELFAKKHSPYAWPFYKPVDAELLGLHDYHDIIKKPMDLG 499
Query: 226 TVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
TV++K++N YK EFA DVRL F N YNP H V +MA L FE + K+
Sbjct: 500 TVKTKMDNRQYKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKV 555
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K + W F PVD L L DYH IIKKPMDLGT++ +LEN+ Y +E +D
Sbjct: 116 VLKPVWKHQFAWPFQQPVDAKKLSLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDF 175
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+ L F ++ K++
Sbjct: 176 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEE 214
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 774 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 830
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 831 LRELESYV 838
>gi|307213342|gb|EFN88794.1| Homeotic protein female sterile [Harpegnathos saltator]
Length = 1514
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 169 AGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLG 225
AG S ++ C +IL +L K W F PVD L L DYH+IIKKPMDLG
Sbjct: 390 AGGKSKEKLSEPLKCCNDILKELFSKKHSGYAWPFYKPVDAELLGLHDYHEIIKKPMDLG 449
Query: 226 TVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
TV+SK++N YK QEFA DVRL F N YNP H V +MA L FE + K+
Sbjct: 450 TVKSKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKI 505
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K + W F PVD L L DYH II++PMDLGT++ +LEN Y +E +D
Sbjct: 70 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIERPMDLGTIKKRLENTYYWSGKECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+ L F ++ K++
Sbjct: 130 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEE 168
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 724 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 780
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 781 LRELESYV 788
>gi|255557483|ref|XP_002519772.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223541189|gb|EEF42745.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 570
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 69/111 (62%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+ + +C ++ LM GW F PVD L + DY +I PMDLGTV+SKLENN Y
Sbjct: 80 RGVIHQCTSLVKSLMNHPCGWVFKEPVDPEKLEIPDYFSVITNPMDLGTVKSKLENNQYF 139
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
+EFA DVRLTF+NAL+YNP +YV+ MAE L FE ++ L ++ Q
Sbjct: 140 GAEEFAADVRLTFSNALLYNPPLNYVHKMAEKLKKIFETRWKALEEKWNYQ 190
>gi|162287117|ref|NP_001104751.1| bromodomain-containing protein 4 [Danio rerio]
gi|159507457|gb|ABW97742.1| bromodomain 4 [Danio rerio]
Length = 1444
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 167 AAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMD 223
AA GT S + +R C I+ + K W F PVDV +L L DYHDIIK PMD
Sbjct: 351 AAPGTPS-PKQQEQLRYCSGIVKDMFAKKHAAYAWPFYKPVDVDTLGLHDYHDIIKHPMD 409
Query: 224 LGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
L T++ KLE Y+ QEFA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 410 LSTIKDKLETRQYREAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F+ PVD V L L DY+ IIK PMD+GT++ +LE+ Y QE +D
Sbjct: 55 VLKSLWKHQFAWPFHAPVDAVKLNLPDYYKIIKNPMDMGTIKKRLESAFYTSAQECIQDF 114
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN G + MAE L F ++ +Q+
Sbjct: 115 NTMFTNCYIYNKPGDDIVLMAEALEKVFLTKISEMPQQE 153
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP ++LG+++ I++ R + + DEIE+D E L T
Sbjct: 654 KCKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 711
Query: 355 LSQLVRFVDNFKKAEK 370
L +L R+V + + +K
Sbjct: 712 LRELERYVSSCLRKKK 727
>gi|413941779|gb|AFW74428.1| hypothetical protein ZEAMMB73_413666 [Zea mays]
Length = 757
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 16/209 (7%)
Query: 91 SLPESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRI------ANSDFQATHAYPT 144
S+P + V F+L TR + KDL +L +L +VR++ SR+ + + A + P
Sbjct: 66 SMPRAREV-FSLPRMTRLDKKDLEMKLRHELAQVRDVQSRLFLRGSAVSMNGAAVASVPA 124
Query: 145 TKSQNRGGSKRANPFGNPKAKRAAAGTX---------SLTSTKNAMRRCGEILTKLMKDK 195
Q + ++ + + R A S + ++ ++C +L +M
Sbjct: 125 GDVQPKKKVEKLKRSDSVQTDRGAPPPAATVVAAPVASSVNYTSSFKQCANLLKSIMSHV 184
Query: 196 QGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALV 255
F PVD+V L + DY I+K+PMDLGT++ KL+ +Y P+EFA DVRLTF+NA+
Sbjct: 185 WAGPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKKLKAGMYSTPREFAADVRLTFSNAMN 244
Query: 256 YNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
YNP + V+ MA+TLS FE ++ + K+
Sbjct: 245 YNPVNNDVHLMAKTLSKNFETRWKLIEKK 273
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 338 CHGDE--IELDIEALDNDTLSQLVRFVDNFKKA--EKDKTEKEP--MCSQVAVAVAAPVV 391
C DE +ELDI+ L +DTL +L + +D++ + ++ T+++P S+ + P V
Sbjct: 397 CDADEEEMELDIDVLGDDTLFELQQLLDDYDRVNPSRNLTKEDPHEAESRSQYELINPSV 456
Query: 392 IERSKKGDVAAEEEVDIGE-EIPVQNYPPVVIERDDA 427
G+ +E+VDIGE + P+ PPVV+E + A
Sbjct: 457 ---CNDGNELIDEDVDIGENDPPILALPPVVLEDETA 490
>gi|255577689|ref|XP_002529721.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223530823|gb|EEF32687.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 391
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 123/270 (45%), Gaps = 64/270 (23%)
Query: 140 HAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWA 199
H+ P+ + Q + SKR AA + + + MR+ G IL ++ + K W
Sbjct: 82 HSVPSIRKQQQDASKRE-----------AAASKRM---QELMRQFGTILRQITQHKWAWP 127
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV---YKCPQEFAEDVRLTFNNALVY 256
F PVDV L L DY+++I KPMD T+++++E YK +E DVRL F NA+ Y
Sbjct: 128 FMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQMETKDGTGYKNVREICADVRLVFKNAMKY 187
Query: 257 NPKGHYVYAMAETLSAKFEQMF--------------------QKLSKQQQRQGILGR--- 293
N + V+ MA+TL AKFE+ + +L Q ++ + +
Sbjct: 188 NDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREMEEAEAQLDMQLAQEAVHAKMAR 247
Query: 294 ---------------------GKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSG 332
K R++S EEK LG +L L E+L K L IV + N G
Sbjct: 248 ELSNELYEIDTHLDELRDMVVQKCRKISTEEKRKLGAALTRLSPEDLTKALEIVAQNNPG 307
Query: 333 NGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
+E++LDI+A TL +L FV
Sbjct: 308 ---FQATAEEVDLDIDAQTESTLWRLKFFV 334
>gi|347968593|ref|XP_003436250.1| AGAP002807-PB [Anopheles gambiae str. PEST]
gi|333467932|gb|EGK96763.1| AGAP002807-PB [Anopheles gambiae str. PEST]
Length = 1778
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 139 THAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ-- 196
T AYP + ++G S P PK K + +A++ C EIL +L K
Sbjct: 378 TSAYPMSPMAHQGSSSSQYP---PKNKEKLS---------DALKSCNEILKELFSKKHSG 425
Query: 197 -GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALV 255
W F PVD L L DYHDIIKKPMDLGTV+ K++N YK EFA DVRL F N
Sbjct: 426 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYK 485
Query: 256 YNPKGHYVYAMAETLSAKFE 275
YNP H V AM L FE
Sbjct: 486 YNPPDHDVVAMGRKLQDVFE 505
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K + W F PVD L L DYH IIK+PMDLGT++ +LENN Y +E +D
Sbjct: 44 VMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWTSKECIQDF 103
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
F N VYN G V MA+TL F
Sbjct: 104 NTMFTNCYVYNKPGEDVVVMAQTLEKLF 131
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 715 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 771
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 772 LRELESYV 779
>gi|427798983|gb|JAA64943.1| Putative bromodomain-containing protein 2, partial [Rhipicephalus
pulchellus]
Length = 852
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C IL +L K W F PVD L L DYH+IIK PMDLGTV+ K++N YK
Sbjct: 382 MKYCNSILKELFAKKHAGYAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNREYK 441
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+EFA DVRL F N YNP H V AMA L FE + K+
Sbjct: 442 SPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRYAKM 485
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 158 PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLM-KDKQGWAFNTPVDVVSLRLRDYHD 216
PF P ++R T N ++ +++ K M K + W F PVD V L L DYH
Sbjct: 48 PFVPPASRRQ--------RTTNQLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHR 99
Query: 217 IIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
II+ PMDLGT++ +LE+ Y QE ED + F N VYN G V MA+ L F
Sbjct: 100 IIRHPMDLGTIKKRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLT 159
Query: 277 MFQKLSKQQ 285
++ K++
Sbjct: 160 KITEMPKEE 168
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 685 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 741
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 742 LRELESYV 749
>gi|3033386|gb|AAC12830.1| putative RING3 protein [Arabidopsis thaliana]
Length = 400
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 152/362 (41%), Gaps = 82/362 (22%)
Query: 78 VHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQ 137
VH K+ P + ++ FN + EL++ + +RV L ++ +
Sbjct: 3 VHVKEEPVLVPNCDVENTELAVFNGNGES--ELENFGTCVDEITDRVNQLEQKVV----E 56
Query: 138 ATHAYPT--------TKSQNRGGSKRA-----NPFGNPKAKRAAAGTXSLTSTKNAMRRC 184
H Y T T N GG K A N GN K + G S+ + MR+
Sbjct: 57 VEHFYSTKDGAAQTNTSKSNSGGKKIAISQPNNSKGNSAGKEKSKGKH--VSSPDLMRQF 114
Query: 185 GEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAE 244
+ ++ + K W F PVDV L L DY+ +I+KPMDLGT++ K+E++ Y +E
Sbjct: 115 ATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYA 174
Query: 245 DVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ----MFQKLSKQQQRQ------------ 288
DVRL F NA+ YN + VY MAE+L KFE+ + KL +++++Q
Sbjct: 175 DVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQ 234
Query: 289 ------------------------------GILGRGKAR------------EMSLEEKMA 306
++ R + R ++S +EK
Sbjct: 235 LTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRVRNRVFGVVLEINRKLSTQEKKG 294
Query: 307 LGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFK 366
L +L L E+L K L +V + N S E+ELDI+ + TL +L FV
Sbjct: 295 LSAALGRLSPEDLSKALKMV---SESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEAL 351
Query: 367 KA 368
KA
Sbjct: 352 KA 353
>gi|356549150|ref|XP_003542960.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 566
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 68/102 (66%)
Query: 183 RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEF 242
+C IL LM W F PVD V+L + DY II PMDLGT++SKLE N+Y +EF
Sbjct: 82 QCATILKSLMSHSYSWVFLKPVDPVALSIPDYFTIISHPMDLGTIKSKLERNIYSGTEEF 141
Query: 243 AEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
A+DVRLTF+NA+ YNP G+ V+ MA+ LS F++ ++ ++
Sbjct: 142 ADDVRLTFSNAMKYNPPGNDVHMMAKELSKIFDRKWKDFGRK 183
>gi|410902639|ref|XP_003964801.1| PREDICTED: uncharacterized protein LOC101061335 [Takifugu rubripes]
Length = 1416
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 184 CGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C ++ +++ K W F PVD +L L DYHDIIK PMDL T+++KLEN Y+ PQ
Sbjct: 374 CASLVREMVSKKHAAYAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKAKLENRQYREPQ 433
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 434 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 474
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LEN+ Y QE +D
Sbjct: 57 VLKTLWKHQFAWPFQAPVDAVKLNLPDYYTIIKTPMDMGTIKKRLENSYYWNAQECIQDF 116
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN G + MAE L F Q ++ +++
Sbjct: 117 NTMFTNCYIYNKPGDDIVLMAEALEKVFLQKVTEMPQEE 155
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
+ M+ EEK L + +LP ++LG+++ I++ R + + DEIE+D E L TL
Sbjct: 651 KPMTYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKN--SNPDEIEIDFETLKPSTLR 708
Query: 357 QLVRFV 362
+L R+V
Sbjct: 709 ELERYV 714
>gi|198469092|ref|XP_002134216.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
gi|198146712|gb|EDY72843.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
Length = 1981
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 485 DALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE 544
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 545 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 590
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E D
Sbjct: 46 VMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIHDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIETMPKEE 144
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 950 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1006
Query: 355 LSQLVRFVDNFKKAEKDKTEKEP 377
L +L +V + KT K+P
Sbjct: 1007 LRELESYV---ASCLRKKTHKKP 1026
>gi|347968595|ref|XP_312107.4| AGAP002807-PA [Anopheles gambiae str. PEST]
gi|333467931|gb|EAA07774.4| AGAP002807-PA [Anopheles gambiae str. PEST]
Length = 870
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 139 THAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ-- 196
T AYP + ++G S P PK K + +A++ C EIL +L K
Sbjct: 378 TSAYPMSPMAHQGSSSSQYP---PKNKEKLS---------DALKSCNEILKELFSKKHSG 425
Query: 197 -GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALV 255
W F PVD L L DYHDIIKKPMDLGTV+ K++N YK EFA DVRL F N
Sbjct: 426 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYK 485
Query: 256 YNPKGHYVYAMAETLSAKFE 275
YNP H V AM L FE
Sbjct: 486 YNPPDHDVVAMGRKLQDVFE 505
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K + W F PVD L L DYH IIK+PMDLGT++ +LENN Y +E +D
Sbjct: 44 VMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWTSKECIQDF 103
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
F N VYN G V MA+TL F
Sbjct: 104 NTMFTNCYVYNKPGEDVVVMAQTLEKLF 131
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 715 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 771
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 772 LRELESYV 779
>gi|413921385|gb|AFW61317.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 770
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIAN------------------SDFQATH 140
F+L + T + KD+ RL +L +V++L R+ + SD
Sbjct: 75 VFSLPSMTALDKKDVEMRLHHELAQVKDLQIRLFSGGHNVGSMNGATVASAPGSDMLPKK 134
Query: 141 AYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAF 200
+ N + R P P A A S + ++ ++C +L LM F
Sbjct: 135 KAEKLRRSNSVQTDRGAP--PPMATAVAPPVSSSINYTSSFKQCANLLKSLMSHVWASPF 192
Query: 201 NTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKG 260
PVD+V L + DY I+K+PMDLGT++ +++ +Y P EFA DVRLTF+NA+ YNP
Sbjct: 193 LVPVDIVKLNIPDYFQIVKQPMDLGTIQKRMKAGMYSTPPEFAADVRLTFSNAMNYNPAN 252
Query: 261 HYVYAMAETLSAKFEQMFQKLSKQ 284
+ V+ MA+TLS FE ++ + K+
Sbjct: 253 NDVHLMAKTLSKNFESRWKLIEKK 276
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 341 DEIELDIEALDNDTLSQLVRFVDNFKKA--EKDKTEKEPM----CSQVAVAVAAPVVIER 394
+E+ELD++AL +DTL +L+R +D++ + ++ TE++P SQ + A+ E
Sbjct: 413 EELELDMDALGDDTLFELLRLLDDYDRVNPSRNLTEQDPHEVKSRSQYELINASVCNEEV 472
Query: 395 SKKGDVAAEEEVDIGE-EIPVQNYPPVVIERDDA 427
++ D E+VDIGE + PV +PP+V+E + A
Sbjct: 473 NELFD----EDVDIGENDPPVLTFPPLVLEDETA 502
>gi|195480258|ref|XP_002101200.1| GE17489 [Drosophila yakuba]
gi|194188724|gb|EDX02308.1| GE17489 [Drosophila yakuba]
Length = 2036
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 478 DALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE 537
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 538 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 583
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIHDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 946 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1002
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 1003 LRELESYV 1010
>gi|307182453|gb|EFN69688.1| Homeotic protein female sterile [Camponotus floridanus]
Length = 1541
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C +IL +L K W F PVD L L DYH+IIKKPMDLGTV++K++N Y
Sbjct: 435 ALKSCNDILKELFAKKHSSYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKAKMDNRQY 494
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K EFA DVRL F N YNP H V +MA L FE + K+
Sbjct: 495 KTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKV 539
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K + W F PVD L L DYH IIKKPMDLGT++ +LEN+ Y +E +D
Sbjct: 101 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDF 160
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+ L F ++ K++
Sbjct: 161 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEE 199
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 759 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 815
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 816 LRELESYV 823
>gi|194897170|ref|XP_001978604.1| GG17589 [Drosophila erecta]
gi|190650253|gb|EDV47531.1| GG17589 [Drosophila erecta]
Length = 2024
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 476 DALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE 535
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 536 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 581
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIHDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 944 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1000
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 1001 LRELESYV 1008
>gi|302834497|ref|XP_002948811.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
gi|300266002|gb|EFJ50191.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
Length = 767
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 38/285 (13%)
Query: 112 DLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANP--FGNPKAKRAAA 169
+L +L LE+V+ A + +A P S+ + + P F P KR
Sbjct: 33 ELIGKLAKALEKVK------AGAATAGVNAVPAAASKQPAAKRSSQPASFTGPDPKRPKL 86
Query: 170 GTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRS 229
+ + ++ R CG +L LMK K F PVD V + DY I PMDLGT+++
Sbjct: 87 DSETDKKIQDIWRMCGAVLDFLMKKKNAIVFLRPVDPVKDGVPDYFKFICHPMDLGTIKT 146
Query: 230 KLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQG 289
+L Y P+EFA DVRL + N YN G V M + LS +E+ + +L+ +Q+
Sbjct: 147 RLRERKYSDPREFAADVRLVWRNCATYNAVGTPVRIMGDQLSEDWERKWAELNVEQRWDA 206
Query: 290 ILGRGKAREMSLEEKMA------LGR--SLEELPQEELGKLLGIVKKRNSGNGSLSCHG- 340
++ + + L++++A L R S+ LP + + + V+KR G
Sbjct: 207 LVATRDPQTIPLDQRIASSARQLLQRVNSVHVLPDADPSRTMTTVEKRKLSIALSELQGN 266
Query: 341 ---------------------DEIELDIEALDNDTLSQLVRFVDN 364
+EIELD++ LDN TL +L + DN
Sbjct: 267 QLADVLNIIAENLKDINPDDEEEIELDVDQLDNQTLWRLREYCDN 311
>gi|357447117|ref|XP_003593834.1| Bromodomain-containing factor [Medicago truncatula]
gi|355482882|gb|AES64085.1| Bromodomain-containing factor [Medicago truncatula]
Length = 520
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 82/145 (56%), Gaps = 11/145 (7%)
Query: 143 PTTKSQNRGGSKRANPFGN---PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWA 199
P KS G +KR P GN PK KR + +C IL L+ W
Sbjct: 47 PIKKSSLLGSNKR-EPSGNIEGPKNKRQKLD-------RKGSHKCATILKCLISHPYSWV 98
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F TPVD V+L + DY +I PMDLGT++ KL+ N+Y +EFA DVRLTF+NA+ YNP
Sbjct: 99 FKTPVDPVALNIPDYFTVISHPMDLGTIKFKLDKNIYYSKEEFAADVRLTFSNAMTYNPP 158
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQ 284
+ V+ MA+ L+ FE+ ++ + K+
Sbjct: 159 SNDVHLMAKELNKLFERKWKDMDKK 183
>gi|322801602|gb|EFZ22243.1| hypothetical protein SINV_03245 [Solenopsis invicta]
Length = 877
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 169 AGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLG 225
AG A++ C +IL +L K W F PVD L L DYH+IIKKPMDLG
Sbjct: 381 AGVKGKEKLSEALKSCNDILKELFAKKHSPYAWPFYKPVDAELLGLHDYHEIIKKPMDLG 440
Query: 226 TVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
TV++K++N YK EFA DVRL F N YNP H V +MA L FE + K+
Sbjct: 441 TVKTKMDNRQYKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKV 496
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K + W F PVD L L DYH IIKKPMDLGT++ +LEN+ Y +E +D
Sbjct: 60 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDF 119
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+ L F ++ K++
Sbjct: 120 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEE 158
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 714 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 770
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 771 LRELESYV 778
>gi|62321808|dbj|BAD95432.1| RING3 protein-like [Arabidopsis thaliana]
Length = 386
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 150/348 (43%), Gaps = 68/348 (19%)
Query: 78 VHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQ 137
VH K+ P + ++ FN + EL++ + +RV L ++ +
Sbjct: 3 VHVKEEPVLVPNCDVENTELAVFNGNGES--ELENFGTCVDEITDRVNQLEQKVV----E 56
Query: 138 ATHAYPT--------TKSQNRGGSKRA-----NPFGNPKAKRAAAGTXSLTSTKNAMRRC 184
H Y T T + GG K A N GN K + G S+ + MR+
Sbjct: 57 VEHFYSTKDGAAQTNTSKSSSGGKKIAISQPNNSKGNSAGKEKSKGKH--VSSPDLMRQF 114
Query: 185 GEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAE 244
+ ++ + K W F PVDV L L DY+ +I+KPMDLGT++ K+E++ Y +E
Sbjct: 115 ATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYA 174
Query: 245 DVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ----MFQKLSKQQQR------------- 287
DVRL F NA+ YN + VY MAE+L KFE+ + KL +++++
Sbjct: 175 DVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQ 234
Query: 288 ------QGILGRG---------------------KAREMSLEEKMALGRSLEELPQEELG 320
Q + R + R++S +EK L +L L E+L
Sbjct: 235 LTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLSPEDLS 294
Query: 321 KLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
K L +V + N S E+ LDI+ + TL +L FV KA
Sbjct: 295 KALKMV---SESNPSFPAGAPEVGLDIDVQTDVTLWRLKVFVQEALKA 339
>gi|413921384|gb|AFW61316.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 558
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 99 TFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIAN------------------SDFQATH 140
F+L + T + KD+ RL +L +V++L R+ + SD
Sbjct: 75 VFSLPSMTALDKKDVEMRLHHELAQVKDLQIRLFSGGHNVGSMNGATVASAPGSDMLPKK 134
Query: 141 AYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAF 200
+ N + R P P A A S + ++ ++C +L LM F
Sbjct: 135 KAEKLRRSNSVQTDRGAP--PPMATAVAPPVSSSINYTSSFKQCANLLKSLMSHVWASPF 192
Query: 201 NTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKG 260
PVD+V L + DY I+K+PMDLGT++ +++ +Y P EFA DVRLTF+NA+ YNP
Sbjct: 193 LVPVDIVKLNIPDYFQIVKQPMDLGTIQKRMKAGMYSTPPEFAADVRLTFSNAMNYNPAN 252
Query: 261 HYVYAMAETLSAKFEQMFQKLSKQ 284
+ V+ MA+TLS FE ++ + K+
Sbjct: 253 NDVHLMAKTLSKNFESRWKLIEKK 276
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 341 DEIELDIEALDNDTLSQLVRFVDNFKKA--EKDKTEKEPM----CSQVAVAVAAPVVIER 394
+E+ELD++AL +DTL +L+R +D++ + ++ TE++P SQ + A+ E
Sbjct: 413 EELELDMDALGDDTLFELLRLLDDYDRVNPSRNLTEQDPHEVKSRSQYELINASVCNEEV 472
Query: 395 SKKGDVAAEEEVDIGE-EIPVQNYPPVVIERDDA 427
++ D E+VDIGE + PV +PP+V+E + A
Sbjct: 473 NELFD----EDVDIGENDPPVLTFPPLVLEDETA 502
>gi|24640482|ref|NP_511078.2| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
gi|68067442|sp|P13709.2|FSH_DROME RecName: Full=Homeotic protein female sterile; AltName:
Full=Fragile-chorion membrane protein
gi|22831925|gb|AAF46312.3| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
Length = 2038
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 479 DALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE 538
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 539 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 949 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1005
Query: 355 LSQLVRFVDNFKKAEKDKTEKEP 377
L +L +V + KT K+P
Sbjct: 1006 LRELESYV---ASCLRKKTHKKP 1025
>gi|442615454|ref|NP_001259321.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
gi|440216522|gb|AGB95166.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
Length = 2046
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 479 DALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE 538
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 539 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 949 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1005
Query: 355 LSQLVRFVDNFKKAEKDKTEKEP 377
L +L +V + + KT K+P
Sbjct: 1006 LRELESYVAS---CLRKKTHKKP 1025
>gi|157453|gb|AAA28540.1| 7.6 kb fsh membrane protein [Drosophila melanogaster]
Length = 2038
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 479 DALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE 538
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 539 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 949 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1005
Query: 355 LSQLVRFVDNFKKAEKDKTEKEP 377
L +L +V + KT K+P
Sbjct: 1006 LRELESYV---ASCLRKKTHKKP 1025
>gi|47208417|emb|CAF92198.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1579
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 184 CGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C ++ +++ K W F PVD +L L DYHDIIK PMDL T++ KLEN Y+ PQ
Sbjct: 443 CASLVREMLSKKHAAYAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKVKLENRQYREPQ 502
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 503 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 543
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 32/131 (24%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRL--------------------------------RDY 214
+L L K + W F+ PVD V L L +DY
Sbjct: 51 VLKTLWKHQFAWPFHAPVDAVKLNLPVSVAPRDCSHLDIQYKYYTQFCEVNCQMQSLQDY 110
Query: 215 HDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
+ IIK PMD+GT++ +LEN+ Y QE +D F N +YN G + MAE L F
Sbjct: 111 YTIIKTPMDMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKVF 170
Query: 275 EQMFQKLSKQQ 285
Q ++ +++
Sbjct: 171 LQKVTEMPQEE 181
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
+ M+ EEK L + +LP ++LG+++ I++ R + + DEIE+D E L TL
Sbjct: 712 KPMTYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKN--SNPDEIEIDFETLKPSTLR 769
Query: 357 QLVRFV 362
+L R+V
Sbjct: 770 ELERYV 775
>gi|241604623|ref|XP_002405922.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
gi|215502589|gb|EEC12083.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
Length = 885
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C IL +L K W F PVD L L DYH+IIK PMDLGTV+ K++N YK
Sbjct: 397 MKYCNSILKELFAKKHAGYAWPFYKPVDADLLGLHDYHEIIKHPMDLGTVKQKMDNREYK 456
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+EFA DVRL F N YNP H V AMA L FE + K+
Sbjct: 457 SPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRYAKM 500
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 51/99 (51%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K + W F PVD V L L DYH II PMDLGT++ +LEN Y E +D
Sbjct: 46 VMKAIWKHQFAWPFQQPVDTVRLNLPDYHRIIDHPMDLGTIKKRLENYYYASASECIQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+ L F ++ K++
Sbjct: 106 NTMFTNCYVYNKPGEDVVLMAQALEKLFLTKINEMPKEE 144
>gi|14164429|dbj|BAB55682.1| P0047B08.5 [Oryza sativa Japonica Group]
Length = 370
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 95/184 (51%), Gaps = 13/184 (7%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
+A+ RCG++L KL++ + GW F PVD +LRL DY+ I PMDLGTVR +LE Y
Sbjct: 176 DALLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYAD 235
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKARE 298
P FA DVRLTFNNA+ YN G VY A LS FE + + R
Sbjct: 236 PWAFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPSVLA----------APPRP 285
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQL 358
E K L L LP + I+KKR +G L +E+D++ D+ TL +L
Sbjct: 286 PDAERKRRLSGLLPRLPVGAQVTVAEIMKKR---DGCLREVNGMMEVDLDRADSATLDEL 342
Query: 359 VRFV 362
R V
Sbjct: 343 DRMV 346
>gi|195355783|ref|XP_002044367.1| GM11218 [Drosophila sechellia]
gi|194130685|gb|EDW52728.1| GM11218 [Drosophila sechellia]
Length = 1272
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 481 DALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE 540
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 541 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 586
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 898 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 954
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 955 LRELESYV 962
>gi|356557783|ref|XP_003547190.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 565
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%)
Query: 183 RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEF 242
+C IL LM W F+ PVD ++L + DY II PMDLGT++SKLE N+Y +EF
Sbjct: 82 QCATILKSLMSHTYSWVFSKPVDPIALSIPDYFTIISHPMDLGTIKSKLEKNIYSGTEEF 141
Query: 243 AEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
A DVRLTF+NA+ YNP + V+ MA+ LS F++ ++ L ++
Sbjct: 142 AADVRLTFSNAMKYNPPSNDVHLMAKELSKIFDRKWKDLGRK 183
>gi|345488357|ref|XP_001603224.2| PREDICTED: hypothetical protein LOC100119446 isoform 1 [Nasonia
vitripennis]
Length = 1549
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++ Y
Sbjct: 389 ALKSCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREY 448
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V AMA+ L FE + K+
Sbjct: 449 NTASEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKI 493
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD L L DYH IIK MDLGT++ +LEN Y +E +D+
Sbjct: 70 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+TL F ++ K++
Sbjct: 130 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQMPKEE 168
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 696 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 752
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 753 LRELENYV 760
>gi|345488359|ref|XP_003425887.1| PREDICTED: hypothetical protein LOC100119446 isoform 3 [Nasonia
vitripennis]
Length = 1549
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++ Y
Sbjct: 395 ALKSCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREY 454
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V AMA+ L FE + K+
Sbjct: 455 NTASEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKI 499
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD L L DYH IIK MDLGT++ +LEN Y +E +D+
Sbjct: 76 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 135
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+TL F ++ K++
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQMPKEE 174
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 702 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 758
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 759 LRELENYV 766
>gi|345488355|ref|XP_003425886.1| PREDICTED: hypothetical protein LOC100119446 isoform 2 [Nasonia
vitripennis]
gi|345488361|ref|XP_003425888.1| PREDICTED: hypothetical protein LOC100119446 isoform 4 [Nasonia
vitripennis]
Length = 1555
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++ Y
Sbjct: 395 ALKSCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREY 454
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V AMA+ L FE + K+
Sbjct: 455 NTASEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKI 499
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD L L DYH IIK MDLGT++ +LEN Y +E +D+
Sbjct: 76 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 135
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+TL F ++ K++
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQMPKEE 174
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 702 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 758
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 759 LRELENYV 766
>gi|195457098|ref|XP_002075425.1| GK15212 [Drosophila willistoni]
gi|194171510|gb|EDW86411.1| GK15212 [Drosophila willistoni]
Length = 2114
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 525 DALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE 584
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 585 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 630
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E D
Sbjct: 87 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKEAILDF 146
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 147 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 185
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 987 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1043
Query: 355 LSQLVRFVDNFKKAEKDKTEKEP 377
L +L +V + KT K+P
Sbjct: 1044 LRELESYV---ASCLRKKTHKKP 1063
>gi|357134548|ref|XP_003568879.1| PREDICTED: transcription factor GTE8-like, partial [Brachypodium
distachyon]
Length = 574
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
R+C +L KLM GW F+ PVD V + DY D+I+ PMDLGTV+ KL N Y E
Sbjct: 64 RQCKNVLEKLMGHTGGWLFHEPVDPVLFGIPDYFDVIRNPMDLGTVKKKLTNKNYPSTDE 123
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
FA DVRLTF+NA+ YNP G++V+ +AE L+ F+ + KL +++ R
Sbjct: 124 FAADVRLTFSNAMKYNPPGNFVHTVAEQLNGIFDSEW-KLYERKWR 168
>gi|242009661|ref|XP_002425601.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
gi|212509494|gb|EEB12863.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
Length = 803
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Query: 152 GSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVS 208
G A P G P + + + S +++ C EIL +L K W F PVD
Sbjct: 326 GFAAAVPIGLPPSGPTSGSSKEKLS--ESLKSCNEILKELFSRKHAGYAWPFYKPVDAEL 383
Query: 209 LRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAE 268
L L DYH+IIKKPMDLGTV++K++N Y+ EFA DVRL F N YNP H V AMA
Sbjct: 384 LGLHDYHEIIKKPMDLGTVKTKMDNRQYRTASEFAADVRLIFTNCYKYNPSTHDVVAMAR 443
Query: 269 TLSAKFEQMFQKL 281
L FE + K+
Sbjct: 444 KLQDVFEMRYAKI 456
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W PVD L L DYH IIK+PMDL T++ +LENN Y +E +D
Sbjct: 64 VIKAVCAHKYAWPLLEPVDAKKLNLPDYHRIIKQPMDLTTIKKRLENNYYWNAKECIQDF 123
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN V MA+ + F L K++
Sbjct: 124 NTMFTNCYVYNQPQEDVVVMAQIVEKLFLTKISTLPKEE 162
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
AR MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 643 ARPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 699
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEP 377
L +L +V + KK K + K+P
Sbjct: 700 LRELEAYVASCLRKKPRKPYSYKKP 724
>gi|442615456|ref|NP_001259322.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
gi|440216523|gb|AGB95167.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
Length = 1105
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 474 DALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE 533
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 534 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 579
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 944 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1000
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 1001 LRELESYV 1008
>gi|24640484|ref|NP_727228.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45554398|ref|NP_996368.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|45554406|ref|NP_996369.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45554416|ref|NP_996370.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|281360582|ref|NP_001162699.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
gi|157455|gb|AAA28541.1| 5.9 kb fsh membrane protein [Drosophila melanogaster]
gi|22831926|gb|AAN09226.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45446848|gb|AAS65277.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|45446849|gb|AAS65278.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45446850|gb|AAS65279.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|51092171|gb|AAT94499.1| LD26482p [Drosophila melanogaster]
gi|220945958|gb|ACL85522.1| fs(1)h-PA [synthetic construct]
gi|272506027|gb|ACZ95234.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
Length = 1110
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 479 DALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE 538
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 539 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 949 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1005
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 1006 LRELESYV 1013
>gi|442615458|ref|NP_001259323.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
gi|440216524|gb|AGB95168.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
Length = 1115
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 484 DALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE 543
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 544 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 589
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 954 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1010
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 1011 LRELESYV 1018
>gi|162135989|ref|NP_001085290.1| uncharacterized protein LOC443648 [Xenopus laevis]
gi|115313740|gb|AAI23909.1| LOC443648 protein [Xenopus laevis]
gi|159507463|gb|ABW97744.1| bromodomain 4 [Xenopus laevis]
Length = 1351
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 143 PTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWA 199
PT K++ A P +P+ A T T +R C I+ ++ K W
Sbjct: 337 PTKKTEVPDSQLPAPPVLHPQP---APNAERDTKTSEQLRYCASIIREMFSKKHQAYAWP 393
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVDV +L L DY +IIK PMDLGT++ K+EN YK QEFA DVRL F+N YNP
Sbjct: 394 FYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRDYKEAQEFASDVRLMFSNCYKYNPP 453
Query: 260 GHYVYAMAETLSAKFEQMFQKL 281
H V MA L FE F K+
Sbjct: 454 DHEVVIMARKLQDVFEMRFAKM 475
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVDVV L L DYH IIK PMD+GT++ +LEN+ Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL------GRGKARE 298
F N +YN G + MAE L F QK+S+ Q + L GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLF---LQKISEMPQEETELTVVQSKGRGRGRK 184
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
+ R MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 632 RCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 689
Query: 355 LSQLVRFVDNF---KKAEKDKTE 374
L +L R+V + K+ +DK E
Sbjct: 690 LRELERYVTSCLRKKRKSQDKIE 712
>gi|195130189|ref|XP_002009535.1| GI15407 [Drosophila mojavensis]
gi|193907985|gb|EDW06852.1| GI15407 [Drosophila mojavensis]
Length = 2056
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 506 DALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE 565
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 566 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 611
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKEAIHDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFTNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 951 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1007
Query: 355 LSQLVRFVDNFKKAEKDKTEKEP 377
L +L +V + KT K+P
Sbjct: 1008 LRELESYV---ASCLRKKTHKKP 1027
>gi|224013522|ref|XP_002296425.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968777|gb|EED87121.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1718
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%)
Query: 183 RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEF 242
+C EIL +L + GW F TPVD V L L DY D+IKKPMDLGT+ +L+N Y +F
Sbjct: 834 KCVEILRELQIHEHGWVFATPVDPVELGLDDYFDVIKKPMDLGTISRRLDNGSYHAFDDF 893
Query: 243 AEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
DVRLTF NA+ YN + V+ MA+ L KF+ ++KL KQ +++
Sbjct: 894 KSDVRLTFENAMKYNDENSVVHEMAKELKKKFDTDYKKLMKQLEKE 939
>gi|348536160|ref|XP_003455565.1| PREDICTED: bromodomain-containing protein 3 [Oreochromis niloticus]
Length = 678
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C IL +++ K W F PVD +L L DYHDIIK PMDL T+R K++ Y
Sbjct: 308 MKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGEYS 367
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
PQ FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 368 DPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 411
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH +IK PMD+GT++ +LENN Y E +D
Sbjct: 43 VVKTLWKHQFAWPFYQPVDAIKLCLHDYHKVIKNPMDMGTIKKRLENNYYWSASEAMQDF 102
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
F N +YN + MA+ L F QK+++ Q + L
Sbjct: 103 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVAL 144
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 292 GRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEAL 350
G + MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L
Sbjct: 559 GEESSLPMSYDEKRQLSLDINRLPGEKLGRVVHIIQTREP---SLRDSNPDEIEIDFETL 615
Query: 351 DNDTLSQLVRFV 362
TL +L R+V
Sbjct: 616 KPSTLRELERYV 627
>gi|397609097|gb|EJK60217.1| hypothetical protein THAOC_19472 [Thalassiosira oceanica]
Length = 1735
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 70/119 (58%)
Query: 183 RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEF 242
+CGEIL L + GW F+TPV+ V L L DY DIIKKPMDLGT+ KLE Y EF
Sbjct: 860 KCGEILKSLQNHENGWVFSTPVNPVELGLDDYFDIIKKPMDLGTIGKKLEQGSYHSFDEF 919
Query: 243 AEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSL 301
DVRLTF NA+ YN + V+ MA+ KF++ ++K+ K ++ KA L
Sbjct: 920 KSDVRLTFENAMKYNEEQTVVHEMAKGFKKKFDEDYKKMLKSLDKEHAENSKKAHACGL 978
>gi|339245937|ref|XP_003374602.1| putative bromodomain protein [Trichinella spiralis]
gi|316972199|gb|EFV55887.1| putative bromodomain protein [Trichinella spiralis]
Length = 847
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C I+ +L+ + W F PVDV L L DY+D+I+ PMDLGTVR KLE Y
Sbjct: 370 MKFCYGIVKELLSKRHSEYAWPFYKPVDVEGLGLHDYYDVIEVPMDLGTVRRKLECREYG 429
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P EFA DVRL F+N YNP H V MA+T+S FEQ F +L
Sbjct: 430 SPSEFAADVRLIFSNCYRYNPPDHEVVKMAKTISEIFEQRFAQL 473
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 117 LVSDLERVRNLGSRIANSDFQAT--HAYPTTKSQNRGGSKRANPFGNPK----AKRAAAG 170
L+ L V + + I+ DF H P S +R P +P R A
Sbjct: 32 LIEKLSPVHDGSTAISECDFSEDEPHYEPAEASSSRTEQPWETPVMDPVNGIVQPRVVAP 91
Query: 171 TXSLTSTKNAMRRC-GEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRS 229
T N + E+L +++ K W F+ PVD L L DYHDIIK+PMDLGT+
Sbjct: 92 PGKPTRNTNQLEFMQKEVLRAVLRHKHSWPFSKPVDAAKLNLVDYHDIIKRPMDLGTIEK 151
Query: 230 KLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ---- 285
+L N Y Q+ +D F N YNP G + MA+ L F + + ++
Sbjct: 152 RLRNCYYYSSQQSMQDFMTMFTNCYTYNPPGSDIVVMAQALEKVFLEKIAHMPSEEIEIP 211
Query: 286 ----QRQGILGRGKA 296
Q++G +GK+
Sbjct: 212 RPSTQKRGRHKKGKS 226
>gi|157126758|ref|XP_001654739.1| hypothetical protein AaeL_AAEL002090 [Aedes aegypti]
gi|108882525|gb|EAT46750.1| AAEL002090-PA, partial [Aedes aegypti]
Length = 506
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 142 YPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GW 198
YP + Q G ++ NP PK KR+ MR C EIL +L K W
Sbjct: 299 YPISPYQGSGAAQ--NP---PKTKRSFR-----------MRSCNEILKELFSKKHSGYAW 342
Query: 199 AFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP 258
F PVD L L DYHDIIKKPMDLGTV+ K++N YK EFA DVRL F N YNP
Sbjct: 343 PFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYKSANEFAADVRLIFTNCYKYNP 402
Query: 259 KGHYVYAMAETLSAKFE 275
H V AM L FE
Sbjct: 403 PDHDVVAMGRKLQDVFE 419
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K + W F PVD L L DYH IIK+PMDLGT++ +LENN Y +E +D
Sbjct: 24 VMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWTSKESIQDF 83
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
+ F+N VYN G V MA+ L F
Sbjct: 84 NIMFSNCYVYNKPGEDVVVMAQALEKLF 111
>gi|195565677|ref|XP_002106425.1| GD16134 [Drosophila simulans]
gi|194203801|gb|EDX17377.1| GD16134 [Drosophila simulans]
Length = 1038
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 455 DALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE 514
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AM L FE + +
Sbjct: 515 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 560
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 924 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 980
Query: 355 LSQLVRFVDNFKKAEKDKTEKEPMCSQV 382
L +L +V + + K ++P C V
Sbjct: 981 LRELESYVASCLR----KKTRKPYCKFV 1004
>gi|47212213|emb|CAF94980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C IL +++ K W F PVD +L L DYHDIIK PMDL T+R K++ Y
Sbjct: 287 MKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGEYS 346
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
PQ FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 347 EPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 390
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH +IK PMD+GT++ +LENN Y +D
Sbjct: 27 VVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRLENNYYWSASGAMQDF 86
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL------GRGKAREMS 300
F N +YN + MA+ L F QK+++ Q + L G+ K+++ S
Sbjct: 87 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVALLPPAPKGKNKSKQPS 143
>gi|170036200|ref|XP_001845953.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878751|gb|EDS42134.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 848
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 408 DALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE 467
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
YK EFA DVRL F N YNP H V AM L FE
Sbjct: 468 YKSANEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFE 507
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K + W F PVD L L DYH IIK+PMDLGTV+ +LENN Y +E +D
Sbjct: 68 VMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTVKKRLENNYYWTSKEAIQDF 127
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
+ F+N VYN G V MA+TL F
Sbjct: 128 NIMFSNCYVYNKPGEDVVVMAQTLEKLF 155
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 700 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 756
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 757 LRELESYV 764
>gi|312373441|gb|EFR21184.1| hypothetical protein AND_17422 [Anopheles darlingi]
Length = 1442
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 24 DALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE 83
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
YK EFA DVRL F N YNP H V AM L FE
Sbjct: 84 YKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFE 123
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 339 AMPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 395
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 396 LRELESYV 403
>gi|297597282|ref|NP_001043715.2| Os01g0648700 [Oryza sativa Japonica Group]
gi|55296880|dbj|BAD68333.1| PSTVd RNA-biding protein-like [Oryza sativa Japonica Group]
gi|255673505|dbj|BAF05629.2| Os01g0648700 [Oryza sativa Japonica Group]
Length = 238
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 162 PKAKRAAAGTXSLTS-TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
P A+ G + + +A+ RCG++L KL++ + GW F PVD +LRL DY+ I
Sbjct: 33 PAVAAASPGVAGVPADLGDALLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISD 92
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
PMDLGTVR +LE Y P FA DVRLTFNNA+ YN G VY A LS FE +
Sbjct: 93 PMDLGTVRRRLERRRYADPWAFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPS 152
Query: 281 LSKQQQRQGILGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHG 340
+ R E K L L LP + I+KKR +G L
Sbjct: 153 VLAAPPRPP----------DAERKRRLSGLLPRLPVGAQVTVAEIMKKR---DGCLREVN 199
Query: 341 DEIELDIEALDNDTLSQLVRFV 362
+E+D++ D+ TL +L R V
Sbjct: 200 GMMEVDLDRADSATLDELDRMV 221
>gi|219118718|ref|XP_002180126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408383|gb|EEC48317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1056
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 72/119 (60%)
Query: 183 RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEF 242
+C ++L LM + GW FN PVD V L L DY +IIKKPMDLGT++ +LE++ Y +F
Sbjct: 178 KCLDVLKGLMAHQHGWVFNGPVDPVELGLVDYFEIIKKPMDLGTIQKRLESSAYHSIDDF 237
Query: 243 AEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSL 301
D+ LTF NA+VYN G VY MA+ L K E ++L Q + + + R R +L
Sbjct: 238 KTDIFLTFENAMVYNEDGSVVYDMAKQLKVKAESDMKRLVAQLETEDLERRQNERACTL 296
>gi|432847788|ref|XP_004066150.1| PREDICTED: uncharacterized protein LOC101159647 [Oryzias latipes]
Length = 1469
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L +++ K W F PVD +L L DYHDIIK PMDL T++ KL+N Y+
Sbjct: 434 LRFCARLLKEMLSKKHVAYAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKKKLDNRQYR 493
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V +MA L FE F K+
Sbjct: 494 DAQEFAADVRLMFSNCYKYNPPDHDVVSMARKLQDVFEMRFAKM 537
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 49 VLKTLWKHHFAWPFQAPVDAVKLGLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 108
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK---AREMSLEE 303
F N +YN G + MAE L F Q ++ +++ +L +G+ RE+ L
Sbjct: 109 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKITEMPQEETEISVLTKGRRGVRRELGLST 168
Query: 304 K 304
K
Sbjct: 169 K 169
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
+ + MS EEK L + +LP ++LG+++ I++ R + + DEIE+D E L T
Sbjct: 735 RCKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLK--NSNPDEIEIDFETLKPST 792
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 793 LRELEKYV 800
>gi|224109720|ref|XP_002315289.1| global transcription factor group [Populus trichocarpa]
gi|222864329|gb|EEF01460.1| global transcription factor group [Populus trichocarpa]
Length = 318
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 53/242 (21%)
Query: 164 AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMD 223
+KR AA + + MR+ G IL ++ + K W F PVDV LRL DY+++I KPMD
Sbjct: 74 SKREAAAAKRM---QELMRQFGTILRQITQHKWAWPFMQPVDVKGLRLHDYYEVIDKPMD 130
Query: 224 LGTVRSKLE---NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
T+++++E YK +E + DVRL F NA+ YN + V+ MA+TL KFE+ + +
Sbjct: 131 FSTIKNQMEAKDGTGYKNVREISADVRLVFKNAMKYNDERSDVHVMAKTLLGKFEEKWLQ 190
Query: 281 L-----------------------SKQQQRQGILGRG---------------------KA 296
L Q+ + R K
Sbjct: 191 LLPKVTEEEKRREDEEVEAKLDMQLAQEAAHAKMARDLSNELYEVDMHLEELRDIVVQKC 250
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+MS EEK LG +L L E+L K L IV + N G +E++LDI+A TL
Sbjct: 251 RKMSTEEKRKLGVALTRLSPEDLTKALEIVARSNPG---FQATAEEVDLDIDAQTESTLW 307
Query: 357 QL 358
+L
Sbjct: 308 RL 309
>gi|395530391|ref|XP_003767279.1| PREDICTED: bromodomain testis-specific protein [Sarcophilus
harrisii]
Length = 840
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL ++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 213 LKYCNEILKEMFAKKHVAYAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMDNQEYK 272
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V AMA TL FE F K+
Sbjct: 273 DAHEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFEMQFAKI 316
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 211 LRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETL 270
+ DY+ IIKKPMDL T++ +LE+ Y E ED++ F N +YN G + MA+ L
Sbjct: 1 MMDYYSIIKKPMDLSTIKKRLEHKYYVKSSECIEDLKTMFANCYLYNKPGDDIVLMAQAL 60
Query: 271 SAKFEQMF-QKLSKQQQRQGILGRGKARE 298
E++F QK+S+ + ++G GK R+
Sbjct: 61 ----EKLFTQKMSQMPPEEQVIG-GKERK 84
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + +LP ++LG+++ I++ R SL + + DEIE+D E L TL +
Sbjct: 452 MNYDEKRQLSLDINKLPGDKLGRVVHIIESREP---SLRNSNPDEIEIDFETLKASTLRE 508
Query: 358 LVRFV 362
L ++V
Sbjct: 509 LEKYV 513
>gi|194211115|ref|XP_001493233.2| PREDICTED: bromodomain testis-specific protein-like isoform 2
[Equus caballus]
Length = 928
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDII 218
P +++ S+ T+ +R C EIL +++ K W F PVDV +L L +Y+D++
Sbjct: 254 PDSQQQCKAVKSIKVTEQ-LRHCSEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDVV 312
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
KKPMDLGT++ K++N YK EFA DVRL F N YNP H V MA L FE F
Sbjct: 313 KKPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFEMHF 372
Query: 279 QKL 281
K+
Sbjct: 373 AKI 375
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LE+ Y E ED
Sbjct: 38 VLKALWKHGFSWPFQQPVDAVKLQLPDYYTIIKNPMDLNTIQKRLEHKYYVKASECIEDF 97
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
F+N +YN G + MA+ L F QKLS+ Q + ++G GK R
Sbjct: 98 NTMFSNCYLYNKPGDDIVLMAQALEKLFR---QKLSQMPQEEQVVG-GKER 144
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 292 GRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEAL 350
G A+ MS +EK L + +LP ++LG+++ I++ R SL + + DEIE+D E L
Sbjct: 502 GEDNAKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRNSNPDEIEIDFETL 558
Query: 351 DNDTLSQLVRFV 362
TL +L ++V
Sbjct: 559 KASTLRELEKYV 570
>gi|255580043|ref|XP_002530855.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223529579|gb|EEF31529.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 536
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 69/111 (62%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ + +C ++ LM GW F PVD L + DY II PMDLGTV+SKLENN Y
Sbjct: 80 RSVIHQCASLVKSLMDHPCGWVFKEPVDPDKLHIPDYFSIITNPMDLGTVKSKLENNQYF 139
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
+EFA DVRLTF+NAL+YN +YV+ MAE L FE ++ L ++ Q
Sbjct: 140 ESEEFAADVRLTFSNALLYNTPPNYVHNMAEKLKKIFETRWKALEEKWNYQ 190
>gi|19171509|emb|CAC84085.1| hypothetical protein [Takifugu rubripes]
Length = 701
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C IL +++ K W F PVD +L L DYHDIIK PMDL T+R K++ Y
Sbjct: 297 MKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGEYN 356
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
PQ FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 357 EPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 400
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH +IK PMD+GT++ +LENN Y E +D
Sbjct: 43 VVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRLENNYYWSASEAMQDF 102
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL------GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L G+ K+++
Sbjct: 103 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVALLPPAPKGKNKSKQ 157
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 292 GRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEAL 350
G A MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L
Sbjct: 544 GEESALPMSYDEKRQLSLDINRLPGEKLGRVVHIIQTREP---SLRDSNPDEIEIDFETL 600
Query: 351 DNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPV 390
TL +L R+V + + ++ K C +V A V
Sbjct: 601 KPSTLRELERYVKSCLQKKQRKLLHAFTCGSTTGSVWAVV 640
>gi|356565711|ref|XP_003551081.1| PREDICTED: uncharacterized protein LOC100797746 [Glycine max]
Length = 738
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 117/246 (47%), Gaps = 53/246 (21%)
Query: 164 AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMD 223
++R AA + + ++ MR+ G IL ++ + K W F PVD+ L L DY+++I KPMD
Sbjct: 456 SRREAAASKRM---QDLMRQFGTILRQITQHKWAWPFMQPVDIEGLGLHDYYEVIDKPMD 512
Query: 224 LGTVRSKLE---NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
T+++++E YK +E DVRL F NA+ YN + V+ MA+TL +KFE+ + +
Sbjct: 513 FSTIKNQMEAKDGTGYKHVREICADVRLVFKNAMKYNDERSDVHVMAKTLLSKFEEKWLQ 572
Query: 281 L-----------------------SKQQQRQGILGRG---------------------KA 296
L Q+ Q + R +
Sbjct: 573 LLPKVTEEETRREEEEAEAQLALQVAQEAAQAKMARDLSNELYEVDVILEELREMVVKRF 632
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+MS EEK LG +L L E+L K L IV + N S +E++LD++A TL
Sbjct: 633 RKMSTEEKRKLGDALTRLSPEDLSKALEIVAQNNP---SFQATAEEVDLDMDAQSESTLW 689
Query: 357 QLVRFV 362
+L FV
Sbjct: 690 RLKFFV 695
>gi|224098028|ref|XP_002311109.1| global transcription factor group [Populus trichocarpa]
gi|222850929|gb|EEE88476.1| global transcription factor group [Populus trichocarpa]
Length = 370
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 107/231 (46%), Gaps = 50/231 (21%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NNVYK 237
MR+ G IL ++ + K W F PVDV L L DY+++I KPMD T+++++E YK
Sbjct: 91 MRQFGTILRQITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYK 150
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ-MFQKLSK------------- 283
+E DVRL F NA+ YN + V+ MA+TL KFE+ Q L K
Sbjct: 151 SVREICADVRLVFKNAMKYNDERSDVHVMAKTLLGKFEEKWLQFLPKVTEEEKRREEEEA 210
Query: 284 ---------QQQRQGILGRG---------------------KAREMSLEEKMALGRSLEE 313
Q+ + R K R+MS EEK LG +L
Sbjct: 211 EAQLDMQLAQEAAHAKMARDLGNELYEVDMHLEELREMVVQKCRKMSTEEKRKLGAALTR 270
Query: 314 LPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDN 364
L E+L K L IV + N G +E++LDI+A TL +L FV +
Sbjct: 271 LSPEDLTKALEIVAQNNPG---FQATAEEVDLDIDAQSETTLWRLKFFVKD 318
>gi|66912019|gb|AAH97528.1| LOC443648 protein, partial [Xenopus laevis]
Length = 572
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 143 PTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWA 199
PT K++ A P +P+ A T T +R C I+ ++ K W
Sbjct: 337 PTKKTEVPDSQLPAPPVLHPQP---APNAERDTKTSEQLRYCASIIREMFSKKHQAYAWP 393
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVDV +L L DY +IIK PMDLGT++ K+EN YK QEFA DVRL F+N YNP
Sbjct: 394 FYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRDYKEAQEFASDVRLMFSNCYKYNPP 453
Query: 260 GHYVYAMAETLSAKFEQMFQKL 281
H V MA L FE F K+
Sbjct: 454 DHEVVIMARKLQDVFEMRFAKM 475
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVDVV L L DYH IIK PMD+GT++ +LEN+ Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q ++ +++ ++ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMPQEETELTVVQSKGRGRGRK 184
>gi|49118460|gb|AAH73443.1| LOC443648 protein, partial [Xenopus laevis]
Length = 559
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 143 PTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWA 199
PT K++ A P +P+ A T T +R C I+ ++ K W
Sbjct: 337 PTKKTEVPDSQLPAPPVLHPQP---APNAERDTKTSEQLRYCASIIREMFSKKHQAYAWP 393
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVDV +L L DY +IIK PMDLGT++ K+EN YK QEFA DVRL F+N YNP
Sbjct: 394 FYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRDYKEAQEFASDVRLMFSNCYKYNPP 453
Query: 260 GHYVYAMAETLSAKFEQMFQKL 281
H V MA L FE F K+
Sbjct: 454 DHEVVIMARKLQDVFEMRFAKM 475
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVDVV L L DYH IIK PMD+GT++ +LEN+ Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q ++ +++ ++ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMPQEETELTVVQSKGRGRGRK 184
>gi|395832116|ref|XP_003789122.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Otolemur
garnettii]
Length = 680
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 343
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MD+GT++ +LEN+ Y E +D F N +YN + MA+TL F Q +
Sbjct: 1 MDMGTIKRRLENSYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 282 SKQQQ 286
+++Q
Sbjct: 61 PQEEQ 65
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 517 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 573
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 574 TLRELERYVLSCLRKKPRKPYTVKKPV 600
>gi|302813758|ref|XP_002988564.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
gi|300143671|gb|EFJ10360.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
Length = 293
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 116/238 (48%), Gaps = 67/238 (28%)
Query: 174 LTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE- 232
+ ++ +R IL ++ + K W F PVDV L+L DY+D+IK+PMD T+R K+E
Sbjct: 60 MKRAQDHLRIFSNILRQVTQHKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFRTIREKMEA 119
Query: 233 --NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ-----KLSKQQ 285
+ Y+ QE AEDVRL F+NA+ YN G VY MA+TLS KFE+ ++ KL +++
Sbjct: 120 KDGSGYRSVQEIAEDVRLVFSNAMTYNEVGTDVYVMAKTLSEKFEEKYKFVLEPKLLEER 179
Query: 286 QRQ--GILGR------------------------------------GKAREM-------- 299
+ + G L R K R+M
Sbjct: 180 KLRLIGWLTRSAKRYTSCEARVPSHLERSQLNNLEDELEEIKISATSKYRQMLDGFSSYS 239
Query: 300 --------SLEEKMALGRSLEELPQEELGKLLGIVKKRN-SGNGSLSCHGDEIELDIE 348
S+EEK LG+SL LP L +++ I+ K N S N +++ E+E+DI+
Sbjct: 240 YLRVCRPMSIEEKRQLGQSLGRLPPTGLNRVIQIIAKNNPSFNAAVA----EVEVDID 293
>gi|441594234|ref|XP_004092963.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Nomascus leucogenys]
Length = 682
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 343
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MD+GT++ +LENN Y E +D F N +YN + MA+TL F Q +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 282 SKQQQRQGI 290
+++Q +
Sbjct: 61 PQEEQELAV 69
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 519 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 575
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 576 TLRELERYVLSCLRKKPRKPYTIKKPV 602
>gi|327264790|ref|XP_003217194.1| PREDICTED: bromodomain-containing protein 4-like [Anolis
carolinensis]
Length = 1344
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C I+ ++ K W F PVDV +L L DY DIIK PMDL T++SKLEN Y+
Sbjct: 356 LKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYRDIIKHPMDLSTIKSKLENRDYR 415
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 416 DAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 459
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L+L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFSWPFQQPVDAVKLQLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAREMSLEE 303
F N +YN G + MAE L F Q ++++++ I+ GRG+ R+ ++
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIVQTKGRGRGRKETVTS 189
Query: 304 K 304
K
Sbjct: 190 K 190
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 609 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKAST 666
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 667 LRELERYVTSCLRKKRKPQAEK 688
>gi|403261526|ref|XP_003923169.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 680
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 343
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MD+GT++ +LENN Y E +D F N +YN + MA+TL F Q +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 282 SKQQQ 286
+++Q
Sbjct: 61 PQEEQ 65
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 518 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 574
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 575 LRELERYVLSCLRKKPRKPYTIKKPV 600
>gi|30694987|ref|NP_199467.2| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|327488241|sp|Q9LS28.2|GTE12_ARATH RecName: Full=Transcription factor GTE12; AltName:
Full=Bromodomain-containing protein GTE12; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E12
gi|26451383|dbj|BAC42791.1| unknown protein [Arabidopsis thaliana]
gi|332008014|gb|AED95397.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 494
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 9/142 (6%)
Query: 144 TTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTP 203
+ KS+ RGG K + K +R S +C +L LM+ + GW F P
Sbjct: 42 SEKSKKRGGPKELDEVQPKKKQRLDCDWSS---------QCLALLRFLMEHRGGWLFKEP 92
Query: 204 VDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYV 263
VD V + + DY ++I+KPMDLGTV+SKL NVY EFA DVRLTF NA+ YNP + V
Sbjct: 93 VDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNPLWNEV 152
Query: 264 YAMAETLSAKFEQMFQKLSKQQ 285
+ +A+ ++ FE ++ L K++
Sbjct: 153 HTIAKEINEIFEVRWESLMKKK 174
>gi|149732108|ref|XP_001496282.1| PREDICTED: bromodomain-containing protein 2-like [Equus caballus]
Length = 804
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 642 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 698
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 699 LRELERYVLSCLRKKPRKPYTIKKPV 724
>gi|297661253|ref|XP_002809177.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Pongo
abelii]
Length = 681
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 343
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MD+GT++ +LENN Y E +D F N +YN + MA+TL F Q +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 282 SKQQQ 286
+++Q
Sbjct: 61 PQEEQ 65
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 519 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 575
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 576 LRELERYVLSCLRKKPRKPYTIKKPV 601
>gi|410958888|ref|XP_003986045.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Felis catus]
Length = 684
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 343
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MD+GT++ +LENN Y E +D F N +YN + MA+TL F Q +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 282 SKQQQ 286
+++Q
Sbjct: 61 PQEEQ 65
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 520 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 576
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 577 TLRELERYVLSCLRKKPRKPYTIKKPV 603
>gi|426352679|ref|XP_004043837.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Gorilla
gorilla gorilla]
gi|52545711|emb|CAH56208.1| hypothetical protein [Homo sapiens]
gi|119624067|gb|EAX03662.1| bromodomain containing 2, isoform CRA_a [Homo sapiens]
Length = 681
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 343
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MD+GT++ +LENN Y E +D F N +YN + MA+TL F Q +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 282 SKQQQ 286
+++Q
Sbjct: 61 PQEEQ 65
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 518 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 574
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 575 TLRELERYVLSCLRKKPRKPYTIKKPV 601
>gi|332823728|ref|XP_001167922.2| PREDICTED: bromodomain-containing protein 2 isoform 7 [Pan
troglodytes]
Length = 680
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 230 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 289
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 290 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 343
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MD+GT++ +LENN Y E +D F N +YN + MA+TL F Q +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 282 SKQQQ 286
+++Q
Sbjct: 61 PQEEQ 65
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 517 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 573
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 574 TLRELERYVLSCLRKKPRKPYTIKKPV 600
>gi|222618950|gb|EEE55082.1| hypothetical protein OsJ_02819 [Oryza sativa Japonica Group]
Length = 264
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 162 PKAKRAAAGTXSLTS-TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
P A+ G + + +A+ RCG++L KL++ + GW F PVD +LRL DY+ I
Sbjct: 33 PAVAAASPGVAGVPADLGDALLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISD 92
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
PMDLGTVR +LE Y P FA DVRLTFNNA+ YN G VY A LS FE +
Sbjct: 93 PMDLGTVRRRLERRRYADPWAFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWPS 152
Query: 281 LSKQQQRQGILGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHG 340
+ R E K L L LP + I+KKR +G L
Sbjct: 153 VLAAPPRPP----------DAERKRRLSGLLPRLPVGAQVTVAEIMKKR---DGCLREVN 199
Query: 341 DEIELDIEALDNDTLSQLVRFV 362
+E+D++ D+ TL +L R V
Sbjct: 200 GMMEVDLDRADSATLDELDRMV 221
>gi|296197845|ref|XP_002746465.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Callithrix
jacchus]
Length = 800
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 638 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 694
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 695 LRELERYVLSCLRKKPRKPYTIKKPV 720
>gi|297791027|ref|XP_002863398.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309233|gb|EFH39657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 488
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%)
Query: 183 RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEF 242
+C +L LM+ + GW F PVD V L + DY +I+KPMDLGTV+SKL NVY EF
Sbjct: 65 QCLVLLRFLMEHRVGWLFEEPVDPVKLEIPDYFSVIRKPMDLGTVKSKLLKNVYSNADEF 124
Query: 243 AEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
A DVRLTF NA+ YNP G+ V+ +A+ + FE ++ L K+
Sbjct: 125 AADVRLTFANAMRYNPPGNEVHTIAKEIKEIFEVRWKLLKKK 166
>gi|410967748|ref|XP_003990377.1| PREDICTED: bromodomain testis-specific protein [Felis catus]
Length = 939
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V MA TL FE F K+
Sbjct: 333 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMHFAKI 376
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F PVD V L+L DY+ IIK PMDL T++ +LE+ Y E ED
Sbjct: 38 VLKALWRHNFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEHKYYMKASECIEDF 97
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
+ F+N +YN G + MA+ L F QKLS+ Q + I+G GK R
Sbjct: 98 NIMFSNCYLYNKPGDDIVLMAQALEKLFR---QKLSQMPQEEQIIG-GKER 144
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
Query: 273 KFEQMFQK-LSKQQQ----RQGILGR-----GKAREMSLEEKMALGRSLEELPQEELGKL 322
KF+QM K SK Q +Q +L A+ M+ +EK L + +LP ++LG++
Sbjct: 473 KFKQMKLKEKSKSNQPKKRKQQVLALKPEDDANAKPMNYDEKRQLSLDINKLPGDKLGRV 532
Query: 323 LGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQLVRFV 362
+ I++ R SL + + DEIE+D E L TL +L ++V
Sbjct: 533 VHIIQSREP---SLRNSNPDEIEIDFETLKASTLRELEKYV 570
>gi|403261524|ref|XP_003923168.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 800
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 638 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 694
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 695 LRELERYVLSCLRKKPRKPYTIKKPV 720
>gi|355561582|gb|EHH18214.1| hypothetical protein EGK_14770 [Macaca mulatta]
Length = 862
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 410 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 469
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 470 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 523
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LEN+ E ED+
Sbjct: 146 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENSYCWAASECMEDL 205
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 206 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 245
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 699 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 755
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 756 TLRELERYVLSCLRKKPRKPYTIKKPV 782
>gi|8885596|dbj|BAA97526.1| unnamed protein product [Arabidopsis thaliana]
Length = 506
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 9/142 (6%)
Query: 144 TTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTP 203
+ KS+ RGG K + K +R S +C +L LM+ + GW F P
Sbjct: 54 SEKSKKRGGPKELDEVQPKKKQRLDCDWSS---------QCLALLRFLMEHRGGWLFKEP 104
Query: 204 VDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYV 263
VD V + + DY ++I+KPMDLGTV+SKL NVY EFA DVRLTF NA+ YNP + V
Sbjct: 105 VDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNPLWNEV 164
Query: 264 YAMAETLSAKFEQMFQKLSKQQ 285
+ +A+ ++ FE ++ L K++
Sbjct: 165 HTIAKEINEIFEVRWESLMKKK 186
>gi|15706263|emb|CAC69989.1| bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 638 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 694
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 695 TLRELERYVLSCLRKKPRKPYTIKKPV 721
>gi|3273701|gb|AAC24810.1| female sterile homeotic-related protein Frg-1 [Mus musculus]
Length = 798
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 462
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 184
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 636 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 692
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T ++P+
Sbjct: 693 TLRELERYVLSCLRKKPRKPYTIRKPV 719
>gi|395832114|ref|XP_003789121.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Otolemur
garnettii]
Length = 791
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 341 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 400
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 401 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 454
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LEN+ Y E +D
Sbjct: 77 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENSYYWAASECMQDF 136
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 137 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 176
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 628 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 684
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 685 TLRELERYVLSCLRKKPRKPYTVKKPV 711
>gi|178057339|ref|NP_001116557.1| bromodomain-containing protein 2 [Sus scrofa]
gi|147223324|emb|CAN13285.1| bromodomain containing 2 [Sus scrofa]
Length = 803
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 640 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 696
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 697 TLRELERYVLSCLRKKPRKPYTIKKPV 723
>gi|344298832|ref|XP_003421095.1| PREDICTED: bromodomain-containing protein 2 [Loxodonta africana]
Length = 798
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 636 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 692
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 693 LRELERYVLSCLRKKPRKPYTIKKPV 718
>gi|114052340|ref|NP_001039331.1| bromodomain-containing protein 2 [Bos taurus]
gi|108935958|sp|Q32S26.1|BRD2_BOVIN RecName: Full=Bromodomain-containing protein 2
gi|63169167|gb|AAY34703.1| bromodomain containing 2 [Bos taurus]
gi|296474561|tpg|DAA16676.1| TPA: bromodomain-containing protein 2 [Bos taurus]
Length = 803
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 640 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 696
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 697 TLRELERYVLSCLRKKPRKPYTIKKPV 723
>gi|410958884|ref|XP_003986043.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Felis catus]
gi|410958886|ref|XP_003986044.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Felis catus]
Length = 804
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 640 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 696
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 697 TLRELERYVLSCLRKKPRKPYTIKKPV 723
>gi|426250128|ref|XP_004018790.1| PREDICTED: bromodomain-containing protein 2 [Ovis aries]
Length = 803
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 640 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 696
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 697 TLRELERYVLSCLRKKPRKPYTIKKPV 723
>gi|60360108|dbj|BAD90273.1| mKIAA4005 protein [Mus musculus]
Length = 818
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 369 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 428
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 429 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 482
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 105 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 164
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 165 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 204
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 656 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKLS 712
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T ++P+
Sbjct: 713 TLRELERYVLSCLRKKPRKPYTIRKPV 739
>gi|4826806|ref|NP_005095.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|164419758|ref|NP_001106653.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|426352675|ref|XP_004043835.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Gorilla
gorilla gorilla]
gi|426352677|ref|XP_004043836.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Gorilla
gorilla gorilla]
gi|12230989|sp|P25440.2|BRD2_HUMAN RecName: Full=Bromodomain-containing protein 2; AltName:
Full=O27.1.1; AltName: Full=Really interesting new gene
3 protein
gi|577293|dbj|BAA07641.1| KIAA9001 [Homo sapiens]
gi|2980663|emb|CAA43996.1| FSH [Homo sapiens]
gi|52545950|emb|CAH56171.1| hypothetical protein [Homo sapiens]
gi|119624068|gb|EAX03663.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624069|gb|EAX03664.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624071|gb|EAX03666.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|168277492|dbj|BAG10724.1| bromodomain-containing protein 2 [synthetic construct]
Length = 801
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 638 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 694
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 695 TLRELERYVLSCLRKKPRKPYTIKKPV 721
>gi|297661247|ref|XP_002809174.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pongo
abelii]
gi|297661249|ref|XP_002809175.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Pongo
abelii]
Length = 801
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 639 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 695
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 696 LRELERYVLSCLRKKPRKPYTIKKPV 721
>gi|71067345|ref|NP_034368.2| bromodomain-containing protein 2 [Mus musculus]
gi|326368244|ref|NP_001191902.1| bromodomain-containing protein 2 [Mus musculus]
gi|81894326|sp|Q7JJ13.1|BRD2_MOUSE RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Female sterile homeotic-related protein 1; AltName:
Full=Fsrg-1; AltName: Full=Protein RING3
gi|2995270|emb|CAA15819.1| MMRING3.1.2 [Mus musculus]
gi|3041763|dbj|BAA25416.1| Ring3 [Mus musculus]
gi|3811391|gb|AAC69907.1| RING3 [Mus musculus]
gi|74186521|dbj|BAE34749.1| unnamed protein product [Mus musculus]
gi|74214328|dbj|BAE40404.1| unnamed protein product [Mus musculus]
gi|123233747|emb|CAM17898.1| bromodomain containing 2 [Mus musculus]
gi|148678305|gb|EDL10252.1| bromodomain containing 2 [Mus musculus]
gi|187954015|gb|AAI38657.1| Bromodomain containing 2 [Mus musculus]
gi|223459952|gb|AAI38656.1| Bromodomain containing 2 [Mus musculus]
Length = 798
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 462
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 184
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 636 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 692
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T ++P+
Sbjct: 693 TLRELERYVLSCLRKKPRKPYTIRKPV 719
>gi|47059183|ref|NP_997660.1| bromodomain-containing protein 2 [Rattus norvegicus]
gi|392355205|ref|XP_003751971.1| PREDICTED: bromodomain-containing protein 2-like [Rattus
norvegicus]
gi|81872356|sp|Q6MGA9.1|BRD2_RAT RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Protein RING3
gi|46237556|emb|CAE83937.1| bromodomain-containing 2 [Rattus norvegicus]
gi|149043366|gb|EDL96817.1| bromodomain containing 2, isoform CRA_b [Rattus norvegicus]
Length = 798
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 462
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 184
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 636 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 692
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T ++P+
Sbjct: 693 TLRELERYVLSCLRKKPRKPYTIRKPV 719
>gi|397474356|ref|XP_003808648.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Pan paniscus]
Length = 800
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 637 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 693
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 694 TLRELERYVLSCLRKKPRKPYTIKKPV 720
>gi|380815348|gb|AFE79548.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|380815350|gb|AFE79549.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420527|gb|AFH33477.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420529|gb|AFH33478.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948624|gb|AFI37917.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948626|gb|AFI37918.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
Length = 802
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 639 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 695
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 696 TLRELERYVLSCLRKKPRKPYTIKKPV 722
>gi|114606772|ref|XP_001168005.1| PREDICTED: bromodomain-containing protein 2 isoform 10 [Pan
troglodytes]
gi|114606774|ref|XP_001168036.1| PREDICTED: bromodomain-containing protein 2 isoform 11 [Pan
troglodytes]
gi|410213772|gb|JAA04105.1| bromodomain containing 2 [Pan troglodytes]
gi|410213774|gb|JAA04106.1| bromodomain containing 2 [Pan troglodytes]
gi|410267650|gb|JAA21791.1| bromodomain containing 2 [Pan troglodytes]
gi|410267652|gb|JAA21792.1| bromodomain containing 2 [Pan troglodytes]
gi|410303978|gb|JAA30589.1| bromodomain containing 2 [Pan troglodytes]
gi|410303980|gb|JAA30590.1| bromodomain containing 2 [Pan troglodytes]
gi|410354717|gb|JAA43962.1| bromodomain containing 2 [Pan troglodytes]
gi|410354719|gb|JAA43963.1| bromodomain containing 2 [Pan troglodytes]
Length = 800
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 637 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 693
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 694 TLRELERYVLSCLRKKPRKPYTIKKPV 720
>gi|440909604|gb|ELR59493.1| Bromodomain-containing protein 2 [Bos grunniens mutus]
Length = 810
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 647 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 703
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 704 TLRELERYVLSCLRKKPRKPYTIKKPV 730
>gi|301757117|ref|XP_002914388.1| PREDICTED: bromodomain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 803
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 640 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 696
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 697 TLRELERYVLSCLRKKPRKPYTIKKPV 723
>gi|2995269|emb|CAA15818.1| MMRING3.1.1 [Mus musculus]
gi|62945214|dbj|BAD97682.1| bromodomain-containing Brd2 protein [Mus musculus]
Length = 752
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 416
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 590 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 646
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T ++P+
Sbjct: 647 TLRELERYVLSCLRKKPRKPYTIRKPV 673
>gi|1370115|emb|CAA65450.1| kinase [Homo sapiens]
Length = 754
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 416
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 592 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 648
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 649 LRELERYVLSCLRKKPRKPYTIKKPV 674
>gi|402866610|ref|XP_003897472.1| PREDICTED: bromodomain-containing protein 2 [Papio anubis]
Length = 804
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 639 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDSETLKPS 695
Query: 354 TLSQLVRFV 362
TL +L ++
Sbjct: 696 TLRKLELYM 704
>gi|351703550|gb|EHB06469.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 798
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 462
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LEN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENTYYWAASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 184
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 637 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 693
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 694 LRELERYVLSCLRKKPRKPYTIKKPV 719
>gi|109070687|ref|XP_001115845.1| PREDICTED: hypothetical protein LOC717893 isoform 7 [Macaca
mulatta]
gi|109070689|ref|XP_001115854.1| PREDICTED: hypothetical protein LOC717893 isoform 8 [Macaca
mulatta]
Length = 802
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 639 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 695
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 696 TLRELERYVLSCLRKKPRKPYTIKKPV 722
>gi|297661251|ref|XP_002809176.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Pongo
abelii]
Length = 754
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 416
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 592 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 648
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 649 LRELERYVLSCLRKKPRKPYTIKKPV 674
>gi|166851651|gb|ABY91321.1| RING3 [Sus scrofa]
Length = 756
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 416
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 594 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 650
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 651 LRELERYVLSCLRKKPRKPYTIKKPV 676
>gi|114606788|ref|XP_001167666.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pan
troglodytes]
Length = 753
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 416
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 591 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 647
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 648 LRELERYVLSCLRKKPRKPYTIKKPV 673
>gi|114326383|ref|NP_001041552.1| bromodomain-containing protein 2 [Canis lupus familiaris]
gi|62899715|sp|Q5TJG6.1|BRD2_CANFA RecName: Full=Bromodomain-containing protein 2
gi|55956582|emb|CAI11405.1| bromodomain-containing protein 2 [Canis lupus familiaris]
Length = 803
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 640 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 696
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 697 TLRELERYVLSCLRKKPRKPYTIKKPV 723
>gi|297290567|ref|XP_001115810.2| PREDICTED: hypothetical protein LOC717893 isoform 2 [Macaca
mulatta]
Length = 755
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 416
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 593 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 649
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 650 LRELERYVLSCLRKKPRKPYTIKKPV 675
>gi|52545923|emb|CAH56179.1| hypothetical protein [Homo sapiens]
Length = 754
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 416
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 592 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 648
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 649 LRELERYVLSCLRKKPRKPYTIKKPV 674
>gi|313747419|ref|NP_001186385.1| bromodomain-containing protein 2 isoform 3 [Homo sapiens]
gi|426352681|ref|XP_004043838.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Gorilla
gorilla gorilla]
gi|182769|gb|AAA68890.1| putative [Homo sapiens]
Length = 754
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 416
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 592 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 648
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 649 LRELERYVLSCLRKKPRKPYTIKKPV 674
>gi|291396003|ref|XP_002714557.1| PREDICTED: bromodomain containing 2 [Oryctolagus cuniculus]
Length = 802
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 639 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 695
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 696 TLRELERYVLSCLRKKPRKPYTIKKPV 722
>gi|431897072|gb|ELK06336.1| Bromodomain testis-specific protein, partial [Pteropus alecto]
Length = 931
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 280 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKRKMDNQEYK 339
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V AMA L FE F K+
Sbjct: 340 DAYEFAADVRLMFVNCYKYNPPDHEVVAMARMLQDVFEMHFAKI 383
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD + L+L DY+ IIKKPMDL T++ +LE+ Y E ED
Sbjct: 45 VLKALWKHSFSWPFQQPVDAMKLKLPDYYTIIKKPMDLSTIKKRLEHKYYVQASECIEDF 104
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
+ F+N +YN G + MA+ L F QKLS+ Q + ++G GK R
Sbjct: 105 NMMFSNCYLYNKTGDDIVLMAQALEKLFR---QKLSQMPQEEQVVG-GKER 151
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+ M+ +EK L + +LP ++LG+++ I++ R SL + + DEIE+D E L T
Sbjct: 511 VKPMNYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRNSNPDEIEIDFETLKATT 567
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 568 LRELEKYV 575
>gi|417404705|gb|JAA49093.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 799
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 636 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 692
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 693 TLRELERYVLSCLRKKPRKPYTIKKPV 719
>gi|297742702|emb|CBI35336.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 114/246 (46%), Gaps = 53/246 (21%)
Query: 164 AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMD 223
++R AA + + MR+ G IL ++M+ K F PVDV L L DY+++I KPMD
Sbjct: 130 SRREAAAVKRM---QELMRQFGTILRQIMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMD 186
Query: 224 LGTVRSKLE---NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
T+++++E YK +E DVRL F NA+ YN + H V+ MA+TL KFE+ + +
Sbjct: 187 FSTIKNQMEAKDGTGYKNVREICADVRLVFKNAMKYNDERHDVHVMAKTLLGKFEEKWLQ 246
Query: 281 L-----------------------SKQQQRQGILGRG---------------------KA 296
L Q+ + R K
Sbjct: 247 LLPKVAEEEKRREEEEAEAQLDMQLAQEAAHAKMAREISNELYDIDMHLEEVREMVIRKC 306
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+MS EEK LG +L L E+L K L IV + N S +E++LDI+A TL
Sbjct: 307 RKMSTEEKRKLGAALSRLSAEDLSKALEIVAQ---NNPSFQATAEEVDLDIDAQTESTLW 363
Query: 357 QLVRFV 362
+L FV
Sbjct: 364 RLKFFV 369
>gi|444519083|gb|ELV12566.1| Bromodomain-containing protein 2 [Tupaia chinensis]
Length = 743
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 290 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 349
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 350 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 403
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 89 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 148
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 149 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 188
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 581 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 637
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 638 LRELERYVLSCLRKKPRKPYTIKKPV 663
>gi|313747417|ref|NP_001186384.1| bromodomain-containing protein 2 isoform 2 [Homo sapiens]
gi|39645317|gb|AAH63840.1| BRD2 protein [Homo sapiens]
Length = 836
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 673 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 729
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 730 TLRELERYVLSCLRKKPRKPYTIKKPV 756
>gi|359486529|ref|XP_002276963.2| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 440
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 112/246 (45%), Gaps = 53/246 (21%)
Query: 164 AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMD 223
++R AA + + MR+ G IL ++ + K W F PVDV L L DY+++I+KPMD
Sbjct: 144 SRREAAAAKRM---QELMRQFGTILRQITQHKWAWPFMQPVDVEGLGLHDYYEVIEKPMD 200
Query: 224 LGTVRSKLENN---VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
T+++K+E YK +E DVRL F NA+ YN + V+ MA+TL KFE+ + +
Sbjct: 201 FSTIKNKMEAKDGAGYKNVREICADVRLVFKNAMKYNDERRDVHVMAKTLLGKFEEKWLQ 260
Query: 281 L-----------------------SKQQQRQGILGRG---------------------KA 296
L Q+ + R K
Sbjct: 261 LLPKVAEEDKRREEEEAEAQLDMHLAQEAAHAKMARDISNELFEIDMHLDDIREIIVQKC 320
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+ S EEK LG +L L E+L K L IV + N S +E+ LDI+A TL
Sbjct: 321 RKTSTEEKRKLGAALSRLSAEDLSKALEIVAQ---SNPSFQATAEEVHLDIDAQRESTLW 377
Query: 357 QLVRFV 362
+L FV
Sbjct: 378 RLKFFV 383
>gi|351697075|gb|EHA99993.1| Bromodomain testis-specific protein [Heterocephalus glaber]
Length = 832
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL +++ K W F++PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 226 LKHCNEILKEMLSKKHFSYAWPFHSPVDVNALGLHNYYDIVKNPMDLGTIKKKMDNQEYK 285
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLS 282
EFA DVRL F N YN H + AMA+TL FE F K+S
Sbjct: 286 DAYEFAADVRLMFMNCYKYNSPDHDIVAMAKTLQDVFEVHFAKIS 330
>gi|348576418|ref|XP_003473984.1| PREDICTED: bromodomain-containing protein 2 [Cavia porcellus]
Length = 802
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 462
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LEN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENTYYWAASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 184
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 640 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 696
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 697 LRELERYVLSCLRKKPRKPYTIKKPV 722
>gi|395822025|ref|XP_003784325.1| PREDICTED: bromodomain testis-specific protein [Otolemur garnettii]
Length = 928
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 276 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKHPMDLGTIKGKMDNQEYK 335
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V MA+ L FE F K+
Sbjct: 336 DAYEFAADVRLMFMNCYKYNPPDHEVVTMAKMLQDVFEMHFAKI 379
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED+
Sbjct: 38 VLKALWKHSFSWPFQHPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDL 97
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
F+N +YN G + MA+ L F QKLS+ Q + ++G GK R
Sbjct: 98 NTMFSNCYLYNKPGDDIVLMAQALEKLF---IQKLSQMPQEEQVVG-GKER 144
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ M+ +EK L + +LP ++LG+++ I++ R SL + + DEIE+D E L T
Sbjct: 510 AKPMNYDEKRQLSLDINKLPGDKLGRVVRIIQSREP---SLRNSNPDEIEIDFETLKAST 566
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 567 LRELEKYV 574
>gi|431916886|gb|ELK16646.1| Bromodomain-containing protein 2 [Pteropus alecto]
Length = 833
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 381 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 440
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 441 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 494
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 117 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 176
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 177 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 216
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
+R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 671 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPST 727
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEPM 378
L +L R+V + KK K T K+P+
Sbjct: 728 LRELERYVLSCLRKKPRKPYTIKKPV 753
>gi|296086052|emb|CBI31493.3| unnamed protein product [Vitis vinifera]
Length = 362
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 115/258 (44%), Gaps = 53/258 (20%)
Query: 152 GSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRL 211
SK+ ++R AA + + MR+ G IL ++ + K W F PVDV L L
Sbjct: 54 ASKKQLNVSKDASRREAAAAKRM---QELMRQFGTILRQITQHKWAWPFMQPVDVEGLGL 110
Query: 212 RDYHDIIKKPMDLGTVRSKLENN---VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAE 268
DY+++I+KPMD T+++K+E YK +E DVRL F NA+ YN + V+ MA+
Sbjct: 111 HDYYEVIEKPMDFSTIKNKMEAKDGAGYKNVREICADVRLVFKNAMKYNDERRDVHVMAK 170
Query: 269 TLSAKFEQMFQKL-----------------------SKQQQRQGILGRG----------- 294
TL KFE+ + +L Q+ + R
Sbjct: 171 TLLGKFEEKWLQLLPKVAEEDKRREEEEAEAQLDMHLAQEAAHAKMARDISNELFEIDMH 230
Query: 295 ----------KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIE 344
K R+ S EEK LG +L L E+L K L IV + N S +E+
Sbjct: 231 LDDIREIIVQKCRKTSTEEKRKLGAALSRLSAEDLSKALEIVAQ---SNPSFQATAEEVH 287
Query: 345 LDIEALDNDTLSQLVRFV 362
LDI+A TL +L FV
Sbjct: 288 LDIDAQRESTLWRLKFFV 305
>gi|348538983|ref|XP_003456969.1| PREDICTED: hypothetical protein LOC100693386 [Oreochromis
niloticus]
Length = 1432
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C ++ +++ K W F PVD +L L DYH+IIK PMDL T++ KL+N Y+
Sbjct: 435 LRWCARLVREMLSKKHVAYAWPFYKPVDAKALGLHDYHEIIKHPMDLSTIKKKLDNRQYR 494
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 495 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEMRFAKM 538
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD + L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 89 VLKTLWKHNFAWPFQAPVDAIKLNLPDYYKIIKSPMDMGTIKKRLENNYYWNAQECIQDF 148
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F N +YN G + MAE L F Q ++ +++ ++ +G+
Sbjct: 149 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKITEMPQEETEIAVVTKGR 197
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
+ + MS EEK L + +LP ++LG+++ I++ R + + DEIE+D E L T
Sbjct: 702 RCKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLK--NSNPDEIEIDFETLKPST 759
Query: 355 LSQLVRFVDNFKKAEK 370
L +L ++V + + +K
Sbjct: 760 LRELEKYVSSCLRKKK 775
>gi|410919159|ref|XP_003973052.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 590
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C +L +++ + W F +PVDVV+L L DYHDIIK+PMDL T+R K++ Y
Sbjct: 271 ALKCCSGVLKEMLSKRHYACAWPFYSPVDVVALGLHDYHDIIKQPMDLSTIRKKMDQGEY 330
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
P EFA DVRL F+N YNP H V MA L FE + K+ ++
Sbjct: 331 AQPAEFAADVRLMFSNCYKYNPPSHEVVHMARKLQEVFEARYVKVPQE 378
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + W F PVD V+L L DY+ +I PMDL T+ +L+N Y E +D+
Sbjct: 62 VIKALWRHHFSWPFQRPVDAVALGLPDYYTVITNPMDLSTIMMRLKNKYYWQALECIQDL 121
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMA 306
F+N VYN G + MA+TL ++ + K + K R+MS
Sbjct: 122 NTMFSNCYVYNQPGDGIVFMAQTLEKLCQEKLTLMPKPE------CEAKGRKMS------ 169
Query: 307 LGRSLEELPQEELGKLLGIVKKRN 330
E++ Q LG++ +K+R+
Sbjct: 170 -----EDIEQHVLGQMPSAIKQRS 188
>gi|395533918|ref|XP_003768996.1| PREDICTED: bromodomain-containing protein 2-like [Sarcophilus
harrisii]
Length = 800
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 351 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 410
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 411 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 464
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWLASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + ++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVALMPSEEQ 185
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 639 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 695
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 696 TLRELERYVLSCLRKKPRKPYTIKKPV 722
>gi|357627183|gb|EHJ76955.1| putative bromodomain containing 3 [Danaus plexippus]
Length = 1323
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DY DIIKKPMDLGTV+ +++
Sbjct: 380 DALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKHNMDHRA 439
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
YK EFA DVRL F N YNP H V AMA L FE + K+
Sbjct: 440 YKTAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 485
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 57/100 (57%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K K W F+ PVD L L DYH IIKKPMDLGT++ +LE+N Y QE +D
Sbjct: 71 VIKAVWKHKFAWPFHQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLESNYYYSAQECIQDF 130
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N VYN G V MA+TL F ++ K+++
Sbjct: 131 NTMFTNCYVYNKPGEDVVVMAQTLEKLFLNRIAQMDKEEK 170
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LGK++ I++ R SL + DEIE+D E L T
Sbjct: 661 AKPMSYDEKRQLSLDINKLPGDKLGKVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 717
Query: 355 LSQLVRFV 362
L QL +V
Sbjct: 718 LRQLESYV 725
>gi|432094627|gb|ELK26133.1| Bromodomain-containing protein 2 [Myotis davidii]
Length = 881
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 434 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 493
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 494 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 547
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 170 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 229
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 230 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 269
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 718 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 774
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 775 TLRELERYVLSCLRKKPRKPYTIKKPV 801
>gi|74190894|dbj|BAE28228.1| unnamed protein product [Mus musculus]
Length = 473
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 462
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLKKIFLQKVASMPQEEQ 184
>gi|12802525|gb|AAK07919.1|AF318183_1 ring 3 [Mus musculus]
Length = 503
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 462
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 184
>gi|67972378|dbj|BAE02531.1| unnamed protein product [Macaca fascicularis]
Length = 776
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 416
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 592 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 648
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 649 TLRELERYVLSCLRKKPRKPYTIKKPV 675
>gi|123233748|emb|CAM17899.1| bromodomain containing 2 [Mus musculus]
Length = 473
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 462
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 184
>gi|55725298|emb|CAH89514.1| hypothetical protein [Pongo abelii]
Length = 546
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
>gi|2780775|dbj|BAA24377.1| Ring3 [Mus musculus]
Length = 549
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 349 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 408
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 409 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 462
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 184
>gi|133777453|gb|AAI14644.1| BRD2 protein [Bos taurus]
Length = 558
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 350 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 409
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 410 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 463
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 185
>gi|126309678|ref|XP_001369391.1| PREDICTED: bromodomain-containing protein 2-like [Monodelphis
domestica]
Length = 801
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 351 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 410
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 411 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 464
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWLASECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + ++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVALMPSEEQ 185
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 640 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 696
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 697 TLRELERYVLSCLRKKPRKPYTIKKPV 723
>gi|2780777|dbj|BAA24378.1| Ring3 [Mus musculus]
gi|2780779|dbj|BAA24379.1| Ring3 [Mus musculus]
Length = 503
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 416
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
>gi|363747028|ref|XP_003643891.1| PREDICTED: bromodomain-containing protein 4-like [Gallus gallus]
Length = 1354
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C I+ ++ K W F PVDV +L L DY DIIK PMDL T++SKLEN Y+
Sbjct: 369 LKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYR 428
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 429 DAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKM 472
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 88 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 147
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAREMSLEE 303
F N +YN G + MAE L F Q ++++++ I GRG+AR+ ++
Sbjct: 148 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTS 207
Query: 304 K 304
K
Sbjct: 208 K 208
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 622 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 679
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 680 LRELERYVTSCLRKKRKPQAEK 701
>gi|359484096|ref|XP_003633062.1| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 377
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 114/246 (46%), Gaps = 53/246 (21%)
Query: 164 AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMD 223
++R AA + + MR+ G IL ++M+ K F PVDV L L DY+++I KPMD
Sbjct: 86 SRREAAAVKRM---QELMRQFGTILRQIMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMD 142
Query: 224 LGTVRSKLE---NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
T+++++E YK +E DVRL F NA+ YN + H V+ MA+TL KFE+ + +
Sbjct: 143 FSTIKNQMEAKDGTGYKNVREICADVRLVFKNAMKYNDERHDVHVMAKTLLGKFEEKWLQ 202
Query: 281 L-----------------------SKQQQRQGILGRG---------------------KA 296
L Q+ + R K
Sbjct: 203 LLPKVAEEEKRREEEEAEAQLDMQLAQEAAHAKMAREISNELYDIDMHLEEVREMVIRKC 262
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+MS EEK LG +L L E+L K L IV + N S +E++LDI+A TL
Sbjct: 263 RKMSTEEKRKLGAALSRLSAEDLSKALEIVAQ---NNPSFQATAEEVDLDIDAQTESTLW 319
Query: 357 QLVRFV 362
+L FV
Sbjct: 320 RLKFFV 325
>gi|195060207|ref|XP_001995768.1| GH17935 [Drosophila grimshawi]
gi|193896554|gb|EDV95420.1| GH17935 [Drosophila grimshawi]
Length = 1220
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
++++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 513 DSLKSCNEILKELFSKKHSGCAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE 572
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+K EFA DVRL F N YNP H V AM L FE + +
Sbjct: 573 FKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 618
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K W F PVD L L DYH IIK+PMDLGT++ +LENN Y +E D+
Sbjct: 46 VMKFLWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWSAKEAVNDI 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA L + Q + + K++
Sbjct: 106 NTMFTNCSVYNKPGEDVVVMAHALEKVYLQKIEGMPKEE 144
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 988 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREP---SLRDSNPDEIEIDFETLKPST 1044
Query: 355 LSQLVRFVDNFKKAEKDKTEKEP 377
L +L +V + + KT K+P
Sbjct: 1045 LRELESYVAS---CLRKKTHKKP 1064
>gi|334321601|ref|XP_001377106.2| PREDICTED: bromodomain testis-specific protein [Monodelphis
domestica]
Length = 1066
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL ++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 274 LKYCNEILKEMFAKKHLAYAWPFYKPVDVTALGLHNYYDVVKSPMDLGTIKKKMDNQEYK 333
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V MA TL FE F K+
Sbjct: 334 DAHEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMQFAKI 377
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F PVD L+L DY+ IIKKPMDL T++ +LE+ Y E ED+
Sbjct: 38 VLKALWRHSFSWPFQQPVDAAKLKLPDYYSIIKKPMDLSTIKKRLEHKYYVKSSECVEDL 97
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKARE 298
+ F N +YN G + MA+ L F QK+S+ + ++G GK R+
Sbjct: 98 KTMFTNCYLYNKPGDDIVLMAQALEKLF---MQKMSQMPSEEQVIG-GKERK 145
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
A+ M+ +EK L + +LP ++LG+++ I++ R + + DEIE+D E L TL
Sbjct: 510 AKPMNYDEKRQLSLDINKLPGDKLGRVVHIIESREPSLR--NSNPDEIEIDFETLKASTL 567
Query: 356 SQLVRFV 362
+L ++V
Sbjct: 568 RELEKYV 574
>gi|432855679|ref|XP_004068304.1| PREDICTED: bromodomain testis-specific protein-like [Oryzias
latipes]
Length = 969
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ + W F TPVD ++L L+DYHDIIK+PMDL T++ K+++ Y
Sbjct: 259 LRDCNNILKEMLSKRHCAYAWPFYTPVDAIALGLQDYHDIIKQPMDLSTIKKKMDHQEYT 318
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
EFA DVRL F+N YNP H V MA L FE + K+S++
Sbjct: 319 NATEFAADVRLMFSNCYRYNPPSHGVVYMARKLQEVFEARYMKMSQE 365
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + + W F PVD V+L + DY+ +IK PMDLGTV +L+N Y E +D+
Sbjct: 40 VIKALWRHQYSWPFRQPVDAVALCIPDYYKLIKHPMDLGTVMQRLKNRYYWEANECIKDI 99
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G + MA+TL F Q ++ K++
Sbjct: 100 STMFNNCYVYNRPGDDIVFMAQTLEKIFLQKVSQMPKEE 138
>gi|147779795|emb|CAN62295.1| hypothetical protein VITISV_019973 [Vitis vinifera]
Length = 377
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 114/246 (46%), Gaps = 53/246 (21%)
Query: 164 AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMD 223
++R AA + + MR+ G IL ++M+ K F PVDV L L DY+++I KPMD
Sbjct: 86 SRREAAAAKRM---QELMRQFGTILRQIMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMD 142
Query: 224 LGTVRSKLE---NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
T+++++E YK +E DVRL F NA+ YN + H V+ MA+TL KFE+ + +
Sbjct: 143 FSTIKNQMEAKDGTGYKNVREICADVRLVFKNAMKYNDERHDVHVMAKTLLGKFEEKWLQ 202
Query: 281 L-----------------------SKQQQRQGILGRG---------------------KA 296
L Q+ + R K
Sbjct: 203 LLPKVAEEEKRREEEEAEAQLDMQLAQEAAHAKMAREISNELYXIDMHLEEVREMVIRKC 262
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+MS EEK LG +L L E+L K L IV + N S +E++LDI+A TL
Sbjct: 263 RKMSTEEKRKLGAALSRLSAEDLSKALEIVAQ---NNPSFQATAEEVDLDIDAQTESTLW 319
Query: 357 QLVRFV 362
+L FV
Sbjct: 320 RLKFFV 325
>gi|413925460|gb|AFW65392.1| hypothetical protein ZEAMMB73_923875 [Zea mays]
Length = 613
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 76/121 (62%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+R CG I+ KL+ K GW F PVD ++ DY D+I+ PMDLGTV++KL Y +
Sbjct: 63 IRLCGNIVRKLIDHKGGWLFKDPVDPDLYKIPDYFDVIRNPMDLGTVKNKLTKKKYVSIE 122
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMS 300
EFA DVRLTF+NA+ YNP G+ V+A A L+ F+ ++ + ++ + + ++ K + +
Sbjct: 123 EFAADVRLTFSNAMKYNPPGNDVHAFARELNEIFDSEWESVERKFRGRNLVQEQKTKAIK 182
Query: 301 L 301
+
Sbjct: 183 V 183
>gi|302794995|ref|XP_002979261.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
gi|300153029|gb|EFJ19669.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
Length = 700
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 25/209 (11%)
Query: 82 KTPTPAQPQSLPESDYVTFNLGAYTRR---ELKDLRKRLVSDLERVR--NLGSR---IAN 133
++ P Q+ P+ D NL +++D+ +R VSD+ R+R +L R I
Sbjct: 83 RSRVPGSQQASPDKDEFKRNLKVQVTEMNSKVEDM-ERQVSDILRMRRASLKDRPVGITV 141
Query: 134 SDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMK 193
+D A K Q A+R A T ++ +R IL ++ +
Sbjct: 142 TDDDREKAVAAIKKQR----------ALENARREALHTKR---AQDHLRIFSNILRQVTQ 188
Query: 194 DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NNVYKCPQEFAEDVRLTF 250
K W F PVDV L+L DY+D+IK+PMD T+R K+E + Y+ QE AEDVRL F
Sbjct: 189 HKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFRTIREKMEAKDGSGYRSVQEIAEDVRLVF 248
Query: 251 NNALVYNPKGHYVYAMAETLSAKFEQMFQ 279
+NA+ YN G VY MA+TLS KFE+ ++
Sbjct: 249 SNAMTYNEVGTDVYVMAKTLSEKFEEKYK 277
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRN-SGNGSLSCHGDEIELDIEALDNDT 354
R MS+EEK LG+SL LP L +++ I+ K N S N +++ E+E+DI+ALD T
Sbjct: 359 CRPMSIEEKRQLGQSLGRLPPTGLNRVIQIIAKNNPSFNAAVA----EVEVDIDALDTGT 414
Query: 355 LSQLVRFVDNFKKAEKDKTE 374
L QL +V K + E
Sbjct: 415 LWQLHCYVQMVLSQNKQQVE 434
>gi|427785339|gb|JAA58121.1| Putative bromodomain-containing protein 4 [Rhipicephalus
pulchellus]
Length = 1295
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 61/121 (50%), Gaps = 20/121 (16%)
Query: 181 MRRCGEILTKLMKDKQG--------------------WAFNTPVDVVSLRLRDYHDIIKK 220
M+ C IL +L K W F PVD L L DYH+IIK
Sbjct: 365 MKYCNSILKELFAKKHAGPSLNARRPRRAQQPRPGYAWPFYKPVDAELLGLHDYHEIIKH 424
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
PMDLGTV+ K++N YK P+EFA DVRL F N YNP H V AMA L FE + K
Sbjct: 425 PMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRYAK 484
Query: 281 L 281
+
Sbjct: 485 M 485
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 158 PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLM-KDKQGWAFNTPVDVVSLRLRDYHD 216
PF P ++R T N ++ +++ K M K + W F PVD V L L DYH
Sbjct: 48 PFVPPASRR--------QRTTNQLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHR 99
Query: 217 IIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
II+ PMDLGT++ +LE+ Y QE ED + F N VYN G V MA+ L F
Sbjct: 100 IIRHPMDLGTIKKRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLT 159
Query: 277 MFQKLSKQQ 285
++ K++
Sbjct: 160 KITEMPKEE 168
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 685 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 741
Query: 355 LSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAA 388
L +L +V + + K ++P S+ +A A
Sbjct: 742 LRELESYVASCLR----KKPRKPYSSKSKLAATA 771
>gi|355673420|gb|AER95166.1| bromodomain containing 2 [Mustela putorius furo]
Length = 613
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV K+EN Y+
Sbjct: 358 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVXRKMENRDYR 417
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V AMA L FE + K+ + G L
Sbjct: 418 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPL 471
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 94 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 153
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 154 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 193
>gi|345326866|ref|XP_001506320.2| PREDICTED: bromodomain-containing protein 4 [Ornithorhynchus
anatinus]
Length = 719
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C I+ ++ K W F PVDV +L L DY DIIK PMDL T++SKLEN Y+
Sbjct: 352 LKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYR 411
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 412 DAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 455
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT+R +LENN Y E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIRKRLENNYYWNAHECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAREMSLEE 303
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+ ++
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISELPSEETEIVIVQAKGRGRGRKEAVTA 189
Query: 304 K 304
K
Sbjct: 190 K 190
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 662
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 663 LRELERYVTSCLRKKRKPQAEK 684
>gi|73959570|ref|XP_867048.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Canis
lupus familiaris]
Length = 668
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHLSYAWPFYNPVDVHALGLHNYYDIVKNPMDLGTIKGKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 376
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LE+ Y E ED
Sbjct: 38 VLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEHKYYVRASECIEDF 97
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
+ F+N +YN G + MA+ L F QKLS+ Q + I+G GK R
Sbjct: 98 NIMFSNCYLYNKPGDDIVLMAQALEKLFR---QKLSQMPQEEQIVG-GKER 144
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ M+ +EK L + +LP ++LG+++ I++ R SL + + DEIE+D E L T
Sbjct: 506 AKPMNYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRNSNPDEIEIDFETLKAST 562
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 563 LRELEKYV 570
>gi|321456065|gb|EFX67182.1| hypothetical protein DAPPUDRAFT_302185 [Daphnia pulex]
Length = 754
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 178 KNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENN 234
+ + + C EIL +L K W F PVD L L DYHDIIKKPMDLGTV++K++
Sbjct: 350 RESTKACNEILKELFSKKHSGYAWPFYKPVDAGLLGLHDYHDIIKKPMDLGTVKAKMDGR 409
Query: 235 VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Y+ EFA DVR+ F N YNP H V AMA L FE + K+
Sbjct: 410 EYRSAAEFASDVRMIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 456
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F+ PVD L L DY IIK PMDLGTV+ +LENN Y +E +D
Sbjct: 88 VMKAVWKHSFAWPFHQPVDAKKLGLPDYFKIIKYPMDLGTVKKRLENNYYWSAKECIQDF 147
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
F N VYN G V MA+TL F
Sbjct: 148 NTMFTNCYVYNKPGEDVVLMAQTLEKLF 175
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 591 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 647
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 648 LRELESYV 655
>gi|354487577|ref|XP_003505948.1| PREDICTED: bromodomain-containing protein 2-like [Cricetulus
griseus]
gi|344253000|gb|EGW09104.1| Bromodomain-containing protein 2 [Cricetulus griseus]
Length = 752
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 303 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 362
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
QEFA DVRL F+N YNP H V MA L FE + K+ + G L
Sbjct: 363 DAQEFAADVRLMFSNCYKYNPPDHDVVVMARKLQDVFEFRYAKMPDEPLEPGPL 416
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 138
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 589 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDSNPEEIEIDFETLKPS 645
Query: 354 TLSQLVRFVDNF--KKAEKDKTEKEPM 378
TL +L R+V + KK K T K+P+
Sbjct: 646 TLRELERYVLSCLRKKPRKPYTIKKPV 672
>gi|326492620|dbj|BAJ90166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 16/129 (12%)
Query: 160 GNPKAKRAAAGTXSLTSTKN--------------AMRRCGEILTKLMKDKQGWAFNTPVD 205
GN +++++ GT S++S++N R C IL KLM GW F+ PVD
Sbjct: 48 GNKRSQKS--GTTSISSSENRPSSNNKAGSMNASKTRVCRNILGKLMDHPGGWLFHKPVD 105
Query: 206 VVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYA 265
+ DY D+I+ PMDLGTV+ KL N Y +FA DVRLTF+NA+ YNP G+ V+
Sbjct: 106 PDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGNQVHT 165
Query: 266 MAETLSAKF 274
+AE L+ F
Sbjct: 166 VAEQLNIMF 174
>gi|326936210|ref|XP_003214150.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Meleagris gallopavo]
Length = 697
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C I+ ++ K W F PVDV +L L DY DIIK PMDL T++SKLEN Y+
Sbjct: 277 LKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYR 336
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 337 DAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKM 380
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAREMSLEE 303
F N +YN G + MAE L F Q ++++++ I GRG+AR+ E
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARK---EA 186
Query: 304 KMALGRSL 311
MAL +
Sbjct: 187 GMALSHII 194
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 530 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 587
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 588 LRELERYVTSCLRKKRKPQAEK 609
>gi|440906896|gb|ELR57110.1| Bromodomain testis-specific protein [Bos grunniens mutus]
Length = 964
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT+++K++N YK
Sbjct: 272 LRHCSEILKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMDNQEYK 331
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V MA L FE F K+
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LE+ Y E ED
Sbjct: 38 VLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEHKYYVKASECIEDF 97
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR-EMSLEEKM 305
F+N +YN G + MA+ L F QKLS+ Q + ++G GK R + ++ M
Sbjct: 98 NTMFSNCYLYNKPGDDIVLMAQALEKLFR---QKLSQMPQEEQVVG-GKERIKKGTQQNM 153
Query: 306 ALGRSLEELPQEELGKLL 323
+ ++ P+ LGKLL
Sbjct: 154 TVSIKGKQSPK-ALGKLL 170
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ M+ +EK L + +LP ++LG+++ I++ R SL + + DEIE+D E L + T
Sbjct: 506 AKPMNYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRNSNPDEIEIDFETLKSST 562
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 563 LRELQKYV 570
>gi|120431736|ref|NP_473395.2| bromodomain testis-specific protein isoform A [Mus musculus]
gi|425906068|sp|Q91Y44.3|BRDT_MOUSE RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Bromodomain-containing female sterile homeotic-like
protein; AltName: Full=RING3-like protein
gi|148688221|gb|EDL20168.1| bromodomain, testis-specific [Mus musculus]
Length = 956
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL +++ K W F PVD +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYK 331
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V AMA TL FE F K+
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKI 375
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 174 LTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN 233
LT+ ++R +L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN
Sbjct: 27 LTNQLQFLQRV--VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEN 84
Query: 234 NVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGR 293
Y+ E ED F+N +YN G + MA+ L F QKLS+ Q + ++G
Sbjct: 85 KYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLF---MQKLSQMPQEEQVVG- 140
Query: 294 GKAR-EMSLEEKMALGRSLEELP 315
GK R + +++K+A+ + E++P
Sbjct: 141 GKERIKKDIQQKIAVSSAKEQIP 163
>gi|417404059|gb|JAA48805.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 707
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 294 LRHCDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 353
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 354 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 397
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LEN+ Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPK 259
F N +YN K
Sbjct: 106 NTMFTNCYIYNKK 118
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 554 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 610
Query: 358 LVRFV 362
L R+V
Sbjct: 611 LERYV 615
>gi|13957951|gb|AAK50736.1| bromodomain-containing female sterile homeotic-like protein [Mus
musculus]
Length = 956
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL +++ K W F PVD +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYK 331
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V AMA TL FE F K+
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKI 375
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 174 LTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN 233
LT+ ++R +L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN
Sbjct: 27 LTNQLQFLQRV--VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEN 84
Query: 234 NVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGR 293
Y+ E ED F+N +YN G + MA+ L F QKLS+ Q + ++G
Sbjct: 85 KYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLF---MQKLSQMPQEEQVVG- 140
Query: 294 GKAR-EMSLEEKMALGRSLEELP 315
GK R + +++K+A+ + E++P
Sbjct: 141 GKERIKKDIQQKIAVSSAKEQIP 163
>gi|325193402|emb|CCA27731.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 2004
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 169 AGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVR 228
G SLT KN R +LTKLM+ + GWAFN+PVD V + DY DIIK PMDLG ++
Sbjct: 717 CGYISLTELKN---RLMPLLTKLMESEHGWAFNSPVDPVQWNIPDYFDIIKCPMDLGAIK 773
Query: 229 SKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
+LEN Y FA DVRL F N + YN + A+ L +FE+ + Q +RQ
Sbjct: 774 KRLENEHYNSVDAFAADVRLVFENCIAYNSSTNKFNIAAKQLLTQFEKNLTSIKSQLERQ 833
>gi|291398522|ref|XP_002715912.1| PREDICTED: Bromodomain testis-specific protein-like [Oryctolagus
cuniculus]
Length = 953
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++++ YK
Sbjct: 270 LRHCSEILKEMLAKKHLPYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDSHQYK 329
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V MA TL FE F ++
Sbjct: 330 DACEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMHFARI 373
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 38 VLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKSPMDLNTIKKRLENKYYVKASECIEDF 97
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
F+N +YN G + MA+TL F QKLS+ Q + ++G GK R
Sbjct: 98 NTMFSNCYLYNKPGDDIVLMAQTLEKLF---MQKLSQMPQEEQVVG-GKER 144
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 14/101 (13%)
Query: 273 KFEQMFQKLS-------KQQQRQGIL---GRGKAREMSLEEKMALGRSLEELPQEELGKL 322
KF+QM K + K+ Q+ ++ G ++ M+ +EK L + +LP ++LG++
Sbjct: 471 KFKQMKPKETSKSNQPKKRNQQVSVVKSEDEGNSKPMNYDEKRQLSLDINKLPGDKLGRV 530
Query: 323 LGIVKKRNSGNGSLS-CHGDEIELDIEALDNDTLSQLVRFV 362
+ I++ R SLS + DEIE+D E L TL +L ++V
Sbjct: 531 VHIIQSREP---SLSDSNPDEIEIDFETLKASTLRELEKYV 568
>gi|417404197|gb|JAA48868.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 725
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRHCDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LEN+ Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|345311855|ref|XP_001520339.2| PREDICTED: bromodomain testis-specific protein-like, partial
[Ornithorhynchus anatinus]
Length = 431
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL +L K W F PVDV +L L +Y+D++K PMDLGT++ K+ N YK
Sbjct: 278 LKHCNEILKELFSKKHLSYAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMNNQNYK 337
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H + MA TL FE F K+
Sbjct: 338 DAHEFAADVRLMFMNCYKYNPPDHEIVGMARTLQDVFEMQFAKI 381
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD V LRL DY+ IIK PMDL T++ +LE Y E ED
Sbjct: 37 VIKAIWKHSFSWPFQQPVDAVKLRLPDYYRIIKNPMDLSTIKKRLEYKYYVKASECVEDF 96
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F N +YN G + MA+ L F QK+++ Q + ++GR K
Sbjct: 97 NTMFTNCYLYNKPGDDIVLMAQALEKVF---LQKVAQMPQEEEVIGRSK 142
>gi|47210026|emb|CAF90901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1594
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C ++ +++ K W F PVDV SL L DY+DIIK PMDL T++ K+++ Y+
Sbjct: 745 LRFCARLVREMLSRKHASYAWPFYKPVDVTSLGLHDYYDIIKHPMDLSTIKKKMDSRQYR 804
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V +MA L FE F K+
Sbjct: 805 DAQEFAADVRLMFSNCYKYNPPDHDVVSMARNLQDVFEMRFAKM 848
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%)
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAED 245
E+L L K W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE D
Sbjct: 466 EVLKSLWKHHFAWPFQAPVDAVKLNLPDYYKIIKTPMDMGTIKRRLENNYYWNAQECIHD 525
Query: 246 VRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F N +YN G + MAE L F Q ++ ++++ ++ +G+
Sbjct: 526 FNTMFTNCYIYNKPGDDIVLMAEALEKVFLQKITEMPQEEKEIAVVPKGR 575
>gi|357517357|ref|XP_003628967.1| Global transcription factor group [Medicago truncatula]
gi|355522989|gb|AET03443.1| Global transcription factor group [Medicago truncatula]
Length = 365
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 107/229 (46%), Gaps = 50/229 (21%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NNVYK 237
MR+ IL ++ + K W F PVDV L L DY++II KPMD GT+++K+E YK
Sbjct: 94 MRQFSTILRQITQHKWAWPFLEPVDVEGLGLHDYYEIIDKPMDFGTIKNKMEAKDGTGYK 153
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE---------------------- 275
+E DVRL F NA+ YN + H V+ MA+TL KFE
Sbjct: 154 NVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLMEKFEDKWLLLLPKVAEEEKRQIEEEA 213
Query: 276 ---------------QMFQKLSKQQQRQGIL---GRGKA----REMSLEEKMALGRSLEE 313
M + LS + GI R K R++S EK ALG+++ +
Sbjct: 214 QVQMDIHLAQETTYADMAKDLSNELNEVGIRLMEFREKVIQNCRKLSTGEKKALGKAIAK 273
Query: 314 LPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
L E L + L +V + N S DE+ LDI A + T+ +L FV
Sbjct: 274 LSPENLQRALDLVAEINP---SFESTADEVVLDINAQSDYTVWRLYHFV 319
>gi|426218805|ref|XP_004003627.1| PREDICTED: bromodomain testis-specific protein [Ovis aries]
Length = 969
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT+++K++N YK
Sbjct: 307 LRHCSEILKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMDNQEYK 366
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V MA L FE F K+
Sbjct: 367 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEVHFAKI 410
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LE+ Y E ED
Sbjct: 73 VLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEHKYYVKASECIEDF 132
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMA 306
F+N +YN G + MA+ L F QKLS+ Q + ++G + + ++ M
Sbjct: 133 NTMFSNCYLYNKPGDDIVLMAQALEKLFR---QKLSQMPQEEQVVGGKERIKKGTQQNMT 189
Query: 307 LGRSLEELPQEELGKLL 323
+ ++ P+ LGKLL
Sbjct: 190 VSIKGKQSPK-ALGKLL 205
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
A+ M+ +EK L + +LP ++LG+++ I++ R + S DEIE+D E L + TL
Sbjct: 541 AKPMNYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRNSS--PDEIEIDFETLKSSTL 598
Query: 356 SQLVRFV 362
+L ++V
Sbjct: 599 RELQKYV 605
>gi|42571057|ref|NP_973602.1| Transcription factor GTE6 [Arabidopsis thaliana]
gi|330253942|gb|AEC09036.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 276
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 110/232 (47%), Gaps = 47/232 (20%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
MR+ + ++ + K W F PVDV L L DY+ +I+KPMDLGT++ K+E++ Y +
Sbjct: 1 MRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVR 60
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ----MFQKLSKQQQR--------- 287
E DVRL F NA+ YN + VY MAE+L KFE+ + KL +++++
Sbjct: 61 EIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKH 120
Query: 288 ----------QGILGRG---------------------KAREMSLEEKMALGRSLEELPQ 316
Q + R + R++S +EK L +L L
Sbjct: 121 ANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLSP 180
Query: 317 EELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKA 368
E+L K L +V + N S E+ELDI+ + TL +L FV KA
Sbjct: 181 EDLSKALKMV---SESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKA 229
>gi|410926019|ref|XP_003976476.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 820
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L +L+ K W F PVD SL L DYHDIIK+PMDL T++ K++N Y
Sbjct: 391 LRYCNGVLKELLSKKHAGYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNREYL 450
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 451 DSQQFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFCFAKM 494
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F+ PVD V L L DYH IIK PMD+GT++ +LENN Y+ E +D
Sbjct: 88 LLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 147
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA++L F QK+++ Q
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAF---LQKVAQMPQ 184
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 663 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 719
Query: 358 LVRFV 362
L R+V
Sbjct: 720 LERYV 724
>gi|402855238|ref|XP_003892238.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Papio
anubis]
gi|402855240|ref|XP_003892239.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Papio
anubis]
Length = 899
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 286
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 461 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 517
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 518 LRELEKYV 525
>gi|449452116|ref|XP_004143806.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
gi|449485919|ref|XP_004157310.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
Length = 378
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 108/229 (47%), Gaps = 50/229 (21%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NNVYK 237
MR+ G IL ++ + K W F PVDV L L DY+++I KPMD T+++++E YK
Sbjct: 98 MRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYK 157
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL---------------- 281
+E DVRL F NA+ YN + V+ MA+TL AKFE+ + +L
Sbjct: 158 NVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEA 217
Query: 282 -------SKQQQRQGILGRG---------------------KAREMSLEEKMALGRSLEE 313
Q+ Q + R R++S EEK LG +L +
Sbjct: 218 EALLDMQLAQEAAQAKMARDISNEIYEVDMQLEELRELVVQNCRKISTEEKRKLGAALTK 277
Query: 314 LPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
L E++ K L IV + N S +E++LDI+A TL +L FV
Sbjct: 278 LSPEDISKALEIVAE---NNPSFQATAEEVDLDIDAQSESTLWRLKFFV 323
>gi|47216871|emb|CAG11678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 834
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L +L+ K W F PVD SL L DYHDIIK+PMDL T++ K++N Y
Sbjct: 405 LRYCNGVLKELLSKKHAGYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNREYL 464
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 465 DSQQFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFCFAKM 508
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F+ PVD V L L DYH IIK PMD+GT++ +LENN Y+ E +D
Sbjct: 59 LLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 118
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA++L F Q
Sbjct: 119 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQ 148
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 677 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 733
Query: 358 LVRFV 362
L R+V
Sbjct: 734 LERYV 738
>gi|198474627|ref|XP_002132733.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
gi|198138474|gb|EDY70135.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
Length = 485
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDII 218
PK K + A++ C EIL L K W F PVD +L L DY++II
Sbjct: 97 PKVKFESRLVKPKKKLSEALKSCNEILMVLFSKKHSAYAWPFYEPVDAQNLGLYDYYNII 156
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
K PMDLGTV+ KL+N VYK FA D+RL F+N YNP H + M E L FE ++
Sbjct: 157 KTPMDLGTVKQKLDNRVYKSASAFAADMRLIFSNCYKYNPVHHDIVIMCEKLQLAFEMLY 216
Query: 279 QKL 281
K+
Sbjct: 217 VKV 219
>gi|194696466|gb|ACF82317.1| unknown [Zea mays]
gi|413942791|gb|AFW75440.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 50/231 (21%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN---NV 235
+ MR+ G +L ++ K W F PVDVV+L+L DYH+II +PMD T++ K+E
Sbjct: 78 DLMRQFGVLLKEITSHKDAWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKMERKDGTC 137
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF----------QKLSKQQ 285
Y +E DVRL F NA+ YN + ++ MA++L KFE+ + +K K++
Sbjct: 138 YTNVREICSDVRLIFANAMKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEE 197
Query: 286 QRQGILGRGKARE----------------------------------MSLEEKMALGRSL 311
+ +G+ +RE M+ +EK LG +
Sbjct: 198 ESKGVAATNTSREVAIVKLAKDTDDELNQINKKLEELRKMVVHRCRKMTTDEKRKLGAGI 257
Query: 312 EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
L ++L K L IV + N S +E++LD++A TL +L FV
Sbjct: 258 CHLSPDDLSKALEIVAQ---DNPSFQTKAEEVDLDMDAQSETTLWRLKFFV 305
>gi|148232443|ref|NP_001086546.1| bromodomain containing 4 [Xenopus laevis]
gi|49899749|gb|AAH76786.1| Brd4-prov protein [Xenopus laevis]
Length = 1362
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 175 TSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL 231
+ T +R C I+ ++ K W F PVDV +L L DY +IIK PMDLGT++ K+
Sbjct: 365 SKTSEQLRYCAGIVREMFSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKM 424
Query: 232 ENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EN YK Q+FA DVRL F+N YNP H V MA L FE F K+
Sbjct: 425 ENCDYKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 474
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVDVV L L DY+ IIK PMD+GT++ +LEN+ Y QE +D
Sbjct: 69 VLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDMGTIKKRLENHFYWNAQECIQDF 128
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q ++ +++ ++ GRG+AR+
Sbjct: 129 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMPQEETELAVVQCKGRGRARK 183
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
+ R MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 631 RCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 688
Query: 355 LSQLVRFVDNF---KKAEKDKTE 374
L +L R+V + K+ +DK E
Sbjct: 689 LRELERYVTSCLRKKRKPQDKIE 711
>gi|410033225|ref|XP_003949509.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 797
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 200 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 259
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 260 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 303
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MDL T++ +LEN Y E ED F+N +YN G + MA+ L F Q ++
Sbjct: 1 MDLNTIKKRLENKYYMKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 60
Query: 282 SKQQQRQGILGRGK 295
+++Q G+ R K
Sbjct: 61 PQEEQVVGVKERIK 74
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 434 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 490
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 491 LRELEKYV 498
>gi|355745448|gb|EHH50073.1| hypothetical protein EGM_00839, partial [Macaca fascicularis]
Length = 957
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 284 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 343
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 344 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 387
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 50 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDF 109
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
F+N +YN G + MA+ L F QKLS+ Q + ++G GK R
Sbjct: 110 NTMFSNCYLYNKPGDDIVLMAQALEKLF---VQKLSQMPQEEQVVG-GKER 156
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 518 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 574
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 575 LRELEKYV 582
>gi|297279234|ref|XP_001100884.2| PREDICTED: bromodomain testis-specific protein-like [Macaca
mulatta]
Length = 983
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 309 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 368
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 369 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 412
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 266 MAETLSAKFEQMFQKLSKQQQRQGILGRGK----AREMSLEEKMALGRSLEELPQEELGK 321
M E + K E+ + K++++Q I + + A+ M+ +EK L ++ +LP ++LG+
Sbjct: 510 MCEQMRLK-EKSKRNQPKKRKQQYIGQKSEDEDNAKPMNYDEKRQLSLNINKLPGDKLGR 568
Query: 322 LLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDTLSQLVRFV 362
++ I++ R SLS + DEIE+D E L TL +L ++V
Sbjct: 569 VVHIIQSREP---SLSNSNPDEIEIDFETLKASTLRELEKYV 607
>gi|440904692|gb|ELR55166.1| Bromodomain-containing protein 3, partial [Bos grunniens mutus]
Length = 613
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 241 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 300
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 301 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 344
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 213 DYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSA 272
DYH IIK PMD+GT++ +LENN Y E +D F N +YN + MA+ L
Sbjct: 1 DYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEK 60
Query: 273 KFEQMFQKLSKQQ 285
F Q ++ +++
Sbjct: 61 IFLQKVAQMPQEE 73
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 497 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 553
Query: 358 LVRFV 362
L R+V
Sbjct: 554 LERYV 558
>gi|402855232|ref|XP_003892235.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Papio
anubis]
gi|402855234|ref|XP_003892236.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Papio
anubis]
gi|402855236|ref|XP_003892237.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Papio
anubis]
Length = 945
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
F+N +YN G + MA+ L F QKLS+ Q + ++G GK R
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLF---MQKLSQMPQEEQVVG-GKER 145
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 507 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 563
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 564 LRELEKYV 571
>gi|159507460|gb|ABW97743.1| bromodomain 4 [Xenopus laevis]
Length = 1366
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 175 TSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL 231
+ T +R C I+ ++ K W F PVDV +L L DY +IIK PMDLGT++ K+
Sbjct: 365 SKTSEQLRYCAGIVREMFSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKM 424
Query: 232 ENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EN YK Q+FA DVRL F+N YNP H V MA L FE F K+
Sbjct: 425 ENCDYKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 474
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVDVV L L DY+ IIK PMD+GT++ +LEN+ Y QE +D
Sbjct: 69 VLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDMGTIKKRLENHFYWNAQECIQDF 128
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q ++ +++ ++ GRG+AR+
Sbjct: 129 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMPQEETELAVVQCKGRGRARK 183
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
+ R MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 631 RCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 688
Query: 355 LSQLVRFVDNF---KKAEKDKTE 374
L +L R+V + K+ +DK E
Sbjct: 689 LRELERYVTSCLRKKRKPQDKIE 711
>gi|194225997|ref|XP_001917930.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 3
[Equus caballus]
Length = 728
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 630
Query: 358 LVRFV 362
L R+V
Sbjct: 631 LERYV 635
>gi|425906067|sp|Q4R8Y1.3|BRDT_MACFA RecName: Full=Bromodomain testis-specific protein
Length = 947
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
F+N +YN G + MA+ L F QKLS+ Q + ++G GK R
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLF---VQKLSQMPQEEQVVG-GKER 145
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 266 MAETLSAKFEQMFQKLSKQQQRQGILGRGK----AREMSLEEKMALGRSLEELPQEELGK 321
M E + K E+ + K++++Q I + + A+ M+ +EK L ++ +LP ++LG+
Sbjct: 474 MCEQMRLK-EKSKRNQPKKRKQQYIGQKSEDEDNAKPMNYDEKRQLSLNINKLPGDKLGR 532
Query: 322 LLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDTLSQLVRFV 362
++ I++ R SLS + DEIE+D E L TL +L ++V
Sbjct: 533 VVHIIQSREP---SLSNSNPDEIEIDFETLKASTLRELEKYV 571
>gi|332809506|ref|XP_003339041.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
gi|332809508|ref|XP_003308259.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
troglodytes]
Length = 824
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 286
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 461 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 517
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 518 LRELEKYV 525
>gi|397473969|ref|XP_003808466.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
paniscus]
gi|397473971|ref|XP_003808467.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Pan
paniscus]
Length = 901
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 286
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 461 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 517
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 518 LRELEKYV 525
>gi|355558166|gb|EHH14946.1| hypothetical protein EGK_00962, partial [Macaca mulatta]
Length = 897
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 280 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 339
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 340 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 383
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 46 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
F+N +YN G + MA+ L F QKLS+ Q + ++G GK R
Sbjct: 106 NTMFSNCYLYNKPGDDIVLMAQALEKLF---MQKLSQMPQEEQVVG-GKER 152
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 514 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 570
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 571 LRELEKYV 578
>gi|73967596|ref|XP_858014.1| PREDICTED: bromodomain-containing protein 3 isoform 3 [Canis lupus
familiaris]
Length = 728
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 630
Query: 358 LVRFV 362
L R+V
Sbjct: 631 LERYV 635
>gi|343962325|dbj|BAK62750.1| bromodomain testis-specific protein [Pan troglodytes]
Length = 947
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYMKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 147
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 507 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 563
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 564 LRELEKYV 571
>gi|195148234|ref|XP_002015079.1| GL19519 [Drosophila persimilis]
gi|194107032|gb|EDW29075.1| GL19519 [Drosophila persimilis]
Length = 486
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDII 218
PK K + A++ C EIL L K W F PVD +L L DY++II
Sbjct: 97 PKVKFESRLVKPKKKLSEALKSCNEILMVLFSKKHSAYAWPFYEPVDAQNLGLYDYYNII 156
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
K PMDLGTV+ KL+N VYK FA D+RL F+N YNP H + M E L FE ++
Sbjct: 157 KTPMDLGTVKQKLDNRVYKSASAFAADMRLIFSNCYKYNPVHHDIVIMCEKLQLAFEMLY 216
Query: 279 QKL 281
K+
Sbjct: 217 VKV 219
>gi|195655085|gb|ACG47010.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 50/231 (21%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN---NV 235
+ MR+ G +L ++ K W F PVDVV+L+L DYH+II +PMD T++ K+E
Sbjct: 78 DLMRQFGVLLKEITSHKDAWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKMERKDGTC 137
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF----------QKLSKQQ 285
Y +E DVRL F NA+ YN + ++ MA++L KFE+ + +K K++
Sbjct: 138 YTNVREICSDVRLIFANAMKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEE 197
Query: 286 QRQGILGRGKARE----------------------------------MSLEEKMALGRSL 311
+ +G+ +RE M+ +EK LG +
Sbjct: 198 ESKGVAATNTSREVAIVKLAKDTDDELNQINRKLEELRKMVVHRCRKMTTDEKRKLGAVI 257
Query: 312 EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
L ++L K L IV + N S +E++LD++A TL +L FV
Sbjct: 258 CHLSPDDLSKALEIVAQ---DNPSFQTKAEEVDLDMDAQSETTLWRLKFFV 305
>gi|397473963|ref|XP_003808463.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
paniscus]
gi|397473965|ref|XP_003808464.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
paniscus]
gi|397473967|ref|XP_003808465.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Pan
paniscus]
Length = 947
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 147
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 507 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 563
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 564 LRELEKYV 571
>gi|301770655|ref|XP_002920742.1| PREDICTED: bromodomain-containing protein 3-like [Ailuropoda
melanoleuca]
Length = 728
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDGREYA 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 630
Query: 358 LVRFV 362
L R+V
Sbjct: 631 LERYV 635
>gi|296482055|tpg|DAA24170.1| TPA: bromodomain containing protein 3 [Bos taurus]
Length = 722
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 568 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 624
Query: 358 LVRFV 362
L R+V
Sbjct: 625 LERYV 629
>gi|326494522|dbj|BAJ94380.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 16/129 (12%)
Query: 160 GNPKAKRAAAGTXSLTSTKN--------------AMRRCGEILTKLMKDKQGWAFNTPVD 205
GN +++++ GT S++S++N R C IL KLM GW F+ PVD
Sbjct: 48 GNKRSQKS--GTTSISSSENRPSSNNKAGSMNASKTRVCRNILGKLMDHPGGWLFHKPVD 105
Query: 206 VVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYA 265
+ DY D+I+ PMDLGTV+ KL N Y +FA DVRLTF+NA+ YNP G+ V+
Sbjct: 106 PDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGNQVHT 165
Query: 266 MAETLSAKF 274
+AE L+ F
Sbjct: 166 VAEQLNIMF 174
>gi|224473811|gb|ACN49152.1| bromodomain containing 2 [Oryzias dancena]
Length = 826
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L +L+ K W F PVD VSL L DYH+IIK+PMDL T++ K+++ Y+
Sbjct: 392 LRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMDSREYR 451
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+F+ DVRL F+N YNP H V AMA L FE F K+
Sbjct: 452 DAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFCFAKM 495
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F+ PVD V L L DYH IIK PMD+GT++ +LENN Y+ E +D
Sbjct: 85 VLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA++L F QK+++ Q
Sbjct: 145 NAMFTNCYIYNKPTDDIVLMAQSLEKAF---LQKVAQMPQ 181
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 668 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 724
Query: 358 LVRFV 362
L R+V
Sbjct: 725 LERYV 729
>gi|116003963|ref|NP_001070341.1| bromodomain-containing protein 3 [Bos taurus]
gi|115305162|gb|AAI23579.1| Bromodomain containing 3 [Bos taurus]
Length = 722
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 568 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 624
Query: 358 LVRFV 362
L R+V
Sbjct: 625 LERYV 629
>gi|332809502|ref|XP_524767.3| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
troglodytes]
gi|332809504|ref|XP_003308258.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
troglodytes]
gi|410033223|ref|XP_003949508.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 870
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYMKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 147
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 507 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 563
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 564 LRELEKYV 571
>gi|281349316|gb|EFB24900.1| hypothetical protein PANDA_009517 [Ailuropoda melanoleuca]
Length = 696
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDGREYA 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 630
Query: 358 LVRFV 362
L R+V
Sbjct: 631 LERYV 635
>gi|338797761|ref|NP_001229737.1| bromodomain testis-specific protein isoform c [Homo sapiens]
gi|338797763|ref|NP_001229736.1| bromodomain testis-specific protein isoform c [Homo sapiens]
Length = 901
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 286
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 461 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 517
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 518 LRELEKYV 525
>gi|221046272|dbj|BAH14813.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 286
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 461 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 517
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 518 LRELEKYV 525
>gi|221044240|dbj|BAH13797.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 286
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 461 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 517
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 518 LRELEKYV 525
>gi|426330336|ref|XP_004026173.1| PREDICTED: bromodomain testis-specific protein [Gorilla gorilla
gorilla]
Length = 883
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVD+ +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 210 LRHCSEILKEMLAKKHFSYAWPFYNPVDINALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 269
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 270 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 313
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 213 DYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSA 272
DY+ IIK PMDL T++ +LEN Y E ED F+N +YN G + MA+ L
Sbjct: 2 DYYTIIKNPMDLNTIKKRLENKYYGKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEK 61
Query: 273 KFEQMFQKLSKQQQRQGILG 292
F QKLS+ Q + ++G
Sbjct: 62 LF---MQKLSQMPQEEQVVG 78
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 444 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNADEIEIDFETLKAST 500
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 501 LRELEKYV 508
>gi|338797768|ref|NP_001229739.1| bromodomain testis-specific protein isoform d [Homo sapiens]
gi|119593515|gb|EAW73109.1| bromodomain, testis-specific, isoform CRA_b [Homo sapiens]
Length = 874
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 200 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 259
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 260 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 303
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MDL T++ +LEN Y E ED F+N +YN G + MA+ L F Q ++
Sbjct: 1 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 60
Query: 282 SKQQQRQGILGRGK 295
+++Q G+ R K
Sbjct: 61 PQEEQVVGVKERIK 74
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 434 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 490
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 491 LRELEKYV 498
>gi|224473804|gb|ACN49148.1| bromodomain containing 2 [Oryzias dancena]
Length = 610
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L +L+ K W F PVD VSL L DYH+IIK+PMDL T++ K+++ Y+
Sbjct: 392 LRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMDSREYR 451
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+F+ DVRL F+N YNP H V AMA L FE F K+
Sbjct: 452 DAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFCFAKM 495
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F+ PVD V L L DYH IIK PMD+GT++ +LENN Y+ E +D
Sbjct: 85 VLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA++L F Q ++ +++
Sbjct: 145 NAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEE 183
>gi|349805091|gb|AEQ18018.1| hypothetical protein [Hymenochirus curtipes]
Length = 497
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 54/85 (63%)
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
W F PVDV +L L DY +IIK PMDLGT++ K+EN YK PQEFA DVRL F+N Y
Sbjct: 115 AWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENREYKEPQEFAADVRLMFSNCYKY 174
Query: 257 NPKGHYVYAMAETLSAKFEQMFQKL 281
NP H V MA L FE F K+
Sbjct: 175 NPPDHEVVIMARKLQDVFEMRFAKM 199
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
+ R MS EEK L + +LP E+LG+++ I++ R S + + DEIE+D E L T
Sbjct: 317 RCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSRESSLK--NSNPDEIEIDFETLKPST 374
Query: 355 LSQLVRF 361
L +L R+
Sbjct: 375 LRELERY 381
>gi|431898968|gb|ELK07338.1| Bromodomain-containing protein 3 [Pteropus alecto]
Length = 756
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 342 LRHCESILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 401
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 402 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 445
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 30/129 (23%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRL------------------------------RDYHD 216
++ L K + W F PVD + L L RDYH
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPVSARPTPLLQLPGGAAPTLAEVLPEMWLVRDYHK 105
Query: 217 IIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
IIK PMD+GT++ +LEN+ Y E +D F N +YN + MA+ L F Q
Sbjct: 106 IIKNPMDMGTIKKRLENSYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQ 165
Query: 277 MFQKLSKQQ 285
++ +++
Sbjct: 166 KVAQMPQEE 174
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 602 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 658
Query: 358 LVRFV 362
L R+V
Sbjct: 659 LERYV 663
>gi|351702676|gb|EHB05595.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 722
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 271 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 330
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 331 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 374
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 5 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 64
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 65 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 103
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 569 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 625
Query: 358 LVRFV 362
L R+V
Sbjct: 626 LERYV 630
>gi|344309215|ref|XP_003423272.1| PREDICTED: bromodomain-containing protein 3 [Loxodonta africana]
Length = 727
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 311 LRYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 370
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 371 DAQSFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LEN+ Y E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQDF 104
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 143
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 573 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 629
Query: 358 LVRFV 362
L R+V
Sbjct: 630 LERYV 634
>gi|46399198|ref|NP_001717.2| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|46399200|ref|NP_997072.1| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|338797755|ref|NP_001229734.1| bromodomain testis-specific protein isoform b [Homo sapiens]
Length = 947
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 147
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 507 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 563
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 564 LRELEKYV 571
>gi|226694198|sp|Q58F21.4|BRDT_HUMAN RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Cancer/testis antigen 9; Short=CT9; AltName:
Full=RING3-like protein
gi|108752098|gb|AAI11928.1| BRDT protein [synthetic construct]
gi|110645559|gb|AAI18499.1| BRDT protein [synthetic construct]
Length = 947
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 147
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 507 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 563
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 564 LRELEKYV 571
>gi|395513633|ref|XP_003761027.1| PREDICTED: bromodomain-containing protein 4 [Sarcophilus harrisii]
Length = 1379
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C I+ ++ K W F PVDV +L L DY DIIK PMDL T++SKLE Y+
Sbjct: 375 LKYCTGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLETREYR 434
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 435 DAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 478
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAHECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAREMSLEE 303
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+ ++
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISELPPEETEIVIVQAKGRGRGRKEAVTS 189
Query: 304 K 304
K
Sbjct: 190 K 190
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 627 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 684
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 685 LRELERYVTSCLRKKRKPQAEK 706
>gi|338797757|ref|NP_001229735.1| bromodomain testis-specific protein isoform a [Homo sapiens]
Length = 951
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 277 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 336
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 337 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 380
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI---LGRGKA 296
F+N +YN G + MA+ L F Q ++ +++Q G+ + +GKA
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIKKGKA 151
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 511 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 567
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 568 LRELEKYV 575
>gi|403284014|ref|XP_003933383.1| PREDICTED: bromodomain testis-specific protein [Saimiri boliviensis
boliviensis]
Length = 1132
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 458 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 517
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
EFA DVRL F N YNP H V MA L FE F
Sbjct: 518 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 558
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
IL L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 221 ILKDLWKHDLSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDF 280
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMA 306
F+N +YN G + MA+ L F QKLS+ Q + ++G + + ++ +A
Sbjct: 281 NTMFSNCYLYNKPGDDIVLMAQALEELF---MQKLSQMPQEEEVVGVKERIKKGTQQNIA 337
Query: 307 LGRSLEELP 315
+ + E+ P
Sbjct: 338 VSFAKEKSP 346
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ M+ +EK L + +LP ++LG+++ I++ R SL + + DEIE+D E L T
Sbjct: 692 AKPMNYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRNSNPDEIEIDFETLKAST 748
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 749 LRELEKYV 756
>gi|119593512|gb|EAW73106.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593513|gb|EAW73107.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593514|gb|EAW73108.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593516|gb|EAW73110.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593517|gb|EAW73111.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|208965898|dbj|BAG72963.1| bromodomain, testis-specific [synthetic construct]
Length = 947
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 147
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 507 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 563
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 564 LRELEKYV 571
>gi|350597125|ref|XP_003484360.1| PREDICTED: bromodomain-containing protein 3 [Sus scrofa]
Length = 726
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFVDNFKKAEKDKTEKEPMCS 380
L R+V KA K +++P+ +
Sbjct: 629 LERYV----KACLQKKQRKPLST 647
>gi|221044398|dbj|BAH13876.1| unnamed protein product [Homo sapiens]
Length = 951
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 277 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 336
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 337 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 380
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKNLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI---LGRGKA 296
F+N +YN G + MA+ L F Q ++ +++Q G+ + +GKA
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIKKGKA 151
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 511 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 567
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 568 LRELEKYV 575
>gi|33355659|gb|AAQ16198.1| testis-specific BRDT protein [Homo sapiens]
Length = 960
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 286 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 345
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 346 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 389
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 52 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 111
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 112 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 160
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DE+E+D E L T
Sbjct: 520 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEMEIDFETLKAST 576
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 577 LRELEKYV 584
>gi|390466206|ref|XP_003733541.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Callithrix jacchus]
Length = 932
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 272 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 331
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
EFA DVRL F N YNP H V MA L FE F
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 372
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
IL L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 ILKDLWKHDFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEELFMQKLSQMPQEEQVVGVKERIK 147
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 284 QQQRQGILG-----RGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSG--NGSL 336
++++Q LG A+ M+ +EK L + +LP ++LG+++ I++ R N SL
Sbjct: 489 KKRKQQFLGVKPEDEDNAKPMNYDEKRQLSLDINKLPGDKLGQVVNIIQSREPSLRNSSL 548
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFV 362
DEIE+D E L TL +L ++V
Sbjct: 549 ----DEIEIDFETLKASTLRELEKYV 570
>gi|427780035|gb|JAA55469.1| Putative bromodomain-containing protein 2 [Rhipicephalus
pulchellus]
Length = 873
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 53/85 (62%)
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
W F PVD L L DYH+IIK PMDLGTV+ K++N YK P+EFA DVRL F N Y
Sbjct: 420 AWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKY 479
Query: 257 NPKGHYVYAMAETLSAKFEQMFQKL 281
NP H V AMA L FE + K+
Sbjct: 480 NPPDHEVVAMARKLQDVFEMRYAKM 504
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 158 PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLM-KDKQGWAFNTPVDVVSLRLRDYHD 216
PF P ++R T N ++ +++ K M K + W F PVD V L L DYH
Sbjct: 48 PFVPPASRR--------QRTTNQLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHR 99
Query: 217 IIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
II+ PMDLGT++ +LE+ Y QE ED + F N VYN G V MA+ L F
Sbjct: 100 IIRHPMDLGTIKKRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLT 159
Query: 277 MFQKLSKQQ 285
++ K++
Sbjct: 160 KITEMPKEE 168
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 704 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 760
Query: 355 LSQLVRFV 362
L +L +V
Sbjct: 761 LRELESYV 768
>gi|348574826|ref|XP_003473191.1| PREDICTED: bromodomain-containing protein 3-like [Cavia porcellus]
Length = 725
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + + W F PVD + L L DYH IIK PMD+GT++ +LEN Y E +D
Sbjct: 46 VVKTLWRHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENTYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|397567839|gb|EJK45812.1| hypothetical protein THAOC_35556, partial [Thalassiosira oceanica]
Length = 1238
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 63/99 (63%)
Query: 183 RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEF 242
RC EIL L + GW F TPV+ V L + DY DIIKKPMDLGT+ KL+ +Y ++F
Sbjct: 739 RCSEILKSLQNHEHGWVFATPVNPVELGIDDYFDIIKKPMDLGTIGEKLDQELYHSFEDF 798
Query: 243 AEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
DV+LTF NA+ YN + V+ MA+ L KF+ + K+
Sbjct: 799 RADVQLTFENAMKYNEEQTVVHDMAKALKKKFDLDYNKM 837
>gi|67967916|dbj|BAE00440.1| unnamed protein product [Macaca fascicularis]
Length = 609
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARRLQDVFETHFSKI 376
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
F+N +YN G + MA+ L F QKLS+ Q + ++G GK R
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLF---MQKLSQMPQEEQVVG-GKER 145
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 507 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 563
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 564 LRELEKYV 571
>gi|71897271|ref|NP_001025845.1| bromodomain-containing protein 2 [Gallus gallus]
gi|1370092|emb|CAA65449.1| kinase [Gallus gallus]
Length = 729
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y
Sbjct: 297 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 356
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEFA DVRL F+N YNP H V AMA L FE + K+ + Q
Sbjct: 357 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQ 405
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 138
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 567 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 623
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 624 LRELERYV 631
>gi|21594631|gb|AAH31536.1| Bromodomain containing 3 [Mus musculus]
Length = 726
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 143
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 573 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 629
Query: 358 LVRFV 362
L R+V
Sbjct: 630 LERYV 634
>gi|165972331|ref|NP_001107045.1| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|165972333|ref|NP_075825.3| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|47115837|sp|Q8K2F0.2|BRD3_MOUSE RecName: Full=Bromodomain-containing protein 3; AltName:
Full=Bromodomain-containing FSH-like protein FSRG2
gi|74141421|dbj|BAE35988.1| unnamed protein product [Mus musculus]
gi|74195657|dbj|BAE39636.1| unnamed protein product [Mus musculus]
gi|74204674|dbj|BAE35406.1| unnamed protein product [Mus musculus]
gi|148676422|gb|EDL08369.1| bromodomain containing 3, isoform CRA_d [Mus musculus]
Length = 726
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 143
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 573 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 629
Query: 358 LVRFV 362
L R+V
Sbjct: 630 LERYV 634
>gi|332887140|dbj|BAJ53019.2| Bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEFA DVRL F+N YNP H V AMA L FE + K+ + Q
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQ 409
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 138
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 571 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 627
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 628 LRELERYV 635
>gi|354501563|ref|XP_003512860.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Cricetulus
griseus]
gi|344252302|gb|EGW08406.1| Bromodomain-containing protein 3 [Cricetulus griseus]
Length = 727
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 158
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 630
Query: 358 LVRFV 362
L R+V
Sbjct: 631 LERYV 635
>gi|2554915|gb|AAB87862.1| BRDT [Homo sapiens]
Length = 947
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYSFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 147
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ M+ +EK L ++ +LP ++LG+++ I++ R SLS + DEIE+D E L T
Sbjct: 507 AKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREP---SLSNSNPDEIEIDFETLKAST 563
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 564 LRELEKYV 571
>gi|197304453|dbj|BAG69393.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEFA DVRL F+N YNP H V AMA L FE + K+ + Q
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQ 409
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 138
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 571 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 627
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 628 LRELERYV 635
>gi|148356975|dbj|BAF62999.1| Bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304348|dbj|BAG69295.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304378|dbj|BAG69323.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304408|dbj|BAG69351.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304468|dbj|BAG69407.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304482|dbj|BAG69420.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304512|dbj|BAG69448.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304526|dbj|BAG69461.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863985|gb|ACY01481.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863995|gb|ACY01490.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEFA DVRL F+N YNP H V AMA L FE + K+ + Q
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQ 409
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 138
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 571 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 627
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 628 LRELERYV 635
>gi|8575733|gb|AAF78072.1| bromodomain-containing FSH-like protein FSRG2 [Mus musculus]
gi|46241516|gb|AAS82951.1| endothelial differentiation inhibitory protein D18 [Mus musculus]
Length = 726
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 143
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 9/104 (8%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 573 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 629
Query: 358 LVRFVDNFKKAEKDKTEKEPM-CSQVAVAVAAPVVIERSKKGDV 400
L R+V K+ K +++P+ S A + VV+ + KK ++
Sbjct: 630 LERYV----KSCLQKKQRKPLSTSGKKQAAKSKVVLAQEKKKEL 669
>gi|34392374|dbj|BAC82511.1| Serine threonine Kinase [Coturnix japonica]
Length = 735
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEFA DVRL F+N YNP H V AMA L FE + K+ + Q
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQ 409
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 138
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 573 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 629
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 630 LRELERYV 637
>gi|441637323|ref|XP_004090057.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 872
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N Y+
Sbjct: 200 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYE 259
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 260 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 303
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MDL T++ +LEN Y E ED F+N +YN G + MA+ L F QKL
Sbjct: 1 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF---MQKL 57
Query: 282 SKQQQRQGILGRGKAR 297
S+ Q + ++G GK R
Sbjct: 58 SQMPQEEQVVG-GKER 72
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 266 MAETLSAKFEQMFQKLSKQQQRQGILGRGK----AREMSLEEKMALGRSLEELPQEELGK 321
M E + K E+ + K+++RQ I + + A+ M+ +EK L ++ +LP ++LG+
Sbjct: 401 MCEQMRLK-EKSKRNQPKKRKRQFIGLKSEDEDNAKPMNYDEKRQLSLNINKLPGDKLGR 459
Query: 322 LLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
++ I++ R S + DEIE+D E L TL +L ++V
Sbjct: 460 VVHIIQSREPSLS--SSNPDEIEIDFETLKASTLRELEKYV 498
>gi|148676419|gb|EDL08366.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
gi|148676420|gb|EDL08367.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
Length = 731
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 316 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 375
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 376 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 419
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 50 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 109
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 110 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 148
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 578 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 634
Query: 358 LVRFV 362
L R+V
Sbjct: 635 LERYV 639
>gi|165972335|ref|NP_001107046.1| bromodomain-containing protein 3 isoform 1 [Mus musculus]
gi|62485072|dbj|BAD91008.2| Orfx [Mus musculus]
gi|148676418|gb|EDL08365.1| bromodomain containing 3, isoform CRA_a [Mus musculus]
Length = 743
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 143
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 590 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 646
Query: 358 LVRFV 362
L R+V
Sbjct: 647 LERYV 651
>gi|11067749|ref|NP_031397.1| bromodomain-containing protein 3 [Homo sapiens]
gi|12643726|sp|Q15059.1|BRD3_HUMAN RecName: Full=Bromodomain-containing protein 3; AltName:
Full=RING3-like protein
gi|46241518|gb|AAS82952.1| endothelial differentiation inhibitory protein D18 [Homo sapiens]
gi|119608519|gb|EAW88113.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|119608521|gb|EAW88115.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|168274318|dbj|BAG09579.1| bromodomain-containing protein 3 [synthetic construct]
Length = 726
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|7512236|pir||T28145 RING3 kinase - chicken
gi|3129967|emb|CAA18965.1| RING3 kinase [synthetic construct]
gi|197304363|dbj|BAG69309.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304393|dbj|BAG69337.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304423|dbj|BAG69365.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304438|dbj|BAG69379.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304497|dbj|BAG69434.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEFA DVRL F+N YNP H V AMA L FE + K+ + Q
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQ 409
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 138
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 571 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 627
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 628 LRELERYV 635
>gi|397503778|ref|XP_003822496.1| PREDICTED: bromodomain-containing protein 3 [Pan paniscus]
Length = 728
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 630
Query: 358 LVRFV 362
L R+V
Sbjct: 631 LERYV 635
>gi|157819431|ref|NP_001102045.1| bromodomain-containing protein 3 [Rattus norvegicus]
gi|149039215|gb|EDL93435.1| bromodomain containing 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 725
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 158
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|197304540|dbj|BAG69474.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEFA DVRL F+N YNP H V AMA L FE + K+ + Q
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQ 409
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKLPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 138
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 571 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 627
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 628 LRELERYV 635
>gi|114627431|ref|XP_001170358.1| PREDICTED: bromodomain-containing protein 3 isoform 8 [Pan
troglodytes]
gi|410223876|gb|JAA09157.1| bromodomain containing 3 [Pan troglodytes]
gi|410253994|gb|JAA14964.1| bromodomain containing 3 [Pan troglodytes]
gi|410301574|gb|JAA29387.1| bromodomain containing 3 [Pan troglodytes]
gi|410339465|gb|JAA38679.1| bromodomain containing 3 [Pan troglodytes]
Length = 726
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|149039214|gb|EDL93434.1| bromodomain containing 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197246453|gb|AAI68949.1| Brd3 protein [Rattus norvegicus]
Length = 742
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 158
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 589 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 645
Query: 358 LVRFV 362
L R+V
Sbjct: 646 LERYV 650
>gi|384501114|gb|EIE91605.1| hypothetical protein RO3G_16316 [Rhizopus delemar RA 99-880]
Length = 227
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 101/201 (50%), Gaps = 20/201 (9%)
Query: 181 MRRCGEILTKLMKDKQ-GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
MR C +IL L K + F PVD V+L + DY I+K P+DL T+ +KL N Y P
Sbjct: 1 MRSCFQILNHLKAQKHLSFPFLYPVDPVALNIPDYPSIVKHPIDLSTIETKLNQNAYDSP 60
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ---RQGILGRGKA 296
FA D++L FNN +YN +Y +A+ L A F++ ++ +KQ RQ + A
Sbjct: 61 HAFAADIKLMFNNCYLYNAPELPIYDVAKELEAIFDRQWEIKAKQPASVPRQIKPSKRPA 120
Query: 297 RE-------------MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEI 343
E +S EEK L + L + L +++ I++ S L EI
Sbjct: 121 VERKMKSRKKKKRESLSYEEKKELSERINRLTGDRLNEVIQIIQ---SSLPDLDKGETEI 177
Query: 344 ELDIEALDNDTLSQLVRFVDN 364
LDI+ALD +TL +L FV N
Sbjct: 178 VLDIDALDINTLKRLNDFVHN 198
>gi|354501565|ref|XP_003512861.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Cricetulus
griseus]
Length = 744
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 591 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 647
Query: 358 LVRFV 362
L R+V
Sbjct: 648 LERYV 652
>gi|169730373|gb|ACA64774.1| bromodomain-containing protein 2 [Meleagris gallopavo]
Length = 779
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y
Sbjct: 347 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 406
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEFA DVRL F+N YNP H V AMA L FE + K+ + Q
Sbjct: 407 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQ 455
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 184
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 617 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 673
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 674 LRELERYV 681
>gi|40788944|dbj|BAA05393.2| KIAA0043 [Homo sapiens]
Length = 731
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 317 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 376
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 377 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 420
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 51 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 110
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 111 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 149
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 577 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 633
Query: 358 LVRFV 362
L R+V
Sbjct: 634 LERYV 638
>gi|332221880|ref|XP_003260091.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Nomascus
leucogenys]
gi|441637320|ref|XP_004090056.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 899
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N Y+
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYE 286
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 266 MAETLSAKFEQMFQKLSKQQQRQGILGRGK----AREMSLEEKMALGRSLEELPQEELGK 321
M E + K E+ + K+++RQ I + + A+ M+ +EK L ++ +LP ++LG+
Sbjct: 428 MCEQMRLK-EKSKRNQPKKRKRQFIGLKSEDEDNAKPMNYDEKRQLSLNINKLPGDKLGR 486
Query: 322 LLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
++ I++ R S + DEIE+D E L TL +L ++V
Sbjct: 487 VVHIIQSREPSLS--SSNPDEIEIDFETLKASTLRELEKYV 525
>gi|255084403|ref|XP_002508776.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226524053|gb|ACO70034.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 852
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 5/106 (4%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL-----E 232
K M+ C E L+ + K K WAFN PVD ++L + DY DIIK PMD GT++ KL +
Sbjct: 251 KALMKECRECLSSVRKHKYAWAFNKPVDPIALHIPDYFDIIKNPMDFGTIKEKLDKKSQQ 310
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
N Y PQEFA+D+RL F+N +YN M TL +FE+ +
Sbjct: 311 NGAYSGPQEFADDMRLVFDNCALYNTPDSDAGLMGSTLQQEFEKAW 356
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 18/111 (16%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+MS EK L L ELP+++ +++ IV +R++ G D IE++IE LD+ TL
Sbjct: 509 RDMSYAEKQELTELLGELPEDKQARVVQIVAERHAEMG--GAEDDLIEINIEELDSVTLW 566
Query: 357 QLVRFVDNFKKAEKDK----------------TEKEPMCSQVAVAVAAPVV 391
+L R+V + K +K K E+E M + ++ V P+V
Sbjct: 567 KLDRYVRSCLKPKKKKPTQADMLLEAQRLEAEAERELMQVEASLGVGQPIV 617
>gi|395844316|ref|XP_003794908.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Otolemur
garnettii]
Length = 726
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|355752948|gb|EHH56994.1| hypothetical protein EGM_06545 [Macaca fascicularis]
Length = 726
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKAREMS 300
F N +YN + MA+ L F QK+++ Q + L +GK R+ S
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRKPS 160
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|402896155|ref|XP_003911172.1| PREDICTED: bromodomain-containing protein 3 [Papio anubis]
Length = 726
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKAREMS 300
F N +YN + MA+ L F QK+++ Q + L +GK R+ S
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRKPS 160
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|426363503|ref|XP_004048879.1| PREDICTED: bromodomain-containing protein 3 [Gorilla gorilla
gorilla]
Length = 726
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|351711490|gb|EHB14409.1| Bromodomain-containing protein 4 [Heterocephalus glaber]
Length = 1225
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
P +++ A S ++ C IL ++ K W F PVDV +L L DY DII
Sbjct: 346 PDSQQHPAPEKSNNKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDII 405
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
K PMD+ T++SKLE+ Y+ QEF DVRL F+N YNP H V AMA L FE F
Sbjct: 406 KHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 465
Query: 279 QKL 281
K+
Sbjct: 466 AKM 468
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 104 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 163
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 164 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 218
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 616 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 673
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 674 LRELERYVTSCLRKKRKPQAEK 695
>gi|384254936|gb|AFH75302.1| BRD2 [Lyrurus tetrix]
Length = 779
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y
Sbjct: 347 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 406
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEFA DVRL F+N YNP H V AMA L FE + K+ + Q
Sbjct: 407 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQ 455
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 184
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 617 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 673
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 674 LRELERYV 681
>gi|395146456|gb|AFN53616.1| BRD2 [Chrysolophus pictus]
Length = 733
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y
Sbjct: 301 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 360
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEFA DVRL F+N YNP H V AMA L FE + K+ + Q
Sbjct: 361 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQ 409
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 138
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 571 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 627
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 628 LRELERYV 635
>gi|332255339|ref|XP_003276790.1| PREDICTED: bromodomain-containing protein 3 [Nomascus leucogenys]
Length = 726
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|332221876|ref|XP_003260089.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Nomascus
leucogenys]
gi|332221878|ref|XP_003260090.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Nomascus
leucogenys]
gi|441637315|ref|XP_004090055.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 945
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N Y+
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYE 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
F+N +YN G + MA+ L F QKLS+ Q + ++G GK R
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLF---MQKLSQMPQEEQVVG-GKER 145
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 266 MAETLSAKFEQMFQKLSKQQQRQGILGRGK----AREMSLEEKMALGRSLEELPQEELGK 321
M E + K E+ + K+++RQ I + + A+ M+ +EK L ++ +LP ++LG+
Sbjct: 474 MCEQMRLK-EKSKRNQPKKRKRQFIGLKSEDEDNAKPMNYDEKRQLSLNINKLPGDKLGR 532
Query: 322 LLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
++ I++ R S + DEIE+D E L TL +L ++V
Sbjct: 533 VVHIIQSREPSLS--SSNPDEIEIDFETLKASTLRELEKYV 571
>gi|116283260|gb|AAH05281.1| BRDT protein [Homo sapiens]
Length = 465
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK MDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNSMDLNTIKKRLENKYYAKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 147
>gi|28839607|gb|AAH47900.1| BRDT protein, partial [Homo sapiens]
Length = 463
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 147
>gi|395844318|ref|XP_003794909.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Otolemur
garnettii]
Length = 743
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 589 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 645
Query: 358 LVRFV 362
L R+V
Sbjct: 646 LERYV 650
>gi|302564433|ref|NP_001181047.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|355567354|gb|EHH23695.1| hypothetical protein EGK_07225 [Macaca mulatta]
gi|383421773|gb|AFH34100.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|384949538|gb|AFI38374.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|387542198|gb|AFJ71726.1| bromodomain-containing protein 3 [Macaca mulatta]
Length = 726
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKAREMS 300
F N +YN + MA+ L F QK+++ Q + L +GK R+ S
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRKPS 160
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|297685659|ref|XP_002820401.1| PREDICTED: bromodomain-containing protein 3 [Pongo abelii]
Length = 726
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|62020593|gb|AAH17582.1| BRDT protein, partial [Homo sapiens]
Length = 462
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 147
>gi|38541875|gb|AAH62700.1| BRDT protein, partial [Homo sapiens]
Length = 464
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F PVDV +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T+ +LEN Y E ED
Sbjct: 39 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIIKRLENKYYAKASECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGK 295
F+N +YN G + MA+ L F Q ++ +++Q G+ R K
Sbjct: 99 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIK 147
>gi|354480438|ref|XP_003502414.1| PREDICTED: bromodomain testis-specific protein-like [Cricetulus
griseus]
Length = 839
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL +++ K W F PVD +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 272 LKYCSEILKEMLAKKHLSYAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQEYK 331
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V +MA L FE F K+
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVSMARMLQDVFEMHFAKI 375
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 38 VLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYVKASECIEDF 97
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMA 306
F+N +YN G + MA+ L F QKLS+ Q + ++G + + +++ A
Sbjct: 98 NTMFSNCYLYNKPGDDIVLMAQALEKLF---LQKLSQMPQEEQVVGGKERIKKDTQQQTA 154
Query: 307 LGRSLEELP 315
+ E++P
Sbjct: 155 ASSAKEQIP 163
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ M+ +EK L + +LP E+LG+++ I++ R SL + + DEIE+D E L T
Sbjct: 503 AKPMNYDEKRQLSLDINKLPGEKLGRIVHIIQSREP---SLRNSNPDEIEIDFETLKPST 559
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 560 LRELEKYV 567
>gi|156356469|ref|XP_001623945.1| predicted protein [Nematostella vectensis]
gi|156210690|gb|EDO31845.1| predicted protein [Nematostella vectensis]
Length = 467
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL + K W F PVD +L L DYHDIIK+PMD+ +++KLEN Y
Sbjct: 287 LKYCSTILKDMFSKKHYAYAWPFYKPVDAEALGLHDYHDIIKQPMDMTEIKNKLENRAYD 346
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
P EFA D+RL F+N YNP H V MA L FE F K+ ++
Sbjct: 347 SPSEFAADIRLMFSNCYRYNPPDHDVVKMARQLQDVFEMKFAKMPEE 393
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F PVD V L L DYH IIKKPMDLGT++ KLENN Y C QE ED
Sbjct: 26 VLKGLWRHHHAWPFREPVDAVKLNLPDYHTIIKKPMDLGTIKKKLENNEYPCAQECIEDF 85
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG 292
RL NN YN G + M +++ F Q + ++++ I+G
Sbjct: 86 RLMINNCYTYNKPGDDIVLMCQSMDKLFHQKIAMMPP-EEKEIIIG 130
>gi|403301507|ref|XP_003941429.1| PREDICTED: bromodomain-containing protein 3 [Saimiri boliviensis
boliviensis]
Length = 726
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 628
Query: 358 LVRFV 362
L R+V
Sbjct: 629 LERYV 633
>gi|50400639|sp|Q9ESU6.1|BRD4_MOUSE RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Mitotic chromosome-associated protein; Short=MCAP
gi|9931486|gb|AAG02191.1|AF273217_1 cell proliferation related protein CAP [Mus musculus]
Length = 1400
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 664
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 665 LRELERYVTSCLRKKRKPQAEK 686
>gi|213512228|ref|NP_001094373.1| bromodomain containing 4 [Rattus norvegicus]
Length = 1403
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Query: 123 RVRNL---GSRIANSDFQATHAYPTTKSQNRGGSKRANP-FGNP-KAKRAAAGTXSLTST 177
R+RNL G + S T A +S N + P NP K KR L
Sbjct: 10 RLRNLPVMGDGLETSQMSTTQAQAQPQSANAASTNPPPPETSNPNKPKRQTNQLQYLLRV 69
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y
Sbjct: 70 ---------VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW 120
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRG 294
QE +D F N +YN G + MAE L F Q +L ++ I+ GRG
Sbjct: 121 NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRG 180
Query: 295 KARE 298
+ R+
Sbjct: 181 RGRK 184
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 664
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 665 LRELERYVTSCLRKKRKPQAEK 686
>gi|443611854|gb|AGC96178.1| bromodomain-containing protein 2 [Tympanuchus cupido]
Length = 779
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y
Sbjct: 347 LKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRDYH 406
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEFA DVRL F+N YNP H V AMA L FE + K+ + Q
Sbjct: 407 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDEPQ 455
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 184
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 617 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 673
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 674 LRELERYV 681
>gi|74184776|dbj|BAE27987.1| unnamed protein product [Mus musculus]
Length = 1401
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 356 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 415
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 416 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 459
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 608 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 665
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 666 LRELERYVTSCLRKKRKPQAEK 687
>gi|348552081|ref|XP_003461857.1| PREDICTED: bromodomain-containing protein 4-like [Cavia porcellus]
Length = 1373
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 662
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 663 LRELERYVTSCLRKKRKPQAEK 684
>gi|330414421|gb|AEC13624.1| bromodomain containing protein 2 [Ginglymostoma cirratum]
gi|339895692|dbj|BAK52515.1| bromodomain containing 2 [Ginglymostoma cirratum]
Length = 783
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL T++ K++ Y+
Sbjct: 357 LKYCNGILKELLSKKHAAYAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKRKMDEREYQ 416
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 417 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRFAKM 460
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 179 NAMRRCGEILTK-LMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
N ++ ++L K L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y
Sbjct: 87 NQVQYMQKVLMKALWKHQFAWPFYQPVDAVKLSLPDYHKIIKQPMDMGTIKKRLENNYYW 146
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
E +D F N +YN + MA+TL F Q ++ +++
Sbjct: 147 SASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKLFLQKVAQMPQEE 194
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
R M+ +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 621 CRPMTYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPST 677
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 678 LRELERYV 685
>gi|149034725|gb|EDL89462.1| bromodomain containing 4, isoform CRA_a [Rattus norvegicus]
Length = 915
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Query: 123 RVRNL---GSRIANSDFQATHAYPTTKSQNRGGSKRANP-FGNP-KAKRAAAGTXSLTST 177
R+RNL G + S T A +S N + P NP K KR L
Sbjct: 10 RLRNLPVMGDGLETSQMSTTQAQAQPQSANAASTNPPPPETSNPNKPKRQTNQLQYLLRV 69
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y
Sbjct: 70 ---------VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW 120
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRG 294
QE +D F N +YN G + MAE L F Q +L ++ I+ GRG
Sbjct: 121 NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRG 180
Query: 295 KARE 298
+ R+
Sbjct: 181 RGRK 184
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
K + MS EEK L + +LP E+LG+++ I++ R SL + + DEIE+D E L
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLKNSNPDEIEIDFETLKPS 663
Query: 354 TLSQLVRFVDN-FKKAEKDKTEK 375
TL +L R+V + +K K + EK
Sbjct: 664 TLRELERYVTSCLRKKRKPQAEK 686
>gi|18308125|gb|AAL67833.1|AF461395_1 bromodomain-containing protein BRD4 long variant [Mus musculus]
Length = 1400
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 664
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 665 LRELERYVTSCLRKKRKPQAEK 686
>gi|449478032|ref|XP_002199360.2| PREDICTED: bromodomain-containing protein 3 [Taeniopygia guttata]
Length = 722
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y+
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LE+N + E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYFWSSSECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKAREMS 300
+ +YN + MA+ L F QK+++ Q + L +GK R+ S
Sbjct: 102 NTVLQSCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPVPKGKGRKPS 156
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 568 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 624
Query: 358 LVRFV 362
L R+V
Sbjct: 625 LERYV 629
>gi|226342873|ref|NP_065254.3| bromodomain-containing protein 4 isoform 1 [Mus musculus]
gi|148708379|gb|EDL40326.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
gi|148708382|gb|EDL40329.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
Length = 1400
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 664
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 665 LRELERYVTSCLRKKRKPQAEK 686
>gi|327288352|ref|XP_003228892.1| PREDICTED: bromodomain-containing protein 3-like [Anolis
carolinensis]
Length = 734
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y+
Sbjct: 316 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 375
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 376 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 419
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LE+N Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GKAR+
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPVPKGKARK 154
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 580 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 636
Query: 358 LVRFV 362
L R+V
Sbjct: 637 LERYV 641
>gi|126297864|ref|XP_001365890.1| PREDICTED: bromodomain-containing protein 3 [Monodelphis domestica]
Length = 724
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y+
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 140
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 570 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 626
Query: 358 LVRFV 362
L R+V
Sbjct: 627 LERYV 631
>gi|345306075|ref|XP_001505872.2| PREDICTED: bromodomain-containing protein 3 [Ornithorhynchus
anatinus]
Length = 724
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y+
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 154
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 570 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 626
Query: 358 LVRFV 362
L R+V
Sbjct: 627 LERYV 631
>gi|395506368|ref|XP_003757505.1| PREDICTED: bromodomain-containing protein 3 [Sarcophilus harrisii]
Length = 724
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y+
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 154
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 570 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 626
Query: 358 LVRFV 362
L R+V
Sbjct: 627 LERYV 631
>gi|449269062|gb|EMC79871.1| Bromodomain-containing protein 3 [Columba livia]
Length = 724
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y+
Sbjct: 310 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 369
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 370 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 413
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LE+N Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQDF 101
Query: 247 RLTFNNAL---VYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKAREM 299
F N L P V MA+ L F QK+++ Q + L +GK R+
Sbjct: 102 NTMFTNCLYLSFLQPTDDIVL-MAQALEKIF---LQKVAQMPQEEVELLPPVPKGKGRKP 157
Query: 300 S 300
S
Sbjct: 158 S 158
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 570 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 626
Query: 358 LVRFV 362
L R+V
Sbjct: 627 LERYV 631
>gi|432882591|ref|XP_004074106.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 823
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L +L+ K W F PVD VSL L DYH+IIK PMDL T++ K++ Y+
Sbjct: 392 LRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYR 451
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+F+ DVRL F+N YNP H V AMA L FE F K+
Sbjct: 452 EAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFCFAKM 495
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F+ PVD L L DYH IIK PMD+GT+R +LENN Y+ E +D
Sbjct: 85 VLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRLENNYYRSASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA++L F Q ++ +++
Sbjct: 145 NAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEE 183
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 665 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 721
Query: 358 LVRFV 362
L R+V
Sbjct: 722 LERYV 726
>gi|55296460|dbj|BAD68656.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
gi|55297001|dbj|BAD68476.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
Length = 360
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 110/231 (47%), Gaps = 50/231 (21%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NNV 235
+ MR+ G I+ ++ + F PVDVV L+L DY+ II KPMD T++ K+E +N
Sbjct: 91 DLMRQFGTIVRQITSHEWAEPFLKPVDVVGLQLDDYYKIITKPMDFSTIQKKMEGKDDNK 150
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE----QMFQKLSKQQQRQ--- 288
Y +E DVRL F NA+ YN + H V+ MA++L KFE Q+ K+ ++++Q
Sbjct: 151 YNNVREIYSDVRLIFANAMKYNDERHDVHIMAKSLLEKFEEKWLQLLPKVENEERKQKDE 210
Query: 289 ---GI----------------------------------LGRGKAREMSLEEKMALGRSL 311
G+ + K R+M+ EK LG L
Sbjct: 211 ESNGVPKVNISPEEAIAKLAKDTDNELIEINKQLEELRQMVVQKCRKMTTYEKRKLGAGL 270
Query: 312 EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
L EEL K L +V + N S GDE+ELD++A TL +L FV
Sbjct: 271 CHLSPEELTKALEMVAQDNP---SFEAKGDELELDMDAQSETTLWRLKFFV 318
>gi|118099425|ref|XP_425330.2| PREDICTED: bromodomain-containing protein 3 [Gallus gallus]
Length = 722
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y+
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LE+N Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKAREMSL 301
F N +YN + MA+ L F QK+++ Q + L +GK R+ S+
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPVPKGKGRKPSV 157
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 568 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 624
Query: 358 LVRFV 362
L R+V
Sbjct: 625 LERYV 629
>gi|18157527|dbj|BAB83842.1| RING3 [Oryzias latipes]
Length = 814
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L +L+ K W F PVD VSL L DYH+IIK PMDL T++ K++ Y+
Sbjct: 383 LRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYR 442
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+F+ DVRL F+N YNP H V AMA L FE F K+
Sbjct: 443 EAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFCFAKM 486
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F+ PVD L L DYH IIK PMD+GT+R +LENN Y+ E +D
Sbjct: 85 VLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRLENNYYRSASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA++L F Q ++ +++
Sbjct: 145 NAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEE 183
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 656 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 712
Query: 358 LVRFV 362
L R+V
Sbjct: 713 LERYV 717
>gi|125553971|gb|EAY99576.1| hypothetical protein OsI_21551 [Oryza sativa Indica Group]
gi|125595985|gb|EAZ35765.1| hypothetical protein OsJ_20055 [Oryza sativa Japonica Group]
Length = 344
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 110/231 (47%), Gaps = 50/231 (21%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NNV 235
+ MR+ G I+ ++ + F PVDVV L+L DY+ II KPMD T++ K+E +N
Sbjct: 75 DLMRQFGTIVRQITSHEWAEPFLKPVDVVGLQLDDYYKIITKPMDFSTIQKKMEGKDDNK 134
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE----QMFQKLSKQQQRQ--- 288
Y +E DVRL F NA+ YN + H V+ MA++L KFE Q+ K+ ++++Q
Sbjct: 135 YNNVREIYSDVRLIFANAMKYNDERHDVHIMAKSLLEKFEEKWLQLLPKVENEERKQKDE 194
Query: 289 ---GI----------------------------------LGRGKAREMSLEEKMALGRSL 311
G+ + K R+M+ EK LG L
Sbjct: 195 ESNGVPKVNISPEEAIAKLAKDTDNELIEINKQLEELRQMVVQKCRKMTTYEKRKLGAGL 254
Query: 312 EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
L EEL K L +V + N S GDE+ELD++A TL +L FV
Sbjct: 255 CHLSPEELTKALEMVAQ---DNPSFEAKGDELELDMDAQSETTLWRLKFFV 302
>gi|426020760|sp|D4A7T3.1|BRDT_RAT RecName: Full=Bromodomain testis-specific protein
Length = 952
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++ YK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYK 331
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V MA L FE F K+
Sbjct: 332 DACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 168 AAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTV 227
A T LT+ ++R +L L K W F PVD L+L DY+ II+ PMDL T+
Sbjct: 21 AKKTGRLTNQLQFLQRV--VLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTI 78
Query: 228 RSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
+ +LEN Y+ E D F+N +YN G + MA+ L F QKLS+ Q
Sbjct: 79 KKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLF---MQKLSQMPQE 135
Query: 288 QGILGRGKAREMSLEEKMALGRSLEELP 315
+ I+G + + +++K A+ + E+ P
Sbjct: 136 EQIVGGKERMKKDIQQKTAVSSAKEQTP 163
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ M+ +EK L + +LP ++LG+++ I++ R SL + + DEIE+D E L T
Sbjct: 502 AKPMNYDEKRQLSLDINKLPGDKLGRIVHIIQSREP---SLRNSNPDEIEIDFETLKAST 558
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 559 LRELEKYV 566
>gi|392352984|ref|XP_003751370.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
Length = 947
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++ YK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYK 331
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V MA L FE F K+
Sbjct: 332 DACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 168 AAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTV 227
A T LT+ ++R +L L K W F PVD L+L DY+ II+ PMDL T+
Sbjct: 21 AKKTGRLTNQLQFLQRV--VLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTI 78
Query: 228 RSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
+ +LEN Y+ E D F+N +YN G + MA+ L F QKLS+ Q
Sbjct: 79 KKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLF---MQKLSQMPQE 135
Query: 288 QGILGRGKAREMSLEEKMALGRSLEELP 315
+ I+G + + +++K A+ + E+ P
Sbjct: 136 EQIVGGKERMKKDIQQKTAVSSAKEQTP 163
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ M+ +EK L + +LP ++LG+++ I++ R SL + + DEIE+D E L T
Sbjct: 502 AKPMNYDEKRQLSLDINKLPGDKLGRIVHIIQSREP---SLRNSNPDEIEIDFETLKAST 558
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 559 LRELEKYV 566
>gi|326930474|ref|XP_003211372.1| PREDICTED: bromodomain-containing protein 3-like [Meleagris
gallopavo]
Length = 720
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y+
Sbjct: 308 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 367
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 368 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LE+N Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKAREMSL 301
F N +YN + MA+ L F QK+++ Q + L +GK R+ S+
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPVPKGKGRKPSV 157
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 568 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 624
Query: 358 LVRFV 362
L R+V
Sbjct: 625 LERYV 629
>gi|392332962|ref|XP_003752750.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
gi|149028625|gb|EDL83966.1| bromodomain, testis-specific [Rattus norvegicus]
Length = 947
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++ YK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYK 331
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL F N YNP H V MA L FE F K+
Sbjct: 332 DACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 168 AAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTV 227
A T LT+ ++R +L L K W F PVD L+L DY+ II+ PMDL T+
Sbjct: 21 AKKTGRLTNQLQFLQRV--VLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTI 78
Query: 228 RSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
+ +LEN Y+ E D F+N +YN G + MA+ L F QKLS+ Q
Sbjct: 79 KKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLF---MQKLSQMPQE 135
Query: 288 QGILGRGKAREMSLEEKMALGRSLEELP 315
+ I+G + + +++K A+ + E+ P
Sbjct: 136 EQIVGGKERMKKDIQQKTAVSSAKEQTP 163
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ M+ +EK L + +LP ++LG+++ I++ R SL + + DEIE+D E L T
Sbjct: 502 AKPMNYDEKRQLSLDINKLPGDKLGRIVHIIQSREP---SLRNSNPDEIEIDFETLKAST 558
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 559 LRELEKYV 566
>gi|159475920|ref|XP_001696062.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158275233|gb|EDP01011.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 798
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 108/242 (44%), Gaps = 42/242 (17%)
Query: 158 PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDI 217
P G P AKR + + ++ R CG + L+K K F PVD V + DY
Sbjct: 72 PAGIPDAKRPKLDSETDKKIQDIWRLCGSTVDYLLKKKNAQVFGRPVDPVRDGVPDYLKF 131
Query: 218 IKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
I PMDLGT+++KL Y P+EFA D+RL ++N YN G V + LS FE+
Sbjct: 132 ILHPMDLGTIKAKLRERRYNDPREFAADMRLVWSNCRTYNQIGTSVRQWGDQLSDDFERK 191
Query: 278 FQKLSKQQQRQGILGRGKAREMSLEEKMA------------------------------- 306
+ + +Q+ ++ + +SL+ ++A
Sbjct: 192 WADYNCEQRWDDLMATRDPQNVSLDRRIASSARQLLQRVNSVQLMQEADPTRAMTSVEKR 251
Query: 307 -LGRSLEELPQEELGKLLGIV----KKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRF 361
L +L EL ++L +L I+ K N + +EIELD++ LDN TL +L +
Sbjct: 252 KLSIALSELQGDQLADVLNIIAENLKDVNPDD------DEEIELDVDQLDNTTLWRLREY 305
Query: 362 VD 363
D
Sbjct: 306 CD 307
>gi|62122590|dbj|BAD93258.1| RING3 [Oryzias latipes]
Length = 814
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L +L+ K W F PVD VSL L DYH+IIK PMDL T++ K++ Y+
Sbjct: 383 LRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYR 442
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+F+ DVRL F+N YNP H V AMA L FE F K+
Sbjct: 443 EAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFCFAKM 486
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F+ PVD L L DYH IIK PMD+GT++ +LENN Y+ E +D
Sbjct: 85 VLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA++L F Q ++ +++
Sbjct: 145 NAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEE 183
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 656 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 712
Query: 358 LVRFV 362
L R+V
Sbjct: 713 LERYV 717
>gi|395730261|ref|XP_002810633.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Pongo abelii]
Length = 1038
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++ K++N YK
Sbjct: 344 LKHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 403
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F N YNP H V MA L FE F K+
Sbjct: 404 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 447
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN Y E ED
Sbjct: 111 VLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 170
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
F+N +YN G + MA+TL F QKLS+ Q + ++G GK R
Sbjct: 171 NTMFSNCYLYNKPGDDIVLMAQTLEKLF---MQKLSQMPQEEQVVG-GKER 217
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
A+ M+ +EK L ++ +LP ++LG+++ I++ R S + DEIE+D E L TL
Sbjct: 578 AKPMNYDEKRQLSLNINKLPGDKLGRVVRIIQSREPSLS--SSNPDEIEIDFETLKASTL 635
Query: 356 SQLVRFV 362
+L ++V
Sbjct: 636 RELEKYV 642
>gi|116283313|gb|AAH04832.1| Brd3 protein [Mus musculus]
Length = 501
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 157
>gi|21594670|gb|AAH32124.1| BRD3 protein [Homo sapiens]
gi|119608520|gb|EAW88114.1| bromodomain containing 3, isoform CRA_b [Homo sapiens]
Length = 556
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 158
>gi|327290160|ref|XP_003229792.1| PREDICTED: bromodomain-containing protein 2-like [Anolis
carolinensis]
Length = 794
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYH+IIK PMDL T++ K+EN Y+
Sbjct: 356 LKYCNGILKELVSKKHAAYAWPFYKPVDASALGLHDYHEIIKYPMDLSTIKRKMENRDYR 415
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V AMA L FE + K+
Sbjct: 416 DAQEFASDVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 459
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 83 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWSSAECMQDF 142
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ +++Q
Sbjct: 143 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPQEEQ 182
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
++R MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 627 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPS 683
Query: 354 TLSQLVRFV 362
TL +L R+V
Sbjct: 684 TLRELERYV 692
>gi|242091894|ref|XP_002436437.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
gi|241914660|gb|EER87804.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
Length = 346
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 50/231 (21%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN---NV 235
+ MR+ G +L ++ K W F PVDVV+L + DYH II +PMD T++ K+E
Sbjct: 78 DLMRQFGVLLKEITSHKDAWPFLKPVDVVTLHIPDYHKIITQPMDFSTIQKKMERKDGTC 137
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF----------QKLSKQQ 285
Y +E DVRL F NA+ YN + V+ MA++L KFE+ + +K K++
Sbjct: 138 YTNVREICSDVRLIFANAMKYNDDQNVVHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEE 197
Query: 286 QRQGILGRGKARE----------------------------------MSLEEKMALGRSL 311
+ +G+ +RE M+ +EK LG +
Sbjct: 198 ESKGVAATNTSREVAIAKLAKDTDDELNQINRKLEELRKMVVHRCRKMTTDEKRKLGAGI 257
Query: 312 EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
L ++L K L IV + N S +E++LD++A TL +L FV
Sbjct: 258 CHLSPDDLNKALEIVAQ---DNPSFQTKAEEVDLDMDAQSETTLWRLKFFV 305
>gi|344239383|gb|EGV95486.1| Bromodomain-containing protein 4 [Cricetulus griseus]
Length = 723
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSVILKEMFTKKHASYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKM 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQTKGRGRGRK 184
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 664
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 665 LRELERYVTSCLRKKRKPQAEK 686
>gi|27804346|gb|AAO22237.1| BRD4-NUT fusion oncoprotein [Homo sapiens]
Length = 1846
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
K + MS EEK L + +LP E+LG+++ I++ R SL + + DEIE+D E L
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLKNSNPDEIEIDFETLKPS 662
Query: 354 TLSQLVRFVDN-FKKAEKDKTEK 375
TL +L R+V + +K K + EK
Sbjct: 663 TLRELERYVTSCLRKKRKPQAEK 685
>gi|213983065|ref|NP_001135690.1| bromodomain containing 4 [Xenopus (Silurana) tropicalis]
gi|197245689|gb|AAI68637.1| Unknown (protein for MGC:186343) [Xenopus (Silurana) tropicalis]
Length = 1364
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 175 TSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL 231
+ T +R C I+ ++ K W F PVDV +L L DY +IIK PMDLGT++ K+
Sbjct: 373 SKTSEQLRYCAGIIREMFSKKHQAYAWPFYKPVDVDALGLHDYREIIKHPMDLGTIKVKM 432
Query: 232 ENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+N YK +EFA DVRL F+N YNP H V MA L FE + K+
Sbjct: 433 DNWDYKDAKEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRYAKM 482
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVDVV L L DYH IIK PMD+GT++ +LEN+ Y QE +D
Sbjct: 72 VLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKNPMDMGTIKKRLENHYYWNAQECIQDF 131
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAREMSLEE 303
F N +YN G + MAE L F Q ++ +++ ++ GRG+ R+ E+
Sbjct: 132 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMPQEETELAVVQSKGRGRGRKEQSEQ 191
Query: 304 KMAL 307
++
Sbjct: 192 DTSI 195
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
+ R MS EEK L + +LP E+LG+++ I++ R SL + + DEIE+D E L
Sbjct: 639 RCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLKNSNPDEIEIDFETLKPS 695
Query: 354 TLSQLVRFVDNF---KKAEKDKTE 374
TL +L R+V + K+ +DK E
Sbjct: 696 TLRELERYVTSCLRKKRKPQDKIE 719
>gi|397641904|gb|EJK74909.1| hypothetical protein THAOC_03385, partial [Thalassiosira oceanica]
Length = 273
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 90/165 (54%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F VD +L L DY IIK PMDLGTV+ K+ YK E +DVR + N + YN
Sbjct: 93 FREAVDWKTLGLFDYPQIIKHPMDLGTVKRKINEGKYKSLHEAGDDVRQIWKNCMTYNAD 152
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLEELPQEEL 319
G Y +AE+++ KFE FQKL Q G E ++EEK A +SL ++ +++L
Sbjct: 153 GSDFYNLAESMAKKFEDKFQKLLAQNDVATSQEGGVLDEPTIEEKRAFAKSLYKIEKDDL 212
Query: 320 GKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDN 364
GK++ ++ + + DE+E++++ + +LV FV++
Sbjct: 213 GKVVLDLENKCPAALLKNSAEDEVEINVDEITAAVFKELVEFVNS 257
>gi|26332152|dbj|BAC29806.1| unnamed protein product [Mus musculus]
Length = 511
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 157
>gi|242070257|ref|XP_002450405.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
gi|241936248|gb|EES09393.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
Length = 605
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 69/108 (63%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+R CG I+ KL+ K GW F PVD V + DY D+I PMDLGTV++KL Y +
Sbjct: 63 IRLCGNIVRKLIDHKGGWLFKEPVDPVLYGIPDYFDVIHNPMDLGTVKNKLTKKQYVSIE 122
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
EFA DVRLTF+NA+ YNP + V+ +A+ L+ F+ ++ + ++ + Q
Sbjct: 123 EFAADVRLTFSNAMKYNPPENDVHKVAKELNGIFDSEWESVERKFRVQ 170
>gi|183396808|ref|NP_001116861.1| bromodomain containing 3a [Danio rerio]
Length = 683
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y+
Sbjct: 296 LKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 355
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 356 DAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 399
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK PMD+GT++ +LE+ Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA+ L F Q
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQ 131
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 292 GRGKARE--------MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDE 342
GRG E M+ +EK L + LP E+LG+++ I++ R SL + DE
Sbjct: 560 GRGPGYESDEEMSLPMTYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDE 616
Query: 343 IELDIEALDNDTLSQLVRFV 362
IE+D E L TL +L R+V
Sbjct: 617 IEIDFETLKPSTLRELERYV 636
>gi|354485151|ref|XP_003504747.1| PREDICTED: bromodomain-containing protein 4 [Cricetulus griseus]
Length = 721
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSVILKEMFTKKHASYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKM 458
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQTKGRGRGRK 184
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 664
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 665 LRELERYVTSCLRKKRKPQAEK 686
>gi|301112310|ref|XP_002905234.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
gi|262095564|gb|EEY53616.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
Length = 2294
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 64/94 (68%)
Query: 188 LTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVR 247
L +M+ K GW FNTPVD V+L + +Y I++KPMDLGTV+ KLE +YK +EFA DVR
Sbjct: 1303 LRGMMEHKFGWVFNTPVDPVALNIPNYFKIVRKPMDLGTVKKKLELGIYKHTEEFAYDVR 1362
Query: 248 LTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
TF NA+ YN + VY++A+ + A F +K+
Sbjct: 1363 TTFQNAMQYNSEDQDVYSLAKDMLADFNSEMRKV 1396
>gi|414588437|tpg|DAA39008.1| TPA: hypothetical protein ZEAMMB73_513409 [Zea mays]
Length = 577
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+R CG I+ KL+ K GW F PVD + DY D+I+ PMDLGT+++KL Y +
Sbjct: 62 IRLCGNIVRKLIDHKCGWLFKEPVDPDLYGIPDYFDVIRSPMDLGTIKNKLTKKKYVSIE 121
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
EFA DVRLTF+NA+ YNP G+ V+ A+ L+ F+ ++ + ++
Sbjct: 122 EFAADVRLTFSNAMKYNPPGNDVHIFAKELNEMFDSEWESVERK 165
>gi|297466946|ref|XP_002704782.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
Length = 1368
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCNGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI 290
QEF DVRL F+N YNP H V AMA L FE F K+ + + +
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPAV 466
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIVIVQAKGRGRGR 183
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|297476378|ref|XP_002688607.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
gi|296486110|tpg|DAA28223.1| TPA: bromodomain containing 4 [Bos taurus]
Length = 1368
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCNGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI 290
QEF DVRL F+N YNP H V AMA L FE F K+ + + +
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPAV 466
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIVIVQAKGRGRGR 183
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|26345416|dbj|BAC36359.1| unnamed protein product [Mus musculus]
Length = 505
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 370
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 371 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 157
>gi|332253606|ref|XP_003275928.1| PREDICTED: bromodomain-containing protein 4 isoform 1 [Nomascus
leucogenys]
Length = 1364
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|357130613|ref|XP_003566942.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 215
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 90/187 (48%), Gaps = 22/187 (11%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
A RC E+L +L++ W F+ PVDV L + DY+ +I PMDLGTV S+L Y P
Sbjct: 33 AFDRCRELLDQLLQHDDAWVFDKPVDVYELGISDYYTMIPDPMDLGTVSSRLNRLRYADP 92
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE----QMFQKLSKQQQRQGILGRGK 295
+ FAEDVRLTF NA+ +N + VY A LS FE + +L+ Q
Sbjct: 93 RAFAEDVRLTFRNAMTFNDEDDAVYKSAAELSRIFESGWASILVELTPPQ---------- 142
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
LE L + LP GK + I+K+ G L E+D + D TL
Sbjct: 143 -----LERNKKLKEEMTRLPASWQGKAVAIMKE---IGGCLQEVNRWTEVDFDKADEATL 194
Query: 356 SQLVRFV 362
+L + V
Sbjct: 195 DKLEQLV 201
>gi|403308909|ref|XP_003944882.1| PREDICTED: bromodomain-containing protein 4 [Saimiri boliviensis
boliviensis]
Length = 1334
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 378 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 437
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 438 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 481
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 94 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 153
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 154 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 207
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 630 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 687
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 688 LRELERYVTSCLRKKRKPQAEK 709
>gi|291413178|ref|XP_002722853.1| PREDICTED: bromodomain-containing protein 4 [Oryctolagus cuniculus]
Length = 1346
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|148676421|gb|EDL08368.1| bromodomain containing 3, isoform CRA_c [Mus musculus]
Length = 516
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 316 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 375
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 376 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 419
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 50 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 109
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 110 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 162
>gi|167515986|ref|XP_001742334.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778958|gb|EDQ92572.1| predicted protein [Monosiga brevicollis MX1]
Length = 497
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
MR C +I+ L K W F PVD+V L + DY+D+IK+PMDLGTVR+KLE Y+
Sbjct: 247 MRVCYDIIKDLFGKKHQAYAWPFYEPVDIVKLNIPDYYDVIKQPMDLGTVRTKLEEGEYE 306
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
+FA DVRL F N YNP G V MA++ S FE +
Sbjct: 307 TRDDFAHDVRLVFANCYTYNPPGSDVVKMAKSTSEVFELQW 347
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 167 AAAGTXSLTSTKNAMRRCGE-ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLG 225
+A GT N ++ + IL L K W F PVD L L Y +II PMDLG
Sbjct: 72 SAGGTPRTGRMTNQLQYISKVILPTLNKHPSAWPFKKPVDWKKLGLLSYPEIIANPMDLG 131
Query: 226 TVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
T+R+KL Y +E +D+ L ++N +N VY M++ L + ++QM L
Sbjct: 132 TIRNKLRKKEYFSGRECLDDIELVWHNCQTFNRPSDDVYIMSQALESDYKQMLANL 187
>gi|63100514|gb|AAH95027.1| Brd3a protein [Danio rerio]
Length = 513
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y+
Sbjct: 296 LKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 355
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 356 DAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 399
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK PMD+GT++ +LE+ Y E +D
Sbjct: 42 VVETLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA+ L F Q
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQ 131
>gi|402904600|ref|XP_003915131.1| PREDICTED: bromodomain-containing protein 4 [Papio anubis]
Length = 1300
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|148708381|gb|EDL40328.1| bromodomain containing 4, isoform CRA_c [Mus musculus]
Length = 734
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 366 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 425
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 426 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 469
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 81 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 140
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 141 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 195
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 618 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 675
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 676 LRELERYVTSCLRKKRKPQAEK 697
>gi|426387578|ref|XP_004060242.1| PREDICTED: bromodomain-containing protein 4 [Gorilla gorilla
gorilla]
Length = 1362
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|149034726|gb|EDL89463.1| bromodomain containing 4, isoform CRA_b [Rattus norvegicus]
Length = 723
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Query: 123 RVRNL---GSRIANSDFQATHAYPTTKSQNRGGSKRANP-FGNP-KAKRAAAGTXSLTST 177
R+RNL G + S T A +S N + P NP K KR L
Sbjct: 10 RLRNLPVMGDGLETSQMSTTQAQAQPQSANAASTNPPPPETSNPNKPKRQTNQLQYLLRV 69
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y
Sbjct: 70 ---------VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW 120
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRG 294
QE +D F N +YN G + MAE L F Q +L ++ I+ GRG
Sbjct: 121 NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRG 180
Query: 295 KARE 298
+ R+
Sbjct: 181 RGRK 184
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 664
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 665 LRELERYVTSCLRKKRKPQAEK 686
>gi|397484965|ref|XP_003813634.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Pan paniscus]
Length = 1362
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|297703913|ref|XP_002828869.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Pongo
abelii]
Length = 1363
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|194223682|ref|XP_001914731.1| PREDICTED: bromodomain-containing protein 4 [Equus caballus]
Length = 1364
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|19718731|ref|NP_490597.1| bromodomain-containing protein 4 isoform long [Homo sapiens]
gi|20141192|sp|O60885.2|BRD4_HUMAN RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Protein HUNK1
gi|16589003|gb|AAL26987.1|AF386649_1 bromodomain-containing 4 [Homo sapiens]
gi|119604879|gb|EAW84473.1| bromodomain containing 4, isoform CRA_d [Homo sapiens]
Length = 1362
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|281343180|gb|EFB18764.1| hypothetical protein PANDA_018131 [Ailuropoda melanoleuca]
Length = 1230
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|226246640|ref|NP_932762.2| bromodomain-containing protein 4 isoform 2 [Mus musculus]
gi|148708380|gb|EDL40327.1| bromodomain containing 4, isoform CRA_b [Mus musculus]
gi|187951219|gb|AAI38836.1| Bromodomain containing 4 [Mus musculus]
gi|187952057|gb|AAI38835.1| Bromodomain containing 4 [Mus musculus]
Length = 723
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 664
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 665 LRELERYVTSCLRKKRKPQAEK 686
>gi|18308127|gb|AAL67834.1|AF461396_1 bromodomain-containing protein BRD4 short variant [Mus musculus]
Length = 723
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 664
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 665 LRELERYVTSCLRKKRKPQAEK 686
>gi|432109400|gb|ELK33657.1| Bromodomain-containing protein 4 [Myotis davidii]
Length = 1183
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 351 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 410
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 411 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 454
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVPAKGRGRGRK 184
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 603 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 660
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 661 LRELERYVTSCLRKKRKPQAEK 682
>gi|395847805|ref|XP_003796555.1| PREDICTED: bromodomain-containing protein 4 [Otolemur garnettii]
Length = 1366
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|325652134|ref|NP_001191701.1| bromodomain-containing protein 4 [Sus scrofa]
gi|321172828|gb|ADW77216.1| bromodomain-containing protein 4 [Sus scrofa]
Length = 1368
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAREMSLEE 303
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+ ++
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKEAVSA 189
Query: 304 K 304
K
Sbjct: 190 K 190
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K R MS +EK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|33416865|gb|AAH55543.1| Brd3a protein [Danio rerio]
Length = 515
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y+
Sbjct: 295 LKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYQ 354
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 355 DAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 398
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK PMD+GT++ +LE+ Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA+ L F Q
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQ 131
>gi|380792435|gb|AFE68093.1| bromodomain-containing protein 3, partial [Macaca mulatta]
Length = 508
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 312 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 372 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKAREMS 300
F N +YN + MA+ L F QK+++ Q + L +GK R+ S
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRKPS 160
>gi|52350614|gb|AAH82782.1| Brd4 protein, partial [Mus musculus]
Length = 582
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
>gi|426230380|ref|XP_004009251.1| PREDICTED: bromodomain-containing protein 4 [Ovis aries]
Length = 1225
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 352 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 411
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI 290
QEF DVRL F+N YNP H V AMA L FE F K+ + + +
Sbjct: 412 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPAV 464
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIVIVQAKGRGRGR 183
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 604 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 661
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 662 LRELERYVTSCLRKKRKPQAEK 683
>gi|71681018|gb|AAI00642.1| Brd4 protein, partial [Rattus norvegicus]
Length = 566
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Query: 123 RVRNL---GSRIANSDFQATHAYPTTKSQNRGGSKRANP-FGNP-KAKRAAAGTXSLTST 177
R+RNL G + S T A +S N + P NP K KR L
Sbjct: 10 RLRNLPVMGDGLETSQMSTTQAQAQPQSANAASTNPPPPETSNPNKPKRQTNQLQYLLRV 69
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y
Sbjct: 70 ---------VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW 120
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRG 294
QE +D F N +YN G + MAE L F Q +L ++ I+ GRG
Sbjct: 121 NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRG 180
Query: 295 KARE 298
+ R+
Sbjct: 181 RGRK 184
>gi|325190099|emb|CCA24581.1| histone acetyltransferase putative [Albugo laibachii Nc14]
Length = 2117
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 3/127 (2%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
+R +L +M+ K GW F++PVD V+L + DY I++PMDLGT++ KL+ YK Q
Sbjct: 1095 KRLEVLLKGMMEHKFGWVFSSPVDTVALEIPDYFRTIRRPMDLGTIKKKLDLGFYKHIQH 1154
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLS---KQQQRQGILGRGKARE 298
FA DVRLTFNNA +YN +G V+ +A+ + F F+KL +Q+R L R
Sbjct: 1155 FASDVRLTFNNAKLYNSEGSDVHNLAKDMLNDFNVEFRKLEIDINEQERLQRLKEAACRL 1214
Query: 299 MSLEEKM 305
+E +
Sbjct: 1215 CGVERML 1221
>gi|410053415|ref|XP_512452.4| PREDICTED: bromodomain-containing protein 4 [Pan troglodytes]
Length = 1161
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
>gi|345787686|ref|XP_541985.3| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
isoform 1 [Canis lupus familiaris]
Length = 1360
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|301785596|ref|XP_002928216.1| PREDICTED: bromodomain-containing protein 4-like [Ailuropoda
melanoleuca]
Length = 1260
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|74354344|gb|AAI03774.1| Brd4 protein, partial [Mus musculus]
Length = 557
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
>gi|74181884|dbj|BAE32643.1| unnamed protein product [Mus musculus]
Length = 545
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 355 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 415 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
>gi|348686369|gb|EGZ26184.1| hypothetical protein PHYSODRAFT_483048 [Phytophthora sojae]
Length = 2258
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 69/110 (62%)
Query: 175 TSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENN 234
S N ++ IL +M K GW FNTPVD V+L + +Y II+KPMDLGTV+ KLE
Sbjct: 1263 VSPANLKKKLEVILKGMMDHKFGWVFNTPVDPVALNIPNYFKIIRKPMDLGTVKKKLEAG 1322
Query: 235 VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
+YK EFA +VR TF NA+ YN + VY++A+ + + F +K++ +
Sbjct: 1323 IYKHTDEFANEVRTTFENAMQYNSEDQDVYSLAKDMLSDFNGEMRKVAAE 1372
>gi|296191127|ref|XP_002743521.1| PREDICTED: bromodomain-containing protein 3 [Callithrix jacchus]
Length = 1364
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 953 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 1012
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 1013 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 1056
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 687 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 746
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 747 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 785
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 1210 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 1266
Query: 358 LVRFVDNFKKAEKDK 372
L R+V + + ++ K
Sbjct: 1267 LERYVKSCLQKKQRK 1281
>gi|148725668|emb|CAN87976.1| novel protein (zgc:77289) [Danio rerio]
Length = 664
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYH+IIK+PMDL TV+ K+++ Y
Sbjct: 295 LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYP 354
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 355 DAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F TPVD + L L DYH +IK PMD+GT++ +LENN Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GKAR+
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPPPKGKARK 154
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 552 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPSTLRE 608
Query: 358 LVRFV 362
L R+V
Sbjct: 609 LERYV 613
>gi|148725667|emb|CAN87975.1| novel protein (zgc:77289) [Danio rerio]
Length = 729
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYH+IIK+PMDL TV+ K+++ Y
Sbjct: 295 LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYP 354
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 355 DAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F TPVD + L L DYH +IK PMD+GT++ +LENN Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GKAR+
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPPPKGKARK 154
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 575 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPSTLRE 631
Query: 358 LVRFV 362
L R+V
Sbjct: 632 LERYV 636
>gi|84579095|dbj|BAE72981.1| hypothetical protein [Macaca fascicularis]
Length = 617
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 250 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 309
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 310 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 353
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MD+GT++ +LENN Y QE +D F N +YN G + MAE L F Q +L
Sbjct: 1 MDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 60
Query: 282 SKQQQRQGIL---GRGKAR 297
++ I+ GRG+ R
Sbjct: 61 PTEETEIMIVQAKGRGRGR 79
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 501 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 558
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 559 LRELERYVTSCLRKKRKPQAEK 580
>gi|383417065|gb|AFH31746.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
gi|387541550|gb|AFJ71402.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
Length = 721
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 662
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 663 LRELERYVTSCLRKKRKPQAEK 684
>gi|344283171|ref|XP_003413346.1| PREDICTED: bromodomain-containing protein 4-like [Loxodonta
africana]
Length = 965
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWRHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
+ + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 RCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|332253608|ref|XP_003275929.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Nomascus
leucogenys]
Length = 722
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|432910838|ref|XP_004078550.1| PREDICTED: bromodomain-containing protein 2-like [Oryzias latipes]
Length = 830
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L ++ K W F TPVD +L L DYHDIIK PMDL T++ K++ Y+
Sbjct: 386 LRYCSGLLKDMLSKKHAAYAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKMDCREYR 445
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
Q+FA DVRL F+N YNP H V MA L FE F K+ + Q
Sbjct: 446 DAQQFASDVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFSFAKMPDEPQ 494
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 164 AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMD 223
A R T L + + +C L + + W F+ PVD L+L DY+ IIK+PMD
Sbjct: 79 ASRPGRMTNQLQYLQKTLMKC------LWRHEFAWPFHEPVDAYRLKLPDYYKIIKQPMD 132
Query: 224 LGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
+GT++ +LEN+ Y+ E +D F N +YN + MA++L F Q ++ +
Sbjct: 133 MGTIKKRLENSFYRSASECIQDFNTMFTNCYIYNKPKDDIVLMAQSLEKIFLQKVAQMPQ 192
Query: 284 QQ 285
++
Sbjct: 193 EE 194
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 671 MTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDTNPEEIEIDFETLKPSTLKE 727
Query: 358 LVRFV 362
L R+V
Sbjct: 728 LERYV 732
>gi|3184498|gb|AAC27978.1| R31546_1 [Homo sapiens]
Length = 731
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 365 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 424
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 425 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 468
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 81 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 140
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 141 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 195
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 617 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 674
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 675 LRELERYVTSCLRKKRKPQAEK 696
>gi|71052031|gb|AAH35266.1| BRD4 protein [Homo sapiens]
gi|119604876|gb|EAW84470.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
gi|119604877|gb|EAW84471.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
Length = 794
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|308198663|pdb|3ONI|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd2
In Complex With The Inhibitor Jq1
Length = 114
Score = 99.4 bits (246), Expect = 4e-18, Method: Composition-based stats.
Identities = 52/112 (46%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Query: 173 SLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRS 229
S+ ++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+
Sbjct: 1 SMGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKR 60
Query: 230 KLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K+EN Y+ QEFA DVRL F+N YNP H V AMA L FE + K+
Sbjct: 61 KMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 112
>gi|7657218|ref|NP_055114.1| bromodomain-containing protein 4 isoform short [Homo sapiens]
gi|3115204|emb|CAA72780.1| HUNKI [Homo sapiens]
gi|119604875|gb|EAW84469.1| bromodomain containing 4, isoform CRA_a [Homo sapiens]
gi|410224242|gb|JAA09340.1| bromodomain containing 4 [Pan troglodytes]
gi|410259614|gb|JAA17773.1| bromodomain containing 4 [Pan troglodytes]
gi|410299992|gb|JAA28596.1| bromodomain containing 4 [Pan troglodytes]
Length = 722
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|390352946|ref|XP_003728004.1| PREDICTED: uncharacterized protein LOC100892105 [Strongylocentrotus
purpuratus]
Length = 1350
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C ++ +LM K W F PVD L L DYH+IIK PMD+GTV+ KLEN YK
Sbjct: 360 LKYCYGVIKELMSKKHSAYAWPFFKPVDADVLGLHDYHEIIKTPMDMGTVKVKLENRDYK 419
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA +VRL F N YNP H V MA L FE F K+
Sbjct: 420 NANDFAANVRLIFTNCYKYNPPDHDVVGMARKLQNVFEVKFAKM 463
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 47/88 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F+ PVD L L DY IIK PMDLGT++ +LE+ Y +E D
Sbjct: 47 VMKALWKHQFAWPFHHPVDPTKLALLDYFKIIKTPMDLGTIKKRLESIYYHSAKECISDF 106
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
L F N VYN G V MA+ L F
Sbjct: 107 NLMFTNCYVYNKPGEDVVLMAQALEKLF 134
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LGK++ I++ R SL DEIE+D E L T
Sbjct: 663 AKPMSYDEKRQLSLDINKLPGDKLGKVVHIIQSREP---SLKDSTPDEIEIDFETLKPST 719
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 720 LRELEKYV 727
>gi|47086635|ref|NP_997867.1| bromodomain-containing protein 3 [Danio rerio]
gi|41944567|gb|AAH65949.1| Bromodomain containing 3b [Danio rerio]
Length = 664
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYH+IIK+PMDL TV+ K+++ Y
Sbjct: 295 LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYP 354
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 355 DAQNFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F TPVD + L L DYH +IK PMD+GT++ +LENN Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GKAR+
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPPPKGKARK 154
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 552 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPSTLRE 608
Query: 358 LVRFV 362
L R+V
Sbjct: 609 LERYV 613
>gi|444519215|gb|ELV12653.1| Guanine nucleotide exchange factor VAV2 [Tupaia chinensis]
Length = 1580
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K+++ Y
Sbjct: 265 LRYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYP 324
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 325 DAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 368
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 525 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 581
Query: 358 LVRFV 362
L R+V
Sbjct: 582 LERYV 586
>gi|157834826|pdb|2DVV|A Chain A, Crystal Structure Of The Second Bromodomain Of The Human
Brd2 Protein
gi|162329881|pdb|2E3K|A Chain A, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329882|pdb|2E3K|B Chain B, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329883|pdb|2E3K|C Chain C, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329884|pdb|2E3K|D Chain D, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
Length = 112
Score = 99.0 bits (245), Expect = 4e-18, Method: Composition-based stats.
Identities = 51/104 (49%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 7 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 66
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V AMA L FE + K+
Sbjct: 67 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 110
>gi|348511137|ref|XP_003443101.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 819
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L ++ K W F TPVD +L L DYHDIIK PMDL T++ K++ Y+
Sbjct: 373 LRYCSGLLKDMLSKKHAAYAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKMDCREYR 432
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA DVRL F+N YNP H V MA L FE F K+
Sbjct: 433 DAQQFASDVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFRFAKM 476
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + W F PVD L L DYH IIK+PMD+GT++ +LENN Y+ E +D
Sbjct: 82 LMKSLWRHHFAWPFQEPVDAYKLNLPDYHKIIKQPMDMGTIKKRLENNFYRSASECIQDF 141
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA++L F Q
Sbjct: 142 NTMFTNCYIYNKPTDDIVLMAQSLEKIFLQ 171
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 661 MSYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDTNPEEIEIDFETLKPSTLKE 717
Query: 358 LVRFV 362
L R+V
Sbjct: 718 LERYV 722
>gi|410950660|ref|XP_003982021.1| PREDICTED: bromodomain-containing protein 4 [Felis catus]
Length = 720
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|185134173|ref|NP_001117185.1| bromodomain containing 2 [Salmo salar]
gi|148362162|gb|ABQ59684.1| BRD2 [Salmo salar]
Length = 815
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +L+ K W F PVD L L DYHDIIK+PMDL T++ K+++ Y+
Sbjct: 378 LRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYR 437
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA DVR+ ++N YNP H V AMA L FE F K+
Sbjct: 438 DAQQFAGDVRIMYSNCYKYNPPDHDVVAMARKLQDVFEFCFAKM 481
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 155 RANPFGNPK-----AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSL 209
+A P G+P+ R T L + AM + L + W F+ PVD L
Sbjct: 57 QAPPSGSPRPLVHDTNRQGRATNQLQFLQRAM------MKYLWRHHFAWPFHEPVDASKL 110
Query: 210 RLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAET 269
L DYH IIK+PMD+GT++ +LENN Y+ E +D F N +YN + MA++
Sbjct: 111 SLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQS 170
Query: 270 LSAKFEQMFQKLSKQQ 285
L F Q ++ +++
Sbjct: 171 LEKAFLQKVAQMPQEE 186
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 661 MSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDTNPEEIEIDFETLKPSTLRE 717
Query: 358 LVRFV 362
L R+V
Sbjct: 718 LERYV 722
>gi|380792783|gb|AFE68267.1| bromodomain-containing protein 4 isoform short, partial [Macaca
mulatta]
Length = 553
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
>gi|387014800|gb|AFJ49519.1| bromodomain-containing protein 2-like [Crotalus adamanteus]
Length = 715
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ + W F PVD +L L DYH+IIK PMDL +++ K+EN Y+
Sbjct: 355 LKYCNGILKELVSKRHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSSIKRKMENREYR 414
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V AMA L FE + K+
Sbjct: 415 DAQEFASDVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 458
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LEN Y E +D
Sbjct: 87 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENGYYWSSGECMQDF 146
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ +++Q
Sbjct: 147 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPQEEQ 186
>gi|45501005|gb|AAH67129.1| BRD4 protein, partial [Homo sapiens]
gi|116283901|gb|AAH47888.1| BRD4 protein [Homo sapiens]
Length = 548
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
>gi|60649450|gb|AAH91649.1| BRD4 protein, partial [Homo sapiens]
Length = 550
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
>gi|146147391|gb|ABQ01994.1| bromodomain containing 2 [Salmo salar]
gi|148362147|gb|ABQ59670.1| BRD2 [Salmo salar]
Length = 815
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +L+ K W F PVD L L DYHDIIK+PMDL T++ K+++ Y+
Sbjct: 378 LRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYR 437
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA DVR+ ++N YNP H V AMA L FE F K+
Sbjct: 438 DAQQFAGDVRIMYSNCYKYNPPDHDVVAMARKLQDVFEFCFAKM 481
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 155 RANPFGNPK-----AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSL 209
+A P G+P+ R T L + AM + L + W F+ PVD L
Sbjct: 57 QAPPSGSPRPLVHDTNRQGRATNQLQFLQRAM------MKYLWRHHFAWPFHEPVDASKL 110
Query: 210 RLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAET 269
L DYH IIK+PMD+GT++ +LENN Y+ E +D F N +YN + MA++
Sbjct: 111 SLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQS 170
Query: 270 LSAKFEQMFQKLSKQQ 285
L F Q ++ +++
Sbjct: 171 LEKAFLQKVAQMPQEE 186
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 661 MSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDTNPEEIEIDFETLKPSTLRE 717
Query: 358 LVRFV 362
L R+V
Sbjct: 718 LERYV 722
>gi|116283228|gb|AAH00156.1| BRD4 protein [Homo sapiens]
gi|116283846|gb|AAH38988.1| BRD4 protein [Homo sapiens]
Length = 549
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
>gi|33879612|gb|AAH30158.1| BRD4 protein, partial [Homo sapiens]
Length = 548
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 413
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 414 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
>gi|355673426|gb|AER95168.1| bromodomain containing 4 [Mustela putorius furo]
Length = 551
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 364 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 423
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 424 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 80 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 139
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 140 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 194
>gi|159164570|pdb|2G4A|A Chain A, Solution Structure Of A Bromodomain From Ring3 Protein
Length = 116
Score = 99.0 bits (245), Expect = 5e-18, Method: Composition-based stats.
Identities = 51/104 (49%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVD +L L DYHDIIK PMDL TV+ K+EN Y+
Sbjct: 3 LKHCNVILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 62
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F+N YNP H V AMA L FE + K+
Sbjct: 63 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 106
>gi|198282051|ref|NP_001128282.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
gi|197245764|gb|AAI68574.1| brd2 protein [Xenopus (Silurana) tropicalis]
Length = 758
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVDV +L L DY+DIIK PMDL T++ K++N +K
Sbjct: 324 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNREFK 383
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA VRL F+N YNP H V AMA L FE + K+
Sbjct: 384 DAQEFAAAVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 427
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 66 VMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRLENNYYWSALECMQDF 125
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA++L F Q ++ +++Q
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQMPQEEQ 165
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L T
Sbjct: 588 SKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPST 644
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 645 LRELERYV 652
>gi|301118949|ref|XP_002907202.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105714|gb|EEY63766.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 786
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 109/245 (44%), Gaps = 63/245 (25%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+M++C IL LM + + F PVD V+L + DY +IK+PMDLGT+R+ LE+ Y P
Sbjct: 276 SMKKCLSILKGLMANPKAAPFMAPVDPVALGIPDYFHVIKEPMDLGTIRNNLESGFYDSP 335
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ---KLSKQQQRQGILGRGKA 296
+FAE VRLTF NA +YN V+ A L FE+ F+ S ++ R G +G
Sbjct: 336 SDFAEHVRLTFRNATLYNAAHSQVHIYARKLVDDFEKRFKTDGTYSSKKVRGGKGTKGNT 395
Query: 297 RE----------MSLEEKMA-LGRSLEEL------------------------------- 314
+ MSL+E + L +LE+L
Sbjct: 396 KRQTSGEDNGLIMSLKEDIERLKATLEQLQPAMAKAVASKSAKAAKPFKMDDLTEEELNE 455
Query: 315 -----------------PQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQ 357
PQ+++ ++L I+ + +L+ DE+ELDI A D L
Sbjct: 456 PMSQMDKARLSSDIKLLPQDKINRVLQIIAE-AVPVANLANENDEVELDINAFDTRCLRM 514
Query: 358 LVRFV 362
L +V
Sbjct: 515 LEGYV 519
>gi|327270741|ref|XP_003220147.1| PREDICTED: bromodomain testis-specific protein-like [Anolis
carolinensis]
Length = 900
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
Query: 160 GNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHD 216
G P ++ T ++ T+ +++ C EILT++ + W F P+DV + L DY+D
Sbjct: 298 GLPDSQHPPEPTKNIKLTE-SLKYCNEILTEMFSKQHEAYAWLFYKPIDVTAPGLEDYND 356
Query: 217 IIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
++K PMDLGT++ K+ENN YK QEFA D+RL F N Y+ V MA L FE
Sbjct: 357 VVKCPMDLGTIKKKMENNAYKDTQEFAADIRLMFMNCYRYSSPDQEVVTMARKLQDVFEM 416
Query: 277 MFQKLSKQQQRQGILGRGKAREM 299
F K+ + L AR M
Sbjct: 417 HFAKIPDEPTSHKPLLYSTARPM 439
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 170 GTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRS 229
GT LT+ +++ ++ + + W F+ PVD L+L DY++IIK PMDL T++
Sbjct: 67 GTGRLTNQLQYLQKV--VMKAMWRHSFSWPFHQPVDAAGLKLPDYYNIIKNPMDLTTIQK 124
Query: 230 KLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQG 289
+LE+N Y C E E+ + F N +YN G + MA+ L F Q ++ +++
Sbjct: 125 RLEHNYYTCAAECIENFKTMFANCYLYNKPGDDIVFMAQELEKVFMQKIAQMP-LEEKII 183
Query: 290 ILGRGKAREMSLE 302
++ +GK + + E
Sbjct: 184 VINQGKRKRKTTE 196
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 271 SAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRN 330
S K +Q + + K + + A+ MS +EK L + +LP E LG+++ I++ R
Sbjct: 533 SKKIKQQDEPMYKSEDDES------AKPMSYDEKRQLSLDINKLPGERLGRVVHIIQSRE 586
Query: 331 SGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
G + EIE+D E L TL +L ++V
Sbjct: 587 PSLG--HSNPGEIEIDFETLKASTLRELEKYV 616
>gi|156230233|gb|AAI51887.1| Brd3b protein [Danio rerio]
Length = 500
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYH+IIK+PMDL TV+ K+++ Y
Sbjct: 295 LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYP 354
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 355 DAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F TPVD + L L DYH +IK PMD+GT++ +LENN Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GKAR+
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPPPKGKARK 154
>gi|224013794|ref|XP_002296561.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968913|gb|EED87257.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 89
Score = 98.6 bits (244), Expect = 6e-18, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 61/89 (68%)
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAED 245
++L L GW FN+PVD V L L DY ++IK PMDLGTV+ +LEN +Y+ E D
Sbjct: 1 DLLKGLSNHNHGWVFNSPVDPVELGLPDYFEVIKNPMDLGTVKKRLENGLYRSINEVEVD 60
Query: 246 VRLTFNNALVYNPKGHYVYAMAETLSAKF 274
+ LTF+NA++YNP+G V++MA+ L KF
Sbjct: 61 INLTFDNAMLYNPEGSVVWSMAKELKDKF 89
>gi|379642603|ref|NP_001243832.1| bromodomain containing 3 [Xenopus (Silurana) tropicalis]
Length = 795
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL +V+ K++ Y
Sbjct: 364 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDAREYA 423
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 424 DAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 102 NTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEE 140
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 642 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 698
Query: 358 LVRFV 362
L R+V
Sbjct: 699 LERYV 703
>gi|348505480|ref|XP_003440289.1| PREDICTED: bromodomain-containing protein 3-like [Oreochromis
niloticus]
Length = 513
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L+L DYHDIIK PMDL TV+ K++ Y+
Sbjct: 190 LKYCNHILKEMLSKKHSAYAWPFYKPVDAEALQLHDYHDIIKYPMDLSTVKKKMDAGEYQ 249
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V A L FEQ F K+
Sbjct: 250 DAQAFAADVRLIFSNCYKYNPAHHDVVIKARKLQGIFEQRFAKM 293
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + + W F PVD V+L L DYH II PMD+GT++ +LENN Y E +D
Sbjct: 40 VIKSLWRHQFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRLENNYYWSASECLQDF 99
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA L + Q
Sbjct: 100 NTMFTNCYIYNKPTDDIVLMALALEKIYLQ 129
>gi|443691011|gb|ELT92995.1| hypothetical protein CAPTEDRAFT_169335 [Capitella teleta]
Length = 1173
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C ++ +L K W F PVD L L DYH++IK+PMDLG++R KLE Y+
Sbjct: 325 MKYCSGVIKELFAKKHAGYAWPFYKPVDADLLGLHDYHEMIKRPMDLGSIRQKLETREYE 384
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P EFAE+VRL F N YNP V MA+ L FE + ++
Sbjct: 385 SPAEFAEEVRLIFTNCYRYNPPESDVVMMAKKLQDVFEMRYARM 428
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F+TPVD V L L DY+ IIK PMD+GT++ +LEN Y QE +D
Sbjct: 54 VLKALWKHQFSWPFHTPVDAVKLNLHDYYKIIKHPMDMGTIKKRLENQYYHRAQECIQDW 113
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
F N YN G + M + + +F
Sbjct: 114 NQMFTNCYTYNKAGEDITVMCQAVEKQF 141
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 585 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP---SLKDSNPDEIEIDFETLKPST 641
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEP 377
L +L +V + KK + T+++P
Sbjct: 642 LRELEAYVMSCLKKKPRRPYTKRQP 666
>gi|148235897|ref|NP_001090595.1| bromodomain containing 3 [Xenopus laevis]
gi|120537384|gb|AAI29055.1| LOC100036838 protein [Xenopus laevis]
Length = 783
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL +V+ K++ Y
Sbjct: 353 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKNPMDLSSVKRKMDGREYA 412
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 413 DAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 456
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK PMD+GT++ +LE+N Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDCVKLSLPDYHKIIKNPMDMGTIKKRLESNYYWSANECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 102 NTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEE 140
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
M+ +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 629 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 685
Query: 358 LVRFV 362
L R+V
Sbjct: 686 LERYV 690
>gi|348541135|ref|XP_003458042.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 821
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
MR C +L +L+ K W F PVD SL L DYHDIIK+PMDL T++ K++ Y+
Sbjct: 390 MRYCSGVLKELLSKKHAAYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDGREYR 449
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+F+ DVRL F+N YNP H V AMA L FE K+
Sbjct: 450 EAHQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFCIAKM 493
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F+ PVD V L L DYH IIK PMD+GT++ +LENN Y+ E +D
Sbjct: 87 LLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 146
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA++L F Q
Sbjct: 147 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQ 176
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 664 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 720
Query: 358 LVRFV 362
L R+V
Sbjct: 721 LERYV 725
>gi|33416361|gb|AAH55533.1| Brd3b protein [Danio rerio]
Length = 499
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYH+IIK+PMDL TV+ K+++ Y
Sbjct: 295 LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYP 354
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 355 DAQNFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F TPVD + L L DYH +IK PMD+GT++ +LENN Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GKAR+
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPPPKGKARK 154
>gi|156914867|gb|AAI52645.1| Brd3b protein [Danio rerio]
gi|163916192|gb|AAI57602.1| LOC100135304 protein [Xenopus (Silurana) tropicalis]
Length = 483
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYH+IIK+PMDL TV+ K+++ Y
Sbjct: 295 LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYP 354
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 355 DAQNFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F TPVD + L L DYH +IK PMD+GT++ +LENN Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GKAR+
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPPPKGKARK 154
>gi|115530796|emb|CAL49346.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
Length = 529
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVDV +L L DY+DIIK PMDL T++ K++N +K
Sbjct: 344 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNREFK 403
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA VRL F+N YNP H V AMA L FE + K+
Sbjct: 404 DAQEFAAAVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 447
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 86 VMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRLENNYYWSALECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA++L F Q ++ +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQMPQEEQ 185
>gi|384247311|gb|EIE20798.1| hypothetical protein COCSUDRAFT_43706 [Coccomyxa subellipsoidea
C-169]
Length = 534
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 98/229 (42%), Gaps = 53/229 (23%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
++C +L ++ K W F PVD+ R DY +++K PMDL V+ K+E Y P E
Sbjct: 91 KQCMSVLKSILAHKWAWPFADPVDLA--RYADYLNVVKSPMDLKWVKRKVEGGQYATPAE 148
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF----------------------- 278
FA D RL F NA YNP G VY MA TL A+FE +
Sbjct: 149 FAADFRLVFANAHTYNPPGTDVYVMASTLLARFEDKWNSVVVPKLIEAEVASRSDEAAVR 208
Query: 279 QKLSKQ-QQRQGILGRGKA-------------------------REMSLEEKMALGRSLE 312
++LS+ R G RG+A + MS+ K L +
Sbjct: 209 ERLSESANARAGEALRGEAARLKGHFETLEARIAESKSLAAAACQPMSISAKRQLLEQMA 268
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRF 361
L E+ + + I+ R G+ + G+E+ LD+ D TL QL F
Sbjct: 269 RLSGEQYEQAIAIILARYP--GAANNVGEELNLDLSVADALTLRQLQHF 315
>gi|259090114|pdb|2WP1|A Chain A, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
gi|259090115|pdb|2WP1|B Chain B, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
Length = 126
Score = 97.8 bits (242), Expect = 9e-18, Method: Composition-based stats.
Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL +++ K W F PVD +L L +Y+D++K PMDLGT++ K++N YK
Sbjct: 16 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYK 75
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
EFA DVRL F N YNP H V AMA TL FE F K+ +
Sbjct: 76 DAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKIPDE 122
>gi|428180935|gb|EKX49800.1| hypothetical protein GUITHDRAFT_67457 [Guillardia theta CCMP2712]
Length = 117
Score = 97.8 bits (242), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/101 (48%), Positives = 65/101 (64%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+++C IL L K GW F+ PVD V L + DY +IIKKPMDLGTVR+ L+N P+
Sbjct: 9 VKKCIGILKVLKNHKHGWVFSEPVDPVKLNIPDYLEIIKKPMDLGTVRTHLDNGTITNPE 68
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EF +V LTF+NA+ YNP H V+ MA+TL ++ KL
Sbjct: 69 EFKTNVVLTFDNAMRYNPSNHDVHIMAKTLKEVRTRLVAKL 109
>gi|33417197|gb|AAH55508.1| Brd2b protein [Danio rerio]
gi|159155579|gb|AAI54432.1| Brd2b protein [Danio rerio]
Length = 558
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L +L+ K W F PVD +L L DYHDIIK PMDL T++ K++ Y+
Sbjct: 340 LRYCSGVLKELLSKKHVAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTIKRKMDEREYR 399
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+F+ DVRL F+N YNP H V +MA L FE F K+
Sbjct: 400 EAQQFSADVRLMFSNCYKYNPPDHDVVSMARKLQDVFEFRFAKM 443
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 179 NAMRRCGEILTK-LMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
N ++ ++L K L + W F+ PVD L L DYH IIK+PMD+GT++ +LENN Y+
Sbjct: 51 NQLQFLHKVLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLENNYYR 110
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
E +D F N +YN + MA++L F QK+++ Q
Sbjct: 111 GASECLQDFNTMFTNCYIYNKPTDDIVLMAQSLEKVF---LQKVAQMPQ 156
>gi|89267975|emb|CAJ81450.1| bromodomain, testis-specific [Xenopus (Silurana) tropicalis]
Length = 438
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD +L L DYHDIIK PMDL +V+ K++ Y
Sbjct: 321 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDAREYA 380
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 381 DAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 424
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 191 LMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTF 250
L K + W F PVD V L L DYH IIK PMD+GT++ +LENN Y E +D F
Sbjct: 3 LWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQDFNTMF 62
Query: 251 NNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 63 TNCYIYNKSTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 111
>gi|396080310|ref|NP_001257500.1| bromodomain-containing protein 2 isoform 2 [Danio rerio]
gi|94732369|emb|CAK04960.1| bromodomain-containing 2 [Danio rerio]
gi|190337777|gb|AAI63905.1| Bromodomain-containing 2a [Danio rerio]
gi|190339055|gb|AAI63902.1| Bromodomain-containing 2a [Danio rerio]
Length = 832
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +L+ K W F PVDV SL L DY+DII PMDL T++ K+++ Y+
Sbjct: 384 LRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYR 443
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 444 DALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKM 487
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + W F+ PVD L L DY++IIK+PMD+GT++ +LENN Y+ E +D
Sbjct: 84 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 143
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA++L F Q
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQ 173
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 673 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 729
Query: 358 LVRFV 362
L R+V
Sbjct: 730 LERYV 734
>gi|396080308|ref|NP_571275.2| bromodomain-containing protein 2 isoform 1 [Danio rerio]
gi|157280793|gb|ABV29329.1| bromodomain-containing protein 2a [Danio rerio]
Length = 836
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +L+ K W F PVDV SL L DY+DII PMDL T++ K+++ Y+
Sbjct: 384 LRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYR 443
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 444 DALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKM 487
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + W F+ PVD L L DY++IIK+PMD+GT++ +LENN Y+ E +D
Sbjct: 84 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 143
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA++L F Q
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQ 173
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 677 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 733
Query: 358 LVRFV 362
L R+V
Sbjct: 734 LERYV 738
>gi|157280791|gb|ABV29328.1| bromodomain-containing protein 2a [Danio rerio]
Length = 838
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +L+ K W F PVDV SL L DY+DII PMDL T++ K+++ Y+
Sbjct: 386 LRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYR 445
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 446 DALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKM 489
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + W F+ PVD L L DY++IIK+PMD+GT++ +LENN Y+ E +D
Sbjct: 84 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 143
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA++L F Q
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQ 173
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 679 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 735
Query: 358 LVRFV 362
L R+V
Sbjct: 736 LERYV 740
>gi|24210305|emb|CAD54663.1| bromodomain containing 2 [Danio rerio]
Length = 806
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +L+ K W F PVDV SL L DY+DII PMDL T++ K+++ Y+
Sbjct: 375 LRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYR 434
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 435 DALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKM 478
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + W F+ PVD L L DY++IIK+PMD+GT++ +LENN Y+ E +D
Sbjct: 73 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 132
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA++L F Q
Sbjct: 133 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQ 162
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 647 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 703
Query: 358 LVRFV 362
L R+V
Sbjct: 704 LERYV 708
>gi|262189359|gb|ACY30377.1| BRD2 [Salmo salar]
Length = 824
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +L+ K W F PVD L L DYHDIIK+PMDL T++ K+++ Y+
Sbjct: 382 LRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYR 441
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA DVR+ ++N YNP H V MA L FE F K+
Sbjct: 442 DAQQFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFEFCFAKM 485
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 155 RANPFGNPK-----AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSL 209
+A P G+P+ R T L + AM + L + W F+ PVD L
Sbjct: 57 QAPPSGSPRPLVHDMNRQGRATNQLQFLQRAM------MKSLWRHHFAWPFHEPVDASKL 110
Query: 210 RLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAET 269
L DYH IIK+PMD+GT++ +LENN Y+ E +D F N +YN + MA++
Sbjct: 111 SLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQS 170
Query: 270 LSAKFEQMFQKLSKQQ 285
L F Q ++ +++
Sbjct: 171 LEKAFLQKVAQMPQEE 186
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL +EIE+D E L TL +
Sbjct: 670 MSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDTDPEEIEIDFETLKPSTLRE 726
Query: 358 LVRFV 362
L R+V
Sbjct: 727 LERYV 731
>gi|148362124|gb|ABQ59651.1| BRD2 [Salmo salar]
gi|148362144|gb|ABQ59668.1| BRD2 [Salmo salar]
Length = 824
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +L+ K W F PVD L L DYHDIIK+PMDL T++ K+++ Y+
Sbjct: 382 LRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYR 441
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA DVR+ ++N YNP H V MA L FE F K+
Sbjct: 442 DAQQFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFEFCFAKM 485
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 155 RANPFGNPK-----AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSL 209
+A P G+P+ R T L + AM + L + W F+ PVD L
Sbjct: 57 QAPPSGSPRPLVHDMNRQGRATNQLQFLQRAM------MKSLWRHHFAWPFHEPVDASKL 110
Query: 210 RLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAET 269
L DYH IIK+PMD+GT++ +LENN Y+ E +D F N +YN + MA++
Sbjct: 111 SLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQS 170
Query: 270 LSAKFEQMFQKLSKQQ 285
L F Q ++ +++
Sbjct: 171 LEKAFLQKVAQMPQEE 186
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL +EIE+D E L TL +
Sbjct: 670 MSYDEKRQLSLDINKLPGEKLGRVVHIIQAREP---SLRDTDPEEIEIDFETLKPSTLRE 726
Query: 358 LVRFV 362
L R+V
Sbjct: 727 LERYV 731
>gi|326487788|dbj|BAK05566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 16/129 (12%)
Query: 160 GNPKAKRAAAGTXSLTSTKN--------------AMRRCGEILTKLMKDKQGWAFNTPVD 205
GN +++++ GT S++S++N R C IL KLM GW F+ VD
Sbjct: 48 GNKRSQKS--GTTSISSSENRPSSNNKAGSMNASKTRVCRNILGKLMDHPGGWIFHKLVD 105
Query: 206 VVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYA 265
+ DY D+I+ PMDLGTV+ KL N Y +FA DVRLTF+NA+ YNP G V+
Sbjct: 106 PDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHT 165
Query: 266 MAETLSAKF 274
+AE L+ F
Sbjct: 166 VAEQLNIMF 174
>gi|348690450|gb|EGZ30264.1| hypothetical protein PHYSODRAFT_310264 [Phytophthora sojae]
Length = 1333
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 61/102 (59%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+M++C IL LM + + F PVD V+L + DY +IK+PMDLGT+RS LE Y P
Sbjct: 332 SMKKCLSILKGLMSNPKSAPFLVPVDPVALGIPDYFHVIKEPMDLGTIRSNLETGFYDTP 391
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
FAE VRL F NA++YN V+ A L FE+ F+ L
Sbjct: 392 SAFAEHVRLVFRNAMLYNAAHSQVHIYARKLMDDFERRFKSL 433
>gi|28278510|gb|AAH45866.1| Brd2a protein [Danio rerio]
Length = 586
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +L+ K W F PVDV SL L DY+DII PMDL T++ K+++ Y+
Sbjct: 386 LRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYR 445
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 446 DALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKM 489
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + W F+ PVD L L DY++IIK+PMD+GT++ +LENN Y+ E +D+
Sbjct: 84 LVRMLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDL 143
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA++L F Q
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQ 173
>gi|195149830|ref|XP_002015858.1| GL11280 [Drosophila persimilis]
gi|194109705|gb|EDW31748.1| GL11280 [Drosophila persimilis]
Length = 265
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 54/226 (23%)
Query: 184 CGEILTKLMKD---KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C I KL K W F P+D L L DYH I+KKPMDL ++R++L+ +Y
Sbjct: 25 CWAIFIKLFSSQYKKLAWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAGLYVNAD 84
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ--------------- 285
EF DVRL F+N +Y H + MA+ L A FE MF +++
Sbjct: 85 EFVRDVRLMFDNTYLYTTPDHLCHQMAKKLQAIFEAMFFEIASTDSSDTITETDVSSMFP 144
Query: 286 -----------QRQGILGRGKAREMSLEEKMA---------------LGRSLEELPQEEL 319
+ G + +AR L+ + A LG L+EL E L
Sbjct: 145 IATIPDAPINPHKDGGVKMTRARRQQLQSRSANEAAVRPWTAKENNHLGDRLQELKGEVL 204
Query: 320 GKLLGIVKKRNS---GNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
+++ I+K+ + NG + E ++E+L T +VR++
Sbjct: 205 HRVIHIIKEMENIPIINGGM-------EFNLESLKTQTKCSIVRYL 243
>gi|195999880|ref|XP_002109808.1| hypothetical protein TRIADDRAFT_20501 [Trichoplax adhaerens]
gi|190587932|gb|EDV27974.1| hypothetical protein TRIADDRAFT_20501, partial [Trichoplax
adhaerens]
Length = 470
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 118/273 (43%), Gaps = 63/273 (23%)
Query: 187 ILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
+L +LM K W F PV+ L L DY++IIK PMDLGTV+ K E YK EFA
Sbjct: 158 VLKELMLKKHRAYAWPFYEPVNAEKLGLTDYYEIIKHPMDLGTVKDKFEKLEYKAINEFA 217
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKARE----- 298
DVRL F N YNP H + MA L FE + ++ + +GKA +
Sbjct: 218 ADVRLIFTNCYKYNPSDHDIVNMARRLQDVFEFKYAQIPDESTN----TKGKASKKSSQG 273
Query: 299 -------------------------------------MSLEEKMALGRSLEELPQEELGK 321
M+ +EK L + +LP ++LG+
Sbjct: 274 TSKPKPKQPVKKKQRKKTPPPKKRKKSYNSEVLDVEPMTYDEKRQLSLDINKLPGDKLGR 333
Query: 322 LLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQ 381
++ I++ R + +EIE+D E L TL +L R+V + K +K +
Sbjct: 334 VVHIIQSREP--ALRESNPEEIEIDFETLKPSTLRELERYVQSTLKRQK----------R 381
Query: 382 VAVAVAAPVVI--ERSKKGDVAAEEEVDIGEEI 412
+V A PVV+ E +KK + D+ + +
Sbjct: 382 PSVKKADPVVLGKEHAKKKEELERRLQDVSDRL 414
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N +R ++ L K + W F PVD V L+L DY IIKKPMDLGT++ KLE +Y
Sbjct: 5 NQLRFLKTVIDGLWKHRYAWPFRQPVDPVKLQLPDYFKIIKKPMDLGTIKRKLEGKMYHS 64
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
+E +D+ TF N YN + M E L +++ ++ Q
Sbjct: 65 AKECMDDILRTFTNCYTYNKTSDDIVLMCEELEKVYKKKLAQMPAQ 110
>gi|395854578|ref|XP_003799760.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Otolemur garnettii]
Length = 773
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C EIL +++ K W F VDV +L L +Y DI+K PMDLGT++ K++N YK
Sbjct: 203 LRHCSEILKEMLAKKHFSYAWPFYNSVDVNALGLHNYXDIVKHPMDLGTIKWKMDNQEYK 262
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA DVRL N YNP H V M + L FE F K+
Sbjct: 263 DAYEFAADVRLMLMNCYKYNPPDHEVVTMTKMLQDVFEMHFXKI 306
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
MDL T++ LEN Y E ED+ F+N +YN + MA+TL F QKL
Sbjct: 1 MDLNTIKKHLENKYYVKASECIEDLNTMFSNCYLYNKPXDDIVLMAQTLKKLF---IQKL 57
Query: 282 SKQQQRQGILGRGKAR 297
S+ Q + ++G GK R
Sbjct: 58 SQMPQEEKVVG-GKER 72
>gi|354544706|emb|CCE41432.1| hypothetical protein CPAR2_304210 [Candida parapsilosis]
Length = 748
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C + + +LM K + F PVD V+L L +YHDI+K+PMDLGT++SKL NN+Y+
Sbjct: 389 LRFCNQTIKELMSKKHYNYNFPFLAPVDAVALNLPNYHDIVKEPMDLGTIQSKLTNNLYE 448
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
+F +DVRL F N +NP+G V M L A F++ +
Sbjct: 449 NADDFEKDVRLVFRNCYAFNPEGTDVNMMGHRLEAIFDKKW 489
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y++ I +PMDL T+ K+ N Y+ + +D L N
Sbjct: 227 KDAVPFLAPVDTVKLNVPFYYNYIPRPMDLSTIERKINANAYEDIAQVVDDFNLMVENCK 286
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + + MA + A FE+
Sbjct: 287 KFNGEAAGISKMATNIQAHFEK 308
>gi|198425802|ref|XP_002127242.1| PREDICTED: similar to bromodomain-containing protein 2 [Ciona
intestinalis]
Length = 1083
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C +L K W F VD L L DY+D+IK PMDLGT+R K+E+ Y+
Sbjct: 359 MKYCNNLLKDFFSKKHASFSWPFYKSVDADLLGLHDYYDMIKNPMDLGTMRKKMESREYR 418
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P EFA D+RL N YNP H V AMA+ LS FE F K+
Sbjct: 419 TPDEFAYDMRLIVTNCYKYNPPDHDVVAMAKKLSDVFEMKFAKM 462
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 52/95 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++T L K W F+ PVD V L L DY DIIK PMD+ ++ KLE N Y +E +D
Sbjct: 46 VMTSLWKHHFAWPFHVPVDPVKLGLPDYFDIIKHPMDMALIKKKLETNQYYSAKECLQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
L F+N +YN V MA+TL F Q + +
Sbjct: 106 NLMFSNCYIYNKPTDDVVLMAQTLEKNFLQKIRDM 140
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
+A+ M+ +EK L + +LP ++LG+++ I++ R + DEIE+D E L T
Sbjct: 646 QAKPMTYDEKRQLSLDINKLPGDKLGRVVHIIQTREPSLK--DSNPDEIEIDFETLKPST 703
Query: 355 LSQLVRFVDNF--KKAEKDKTEKEP 377
L +L ++V KK K T+K+P
Sbjct: 704 LRELEKYVMTCLRKKPRKPYTKKQP 728
>gi|198456597|ref|XP_001360386.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
gi|198135670|gb|EAL24961.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
Length = 265
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 54/226 (23%)
Query: 184 CGEILTKLMKD---KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C I+ KL K W F P+D L L DYH I+KKPMDL ++R++L+ +Y
Sbjct: 25 CKAIIRKLFSSQYKKLAWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAGLYVNAD 84
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ--------------- 285
EF DVRL F+N +Y H + MA+ L A FE MF +++
Sbjct: 85 EFVRDVRLMFDNTYLYTTPDHLCHQMAKKLQAIFEAMFFEIASTDSSDTITETDVSSMFP 144
Query: 286 -----------QRQGILGRGKAREMSLEEKMA---------------LGRSLEELPQEEL 319
+ G + +AR L+ + A LG L+EL E L
Sbjct: 145 IATIPDAPINPHKDGGVKMTRARRQQLQSRSANEAAVRPWTAKENNHLGDRLQELKGEVL 204
Query: 320 GKLLGIVKKRNS---GNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
+++ I+K+ + NG + E ++E+L T +VR++
Sbjct: 205 HRVIHIIKEMENIPIINGGM-------EFNLESLKTQTKCSIVRYL 243
>gi|10441758|gb|AAG17179.1|AF191032_1 RING3, partial [Myxine glutinosa]
Length = 732
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL ++ K W F VD +L L DYHDIIK PMDL T++ K E Y
Sbjct: 410 LRHCQTILKEIFTKKHAAYAWPFYKAVDAFALGLHDYHDIIKIPMDLTTIKEKFERREYT 469
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA+D+RL F+N YNP H V AMA L FE F K+
Sbjct: 470 NLHEFADDMRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKV 513
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F+ PVD L L DY+ IIK P+D+ T++ +LE+N Y E +D
Sbjct: 42 VMKVLWKHQFAWPFHHPVDAAKLNLPDYYQIIKNPLDMLTIKKRLESNYYWTAVECIQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
F N +YN + MA+T+ F Q
Sbjct: 102 STMFTNCYIYNRPNDDIVLMAQTVEKAFLQ 131
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 292 GRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLS-CHGDEIELDIEAL 350
G AR M+ +EK L + LP ++LG ++ I++ R SLS + DEIE+D E L
Sbjct: 670 GTEDARPMTYDEKRQLSLDINRLPGDKLGFVVNIIQSREP---SLSESNPDEIEIDFETL 726
Query: 351 DNDTL 355
TL
Sbjct: 727 KPSTL 731
>gi|326495086|dbj|BAJ85639.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 106/231 (45%), Gaps = 52/231 (22%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NNV 235
+ MR+ I+ ++ + F PVDVV L+L DYH II KPMD T+++K+E
Sbjct: 3 DLMRQLAGIIRQITSHEWSAPFLQPVDVVGLQLDDYHKIITKPMDFSTIQNKMEGKDGTK 62
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF----------------- 278
YK +E DVRL FNNA+ YN + H V+ MA+ L KFE+ +
Sbjct: 63 YKSVREIYSDVRLIFNNAMTYNDEHHDVHIMAKLLLDKFEEKWLQLLPKVENEERKHVEP 122
Query: 279 --------------QKLSK-------------QQQRQGILGRGKAREMSLEEKMALGRSL 311
KL+K ++ R ++ R K +M+ +EK LG L
Sbjct: 123 NDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCK--KMTTDEKRKLGAGL 180
Query: 312 EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
L E+L K L +V + N +E+ LD++A TL +L FV
Sbjct: 181 CHLTPEDLSKALELVAQ---DNPDFQTTAEEVHLDMDAQSETTLWRLKFFV 228
>gi|391337779|ref|XP_003743242.1| PREDICTED: bromodomain testis-specific protein-like [Metaseiulus
occidentalis]
Length = 802
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C I+ +L K W F T VDV L L DY+DII +PMDLGT+++K+E Y+
Sbjct: 396 LKYCNSIIKELFAKKHSAYAWPFYTAVDVEGLGLHDYYDIITQPMDLGTIKTKMERREYR 455
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P +F DVRL F N YNP H V MA L FE K+
Sbjct: 456 NPDDFCNDVRLVFMNCYKYNPADHEVVKMARKLQDVFEMKLTKM 499
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 170 GTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRS 229
GT +T ++ + K W F PVD + L L DY IIK PMDLGT++
Sbjct: 62 GTRPHRNTNQLQFMLKHVMKAVWKHNFAWPFQQPVDTIKLNLPDYFKIIKVPMDLGTIKK 121
Query: 230 KLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQG 289
+LEN Y QE D + F+N +YN G V MA++L F KL++ Q +
Sbjct: 122 RLENCYYYDAQECINDFNVLFSNCYIYNKPGEDVVLMAQSLEKLF---LSKLAEMPQEET 178
Query: 290 IL 291
+L
Sbjct: 179 VL 180
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 12/89 (13%)
Query: 283 KQQQRQGILGRG--------KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNG 334
K+Q+R+ + RG A+ MS +EK L + +LP ++LG+++ I++ R
Sbjct: 613 KRQKRETAVARGDFDSEDEDSAKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREP--- 669
Query: 335 SL-SCHGDEIELDIEALDNDTLSQLVRFV 362
SL + DEIE+D E L TL +L +V
Sbjct: 670 SLRDSNPDEIEIDFETLKPSTLRELESYV 698
>gi|159164343|pdb|2E7N|A Chain A, Solution Structure Of The Second Bromodomain From Human
Bromodomain-Containing Protein 3
Length = 117
Score = 95.5 bits (236), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+ K++ Y
Sbjct: 14 LRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYP 73
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 74 DAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 117
>gi|298706226|emb|CBJ29267.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
Length = 1079
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 9/127 (7%)
Query: 187 ILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
ILTKLM G FN PVD + L + DY + PMDLGT++S+L + Y P+EFA
Sbjct: 604 ILTKLMSSGTGPQRGLFNVPVDPLKLGIPDYFKRVPHPMDLGTIKSRLLSMSYTTPEEFA 663
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEE 303
DVRL F NA+ +NP+ H+V+ A L +F+Q + K + G L G A+ +S
Sbjct: 664 SDVRLVFKNAIGFNPETHFVHTWAVQLLNEFDQEYSK------QIGKLDEGWAKSLSHSC 717
Query: 304 KMALGRS 310
++ G++
Sbjct: 718 QLCQGQT 724
>gi|348513555|ref|XP_003444307.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 810
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 138 ATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ- 196
A H+ P +RG + P PK K +R C +IL +L+ +
Sbjct: 226 AEHSAPGMLISHRGSGR---PIKRPK-KDLPLFEAKKVRLSEQLRCCNDILKELLSKRHS 281
Query: 197 --GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
W F PVD +L L DYHDII PMDL T++ K++ Y +EFA DVRL F+N
Sbjct: 282 AYAWPFYVPVDAAALGLHDYHDIITHPMDLSTIKKKMDQREYGNAKEFAADVRLMFSNCY 341
Query: 255 VYNPKGHYVYAMAETLSAKFEQMFQKL---------SKQQQRQGILGRG 294
YNP + V MA L FE + KL S QQ+R G+G
Sbjct: 342 KYNPPSNEVVHMARKLQEVFEARYLKLPHEAESCQTSHQQER----GKG 386
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + + W F+ PVD V+L L DY+ II PMDLGT++ +L+N+ Y + +D
Sbjct: 39 VLQALWRHQYSWPFHQPVDAVALCLPDYYTIITNPMDLGTIKKRLKNSYYWQAVDCIDDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
F N VYN G + MA+TL F QKLSK Q + ++
Sbjct: 99 NTMFTNCYVYNQPGDDIVFMAKTLEKLF---LQKLSKMPQEEFVV 140
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGD----EIELDIEALDNDT 354
M+ +EK L + +LP ++LGKL+ I+ R SC D EIE+D L T
Sbjct: 508 MTYQEKKQLKLDINKLPGDKLGKLVKIIHTRE------SCLRDSTLEEIEVDFGILKPST 561
Query: 355 LSQLVRFV-DNFKKAEKDKTEKEP 377
L L RFV + K+ K+ T+ P
Sbjct: 562 LRALQRFVAECLTKSVKNVTKNRP 585
>gi|313212448|emb|CBY36425.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 108/263 (41%), Gaps = 80/263 (30%)
Query: 178 KNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENN 234
K MR C IL +L + + W F PVDV L L DY+D+IK+PMDL + ++N+
Sbjct: 234 KKEMRVCAAILRELHQKRHQQYAWPFYVPVDVKGLELHDYYDVIKRPMDLSLAQKNIDND 293
Query: 235 VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAM------------AETLSA---------- 272
+Y EF D+ L F N YNP H V M AE+ S+
Sbjct: 294 MYNDKNEFIADIMLIFENCRAYNPPDHEVVQMANRLQKVFEAKVAESFSSADAAANHSEE 353
Query: 273 --------------KFEQMFQKLSKQQQRQGIL--------------------GRGKA-- 296
K +Q+ +KL + Q++ L G GK
Sbjct: 354 SDFGDSDSDDERGRKLQQIQKKLREVQEQLAYLMDLQARLVKAGKRKKKKGDMGAGKKGG 413
Query: 297 -----------------REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCH 339
+EM+ +EK L + LP ++LG+++ I++ R + +
Sbjct: 414 NRDGEGAIYDFDSDEDHKEMTYDEKRQLSLDINRLPSDKLGRVVTIIQNREA--HYREHN 471
Query: 340 GDEIELDIEALDNDTLSQLVRFV 362
DEIE+D + L TL +L +V
Sbjct: 472 PDEIEIDFDTLKTATLRELDTYV 494
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 36/72 (50%)
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAED 245
I L K W F PVD V L L DY IIK PMD+ T++ KL + Y+ ++ D
Sbjct: 19 HIFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYSGQYESAKQCIAD 78
Query: 246 VRLTFNNALVYN 257
L F N YN
Sbjct: 79 YDLMFENCYNYN 90
>gi|134105292|pdb|2OO1|A Chain A, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105293|pdb|2OO1|B Chain B, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105294|pdb|2OO1|C Chain C, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105295|pdb|2OO1|D Chain D, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|340708300|pdb|3S92|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 113
Score = 95.1 bits (235), Expect = 6e-17, Method: Composition-based stats.
Identities = 50/112 (44%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 173 SLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRS 229
S+ +R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+
Sbjct: 1 SMGKLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKR 60
Query: 230 KLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K++ Y Q FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 61 KMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 112
>gi|313226820|emb|CBY21965.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 108/263 (41%), Gaps = 80/263 (30%)
Query: 178 KNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENN 234
K MR C IL +L + + W F PVDV L L DY+D+IK+PMDL + ++N+
Sbjct: 234 KKEMRVCAAILRELHQKRHQQYAWPFYVPVDVKGLELHDYYDVIKRPMDLSLAQKNIDND 293
Query: 235 VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAM------------AETLSA---------- 272
+Y EF D+ L F N YNP H V M AE+ S+
Sbjct: 294 MYNDKNEFIADIMLIFENCRAYNPPDHEVVQMANRLQKVFEAKVAESFSSADAAANHSEE 353
Query: 273 --------------KFEQMFQKLSKQQQRQGIL--------------------GRGKA-- 296
K +Q+ +KL + Q++ L G GK
Sbjct: 354 SDFGDSDSDDERGRKLQQIQKKLREVQEQLAYLMDLQARLVKAGKRKKKKGDMGAGKKGG 413
Query: 297 -----------------REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCH 339
+EM+ +EK L + LP ++LG+++ I++ R + +
Sbjct: 414 NRDGEGAIYDFDSDEDHKEMTYDEKRQLSLDINRLPSDKLGRVVTIIQNREA--HYREHN 471
Query: 340 GDEIELDIEALDNDTLSQLVRFV 362
DEIE+D + L TL +L +V
Sbjct: 472 PDEIEIDFDTLKTATLRELDTYV 494
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 35/72 (48%)
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAED 245
I L K W F PVD V L L DY IIK PMD+ T++ KL Y+ ++ D
Sbjct: 19 HIFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYGGQYESAKQCIAD 78
Query: 246 VRLTFNNALVYN 257
L F N YN
Sbjct: 79 YDLMFENCYNYN 90
>gi|159164649|pdb|2I8N|A Chain A, Solution Structure Of The Second Bromodomain Of Brd4
Length = 114
Score = 95.1 bits (235), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE Y+
Sbjct: 3 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 62
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 63 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 106
>gi|448531883|ref|XP_003870352.1| Bdf1 transcription factor [Candida orthopsilosis Co 90-125]
gi|380354706|emb|CCG24222.1| Bdf1 transcription factor [Candida orthopsilosis]
Length = 730
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C + + +LM K + F PVD V+L L +YH+I+K+PMDLGT++SKL NN+Y+
Sbjct: 379 LRFCNQTIKELMSKKHYNYNFPFLAPVDAVALNLPNYHEIVKEPMDLGTIQSKLTNNLYE 438
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
EF +D+RL F N +NP+G V M L A F++ +
Sbjct: 439 NADEFEKDIRLMFRNCYAFNPEGTDVNMMGHRLEAIFDKKW 479
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y++ I +PMDL T+ K+ N Y+ + +D L +N
Sbjct: 220 KDAVPFLAPVDTVKLNVPFYYNYIPRPMDLLTIERKINANAYEEISQVVDDFNLMVDNCK 279
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + + MA + A FE+
Sbjct: 280 KFNGEAAGISKMATNIQAHFEK 301
>gi|194388908|dbj|BAG61471.1| unnamed protein product [Homo sapiens]
Length = 405
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 50/85 (58%)
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
W F PVD +L L DYHDIIK PMDL TV+ K++ Y Q FA DVRL F+N Y
Sbjct: 10 AWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKY 69
Query: 257 NPKGHYVYAMAETLSAKFEQMFQKL 281
NP H V AMA L FE F K+
Sbjct: 70 NPPDHEVVAMARKLQDVFEMRFAKM 94
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 251 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 307
Query: 358 LVRFV 362
L R+V
Sbjct: 308 LERYV 312
>gi|449674634|ref|XP_002169264.2| PREDICTED: bromodomain-containing protein 4-like [Hydra
magnipapillata]
Length = 1019
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C ++ +++ K W F PV +L L DY DIIKKPMDLGTV+ K++ Y
Sbjct: 302 LKYCNMLIKEMLSKKHEAYAWPFYKPVQAEALGLHDYFDIIKKPMDLGTVKFKMDCREYS 361
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P +FA DVRL F N YNP H V MA L FE F K+
Sbjct: 362 SPSDFATDVRLIFTNCYKYNPPDHDVVKMARKLQDVFEYKFAKM 405
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 55/90 (61%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ ++ + + W F PVD V L++ DY++I K+PMD GT++ KLE+N Y C +E E+
Sbjct: 26 VMRQIQRHQFAWPFAKPVDAVKLKIPDYYEITKRPMDFGTIKKKLEHNDYTCAKECIEEF 85
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
+L F N YN G + MAE L F++
Sbjct: 86 KLVFTNCYGYNKPGEDIVIMAEVLEKFFDE 115
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVK-KRNSGNGSLSCHGDEIELDIEALDNDTL 355
R M+ +EK L + +LP ++LGK++ I++ K S G+ + DEIE+D E L TL
Sbjct: 547 RAMTYDEKRQLSLDINKLPGDKLGKVVHIIQSKEPSLKGN---NPDEIEIDFETLKPATL 603
Query: 356 SQLVRFVDN 364
+L ++V++
Sbjct: 604 RELEKYVNS 612
>gi|149237571|ref|XP_001524662.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451259|gb|EDK45515.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 788
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R CG+ + +LM K + F PVD V+L + +YHDI+K PMD GT++SKL NN Y+
Sbjct: 434 LRFCGQTIKELMSKKHQNYNFPFLAPVDAVALNIPNYHDIVKHPMDFGTIQSKLTNNQYE 493
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
+F +DV+L F+N ++NP+G V M + A F++ +
Sbjct: 494 SGDDFEKDVKLVFHNCYLFNPEGTDVNMMGHRMEAVFDKKW 534
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y++ I +PMDL T+ KL Y+ +FA+D L N
Sbjct: 273 KDAAPFLHPVDTVKLNIPFYYNYIPRPMDLSTIERKLNAKAYEDISQFADDFNLMVANCK 332
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + + MA + A FE+
Sbjct: 333 KFNGETAGISRMATNIQAHFEK 354
>gi|390352956|ref|XP_003728006.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Strongylocentrotus purpuratus]
Length = 568
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C ++ +LM K W F PVD L DYH+IIK PMD+GT++ KLEN YK
Sbjct: 422 LKFCYGVIKELMSKKHSVYAWPFFKPVDADVFGLHDYHEIIKTPMDMGTIKVKLENRDYK 481
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLS 282
+FA DVRL F N YNP+ + V MA L FE F K+S
Sbjct: 482 NANDFAADVRLIFRNCYKYNPRDNDVVKMARKLENVFEVKFAKIS 526
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 156 ANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYH 215
A+P G ++++ T L + +L L K + W F+ PVD L L DY+
Sbjct: 184 ASPTGQTQSRQPGRQTNQLQYLQKV------VLKALWKHQFAWPFHHPVDPTKLALPDYY 237
Query: 216 DIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
IIK PMDLGT++ +LE+ Y +E D +L F N +++ G V MA+ L F
Sbjct: 238 KIIKTPMDLGTIKKRLESIYYHSAKECISDFKLVFTNCYLHDKPGEDVVLMAQALEKLF 296
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%)
Query: 213 DYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSA 272
DY IIK PMDLGT++ +LE+ Y +E D L F N ++N G V MA+ L
Sbjct: 1 DYLKIIKTPMDLGTIKKRLESIYYHSAKECISDFNLVFTNCYLHNKPGEDVVFMAQALEK 60
Query: 273 KF 274
F
Sbjct: 61 LF 62
>gi|20302741|gb|AAM18869.1|AF391288_5 unknown [Branchiostoma floridae]
Length = 664
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C I+ ++ K W F PVD L L DYH+IIK PMDLGTV+ K++ YK
Sbjct: 362 LKYCQGIIKEMFAKKHAAYAWPFYEPVDADLLGLHDYHEIIKHPMDLGTVKKKMDTREYK 421
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA D+R+ F+N YNP H V MA L FE + K+
Sbjct: 422 SAQEFASDMRMIFSNCYRYNPPEHDVVQMARKLQDVFEMKYAKM 465
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F+ PVD V L + DY IIK PMDLGT++ +LE N Y +E +D
Sbjct: 48 VMKAVWKHNFAWPFHEPVDWVKLNIPDYPKIIKTPMDLGTIKKRLETNYYYSAKECIQDF 107
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ------QQRQGILGRGK 295
L F N VYN G VY MA+TL F Q ++ + QQ+ + +GK
Sbjct: 108 NLMFTNCYVYNKPGEDVYLMAQTLEKLFLQKVAQMPPEEVEVASQQKPAVQTKGK 162
>gi|161611729|gb|AAI55902.1| Brd2-a protein [Xenopus laevis]
Length = 517
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVDV +L L DY+DIIK PMD+ T++ K+++ +K
Sbjct: 324 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFK 383
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA +RL F+N YNP H V AMA L FE + K+
Sbjct: 384 DAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GTV+ +LENN Y E +D
Sbjct: 66 VVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQDF 125
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA++L F Q ++ +++Q
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQMPQEEQ 165
>gi|80971731|gb|ABB52829.1| BRD2 [Oncorhynchus mykiss]
Length = 812
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 161 NPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDI 217
PKA R A + L R C +L L+ K W F PVD +L L DYHDI
Sbjct: 338 QPKAPRRAKLSQQL-------RYCNSVLKDLLSKKHAAYAWPFYKPVDASALGLHDYHDI 390
Query: 218 IKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
IK PMDL ++ ++++ Y+ Q+F+ DVRL F+N YNP H V MA L FE
Sbjct: 391 IKCPMDLSNIKRRMDSREYRDSQQFSADVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFR 450
Query: 278 FQKLSKQQQRQ 288
F K+ + +Q
Sbjct: 451 FAKMPDEPLQQ 461
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + W F+ PVD L L DYH IIK+PMD+GT++ +LENN Y+ E +D
Sbjct: 60 MIKSLWRHHFAWPFHEPVDAFRLNLPDYHKIIKQPMDMGTIKKRLENNYYRSASECMQDF 119
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA++L F Q ++ +++
Sbjct: 120 NTMFTNCYIYNKPTDDIVLMAQSLEKVFLQKVAQMPQEE 158
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L TL +
Sbjct: 655 MSYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDTNPEEIEIDFETLKPSTLRE 711
Query: 358 LVRFV 362
L R+V
Sbjct: 712 LERYV 716
>gi|54311476|gb|AAH84758.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 525
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVDV +L L DY+DIIK PMD+ T++ K+++ +K
Sbjct: 324 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFK 383
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA +RL F+N YNP H V AMA L FE + K+
Sbjct: 384 DAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GTV+ +LENN Y E +D
Sbjct: 66 VVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQDF 125
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA++L F Q ++ +++Q
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQMPQEEQ 165
>gi|120577456|gb|AAI30180.1| Brd2-a protein [Xenopus laevis]
Length = 518
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVDV +L L DY+DIIK PMD+ T++ K+++ +K
Sbjct: 324 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFK 383
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA +RL F+N YNP H V AMA L FE + K+
Sbjct: 384 DAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GTV+ +LENN Y E +D
Sbjct: 66 VVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQDF 125
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA++L F Q ++ +++Q
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQMPQEEQ 165
>gi|76780317|gb|AAI06310.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 517
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVDV +L L DY+DIIK PMD+ T++ K+++ +K
Sbjct: 324 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFK 383
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA +RL F+N YNP H V AMA L FE + K+
Sbjct: 384 DAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GTV+ +LENN Y E +D
Sbjct: 66 VVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQDF 125
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA++L F Q ++ +++Q
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQMPQEEQ 165
>gi|27696271|gb|AAH43784.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 539
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L+ K W F PVDV +L L DY+DIIK PMD+ T++ K+++ +K
Sbjct: 344 LKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFK 403
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA +RL F+N YNP H V AMA L FE + K+
Sbjct: 404 DAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 447
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GTV+ +LENN Y E +D
Sbjct: 86 VVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQDF 145
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA++L F Q ++ +++Q
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQMPQEEQ 185
>gi|261278848|pdb|3JVL|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
gi|261278849|pdb|3JVM|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
Length = 120
Score = 94.0 bits (232), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++SKLE+ Y+
Sbjct: 11 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYR 70
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
QEF DVRL F+N YNP H V AMA L FE F K+ + +
Sbjct: 71 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPE 119
>gi|357118940|ref|XP_003561205.1| PREDICTED: transcription factor GTE1-like [Brachypodium distachyon]
Length = 343
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 118/272 (43%), Gaps = 58/272 (21%)
Query: 167 AAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGT 226
AA G MR+ G I+ + F PVDVV L+L DY+ II KPMD T
Sbjct: 63 AANGGSHCKGMSELMRQFGGIIRTVTNHDWAEPFLKPVDVVGLQLDDYYKIITKPMDFST 122
Query: 227 VRSKLE---NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL-- 281
+R+K+E Y +E DVRL F NA+ YN + H V+ MA+ L +FE+ + L
Sbjct: 123 IRNKMEGKDGTKYNNVREIYSDVRLIFANAMKYNDEHHDVHIMAKLLLERFEEKWLHLLP 182
Query: 282 -----------------------------------------SKQQQRQGILGRGKAREMS 300
+KQ + + + R+M+
Sbjct: 183 KVENEERKIKEEPNDVPSTNTSPEAAIAKLAKDTDDELNEINKQLEDLRKMVVQRCRKMT 242
Query: 301 LEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVR 360
+EK LG L L ++L K L +V + N S G+E++LD++A TL +L
Sbjct: 243 TDEKRKLGAGLCHLTPDDLSKALEMVAQDNP---SFQISGEEVDLDMDAQTETTLWRLKF 299
Query: 361 FV----DNFKKAEKDKTE-----KEPMCSQVA 383
FV + KA DKT+ K +C+ +A
Sbjct: 300 FVREALERQAKAAPDKTDENAKRKREICNALA 331
>gi|291230216|ref|XP_002735064.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Saccoglossus kowalevskii]
Length = 597
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C I+ +L K W F PVD L L DYHDIIK PMDLGTV+ KLE Y
Sbjct: 151 LKYCNGIIKELYSKKHSGYAWPFYKPVDANLLGLHDYHDIIKYPMDLGTVKRKLETRDYT 210
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+ A DVR F N YNP H V AMA L FE F K+
Sbjct: 211 NANDIAADVRAIFTNCYKYNPPDHDVVAMARKLQDVFEMKFAKM 254
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ MS +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 427 AKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQAREP---SLRDSNPDEIEIDFETLKPST 483
Query: 355 LSQLVRFV 362
L +L R+V
Sbjct: 484 LRELERYV 491
>gi|120431733|ref|NP_001073342.1| bromodomain testis-specific protein isoform B [Mus musculus]
Length = 326
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 174 LTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN 233
LT+ ++R +L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN
Sbjct: 27 LTNQLQFLQRV--VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEN 84
Query: 234 NVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGR 293
Y+ E ED F+N +YN G + MA+ L F QKLS+ Q + ++G
Sbjct: 85 KYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLF---MQKLSQMPQEEQVVGG 141
Query: 294 GKAREMSLEEKMALGRSLEELP 315
+ + +++K+A+ + E++P
Sbjct: 142 KERIKKDIQQKIAVSSAKEQIP 163
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVR 228
++ C EIL +++ K W F PVD +L L +Y+D++K PMDLGT++
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIK 322
>gi|62086391|dbj|BAD91553.1| bromodomain-containing protein [Mus musculus]
Length = 326
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 174 LTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN 233
LT+ ++R +L L K W F PVD V L+L DY+ IIK PMDL T++ +LEN
Sbjct: 27 LTNQLQFLQRV--VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEN 84
Query: 234 NVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGR 293
Y+ E ED F+N +YN G + MA+ L F QKLS+ Q + ++G
Sbjct: 85 KYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLF---MQKLSQMPQEEQVVGG 141
Query: 294 GKAREMSLEEKMALGRSLEELP 315
+ + +++K+A+ + E++P
Sbjct: 142 KERIKKDIQQKIAVSSAKEQIP 163
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVR 228
++ C EIL +++ K W F PVD +L L +Y+D++K PMDLGT++
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIK 322
>gi|405967643|gb|EKC32780.1| Bromodomain testis-specific protein [Crassostrea gigas]
Length = 1173
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 53/90 (58%)
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
W F PVD L L DYHDIIKKPMDLGT++ K+E+ YK +FAEDVRL F N Y
Sbjct: 367 AWPFYKPVDADVLGLHDYHDIIKKPMDLGTIKKKMESREYKTAAQFAEDVRLIFTNCYRY 426
Query: 257 NPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
NP V MA L FE + + ++ +
Sbjct: 427 NPTDSDVVVMARKLQDVFEVKYATMPEETE 456
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + + + W F+ PVD+ L L DY+DIIK+PMDLGT++ +LE N Y E +D
Sbjct: 85 VLKAVWRHQYAWPFHKPVDIKLLNLPDYYDIIKQPMDLGTIKERLETNFYYSATECIQDF 144
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
F N +YN + MA+ L F Q ++
Sbjct: 145 NQMFTNCYIYNNPKEDIVLMAQVLEKLFLQKVAQM 179
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ M+ +EK L + +LP ++LG+++ I++ R SL + DEIE+D E L T
Sbjct: 628 AKPMTYDEKRQLSLDINKLPGDKLGRVVYIIQSREP---SLRDSNPDEIEIDFETLKPST 684
Query: 355 LSQLVRFVDNFKKAEKDK 372
L +L +V + K K K
Sbjct: 685 LRELESYVMSCLKKNKRK 702
>gi|410903440|ref|XP_003965201.1| PREDICTED: bromodomain-containing protein 2-like [Takifugu
rubripes]
Length = 546
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +++ K W F PVD V+L+L DYHDIIK PMDL TV+ KL+ Y
Sbjct: 246 LKFCNVILKEMLSKKHAAYAWPFYEPVDAVALQLNDYHDIIKHPMDLSTVKRKLDRGEYP 305
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
FA DV+L F+N YNP V A A+ L FE+ F K+
Sbjct: 306 NADSFAADVQLIFSNCYKYNPSHLEVVAHAKKLQGVFEKSFAKI 349
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 179 NAMRRCGEILTK-LMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
N ++ I+ K L + W F PVD V L L DYH II PMDLGT++ +LENN Y
Sbjct: 30 NQLQYMQNIVVKSLWRHHYAWPFYEPVDAVGLGLADYHKIITSPMDLGTIKKRLENNYYW 89
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
E +D F N +YN + MA TL F Q ++ +++
Sbjct: 90 TASECLQDFNTMFTNCYIYNKPTDDIVLMALTLEKIFLQKVAQMPQEE 137
>gi|344251852|gb|EGW07956.1| Bromodomain testis-specific protein [Cricetulus griseus]
Length = 565
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 52/85 (61%)
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
W F PVD +L L +Y+DI+K PMDLGT++ K++N YK EFA DVRL F N Y
Sbjct: 10 AWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYKY 69
Query: 257 NPKGHYVYAMAETLSAKFEQMFQKL 281
NP H V +MA L FE F K+
Sbjct: 70 NPPDHEVVSMARMLQDVFEMHFAKI 94
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDT 354
A+ M+ +EK L + +LP E+LG+++ I++ R SL + + DEIE+D E L T
Sbjct: 222 AKPMNYDEKRQLSLDINKLPGEKLGRIVHIIQSREP---SLRNSNPDEIEIDFETLKPST 278
Query: 355 LSQLVRFV 362
L +L ++V
Sbjct: 279 LRELEKYV 286
>gi|296233153|ref|XP_002761896.1| PREDICTED: bromodomain-containing protein 4 [Callithrix jacchus]
Length = 985
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVDV +L L DY DIIK PMD+ T++ E K
Sbjct: 354 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKDVFEMRFAK 413
Query: 238 CPQEFAE 244
P E E
Sbjct: 414 MPDEREE 420
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 563 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 620
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 621 LRELERYVTSCLRKKRKPQAEK 642
>gi|320166235|gb|EFW43134.1| hypothetical protein CAOG_08266 [Capsaspora owczarzaki ATCC 30864]
Length = 1162
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 177 TKNAMRRCGEILTKLMK-DKQGWA--FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN 233
T ++ CG+ L + QG A F PVD + +YH+IIK PMD GT++ +
Sbjct: 521 TTKQLKFCGDTLKFITSGSNQGLANPFMEPVDPIKHHALNYHEIIKNPMDFGTIQRRFRQ 580
Query: 234 NVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
Y +FA+DVRL F+N L+YNP H+V MA LSA FE F L +Q
Sbjct: 581 KYYTNALDFADDVRLVFSNCLLYNPPDHFVADMARKLSAIFETRFLSLPQQ 631
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
++R L K KD W F+ PVD+ +L Y ++I+ PMD T+R+++ + Y +
Sbjct: 377 LKRLLPALFK--KDTAKW-FHKPVDLN--KLPHYREVIETPMDFSTIRARINSGYYPDAE 431
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
+D+ L F+N YN G V E + A +E++ ++
Sbjct: 432 ACRKDIELVFSNCFKYNAPGDNVTVAGEQVKAHYEKVLEE 471
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHG-DEIELDIEALDNDT 354
A M+ EK L + + LP E++G+++ I++ R L + DE+E+DI+A+D T
Sbjct: 1033 AVPMTYFEKQQLSKDIARLPAEKIGEVIHIIQSRTP---ELQANDPDEMEVDIDAMDPGT 1089
Query: 355 LSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDV 400
L L +FV + + + K+P Q A+ P ++KKG+
Sbjct: 1090 LRALEKFVKSVFQPAVAASAKKPPAKQRKDAIKKP----QAKKGNA 1131
>gi|431892496|gb|ELK02931.1| Bromodomain-containing protein 4 [Pteropus alecto]
Length = 1345
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKAR 297
F N +YN G + MAE L F Q +L ++ I+ GRG+ R
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGR 183
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 41/66 (62%)
Query: 216 DIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
DIIK PMD+ T++SKLE Y+ QEF DVRL F+N YNP H V AMA L FE
Sbjct: 392 DIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFE 451
Query: 276 QMFQKL 281
F K+
Sbjct: 452 MRFAKM 457
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 663
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 664 LRELERYVTSCLRKKRKPQAEK 685
>gi|324500947|gb|ADY40429.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 976
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C I+++L K W F PVDV L+L DY+DI+K+PMDLGT+R K+E Y
Sbjct: 173 MKYCQRIISELFSKKCKSFTWPFLEPVDVEGLKLHDYYDIVKQPMDLGTIRRKMEAKQYA 232
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+E ED+ L N YNP V+ +TL FE+ ++++
Sbjct: 233 SPEEMREDLLLVCENCFKYNPPSDPVHQHGKTLQKYFEEKWRQM 276
>gi|432110957|gb|ELK34430.1| Bromodomain testis-specific protein, partial [Myotis davidii]
Length = 842
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGT-----VRSKLE 232
+R C EIL +L K W F PVDV +L L +Y+DI+K PMDLG K++
Sbjct: 227 LRHCSEILKELFAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGNPEFLFTILKMD 286
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
N YK EFA DVRL F N YNP H V MA L FE F K+
Sbjct: 287 NQEYKDAYEFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFEMHFAKI 335
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
A+ MS +EK L + +LP ++LGK+L I+ R + S H D IE+D E L TL
Sbjct: 462 AKPMSHDEKRRLSLDINKLPGDKLGKVLHIIHSREPSLRN-SSHED-IEIDFETLKTTTL 519
Query: 356 SQLVRFVDNF--KKAEKDKTEKEPMCSQVAVAVAA 388
+L ++V K+ K EK P S AV + +
Sbjct: 520 RELEKYVAACLRKRPLKPHAEKTP-SSTAAVGIGS 553
>gi|378734234|gb|EHY60693.1| bromodomain-containing protein [Exophiala dermatitidis NIH/UT8656]
Length = 968
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 26/142 (18%)
Query: 143 PTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNT 202
PT ++Q GG G PK K+ + ++ C E+L +L K W N
Sbjct: 588 PTKRNQEFGG-------GRPKKKK----------YELQLKFCDEVLKELTATKY-WPINQ 629
Query: 203 ----PVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP 258
PVD V+L + Y IIKKPMDLGT+R+KL NNVY+ ++F EDVRL F N +NP
Sbjct: 630 YFTHPVDPVALNIPTYFQIIKKPMDLGTIRTKLNNNVYEKAKDFEEDVRLVFKNCYKFNP 689
Query: 259 KGHYVYAMAETLSAKFEQMFQK 280
+G V + L E++F K
Sbjct: 690 EGDLVNSAGHQL----EELFNK 707
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 175 TSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENN 234
T T + ++++ L K AF PVD V+L + Y ++IK PMDLGT+ +L+ N
Sbjct: 400 TVTPARLAHMKKVISNLKKSNASAAFRLPVDPVALNIPTYFEVIKHPMDLGTIDQRLKRN 459
Query: 235 VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
Y F D L +N + +N H V A + + F + L K
Sbjct: 460 EYTSVAAFISDFELIVDNCVKFNGPDHGVTQAARKMQSSFNSQMRNLPK 508
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K R ++ EK + + LP++++ + L I+ +NS + +EIELDIE + N
Sbjct: 822 KDRYVTFAEKQYISNGIAMLPEKQMQEALKII--QNSVPSLTNSDQNEIELDIEEVPNHA 879
Query: 355 LSQLVRFVDNF 365
L +L+ FV +
Sbjct: 880 LLKLLNFVKKY 890
>gi|195167198|ref|XP_002024421.1| GL14811 [Drosophila persimilis]
gi|194107794|gb|EDW29837.1| GL14811 [Drosophila persimilis]
Length = 678
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E D
Sbjct: 46 VMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIHDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIETMPKEE 144
>gi|242058181|ref|XP_002458236.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
gi|241930211|gb|EES03356.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
Length = 225
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 62/105 (59%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
A RC +L L++ GW F+ PVD +L LRDY+ ++ PMDLGTV +LE Y P
Sbjct: 59 AFGRCRALLDDLLRHDDGWVFDAPVDARALGLRDYYTVVADPMDLGTVLRRLERRRYVYP 118
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
FA+DVRLTF NA+ YN +G VY A LS FE + + +
Sbjct: 119 TAFADDVRLTFRNAMSYNDEGDPVYESAAELSGIFEARWASIEAE 163
>gi|324500843|gb|ADY40384.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 1194
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C I+++L K W F PVDV L+L DY+DI+K+PMDLGT+R K+E Y
Sbjct: 375 MKYCQRIISELFSKKCKSFTWPFLEPVDVEGLKLHDYYDIVKQPMDLGTIRRKMEAKQYA 434
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+E ED+ L N YNP V+ +TL FE+ ++++
Sbjct: 435 SPEEMREDLLLVCENCFKYNPPSDPVHQHGKTLQKYFEEKWRQM 478
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAED 245
E+L M+ K W F PVD V L L DYH +IK+PMD+ T+ +L N Y ++ +D
Sbjct: 125 EVLKPAMRHKHAWPFTKPVDAVRLSLPDYHKVIKRPMDMNTIEKRLRNVYYYSAKDCMQD 184
Query: 246 VRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +N V M + + + + + L Q+
Sbjct: 185 FEAIFANCYKFNQNEDDVSLMCKNIENLYREKIKLLPSQE 224
>gi|412988890|emb|CCO15481.1| bromodomain-containing protein [Bathycoccus prasinos]
Length = 947
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
++ C ++L + ++K W F PVD V L + DY++I+K PMDLG V+ KL+ Y P
Sbjct: 326 IKSCRDVLNHVKRNKFHWIFTQPVDAVKLGIPDYYEIVKNPMDLGKVKEKLDGKKYTWPT 385
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
+FA+D+RL F+N +YN M ET+ FE+ + K + +Q+
Sbjct: 386 DFADDMRLIFDNCALYNGTTTDAGQMGETVRGAFEEGWVKYNVEQK 431
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REM+ +EK AL SL+ELP+ + ++ IV++ + G GDEIE++IE LD+ TL
Sbjct: 569 REMTFDEKHALTMSLQELPESKQEMVITIVQEGQAAMGK--AEGDEIEINIEELDSKTLW 626
Query: 357 QLVRFVDNFKKAEKDK 372
+L R+ D+ + +K K
Sbjct: 627 RLQRYCDSQLRPKKSK 642
>gi|348688807|gb|EGZ28621.1| hypothetical protein PHYSODRAFT_537316 [Phytophthora sojae]
Length = 218
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 101/183 (55%), Gaps = 6/183 (3%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
++C +++ K + F V+ L DY ++K+PMDLGT+RSKL N YK P E
Sbjct: 7 KKCTDVVEHFFKLESCEPFRERVNWEEWGLYDYLQVVKEPMDLGTIRSKLGKNEYKKPAE 66
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR--EM 299
FA D+RL ++N +YN G +Y +A+ L+ KFE ++ + G + +
Sbjct: 67 FARDMRLVWDNCKLYNQDGSDLYLLADELAKKFE---DRVKAMKLDVGPVPKADKSIPAP 123
Query: 300 SLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLV 359
SLEEK+ +++ ++ ++LG ++ +++++ S DE+++ ++ +DN T L
Sbjct: 124 SLEEKIYFSQNIYKVAPKDLGSIVELLEEQCPKALDKS-SPDEVDIVVDNIDNKTFRDLE 182
Query: 360 RFV 362
+FV
Sbjct: 183 KFV 185
>gi|348670161|gb|EGZ09983.1| hypothetical protein PHYSODRAFT_460736 [Phytophthora sojae]
Length = 924
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 58/102 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+LTKLM + GW FN PVD V + DY DIIK PMDLGT++ +LE Y + FA DV
Sbjct: 120 LLTKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIKKRLEAEHYNSVEAFAGDV 179
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
RL F N + YN + A+ L A F + L Q ++Q
Sbjct: 180 RLVFENCIAYNSSTNKFNIAAKQLLASFNKSLASLKNQLEKQ 221
>gi|219117946|ref|XP_002179758.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408811|gb|EEC48744.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 2426
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%)
Query: 183 RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEF 242
+C ++ +L+ D+ GW F+ VD ++L L DY D++K PM L V+ KLEN +Y F
Sbjct: 1250 KCLPVIQELIDDQFGWVFHDAVDPIALGLPDYFDVVKHPMHLELVKKKLENAIYCDTDSF 1309
Query: 243 AEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
A DV L F NA++YN + V +A + KF Q+++KL
Sbjct: 1310 AHDVELVFENAILYNGETSEVGELANSFLVKFAQIYEKL 1348
>gi|444524033|gb|ELV13688.1| Epoxide hydrolase 3 [Tupaia chinensis]
Length = 941
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKSPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL---GRGKARE 298
F N +YN G + MAE L F Q +L ++ I+ GRG+ R+
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRK 184
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 32/55 (58%)
Query: 227 VRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
V+SKLE Y+ QEF DVRL F+N YNP H V AMA L FE F K+
Sbjct: 205 VKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 259
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K + MS EEK L + +LP E+LG+++ I++ R + + DEIE+D E L T
Sbjct: 399 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLK--NSNPDEIEIDFETLKPST 456
Query: 355 LSQLVRFVDN-FKKAEKDKTEK 375
L +L R+V + +K K + EK
Sbjct: 457 LRELERYVTSCLRKKRKPQAEK 478
>gi|292614925|ref|XP_002662470.1| PREDICTED: bromodomain-containing protein 2 [Danio rerio]
Length = 979
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVD +L L DYH+II +PMD+ T++ K+E Y
Sbjct: 273 LKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYT 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA D+RL F+N YNP GH V +MA L FE F K+
Sbjct: 333 DALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 46/88 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K W F PVD V L L DY+ IIK PMDL T+R +LENN Y E ED
Sbjct: 41 VIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDF 100
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
F N VYN G + MA+ L F
Sbjct: 101 NTMFTNCYVYNRPGDDIVLMAQVLEKLF 128
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQL 358
MS EEK L + +LP ++LGK++ I+K R +EIE+D E L TL L
Sbjct: 515 MSYEEKRQLSLDINKLPGDKLGKVVNIIKAREPLLRDTD--PEEIEIDFETLKPSTLRAL 572
Query: 359 VRFV 362
+V
Sbjct: 573 ECYV 576
>gi|301113438|ref|XP_002998489.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111790|gb|EEY69842.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 910
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 169 AGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVR 228
G ++T KN R +L KLM + GW FN PVD V + DY DIIK PMDLGT++
Sbjct: 99 CGHITITELKN---RLMPLLQKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIK 155
Query: 229 SKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
+LE Y + FA DVRL F N + YN + A+ L A F + L Q ++Q
Sbjct: 156 KRLEAEHYNSVEAFAGDVRLVFENCIAYNSSTNKFNIAAKQLLASFNKSLASLKNQLEKQ 215
>gi|357490537|ref|XP_003615556.1| Bromodomain-containing protein [Medicago truncatula]
gi|355516891|gb|AES98514.1| Bromodomain-containing protein [Medicago truncatula]
Length = 322
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 46/233 (19%)
Query: 175 TSTKNAMRRCGEIL----------TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
T +K A++R E + +++ KDK W F PVDV L L DY+ II+KPMD
Sbjct: 63 TGSKKALKRASEDMQAEMSDAFSFSQIAKDKWAWPFLDPVDVEGLGLYDYYQIIEKPMDF 122
Query: 225 GTVRSKLE---NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE------ 275
T++ ++E + YK +E DVRL F NA+ YN + + V+ MA+TL KFE
Sbjct: 123 STIKIRMEAKDGSGYKNVREIYADVRLIFKNAMKYNDEKNDVHVMAKTLLEKFENDLSKE 182
Query: 276 -----------------QMFQKLSKQQQRQGILGR-------GKAREMSLEEKMALGRSL 311
M ++LS + + + R + R++S EK+ L +
Sbjct: 183 EAHEELNKRLAQEATYANMTRELSTELSKVDMALRSLKTTAISQCRKLSHPEKLILANAF 242
Query: 312 EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDN 364
+L + + K L IVK+ N + D + LD+++ + TL +L FV N
Sbjct: 243 TKLSPDNIVKALEIVKE---SNPNFKDRIDMVTLDLDSQSDYTLFRLHMFVKN 292
>gi|38014413|gb|AAH60452.1| LOC398944 protein, partial [Xenopus laevis]
Length = 466
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++M K W F DV+ L DY D +K PMDLGT+R K+EN +YK
Sbjct: 293 LKHCNNILNEMMSKKHAEYAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKMENGLYK 350
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA DVRL F N YNP + V MA L FE MF K+
Sbjct: 351 DTQDFASDVRLMFMNCYKYNPPDNEVVNMARKLQDVFEGMFAKI 394
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + + W F PVD V L L DY+ IIK PMDL T+R +LE N Y + +D
Sbjct: 40 VLKSLWRHQFSWPFQQPVDAVKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG-RG 294
F N +YN G + MA+ L F + ++ ++ ++G RG
Sbjct: 100 NTMFTNCYIYNKPGDDIVLMAQELEKAFMEKIAEMPHEEIELSVVGNRG 148
>gi|68478269|ref|XP_716876.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
gi|68478390|ref|XP_716816.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438500|gb|EAK97830.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438562|gb|EAK97891.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
Length = 732
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 13/120 (10%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDII 218
PK K+ AA +R C + + +LM K + F PVD V+L + +Y++I+
Sbjct: 380 PKNKKVAA----------ELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIV 429
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
K+PMDLGT++SKL NN Y+ +F +DVRL F N ++NP+G V M L A F++ +
Sbjct: 430 KQPMDLGTIQSKLANNEYENADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKW 489
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 188 LTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVR 247
+ + ++++ F PVD V L + Y++ I +PMDL T+ K+ Y+ + +D
Sbjct: 222 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYEDVSQVVDDFN 281
Query: 248 LTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
L N +N + + MA + A+FE++ K+
Sbjct: 282 LMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKV 315
>gi|340381558|ref|XP_003389288.1| PREDICTED: bromodomain-containing protein 2-like [Amphimedon
queenslandica]
Length = 1057
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C I+ K W F PVDV L L DY DIIK+PMDL T++ KLE+ Y+
Sbjct: 456 LRYCLSIVKDFFSKKHQASAWPFYNPVDVKGLGLHDYLDIIKQPMDLTTLKKKLEDREYE 515
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P +FA D+RL F N YNP H V MA + FE F ++
Sbjct: 516 DPSQFAADMRLIFTNCYKYNPPEHDVVKMARKVQDIFEFKFARM 559
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 21/133 (15%)
Query: 144 TTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTP 203
TT+ + +GG R+ T L KN R + + W F+ P
Sbjct: 182 TTEEEGKGGGNRS--------------TNQLQYLKNVHR-------IIWRHHYAWPFHKP 220
Query: 204 VDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYV 263
VD V+L + DY +IIK+PMDL ++ +L++N Y +E +D + FNN YN V
Sbjct: 221 VDPVALNIPDYFNIIKRPMDLTLIKKQLDHNGYSSAKECIQDFKTMFNNCYTYNKPTDDV 280
Query: 264 YAMAETLSAKFEQ 276
M + L F+Q
Sbjct: 281 VFMCQALERLFDQ 293
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKR----NSGNGSLSCHGDEIELDIEALD 351
+ M+ +EK L + +LP L +++ I++ R GN DEIE+D E L
Sbjct: 706 VKPMTYDEKRQLSLDINKLPGVTLNRVVHIIQMRERTIKDGN------PDEIEIDFETLK 759
Query: 352 NDTLSQLVRFVDNFKKAEK 370
TL +L ++V++ K +K
Sbjct: 760 PATLRELEKYVNSVLKKQK 778
>gi|114108122|gb|AAI23311.1| LOC398944 protein [Xenopus laevis]
Length = 465
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++M K W F DV+ L DY D +K PMDLGT+R K+EN +YK
Sbjct: 293 LKHCNNILNEMMSKKHAEYAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKMENGLYK 350
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA DVRL F N YNP + V MA L FE MF K+
Sbjct: 351 DTQDFASDVRLMFMNCYKYNPPDNEVVNMARKLQDVFEGMFAKI 394
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + + W F PVD V L L DY+ IIK PMDL T+R +LE N Y + +D
Sbjct: 40 VLKSLWRHQFSWPFQQPVDAVKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG-RG 294
F N +YN G + MA+ L F + ++ ++ ++G RG
Sbjct: 100 NTMFTNCYIYNKPGDDIVLMAQELEKAFMEKIAEMPHEEIELSVVGNRG 148
>gi|449017171|dbj|BAM80573.1| similar to bromodomain containing transcription factor
[Cyanidioschyzon merolae strain 10D]
Length = 821
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVV--SLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
MR C +L ++MK K+ AF PVD + + DY +IIK+PMDLGTVR KLE+ Y
Sbjct: 336 MRFCARVLKEIMKMKEARAFLLPVDKLWNPDAIPDYFEIIKQPMDLGTVRQKLESGEYGT 395
Query: 239 -PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+ F DVRL ++NA+ YNP Y +A+ L+ FE+ Q L
Sbjct: 396 DPEAFRRDVRLVWSNAMTYNPPDSEYYNIAKMLNEAFERKMQFL 439
>gi|223993693|ref|XP_002286530.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977845|gb|EED96171.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 5/168 (2%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD +L L DY ++KKPMDLG V+ KL + YK + A+DVRL + N + YN
Sbjct: 24 FREPVDYKALGLVDYPLVVKKPMDLGQVKKKLNESKYKSIHDAADDVRLIWKNCMTYNAD 83
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSL-----EEKMALGRSLEEL 314
G Y +A+T++ KFE+ F KL +Q G K E E+K + L ++
Sbjct: 84 GSDFYLLAQTMAKKFEEKFAKLVEQFGEAAGDGGDKNGEDDYEDPTPEDKRTFAKLLYKI 143
Query: 315 PQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
+EELG ++ + + + DE+E++++ + +L+ +V
Sbjct: 144 TKEELGNVITDLDAKCPKALVKNSAEDEVEINVDVISPKIFDELLSYV 191
>gi|238882433|gb|EEQ46071.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 709
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 13/120 (10%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDII 218
PK K+ AA +R C + + +LM K + F PVD V+L + +Y++I+
Sbjct: 357 PKNKKVAA----------ELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIV 406
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
K+PMDLGT++SKL NN Y+ +F +DVRL F N ++NP+G V M L A F++ +
Sbjct: 407 KQPMDLGTIQSKLANNEYENADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKW 466
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 188 LTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVR 247
+ + ++++ F PVD V L + Y++ I +PMDL T+ K+ Y+ + +D
Sbjct: 199 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYEDVSQVVDDFN 258
Query: 248 LTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
L N +N + + MA + A+FE++ K+
Sbjct: 259 LMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKV 292
>gi|426023907|sp|F1QW93.2|BRDT_DANRE RecName: Full=Bromodomain testis-specific protein
Length = 918
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++ K W F PVD +L L DYH+II +PMD+ T++ K+E Y
Sbjct: 273 LKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYT 332
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA D+RL F+N YNP GH V +MA L FE F K+
Sbjct: 333 DALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 46/88 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K W F PVD V L L DY+ IIK PMDL T+R +LENN Y E ED
Sbjct: 41 VIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDF 100
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
F N VYN G + MA+ L F
Sbjct: 101 NTMFTNCYVYNRPGDDIVLMAQVLEKLF 128
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQL 358
MS EEK L + +LP ++LGK++ I+K R +EIE+D E L TL L
Sbjct: 506 MSYEEKRQLSLDINKLPGDKLGKVVNIIKAREPLLRDTD--PEEIEIDFETLKPSTLRAL 563
Query: 359 VRFV 362
+V
Sbjct: 564 ECYV 567
>gi|194756116|ref|XP_001960325.1| GF13298 [Drosophila ananassae]
gi|190621623|gb|EDV37147.1| GF13298 [Drosophila ananassae]
Length = 253
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 184 CGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C I+ +L + W F P+D L L DYH+++K+PMDL TVR ++ + Y+
Sbjct: 13 CKAIIKRLFANSYKHLAWIFYEPLDAQLLALYDYHEVVKEPMDLSTVRHRVNSGCYQSAA 72
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLS 282
+FA+DVRL F N +Y GH Y MA+ L FE+MF +++
Sbjct: 73 DFAKDVRLIFYNTYLYTKPGHLCYEMAKKLQIVFEEMFAQVA 114
>gi|67481051|ref|XP_655875.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56473058|gb|EAL50506.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449705918|gb|EMD45867.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 265
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C ++ +LMK + F PVD + +Y DIIK PMDLGTV K++ N+Y EF+
Sbjct: 69 CMSVMKQLMKVSESEVFMEPVDPEIWNIPNYFDIIKTPMDLGTVIKKIKKNMYYSIDEFS 128
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ-----QQRQGILGRGK--- 295
DVRLTF NA+ +NP G+YV++ AE L FE ++ ++ ++ IL K
Sbjct: 129 NDVRLTFTNAMTFNPPGNYVHSYAEKLYKIFENYYRHCIRELNHHLKEENNILQSKKKYS 188
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVK 327
+ ++ E L + ++ +P E L + +++
Sbjct: 189 QKPLNRSEIHYLTQKMKNIPLECLNDVCEVLE 220
>gi|308498241|ref|XP_003111307.1| CRE-BET-1 protein [Caenorhabditis remanei]
gi|308240855|gb|EFO84807.1| CRE-BET-1 protein [Caenorhabditis remanei]
Length = 856
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
Query: 180 AMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
+++ C ++L++ K W F+ PV+ L L DYH IIK+PMD+ T++ KLE Y
Sbjct: 246 SLKPCSKLLSEFFSKKYNEFTWPFHDPVNAAELGLHDYHKIIKEPMDMKTIKRKLECGEY 305
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
K P +F D+RL NN +YNP G V+ KFE++F K
Sbjct: 306 KEPADFERDIRLMLNNCFIYNPIGDPVH----NFGKKFEEVFDK 345
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K K W F PVD V+L + YH+ + +PMDL T+ S+L++ Y C QE +D+
Sbjct: 51 VLKEAAKHKHVWPFQKPVDAVTLCIPLYHERVLRPMDLKTIESRLKSTYYTCAQECIDDI 110
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
FNN +N K V MA+ + ++ ++ +++
Sbjct: 111 ETVFNNCYTFNGKEDDVTIMAQNVHEVIKKSLEQAPREEH 150
>gi|407043630|gb|EKE42060.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 265
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 60/96 (62%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C ++ +LMK + F PVD + +Y DIIK PMDLGTV K++ N+Y EF+
Sbjct: 69 CMSVMKQLMKVSESEVFMEPVDPEIWNIPNYFDIIKTPMDLGTVIKKIKKNMYYSIDEFS 128
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ 279
DVRLTF NA+ +NP G+YV++ AE L FE ++
Sbjct: 129 NDVRLTFTNAMTFNPPGNYVHSYAEKLYKIFENYYR 164
>gi|195429272|ref|XP_002062687.1| GK19581 [Drosophila willistoni]
gi|194158772|gb|EDW73673.1| GK19581 [Drosophila willistoni]
Length = 293
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 184 CGEILTKLMK---DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C +L LM K W F PVD +L L DY +I+K+PMD GT++ +L+ + YK
Sbjct: 19 CKVLLKNLMSPTYKKLAWIFYEPVDPQTLGLDDYLEIVKEPMDFGTIKQRLDADDYKDAM 78
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA+DVRL F NA +Y H Y MA+ L FE+MF +L
Sbjct: 79 EFAKDVRLIFFNAYLYTNSDHVCYKMAKELQLIFEKMFTEL 119
>gi|340503660|gb|EGR30201.1| hypothetical protein IMG5_138200 [Ichthyophthirius multifiliis]
Length = 251
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 110/226 (48%), Gaps = 39/226 (17%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
K +++ +++++L + + F PVD SL+L DY IIK PMDL VR KL+ N Y
Sbjct: 14 KEELKKLNQMVSQLFANSDSYEFRQPVDWQSLQLLDYPTIIKNPMDLSKVREKLKENQYV 73
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF------------------- 278
+E +D++L ++N YN +G ++Y ++E L F M
Sbjct: 74 YVEECFDDIQLIWDNCKNYNAEGSWIYKLSEKLEKYFRNMIKNYIPSIQFQIQIMKKEKL 133
Query: 279 -------------QKLSK---QQ---QRQGILGRGKAREMSLEEKMALGRSLEELPQEEL 319
Q LSK QQ Q Q ++ + + MSL+E ++ + ++ LP E++
Sbjct: 134 VQMKKQEKAAPIQQNLSKNTSQQQIAQEQIVVAKEEQVPMSLQETLSFSQKIKSLPAEQI 193
Query: 320 GKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNF 365
G ++ ++ + +S ++ ++ ++ +D DT ++ + +D +
Sbjct: 194 GMIVHMI-QNSSSQAYKDIDKEKCQIHVDLIDRDTFKKINQQIDMW 238
>gi|299116970|emb|CBN75074.1| hypothetical protein Esi_0066_0081 [Ectocarpus siliculosus]
Length = 1147
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 68/117 (58%), Gaps = 13/117 (11%)
Query: 143 PTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKL--MKDKQGWAF 200
P ++ +R SK N GN GT LT + +RRC +L L ++ K W F
Sbjct: 670 PPSRRVSRTPSKLINDIGND-------GTTHLT---HGLRRCVTVLNNLRAIRGKSEW-F 718
Query: 201 NTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYN 257
N PVD V L L +Y IIK+PMDLGTV+SKLE+ YK EFA +VRL F+NA YN
Sbjct: 719 NEPVDYVGLNLPEYTTIIKRPMDLGTVKSKLESGEYKNTVEFAHEVRLVFSNACHYN 775
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQL 358
++ +EK AL ++ L Q L +++ I++ R L +EIELDI+++DN TL L
Sbjct: 1063 LTFDEKKALSVAINNLDQSNLTRVVEIIQARMP----LGSSDEEIELDIDSMDNLTLRDL 1118
Query: 359 VRFVDNF 365
F+ +
Sbjct: 1119 QGFIKDV 1125
>gi|255641563|gb|ACU21055.1| unknown [Glycine max]
Length = 363
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NNVYK 237
MR+ IL ++ + K W F PVDV L L DY++II KPMD GT++SK+E Y
Sbjct: 91 MRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKPMDFGTIKSKMEAKDGTGYN 150
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+E DVRL F NA+ YN + + V+ MA+TL KFE+ + +L
Sbjct: 151 NVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKWLQL 194
>gi|422294825|gb|EKU22125.1| bromodomain containing protein [Nannochloropsis gaditana CCMP526]
Length = 227
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 94/166 (56%), Gaps = 3/166 (1%)
Query: 199 AFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP 258
AF PVD +L L DY +I PMDLGT++ +LE+ Y + AEDVRL +NN YN
Sbjct: 24 AFLEPVDWKTLGLTDYPLVISTPMDLGTIKGRLESGHYTKHAQVAEDVRLVWNNCKTYNQ 83
Query: 259 KGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLEELPQEE 318
+G Y+Y +A+ L+ KFE+ + K+ K ++ G + + SLE+K ++ + ++
Sbjct: 84 EGSYLYKIADKLAGKFEEKYSKI-KTEEPDG--PEDENQPPSLEDKRQFRENMYRITSDQ 140
Query: 319 LGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDN 364
LG+++ ++++ + + DEIE++I+ + T L + N
Sbjct: 141 LGEIVQTLEQQCPEAIAKVGNQDEIEINIDKVAPRTFHFLANLIKN 186
>gi|356526669|ref|XP_003531939.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 367
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NNVYK 237
MR+ IL ++ + K W F PVDV L L DY++II KPMD GT++SK+E Y
Sbjct: 91 MRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKPMDFGTIKSKMEAKDGTGYN 150
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+E DVRL F NA+ YN + + V+ MA+TL KFE+ + +L
Sbjct: 151 NVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKWLQL 194
>gi|326490245|dbj|BAJ84786.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 352
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 49/230 (21%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NNV 235
+ MR+ I+ ++ + F PVDVV L+L DY+ II KPMD T+++K+E
Sbjct: 85 DLMRQLAGIIRQITSHEWSAPFLQPVDVVGLQLDDYYKIITKPMDFSTIQNKMEGKDGTK 144
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE----QMFQKLSKQQQRQGI- 290
YK +E DVRL F NA+ YN + H V+ MA+ L KFE Q+ K+ ++++Q +
Sbjct: 145 YKSVREIYSDVRLIFTNAMTYNDELHDVHIMAKLLLEKFEEKWLQLLPKVENEERKQQME 204
Query: 291 --------------------------------------LGRGKAREMSLEEKMALGRSLE 312
+ + ++M+ +EK LG L
Sbjct: 205 TNDAPTTDTSPEDAIAQLAKDTDDELNEINKQLEELRNMVVQRCKKMTTDEKRKLGAGLC 264
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
L E+ K L +V + N +E++LD++A TL +L FV
Sbjct: 265 HLTPEDFSKALELVAQ---DNPDFQTTAEELDLDMDAQSETTLWRLKFFV 311
>gi|323447957|gb|EGB03862.1| hypothetical protein AURANDRAFT_55416 [Aureococcus anophagefferens]
Length = 628
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L +++ + F PVD +L L DYHD++K PMDLGTV +L Y PQ+ +DV
Sbjct: 320 LLKHVVQQPSSYPFMAPVDAEALGLADYHDVVKAPMDLGTVERRLGGGSYANPQKLVDDV 379
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL--GRGKAREMSL 301
RLTF NA YNP H V+ A L FE+ Q L ++ + G L R RE L
Sbjct: 380 RLTFANAQKYNPPAHPVHEAATHLGCVFEKKLQNLLQRLKSAGQLDDARKFLREFPL 436
>gi|290985307|ref|XP_002675367.1| bromodomain-containing protein [Naegleria gruberi]
gi|284088963|gb|EFC42623.1| bromodomain-containing protein [Naegleria gruberi]
Length = 718
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 188 LTKLM----KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
L KLM K K W FN PVD V L++ DY D+IK PMDLGTV K+ NN Y +F
Sbjct: 187 LQKLMGIVKKHKWSWPFNNPVDPVQLQIPDYFDVIKNPMDLGTVEKKVNNNEYMDVYQFL 246
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
+DVR+ ++N +YNP +Y MA+ + F + + K
Sbjct: 247 DDVRVIWSNCYLYNPVDSDIYKMAKEVEKYFNEKYVK 283
>gi|358340347|dbj|GAA29956.2| bromodomain-containing protein 3 [Clonorchis sinensis]
Length = 1466
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 131/317 (41%), Gaps = 87/317 (27%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A+++C IL+++ + F PVD S+ L DYH+I+KKPMDL TV+ KL++ Y
Sbjct: 1117 ALKQCSNILSEISSYRYKELNHFFIKPVDARSMGLHDYHNIVKKPMDLHTVKVKLDSGQY 1176
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE--------------QMFQKLS 282
+FAEDVRL F N YN + V + + LS FE Q+ Q
Sbjct: 1177 HTRSDFAEDVRLIFTNCYKYNGESSDVGKIGKVLSGIFEDFLSKVPADNEDLDQLIQNSI 1236
Query: 283 KQQQRQGI--------LGRGKAREMSL------EEKMALGRSL----------------- 311
K+ QR + L R A S+ + K AL S
Sbjct: 1237 KEHQRLTVQFQQCNDELQRSTAELSSILNTLNSQAKRALHHSTVPVPNSTEVSGYPQSIM 1296
Query: 312 ------EELPQ-----------------------EELGKLLGIVKKRNSGNGSLSCHGDE 342
EE+P+ E+LG+++ I+++ + C+ DE
Sbjct: 1297 CGYEIDEEMPERNVQLMTYDEKRQLSLDINKLPGEKLGQVIQIIQQHEPSHR--DCNPDE 1354
Query: 343 IELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAPVVIERSKKGDVAA 402
IELD E L + TL +L ++V + K M S+ V V E+S+ + A
Sbjct: 1355 IELDFETLQHTTLRELEQYVKAVLRNAK-------MSSRKVVKKDTLVTPEKSRDVSLTA 1407
Query: 403 EEEVDIGEEIPVQNYPP 419
+ +I IP PP
Sbjct: 1408 KAR-EIENRIPKTPEPP 1423
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C IL + + F PVD ++ L DYHD++KK MDL TV++KLE Y
Sbjct: 176 ALKACSNILKDISSQRYRDLNHLFLKPVDAEAMGLHDYHDVVKKAMDLSTVKTKLETGQY 235
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA+D+RL FNN YN + V + + L A FE+ F K+
Sbjct: 236 HSKYEFADDIRLMFNNCYKYNGEDSDVAKVGKLLQAIFEESFAKV 280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAED 245
E++ +L+K+K W F VD L L DY I+K PMDLGT++ +L Y E +D
Sbjct: 919 EVINRLLKEKYVWPFTRLVDHERLNLPDYPKIVKHPMDLGTIKQRLNLKFYHSSVECFDD 978
Query: 246 VRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
+ F N ++N G + MA K EQ+ ++L K
Sbjct: 979 LFTMFRNCYIFNKPGDDIVGMA----VKLEQLARELLK 1012
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 291 LGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEAL 350
+ R M+ +EK L + +LP E+LG+++ I+++R + C+ DEIE+D E L
Sbjct: 425 MSENNVRPMTYDEKRQLSIDINKLPGEKLGRVVQIIQQREPSHRD--CNPDEIEIDFETL 482
Query: 351 DNDTLSQLVRFVDNFKKAEKDKTEK 375
+ TL +L ++V + + K + K
Sbjct: 483 QHTTLRELEKYVKSVLQKAKSGSRK 507
>gi|241955217|ref|XP_002420329.1| bromodomain-containing transcription factor, putative; protein
involved in transcription initiation at TATA-containing
promoters, putative [Candida dubliniensis CD36]
gi|223643671|emb|CAX41404.1| bromodomain-containing transcription factor, putative [Candida
dubliniensis CD36]
Length = 721
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDII 218
PK K+ AA +R C + + +LM K + F PVD V+L + +Y++I+
Sbjct: 367 PKNKKVAA----------ELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIV 416
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
K PMDLGT++SKL NN Y+ +F +DVRL F N ++NP+G V M L A F++ +
Sbjct: 417 KHPMDLGTIQSKLANNEYENADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKW 476
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 188 LTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVR 247
+ + ++++ F PVD V L + Y++ I +PMDL T+ K+ Y+ + +D
Sbjct: 207 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYENVSQVVDDFN 266
Query: 248 LTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
L N +N + + MA + A+FE++ K+
Sbjct: 267 LMVKNCKKFNGEAAGISKMAMNIQAQFEKLMVKV 300
>gi|356558209|ref|XP_003547400.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 349
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 34/218 (15%)
Query: 73 DPTSNVHFKKTPTPAQPQSLPESDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRI- 131
DPT +V TP+P ++ E D +F Y E + ++L + V+ S I
Sbjct: 2 DPTLDV---STPSP----NVIEEDLNSFWQSIY---ENSNKVQKLEEQVAEVQKFYSTIN 51
Query: 132 -----ANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGE 186
A + H T +SQ G S+ AN S + K M +
Sbjct: 52 DQVNDAKDKGREKHVIGTKRSQQGGSSREAN---------------SSNTMKEVMHQFSI 96
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL---ENNVYKCPQEFA 243
I ++ + W F PVDV L L DY+ II+KPMD GT++ K+ + + YK +E
Sbjct: 97 IFHQITHQRWAWPFMEPVDVEGLGLHDYYQIIEKPMDFGTIKRKMNAKDGSGYKNVREIY 156
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
DVRL F NA+ YN + + V+ MA+TL KFE+ + +L
Sbjct: 157 SDVRLVFENAMKYNGEKNDVHIMAKTLLEKFEKKWLQL 194
>gi|63100516|gb|AAH95028.1| Wu:fi25h02 protein, partial [Danio rerio]
Length = 600
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 175 TSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL 231
T ++ C IL ++ K W F PVD +L L DYH+II +PMD+ T++ K+
Sbjct: 267 TKLSERLKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKM 326
Query: 232 ENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
E Y +FA D+RL F+N YNP GH V +MA L FE F K+
Sbjct: 327 EAREYTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 52/99 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K W F PVD V L L DY+ IIK PMDL T+R +LENN Y E ED
Sbjct: 41 VIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDF 100
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G + MA+ L F + ++ +++
Sbjct: 101 NTMFTNCYVYNRPGDDIVLMAQVLEKLFLEKVAEMPEEE 139
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQL 358
MS EEK L + +LP ++LGK++ I+K R +EIE+D E L TL L
Sbjct: 515 MSYEEKRQLSLDINKLPGDKLGKVVNIIKAREPLLRDTD--PEEIEIDFETLKPSTLRAL 572
Query: 359 VRFV 362
+V
Sbjct: 573 ECYV 576
>gi|213405871|ref|XP_002173707.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001754|gb|EEB07414.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 596
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 143 PTTKSQNRGGSK--------RANPFGNPKAKRAAAGTXSLTSTKNA-------MRRCGEI 187
PT K++ RG + R+ +P A + TK+ MR C I
Sbjct: 175 PTKKTKRRGSTASSTSTAETRSRKLHSPAVSVPAPPVAVVNDTKSQRRKLSSQMRFCSTI 234
Query: 188 LTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAE 244
+ +L K + + F PVD V+ DY DIIK PMDL TV+ KL N Y+ P +F
Sbjct: 235 IKELHKRQYSTFAYPFYQPVDPVACDCPDYFDIIKHPMDLSTVQKKLNNGEYETPSDFEA 294
Query: 245 DVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
D+RL FNN YNP G V+ M L A F++ +
Sbjct: 295 DIRLIFNNCYTYNPVGTPVHEMGRKLEAVFDEKW 328
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 149 NRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVS 208
++ S RAN +KR T T + C I+ +L + K F PVD V
Sbjct: 39 SQADSARANQLAVDASKRKYD-----TMTPAQHKYCLAIVRQLKRTKDSIPFRAPVDPVK 93
Query: 209 LRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAE 268
+ DY IIK PMDLGT+ +L ++Y QEF +D+RL F+N YN V M +
Sbjct: 94 QNIPDYPTIIKHPMDLGTIEKRLTGHIYNSAQEFIDDMRLMFSNCFTYNGTTSPVGVMGK 153
Query: 269 TLSAKFEQMFQKL 281
+ FE+ ++L
Sbjct: 154 NIETIFERQLKQL 166
>gi|260943750|ref|XP_002616173.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
gi|238849822|gb|EEQ39286.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
Length = 613
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 68/103 (66%), Gaps = 7/103 (6%)
Query: 181 MRRCGEILTKLMKDK---QGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +++ +LM K + F PVD V+L + +Y DI+K+PMDLG++++KL NN Y+
Sbjct: 284 LRFCNQVIKELMSKKFYSINFPFLQPVDPVALNIPNYFDIVKEPMDLGSIQTKLANNQYE 343
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
EF +DVRL F N ++NP+G+ V++M + L EQ+F K
Sbjct: 344 NGDEFEKDVRLVFKNCYLFNPEGNDVHSMGQRL----EQVFDK 382
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVDVV L + Y++ IK+PMDL T+ KL N Y+ P + +D L +N L +N +
Sbjct: 139 FLHPVDVVKLNVPLYYNYIKRPMDLSTIERKLNLNAYEDPSQVVDDFNLMVSNCLRFNGE 198
Query: 260 GHYVYAMAETLSAKFEQ 276
+ MA+ + A+FE+
Sbjct: 199 NSGISRMAKNIQAQFEK 215
>gi|47209011|emb|CAF91369.1| unnamed protein product [Tetraodon nigroviridis]
Length = 530
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C +L +++ K W F PVD +L+L DYHDIIK PMDL TV+ K++ Y
Sbjct: 261 LKFCNVLLKEMLSKKHAAYAWPFYEPVDAEALQLHDYHDIIKYPMDLSTVKRKMDGGEYP 320
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
FA DVRL F+N YNP V A A+ L FE+ F K+
Sbjct: 321 DADSFAADVRLIFSNCYRYNPAQLEVVAQAKKLQGVFEKSFAKI 364
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + W F PVD V+L L DYH II PMDLGT++ +LENN Y E +D
Sbjct: 40 VVKSLWRHHYAWPFYEPVDAVALGLSDYHKIITSPMDLGTIKKRLENNYYWTASECLQDF 99
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA TL F Q ++ +++
Sbjct: 100 NTMFTNCYIYNKPTDDIVLMALTLEKIFLQKVGQMPQEE 138
>gi|134105429|pdb|2OUO|A Chain A, Crystal Structure Of The Bromo Domain 2 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|340707485|pdb|2YEM|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|340707486|pdb|2YEM|B Chain B, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
Length = 130
Score = 90.1 bits (222), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
P +++ A S + ++ C IL ++ K W F PVDV +L L DY DII
Sbjct: 6 PDSQQHPAPEKS-SKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDII 64
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
K PMD+ T++SKLE Y+ QEF DVRL F+N YNP H V AMA L FE F
Sbjct: 65 KHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 124
Query: 279 QKLSKQ 284
K+ +
Sbjct: 125 AKMPDE 130
>gi|395759239|pdb|2LSP|B Chain B, Solution Structures Of Brd4 Second Bromodomain With
Nf-Kb-K310ac Peptide
Length = 128
Score = 90.1 bits (222), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
P +++ A S + ++ C IL ++ K W F PVDV +L L DY DII
Sbjct: 4 PDSQQHPAPEKS-SKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDII 62
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
K PMD+ T++SKLE Y+ QEF DVRL F+N YNP H V AMA L FE F
Sbjct: 63 KHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 122
Query: 279 QKLSKQ 284
K+ +
Sbjct: 123 AKMPDE 128
>gi|66800045|ref|XP_628948.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|74896738|sp|Q54BA2.1|Y3800_DICDI RecName: Full=Ankyrin repeat, bromo and BTB domain-containing
protein DDB_G0293800
gi|60462310|gb|EAL60533.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 806
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C ++ + K K AF PVD ++ + DY D+IK PMDLGT++ KL+NN Y ++FA
Sbjct: 525 CKGLINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFA 584
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
DVRL F NAL YN V+ A+TL F+Q F
Sbjct: 585 ADVRLMFENALTYNADSSPVWKHAKTLLNAFDQKF 619
>gi|302782720|ref|XP_002973133.1| hypothetical protein SELMODRAFT_413595 [Selaginella moellendorffii]
gi|300158886|gb|EFJ25507.1| hypothetical protein SELMODRAFT_413595 [Selaginella moellendorffii]
Length = 585
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 178 KNAMRRCGEILTKLMK-DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
K+A + +L L K+GW F PV + L DY +I+KPMDLGTV+S++++ Y
Sbjct: 204 KDAWDKALRVLEDLRNYSKEGWVFCQPVQSLWPELVDYTKVIEKPMDLGTVKSRVQSKYY 263
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
P+ FA DVRLTF+NA+ +N G + +A + KFE F+ + + R
Sbjct: 264 SSPKGFARDVRLTFDNAIRFNAAGSMYHKLALKMRQKFETAFKAVERLYNR 314
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 291 LGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEAL 350
L G R +S +EK L ++ P++ + K++ IV +++ E+ELD++ L
Sbjct: 405 LAYGGCRLLSAKEKAKLSELVDSFPEDRMRKVIEIVGEKHPE----LVGAPEVELDLDKL 460
Query: 351 DNDTLSQLVRFVDNFKKAE 369
D +TL L R N++K++
Sbjct: 461 DKNTLFNLYRLAMNWQKSK 479
>gi|301118124|ref|XP_002906790.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108139|gb|EEY66191.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 218
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 102/185 (55%), Gaps = 10/185 (5%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
++C +++ K + F V+ L DY ++K+PMDLGT+RSKL N +K P E
Sbjct: 7 KKCTDVVEHFFKLESCEPFRERVNWEEWGLYDYLQVVKEPMDLGTIRSKLSKNEHKKPAE 66
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREM-- 299
FA D+RL ++N +YN G +Y +A+ L+ KFE + + + + KA +
Sbjct: 67 FARDMRLVWSNCKLYNQDGSDLYLLADELAKKFEDRVKSM-----KLDVGPVPKADKSIP 121
Query: 300 --SLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQ 357
SLEEK+ +++ ++ ++LG ++ +++++ S DE+++ ++ +DN T
Sbjct: 122 APSLEEKIYFSQNIYKVNPKDLGAIVQLLQEQCPKALDKS-SPDELDIVVDHIDNKTFRD 180
Query: 358 LVRFV 362
L +FV
Sbjct: 181 LEKFV 185
>gi|448085671|ref|XP_004195918.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359377340|emb|CCE85723.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 637
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C + L +L K + F TPVD V+L + +YH+IIK+PMDL TV+SKL NN Y+
Sbjct: 312 LRFCNQTLKELTSKKHYSYSFPFLTPVDAVALNIPNYHEIIKEPMDLSTVQSKLANNQYE 371
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
EF DVRL F N +NP+G V M L + F++ +
Sbjct: 372 NGDEFEHDVRLIFKNCYTFNPEGTDVNMMGHRLESVFDKKW 412
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD V L + Y++ IK+PMDL T+ K+ N Y+ P + +D L +N + +N +
Sbjct: 168 FLHPVDTVKLNVPLYYNYIKRPMDLSTIERKIAVNAYEDPSQVVDDFNLMVSNCIKFNGE 227
Query: 260 GHYVYAMAETLSAKFEQ 276
+ MA+ A FE+
Sbjct: 228 NSGISKMAKNTQAHFEK 244
>gi|194763657|ref|XP_001963949.1| GF20989 [Drosophila ananassae]
gi|190618874|gb|EDV34398.1| GF20989 [Drosophila ananassae]
Length = 907
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK PMD+GT++ +LENN Y +E D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKHPMDMGTIKKRLENNYYWSAKEAIHDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
FNN VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIELMPKEE 144
>gi|448081188|ref|XP_004194827.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359376249|emb|CCE86831.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 645
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C + L +L K + F TPVD V+L + +YH+IIK+PMDL TV+SKL NN Y+
Sbjct: 320 LRFCNQTLKELTSKKHYSYSFPFLTPVDAVALNIPNYHEIIKEPMDLSTVQSKLANNQYE 379
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
EF DVRL F N +NP+G V M L + F++ +
Sbjct: 380 NGDEFERDVRLIFKNCYTFNPEGTDVNMMGHRLESVFDKKW 420
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD V L + Y++ IK+PMDL T+ KL N Y+ P + +D L +N + +N +
Sbjct: 176 FLHPVDTVKLNVPFYYNYIKRPMDLSTIERKLAVNAYEDPSQVVDDFNLMVSNCIKFNGE 235
Query: 260 GHYVYAMAETLSAKFEQ 276
+ MA+ A FE+
Sbjct: 236 NSGISKMAKNTQAHFEK 252
>gi|167526004|ref|XP_001747336.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774171|gb|EDQ87803.1| predicted protein [Monosiga brevicollis MX1]
Length = 1632
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 52/89 (58%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L +L F PVD + L + DY +IIKKPMDL T+ KLE YK P EF +D+
Sbjct: 614 VLERLKGMSAAECFLRPVDPIELNIPDYFEIIKKPMDLSTIEDKLEKGTYKDPWEFCDDM 673
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFE 275
RL F NA YNPK H VY +S+ FE
Sbjct: 674 RLMFKNAWTYNPKNHVVYKFTNEVSSVFE 702
>gi|268564300|ref|XP_002639068.1| C. briggsae CBR-TAG-332 protein [Caenorhabditis briggsae]
Length = 747
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C ++L + K W F PVD ++ L DYH+IIK PMD+ T++ KLE YK
Sbjct: 253 MKPCIKLLAEFYNKKYQEFAWVFYEPVDAATMGLHDYHNIIKHPMDMKTIKKKLEAGQYK 312
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
P EF D+RL NN L YNP G V + +F+++F K
Sbjct: 313 EPAEFESDIRLMINNCLTYNPVGDPV----NSFGLRFQEVFNK 351
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K K W F PVD +L + YH+ I +PMDL T+ S+L++ Y QE +D+
Sbjct: 51 VLKEAAKHKHVWPFQKPVDAHTLCIPLYHERITRPMDLKTIESRLKSVYYTSAQECIDDI 110
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI 290
F N ++N K V MA+ + ++ ++ + + +
Sbjct: 111 EQVFQNCYMFNGKEDDVTIMAQNVHEVIKKSLEQAPRDEHEMDV 154
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKR-NSGNGSLSCHGDEIELDIEALDNDTLSQ 357
+S +EK L + LP + L ++ I+ +R NS S EIELD E+L + L +
Sbjct: 528 LSYDEKRNLSHEVNRLPPQHLSTIIAIITRRDNSALNHQSIDESEIELDFESLGDMCLRE 587
Query: 358 LVRFVDNFKKAEKDKTEKEPMCSQVAVAVAA 388
+ F+ E +K + P+ Q A A+
Sbjct: 588 MSAFMKTLGVKE-EKAPELPVTQQKAPRAAS 617
>gi|255565481|ref|XP_002523731.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223537035|gb|EEF38671.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 532
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ + +C ++ LM GW F PV+ L++ II PMDLGTV+SKLEN+ Y
Sbjct: 79 RSVIHQCASLVKSLMDHPCGWVFKEPVNPDKLKI-----IITNPMDLGTVKSKLENDRYF 133
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
+EFA DVRLTF+NAL+ NP + V+ MAE L FE + L ++
Sbjct: 134 RIEEFAADVRLTFSNALLCNPPPNCVHKMAEKLKRIFETRWNALEEK 180
>gi|428171952|gb|EKX40865.1| hypothetical protein GUITHDRAFT_75230, partial [Guillardia theta
CCMP2712]
Length = 87
Score = 89.0 bits (219), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 204 VDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYV 263
VD ++L + Y +IIK PMDLGTVRSKL + YK FA DVRLTF+NA+++NP GH+V
Sbjct: 1 VDPIALDIPTYFEIIKHPMDLGTVRSKLISGSYKDINAFAADVRLTFDNAMLFNPVGHWV 60
Query: 264 YAMAETLSAKFEQMFQK-LSKQQQRQ 288
+ MA+ L + FE FQ+ LS+ ++Q
Sbjct: 61 HEMAKNLKSFFESNFQEHLSRTGKKQ 86
>gi|428178605|gb|EKX47480.1| hypothetical protein GUITHDRAFT_50108, partial [Guillardia theta
CCMP2712]
Length = 90
Score = 89.0 bits (219), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK-CPQEFAE 244
E+L K+ DK W F PVD L+L+DYH I+K+PMDL T+RS+L+ YK +EF
Sbjct: 1 EVLDKVSNDKHAWPFEEPVDAKKLKLKDYHKIVKEPMDLSTIRSRLQGEEYKRVEEEFHR 60
Query: 245 DVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
D+ L F+NAL++N +G ++ AE L KF
Sbjct: 61 DMHLVFDNALLFNHEGDPIHEYAEQLKMKF 90
>gi|167381013|ref|XP_001735535.1| bromodomain-containing factor [Entamoeba dispar SAW760]
gi|165902414|gb|EDR28252.1| bromodomain-containing factor, putative [Entamoeba dispar SAW760]
Length = 388
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 67/110 (60%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
T +R+C E+ KLM + AFNTPVD V+L++ Y +IK+PMDLGT++ L + Y
Sbjct: 96 TSEELRKCKELNRKLMNQPESPAFNTPVDPVALQVPTYFSVIKRPMDLGTIKHNLSDKKY 155
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
+EF D+ L F+NAL++N VY A L +FE +++ K+++
Sbjct: 156 ITKEEFQADMLLVFDNALLFNHPDSEVYHWAVKLKKQFETLWKNAFKEKK 205
>gi|291336160|gb|ADD95738.1| predicted protein [uncultured organism MedDCM-OCT-S04-C2]
Length = 218
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
M + +I++ + ++ F PVD +L L DY I+K PMDLGTV+ +E NVYK +
Sbjct: 12 MDQMLKIVSSTIARRESLIFREPVDWKALGLTDYIQIVKTPMDLGTVKKNIEKNVYKDIE 71
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMS 300
E A DVRL + N ++YN G Y +A+ S FE + L + + +
Sbjct: 72 ECANDVRLVWTNCMLYNRDGSEYYHLADKFSKAFEDAYGALRRLHVTD---DEDPHKTPT 128
Query: 301 LEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVR 360
+E ++ L + ++ E+ ++L I+++ +L DE+ ++ +AL ++T +++ +
Sbjct: 129 VEARIQLSHDIFKIDNVEMARVLTIIEE--DCPSALVRKVDEVMINFDALASETFNKVNK 186
Query: 361 FVDN 364
FV N
Sbjct: 187 FVLN 190
>gi|167391721|ref|XP_001739904.1| bromodomain-containing protein [Entamoeba dispar SAW760]
gi|165896243|gb|EDR23718.1| bromodomain-containing protein, putative [Entamoeba dispar SAW760]
Length = 264
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C ++ +LMK + F PVD + +Y +IIK PMDLGTV K++ N+Y +F+
Sbjct: 68 CMNVMKQLMKVSESEVFMEPVDPEIWNIPNYFEIIKTPMDLGTVIKKIKKNMYYSIDQFS 127
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF----QKLSKQQQRQGILGRGKARE- 298
DVRLTF NA+ +NP G+YV++ AE L FE + +KL+ + + L + K +
Sbjct: 128 NDVRLTFTNAMTFNPPGNYVHSYAEKLYKIFENYYRHCIRKLNYHLKEENNLLQSKKKYS 187
Query: 299 ---MSLEEKMALGRSLEELPQEELGKLLGIVK 327
++ E L + ++ +P E L + +++
Sbjct: 188 QKPLNRSEMHYLTQKMKNIPLECLNDVCEVLE 219
>gi|47201045|emb|CAF89147.1| unnamed protein product [Tetraodon nigroviridis]
Length = 378
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +L +L+ K W F PVD SL L DYHDIIK+PMDL T++ K++N Y
Sbjct: 250 LRYCNGVLKELLSKKHAGYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNREYL 309
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
Q+FA DVRL F+N YNP + E+ K
Sbjct: 310 DSQQFAADVRLMFSNCYKYNPPDTMWWPWPESCRTSLSSALLKC---------------- 353
Query: 298 EMSLEEKMALGRSLEELPQ 316
+MSL AL R LP
Sbjct: 354 QMSLLHPPALRRHRPHLPH 372
>gi|392885383|ref|NP_491384.3| Protein BET-1, isoform a [Caenorhabditis elegans]
gi|351060603|emb|CCD68309.1| Protein BET-1, isoform a [Caenorhabditis elegans]
Length = 853
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
+M+ C ++L K W FN PVD L L DYH IIK+PMDL ++++K+E+ Y
Sbjct: 262 SMKPCLKLLNDFSTKKYQEFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAY 321
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
K P +F DVRL N +YNP G V++ F++ + +L R
Sbjct: 322 KEPSDFEHDVRLMLRNCFLYNPVGDPVHSFGLRFQEVFDRRWAELGDSSSR 372
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K K W F PVD V+L + YH+ + +PMDL T+ ++L++ Y C QE +D+
Sbjct: 51 VLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDI 110
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI-LGRGKAR 297
F N +N K V MA+ + ++ ++ +++ + G+ K +
Sbjct: 111 ETVFQNCYTFNGKEDDVTIMAQNVHEVIKKSLEQAPREEHDMDVYWGKNKKK 162
>gi|412993064|emb|CCO16597.1| bromodomain containing 2 [Bathycoccus prasinos]
Length = 1076
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 14/129 (10%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN-NVYKCPQ 240
R+C + ++M G F PVD V+L L +YH II PMDLGT++ +E+ Y+ +
Sbjct: 505 RQCLAAVRQVMSHDWGGPFRMPVDAVALGLANYHTIITNPMDLGTIKKFIEDGGKYELAK 564
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMS 300
E EDV LTFNNA+ +N +G V+ MA+TL A + + +GI+ ARE
Sbjct: 565 EVHEDVELTFNNAMKFNAEGTDVHVMAKTLLALWHTKY---------EGIV----AREKE 611
Query: 301 LEEKMALGR 309
+EE + L R
Sbjct: 612 VEEGLLLDR 620
>gi|225691074|gb|ACO06221.1| bromodomain and WD repeat domain containing 1 isoform A (predicted)
[Dasypus novemcinctus]
Length = 2326
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
K+++ T + S N M++C E++T + + + F PVD+V DY DII PMD
Sbjct: 1306 KKSSKATNYIES--NWMKQCKELVTLIFQCEDSEPFRQPVDLVDYP--DYRDIIDTPMDF 1361
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1362 GTVRETLEAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1420
>gi|440800738|gb|ELR21773.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 904
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N + C +I+T L+ D W FN PVD V+L + Y DIIK+PMD GT+ KL+N Y+
Sbjct: 442 NILLECKKIMTSLISDTDAWPFNQPVDPVALGIPTYFDIIKEPMDFGTINQKLKNGKYEV 501
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+F DV L F NAL++N + A+ L FE+ ++
Sbjct: 502 LAQFERDVHLVFANALLFNEPDSDIGYWAKKLRGLFERRLVRV 544
>gi|323448819|gb|EGB04713.1| hypothetical protein AURANDRAFT_17164, partial [Aureococcus
anophagefferens]
Length = 88
Score = 88.6 bits (218), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 56/88 (63%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L KL+ + W F PVD V L L DY +IIK PMDLG+++ ++ENN YK EF DV
Sbjct: 1 VLKKLIDHECSWIFMQPVDPVELNLPDYFEIIKNPMDLGSIKKRMENNGYKLIAEFGADV 60
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
RLTF+NA+ YN G V +A + + F
Sbjct: 61 RLTFDNAISYNGNGSDVCKVARDMKSTF 88
>gi|300121324|emb|CBK21704.2| unnamed protein product [Blastocystis hominis]
Length = 304
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
M C + L KLM K F PVD V+L L DY D++K PMD T+ S++EN+ +
Sbjct: 1 MALCAKSLKKLMMHKWAGPFLHPVDPVALGLSDYFDVVKHPMDFSTILSQIENHELRSKD 60
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
EFA V L F+NAL+YN KG V+ MA L + F + + ++ Q
Sbjct: 61 EFASKVNLVFDNALLYNSKGSDVHIMASELQSLFAKEMETITGQ 104
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 14/111 (12%)
Query: 268 ETLSAKFEQMFQKLSKQQQ----RQGILGRGK----AREMSLEEKMALGRSLEELPQEEL 319
E + ++ +Q+ +LS+ Q RQG +G+ AR M++EEK AL + +L +L
Sbjct: 160 EMMKSRIQQLEGELSRMTQEVNERQG---KGEKALDARPMTMEEKKALSMEINQLKGSDL 216
Query: 320 GKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEK 370
+++ IV + +G ++IELD+ A+ N+TL +L R++ K+A+K
Sbjct: 217 EEVVRIVWGQMAGE---QMQQNDIELDLSAMPNETLRKLERYIVQCKEAKK 264
>gi|407042940|gb|EKE41627.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 315
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 67/110 (60%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
T +R+C E+ KLM + AFNTPVD V+L++ Y +IK+PMDLGT++ L + Y
Sbjct: 23 TSEELRKCKELNRKLMNQPESPAFNTPVDPVALQVPTYFSVIKRPMDLGTIKHNLSDKKY 82
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
+EF D+ L F+NAL++N VY A L +FE +++ K+++
Sbjct: 83 ITKEEFQADMLLVFDNALLFNHPDSEVYHWAVKLKKQFETLWKNAFKEKK 132
>gi|298708786|emb|CBJ30746.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 262
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 10/192 (5%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N +++ +I+ + AF PV+ ++ + DY I+K PMDLGTVR+KLE Y+
Sbjct: 7 NGLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRTKLEEGRYER 66
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKARE 298
++ A DVRL ++N ++YN G +A L+ KFE+ F ++ ++ + K+
Sbjct: 67 AEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSRVKTAEKERDRKPSAKSEP 126
Query: 299 M-----SLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDND 353
+ +L+EK+ L + ++G+++ V R S DE+EL+++ LD
Sbjct: 127 VNTKAPTLDEKVRFTYDLYRTTKVDVGQVMEQVDAR-CPQALKSPADDEVELNVDMLDPL 185
Query: 354 TLSQLVRFVDNF 365
T RFV+
Sbjct: 186 TF----RFVERL 193
>gi|183232851|ref|XP_651394.2| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|169801846|gb|EAL46008.2| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449707679|gb|EMD47300.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 315
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 67/110 (60%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
T +R+C E+ KLM + AFNTPVD V+L++ Y +IK+PMDLGT++ L + Y
Sbjct: 23 TSEELRKCKELNRKLMNQPESPAFNTPVDPVALQVPTYFSVIKRPMDLGTIKHNLSDKKY 82
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
+EF D+ L F+NAL++N VY A L +FE +++ K+++
Sbjct: 83 ITKEEFQADMLLVFDNALLFNHPDSEVYHWAVKLKKQFETLWKNAFKEKK 132
>gi|32564850|ref|NP_871879.1| Protein BET-1, isoform b [Caenorhabditis elegans]
gi|351060598|emb|CCD68304.1| Protein BET-1, isoform b [Caenorhabditis elegans]
Length = 765
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
+M+ C ++L K W FN PVD L L DYH IIK+PMDL ++++K+E+ Y
Sbjct: 262 SMKPCLKLLNDFSTKKYQEFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAY 321
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
K P +F DVRL N +YNP G V++ F++ + +L R
Sbjct: 322 KEPSDFEHDVRLMLRNCFLYNPVGDPVHSFGLRFQEVFDRRWAELGDSSSR 372
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K K W F PVD V+L + YH+ + +PMDL T+ ++L++ Y C QE +D+
Sbjct: 51 VLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDI 110
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI-LGRGKAR 297
F N +N K V MA+ + ++ ++ +++ + G+ K +
Sbjct: 111 ETVFQNCYTFNGKEDDVTIMAQNVHEVIKKSLEQAPREEHDMDVYWGKNKKK 162
>gi|66826485|ref|XP_646597.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
gi|74858341|sp|Q55C84.1|Y0170_DICDI RecName: Full=Bromodomain-containing protein DDB_G0270170
gi|60474498|gb|EAL72435.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
Length = 1578
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
+RC ++L +L + + F VD +L + DY D+IK PMDLGT+++ L Y
Sbjct: 740 VFKRCLDLLEELFEHQHSPPFLVAVDPYALGILDYFDVIKHPMDLGTIKASLIGGGYDTI 799
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FAED RL F+NA YNP + V+ MA++L FE+ F K+
Sbjct: 800 DKFAEDCRLVFSNAKTYNPSTNPVHIMAQSLEDVFEKGFPKV 841
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDT 354
K +++ EEK LG + +LP + L +L I+ N+ + G E+ +D+ D+D
Sbjct: 963 KYPKVTTEEKTKLGAEITQLPVDLLPSILQII--HNTNSLPEQKPGSEVVIDLMKFDDDI 1020
Query: 355 LSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAP 389
L +L +FV+ +K E Q A+ ++AP
Sbjct: 1021 LRRLSKFVEQYKNGE---------IPQHALPLSAP 1046
>gi|58865638|ref|NP_001012031.1| bromodomain testis-specific protein [Rattus norvegicus]
gi|50927337|gb|AAH78999.1| Brdt protein [Rattus norvegicus]
gi|165971045|gb|AAI58631.1| Brdt protein [Rattus norvegicus]
Length = 326
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 168 AAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTV 227
A T LT+ ++R +L L K W F PVD L+L DY+ II+ PMDL T+
Sbjct: 21 AKKTGRLTNQLQFLQRV--VLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTI 78
Query: 228 RSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
+ +LEN Y+ E D F+N +YN G + MA+ L F QKLS+ Q
Sbjct: 79 KKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLF---MQKLSQMPQE 135
Query: 288 QGILGRGKAREMSLEEKMALGRSLEELP 315
+ I+G + + +++K A+ + E+ P
Sbjct: 136 EQIVGGKERMKKDIQQKTAVSSAKEQTP 163
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVR 228
++ C EIL +++ K W F PVDV +L L +Y+DI+K PMDLGT++
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIK 322
>gi|297819940|ref|XP_002877853.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
gi|297323691|gb|EFH54112.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
Length = 371
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 50/232 (21%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NN 234
++ MR+ G I ++ + K W F PV+V L L DY ++I KPMD T+++++E
Sbjct: 94 QDLMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGT 153
Query: 235 VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL------------- 281
YK + D+RL F NA+ YN + VY+MA+ L KFE+ +
Sbjct: 154 GYKHVLQVYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIREE 213
Query: 282 -SKQQQRQGILGR------------------------------GKAREMSLEEKMALGRS 310
KQ + +L + + R++++EEK +G +
Sbjct: 214 EEKQAATEALLAKEASHIKTTRDLGNEICHANDELEKLMRKVVERCRKITIEEKRNIGLA 273
Query: 311 LEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
L +L ++L K+LGIV + + S +E+ ++++ LD TL +L FV
Sbjct: 274 LLKLSPDDLQKVLGIVAQ---ADPSFQPRAEEVSIEMDILDEPTLWRLKFFV 322
>gi|255732041|ref|XP_002550944.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131230|gb|EER30790.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 730
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDII 218
PK K+ AA +R C + + +LM K + F PVD V+L + +Y +I+
Sbjct: 368 PKNKKFAA----------ELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYREIV 417
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
K+PMDLGT+++KL NN Y+ +F +DVRL F N +NP+G V M L A F++ +
Sbjct: 418 KEPMDLGTIQTKLTNNEYENGDQFEKDVRLVFKNCYAFNPEGTDVNMMGHRLEAVFDKKW 477
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 52/104 (50%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + ++++ F PVD V L + Y++ I +PMDL T+ K+ Y+ + +D
Sbjct: 216 VIKVIKRNREAVPFLHPVDTVKLNIPFYYNYIPRPMDLSTIERKINLKAYEDVSQIIDDF 275
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI 290
L N +N + + MA + A+FE+ K+ ++ G+
Sbjct: 276 NLMVKNCKKFNGEAAGISKMASNIQAQFEKHMVKVPPKELPVGV 319
>gi|328863827|gb|EGG12926.1| hypothetical protein MELLADRAFT_46486 [Melampsora larici-populina
98AG31]
Length = 339
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 160 GNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMK---DKQGWAFNTPVDVVSLRLRDYHD 216
G K K + + +TK ++ C E+L ++ K +K W F PVD V L + +Y
Sbjct: 68 GKNKRKATSGQLMMIHNTKEELKFCKEVLREVNKKAYEKFVWPFYEPVDPVKLGVPEYLT 127
Query: 217 IIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
IIKKPMDL T++ KL+ YK FA D RL NN +NP G VY + L FEQ
Sbjct: 128 IIKKPMDLSTIKQKLDRGEYKAGAAFAADFRLMLNNCFTFNPVGTPVYNFGKQLECLFEQ 187
Query: 277 MFQ 279
+
Sbjct: 188 KWH 190
>gi|194885054|ref|XP_001976378.1| GG20046 [Drosophila erecta]
gi|190659565|gb|EDV56778.1| GG20046 [Drosophila erecta]
Length = 257
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%)
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
W F P+D L L DYH+I+++PMDL TVR +L Y +FA+DVRL F N +Y
Sbjct: 32 AWVFYEPLDAQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLTAADFAKDVRLIFYNTYLY 91
Query: 257 NPKGHYVYAMAETLSAKFEQMFQKL 281
GH Y MA+ L FE+M+ ++
Sbjct: 92 TNPGHLCYHMAKQLQIIFEEMYAQV 116
>gi|189198604|ref|XP_001935639.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982738|gb|EDU48226.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 851
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C +LT+LMK K + F TPVD V+L + Y IIKKPMD GT+ L+N VY+
Sbjct: 488 LKFCESVLTELMKPKYSAVTYPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 547
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
++F D +L F N +NP+G V M L FE ++++
Sbjct: 548 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEDLFESLWKE 590
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
K K AF PVD V+L + Y +I+K PMDL T+ SKL+ Y ++F D+ N
Sbjct: 297 KIKVSLAFKDPVDPVALGIPQYPEIVKHPMDLSTMESKLKEKKYTYVRDFMADLDQMITN 356
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
+ ++N K H V L A F + K+ +
Sbjct: 357 SELFNNKQHPVTQAGYNLRAYFLKGMGKMPR 387
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQL 358
+S +K + + L ++ + + I+ RN + + DE+ELD+E +++DTL +L
Sbjct: 704 LSFAQKQEISEGISTLGDLDMRRAVQII--RNGCPHLANVNDDEMELDMEDINDDTLREL 761
Query: 359 VRFVDNFK 366
+RF+ + +
Sbjct: 762 LRFIKSLR 769
>gi|348682241|gb|EGZ22057.1| hypothetical protein PHYSODRAFT_491564 [Phytophthora sojae]
Length = 1223
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 186 EILTKLMKD---KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEF 242
+IL KLM D + G FNTPVD V+L L Y I++ PMDLGT++ L Y ++F
Sbjct: 383 DILLKLMSDPRNRHG-VFNTPVDPVALELPTYTTIVQHPMDLGTIKRNLAAGEYLELEDF 441
Query: 243 AEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQ 288
DVRL F NA+++NP+ HY++ AE L +F + K+Q ++
Sbjct: 442 VSDVRLVFENAMLFNPESHYIHVDAEVLLKRFNDSVKAEEKRQAKR 487
>gi|300176029|emb|CBK23340.2| unnamed protein product [Blastocystis hominis]
Length = 192
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ +C IL + +++ F PV L DY II++PMDLGTV L N YK
Sbjct: 5 LDQCKVILNEFLQNPDSKPFLQPVLWKEWGLDDYPKIIRQPMDLGTVNMHLTNGDYKDVY 64
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMS 300
EFA D+RL + N YN + VY + + LS FE+ F K+ +Q RE S
Sbjct: 65 EFAYDMRLIWRNCCTYNQEISDVYKVGKKLSELFEERFSKIEEQIPE-------AEREPS 117
Query: 301 LEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVR 360
+E+K SL +LP EL K+L I+ +R + + D +++ ++A+D T S +
Sbjct: 118 IEQKRLFVDSLFKLPPNELAKVLQIINERCESALDKT-NPDLVDIIVDAIDIATFSVVNS 176
Query: 361 FV 362
+V
Sbjct: 177 YV 178
>gi|323449321|gb|EGB05210.1| hypothetical protein AURANDRAFT_38626 [Aureococcus anophagefferens]
Length = 873
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 203 PVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHY 262
PVD V L L DY DIIK PMDLG+++ ++ENN YK EF DVRLTF+NA+ YN G
Sbjct: 3 PVDPVELNLPDYFDIIKNPMDLGSIKKRMENNCYKSISEFGSDVRLTFDNAISYNGDGSD 62
Query: 263 VYAMAETLSAKFEQMFQKL 281
V +A + A FE+++ +
Sbjct: 63 VCKVAREMKAVFEKLYHAM 81
>gi|195397557|ref|XP_002057395.1| GJ16365 [Drosophila virilis]
gi|194147162|gb|EDW62881.1| GJ16365 [Drosophila virilis]
Length = 429
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K W F PVD L L DYH IIK+PMD+GT++ +LENN Y +E D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKEAIHDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+TL F Q + + K++
Sbjct: 106 NTMFTNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEE 144
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 179 NAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+A++ C EIL +L K W F PVD L L DYHDIIKKPMDLGTV+ K++N
Sbjct: 344 DALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE 403
Query: 236 YKCPQEFAEDVRLTFNNAL 254
YK EFA + + L
Sbjct: 404 YKSAPEFAARCSINIHQLL 422
>gi|452003453|gb|EMD95910.1| hypothetical protein COCHEDRAFT_1210171 [Cochliobolus
heterostrophus C5]
Length = 912
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C ++T+LMK K + F +PVD V+L + Y IIKKPMD GT+ L+N VY+
Sbjct: 545 LKFCESVITELMKPKYSTLTYPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 604
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
++F D +L F N +NP+G V M K E++F+ L K++
Sbjct: 605 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGH----KLEELFESLWKEK 648
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
K K AF PVD V+L + Y+D++K PMDL T+ +KL+ YK ++F D+ N
Sbjct: 355 KIKVSLAFKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKKYKYVRDFMADLDQMITN 414
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
+ ++N K H V L A F + K+ +
Sbjct: 415 SELFNNKQHPVTQAGYNLRAYFLKGMGKMPR 445
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQL 358
+S +K + S+ L E+ + + I+ RN S + DE+ELD++ +++DTL +L
Sbjct: 765 LSFAQKQEISESISTLGDAEMHRAVQII--RNGCPHLASVNDDEMELDMDEINDDTLREL 822
Query: 359 VRFVDNFK 366
++F+ + +
Sbjct: 823 LKFIKSLR 830
>gi|395146565|gb|AFN53717.1| putative bromodomain-containing protein [Linum usitatissimum]
Length = 216
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
++C +L L+ GW F+ PVD V L + DY II PMDLGT+ SKL Y ++
Sbjct: 7 QQCSALLKVLLGHPYGWIFSKPVDPVELNIPDYFTIITNPMDLGTINSKLSKKKYFGAED 66
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETL 270
FA DVRLTF NA++YNP + V+ A L
Sbjct: 67 FAADVRLTFANAMLYNPPSNSVHTTALEL 95
>gi|150866686|ref|XP_001386360.2| hypothetical protein PICST_73625 [Scheffersomyces stipitis CBS
6054]
gi|149387942|gb|ABN68331.2| transcription factor [Scheffersomyces stipitis CBS 6054]
Length = 636
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C + + +LM K + F PVD V+L + +Y ++K+PMDLGT++SKL NN Y+
Sbjct: 305 LRFCSQTVKELMSKKHNGYNFPFVAPVDPVALNIPNYFKVVKEPMDLGTIQSKLTNNQYE 364
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
EF D+RL F N ++NP+G V M L A F++
Sbjct: 365 NGDEFERDIRLVFKNCYIFNPEGSEVNMMGHRLEAVFDK 403
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD+V L + Y++ I +PMDL T+ +K+ N Y+ + ED L N +N +
Sbjct: 154 FLHPVDIVKLNIPFYYNYIPRPMDLSTIETKVHVNAYEDSNQIVEDFNLMVANCKKFNGE 213
Query: 260 GHYVYAMAETLSAKFEQ 276
+ MA+ + A FE+
Sbjct: 214 NAGISKMADNIQAHFEK 230
>gi|396081966|gb|AFN83580.1| putative bromodomain-containing transcription factor
[Encephalitozoon romaleae SJ-2008]
Length = 370
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 7/137 (5%)
Query: 167 AAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGT 226
A+AG+ ++ ++ C ++LT++ ++ F PVD V L + DY + IK PMDL T
Sbjct: 6 ASAGS---ILAEHQLKYCSQVLTRIKRNSNAPPFLEPVDPVKLGIPDYPEKIKNPMDLST 62
Query: 227 VRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF----QKLS 282
+R KL+ Y P+ F +D++L FNN YNP G V+ M + L + + M Q++S
Sbjct: 63 IRKKLDAKEYSGPEGFDDDMKLMFNNCYTYNPPGTIVHDMGKALESAYNDMMAGMPQEVS 122
Query: 283 KQQQRQGILGRGKAREM 299
K++++ I G+++++
Sbjct: 123 KKRKKSEIPVTGRSKQV 139
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 33/207 (15%)
Query: 184 CGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C E+L+ L+K K W F PVD + Y+ +IK+PMD+ T+++KL+ Y +
Sbjct: 157 CSEVLSDLVKPKHKSYNWPFLEPVD--GDLVPGYYSVIKEPMDIQTMKNKLDQRKYHSVE 214
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGI--LGR----- 293
EF D+ L N +N G VYA + + +K S + I L R
Sbjct: 215 EFGRDLELIVENCKKFNAPGTEVYACGQEFEKAVKAHMEKTSPVDIKNKISELKRKVMSY 274
Query: 294 ---------------GKA---REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGS 335
G+A R SL E++++G ++ + +E+ + IV K +G
Sbjct: 275 TREIRMLESKLVEQTGEAPSSRAYSLSERVSIGNAILNMTKEQTENVAKIVLKNGAGE-- 332
Query: 336 LSCHGDEIELDIEALDNDTLSQLVRFV 362
DEIE+D+ + + + ++ ++
Sbjct: 333 -FVENDEIEVDMRTIPDHVVEEIDMYI 358
>gi|451856062|gb|EMD69353.1| hypothetical protein COCSADRAFT_166346 [Cochliobolus sativus
ND90Pr]
Length = 912
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C ++T+LMK K + F +PVD V+L + Y IIKKPMD GT+ L+N VY+
Sbjct: 545 LKFCESVITELMKPKYSTLTYPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 604
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
++F D +L F N +NP+G V M K E++F+ L K++
Sbjct: 605 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGH----KLEELFESLWKEK 648
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
K K AF PVD V+L + Y+D++K PMDL T+ +KL+ YK ++F D+ N
Sbjct: 355 KIKVSLAFKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKKYKYVRDFMADLDQMITN 414
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
+ ++N K H V L A F + K+ +
Sbjct: 415 SELFNNKQHPVTQAGYNLRAYFLKGMGKMPR 445
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQL 358
+S +K + S+ L E+ + + I+ RN S + DE+ELD++ +++DTL +L
Sbjct: 765 LSFAQKQEISESISTLGDAEMHRAVQII--RNGCPHLASVNDDEMELDMDEINDDTLREL 822
Query: 359 VRFVDNFK 366
++F+ + +
Sbjct: 823 LKFIKSLR 830
>gi|146181135|ref|XP_001022211.2| Bromodomain containing protein [Tetrahymena thermophila]
gi|146144265|gb|EAS01966.2| Bromodomain containing protein [Tetrahymena thermophila SB210]
Length = 840
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 60/103 (58%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+R C IL +L K + F VD ++ + DY+ II+ PMDL V S L+ Y+
Sbjct: 93 IRVCFSILQQLKKSENAGPFLQKVDALAQQCPDYYKIIRDPMDLSKVESNLKQGYYQTTL 152
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
+FA+DVR +NN+ YN KG +Y M E +S FE++F + +K
Sbjct: 153 QFADDVRKIWNNSFTYNQKGSQIYKMTEEMSRLFEKIFTQFTK 195
>gi|1916930|gb|AAB53050.1| CREB-binding protein homolog [Drosophila melanogaster]
Length = 3190
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 21/190 (11%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD +L + DY +I+KKPMDLGT+R+ ++N Y P E+ +DV L F+NA +YNPK
Sbjct: 1723 FRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNPK 1782
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM--ALGRSLEELP-- 315
VY LS FE + + LG R+ + ++ G+ L +P
Sbjct: 1783 TSRVYRYCTKLSEVFEAEIDPVMQ------ALGYCCGRKYTFNPQVLCCYGKQLCTIPRD 1836
Query: 316 ------QEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL-SQLVRFVDNFKKA 368
Q L K G+ R + C D I+ D L +D L SQ D FK+
Sbjct: 1837 AKYYSYQNSL-KEYGVASNRYT--YCQKCFND-IQGDTVTLGDDPLQSQTQIKKDQFKEM 1892
Query: 369 EKDKTEKEPM 378
+ D E EP
Sbjct: 1893 KNDHLELEPF 1902
>gi|358338689|dbj|GAA31548.2| E1A/CREB-binding protein [Clonorchis sinensis]
Length = 2085
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+R ++L ++ DK F PVD V L + DY ++IK+PMDL T+R+ LE+ YK P
Sbjct: 689 LRSFLQLLEEVYNDKFAEPFRAPVDPVMLHIPDYFEVIKEPMDLTTIRNNLEDGNYKDPW 748
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAM----AETLSAKFEQMFQKL 281
E E RL FNNA +YN K VY M AE ++ +Q+ Q L
Sbjct: 749 EVVEHFRLMFNNAWLYNKKNSKVYKMCTKLAELFQSRIDQVMQGL 793
>gi|325296799|ref|NP_001191640.1| CREB-binding protein [Aplysia californica]
gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia californica]
Length = 2245
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 188 LTKLMK-DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
L KL K D + F PVD V L + DY DI+KKPMDL T+R KL++ +Y P E+ +DV
Sbjct: 995 LEKLFKQDPESLPFRQPVDPVVLHIPDYFDIVKKPMDLSTIRRKLDSGLYSDPWEYVDDV 1054
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFE 275
L F+NA +YN K VY A LS FE
Sbjct: 1055 CLMFDNAWLYNRKTSRVYKYASKLSEVFE 1083
>gi|291414070|ref|XP_002723287.1| PREDICTED: bromodomain and WD repeat domain containing 1 isoform B
(predicted)-like [Oryctolagus cuniculus]
Length = 2215
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR++ T + S N R+C E++ + + + F PVD+V DY DII PMD
Sbjct: 1249 KRSSKATNCVES--NWKRQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 1304
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1305 GTVRETLEAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1363
>gi|217030820|gb|ACJ73989.1| bromodomain and WD repeat domain containing 1 isoform B (predicted)
[Oryctolagus cuniculus]
Length = 2207
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR++ T + S N R+C E++ + + + F PVD+V DY DII PMD
Sbjct: 1241 KRSSKATNCVES--NWKRQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 1296
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1297 GTVRETLEAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1355
>gi|149017671|gb|EDL76672.1| bromodomain and WD repeat domain containing 1 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 1139
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR + G+ + S + R+C +L + + + F PVD+V DY DII PMD
Sbjct: 185 KRRSRGSSCIES--DWRRQCKALLILIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 240
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 241 GTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 299
>gi|356532581|ref|XP_003534850.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 578
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 119/271 (43%), Gaps = 63/271 (23%)
Query: 137 QATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ 196
Q H T +S+ G SK AN S + K M + I ++ + +
Sbjct: 291 QEKHVIGTKRSRQGGSSKEAN---------------SSNTMKEVMHQFSTIFHQITQHRW 335
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL---ENNVYKCPQEFAEDVRLTFNNA 253
W F PVDV L L DY+ II+KPMD GT++ K+ + + YK ++ DV L F NA
Sbjct: 336 AWPFMDPVDVEGLGLSDYYQIIEKPMDFGTIKRKMDAKDGSGYKNVRQIYSDVTLVFKNA 395
Query: 254 LVYNPKGHYVYAMAETLSAKFEQMFQKL--------SKQQQRQGILGR------------ 293
+ YN + ++ MA+TL KFE+ + +L S++++ + +L
Sbjct: 396 MKYNDEKTDIHIMAKTLREKFEKKWLQLLPKVAQAESEKEEARALLKAKLAEEAAYANMT 455
Query: 294 ----------------------GKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNS 331
K R++S EK+AL ++L L + L K + I+ +
Sbjct: 456 KDIRHALCDVDEQLKNLKEMVIKKCRKLSTHEKLALKKNLNRLNGDNLLKAMAII---HE 512
Query: 332 GNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
+ + +++LD++ + L +L FV
Sbjct: 513 IDPTFQHDAPQVDLDLDCQSDFILWKLNMFV 543
>gi|149017670|gb|EDL76671.1| bromodomain and WD repeat domain containing 1 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 1182
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR + G+ + S + R+C +L + + + F PVD+V DY DII PMD
Sbjct: 185 KRRSRGSSCIES--DWRRQCKALLILIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 240
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 241 GTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 299
>gi|195489088|ref|XP_002092589.1| GE11582 [Drosophila yakuba]
gi|194178690|gb|EDW92301.1| GE11582 [Drosophila yakuba]
Length = 257
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 184 CGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C I+ +L + W F P+D L L DYH+I+++PMDL TVR +L Y
Sbjct: 16 CKVIIKRLFSNTYKNIAWVFYEPLDAQLLGLHDYHEIVREPMDLSTVRHRLNTACYLTAA 75
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA+D+RL F N +Y GH Y MA+ L FE+M+ ++
Sbjct: 76 DFAKDMRLIFYNTYLYTNPGHLCYHMAKQLQIIFEEMYAQV 116
>gi|19171209|emb|CAD13175.1| viroid RNA-binding protein [Solanum lycopersicum]
Length = 313
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 88/152 (57%), Gaps = 26/152 (17%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
REM++EEK LG L+ LPQE++ +L+ I++KRN L+ GDEIELDIEALD +TL
Sbjct: 118 REMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNE---HLAQDGDEIELDIEALDTETLW 174
Query: 357 QLVRFVDNFKKAEKDKTEKEPMCSQVA--------------VAVA-APVVIER------S 395
+L RFV N+KK KT+++ + + + VA A P E+ +
Sbjct: 175 ELDRFVTNWKKM-VSKTKRQALMNNLGPPSASAAASAATTSVAEADGPTTSEKNDSFKKA 233
Query: 396 KKGDVAAEEEVDIGEEIPVQNYPPVVIERDDA 427
KKGDV E+ ++ P ++PPV IE+D+
Sbjct: 234 KKGDVGEEDVEIE-DDEPATHFPPVEIEKDEG 264
>gi|326936108|ref|XP_003214100.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Meleagris gallopavo]
Length = 601
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 66 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 125
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q ++ ++Q
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQ 165
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
+++ M+ +EK L + +LP E+LG+++ I++ R SL + +EIE+D E L
Sbjct: 481 ESKPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREP---SLRDSNPEEIEIDFETLKPS 537
Query: 354 TLSQLVRFV 362
TL +L R+V
Sbjct: 538 TLRELERYV 546
>gi|68131533|dbj|BAE02656.1| CREB binding protein [Lymnaea stagnalis]
Length = 2275
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 188 LTKLMK-DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
L KL+K D + F PVD V L + DY +I+KKPMDL T+R KL++ +YK P E+ +DV
Sbjct: 989 LEKLVKQDPESLPFRQPVDPVILHIPDYFEIVKKPMDLSTIRRKLDSGLYKDPWEYVDDV 1048
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFE 275
L F+NA +YN K VY A L+ FE
Sbjct: 1049 WLMFDNAWLYNRKTSRVYKYASKLAEVFE 1077
>gi|330812863|ref|XP_003291336.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
gi|325078478|gb|EGC32127.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
Length = 564
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C IL+++ K K +AF PVD + DY DIIK PMD+ T+ SKL+N Y ++FA
Sbjct: 330 CKTILSQIFKKKISYAFQRPVDPELENIPDYFDIIKNPMDISTIDSKLDNEKYGTIKDFA 389
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
DVRL F NAL YN + VY A+ L F+ F K
Sbjct: 390 ADVRLMFENALTYNAEISPVYKYAKQLLTYFDNSFIK 426
>gi|255083170|ref|XP_002504571.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226519839|gb|ACO65829.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 198
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 178 KNAMRRCGEILTKLM-KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
K ++C I+ KL + KQ WAFN PVD V+L + DY DIIK PMDL T+ L +
Sbjct: 92 KQWQKQCLAIIKKLRSQRKQAWAFNEPVDPVALNIPDYPDIIKHPMDLATLEGLLVSGAI 151
Query: 237 KCPQEFAEDVRLTFNNALVYN--PKGHYVYAMAETLSAKFEQMFQKL 281
+ P +F ++R F N+ VYN G VY AE LS FE+ K+
Sbjct: 152 ETPDQFVAEMRTIFRNSYVYNRPGSGDLVYESAEKLSLSFEKELLKM 198
>gi|149017672|gb|EDL76673.1| bromodomain and WD repeat domain containing 1 (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 886
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR + G+ + S + R+C +L + + + F PVD+V DY DII PMD
Sbjct: 171 KRRSRGSSCIES--DWRRQCKALLILIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 226
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 227 GTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 285
>gi|312373442|gb|EFR21185.1| hypothetical protein AND_17423 [Anopheles darlingi]
Length = 401
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + K + W F PVD L L DYH IIK+PMDLGT++ +LENN Y +E +D
Sbjct: 76 VMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWSAKECIKDF 135
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
F N VYN G V MA+TL F
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLEKLF 163
>gi|224007327|ref|XP_002292623.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
gi|220971485|gb|EED89819.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
Length = 865
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
R+C ++ KL + GW F PVD V L + DY DI++ PMDL V +KLEN VYK
Sbjct: 52 RKCLPLVRKLYNHEHGWVFKDPVDPVELGIPDYFDIVQHPMDLALVETKLENGVYKDLDS 111
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
F D +L F NA+++N + + V MA+ L F++ + + K
Sbjct: 112 FERDTKLVFENAILFNGEKNDVGGMAKQLLFMFDEDLKAVMK 153
>gi|300701921|ref|XP_002995060.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
gi|239603745|gb|EEQ81389.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
Length = 368
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ M+ CG+IL KL +++ + F PVD + + DY IK PMDL TV+ KL++ VY
Sbjct: 10 EHQMKYCGQILQKLKRNQNAFPFLEPVDPIKYGIPDYPLKIKYPMDLSTVKKKLDSKVYN 69
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
P+ F D++L FNN YN VY + + L ++++F L + I + K
Sbjct: 70 TPEMFDSDIKLMFNNCYTYNHPSSDVYLLGKKLEEYYDELFALLPME-----ISKKRKRP 124
Query: 298 EMSLEEKMALGRSL 311
EMSLE + R++
Sbjct: 125 EMSLERSKQVKRTI 138
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 34/212 (16%)
Query: 184 CGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C E+L +++K K W F PVD L Y++IIK PMDL +++ KL+ YK
Sbjct: 152 CIEVLNEILKSKYKGFVWPFLEPVD--ENLLPQYYEIIKNPMDLKSIKDKLDLKSYKGVD 209
Query: 241 EFAEDVRLTFNNALVYNPKGHYVY-------AMAETLSAKFEQMFQKLSKQQQRQGILGR 293
EF+ D+RL N +N +G VY + +L A +E K + ++ I+
Sbjct: 210 EFSNDLRLITENCHKFNDQGSDVYRCGTELNELVNSLLANYEPKDLKGRILELKKKIVQY 269
Query: 294 GK-------------------AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNG 334
K + SL E++ LG + L + + + I++K ++G
Sbjct: 270 TKEVKALESKLRDKNDGSPVTVKNYSLNERIELGNRILNLNKIQTDTVAKIIQKYSAGE- 328
Query: 335 SLSCHGDEIELDIEALDNDTLSQLVRFVDNFK 366
+EIE+D+ L ++ ++ ++ N +
Sbjct: 329 --YVENNEIEVDLRILPDNVYEEIDMYISNIE 358
>gi|449541548|gb|EMD32531.1| hypothetical protein CERSUDRAFT_118583 [Ceriporiopsis subvermispora
B]
Length = 1819
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 166 RAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLG 225
+A +G SL N +R C L KL +K F PVD V R +Y DIIKKPMDL
Sbjct: 1221 KAQSGGMSL----NDLRACRNALKKLQTNKHAPVFLQPVDPVRDRAPNYFDIIKKPMDLS 1276
Query: 226 TVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
T+ +KLE+ YK EF D+ L NNA YN G +V+ A L + FE+ + ++SK
Sbjct: 1277 TISAKLESGQYKDRFEFRSDLHLMINNAKTYNMAGSFVHEQALALESFFEKQWVRISK 1334
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
++C +IL L + + F PVD V Y+D IK+PMD T+ +K Y ++
Sbjct: 1584 KKCRDILKTLTRVLEAAIFLRPVDPVLDGCPTYYDEIKEPMDFATMGNKFTEGAYTTMED 1643
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ-----KLSKQQQR--QGILGR 293
FA+DV L F N +NP G Y A+T+ +++ +Q KL+ Q++R QG++ +
Sbjct: 1644 FAKDVELVFANCRTFNPPGTYPVQCADTVERVWKREWQKAMEKKLTFQEKRSLQGLMTK 1702
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDII--KKPMDLGTVRSKLENNVYKCPQEFAE 244
++TKL+ D W F PVD V L + Y D+I K DL T+R+KL+ + Y+ + F
Sbjct: 1699 LMTKLVVDPVSWVFREPVDPVLLGIPTYFDVIPKKDARDLRTIRNKLDADKYESIEAFEA 1758
Query: 245 DVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL-SKQQQRQG 289
D+ L NNA+ +N V A + K+ M L S +R+G
Sbjct: 1759 DMDLMINNAIRFNGADSEVGQAAVVMRHKYRDMLSSLKSSTTKRKG 1804
>gi|156030778|ref|XP_001584715.1| hypothetical protein SS1G_14328 [Sclerotinia sclerotiorum 1980]
gi|154700719|gb|EDO00458.1| hypothetical protein SS1G_14328 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 931
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C E L ++ K K AF TPVD V+L++ +Y IIK PMD+ TV KL+N Y
Sbjct: 548 LKWCEETLNEMKKSKYLMFSSAFMTPVDPVALQIPNYFTIIKSPMDISTVSEKLQNGAYT 607
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
+EF +DV+L F N +NP+G+ V M + +FE++F L ++ R
Sbjct: 608 RAKEFEQDVKLIFQNCYKFNPEGNPVRVMGQ----QFEEVFNGLLAKKDR 653
>gi|145347283|ref|XP_001418103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578331|gb|ABO96396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 859
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
K +RRC E+L K K F PVD + DY DIIK PMD+GTV++KL+ Y
Sbjct: 269 KEMIRRCREVLIASKKHKYHKIFLVPVDPKKHGVPDYFDIIKNPMDMGTVKTKLDTKAYL 328
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
P EF D+RL F+N L+YN M ET+ FE +
Sbjct: 329 NPAEFCADMRLIFSNGLLYNGTASDAGVMTETVRQLFETAW 369
>gi|15231174|ref|NP_190796.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|75172388|sp|Q9FT54.1|GTE6_ARATH RecName: Full=Transcription factor GTE6; AltName:
Full=Bromodomain-containing protein GTE6; AltName:
Full=Protein GENERAL TRANSCRIPTION FACTOR GROUP E6;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E6
gi|10045561|emb|CAC07919.1| putative protein [Arabidopsis thaliana]
gi|332645404|gb|AEE78925.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 369
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 50/234 (21%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NN 234
++ MR+ G I ++ + K W F PV+V L L DY ++I KPMD T+++++E
Sbjct: 92 QDLMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGT 151
Query: 235 VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ-------- 286
YK + D+RL F NA+ YN + VY+MA+ L KFE+ + + Q
Sbjct: 152 GYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIREE 211
Query: 287 ------RQGILGRGKA-----REM-------------------------SLEEKMALGRS 310
++ +L + + RE+ ++EEK +G +
Sbjct: 212 EEKQAAKEALLAKEASHIKTTRELGNEICHANDELEKLMRKVVERCRKITIEEKRNIGLA 271
Query: 311 LEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDN 364
L +L ++L K+LGIV + N S +E+ ++++ LD TL +L FV +
Sbjct: 272 LLKLSPDDLQKVLGIVAQ---ANPSFQPRAEEVSIEMDILDEPTLWRLKFFVKD 322
>gi|340501220|gb|EGR28026.1| hypothetical protein IMG5_184560 [Ichthyophthirius multifiliis]
Length = 288
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
M++C IL +L K++ F VD + +Y+ II +PMDL + L+ N Y+
Sbjct: 50 MKQCMVILQRLKKNENAIPFLYRVDTIQQNCPNYYQIITEPMDLSQIELNLKLNQYQTKS 109
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL---------------SKQQ 285
+FA DV+ + N+ +YNPKG +Y M +SA FE++F ++ +K
Sbjct: 110 QFAADVKKIWRNSFIYNPKGSQIYYMTVKMSAFFEKLFSQIENISPRRINQYQNNYNKIS 169
Query: 286 QRQGILGR---GKARE----------MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSG 332
Q +L + G A+ +++ EK LG ++ L E+L + IV+ N
Sbjct: 170 QNINLLTKQVNGLAKTETKIDKMNIPLTMNEKKQLGTNIRNLAPEDLNGIWSIVQDDNQH 229
Query: 333 NGSLSCHGDEIELDIEAL 350
N + IE DI+ L
Sbjct: 230 NSEV------IEFDIDTL 241
>gi|320582812|gb|EFW97029.1| hypothetical protein HPODL_1739 [Ogataea parapolymorpha DL-1]
Length = 894
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMK---DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +++ +LM D + F PVD V+L Y D++K+PMDLGT+ SKL+N Y+
Sbjct: 579 LRFCQQVIKELMSKKYDSISYPFLAPVDPVALDCPTYFDVVKEPMDLGTIHSKLQNGEYE 638
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
EF +DVRL F+N ++NP+G V M L + F + +
Sbjct: 639 NADEFEKDVRLVFHNCYLFNPEGTAVNIMGHRLESVFNEKW 679
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 11/104 (10%)
Query: 173 SLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE 232
++TS K A+RR K F TPVD V L + Y++ IK+PMDL T+ KL
Sbjct: 414 AITSIK-AVRRL----------KDAGPFLTPVDTVKLNIPFYYNFIKRPMDLSTIERKLN 462
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
+ Y+ P++ ED L +N + +N K + MA + A FE+
Sbjct: 463 VDAYETPEQVMEDFNLMVDNCITFNGKDSAISQMARNIQASFEK 506
>gi|403182415|gb|EJY57367.1| AAEL017391-PA [Aedes aegypti]
Length = 2828
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 188 LTKLM-KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
L KL+ ++ + F PVD +L + DY DI++KPMDL T+R KL++ Y P E+ +DV
Sbjct: 1374 LEKLVAQEPESIPFRLPVDPTTLGIPDYFDIVRKPMDLSTIRKKLDSGQYSDPWEYVDDV 1433
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM- 305
L F+NA +YN K VY LS FEQ + + LG R+ + ++
Sbjct: 1434 WLMFDNAWLYNRKTSRVYRYCTKLSEVFEQEIDPVMQS------LGYCCGRKYTFNPQVL 1487
Query: 306 -ALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRF-VD 363
G+ L +P++ +N C D I D+ L +D L + D
Sbjct: 1488 CCYGKQLCTIPRDA-----KYYSYQNRYTYCQKCFND-IPGDMVTLGDDPLQTQTQIKKD 1541
Query: 364 NFKKAEKDKTEKEP--MC 379
FK+ + D E EP MC
Sbjct: 1542 QFKEMKNDHLELEPFVMC 1559
>gi|301109737|ref|XP_002903949.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
gi|262096952|gb|EEY55004.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
Length = 1186
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
Query: 186 EILTKLMKD---KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEF 242
+IL KLM D + G FNTPVD ++L L Y I++ PMDLGTV+ L Y ++F
Sbjct: 379 DILLKLMADPRNRHG-VFNTPVDPIALELPAYTTIVQHPMDLGTVKRNLAAGEYLELEDF 437
Query: 243 AEDVRLTFNNALVYNPKGHYVYAMAETLSAKF-EQMFQKLSKQQQRQGI 290
DVRL F NA+V+NP+ HY++ A L +F E + + ++Q +RQ +
Sbjct: 438 VSDVRLVFENAMVFNPESHYIHVDAGILLNRFNEAVKAEQNRQAKRQRV 486
>gi|349605116|gb|AEQ00459.1| Bromodomain and WD repeat-containing protein 1-like protein,
partial [Equus caballus]
Length = 615
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N ++C E++ + + + F PVD+V DY DII PMD GTVR LE Y
Sbjct: 41 NWKKQCKELVNLIFQCEDSEPFRQPVDLV--EYPDYRDIIDTPMDFGTVRETLEAGNYDS 98
Query: 239 PQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 99 PLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 143
>gi|348556331|ref|XP_003463976.1| PREDICTED: bromodomain and WD repeat-containing protein 1-like,
partial [Cavia porcellus]
Length = 2328
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 152 GSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRL 211
G +RA+ + K+ RAA+ S R+C E++ + + + F PVD+V
Sbjct: 1295 GRRRAHGW-KKKSSRAASYLES-----KWKRQCKELVNLIFQCEDSEPFRQPVDLVEYP- 1347
Query: 212 RDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETL 270
DY DII PMD GTVR LE Y P EF +D+RL F+NA Y P K +Y+M L
Sbjct: 1348 -DYRDIIDTPMDFGTVRETLEAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRL 1406
Query: 271 SAKFEQMFQKLS 282
SA FE+ +K+S
Sbjct: 1407 SALFEEKMKKIS 1418
>gi|224057894|ref|XP_002299377.1| global transcription factor group [Populus trichocarpa]
gi|222846635|gb|EEE84182.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 50/225 (22%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---NNVYKCPQEFA 243
I ++ + K W F PVDV L L DY+++I+KPMD T+++++E YK +E
Sbjct: 1 IAHQIAQHKWAWPFLEPVDVEGLCLHDYYEVIEKPMDFRTIKNRMEAKDGTGYKNVREIY 60
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ--------------------------- 276
DVRL F NA+ YN + V+ MA TL KFE+
Sbjct: 61 ADVRLVFKNAMKYNDERDDVHVMARTLLEKFEEKWLQLLPKVAEEEKRREKEQTATQVAT 120
Query: 277 ----------MFQKLSK-------QQQRQGILGRGKAREMSLEEKMALGRSLEELPQEEL 319
M Q LS Q +R + +R++S EEK LG +L +L ++L
Sbjct: 121 KLAEESSYANMAQDLSNELHGVDMQLERIREMVVRNSRKISTEEKKKLGTALTQLSHQDL 180
Query: 320 GKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDN 364
+ L IV + N S E+ LD++ + TL +L FV +
Sbjct: 181 IRALEIVAEHNP---SFQATAQEVNLDMDTQSDVTLWRLKVFVQD 222
>gi|195124137|ref|XP_002006550.1| GI21118 [Drosophila mojavensis]
gi|193911618|gb|EDW10485.1| GI21118 [Drosophila mojavensis]
Length = 235
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%)
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
W F P+D L L DY+ I+K PMDL TV+ +L +N Y +FA DVR F NA +Y
Sbjct: 10 AWIFYEPIDAKLLGLIDYYKIVKHPMDLSTVKYRLNSNFYASSADFASDVRRIFYNAYLY 69
Query: 257 NPKGHYVYAMAETLSAKFEQMFQKLSK 283
GH Y MA+ L FE M+ K+ K
Sbjct: 70 TSPGHLCYDMAKKLQIIFENMYSKVPK 96
>gi|396464495|ref|XP_003836858.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
gi|312213411|emb|CBX93493.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
Length = 907
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C ++T+LMK K + F +PVD V+L + Y IIKKPMD GT+ L+N +Y+
Sbjct: 546 LRFCESVMTELMKPKYSAITFPFTSPVDPVALNIPSYLKIIKKPMDFGTIERNLKNGLYQ 605
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ 279
++F D +L F N +NP+G V M L FE +++
Sbjct: 606 SAKDFYADAQLVFQNCYKFNPEGDAVNKMGHQLEDLFESLWK 647
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
K K AF PV+ V L + Y +I+K PMDL T+ KL++ Y +EF D+ N
Sbjct: 355 KIKVSLAFKDPVNPVLLGIPTYPEIVKHPMDLSTMEHKLKDKKYNNVREFMADLDQMIEN 414
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMS 300
+ ++N K H V L A F + K+ + + + +GK+++ S
Sbjct: 415 SELFNNKHHPVTQAGYNLRAYFLKGMGKMPRGSAAEEPVPKGKSKKPS 462
>gi|429962983|gb|ELA42527.1| hypothetical protein VICG_00279 [Vittaforma corneae ATCC 50505]
Length = 379
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
T+ ++ C ILT+L ++ F PVD ++L + DY + IK PMD+ TV+ KL+ Y
Sbjct: 30 TEAQLKYCSMILTRLKRNANAGPFLKPVDPIALGIPDYPEKIKHPMDISTVKHKLDTKTY 89
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K P EF D+ L FNN YN VY M + L FE ++ L
Sbjct: 90 KIPDEFHSDMTLMFNNCYTYNQPDSVVYNMGKDLQKAFESLYADL 134
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 30/273 (10%)
Query: 124 VRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRR 183
V N+G + + F++ +A T+ + R ++ P K KR A +++ +A
Sbjct: 116 VYNMGKDLQKA-FESLYADLPTEIKKRK-TESVPPLSPVKPKRQARSPEAMSPEDHAF-- 171
Query: 184 CGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C E+L L K K W F PV Y II +P DL T+R+K + Y
Sbjct: 172 CAEVLLDLEKAKHKKYSWPFLYPV--TEQDAPGYFSIITQPTDLSTIRNKFDMRRYSSAS 229
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK-------LSKQQQRQGILGR 293
EF D+ L +N +N VY E + + + K +++ +++ IL +
Sbjct: 230 EFVTDLNLMISNCFKFNKPDSEVYKCGEEFNKVIQSLIHKGKDVDSRIAEIRRKISILNQ 289
Query: 294 ----------GKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEI 343
K R +L ++ +G+++ + +++ K+ IV K ++ + DEI
Sbjct: 290 ELRMLEQQQTNKTR-YTLSDREKIGKAIIHMTKKQTEKVSEIVHKHSAYD---YVDNDEI 345
Query: 344 ELDIEALDNDTLSQLVRFVDNFKKAEKDKTEKE 376
E+++E + + + ++ +V + E T E
Sbjct: 346 EINLETMPDFVVGEIYEYVQKVQNGEDASTASE 378
>gi|145537065|ref|XP_001454249.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422004|emb|CAK86852.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 20/195 (10%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
K +++ +IL +L+ + F PVD +L L DY +IKKPMDLGT KL+N+ YK
Sbjct: 11 KEELKKLNQILQQLIDSNESLEFRQPVDYKTLGLHDYLSVIKKPMDLGTCEKKLQNSEYK 70
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ------RQGIL 291
C +E +D++L ++N +YN ++ ++E K E+ F+K K + I
Sbjct: 71 CVEECLDDIQLIWDNCKLYNGPSSWISKLSE----KLEKSFKKYVKNYLPLVNVPQSSIK 126
Query: 292 GRGKARE---------MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDE 342
R A E +S EK+ L++L +++G L+ I+ + +S + + +
Sbjct: 127 IRKIADEAVQEDTQLTISHSEKVEFSNILKQLNPDQIGALVQII-QTSSPSAFVVVSKER 185
Query: 343 IELDIEALDNDTLSQ 357
++ I+ +D DT ++
Sbjct: 186 FQIIIDNIDFDTFTK 200
>gi|340505568|gb|EGR31885.1| hypothetical protein IMG5_100340 [Ichthyophthirius multifiliis]
Length = 475
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
IL + K K + F PVDVV ++ DY+DI+K+PMDLGT+++KL NVY+ +EF EDV
Sbjct: 385 ILQIISKAKGCYLFQQPVDVVKYQIHDYYDIVKRPMDLGTIKNKLNCNVYESCKEFIEDV 444
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFE 275
L F N ++YN V + L+ E
Sbjct: 445 ELVFYNCILYNGSDSEVGKFVQILNKNLE 473
>gi|392351939|ref|XP_003751070.1| PREDICTED: bromodomain and WD repeat-containing protein 1 [Rattus
norvegicus]
Length = 2260
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR + G+ + S + R+C +L + + + F PVD+V DY DII PMD
Sbjct: 1306 KRRSRGSSCIES--DWRRQCKALLILIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 1361
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1362 GTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1420
>gi|392332283|ref|XP_003752531.1| PREDICTED: bromodomain and WD repeat-containing protein 1 [Rattus
norvegicus]
Length = 2395
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR + G+ + S + R+C +L + + + F PVD+V DY DII PMD
Sbjct: 1398 KRRSRGSSCIES--DWRRQCKALLILIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 1453
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1454 GTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1512
>gi|301608560|ref|XP_002933843.1| PREDICTED: bromodomain-containing protein 3 [Xenopus (Silurana)
tropicalis]
Length = 1013
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++M K W F V+ L D D IK PMDL T+R K+EN +YK
Sbjct: 294 LKHCNNILNEMMSKKHAEYAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYK 351
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA DVRL F N+ YNP + V MA + FE MF K+
Sbjct: 352 DTQDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKI 395
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F PVD L L DY+ IIK PMDL T+R +LE N Y + +D
Sbjct: 40 VLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG-RG 294
F N +YN G + M++ L F + ++ ++ ++G RG
Sbjct: 100 NTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEMPHEEIELSVVGNRG 148
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
+ MS +EK L + +LP E+LG+++ I++ R + +EIE+D E L TL
Sbjct: 524 VKPMSYDEKRQLSLDINKLPGEKLGRIVHIIQSREPSLK--DSNPNEIEIDFETLKQSTL 581
Query: 356 SQLVRFV 362
L ++V
Sbjct: 582 RHLEKYV 588
>gi|63054449|ref|NP_588301.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe
972h-]
gi|46397302|sp|Q9Y7N0.1|BDF1_SCHPO RecName: Full=SWR1 complex bromodomain subunit bdf1
gi|157310522|emb|CAB41059.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe]
Length = 578
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
MR C +L +L K + + F PVD V+ DY D+IK+PMDL T++SKL N Y
Sbjct: 257 MRFCSTVLKELYKRQYESFAFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYS 316
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ 279
+EF D+ L FNN YNP G V+ M L F++ ++
Sbjct: 317 TLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEKWE 358
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
+ C I+ +L + K F PVD + + DY I+K PMDLGT+ KL + Y PQE
Sbjct: 91 KYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQE 150
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F +D+ L F+N +YN V +M + L FE+ ++L +Q
Sbjct: 151 FIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLKQLPDAEQ 195
>gi|255567701|ref|XP_002524829.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223535889|gb|EEF37549.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 515
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 56/86 (65%)
Query: 203 PVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHY 262
PVD L++ DY II PMDLGTV+SKLENN Y +EFA DVRLTF+NA + NP +Y
Sbjct: 91 PVDPDKLQIPDYFSIITNPMDLGTVKSKLENNQYFESEEFAADVRLTFSNASLCNPPPNY 150
Query: 263 VYAMAETLSAKFEQMFQKLSKQQQRQ 288
V+ M E L FE ++ L ++ Q
Sbjct: 151 VHNMVEKLKKIFETRWKALEEKWNYQ 176
>gi|330913598|ref|XP_003296313.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
gi|311331637|gb|EFQ95588.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
Length = 909
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C ++T+L+K K + F TPVD V+L + Y IIKKPMD GT+ L+N VY+
Sbjct: 546 LKFCESVITELLKPKYTAVTYPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 605
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
++F D +L F N +NP+G V M L FE ++++
Sbjct: 606 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEDLFESLWKE 648
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
K K AF PVD +L + +Y +I+K PMDL T+ SKL+ Y ++F D+ N
Sbjct: 356 KIKVSLAFKDPVDPHALGIPNYPEIVKHPMDLSTMESKLKEKKYNYVRDFMADLDQMITN 415
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSL 301
+ ++N K H V L A F + K+ + + + KA++ ++
Sbjct: 416 SELFNNKQHPVTQAGYNLRAYFLKGMGKMPRGAAAEEPVKPAKAKKPTV 464
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQL 358
+S +K + + L ++ + + I+ RN + + DE+ELD+E +++DTL +L
Sbjct: 762 LSFAQKQEISEGISTLGDLDMRRAVQII--RNGCPHLANVNDDEMELDMEDINDDTLREL 819
Query: 359 VRFVDNFK 366
+RF+ + +
Sbjct: 820 LRFIKSLR 827
>gi|299472993|emb|CBN77394.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
Length = 1359
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 185 GEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN---NVYKCPQE 241
G +LTKL + GW FN PVD V L L DY +II PMDLGTV KL Y +E
Sbjct: 420 GAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTVARKLAKEGAGGYLEHEE 479
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
FA DV+L F+NA+ YN VY +AE + +F
Sbjct: 480 FAADVQLVFDNAMKYNGPESEVYPVAERMKKEF 512
>gi|390478215|ref|XP_002761473.2| PREDICTED: bromodomain and WD repeat-containing protein 1-like,
partial [Callithrix jacchus]
Length = 1565
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 440 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 497
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 498 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 557
Query: 280 KLS 282
K+S
Sbjct: 558 KIS 560
>gi|260793791|ref|XP_002591894.1| hypothetical protein BRAFLDRAFT_125529 [Branchiostoma floridae]
gi|229277106|gb|EEN47905.1| hypothetical protein BRAFLDRAFT_125529 [Branchiostoma floridae]
Length = 1570
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 132 ANSDFQATHAYPTTKSQNRGGSKRAN-PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTK 190
AN +T A + +N S+RA P N K +R G T N ++ C +IL K
Sbjct: 1392 ANQSRASTQA--ANQGRNTAASRRAQQPVPNNKEER---GELHSRRTNNELKTCEDILQK 1446
Query: 191 LMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTF 250
LM++K F PVDV + DY+D+IKKPMDL T+++K Y PQEF DV F
Sbjct: 1447 LMRNKSSIYFRKPVDVEDVP--DYYDVIKKPMDLTTIKNKCVCLDYCSPQEFINDVSCIF 1504
Query: 251 NNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+NA YN G + A+TL F + ++
Sbjct: 1505 DNAHEYNKIGSDIRDKADTLEKYFMEQVEEF 1535
>gi|410970003|ref|XP_003991480.1| PREDICTED: bromodomain and WD repeat-containing protein 1-like,
partial [Felis catus]
Length = 1225
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N ++C E++ + + + F PVD+V DY DII PMD GTVR LE Y
Sbjct: 459 NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDFGTVRETLEAGNYDS 516
Query: 239 PQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 517 PLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 561
>gi|340721599|ref|XP_003399205.1| PREDICTED: bromodomain-containing protein 2-like [Bombus
terrestris]
Length = 388
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L + K + W F PVD L L DYH IIK+PMDLGT++ +LEN Y +E +D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N VYN G V MA+ L F ++ K++
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEE 176
>gi|435855|gb|AAB28651.1| CREB-binding protein [Mus sp.]
Length = 2441
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DVRL FNN
Sbjct: 1105 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVRLMFNN 1164
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1165 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1220
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1221 TIPRDA-----AYYSYQNRYHFCGKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1275
Query: 373 TEKEPM 378
+ EP
Sbjct: 1276 LDPEPF 1281
>gi|737920|prf||1923401A protein CBP
Length = 2441
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DVRL FNN
Sbjct: 1105 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVRLMFNN 1164
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1165 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1220
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1221 TIPRDA-----AYYSYQNRYHFCGKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1275
Query: 373 TEKEPM 378
+ EP
Sbjct: 1276 LDPEPF 1281
>gi|17551634|ref|NP_508124.1| Protein F13C5.2 [Caenorhabditis elegans]
gi|351061577|emb|CCD69431.1| Protein F13C5.2 [Caenorhabditis elegans]
Length = 374
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMK---DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNV 235
+ +++C IL + K D + F PVDVV L L DYH++IKKPMD+ T+R KL
Sbjct: 117 DELKKCLSILKEFEKSTHDSFTFPFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEE 176
Query: 236 YKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
Y EF ED +L NN L YN +G V A KF ++K
Sbjct: 177 YDTAVEFKEDFKLMINNCLTYNNEGDPVADFALQFRKKFAAKWKK 221
>gi|359323569|ref|XP_544889.4| PREDICTED: bromodomain and WD repeat-containing protein 1 [Canis
lupus familiaris]
Length = 2326
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR+ T + S N ++C E++ + + + F PVD+V DY DII PMD
Sbjct: 1305 KRSIKATNYVES--NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 1360
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1361 GTVRETLEAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1419
>gi|325187425|emb|CCA21963.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 950
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+++C I+ +LM + + F TPVD V+L + DY +IK+PMDLGT+R LE+ Y
Sbjct: 403 LKKCHSIIKRLMANSKAGPFLTPVDPVALGIPDYFKVIKEPMDLGTIRQNLESGFYSDAS 462
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
E VRL F+NA++YN V+ A+ L F
Sbjct: 463 ILIEHVRLVFSNAMLYNAAHSQVHIFAQKLMDDF 496
>gi|444727404|gb|ELW67902.1| Bromodomain and WD repeat-containing protein 1 [Tupaia chinensis]
Length = 2099
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N ++C E+++ + + + F PVD+V DY DII PMD GTVR LE Y
Sbjct: 1148 NWKKQCKELVSLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDFGTVRETLEAGNYDS 1205
Query: 239 PQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1206 PLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1250
>gi|321455047|gb|EFX66192.1| hypothetical protein DAPPUDRAFT_64953 [Daphnia pulex]
Length = 1587
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Query: 188 LTKLMK-DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
L KL + D F PVD L + DY DIIKKPMDL T+R K++N YK P E+ +DV
Sbjct: 740 LEKLYRQDPDSIPFRDPVDPHKLGIPDYFDIIKKPMDLATIRRKIDNGQYKDPWEYVDDV 799
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM- 305
L F+NA +YN K VY LS FEQ + + LG R+ + ++
Sbjct: 800 WLMFDNAWLYNRKTSRVYRCCTKLSEVFEQEIDPVMQS------LGYCCGRKYTFNPQVL 853
Query: 306 -ALGRSLEELPQE 317
G+ L +P++
Sbjct: 854 CCYGKQLCSIPRD 866
>gi|384499194|gb|EIE89685.1| hypothetical protein RO3G_14396 [Rhizopus delemar RA 99-880]
Length = 446
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C + L +L K K + F PVDVV+L + DY DIIK PMDL T+ KL + Y
Sbjct: 175 LKFCAQALKELKKSKYRDINYPFLHPVDVVALNIPDYVDIIKHPMDLSTIEKKLNDGEYV 234
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
P++F ED++L FNN +YNP ++ M L F++ +
Sbjct: 235 EPKDFEEDIKLMFNNCYLYNPPSLPIHKMGRQLEKVFDEKW 275
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
T++ ++ CG I+ L K + F PVD + L + DY II PMDL TV KL + Y
Sbjct: 2 TRDQIKYCGAIMRNLKKHRDATPFLQPVDYIQLNIPDYPKIIHHPMDLATVDKKLNSGQY 61
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
++ DVRL FNN +N + + + + + FE+ +++
Sbjct: 62 SSVDQWICDVRLVFNNCFKFNGPEATISMLCQNVESAFEKSLRQM 106
>gi|241679960|ref|XP_002411559.1| conserved hypothetical protein [Ixodes scapularis]
gi|215504288|gb|EEC13782.1| conserved hypothetical protein [Ixodes scapularis]
Length = 1851
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Query: 188 LTKLMK-DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
L KL + D F PVD + L++ DY DI+KKPMDL T++ KL+ Y+ P ++ +DV
Sbjct: 1066 LEKLYRQDPHSLPFRQPVDPLLLQIPDYFDIVKKPMDLSTIKRKLDTGQYQDPWQYVDDV 1125
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM- 305
L F+NA +YN K VY LS +FEQ + + LG R+ + ++
Sbjct: 1126 WLMFDNAWLYNRKTSRVYRYCTKLSEEFEQEIDPVMQS------LGYCCGRKFVFQPQVL 1179
Query: 306 -ALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHG--DEIELDIEALDND-TLSQLVRF 361
G+ L +P++ K + N C EI D L +D T +Q
Sbjct: 1180 CCFGKQLCTIPRD--------AKYWSYQNRYTYCQKCFAEIPGDTVTLGDDPTQAQTTIR 1231
Query: 362 VDNFKKAEKDKTEKEPM 378
D F + + D E EP
Sbjct: 1232 KDQFVEMKNDHLELEPF 1248
>gi|431901480|gb|ELK08502.1| Bromodomain and WD repeat-containing protein 1, partial [Pteropus
alecto]
Length = 2212
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR+ T + S N ++C E++ + + + F PVD+V DY DII PMD
Sbjct: 1240 KRSIKATNYVES--NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 1295
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1296 GTVRETLEAENYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1354
>gi|384493798|gb|EIE84289.1| hypothetical protein RO3G_08999 [Rhizopus delemar RA 99-880]
Length = 569
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C + L +L K K + F PVDVV L + DY DI+K PMDL T+ KL + Y
Sbjct: 234 MKFCAQALKELKKTKYRDINYPFLHPVDVVGLNIPDYVDIVKHPMDLSTIEKKLNDGEYA 293
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
P++F D+RL FNN +YNP V+ M L F+
Sbjct: 294 EPEDFENDIRLMFNNCYLYNPPSLPVHKMGRQLEKAFD 331
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
T++ ++ CG I+ L K + F PVD V L + DY II+ PMDL TV KL + Y
Sbjct: 54 TRDQIKYCGAIMRNLKKHRDAAPFLQPVDYVKLNIPDYPKIIRHPMDLATVDKKLNSGQY 113
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRG 294
++ DVRL FNN +N V + + + + FE+ +++ + G+ R
Sbjct: 114 DSVDQWIYDVRLVFNNCFKFNGPEAMVSMLCQNVESAFEKSLRQMPPNKNTVGVGSRS 171
>gi|328866095|gb|EGG14481.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
Length = 2116
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 61/101 (60%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
K + C I T++ K K F+ PVD V+ + Y DIIK PMDLGT+++KL+N YK
Sbjct: 497 KKNLELCNGIYTQIYKRKNAEVFHYPVDPVADGVPTYLDIIKNPMDLGTMKTKLDNGSYK 556
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
+EFA D+RL F NAL +N G ++ +A++L F F
Sbjct: 557 TIKEFAADMRLMFINALTFNLDGTPIWKLAKSLLQNFNTKF 597
>gi|170039954|ref|XP_001847781.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863561|gb|EDS26944.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 2883
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 20/197 (10%)
Query: 188 LTKLM-KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
L KL+ ++ + F PVD L + DY DI++KPMDL T+R KL++ Y P E+ +DV
Sbjct: 1371 LEKLVAQEPESIPFRMPVDPQGLGIPDYFDIVRKPMDLSTIRKKLDSGQYSDPWEYVDDV 1430
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM- 305
L F+NA +YN K VY LS FEQ + + LG R+ + ++
Sbjct: 1431 WLMFDNAWLYNRKTSRVYRYCTKLSEVFEQEIDPVMQS------LGYCCGRKYTFNPQVL 1484
Query: 306 -ALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHG--DEIELDIEALDNDTLSQLVRF- 361
G+ L +P++ K + N C +EI D+ L +D + +
Sbjct: 1485 CCYGKQLCTIPRD--------AKYYSYQNRYTYCQKCFNEIPGDMVTLGDDPMQTQTQIK 1536
Query: 362 VDNFKKAEKDKTEKEPM 378
D FK+ + D E EP
Sbjct: 1537 KDQFKEMKNDHLELEPF 1553
>gi|354493298|ref|XP_003508779.1| PREDICTED: bromodomain and WD repeat-containing protein 1 [Cricetulus
griseus]
Length = 2307
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR++ T + S + R+C +L + + + F PVD+V DY DII PMD
Sbjct: 1266 KRSSRATSYVES--DWRRQCKALLILIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 1321
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1322 GTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1380
>gi|195447028|ref|XP_002071033.1| GK25575 [Drosophila willistoni]
gi|194167118|gb|EDW82019.1| GK25575 [Drosophila willistoni]
Length = 3392
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 188 LTKLMK-DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
L KL++ + + F PVD +L + DY +I+KKPMDLGT+R+ + N Y P E+ +DV
Sbjct: 1791 LEKLLRQEPESVPFRYPVDPQALGIPDYFEIVKKPMDLGTIRNNILNGKYSDPWEYVDDV 1850
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM- 305
L F+NA +YN K VY LS FEQ + + LG R+ + ++
Sbjct: 1851 WLMFDNAWLYNRKTSRVYRYCTKLSEVFEQEIDPVMQ------ALGYCCGRKYTFNPQVL 1904
Query: 306 -ALGRSLEELP--------QEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL- 355
G+ L +P Q L K G+ R + C D I+ D L +D L
Sbjct: 1905 CCYGKQLCTIPRDAKYYSYQNSL-KEYGVASNRYT--FCQKCFND-IQGDTVTLGDDPLQ 1960
Query: 356 SQLVRFVDNFKKAEKDKTEKEPM 378
SQ D FK+ + D E EP
Sbjct: 1961 SQTQIKKDQFKEMKNDHLELEPF 1983
>gi|170284622|gb|AAI61214.1| Unknown (protein for IMAGE:8889270) [Xenopus (Silurana) tropicalis]
Length = 356
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQDF 101
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 102 NTMFTNCYIYNKSTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 154
>gi|303275083|ref|XP_003056841.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226461193|gb|EEH58486.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 854
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLEN----NVY 236
+R+C E+LT K+K F PVD + + L DY DIIK PMD GTV+ +L++ Y
Sbjct: 247 IRKCREVLTLTRKNKDARIFAMPVDPMKMGLPDYFDIIKNPMDFGTVKQRLDSKAAGTAY 306
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
P EF DV LT +N +YN V M E++ A FE+ +
Sbjct: 307 DHPMEFYRDVTLTLDNCRLYNKADSVVGTMGESVRADFEKHW 348
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS 356
R+M+ EK L L ELP+++ K++ IV +R G+ GD IE++IE LD+ TL
Sbjct: 501 RDMTYAEKQELTELLGELPEDKQAKVVQIVVERQKELGN--AEGDLIEINIEELDSVTLW 558
Query: 357 QLVRFVDNFKKAEKDK 372
+L RF + K +K K
Sbjct: 559 KLDRFARSCIKPKKKK 574
>gi|303285596|ref|XP_003062088.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226456499|gb|EEH53800.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 476
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE-NNVYKCPQ 240
++C + ++M K + F PVD +L L +YHDI+K+PMDLGTVR+ +E VY +
Sbjct: 66 KQCLASVKQVMSHKWSFPFVKPVDAAALGLENYHDIVKQPMDLGTVRANIEKGGVYAACE 125
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
E DV LTF NA++YN V+ MA TL +E
Sbjct: 126 EVNRDVELTFANAMLYNGAQTDVHVMAATLKQFWE 160
>gi|24659254|ref|NP_726307.1| CG30417 [Drosophila melanogaster]
gi|7291557|gb|AAF46981.1| CG30417 [Drosophila melanogaster]
gi|66571202|gb|AAY51566.1| IP01291p [Drosophila melanogaster]
gi|220943344|gb|ACL84215.1| CG30417-PA [synthetic construct]
gi|220953316|gb|ACL89201.1| CG30417-PA [synthetic construct]
Length = 268
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 184 CGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C I+ +L W F P+D L L DYH+I+++PMDL TVR +L Y
Sbjct: 17 CKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAA 76
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA+D+RL F N +Y H Y MA+ L FE+M+ ++
Sbjct: 77 DFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQV 117
>gi|344257246|gb|EGW13350.1| Bromodomain and WD repeat-containing protein 1 [Cricetulus griseus]
Length = 2173
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR++ T + S + R+C +L + + + F PVD+V DY DII PMD
Sbjct: 1219 KRSSRATSYVES--DWRRQCKALLILIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 1274
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1275 GTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1333
>gi|146170251|ref|XP_001017462.2| Bromodomain containing protein [Tetrahymena thermophila]
gi|146145089|gb|EAR97217.2| Bromodomain containing protein [Tetrahymena thermophila SB210]
Length = 231
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 93/180 (51%), Gaps = 12/180 (6%)
Query: 163 KAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPM 222
K K ++ K ++ +L L + F PVD ++L L DY +++KKPM
Sbjct: 4 KIKSTLKFVTETSTRKEDYKKMNTVLQSLFDNSDSLEFRQPVDYLALGLTDYPNVVKKPM 63
Query: 223 DLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLS 282
DL TV++K+ Y ++F +D++L ++N +YN +G +++ +A+ L ++++ +
Sbjct: 64 DLSTVKNKINTQSYDTIEDFLDDIQLIWDNCKLYNAQGSWIWKLADKLDKYYKKLIKNYL 123
Query: 283 KQQQRQGILGR--------GKAREMSL----EEKMALGRSLEELPQEELGKLLGIVKKRN 330
Q Q +G+ K +++ + EEK + +++L +E+LG ++ ++ N
Sbjct: 124 PMVQVQQTVGKKEKKDDKASKQQDVYIDNFQEEKSSFTAKIKQLTEEQLGSIVEQIRLEN 183
>gi|440294998|gb|ELP87938.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 364
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+R+ EI KLM +G AFN PVD +L++ Y +IK PMDLGT++ L + Y +
Sbjct: 85 VRKLREINRKLMTQPEGIAFNVPVDPDALQIPTYFSVIKSPMDLGTIKKNLSDKKYLTKE 144
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLS 282
EF +DV+LTFNNA V+N VY A L F+ F KL+
Sbjct: 145 EFYKDVKLTFNNAKVFNHPDSDVYKWAVKLDKMFDG-FWKLA 185
>gi|68051321|gb|AAY84924.1| IP09966p [Drosophila melanogaster]
Length = 276
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 184 CGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C I+ +L W F P+D L L DYH+I+++PMDL TVR +L Y
Sbjct: 25 CKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAA 84
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA+D+RL F N +Y H Y MA+ L FE+M+ ++
Sbjct: 85 DFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQV 125
>gi|403344522|gb|EJY71608.1| Bromodomain-containing protein [Oxytricha trifallax]
Length = 797
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F+ PVD + L + DY+DIIK PMDL V++KL NN Y +F DV
Sbjct: 697 LVNTLWKHQNSWIFHEPVDPIKLNIPDYYDIIKNPMDLSQVKTKLNNNEYTKINDFLYDV 756
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLS 282
+L F+N L+YN V M +++ +F++ + L+
Sbjct: 757 QLIFDNCLLYNGDSTQVSQMCKSVRDEFQKQYHILN 792
>gi|301785956|ref|XP_002928394.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain and WD repeat-containing
protein 1-like [Ailuropoda melanoleuca]
Length = 2264
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N ++C E++ + + + F PVD+V DY DII PMD GTVR LE Y
Sbjct: 1274 NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDFGTVRETLEAGNYDS 1331
Query: 239 PQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1332 PLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1376
>gi|224057449|ref|XP_002190567.1| PREDICTED: bromodomain testis-specific protein [Taeniopygia
guttata]
Length = 680
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + + W F+ PVD +L L DY+ IIKKPMDLGT++ +LE+N Y E ED
Sbjct: 39 VMRAMWRHNFSWPFHQPVDAAALNLPDYYTIIKKPMDLGTIKKRLEHNYYTKAAECIEDF 98
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEE 303
+ F N +YN G + MAE L F Q ++ ++R L +GK + EE
Sbjct: 99 KTMFWNCYMYNKSGDDIVFMAEELEKVFMQKIARMPP-EERPVSLNKGKRKGKKTEE 154
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL +L K W F P DV S I K P DLGT++ K++N Y
Sbjct: 285 LKHCNAILKELFSKKHAAYAWPFIKPEDVASASTGANQAIAKYPTDLGTIKKKMDNFEYN 344
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F + N H + AMA L FE F K+
Sbjct: 345 DIQEFATDVRLMFMSCYKRNSSDHEIVAMARKLQDVFEMHFAKI 388
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 282 SKQQQRQGILGRGK-----AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL 336
SK+ +Q +L R A+ M+ +EK L + +LP ++LGK++ I++ R
Sbjct: 501 SKRTMQQVLLARKSEDEDGAKPMNYDEKRQLSLDINKLPGDKLGKVVHIIQSREP--AMR 558
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFV 362
+ + DEIE+D E L+ TL +L R+V
Sbjct: 559 NSNPDEIEIDFETLNASTLRELERYV 584
>gi|198467430|ref|XP_001354396.2| GA13644 [Drosophila pseudoobscura pseudoobscura]
gi|198149241|gb|EAL31449.2| GA13644 [Drosophila pseudoobscura pseudoobscura]
Length = 3502
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 188 LTKLMK-DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
L KL++ + + F PVD +L + DY +I+KKPMDLGT+R+ ++N Y P E+ +DV
Sbjct: 1955 LEKLLRQEPESVPFRYPVDPQALGIPDYFEIVKKPMDLGTIRNNIQNGKYSDPWEYVDDV 2014
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM- 305
L F+NA +YN K VY LS FE + + LG R+ + ++
Sbjct: 2015 WLMFDNAWLYNRKTSRVYRYCTKLSEVFEAEIDPVMQ------ALGYCCGRKYTFNPQVL 2068
Query: 306 -ALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL-SQLVRFVD 363
G+ L +P++ +N C D I+ D L +D L SQ D
Sbjct: 2069 CCYGKQLCTIPRDA-----KYYSYQNRYTFCQKCFND-IQGDTVTLGDDPLQSQTQIKKD 2122
Query: 364 NFKKAEKDKTEKEPM 378
FK+ + D E EP
Sbjct: 2123 QFKEMKNDHLELEPF 2137
>gi|440894545|gb|ELR46968.1| Bromodomain and WD repeat-containing protein 1, partial [Bos
grunniens mutus]
Length = 2257
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N ++C E++ + + + F PVD+V DY DII PMD GTVR LE Y
Sbjct: 1252 NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDFGTVRETLEAGNYDS 1309
Query: 239 PQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1310 PLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1354
>gi|440293863|gb|ELP86910.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 358
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 40/210 (19%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C +IL L + F +PVD ++ L DY+ +I +PMDLGT+ KL VY +FA
Sbjct: 151 CKDILKTLKNLPEANPFLSPVDPIAQNLPDYYIVITEPMDLGTITKKLRMGVYDHIDDFA 210
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM-------------------------- 277
DVRLTF NA+ YNP + V+ A+TL F+
Sbjct: 211 ADVRLTFKNAMKYNPPRNMVHVFAKTLLKYFDDKIKELYHSKCTIHANVEKRHNYWNDKR 270
Query: 278 ----FQK-LSKQQQRQGI--LGRGKAREMSLEEKMALGRSLEE---LPQEELGKLLGIVK 327
FQK + + Q+ GI + + +S EEK L LEE + Q+E+ + LG
Sbjct: 271 EWIDFQKSIFELQEEAGIAAMQTTQFLPLSFEEKCDLSNKLEEVEGVKQQEVLEFLG--- 327
Query: 328 KRNSGNGSLSCHGDEIELDIEALDNDTLSQ 357
+ G + D+I+ ++ A N +S+
Sbjct: 328 -KQDAEGDVFIDLDDIDDEVLAALNSIVSR 356
>gi|195585984|ref|XP_002082758.1| GD25062 [Drosophila simulans]
gi|194194767|gb|EDX08343.1| GD25062 [Drosophila simulans]
Length = 271
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M C I+ +L + W F P+D L L DYH+I+++PMDL TVR +L Y
Sbjct: 14 MNACKVIMKRLFSNTYKNIAWVFYEPLDPQLLGLHDYHEIVQEPMDLSTVRHRLNTGCYL 73
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
+FA D+RL F N +Y H Y MA+ L FE MF
Sbjct: 74 NAVDFANDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEDMF 114
>gi|195347028|ref|XP_002040056.1| GM15561 [Drosophila sechellia]
gi|194135405|gb|EDW56921.1| GM15561 [Drosophila sechellia]
Length = 267
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M C I+ +L + W F P+D L L DYH+I+++PMDL TVR +L Y
Sbjct: 14 MNACKVIMKRLFSNTYKNIAWVFYEPLDPQLLGLHDYHEIVQEPMDLSTVRHRLNTGCYL 73
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
+FA+D+RL F N +Y H Y MA+ L FE MF
Sbjct: 74 NAVDFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEDMF 114
>gi|440790347|gb|ELR11630.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 2175
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ +C +L++L + K W FN PVD V+L L DY +++K+PMDLGT+ KL + Y
Sbjct: 55 LGQCQALLSRLKRHKHAWPFNQPVDPVALDLPDYWEVVKRPMDLGTIGDKLTSGQYAKVS 114
Query: 241 EFAEDVRLTFNNALVYNP 258
EF +D+ L ++N L+YNP
Sbjct: 115 EFLDDLELVWSNCLLYNP 132
>gi|302789912|ref|XP_002976724.1| hypothetical protein SELMODRAFT_28942 [Selaginella moellendorffii]
gi|300155762|gb|EFJ22393.1| hypothetical protein SELMODRAFT_28942 [Selaginella moellendorffii]
Length = 96
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K+GW F PV + L DY +I+KPMDLGTV+S++++ Y P+ FA DVRLTF+NA+
Sbjct: 10 KEGWVFCQPVQSLWPELVDYTKVIEKPMDLGTVKSRVQSKYYSSPKGFARDVRLTFDNAI 69
Query: 255 VYNPKGHYVYAMAETLSAKFEQMFQ 279
+N G + +A + KFE F+
Sbjct: 70 RFNAAGSMYHKLALKMRQKFETAFK 94
>gi|157041264|ref|NP_001096644.1| bromodomain and WD repeat-containing protein 1 [Bos taurus]
gi|296490937|tpg|DAA33050.1| TPA: bromodomain and WD repeat domain containing 1 [Bos taurus]
Length = 2323
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N ++C E++ + + + F PVD+V DY DII PMD GTVR LE Y
Sbjct: 1318 NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDFGTVRETLEAGNYDS 1375
Query: 239 PQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1376 PLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1420
>gi|226485709|emb|CAX75274.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 612
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C IL + + F PVDVV+L L DY+D++KK MDL T+R+KLE+ Y
Sbjct: 180 ALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESGQY 239
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA+DVRL FNN YN + V + + L F++ F K+
Sbjct: 240 HTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFDENFAKV 284
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 291 LGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEAL 350
+ R M+ +EK L + +LP E+LG+++ I+++R + C+ DEIE+D E L
Sbjct: 442 MSENNVRPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHR--DCNPDEIEIDFETL 499
Query: 351 DNDTLSQLVRFVDNFKKAEKDKTEK 375
+ TL +L ++V + + K + K
Sbjct: 500 QHTTLRELEKYVKSVLQKTKSGSRK 524
>gi|256079712|ref|XP_002576129.1| bromodomain-containing protein 3 brd3 [Schistosoma mansoni]
gi|353230012|emb|CCD76183.1| putative bromodomain-containing protein 3, brd3 [Schistosoma
mansoni]
Length = 692
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C IL + + F PVDVV+L L DY+D++KK MDL T+++KLE+ Y
Sbjct: 259 ALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYYDVVKKAMDLSTIKTKLESGQY 318
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA+DVRL FNN YN + V + + L A F++ F K+
Sbjct: 319 HTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQAIFDENFAKV 363
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 163 KAKRAAAGTXSLTSTKNAMRRCG-EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKP 221
K++ AA + S T N + E++ +L K+K W F PVD L L DY IIK P
Sbjct: 20 KSEPHAAKSHSSKITTNQLEYIKKEVVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHP 79
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
MDLGT++ +L Y E +D+ F N ++N G V AMA K EQ+
Sbjct: 80 MDLGTIKQRLNLKFYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMA----MKLEQI 131
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 291 LGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEAL 350
+ R M+ +EK L + +LP E+LG+++ I+++R + C+ DEIE+D E L
Sbjct: 522 MSENNVRPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHRD--CNPDEIEIDFETL 579
Query: 351 DNDTLSQLVRFVDNFKKAEKDKTEK 375
+ TL +L ++V + + K + K
Sbjct: 580 QHTTLRELEKYVKSVLQKTKSGSRK 604
>gi|426219471|ref|XP_004003946.1| PREDICTED: bromodomain and WD repeat-containing protein 1 [Ovis
aries]
Length = 2267
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N ++C E++ + + + F PVD+V DY DII PMD GTVR LE Y
Sbjct: 1262 NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDFGTVRETLEAGNYDS 1319
Query: 239 PQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1320 PLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1364
>gi|403271788|ref|XP_003927789.1| PREDICTED: bromodomain and WD repeat-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 2327
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1304 RRVHDGKKSIRATNCVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1361
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1362 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1421
Query: 280 KLS 282
K+S
Sbjct: 1422 KIS 1424
>gi|169409527|gb|ACA57878.1| bromodomain and WD repeat domain containing 1 isoform A (predicted)
[Callicebus moloch]
Length = 2322
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNCVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|308494761|ref|XP_003109569.1| CRE-BET-2 protein [Caenorhabditis remanei]
gi|308245759|gb|EFO89711.1| CRE-BET-2 protein [Caenorhabditis remanei]
Length = 1383
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 183 RCGEILTKLMKD----KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
R IL ++KD K W F PVD SL++ +YH+ I +PMDL T+ +L N Y C
Sbjct: 394 RLDYILFTVVKDALKHKHSWPFQAPVDAKSLQIPEYHNTIARPMDLRTIEKRLRNTYYYC 453
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLS 282
+ D++ F+N ++NP + VY MA+TL A+ L+
Sbjct: 454 ADDAIRDIKQMFSNCYMFNPPEYDVYKMAKTLDAQMTGQLANLT 497
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 184 CGEILTKL--MKDKQ-GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C ++L ++ +K+K F PVD V L++ DY ++IK+PMDL T++ KL+ Y +
Sbjct: 709 CVKLLNEMHSVKNKSFAQVFYVPVDPVKLKIVDYLEVIKEPMDLQTIKKKLDYKQYTSGE 768
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ 279
EF D+ L +N YNP G V+ A L A FE ++
Sbjct: 769 EFERDMNLMIDNCCTYNPAGSAVHQNALDLKALFESRWK 807
>gi|226485711|emb|CAX75275.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 694
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C IL + + F PVDVV+L L DY+D++KK MDL T+R+KLE+ Y
Sbjct: 253 ALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESGQY 312
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA+DVRL FNN YN + V + + L F++ F K+
Sbjct: 313 HTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFDENFAKV 357
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 163 KAKRAAAGTXSLTSTKNAMRRCG-EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKP 221
K++ AA + S T N + E++ +L K+K W F PVD L L DY IIK P
Sbjct: 14 KSEPHAAKSHSSKITTNQLEYIKKEVVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHP 73
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
MDLGT++ +L Y E +D+ F N ++N G V AMA K EQ+
Sbjct: 74 MDLGTIKQRLNLKFYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMA----MKLEQI 125
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 291 LGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEAL 350
+ R M+ +EK L + +LP E+LG+++ I+++R + C+ DEIE+D E L
Sbjct: 515 MSENNVRPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHR--DCNPDEIEIDFETL 572
Query: 351 DNDTLSQLVRFVDNFKKAEKDKTEK 375
+ TL +L ++V + + K + K
Sbjct: 573 QHTTLRELEKYVKSVLQKTKSGSRK 597
>gi|334329387|ref|XP_003341217.1| PREDICTED: bromodomain and WD repeat-containing protein 1-like
[Monodelphis domestica]
Length = 2942
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N R+C E++ + + + F PVD+V DY DII PMD GTVR LE Y
Sbjct: 1331 NWQRQCKELVDLIFQCEDSEPFRHPVDLVEYP--DYRDIIDTPMDFGTVRETLEAGNYDN 1388
Query: 239 PQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
P EF +D+RL F+NA Y P K +Y+M LSA FE+ +++S
Sbjct: 1389 PLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKIRRIS 1433
>gi|442615712|ref|NP_001259387.1| nejire, isoform E [Drosophila melanogaster]
gi|440216591|gb|AGB95230.1| nejire, isoform E [Drosophila melanogaster]
Length = 3266
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD +L + DY +I+KKPMDLGT+R+ ++N Y P E+ +DV L F+NA +YN K
Sbjct: 1723 FRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRK 1782
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM--ALGRSLEELPQE 317
VY LS FE + + LG R+ + ++ G+ L +P++
Sbjct: 1783 TSRVYRYCTKLSEVFEAEIDPVMQ------ALGYCCGRKYTFNPQVLCCYGKQLCTIPRD 1836
Query: 318 ELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL-SQLVRFVDNFKKAEKDKTEKE 376
+N C D I+ D L +D L SQ D FK+ + D E E
Sbjct: 1837 A-----KYYSYQNRYTYCQKCFND-IQGDTVTLGDDPLQSQTQIKKDQFKEMKNDHLELE 1890
Query: 377 PM 378
P
Sbjct: 1891 PF 1892
>gi|166064943|gb|ABY79110.1| bromodomain and WD repeat domain containing 1 isoform B (predicted)
[Callithrix jacchus]
Length = 2271
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|344231353|gb|EGV63235.1| Bromodomain-containing protein [Candida tenuis ATCC 10573]
Length = 503
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 158 PFGN-PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRD 213
P+ N P+ K+ AA +R C +IL L+ K + F PVD V+L + +
Sbjct: 171 PYDNRPRKKKFAAD----------LRFCNQILKDLISKKHFSYNFPFLQPVDAVALNIPN 220
Query: 214 YHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAK 273
Y DIIK+PMDL T++SKL NN Y+ EF DV L F N +NP+G V M L
Sbjct: 221 YSDIIKQPMDLSTIQSKLANNQYENGDEFESDVTLMFENCYKFNPEGTDVSMMGHKLQDI 280
Query: 274 FEQ 276
F++
Sbjct: 281 FQK 283
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD++ L + Y++ + KPMDL T+ KL + Y+ P++F +D L +N +
Sbjct: 40 KDAGPFLKPVDIIKLNIPFYYNFVPKPMDLSTIEKKLTVSAYEVPEQFIDDFNLMVSNCI 99
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + + M + + A FE+
Sbjct: 100 KFNGENSPIAKMGKNIQAYFEK 121
>gi|226485707|emb|CAX75273.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 685
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C IL + + F PVDVV+L L DY+D++KK MDL T+R+KLE+ Y
Sbjct: 253 ALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESGQY 312
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA+DVRL FNN YN + V + + L F++ F K+
Sbjct: 313 HTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFDENFAKV 357
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 163 KAKRAAAGTXSLTSTKNAMRRCG-EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKP 221
K++ AA + S T N + E++ +L K+K W F PVD L L DY IIK P
Sbjct: 14 KSEPHAAKSHSSKITTNQLEYIKKEVVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHP 73
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
MDLGT++ +L Y E +D+ F N ++N G V AMA K EQ+
Sbjct: 74 MDLGTIKQRLNLKFYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMA----MKLEQI 125
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 291 LGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEAL 350
+ R M+ +EK L + +LP +LG+++ I+++R + C+ DEIE+D E L
Sbjct: 515 MSENNVRPMTYDEKRQLSLDINKLPGGKLGRVVQIIQQREPSHR--DCNPDEIEIDFETL 572
Query: 351 DNDTLSQLVRFVDNFKKAEKDKTEK 375
+ TL +L ++V + + K + K
Sbjct: 573 QHTTLRELEKYVKSVLQKTKSGSRK 597
>gi|226485705|emb|CAX75272.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 685
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A++ C IL + + F PVDVV+L L DY+D++KK MDL T+R+KLE+ Y
Sbjct: 253 ALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESGQY 312
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
+FA+DVRL FNN YN + V + + L F++ F K+
Sbjct: 313 HTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFDENFAKV 357
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 163 KAKRAAAGTXSLTSTKNAMRRCG-EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKP 221
K++ AA + S T N + E++ +L K+K W F PVD L L DY IIK P
Sbjct: 14 KSEPHAAKSHSSKITTNQLEYIKKEVVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHP 73
Query: 222 MDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQM 277
MDLGT++ +L Y E +D+ F N ++N G V AMA K EQ+
Sbjct: 74 MDLGTIKQRLNLKFYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMA----MKLEQI 125
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 291 LGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEAL 350
+ R M+ +EK L + +LP E+LG+++ I+++R + C+ DEIE+D E L
Sbjct: 515 MSENNVRPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHR--DCNPDEIEIDFETL 572
Query: 351 DNDTLSQLVRFVDNFKKAEKDKTEK 375
+ TL +L ++V + + K + K
Sbjct: 573 QHTTLRELEKYVKSVLQKTKSGSRK 597
>gi|14970562|emb|CAC44371.1| WDR9 protein, form A [Homo sapiens]
Length = 2320
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|119630065|gb|EAX09660.1| bromodomain and WD repeat domain containing 1, isoform CRA_d [Homo
sapiens]
Length = 2320
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|118400741|ref|XP_001032692.1| Bromodomain containing protein [Tetrahymena thermophila]
gi|89287036|gb|EAR85029.1| Bromodomain containing protein [Tetrahymena thermophila SB210]
Length = 292
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
K C ++L +L+K + + F PVD L+L DY DIIK PMDLGT+ L+ YK
Sbjct: 3 KQVQSECSKVLKQLLKLPESYPFREPVDYEQLQLFDYPDIIKNPMDLGTIEQNLKAKKYK 62
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETL-----SAK--FEQMFQKL 281
P++F +D+ L +NN +YN G +Y A + +AK FEQ +KL
Sbjct: 63 QPKDFFDDIFLVWNNCKMYNQDGSNIYQQALNMEKATNAAKYAFEQSLKKL 113
>gi|47210344|emb|CAF96012.1| unnamed protein product [Tetraodon nigroviridis]
Length = 261
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C ++L +++ + W F PVDVV+L L DYHDIIK+PMDL T+R K++ Y
Sbjct: 168 LKCCSDVLKEMLSKRHYAYAWPFYVPVDVVALGLHDYHDIIKQPMDLSTIRKKMDQGEYA 227
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETL 270
EFA DV+L F+N YNP H V MA L
Sbjct: 228 EAAEFAADVQLMFSNCYKYNPPSHEVVHMARKL 260
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + W F PVD V+L L DY+ +I PMDL T+ +L+N Y E +D+
Sbjct: 31 VIKALWRHPFSWPFQQPVDAVALGLLDYYTVITNPMDLSTITKRLKNKYYWQASECIQDL 90
Query: 247 RLTFNNALVYN 257
F+N YN
Sbjct: 91 NTMFSNCYAYN 101
>gi|281182493|ref|NP_001162556.1| bromodomain and WD repeat-containing protein 1 [Papio anubis]
gi|164612461|gb|ABY63625.1| bromodomain and WD repeat domain containing 1, isoform 1 (predicted)
[Papio anubis]
Length = 2320
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVENNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|426393115|ref|XP_004062878.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain and WD repeat-containing
protein 1 [Gorilla gorilla gorilla]
Length = 2432
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1411 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1468
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1469 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1528
Query: 280 KLS 282
K+S
Sbjct: 1529 KIS 1531
>gi|119630064|gb|EAX09659.1| bromodomain and WD repeat domain containing 1, isoform CRA_c [Homo
sapiens]
Length = 2269
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|14970564|emb|CAC44372.1| WDR9 protein, form B [Homo sapiens]
Length = 2269
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|7717364|emb|CAB90452.1| homolog to cAMP response element binding and beta transducin family
proteins [Homo sapiens]
Length = 2295
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1325 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1382
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1383 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1442
Query: 280 KLS 282
K+S
Sbjct: 1443 KIS 1445
>gi|355560282|gb|EHH16968.1| WD repeat-containing protein 9, partial [Macaca mulatta]
gi|355747365|gb|EHH51862.1| WD repeat-containing protein 9, partial [Macaca fascicularis]
Length = 2254
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1233 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1290
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1291 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1350
Query: 280 KLS 282
K+S
Sbjct: 1351 KIS 1353
>gi|160333520|ref|NP_001103994.1| bromodomain containing 2b [Danio rerio]
gi|157280795|gb|ABV29330.1| truncated bromodomain-containing protein 2b [Danio rerio]
Length = 276
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 179 NAMRRCGEILTK-LMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
N ++ ++L K L + W F+ PVD L L DYH IIK+PMD+GT++ +LENN Y+
Sbjct: 73 NQLQFLHKVLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLENNYYR 132
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
E +D F N +YN + MA++L F QK+++ Q
Sbjct: 133 GASECLQDFNTMFTNCYIYNKPADDIVLMAQSLEKVF---LQKVAQMPQ 178
>gi|159794742|pdb|2DWW|A Chain A, Crystal Structure Of Bromodomain-Containing Protein 4
Length = 114
Score = 83.2 bits (204), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/103 (45%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL + K W F PVDV +L L DY DIIK P D T++SKLE+ Y+
Sbjct: 9 LKCCSGILKEXFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPXDXSTIKSKLESREYR 68
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
QEF DVRL F+N YNP H V A A L FE F K
Sbjct: 69 DAQEFGADVRLXFSNCYKYNPPDHEVVAXARKLQDVFEXRFAK 111
>gi|114684168|ref|XP_001170924.1| PREDICTED: bromodomain and WD repeat-containing protein 1 isoform 1
[Pan troglodytes]
Length = 2320
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|380813856|gb|AFE78802.1| bromodomain and WD repeat-containing protein 1 isoform B [Macaca
mulatta]
gi|383419277|gb|AFH32852.1| bromodomain and WD repeat-containing protein 1 isoform B [Macaca
mulatta]
Length = 2269
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|297287508|ref|XP_001108760.2| PREDICTED: bromodomain and WD repeat-containing protein 1 isoform 2
[Macaca mulatta]
Length = 2269
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|20177371|emb|CAC37033.2| hypothetical protein [Homo sapiens]
Length = 2269
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|56377679|dbj|BAD74071.1| WD repeat protein [Homo sapiens]
Length = 2269
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|16445438|ref|NP_387505.1| bromodomain and WD repeat-containing protein 1 isoform B [Homo
sapiens]
Length = 2269
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|410219188|gb|JAA06813.1| bromodomain and WD repeat domain containing 1 [Pan troglodytes]
gi|410307832|gb|JAA32516.1| bromodomain and WD repeat domain containing 1 [Pan troglodytes]
gi|410307834|gb|JAA32517.1| bromodomain and WD repeat domain containing 1 [Pan troglodytes]
gi|410353129|gb|JAA43168.1| bromodomain and WD repeat domain containing 1 [Pan troglodytes]
gi|410353133|gb|JAA43170.1| bromodomain and WD repeat domain containing 1 [Pan troglodytes]
Length = 2269
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|56377681|dbj|BAD74072.1| WD repeat protein WDR9-form2 [Homo sapiens]
Length = 2199
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|397629973|gb|EJK69582.1| hypothetical protein THAOC_09143 [Thalassiosira oceanica]
Length = 491
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 183 RCGEILTKLMKDKQGWA-FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
+C I+ L++ A F PVD V L Y D++KKPMDLGTV KL Y+ ++
Sbjct: 81 QCLRIVNLLLELPNAAAVFGKPVDTVKYDLPTYFDVVKKPMDLGTVSKKLTQGKYQYIED 140
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
F D+ LTFNNA+++N KGH V +A+ L F+ ++++
Sbjct: 141 FESDMHLTFNNAMLFNGKGHVVSELAQNLKNTFDDEYKQM 180
>gi|397507156|ref|XP_003824074.1| PREDICTED: bromodomain and WD repeat-containing protein 1 [Pan
paniscus]
Length = 2244
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1235 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1292
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1293 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1352
Query: 280 KLS 282
K+S
Sbjct: 1353 KIS 1355
>gi|341892468|gb|EGT48403.1| hypothetical protein CAEBREN_29751 [Caenorhabditis brenneri]
Length = 283
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 203 PVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHY 262
PVD L L DYH IIK+P+DL T+R+K++ VYK P +FA D+RL NN +YNP G
Sbjct: 3 PVDAEKLGLHDYHKIIKEPIDLKTIRTKMDTGVYKEPADFAHDIRLMLNNCFLYNPVGDP 62
Query: 263 VYAMAETLSAKFEQMFQK 280
V+ KF+++F+K
Sbjct: 63 VH----IFGMKFKEVFEK 76
>gi|326434902|gb|EGD80472.1| hypothetical protein PTSG_13143 [Salpingoeca sp. ATCC 50818]
Length = 1105
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 180 AMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A+R C +I+++L K W F PV L L DY D + PMDLGTV+ ++E+ Y
Sbjct: 341 ALRECRKIISELFSKKHAEYAWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESGHY 400
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
F DVRL F+N YNP V+ MA L FE
Sbjct: 401 SDVDSFIADVRLVFSNCYKYNPSTDPVFGMATKLHNVFE 439
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMK--DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
N ++ +++ K + D + W F PVD +L + DY IIK+PMDLGTV KL+ Y
Sbjct: 180 NQLKFMQDVVLKRLSALDSKHW-FAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERTY 238
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QE +D+ L NN VYNP + V+ A L FE+ +L
Sbjct: 239 TSAQECIDDIHLMLNNCFVYNPATNPVHIKARELETAFERCLHRL 283
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQL 358
+ ++K L + LP E+L +++ I+K N + DEIE+D + L TL +L
Sbjct: 836 FTYDQKRQLSLDINNLPMEKLPRVVQIIK--NYEPSLTHTNPDEIEIDFDKLRPRTLREL 893
Query: 359 VRFVDNFKKA 368
R+V N KA
Sbjct: 894 ERYVRNCLKA 903
>gi|16445436|ref|NP_061836.2| bromodomain and WD repeat-containing protein 1 isoform A [Homo
sapiens]
gi|313104296|sp|Q9NSI6.4|BRWD1_HUMAN RecName: Full=Bromodomain and WD repeat-containing protein 1;
AltName: Full=WD repeat-containing protein 9
Length = 2320
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1299 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1356
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1416
Query: 280 KLS 282
K+S
Sbjct: 1417 KIS 1419
>gi|441672872|ref|XP_003280308.2| PREDICTED: bromodomain and WD repeat-containing protein 1, partial
[Nomascus leucogenys]
Length = 2164
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 165 KRAAAGTXSLTSTK----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKK 220
+R G S+ +T N ++C E++ + + + F PVD+V DY DII
Sbjct: 1293 RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDT 1350
Query: 221 PMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQ 279
PMD GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +
Sbjct: 1351 PMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMK 1410
Query: 280 KLS 282
K+S
Sbjct: 1411 KIS 1413
>gi|426020769|sp|F7DRV9.1|BRDT_XENTR RecName: Full=Bromodomain testis-specific protein
Length = 933
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++M K W F V+ L D D IK PMDL T+R K+EN +YK
Sbjct: 284 LKHCNNILNEMMSKKHAEYAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYK 341
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA DVRL F N+ YNP + V MA + FE MF K+
Sbjct: 342 DTQDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKI 385
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F PVD L L DY+ IIK PMDL T+R +LE N Y + +D
Sbjct: 40 VLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG-RG 294
F N +YN G + M++ L F + ++ ++ ++G RG
Sbjct: 100 NTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEMPHEEIELSVVGNRG 148
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
+ MS +EK L + +LP E+LG+++ I++ R + +EIE+D E L TL
Sbjct: 502 VKPMSYDEKRQLSLDINKLPGEKLGRIVHIIQSREPSLK--DSNPNEIEIDFETLKQSTL 559
Query: 356 SQLVRFV 362
L ++V
Sbjct: 560 RHLEKYV 566
>gi|24640865|ref|NP_524642.2| nejire, isoform B [Drosophila melanogaster]
gi|320541926|ref|NP_001188576.1| nejire, isoform D [Drosophila melanogaster]
gi|22833041|gb|AAF46516.2| nejire, isoform B [Drosophila melanogaster]
gi|318069357|gb|ADV37658.1| nejire, isoform D [Drosophila melanogaster]
Length = 3276
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD +L + DY +I+KKPMDLGT+R+ ++N Y P E+ +DV L F+NA +YN K
Sbjct: 1723 FRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRK 1782
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM--ALGRSLEELP-- 315
VY LS FE + + LG R+ + ++ G+ L +P
Sbjct: 1783 TSRVYRYCTKLSEVFEAEIDPVMQ------ALGYCCGRKYTFNPQVLCCYGKQLCTIPRD 1836
Query: 316 ------QEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL-SQLVRFVDNFKKA 368
Q L K G+ R + C D I+ D L +D L SQ D FK+
Sbjct: 1837 AKYYSYQNSL-KEYGVASNRYT--YCQKCFND-IQGDTVTLGDDPLQSQTQIKKDQFKEM 1892
Query: 369 EKDKTEKEPM 378
+ D E EP
Sbjct: 1893 KNDHLELEPF 1902
>gi|393911119|gb|EJD76176.1| bromodomain containing protein [Loa loa]
Length = 1163
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C ++ +L K W F PVDV L+L DY+DI+K PMDLGT+R KL+ Y
Sbjct: 360 MKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYA 419
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+E DV L N YNP ++ L FE + ++
Sbjct: 420 TPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKWHQM 463
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%)
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAED 245
E+L M+ K W F PVD V L L DYH +IK+PMD+ T+ +L N Y ++ +D
Sbjct: 121 EVLKPAMRHKHAWPFMKPVDAVRLGLPDYHKVIKRPMDMNTIEKRLRNCYYYSAKDCMQD 180
Query: 246 VRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F+N +N V M + + + + + L Q+
Sbjct: 181 FESIFSNCYKFNQNEDDVSLMCKNVENLYREKMKLLPPQE 220
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
A MS +EK L + +LP ++L ++ I++ R G + +EIE+D E L TL
Sbjct: 766 AEPMSYDEKRQLSLDINKLPGDKLSSVVSIIESREQLPG---FNPEEIEIDFETLKATTL 822
Query: 356 SQLVRFV 362
+L FV
Sbjct: 823 RELEAFV 829
>gi|384486789|gb|EIE78969.1| hypothetical protein RO3G_03674 [Rhizopus delemar RA 99-880]
Length = 489
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 175 TSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL 231
T++ M+ C + + +L K K + F PVD V+L + DY I+K PMDL T+ +KL
Sbjct: 183 TASSKVMKYCLQTVKELKKQKYKHLSFPFLYPVDPVALNIPDYPTIVKHPMDLSTIETKL 242
Query: 232 ENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
N Y P FA D++L F+N +YNP +Y +A+ L A F++
Sbjct: 243 NRNEYDSPDAFAADIKLMFDNCYLYNPPHLPIYDLAKQLQAIFDE 287
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%)
Query: 147 SQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDV 206
++N+ A+ +P +++ + T TK+ M+ C I+ L K + F PVD
Sbjct: 4 TENQTFKSAADTLPSPPSQKQLSITGGRPMTKDQMKYCAAIMRNLKKHRDAAPFLNPVDY 63
Query: 207 VSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAM 266
+ L + DY +IK+P+DL + KL N Y +F DVRL FNN YN + +
Sbjct: 64 IKLNVPDYPQVIKRPIDLTLIDQKLNQNEYVTVDDFVADVRLVFNNCFKYNGPEAMISVL 123
Query: 267 AETLSAKFEQMFQKL 281
+ + + FE+ +++
Sbjct: 124 CQNVESAFEKGLRQM 138
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 11/77 (14%)
Query: 295 KAREMS---------LEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIEL 345
K REMS E+K L S+ L ++L +++ I+ R+S S +EIEL
Sbjct: 373 KYREMSSDEEDSGFTFEQKRQLSESINNLTGDQLNEVVDII--RSSMPNLDSVGEEEIEL 430
Query: 346 DIEALDNDTLSQLVRFV 362
DI++LD +TL++L +V
Sbjct: 431 DIDSLDINTLTRLNDYV 447
>gi|426225993|ref|XP_004007141.1| PREDICTED: uncharacterized protein LOC101109872 [Ovis aries]
Length = 589
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 226 TVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
++ K+++ Y Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 331 VLQKKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 386
>gi|195350536|ref|XP_002041796.1| GM11349 [Drosophila sechellia]
gi|194123601|gb|EDW45644.1| GM11349 [Drosophila sechellia]
Length = 2950
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD +L + DY +I+KKPMDLGT+R+ ++N Y P E+ +DV L F+NA +YN K
Sbjct: 1486 FRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRK 1545
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM--ALGRSLEELP-- 315
VY LS FE + + LG R+ + ++ G+ L +P
Sbjct: 1546 TSRVYRYCTKLSEVFEAEIDPVMQ------ALGYCCGRKYTFNPQVLCCYGKQLCTIPRD 1599
Query: 316 ------QEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL-SQLVRFVDNFKKA 368
Q L K G+ R + C D I+ D L +D L SQ D FK+
Sbjct: 1600 AKYYSYQNSL-KEYGVASNRYT--YCQKCFND-IQGDTVTLGDDPLQSQTQIKKDQFKEM 1655
Query: 369 EKDKTEKEPM 378
+ D E EP
Sbjct: 1656 KNDHLELEPF 1665
>gi|320541924|ref|NP_001188575.1| nejire, isoform C [Drosophila melanogaster]
gi|318069356|gb|ADV37657.1| nejire, isoform C [Drosophila melanogaster]
Length = 3282
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD +L + DY +I+KKPMDLGT+R+ ++N Y P E+ +DV L F+NA +YN K
Sbjct: 1729 FRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRK 1788
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM--ALGRSLEELP-- 315
VY LS FE + + LG R+ + ++ G+ L +P
Sbjct: 1789 TSRVYRYCTKLSEVFEAEIDPVMQ------ALGYCCGRKYTFNPQVLCCYGKQLCTIPRD 1842
Query: 316 ------QEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL-SQLVRFVDNFKKA 368
Q L K G+ R + C D I+ D L +D L SQ D FK+
Sbjct: 1843 AKYYSYQNSL-KEYGVASNRYT--YCQKCFND-IQGDTVTLGDDPLQSQTQIKKDQFKEM 1898
Query: 369 EKDKTEKEPM 378
+ D E EP
Sbjct: 1899 KNDHLELEPF 1908
>gi|19173489|ref|NP_597292.1| GENERAL TRANSCRIPTION FACTOR [Encephalitozoon cuniculi GB-M1]
gi|19171078|emb|CAD26468.1| GENERAL TRANSCRIPTION FACTOR [Encephalitozoon cuniculi GB-M1]
gi|449328789|gb|AGE95065.1| general transcription factor [Encephalitozoon cuniculi]
Length = 370
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ ++ C +ILT+L ++ F PVD V L + DY + IK PMDL T+R KL++ Y+
Sbjct: 14 EHQLKYCSQILTRLKRNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRKKLDSKEYE 73
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF----QKLSKQQQRQGILGR 293
P+ F D+RL F+N YNP G V+ M + L A + + Q++ K++++ +
Sbjct: 74 GPEGFDGDMRLMFSNCYTYNPPGTVVHEMGKGLEAVYTDLMAGMPQEIPKKRKKTEMPAV 133
Query: 294 GKAREM 299
G+ +++
Sbjct: 134 GRPKQV 139
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 160 GNPK-AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYH 215
G PK KR G+ + + C E L+ L+K K W F PVD + Y+
Sbjct: 134 GRPKQVKRNVKGSDGMKAEDYEF--CSETLSDLVKPKHKAYNWPFLEPVD--GDLVPGYY 189
Query: 216 DIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
+IK+PMDL T+RSKLE Y+ +EF D+ L N +N G VY + +
Sbjct: 190 SVIKEPMDLQTMRSKLEQRRYQSVEEFGRDLELIVENCKKFNAPGTEVYVCGQEFEKAVK 249
Query: 276 QMFQKLSKQQQRQGI--LGRG-----------------------KAREMSLEEKMALGRS 310
QK+S + I L R +R SL E++++G +
Sbjct: 250 MHMQKVSPHDIKSRITELKRKVMSYSREIRMLESKLMEQTGEMPTSRAYSLNERVSIGNA 309
Query: 311 LEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEK 370
+ + +E+ + IV K +G DEIE+D+ + + + ++ ++ + E
Sbjct: 310 ILNMSKEQTESVAKIVLKNGAGE---FVENDEIEVDMRTIPDHVVEEIDMYIKSINVGED 366
Query: 371 DKTE 374
+ E
Sbjct: 367 VRDE 370
>gi|62945212|dbj|BAD97681.1| open reading frame X [Mus musculus]
Length = 387
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LENN Y E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL----GRGKARE 298
F N +YN + MA+ L F QK+++ Q + L +GK R+
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVELLPPAPKGKGRK 157
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVR 228
+R C IL +++ K W F PVD +L L DYHDIIK PMDL TV+
Sbjct: 311 LRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 361
>gi|194890403|ref|XP_001977304.1| GG18963 [Drosophila erecta]
gi|190648953|gb|EDV46231.1| GG18963 [Drosophila erecta]
Length = 3296
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD +L + DY +I+KKPMDLGT+R+ ++N Y P E+ +DV L F+NA +YN K
Sbjct: 1725 FRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRK 1784
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM--ALGRSLEELP-- 315
VY LS FE + + LG R+ + ++ G+ L +P
Sbjct: 1785 TSRVYRYCTKLSEVFEAEIDPVMQ------ALGYCCGRKYTFNPQVLCCYGKQLCTIPRD 1838
Query: 316 ------QEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL-SQLVRFVDNFKKA 368
Q L K G+ R + C D I+ D L +D L SQ D FK+
Sbjct: 1839 AKYYSYQNSL-KEYGVASNRYT--YCQKCFND-IQGDTVTLGDDPLQSQTQIKKDQFKEM 1894
Query: 369 EKDKTEKEPM 378
+ D E EP
Sbjct: 1895 KNDHLELEPF 1904
>gi|312085274|ref|XP_003144613.1| hypothetical protein LOAG_09036 [Loa loa]
Length = 1022
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C ++ +L K W F PVDV L+L DY+DI+K PMDLGT+R KL+ Y
Sbjct: 219 MKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYA 278
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+E DV L N YNP ++ L FE + ++
Sbjct: 279 TPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKWHQM 322
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
A MS +EK L + +LP ++L ++ I++ R G + +EIE+D E L TL
Sbjct: 625 AEPMSYDEKRQLSLDINKLPGDKLSSVVSIIESREQLPG---FNPEEIEIDFETLKATTL 681
Query: 356 SQLVRFV 362
+L FV
Sbjct: 682 RELEAFV 688
>gi|326426578|gb|EGD72148.1| CBP-A protein [Salpingoeca sp. ATCC 50818]
Length = 2186
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 122 ERVRNLGSRIANSDFQATHAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTK--- 178
+R+++LG++I + QA H T K ++R +A R G+ K
Sbjct: 921 DRIKSLGAKIED---QAFHKSQTQKEYFEMLAQRIYQLQKAQASRTPTGSAHKLVPKPKK 977
Query: 179 ----NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENN 234
+ + K+ + F PVD V+L DY+DIIK+PMDLGT+ KL+
Sbjct: 978 WDREELLHHFWPLHEKIRSHEDSHPFLEPVDTVALNCSDYYDIIKQPMDLGTIGKKLKAG 1037
Query: 235 VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETL----SAKFEQMFQKL 281
YK P E+ +D+RL F NA YN + V MA+TL +A+ E + +++
Sbjct: 1038 DYKDPWEYCDDMRLMFRNAFTYNGEKSIVGKMAKTLFNLWNAEIEPIMKRM 1088
>gi|195481738|ref|XP_002101759.1| GE15438 [Drosophila yakuba]
gi|194189283|gb|EDX02867.1| GE15438 [Drosophila yakuba]
Length = 3304
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD +L + DY +I+KKPMDLGT+R+ ++N Y P E+ +DV L F+NA +YN K
Sbjct: 1737 FRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRK 1796
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM--ALGRSLEELP-- 315
VY LS FE + + LG R+ + ++ G+ L +P
Sbjct: 1797 TSRVYRYCTKLSEVFEAEIDPVMQ------ALGYCCGRKYTFNPQVLCCYGKQLCTIPRD 1850
Query: 316 ------QEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL-SQLVRFVDNFKKA 368
Q L K G+ R + C D I+ D L +D L SQ D FK+
Sbjct: 1851 AKYYSYQNSL-KEYGVASNRYT--YCQKCFND-IQGDTVTLGDDPLQSQTQIKKDQFKEM 1906
Query: 369 EKDKTEKEPM 378
+ D E EP
Sbjct: 1907 KNDHLELEPF 1916
>gi|170587322|ref|XP_001898426.1| Bromodomain containing protein [Brugia malayi]
gi|158594150|gb|EDP32738.1| Bromodomain containing protein [Brugia malayi]
Length = 960
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C ++ +L K W F PVDV L+L DY+DI+K PMDLGT+R KL+ Y
Sbjct: 402 MKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYA 461
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQ 284
P+E DV L N YNP ++ L FE ++++ ++
Sbjct: 462 TPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKWRQMPEE 508
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 66/167 (39%), Gaps = 46/167 (27%)
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY--------- 236
E+L M+ K W F PVD V L L DYH +IK+PMD+ T+ +L N Y
Sbjct: 121 EVLKPAMRHKHAWPFMKPVDAVRLGLPDYHKVIKRPMDMNTIEKRLRNCYYYSAKDCMQV 180
Query: 237 ----------KCPQEFAE------------------------DVRLTFNNALVYNPKGHY 262
+C F E DV FNN YNP +
Sbjct: 181 SRPLFFELETECIWTFTERATSTGIYASDCVMTYFEFFNSSDDVMTMFNNCYTYNPPEYG 240
Query: 263 VYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGR 309
VY MA+ L + + KL+ + + R A+ + + K + GR
Sbjct: 241 VYMMAKNLE---QYILSKLAAMPPEEVEIPRPTAKRAAGKSKKSTGR 284
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
A MS +EK L + +LP ++L ++ I++ R G + +EIE+D E L TL
Sbjct: 808 AEPMSYDEKRQLSLDINKLPGDKLSSVVSIIESREQLPG---FNPEEIEIDFETLKATTL 864
Query: 356 SQLVRFV 362
+L FV
Sbjct: 865 RELEAFV 871
>gi|326434901|gb|EGD80471.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
Length = 905
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 180 AMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
A+R C +I+++L K W F PV L L DY D + PMDLGTV+ ++E+ Y
Sbjct: 341 ALRECRKIISELFSKKHAEYAWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESGHY 400
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
F DVRL F+N YNP V+ MA L FE
Sbjct: 401 SDVDSFIADVRLVFSNCYKYNPSTDPVFGMATKLHNVFE 439
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMK--DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
N ++ +++ K + D + W F PVD +L + DY IIK+PMDLGTV KL+ Y
Sbjct: 180 NQLKFMQDVVLKRLSALDSKHW-FAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERTY 238
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QE +D+ L NN VYNP + V+ A L FE+ +L
Sbjct: 239 TSAQECIDDIHLMLNNCFVYNPATNPVHIKARELETAFERCLHRL 283
>gi|344294785|ref|XP_003419096.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain and WD repeat-containing
protein 1-like [Loxodonta africana]
Length = 2405
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR++ T + S N ++C E++ + + + F PVD+V DY +II PMD
Sbjct: 1379 KRSSKATNYVES--NWKKQCKELVHLIFQCEDSEPFRQPVDLVEYP--DYREIIDTPMDF 1434
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1435 GTVRETLEAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1493
>gi|223998448|ref|XP_002288897.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976005|gb|EED94333.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 316
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCP 239
++RR +I+ L+ F PVD + L DY ++K+ MDLGTV+ KL Y
Sbjct: 18 SLRRMKKIVDNLLARADSVPFREPVDWKGMELYDYPKVVKRMMDLGTVKKKLTGGKYADA 77
Query: 240 QEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG 292
E A+DVR + N ++YN G YA+AE S +FE+ FQK+ + I G
Sbjct: 78 SECADDVRQVWKNCMLYNADGSDFYALAELFSRRFEERFQKIMDEFGEDVICG 130
>gi|365991080|ref|XP_003672369.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
gi|343771144|emb|CCD27126.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
Length = 733
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 153 SKRANPFGN--PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVV 207
SK P+ N PK+K+ + AM+ C IL +L K + F PVD V
Sbjct: 338 SKDIYPYENKKPKSKKL----------QQAMKFCQSILKELTNKKHASFNYPFLEPVDPV 387
Query: 208 SLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMA 267
+L L Y+D +K+PMDLGT+ KL N Y+ +F +DVRL F N +NP G V M
Sbjct: 388 ALNLPTYYDYVKEPMDLGTISKKLNNWEYETMDQFGDDVRLVFKNCYAFNPDGTIVNMMG 447
Query: 268 ETLSAKF 274
L F
Sbjct: 448 HRLEEVF 454
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD+V+L + Y++ + +PMDL T+ KL N Y P++ +D L NN++
Sbjct: 199 KDARPFLKPVDIVALNIPFYYNYVPRPMDLSTIEKKLNVNAYSEPEQITDDFNLMVNNSI 258
Query: 255 VYNPKGHYVYAMAETLSAKFEQMFQKLS 282
+N + MA + A FE+ ++
Sbjct: 259 KFNGPTAVISQMARNIQAAFEKHMLNMA 286
>gi|254566451|ref|XP_002490336.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|238030132|emb|CAY68055.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|328350730|emb|CCA37130.1| Bromodomain-containing factor 1 [Komagataella pastoris CBS 7435]
Length = 640
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C +++ +LM K + F PVD V+L Y DI+K+PMDLGT+++KL N+ Y+
Sbjct: 294 LRFCNQVMKELMSKKHQNYSFPFLQPVDPVALDCPTYFDIVKEPMDLGTIQAKLANSEYE 353
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
+F +VRL F N +NP+G V M T+ F + ++K
Sbjct: 354 NADQFEREVRLVFTNCYKFNPEGSPVNVMGHTMENVFNKEWEK 396
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD L + Y++ IK+PMDL T+ K+ + Y+ P ED L +N
Sbjct: 147 KDAKPFLLPVDTEKLGIPLYYNYIKRPMDLSTIERKISVSAYESPDIIVEDFNLMVDNCR 206
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + + MA+ + A FE+
Sbjct: 207 KFNGEDTPITRMAKNIQASFEK 228
>gi|170582857|ref|XP_001896320.1| Bromodomain containing protein [Brugia malayi]
gi|158596511|gb|EDP34844.1| Bromodomain containing protein [Brugia malayi]
Length = 1009
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C ++ +L K W F PVDV L+L DY+DI+K PMDLGT+R KL+ Y
Sbjct: 218 MKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYA 277
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P+E DV L N YNP ++ L FE ++++
Sbjct: 278 TPEELRADVILICENCYKYNPTSDPIHQHGRALQKYFEDKWRQM 321
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
A MS +EK L + +LP ++L ++ I++ R G + +EIE+D E L TL
Sbjct: 618 AEPMSYDEKRQLSLDINKLPGDKLSSVVSIIESREQLPG---FNPEEIEIDFETLKATTL 674
Query: 356 SQLVRFV 362
+L FV
Sbjct: 675 RELEAFV 681
>gi|165970446|gb|AAI58274.1| LOC100144959 protein [Xenopus (Silurana) tropicalis]
Length = 476
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C IL ++M K W F V+ L D D IK PMDL T+R K+EN +YK
Sbjct: 294 LKHCNNILNEMMSKKHAEYAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYK 351
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
Q+FA D+RL F N+ YNP + V MA + FE MF K+
Sbjct: 352 DTQDFASDIRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKI 395
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L + W F PVD L L DY+ IIK PMDL T+R +LE N Y + +D
Sbjct: 40 VLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG-RG 294
F N +YN G + M++ L F + ++ ++ ++G RG
Sbjct: 100 NTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEMPHEEIELSVVGNRG 148
>gi|145549063|ref|XP_001460211.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428040|emb|CAK92814.1| unnamed protein product [Paramecium tetraurelia]
Length = 473
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Query: 125 RNLGSRIANSDFQA-THAYPTTKSQNRGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRR 183
+ L + N DF+ + +P A NP A S+ + +
Sbjct: 320 KGLSKEVTNEDFEKFSQEFPEI----------AKLLINPDDTIDEAMISSIKEDQMWDKI 369
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
+IL +L K KQ F PVDV ++ DY+DI++ PMD GT++SKL NN Y+C +EF
Sbjct: 370 AKKILNQLWKLKQSVYFLEPVDVNRYQILDYYDIVRNPMDFGTIKSKLSNNQYRCLKEFH 429
Query: 244 EDVRLTFNNALVYN 257
D+ L F+N ++YN
Sbjct: 430 IDMLLVFDNCVLYN 443
>gi|268578307|ref|XP_002644136.1| Hypothetical protein CBG04495 [Caenorhabditis briggsae]
Length = 876
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 184 CGEILTKL--MKDKQ-GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C +L ++ +K+K F PVD + L++ DY D++K PMDL T++ KL++ Y P+
Sbjct: 347 CVRLLNEMHSLKNKSFAQVFYVPVDPIKLKIADYLDVVKNPMDLQTMKKKLDHKQYAEPE 406
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ 279
EF D+ L +N +YNPKG VY A L A FEQ ++
Sbjct: 407 EFVADMNLMIDNCCLYNPKGSSVYQNALDLKALFEQRWK 445
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + +K K W F PV+ V+L + DYH I +PMDL T+ +L N+ Y + +D+
Sbjct: 79 VIKEAVKHKHSWPFQEPVNAVALAIPDYHKTITRPMDLRTIEKRLRNSYYWSVDDAIKDL 138
Query: 247 RLTFNNALVYNPKGHYVYAMAETL 270
F N +N +Y M E +
Sbjct: 139 NTLFQNCKTFNDNNDDIYIMCENV 162
>gi|344292152|ref|XP_003417792.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein-like [Loxodonta
africana]
Length = 2438
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1110 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1169
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1170 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1225
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1226 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1280
Query: 373 TEKEPM--CSQVA 383
+ EP C + A
Sbjct: 1281 LDPEPFVDCKECA 1293
>gi|145503576|ref|XP_001437763.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404918|emb|CAK70366.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
K RR +I+ +L+ F PVD +L L DY I+KKPMDLGTV+ KL +N YK
Sbjct: 11 KEEQRRLNQIVQQLLDSNDSVEFRQPVDYKALNLHDYITIVKKPMDLGTVQRKLNSNTYK 70
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK-------------LSKQ 284
+E +D++L ++N +YN ++ +AE K E++F+K +
Sbjct: 71 TVEECLDDIQLIWDNCKLYNGSQSWITKIAE----KLERLFKKNVRNYLPLVNLPQFVPK 126
Query: 285 QQRQG--ILGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDE 342
Q+ G + ++S +K+ +L++L E++G ++ ++ + S N + G++
Sbjct: 127 QKDAGADVFQEEPQDQVSYNDKVEFSNNLKQLAPEQIGLIVHMI-QNTSPNAFVEIEGEK 185
Query: 343 IELDIEALD 351
++ ++ ++
Sbjct: 186 YQIIVDYIE 194
>gi|340707459|pdb|2YDW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707460|pdb|2YDW|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707461|pdb|2YDW|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707481|pdb|2YEK|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707482|pdb|2YEK|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707483|pdb|2YEK|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|393715359|pdb|4AKN|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715360|pdb|4AKN|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715361|pdb|4AKN|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
Length = 153
Score = 82.0 bits (201), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 40 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 99
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 100 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 139
>gi|50413693|ref|XP_457302.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
gi|49652967|emb|CAG85306.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
Length = 639
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C + + +L+ K + F PVD V+L + +Y +++K+PMDLGT+++KL NN Y+
Sbjct: 314 LRFCNQTVKELISKKHYNYNFPFLAPVDTVALNIPNYAEVVKEPMDLGTIQTKLANNQYE 373
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
EF DVRL F N +NP+G V M L + F++
Sbjct: 374 NGDEFERDVRLVFKNCYAFNPEGTDVNMMGHRLESIFDK 412
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ + + + F PVD+V L + Y++ I +PMDL T+ K+ N Y+ P ED
Sbjct: 156 VIKAVKRLRDAGPFVHPVDIVKLNIPFYYNYIPRPMDLSTIERKINANAYEEPSRIVEDF 215
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
L N +N + + MA+ + A FE+
Sbjct: 216 NLMVANCCKFNGEQSGISKMAKNVQAHFEK 245
>gi|194388284|dbj|BAG65526.1| unnamed protein product [Homo sapiens]
Length = 1198
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 717 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 776
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 777 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 832
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 833 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 887
Query: 373 TEKEPM 378
+ EP
Sbjct: 888 LDPEPF 893
>gi|347963028|ref|XP_311133.5| AGAP000029-PA [Anopheles gambiae str. PEST]
gi|333467394|gb|EAA06516.6| AGAP000029-PA [Anopheles gambiae str. PEST]
Length = 4121
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
Query: 188 LTKLM-KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
L KL+ ++ + F PVD SL + DY DI+++PMDL T+R KLE+ Y+ P+E+ +DV
Sbjct: 2616 LEKLVTQEPESIPFRMPVDPNSLGIPDYFDIVRQPMDLSTIRKKLESGQYQDPREYVDDV 2675
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM- 305
L F+NA +YN K VY LS FE + + LG R+ + ++
Sbjct: 2676 WLMFDNAWLYNRKTSRVYRYCTKLSEVFEMEIDPVMQS------LGYCCGRKYTFNPQVL 2729
Query: 306 -ALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHG--DEIELDIEALDNDTL-SQLVRF 361
G+ L +P++ K + N C +EI D L +D + SQ
Sbjct: 2730 CCYGKQLCTIPRD--------AKYYSYQNRYTYCQKCFNEIPGDTVTLGDDPMQSQTQIK 2781
Query: 362 VDNFKKAEKDKTEKEP 377
D FK+ + D E EP
Sbjct: 2782 KDQFKEMKNDHLELEP 2797
>gi|402907487|ref|XP_003916506.1| PREDICTED: CREB-binding protein-like [Papio anubis]
Length = 2115
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 777 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 836
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 837 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 892
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 893 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 947
Query: 373 TEKEPM 378
+ EP
Sbjct: 948 LDPEPF 953
>gi|196119854|gb|ACG69450.1| bromodomain and WD repeat-containing protein 1 (predicted) [Otolemur
garnettii]
Length = 2117
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR++ T + S N ++C E++ + + + F PVD+V DY DII PMD
Sbjct: 1199 KRSSRATNYVES--NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 1254
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K++
Sbjct: 1255 GTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIT 1313
>gi|395856572|ref|XP_003800700.1| PREDICTED: bromodomain and WD repeat-containing protein 1 [Otolemur
garnettii]
Length = 2264
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR++ T + S N ++C E++ + + + F PVD+V DY DII PMD
Sbjct: 1306 KRSSRATNYVES--NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 1361
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR L+ Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K++
Sbjct: 1362 GTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIT 1420
>gi|401827500|ref|XP_003887842.1| chromatin remodeling bromodomain-containing transcription factor
[Encephalitozoon hellem ATCC 50504]
gi|392998849|gb|AFM98861.1| chromatin remodeling bromodomain-containing transcription factor
[Encephalitozoon hellem ATCC 50504]
Length = 370
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ ++ C ++LT++ ++ F PVD V L + DY + IK PMDL T+R KL+ Y
Sbjct: 14 EHQLKYCSQVLTRIKRNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRKKLDAKEYS 73
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF----QKLSKQQQRQGI 290
P+ F D++L FNN YNP G V+ M + L + + M Q++SK++++ +
Sbjct: 74 GPEGFDSDMKLMFNNCYTYNPPGTVVHDMGKALESVYNDMMEGMPQEVSKKRKKTEV 130
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 33/219 (15%)
Query: 184 CGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
C E+L L++ K W F PVD + Y+ +IK+PMD+ T+R+KLE Y +
Sbjct: 157 CSEVLNDLVRPKHKAYNWPFLEPVD--GDLVPGYYSVIKEPMDMQTMRNKLEQRKYHSVE 214
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYA------------MAETLSAKFEQMFQKLSKQ---Q 285
EF D+ L N +N G VYA M +TL A + +L ++
Sbjct: 215 EFGRDLELIVENCKKFNAPGTEVYACGQEFERAIKAHMEKTLPADIKSRISELKRKVVSY 274
Query: 286 QRQGILGRGK----------AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGS 335
R+ + K +R SL E++++G ++ + +E+ + IV K +G
Sbjct: 275 TREIRMLESKLMEQTGEAPSSRAYSLSERVSIGNAILNMTKEQTENVAKIVLKNGAGE-- 332
Query: 336 LSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDKTE 374
DEIE+D+ + + + ++ ++ + E + E
Sbjct: 333 -FVENDEIEVDMRTIPDHVVEEIDMYIKSINVGEDVRDE 370
>gi|371927839|pdb|4A9E|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927840|pdb|4A9E|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927841|pdb|4A9E|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927842|pdb|4A9F|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927843|pdb|4A9F|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927844|pdb|4A9F|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927869|pdb|4A9H|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927870|pdb|4A9H|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927871|pdb|4A9H|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927872|pdb|4A9I|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927873|pdb|4A9I|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927874|pdb|4A9I|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927875|pdb|4A9J|A Chain A, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927876|pdb|4A9J|B Chain B, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927877|pdb|4A9J|C Chain C, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|374977910|pdb|4A9M|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977911|pdb|4A9M|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977912|pdb|4A9M|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977913|pdb|4A9N|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977914|pdb|4A9N|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977915|pdb|4A9N|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977916|pdb|4A9O|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977917|pdb|4A9O|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977918|pdb|4A9O|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|383875671|pdb|4ALH|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875672|pdb|4ALH|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875673|pdb|4ALH|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|393715366|pdb|4ALG|A Chain A, N-Terminal Bromodomain Of Human Brd2 With Ibet-151
Length = 154
Score = 82.0 bits (201), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD V L L DYH IIK+PMD+GT++ +LENN Y E +D
Sbjct: 40 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 99
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ 286
F N +YN + MA+TL F Q + +++Q
Sbjct: 100 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQEEQ 139
>gi|50303459|ref|XP_451671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640803|emb|CAH02064.1| KLLA0B03113p [Kluyveromyces lactis]
Length = 661
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
M+ C ++L +L+ K + F PVD V+L Y D +K+PMDLGTV+ KL N Y+
Sbjct: 282 MKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQ 341
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
+EF DVRL F N +NP+G V M L F
Sbjct: 342 TSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVF 378
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F+ PVD V+L + Y + I +PMDL T+ KL + Y+ P++ +D L +N +
Sbjct: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCI 193
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 194 KFNGDKAVISQMARNIQASFEK 215
>gi|380792581|gb|AFE68166.1| CREB-binding protein isoform a, partial [Macaca mulatta]
Length = 2205
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1104 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1163
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1164 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1219
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1220 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1274
Query: 373 TEKEPM 378
+ EP
Sbjct: 1275 LDPEPF 1280
>gi|429851515|gb|ELA26702.1| transcription regulator bdf1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 921
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 181 MRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C E+L++LM K +AF PVD V+L + Y IIK+PMDLGT+ KL+N Y+
Sbjct: 513 LQFCYEVLSELMDQKHAQINFAFLHPVDPVALAIPTYFTIIKRPMDLGTIMGKLKNFDYQ 572
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
+EF DV+ F N +N G VY + L + F ++ K
Sbjct: 573 SAKEFQGDVKQVFKNCFKFNQPGQPVYENGQELESIFRNLWSK 615
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDI-IKKPMDLGTVRSKLENNV 235
T + +R ++L + K K G F V + L D + + +K PMD+G + L +N
Sbjct: 309 TSHQIREFRKVLAGVKKTKHGGHFKDAVVKMWPSLADSYILRVKNPMDIGELERNLRDNK 368
Query: 236 YKCPQEFAEDVRLTFNNALVYN 257
Y ++F +D+ L + N+ +N
Sbjct: 369 YSSLRKFKDDLGLIYKNSCTFN 390
>gi|417406586|gb|JAA49943.1| Hypothetical protein [Desmodus rotundus]
Length = 1541
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDL 224
KR++ + + S N ++C E++ + + + F PVD+V DY DII PMD
Sbjct: 1305 KRSSKASNCVES--NWKKQCKELVNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDF 1360
Query: 225 GTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
GTVR LE Y P EF +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1361 GTVRETLEAENYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1419
>gi|195132205|ref|XP_002010534.1| GI14627 [Drosophila mojavensis]
gi|193908984|gb|EDW07851.1| GI14627 [Drosophila mojavensis]
Length = 3232
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD +L + DY +I+KKPMDLGT+RS + N Y P E+ +DV L F+NA +YN K
Sbjct: 1698 FRYPVDPQALAIPDYFEIVKKPMDLGTIRSNILNGKYSDPWEYVDDVWLMFDNAWLYNRK 1757
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM--ALGRSLEELP-- 315
VY LS FEQ + + LG R+ + ++ G+ L +P
Sbjct: 1758 TSRVYRYCTKLSEVFEQEIDPVMQ------ALGYCCGRKYTFNPQVLCCYGKQLCTIPRD 1811
Query: 316 ------QEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDND-TLSQLVRFVDNFKKA 368
Q L K G+ R + C D I+ D L D SQ D FK+
Sbjct: 1812 AKYYSYQNSL-KEYGVASNRYT--FCQKCFND-IQGDTVTLGEDPQQSQTQIKKDQFKEM 1867
Query: 369 EKDKTEKEPM 378
+ D E EP
Sbjct: 1868 KNDHLELEPF 1877
>gi|440901439|gb|ELR52381.1| CREB-binding protein [Bos grunniens mutus]
Length = 2293
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 173 SLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE 232
+L ST A+ R +D + F PVD L + DY DI+K PMDL T++ KL+
Sbjct: 1092 ALMSTLEALYR---------QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLD 1142
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG 292
Y+ P ++ +DV L FNNA +YN K VY L+ FE Q++ Q G
Sbjct: 1143 TGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC 1199
Query: 293 RGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDN 352
G+ E S + G+ L +P++ +N + C + ++ D+
Sbjct: 1200 -GRKYEFSPQTLCCYGKQLCTIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDD 1253
Query: 353 DTLSQLVRFVDNFKKAEKDKTEKEPM 378
+ Q D F+K + D + EP
Sbjct: 1254 PSQPQTTISKDQFEKKKNDTLDPEPF 1279
>gi|432111554|gb|ELK34668.1| CREB-binding protein [Myotis davidii]
Length = 2283
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 989 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1048
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1049 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1104
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1105 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1159
Query: 373 TEKEPM 378
+ EP
Sbjct: 1160 LDPEPF 1165
>gi|255683523|ref|NP_001157494.1| CREB-binding protein [Bos taurus]
gi|296473434|tpg|DAA15549.1| TPA: CREB binding protein [Bos taurus]
Length = 2435
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 173 SLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE 232
+L ST A+ R +D + F PVD L + DY DI+K PMDL T++ KL+
Sbjct: 1096 ALMSTLEALYR---------QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLD 1146
Query: 233 NNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILG 292
Y+ P ++ +DV L FNNA +YN K VY L+ FE Q++ Q G
Sbjct: 1147 TGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC 1203
Query: 293 RGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDN 352
G+ E S + G+ L +P++ +N + C + ++ D+
Sbjct: 1204 -GRKYEFSPQTLCCYGKQLCTIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDD 1257
Query: 353 DTLSQLVRFVDNFKKAEKDKTEKEPM 378
+ Q D F+K + D + EP
Sbjct: 1258 PSQPQTTISKDQFEKKKNDTLDPEPF 1283
>gi|67480061|ref|XP_655396.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56472529|gb|EAL50010.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449706339|gb|EMD46207.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 557
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C IL +M +++ F T VD ++L + DY+ I+K PMDL TV KL +YK ++F
Sbjct: 322 CSSILGAIMNNQESEPFKTEVDPIALNILDYYKIVKHPMDLETVSIKLSKGLYKTKEDFK 381
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
+D++L F NA +YN + ++ A L KF++MF
Sbjct: 382 KDMKLIFENAKIYNSSENSIHQSAINLMKKFDKMF 416
>gi|397488302|ref|XP_003815207.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein [Pan paniscus]
Length = 2503
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1165 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1224
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1225 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1280
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1281 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1335
Query: 373 TEKEPM 378
+ EP
Sbjct: 1336 LDPEPF 1341
>gi|296421346|ref|XP_002840226.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636440|emb|CAZ84417.1| unnamed protein product [Tuber melanosporum]
Length = 825
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 158 PFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDK---QGWAFNTPVDVVSLRLRDY 214
P+ + K +R A + +R C +L +L K + + F PVD V+L + DY
Sbjct: 446 PYSDVKPRRKKAASE--------LRFCDIVLKELHKKQYHDTAFPFYVPVDPVALNIPDY 497
Query: 215 HDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
IIKKPMDL T+ +KL+ N Y +F D+RL F+N +NP +V+ + L F
Sbjct: 498 FKIIKKPMDLSTISTKLKTNQYDSASDFEADIRLMFSNCYKFNPSDQHVHKCGKALENIF 557
Query: 275 EQMF 278
+Q +
Sbjct: 558 DQKW 561
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 171 TXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSK 230
T LT+T+ ++ ++ L + K F PVD + L + +Y ++I PMDL T+ K
Sbjct: 238 TAPLTATQ--IKYLLVVIRSLRRTKDARPFTMPVDPIKLNVPNYFEVITNPMDLQTMEKK 295
Query: 231 LENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
L N Y ++F D L N + +N + H V + A FE+
Sbjct: 296 LNNKEYSSSRDFLADFNLILTNCVTFNGREHPVSENGRVMKAVFEK 341
>gi|386781589|ref|NP_001247644.1| CREB-binding protein [Macaca mulatta]
gi|384945388|gb|AFI36299.1| CREB-binding protein isoform a [Macaca mulatta]
Length = 2442
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1104 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1163
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1164 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1219
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1220 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1274
Query: 373 TEKEPM 378
+ EP
Sbjct: 1275 LDPEPF 1280
>gi|121707746|ref|XP_001271928.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
gi|119400076|gb|EAW10502.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
Length = 840
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 181 MRRCGEILTKLMKDK-QGWA--FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C E+L +L K K WA F PVD V+L + YH IIKKPMDL TV+SKL+ Y+
Sbjct: 483 LRFCQEVLDELHKPKFYTWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYE 542
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
+EF DVR F N +N G Y + +F+++F+ Q+ R
Sbjct: 543 NAKEFEVDVRQIFKNCFKFNIPGDPTYMAGQ----RFQEIFENKWAQKSR 588
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 164 AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMD 223
AK + G ++T ++ G K M D + F PVD + + + Y IIK PMD
Sbjct: 274 AKLVSNGEAAMTKVQHKFLLKGIQSLKRMNDAR--FFREPVDPIKMNIPHYPQIIKHPMD 331
Query: 224 LGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
LGT+ KL+NN YK Q D L NA+ +N H V L FE+ L K
Sbjct: 332 LGTIERKLKNNEYKAAQAVVNDFHLMVQNAVTFNGPDHLVSQEGMKLQGTFEKQMVNLPK 391
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 295 KAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDND 353
K R ++ EK + + LP +++ + L I++ S +L EIELDI+ L ND
Sbjct: 690 KQRYVTYHEKQIISNGISSLPDKKMQEALKIIQ---SNVPALKGTQETEIELDIDELPND 746
Query: 354 TLSQLVRFV 362
L L++FV
Sbjct: 747 VLLMLLKFV 755
>gi|255947958|ref|XP_002564746.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591763|emb|CAP98009.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 812
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 181 MRRCGEILTKLMKDKQ-GWA--FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C E+L +L K K W F PVD V+L + YH +IKKPMDL TV+SKL+ Y+
Sbjct: 464 LRFCQEVLDELHKQKHYNWVMPFYYPVDPVALNIPSYHSVIKKPMDLSTVQSKLKTGQYE 523
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
+EF DVRL F N +N G Y E + E++F
Sbjct: 524 NAKEFESDVRLIFKNCYRFNIPGDPTYVCGE----RAEEIF 560
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
TK + + LT L + + PVD V L + YH +I +PMDLGT+ KL+NN Y
Sbjct: 270 TKMQHKFISKSLTSLKRMHDARFYKEPVDAVKLNIPQYHTVITQPMDLGTMERKLKNNQY 329
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
PQ A+D L NN ++N H V L A F++ L
Sbjct: 330 SSPQAVADDFALMVNNTTIFNGPDHLVTQEGIKLKATFDKQMTNL 374
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 279 QKLS--KQQQRQGILGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL 336
+KLS K+ ++ + GK R ++ EK + + LP + + + L I+ +N+
Sbjct: 645 KKLSSGKRDKKSKVSQPGKTRAVTYNEKQIISNGISSLPDKRMQQALQII--QNNVPQLK 702
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFV 362
EIELDI+ L ND L +L+ FV
Sbjct: 703 GTDEAEIELDIDELPNDVLLKLLNFV 728
>gi|114660667|ref|XP_523285.2| PREDICTED: CREB-binding protein isoform 2 [Pan troglodytes]
gi|410211516|gb|JAA02977.1| CREB binding protein [Pan troglodytes]
gi|410264672|gb|JAA20302.1| CREB binding protein [Pan troglodytes]
gi|410354229|gb|JAA43718.1| CREB binding protein [Pan troglodytes]
Length = 2442
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1104 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1163
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1164 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1219
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1220 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1274
Query: 373 TEKEPM 378
+ EP
Sbjct: 1275 LDPEPF 1280
>gi|296219458|ref|XP_002807445.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein [Callithrix
jacchus]
Length = 2440
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1095 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1154
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1155 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1210
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1211 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1265
Query: 373 TEKEPM 378
+ EP
Sbjct: 1266 LDPEPF 1271
>gi|426381002|ref|XP_004057146.1| PREDICTED: CREB-binding protein isoform 1 [Gorilla gorilla gorilla]
Length = 2522
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1190 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1249
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1250 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1305
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1306 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1360
Query: 373 TEKEPM 378
+ EP
Sbjct: 1361 LDPEPF 1366
>gi|119943104|ref|NP_004371.2| CREB-binding protein isoform a [Homo sapiens]
gi|116241283|sp|Q92793.3|CBP_HUMAN RecName: Full=CREB-binding protein
gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens]
gi|119605741|gb|EAW85335.1| CREB binding protein (Rubinstein-Taybi syndrome), isoform CRA_b [Homo
sapiens]
gi|119605742|gb|EAW85336.1| CREB binding protein (Rubinstein-Taybi syndrome), isoform CRA_b [Homo
sapiens]
gi|119605743|gb|EAW85337.1| CREB binding protein (Rubinstein-Taybi syndrome), isoform CRA_b [Homo
sapiens]
gi|261858188|dbj|BAI45616.1| CREB binding protein [synthetic construct]
Length = 2442
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1104 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1163
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1164 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1219
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1220 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1274
Query: 373 TEKEPM 378
+ EP
Sbjct: 1275 LDPEPF 1280
>gi|2443859|gb|AAC51770.1| CREB-binding protein [Homo sapiens]
Length = 2442
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1104 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1163
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1164 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1219
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1220 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1274
Query: 373 TEKEPM 378
+ EP
Sbjct: 1275 LDPEPF 1280
>gi|410297684|gb|JAA27442.1| CREB binding protein [Pan troglodytes]
Length = 2442
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1104 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1163
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1164 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1219
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1220 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1274
Query: 373 TEKEPM 378
+ EP
Sbjct: 1275 LDPEPF 1280
>gi|440789954|gb|ELR11245.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 119
Score = 81.6 bits (200), Expect = 8e-13, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 58/96 (60%)
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAED 245
E+LT L + + W F PVD V+L + DY II++PMDL T+R KLE Y+ F +D
Sbjct: 8 ELLTNLARHRYAWPFAHPVDYVALGVPDYPMIIQRPMDLATIRDKLEAGTYELVSAFLDD 67
Query: 246 VRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
V+L ++NA VYNP G V MA+ + + ++ L
Sbjct: 68 VQLVWSNAKVYNPPGSDVVIMADAMEQETRRLAASL 103
>gi|49117594|gb|AAH72594.1| Crebbp protein, partial [Mus musculus]
Length = 1589
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1105 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1164
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1165 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1220
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1221 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1275
Query: 373 TEKEPM 378
+ EP
Sbjct: 1276 LDPEPF 1281
>gi|417407390|gb|JAA50306.1| Putative histone acetylation protein, partial [Desmodus rotundus]
Length = 2307
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1075 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1134
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1135 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1190
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1191 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1245
Query: 373 TEKEPM 378
+ EP
Sbjct: 1246 LDPEPF 1251
>gi|403273430|ref|XP_003928519.1| PREDICTED: CREB-binding protein isoform 1 [Saimiri boliviensis
boliviensis]
Length = 2448
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1104 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1163
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1164 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1219
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1220 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1274
Query: 373 TEKEPM 378
+ EP
Sbjct: 1275 LDPEPF 1280
>gi|348538798|ref|XP_003456877.1| PREDICTED: bromodomain and WD repeat-containing protein 3
[Oreochromis niloticus]
Length = 1753
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 87/186 (46%), Gaps = 26/186 (13%)
Query: 95 SDYVTFNLGAYTRRELKDLRKRLVSDLERVRNLGSRIANSDFQATHAYPTTKSQNRGG-- 152
+D + +G + ++ DL ++L S++ +G D P T + +RGG
Sbjct: 1237 TDVLLHYIGDQSCIDILDLYRKLKSEVSSEAEVGV-----DLDVDSDTPGTSTGHRGGTA 1291
Query: 153 -SKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRL 211
SK+ +PKA R +C E+L ++ F PVD+
Sbjct: 1292 NSKKRGVVLDPKAWRG---------------QCRELLRRMTASMDSEPFRQPVDL--FEY 1334
Query: 212 RDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNP-KGHYVYAMAETL 270
DY DII PMDLGTV L Y+ P EFA+D+RL F+N+ Y P K +Y M +L
Sbjct: 1335 PDYRDIIDTPMDLGTVSETLAVGNYENPMEFAKDIRLIFSNSKAYTPNKKSQIYTMTLSL 1394
Query: 271 SAKFEQ 276
SA FE+
Sbjct: 1395 SAFFEK 1400
>gi|67483926|ref|XP_657183.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56474427|gb|EAL51797.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449704936|gb|EMD45090.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 485
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 94/218 (43%), Gaps = 50/218 (22%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C +IL L + F TPVD ++ L DY+ +I PMDL T+ K +Y+ +FA
Sbjct: 275 CRQILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKFRYGIYEHIDDFA 334
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF------------------------- 278
DVRL F NA+ YNP + ++ A TL F+
Sbjct: 335 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQIKEIYDCRRSIKVIFNQDEHNYWNDQ 394
Query: 279 -------QKLSKQQQRQGILGRGKARE----MSLEEKMALGRSLEEL---PQEELGKLLG 324
Q + + ++ QGIL E +S EEK+ L + LEE+ QEE+ K L
Sbjct: 395 REWMDFKQSIEELKEEQGILPLKMEEERVIPLSFEEKIELSKRLEEVEGAKQEEVLKYLK 454
Query: 325 IVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
I K + G EIE+ E L+ L L + V
Sbjct: 455 IDK--DEG---------EIEIKFETLNEQDLIMLNKIV 481
>gi|291225093|ref|XP_002732536.1| PREDICTED: bromodomain adjacent to zinc finger domain, 1B-like
[Saccoglossus kowalevskii]
Length = 1438
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N ++ C +IL KL + K W F PV+ V DY+DII PMD T+++K YK
Sbjct: 1293 NDLKACEDILNKLTRHKDSWPFRKPVEKVEAP--DYYDIISDPMDFQTMKNKCLCIEYKS 1350
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
F ED++L FNNA +YN G V E+L F ++ +K
Sbjct: 1351 VDAFMEDIKLVFNNAEIYNKTGSEVLQCQESLEEHFAELVEKF 1393
>gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus]
gi|19547887|gb|AAL87532.1| CREB-binding protein [Mus musculus]
Length = 2429
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1099 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1158
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1159 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1214
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1215 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1269
Query: 373 TEKEPM 378
+ EP
Sbjct: 1270 LDPEPF 1275
>gi|414886862|tpg|DAA62876.1| TPA: hypothetical protein ZEAMMB73_999770 [Zea mays]
Length = 1278
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 151 GGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLR 210
GG R++P P+ KR + + T+ + IL KL K F PVD
Sbjct: 186 GGGGRSDPTSAPRTKRPSVPGTARTTPLPDQKALEMILEKLQKKDTYGVFAEPVD--PEE 243
Query: 211 LRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETL 270
L DYHD+I+ PMD GTVR KL N Y+ ++F +DV L +NA+ YN + A ++
Sbjct: 244 LPDYHDVIEHPMDFGTVRKKLARNAYRSFEQFEDDVFLICSNAMQYNAPDTIYFRQAHSI 303
Query: 271 SAKFEQMFQKL 281
+ FQ+L
Sbjct: 304 QELARKKFQEL 314
>gi|290560930|ref|NP_596872.3| CREB-binding protein [Rattus norvegicus]
Length = 2444
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1105 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1164
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1165 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1220
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1221 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1275
Query: 373 TEKEPM 378
+ EP
Sbjct: 1276 LDPEPF 1281
>gi|431906599|gb|ELK10720.1| CREB-binding protein [Pteropus alecto]
Length = 2323
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1090 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1149
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1150 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1205
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1206 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1260
Query: 373 TEKEPM 378
+ EP
Sbjct: 1261 LDPEPF 1266
>gi|395835841|ref|XP_003790880.1| PREDICTED: CREB-binding protein [Otolemur garnettii]
Length = 2439
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1105 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1164
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1165 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1220
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1221 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1275
Query: 373 TEKEPM 378
+ EP
Sbjct: 1276 LDPEPF 1281
>gi|426255095|ref|XP_004021200.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein [Ovis aries]
Length = 2338
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1101 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1160
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1161 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1216
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1217 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1271
Query: 373 TEKEPM 378
+ EP
Sbjct: 1272 LDPEPF 1277
>gi|297697969|ref|XP_002826106.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein [Pongo abelii]
Length = 2442
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1107 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1166
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1167 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1222
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1223 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1277
Query: 373 TEKEPM 378
+ EP
Sbjct: 1278 LDPEPF 1283
>gi|440293462|gb|ELP86579.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 275
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
++ + +C +I KLM +G AFNTPVD V+LR+ Y +IK PMDLGT++ KL + Y
Sbjct: 2 SQQELVKCKDINRKLMSQDEGVAFNTPVDPVALRVPTYPTVIKYPMDLGTIKRKLGDKKY 61
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EF DV LTF +A+ +N V+ A K E +F KL
Sbjct: 62 TTKDEFYMDVILTFQDAIYFNHPESEVHHWA----VKLEGLFLKL 102
>gi|159125309|gb|EDP50426.1| transcription regulator BDF1, putative [Aspergillus fumigatus
A1163]
Length = 832
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 181 MRRCGEILTKLMKDKQ-GWA--FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C E+L +L K K WA F PVD V+L + YH IIKKPMDL TV+SKL+ Y+
Sbjct: 478 LRFCQEVLDELHKPKHYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYE 537
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
+EF D+R F N +N G Y + +F+++F+ Q+ R
Sbjct: 538 NAKEFEVDMRQIFKNCFKFNIPGDPTYMAGQ----RFQEIFENKWAQKTR 583
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 164 AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMD 223
A+ G ++T ++ G K M D + + PVD + + + Y IIK PMD
Sbjct: 270 ARTTVNGEATMTKVQHKFVLKGIQSLKRMNDAR--FYREPVDPIKMNIPHYPQIIKHPMD 327
Query: 224 LGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
LGT+ KL+NN YK Q +D L NA+ +N H V L FE+ L K
Sbjct: 328 LGTIERKLKNNEYKTAQAVVDDFNLMVQNAVTFNGPDHLVSQEGLKLKGTFEKQMMNLPK 387
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTL 355
R ++ EK + + LP +++ + L I++ S +L EIELDI+ L N+ L
Sbjct: 685 RYVTYHEKQIISNGISSLPDKKMQEALKIIQ---SNVPALKGTQETEIELDIDELPNEVL 741
Query: 356 SQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAP 389
L++FV KK E+E M + A +AAP
Sbjct: 742 LMLLKFV---KKNAPHVIEEEDMTASTAANMAAP 772
>gi|403273432|ref|XP_003928520.1| PREDICTED: CREB-binding protein isoform 2 [Saimiri boliviensis
boliviensis]
Length = 2410
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1066 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1125
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1126 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1181
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1182 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1236
Query: 373 TEKEPM 378
+ EP
Sbjct: 1237 LDPEPF 1242
>gi|300176102|emb|CBK23413.2| unnamed protein product [Blastocystis hominis]
Length = 697
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 165 KRAAAGTXSLTSTKNAMRRCGEILTKLM--KDKQGWAFNTPVDVVSLRLRDYHDIIKKPM 222
K+ S T+N ++ LM KD G FNTPVD L Y+ IIKKPM
Sbjct: 3 KQEIINYVSFLKTRNLQAYFAPLIQLLMQHKDNHG-IFNTPVDPDVQNLPTYYSIIKKPM 61
Query: 223 DLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
DLGTVR +L + Y E +D+ L F NA +NP H++Y A +LS FE
Sbjct: 62 DLGTVRDRLASGYYTSQSEIMDDISLVFRNAQKFNPAPHFIYLCASSLSKVFE 114
>gi|81911066|sp|Q6JHU9.1|CBP_RAT RecName: Full=CREB-binding protein
gi|38505359|gb|AAR23149.1| CREB-binding protein [Rattus norvegicus]
Length = 2442
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1105 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1164
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1165 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1220
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1221 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1275
Query: 373 TEKEPM 378
+ EP
Sbjct: 1276 LDPEPF 1281
>gi|68533141|dbj|BAE06125.1| CREBBP variant protein [Homo sapiens]
Length = 2472
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1134 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1193
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1194 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1249
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1250 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1304
Query: 373 TEKEPM 378
+ EP
Sbjct: 1305 LDPEPF 1310
>gi|332240178|ref|XP_003269267.1| PREDICTED: CREB-binding protein [Nomascus leucogenys]
Length = 2442
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1104 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1163
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1164 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1219
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1220 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1274
Query: 373 TEKEPM 378
+ EP
Sbjct: 1275 LDPEPF 1280
>gi|281208106|gb|EFA82284.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
Length = 800
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 63/101 (62%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
K + C I +++ + K F+ VD ++L + Y D+IK PMDL ++SKL+ +YK
Sbjct: 521 KKNLEICKNINSQIHRKKMAEIFHFAVDPIALNIPHYFDVIKHPMDLSLIQSKLDGGLYK 580
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
++FA D+RL F+NA+++N +G +Y + L A+F +++
Sbjct: 581 SIKDFAADMRLMFDNAMLFNEEGSLIYRNTKKLMAEFNKIY 621
>gi|119500410|ref|XP_001266962.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
181]
gi|119415127|gb|EAW25065.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
181]
Length = 833
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 181 MRRCGEILTKLMKDKQ-GWA--FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C E+L +L K K WA F PVD V+L + YH IIKKPMDL TV+SKL+ Y+
Sbjct: 479 LRFCQEVLDELHKPKHYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYE 538
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
+EF D+R F N +N G Y + +F+++F+ Q+ R
Sbjct: 539 NAKEFEVDMRQIFKNCFKFNIPGDPTYMAGQ----RFQEIFENKWAQKTR 584
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 164 AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMD 223
A+ G ++T ++ G K M D + + PVD V + + Y IIK PMD
Sbjct: 271 ARTTVNGEATMTKVQHKFVLKGIQSLKRMNDAR--FYREPVDPVKMNIPHYPQIIKHPMD 328
Query: 224 LGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
LGT+ KL+N YK Q +D L NA+ +N H V L FE+ L K
Sbjct: 329 LGTIERKLKNTEYKTAQAVVDDFNLMVQNAVTFNGPDHVVSQEGLKLKGTFEKQMMNLPK 388
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTL 355
R ++ EK + + LP +++ + L I++ S +L EIELDI+ L N+ L
Sbjct: 686 RYVTYHEKQIISNGISSLPDKKMQEALKIIQ---SNVPALKGTQETEIELDIDELPNEVL 742
Query: 356 SQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAP 389
L++FV KK E+E M + A +AAP
Sbjct: 743 LMLLKFV---KKNAPHVIEEEDMTASTAANMAAP 773
>gi|426381004|ref|XP_004057147.1| PREDICTED: CREB-binding protein isoform 2 [Gorilla gorilla gorilla]
Length = 2398
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1066 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1125
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1126 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1181
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1182 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1236
Query: 373 TEKEPM 378
+ EP
Sbjct: 1237 LDPEPF 1242
>gi|70993850|ref|XP_751772.1| transcription regulator BDF1 [Aspergillus fumigatus Af293]
gi|66849406|gb|EAL89734.1| transcription regulator BDF1, putative [Aspergillus fumigatus
Af293]
Length = 832
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 181 MRRCGEILTKLMKDKQ-GWA--FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C E+L +L K K WA F PVD V+L + YH IIKKPMDL TV+SKL+ Y+
Sbjct: 478 LRFCQEVLDELHKPKHYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYE 537
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
+EF D+R F N +N G Y + +F+++F+ Q+ R
Sbjct: 538 NAKEFEVDMRQIFKNCFKFNIPGDPTYMAGQ----RFQEIFENKWAQKTR 583
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 164 AKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMD 223
A+ G ++T ++ G K M D + + PVD + + + Y IIK PMD
Sbjct: 270 ARTTVNGEATMTKVQHKFVLKGIQSLKRMNDAR--FYREPVDPIKMNIPHYPQIIKHPMD 327
Query: 224 LGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSK 283
LGT+ KL+NN YK Q +D L NA+ +N H V L FE+ L K
Sbjct: 328 LGTIERKLKNNEYKTAQAVVDDFNLMVQNAVTFNGPDHLVSQEGLKLKGTFEKQMMNLPK 387
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 297 REMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTL 355
R ++ EK + + LP +++ + L I++ S +L EIELDI+ L N+ L
Sbjct: 685 RYVTYHEKQIISNGISSLPDKKMQEALKIIQ---SNVPALKGTQETEIELDIDELPNEVL 741
Query: 356 SQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAAP 389
L++FV KK E+E M + A +AAP
Sbjct: 742 LMLLKFV---KKNAPHVIEEEDMTASTAANMAAP 772
>gi|349580096|dbj|GAA25257.1| K7_Bdf1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 686
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
PK+KR + AM+ C +L +LM K + F PVD VS+ L Y D +
Sbjct: 309 PKSKR----------LQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYV 358
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
K+PMDLGT+ KL + Y+ ++F DVRL F N +NP G V M L F
Sbjct: 359 KEPMDLGTIAKKLNDWQYQTMEDFGRDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y + IK+PMDL T+ KL Y+ P++ ED L NN++
Sbjct: 168 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSI 227
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 228 KFNGPNAGISQMARNIQASFEK 249
>gi|195392602|ref|XP_002054946.1| GJ19060 [Drosophila virilis]
gi|194149456|gb|EDW65147.1| GJ19060 [Drosophila virilis]
Length = 3142
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 200 FNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPK 259
F PVD +L + DY +I+KKPMDLGT+R+ + N Y P E+ +DV L F+NA +YN K
Sbjct: 1623 FRYPVDPQALGIPDYFEIVKKPMDLGTIRNNILNGKYSDPWEYVDDVWLMFDNAWLYNRK 1682
Query: 260 GHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM--ALGRSLEELP-- 315
VY LS FE + + LG R+ + ++ G+ L +P
Sbjct: 1683 TSRVYRYCTKLSEVFEAEIDPVMQ------ALGYCCGRKYTFNPQVLCCYGKQLCTIPRD 1736
Query: 316 ------QEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL-SQLVRFVDNFKKA 368
Q L K G+ R + C D I+ D L +D L SQ D FK+
Sbjct: 1737 AKYYSYQNSL-KEYGVASNRYT--FCQKCFND-IQGDTVTLGDDPLQSQTQIKKDQFKEM 1792
Query: 369 EKDKTEKEPM 378
+ D E EP
Sbjct: 1793 KNDHLELEPF 1802
>gi|70995311|ref|NP_001020603.1| CREB-binding protein [Mus musculus]
gi|225001036|gb|AAI72737.1| CREB binding protein [synthetic construct]
Length = 2441
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1105 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1164
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1165 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1220
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1221 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1275
Query: 373 TEKEPM 378
+ EP
Sbjct: 1276 LDPEPF 1281
>gi|410985453|ref|XP_003999037.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein [Felis catus]
Length = 2362
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1097 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1156
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1157 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1212
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1213 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1267
Query: 373 TEKEPM 378
+ EP
Sbjct: 1268 LDPEPF 1273
>gi|395518502|ref|XP_003763399.1| PREDICTED: bromodomain and WD repeat-containing protein 1-like
[Sarcophilus harrisii]
Length = 2276
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N R+C E++ + + + F PVD+V DY DII PMD GTV+ LE Y
Sbjct: 1311 NWQRQCKELVNLIFQCEDSEPFRHPVDLVEYP--DYRDIIDTPMDFGTVKETLEAGNYDN 1368
Query: 239 PQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
P EF +D+RL F+NA Y P K +Y+M LSA FE+ +++S
Sbjct: 1369 PLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKIRRIS 1413
>gi|332845217|ref|XP_003315002.1| PREDICTED: CREB-binding protein isoform 1 [Pan troglodytes]
gi|410264670|gb|JAA20301.1| CREB binding protein [Pan troglodytes]
Length = 2404
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1066 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1125
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1126 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1181
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1182 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1236
Query: 373 TEKEPM 378
+ EP
Sbjct: 1237 LDPEPF 1242
>gi|341940549|sp|P45481.3|CBP_MOUSE RecName: Full=CREB-binding protein
Length = 2441
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1105 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1164
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1165 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1220
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1221 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1275
Query: 373 TEKEPM 378
+ EP
Sbjct: 1276 LDPEPF 1281
>gi|345802361|ref|XP_003434912.1| PREDICTED: CREB-binding protein [Canis lupus familiaris]
Length = 2442
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1107 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1166
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1167 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1222
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1223 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1277
Query: 373 TEKEPM 378
+ EP
Sbjct: 1278 LDPEPF 1283
>gi|119943102|ref|NP_001073315.1| CREB-binding protein isoform b [Homo sapiens]
Length = 2404
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1066 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1125
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1126 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1181
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1182 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1236
Query: 373 TEKEPM 378
+ EP
Sbjct: 1237 LDPEPF 1242
>gi|417414111|gb|JAA53356.1| Putative histone acetylation protein, partial [Desmodus rotundus]
Length = 2406
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1074 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1133
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1134 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1189
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1190 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1244
Query: 373 TEKEPM 378
+ EP
Sbjct: 1245 LDPEPF 1250
>gi|255071051|ref|XP_002507607.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226522882|gb|ACO68865.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 433
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 186 EILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ----- 240
+IL KLM ++ W FN PVD ++DY+++IK PMD GT+ +K + Y
Sbjct: 150 KILRKLMNNRLSWPFNEPVDAEYWGVQDYYEVIKTPMDFGTIATKYDIGDYNTENSGHGA 209
Query: 241 -EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREM 299
+F DVR F NA YN GH VY A+ L+ FE K + G+L G M
Sbjct: 210 LKFVTDVRQVFYNAWTYNQPGHQVYQYAQILARIFETELSKSVGIDDKWGLLS-GSTMGM 268
Query: 300 SLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQ 357
+L + + + ++ + I +++ +GSL+ + D +I+ +D SQ
Sbjct: 269 TLGNQEKIDKENADMNS------VKIAEEKGFADGSLNKNEDMRRGEIKTAQDDVRSQ 320
>gi|407044057|gb|EKE42339.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 485
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 94/218 (43%), Gaps = 50/218 (22%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C +IL L + F TPVD ++ L DY+ +I PMDL T+ K +Y+ +FA
Sbjct: 275 CRQILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKFRYGIYEHIDDFA 334
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF------------------------- 278
DVRL F NA+ YNP + ++ A TL F+
Sbjct: 335 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQIKEIYDCRRSIKVIFNQDEHNYWNDQ 394
Query: 279 -------QKLSKQQQRQGILGRGKARE----MSLEEKMALGRSLEEL---PQEELGKLLG 324
Q + + ++ QGIL E +S EEK+ L + LEE+ QEE+ K L
Sbjct: 395 REWMDFKQSIEELKEEQGILPLKMEEERVIPLSFEEKIELSKRLEEVEGAKQEEVLKYLK 454
Query: 325 IVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFV 362
I K + G EIE+ E L+ L L + V
Sbjct: 455 IDK--DEG---------EIEIKFETLNEQDLIMLNKIV 481
>gi|190405078|gb|EDV08345.1| hypothetical protein SCRG_00567 [Saccharomyces cerevisiae RM11-1a]
Length = 643
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 75/253 (29%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
R C +IL LM K + F PVD ++L L +Y D++K PMDLGT+ + L N YK
Sbjct: 328 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 387
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF----------------------- 274
+F +D+ L F N +NP+G+ V++M + L F
Sbjct: 388 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEED 447
Query: 275 ---------------------------EQMFQKLSKQQQRQGILGRGKAREMSLEEKMA- 306
+ + QKL K + L R + ++S E K
Sbjct: 448 NYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVELQQLKRQELSKLSKERKRKH 507
Query: 307 LGRSL---------------------EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIEL 345
LG++L EL E+ ++ I+K + L+ + DEIE+
Sbjct: 508 LGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEI 567
Query: 346 DIEALDNDTLSQL 358
D++ LD T++++
Sbjct: 568 DLDILDEATIARI 580
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
TK +KD + F PVD ++L + Y + ++ PMDL + +KL+ NVY ++ D +
Sbjct: 154 TKRLKDAR--PFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKT 211
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQ 276
+N L +N + +MA+ + FE+
Sbjct: 212 MVDNCLNFNGPESSISSMAKRIQKYFEK 239
>gi|6320132|ref|NP_010213.1| Bdf2p [Saccharomyces cerevisiae S288c]
gi|74583636|sp|Q07442.1|BDF2_YEAST RecName: Full=Bromodomain-containing factor 2
gi|1431082|emb|CAA98636.1| BDF2 [Saccharomyces cerevisiae]
gi|285810964|tpg|DAA11788.1| TPA: Bdf2p [Saccharomyces cerevisiae S288c]
gi|392300048|gb|EIW11139.1| Bdf2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 638
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 75/253 (29%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
R C +IL LM K + F PVD ++L L +Y D++K PMDLGT+ + L N YK
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF----------------------- 274
+F +D+ L F N +NP+G+ V++M + L F
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEED 442
Query: 275 ---------------------------EQMFQKLSKQQQRQGILGRGKAREMSLEEKMA- 306
+ + QKL K + L R + ++S E K
Sbjct: 443 NYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVELQQLKRQELSKLSKERKRKH 502
Query: 307 LGRSL---------------------EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIEL 345
LG++L EL E+ ++ I+K + L+ + DEIE+
Sbjct: 503 LGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEI 562
Query: 346 DIEALDNDTLSQL 358
D++ LD T++++
Sbjct: 563 DLDILDEATIARI 575
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
TK +KD + F PVD ++L + Y + ++ PMDL + +KL+ NVY ++ D +
Sbjct: 149 TKRLKDAR--PFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKT 206
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQ 276
+N L +N + +MA+ + FE+
Sbjct: 207 MVDNCLNFNGPESSISSMAKRIQKYFEK 234
>gi|259145174|emb|CAY78438.1| Bdf2p [Saccharomyces cerevisiae EC1118]
Length = 638
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 75/253 (29%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
R C +IL LM K + F PVD ++L L +Y D++K PMDLGT+ + L N YK
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF----------------------- 274
+F +D+ L F N +NP+G+ V++M + L F
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEED 442
Query: 275 ---------------------------EQMFQKLSKQQQRQGILGRGKAREMSLEEKMA- 306
+ + QKL K + L R + ++S E K
Sbjct: 443 NYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVELQQLKRQELSKLSKERKRKH 502
Query: 307 LGRSL---------------------EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIEL 345
LG++L EL E+ ++ I+K + L+ + DEIE+
Sbjct: 503 LGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEI 562
Query: 346 DIEALDNDTLSQL 358
D++ LD T++++
Sbjct: 563 DLDILDEATIARI 575
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
TK +KD + F PVD ++L + Y + ++ PMDL + +KL+ NVY ++ D +
Sbjct: 149 TKRLKDAR--PFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKT 206
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQ 276
+N L +N + +MA+ + FE+
Sbjct: 207 MVDNCLNFNGPESSISSMAKRIQKYFEK 234
>gi|255072301|ref|XP_002499825.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226515087|gb|ACO61083.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 675
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 89/197 (45%), Gaps = 22/197 (11%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL-ENNVYKCPQ 240
R+C L +LM K FN PVD V+L L Y +I+K+PMDLGTV + + + VY C +
Sbjct: 290 RQCLAALKQLMAHKWAHPFNKPVDHVALNLPTYPEIVKRPMDLGTVEANIRKGGVYACAE 349
Query: 241 EFAEDVRLTFNNALVYNPKGHY-VYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREM 299
E DV L F+NA + PK V+ MA L + Q + ++ R
Sbjct: 350 EVHADVSLVFSNAKTFTPKPEMDVHVMAVALEEFWAQRWAAVAD-------------RAK 396
Query: 300 SLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLV 359
+EE M + + E EE+ ++ + + C G ELD D L +
Sbjct: 397 EVEEGMTVEKECAEKKSEEMN------ARKRLASEEMRCAGLMAELDRLRRQLDDLKRQT 450
Query: 360 RFVDN-FKKAEKDKTEK 375
R + AEKD+ +
Sbjct: 451 RSICRPMTTAEKDQLRR 467
>gi|348584000|ref|XP_003477760.1| PREDICTED: CREB-binding protein-like isoform 1 [Cavia porcellus]
Length = 2441
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1108 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1167
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1168 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1223
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1224 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1278
Query: 373 TEKEPM 378
+ EP
Sbjct: 1279 LDPEPF 1284
>gi|345802363|ref|XP_864433.2| PREDICTED: CREB-binding protein isoform 3 [Canis lupus familiaris]
Length = 2404
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1069 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1128
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1129 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1184
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1185 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1239
Query: 373 TEKEPM 378
+ EP
Sbjct: 1240 LDPEPF 1245
>gi|345323444|ref|XP_001510724.2| PREDICTED: bromodomain and WD repeat-containing protein 1
[Ornithorhynchus anatinus]
Length = 2447
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 179 NAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
N ++C E++ + + + F PVD+V DY DII PMD GTVR LE Y
Sbjct: 1273 NWKKQCKELMNLIFQCEDSEPFRQPVDLVEYP--DYRDIIDTPMDFGTVRETLEAGNYDS 1330
Query: 239 PQEFAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
P E +D+RL F+NA Y P K +Y+M LSA FE+ +++S
Sbjct: 1331 PLELCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMRRIS 1375
>gi|338713007|ref|XP_001499399.3| PREDICTED: CREB-binding protein [Equus caballus]
Length = 2440
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1105 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1164
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1165 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1220
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1221 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1275
Query: 373 TEKEPM 378
+ EP
Sbjct: 1276 LDPEPF 1281
>gi|449802362|pdb|4DON|A Chain A, Brd4 Bromodomain 1 Complex With A Fragment
3,4-dihydro-3-methyl-2(1h)- Quinazolinon
Length = 145
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 52/95 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 49 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 108
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
F N +YN G + MAE L F Q +L
Sbjct: 109 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 143
>gi|50553560|ref|XP_504191.1| YALI0E20537p [Yarrowia lipolytica]
gi|49650060|emb|CAG79786.1| YALI0E20537p [Yarrowia lipolytica CLIB122]
Length = 653
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C ++L +L K + F PVD V+L Y IIK+PMDL TV+ K+ NN Y+
Sbjct: 311 LRFCNQVLKELTSKKHEEYSFPFLLPVDPVALNCPSYFKIIKEPMDLSTVQEKMNNNAYE 370
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
EF DVRL F N +NP G V M + L A F++ +
Sbjct: 371 TADEFESDVRLIFKNCYRFNPDGTPVNKMGKRLEAIFDKKW 411
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
K+ ++ L + + K F PVD V L + Y ++IK PMDLGT+ KL N Y
Sbjct: 123 KHQVKYAASSLKAVKRLKDAAPFIHPVDPVKLNIPTYFEVIKHPMDLGTMEKKLNNGEYG 182
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE-QMFQKLS-----KQQQRQGIL 291
++ DV+ +N L +N ++ +MA++L FE MF S + Q+++ L
Sbjct: 183 TKEDMIADVQRIVDNCLTFNGADSFISSMAKSLFTSFERHMFNFPSADAPTEPQKKKKSL 242
Query: 292 GRG 294
G G
Sbjct: 243 GGG 245
>gi|348584002|ref|XP_003477761.1| PREDICTED: CREB-binding protein-like isoform 2 [Cavia porcellus]
Length = 2403
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1070 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1129
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1130 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1185
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1186 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1240
Query: 373 TEKEPM 378
+ EP
Sbjct: 1241 LDPEPF 1246
>gi|440300943|gb|ELP93390.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 1251
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
M +C IL ++K + F T VD + + DY I+K PMDL TVR KL N YK +
Sbjct: 984 MAKCFPILNSIIKLNKSEPFRTAVDPIYYDVLDYFTIVKDPMDLYTVRKKLMNGAYKNRK 1043
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EFA+D+ L F NA+ YN K ++ AE L FE ++ ++
Sbjct: 1044 EFAKDMVLVFENAMNYNEKKTPIHQDAEELLKVFEDLYNRV 1084
>gi|301779085|ref|XP_002924961.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein-like [Ailuropoda
melanoleuca]
Length = 2504
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1203 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1262
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1263 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1318
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1319 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1373
Query: 373 TEKEPM 378
+ EP
Sbjct: 1374 LDPEPF 1379
>gi|449275937|gb|EMC84662.1| CREB-binding protein [Columba livia]
Length = 2202
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 858 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 917
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 918 AWLYNRKTSRVYKFCTKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 973
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 974 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1028
Query: 373 TEKEPM 378
+ EP
Sbjct: 1029 LDPEPF 1034
>gi|207346961|gb|EDZ73294.1| YDL070Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 614
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 75/253 (29%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
R C +IL LM K + F PVD ++L L +Y D++K PMDLGT+ + L N YK
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF----------------------- 274
+F +D+ L F N +NP+G+ V++M + L F
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEED 442
Query: 275 ---------------------------EQMFQKLSKQQQRQGILGRGKAREMSLEEKMA- 306
+ + QKL K + L R + ++S E K
Sbjct: 443 NYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVELQQLKRQELSKLSKERKRKH 502
Query: 307 LGRSL---------------------EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIEL 345
LG++L EL E+ ++ I+K + L+ + DEIE+
Sbjct: 503 LGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEI 562
Query: 346 DIEALDNDTLSQL 358
D++ LD T++++
Sbjct: 563 DLDILDEATIARI 575
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
TK +KD + F PVD ++L + Y + ++ PMDL + +KL+ NVY ++ D +
Sbjct: 149 TKRLKDAR--PFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKT 206
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQ 276
+N L +N + +MA+ + FE+
Sbjct: 207 MVDNCLNFNGPESSISSMAKRIQKYFEK 234
>gi|345319096|ref|XP_003430100.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein-like
[Ornithorhynchus anatinus]
Length = 2416
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1051 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1110
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1111 AWLYNRKTSRVYKFCTKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1166
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1167 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1221
Query: 373 TEKEPM 378
+ EP
Sbjct: 1222 LDPEPF 1227
>gi|323349464|gb|EGA83688.1| Bdf2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 633
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 75/253 (29%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
R C +IL LM K + F PVD ++L L +Y D++K PMDLGT+ + L N YK
Sbjct: 318 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 377
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF----------------------- 274
+F +D+ L F N +NP+G+ V++M + L F
Sbjct: 378 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEED 437
Query: 275 ---------------------------EQMFQKLSKQQQRQGILGRGKAREMSLEEKMA- 306
+ + QKL K + L R + ++S E K
Sbjct: 438 NYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVELQQLKRQELSKLSKERKRKH 497
Query: 307 LGRSL---------------------EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIEL 345
LG++L EL E+ ++ I+K + L+ + DEIE+
Sbjct: 498 LGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEI 557
Query: 346 DIEALDNDTLSQL 358
D++ LD T++++
Sbjct: 558 DLDILDEATIARI 570
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
TK +KD + F PVD ++L + Y + ++ PMDL + +KL+ NVY ++ D +
Sbjct: 144 TKRLKDAR--PFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKT 201
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQ 276
+N L +N + +MA+ + FE+
Sbjct: 202 MVDNCLNFNGPESSISSMAKRIQKYFEK 229
>gi|308810150|ref|XP_003082384.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
gi|116060852|emb|CAL57330.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
Length = 1083
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 183 RCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK-CPQE 241
R I +M +K + F PVD V + DY D+IK PMDLGT+ +KLE Y+ P
Sbjct: 581 RMQSIHRIIMTNKNAYMFLKPVDPVYWEIPDYFDVIKNPMDLGTIMTKLEKREYENQPSA 640
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
+A DVRL ++NA+ YN + VY MA +S +FE +
Sbjct: 641 YAADVRLVWSNAMTYNKEEEPVYKMARIMSREFEYQW 677
>gi|410563163|pdb|4HBW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazoline Ligand
Length = 127
Score = 80.9 bits (198), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 29 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 88
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN G + MAE L F Q +L ++
Sbjct: 89 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE 127
>gi|397620029|gb|EJK65508.1| hypothetical protein THAOC_13619 [Thalassiosira oceanica]
Length = 225
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 183 RCGEILTKLMKDK-QGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
+C I+ L++ F PVD V L+L Y D +KKPMDLGT+ KL +Y+ +
Sbjct: 67 QCLRIVNFLLEQPIAAELFGKPVDPVELKLPTYFDDVKKPMDLGTISKKLTRGIYQSIGD 126
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
F D+ LTF+NA+++N K H+V +A+ L FE ++++
Sbjct: 127 FESDMHLTFDNAILFNGKDHFVSKLAQNLKNTFEDKYKQM 166
>gi|397569150|gb|EJK46566.1| hypothetical protein THAOC_34760 [Thalassiosira oceanica]
Length = 229
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 183 RCGEILTKLMKDK-QGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
+C I+ L++ F PVD V L+L Y D +KKPMDLGT+ KL +Y+ +
Sbjct: 71 QCLRIVNFLLEQPIAAELFGKPVDPVELKLPTYFDDVKKPMDLGTISKKLTRGIYQSIGD 130
Query: 242 FAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
F D+ LTF+NA+++N K H+V +A+ L FE ++++
Sbjct: 131 FESDMHLTFDNAILFNGKDHFVSKLAQNLKNTFEDKYKQM 170
>gi|261278845|pdb|3JVJ|A Chain A, Crystal Structure Of The Bromodomain 1 In Mouse Brd4
gi|261278846|pdb|3JVK|A Chain A, Crystal Structure Of Bromodomain 1 Of Mouse Brd4 In
Complex With Histone H3-K(Ac)14
gi|302566174|pdb|3MUK|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Propionylated
Histone H3- K(Prop)23
gi|302566176|pdb|3MUL|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Butyrylated
Histone H3- K(Buty)14
Length = 131
Score = 80.9 bits (198), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 33 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 92
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN G + MAE L F Q +L ++
Sbjct: 93 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE 131
>gi|134105371|pdb|2OSS|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|308198555|pdb|3MXF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Jq1
gi|312208162|pdb|3P5O|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ibet Inhibitor
gi|340707484|pdb|2YEL|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|343197715|pdb|3SVF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Dihydro-Quinazolin Ligand
gi|343197716|pdb|3SVG|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-Dimethylisoxazol Ligand
gi|355333223|pdb|3ZYU|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|355333224|pdb|3ZYU|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|358009753|pdb|3U5J|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Alprazolam
gi|358009754|pdb|3U5K|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009755|pdb|3U5K|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009756|pdb|3U5K|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009757|pdb|3U5K|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009758|pdb|3U5L|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Benzo-Triazepine Ligand (Bzt-7)
gi|371927880|pdb|4A9L|A Chain A, N-Terminal Bromodomain Of Human Brd4 With 1,3-Dimethyl-6-(
Morpholine-4-Sulfonyl)-1,2,3,
4-Tetrahydroquinazolin-2-One
gi|372467090|pdb|3UVW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k5ack8ac)
gi|372467092|pdb|3UVY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k16ack20ac)
gi|374074443|pdb|3UVX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k12ack16ac)
gi|380259062|pdb|3UW9|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259063|pdb|3UW9|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259064|pdb|3UW9|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259065|pdb|3UW9|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|384482557|pdb|4E96|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Pfi-1
gi|404312911|pdb|4F3I|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ms417 Inhibitor
gi|409107327|pdb|4GPJ|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Isoxazolylbenzimidazole Ligand
gi|410563162|pdb|4HBV|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563164|pdb|4HBX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563165|pdb|4HBY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|449802776|pdb|4J0R|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
gi|449802777|pdb|4J0S|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
Length = 127
Score = 80.9 bits (198), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 54/99 (54%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
+L L K + W F PVD V L L DY+ IIK PMD+GT++ +LENN Y QE +D
Sbjct: 29 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 88
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN G + MAE L F Q +L ++
Sbjct: 89 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE 127
>gi|6323431|ref|NP_013503.1| Bdf1p [Saccharomyces cerevisiae S288c]
gi|5921175|sp|P35817.3|BDF1_YEAST RecName: Full=Bromodomain-containing factor 1
gi|625115|gb|AAB82357.1| Bdf1p [Saccharomyces cerevisiae]
gi|285813804|tpg|DAA09700.1| TPA: Bdf1p [Saccharomyces cerevisiae S288c]
gi|392297901|gb|EIW09000.1| Bdf1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 686
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
PK+KR + AM+ C +L +LM K + F PVD VS+ L Y D +
Sbjct: 309 PKSKR----------LQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYV 358
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
K+PMDLGT+ KL + Y+ ++F DVRL F N +NP G V M L F
Sbjct: 359 KEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y + IK+PMDL T+ KL Y+ P++ ED L NN++
Sbjct: 168 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSI 227
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 228 KFNGPNAGISQMARNIQASFEK 249
>gi|145519848|ref|XP_001445785.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413251|emb|CAK78388.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
K RR +I+ +L+ F PVD +L L DY I+KKPMDLGTV+ KL +N YK
Sbjct: 11 KEEQRRLNQIVQQLLDSNDSVEFRQPVDYKALNLHDYITIVKKPMDLGTVQRKLNSNTYK 70
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK-------------LSKQ 284
+E +D++L ++N +YN ++ +AE K E++F+K L +
Sbjct: 71 TVEECLDDIQLIWDNCKLYNGSQSWITKLAE----KLERLFKKNVRNYLPLVNLPQLVPK 126
Query: 285 QQRQG--ILGRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDE 342
+ G + ++S +K+ +L++L E++G ++ ++ + S N + G++
Sbjct: 127 YKDAGADVFQEEPQDQVSYNDKVEFSNNLKQLAPEQIGLIVHMI-QNTSPNAFVEIEGEK 185
Query: 343 IELDIEALD 351
++ ++ ++
Sbjct: 186 YQIIVDYIE 194
>gi|207342738|gb|EDZ70407.1| YLR399Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 686
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
PK+KR + AM+ C +L +LM K + F PVD VS+ L Y D +
Sbjct: 309 PKSKR----------LQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYV 358
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
K+PMDLGT+ KL + Y+ ++F DVRL F N +NP G V M L F
Sbjct: 359 KEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y + IK+PMDL T+ KL Y+ P++ ED L NN++
Sbjct: 168 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSI 227
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 228 KFNGPNAGISQMARNIQASFEK 249
>gi|608567|gb|AAA89115.1| Bdf1p [Saccharomyces cerevisiae]
Length = 685
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
PK+KR + AM+ C +L +LM K + F PVD VS+ L Y D +
Sbjct: 308 PKSKR----------LQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYV 357
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
K+PMDLGT+ KL + Y+ ++F DVRL F N +NP G V M L F
Sbjct: 358 KEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 413
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y + IK+PMDL T+ KL Y+ P++ ED L NN++
Sbjct: 167 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSI 226
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 227 KFNGPNAGISQMARNIQASFEK 248
>gi|323336416|gb|EGA77684.1| Bdf1p [Saccharomyces cerevisiae Vin13]
Length = 686
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
PK+KR + AM+ C +L +LM K + F PVD VS+ L Y D +
Sbjct: 309 PKSKR----------LQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYV 358
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
K+PMDLGT+ KL + Y+ ++F DVRL F N +NP G V M L F
Sbjct: 359 KEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y + IK+PMDL T+ KL Y+ P++ ED L NN++
Sbjct: 168 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSI 227
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 228 KFNGPNAGISQMARNIQASFEK 249
>gi|259148377|emb|CAY81624.1| Bdf1p [Saccharomyces cerevisiae EC1118]
Length = 686
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
PK+KR + AM+ C +L +LM K + F PVD VS+ L Y D +
Sbjct: 309 PKSKR----------LQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYV 358
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
K+PMDLGT+ KL + Y+ ++F DVRL F N +NP G V M L F
Sbjct: 359 KEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y + IK+PMDL T+ KL Y+ P++ ED L NN++
Sbjct: 168 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSI 227
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 228 KFNGPNAGISQMARNIQASFEK 249
>gi|151940920|gb|EDN59302.1| bromodomain factor [Saccharomyces cerevisiae YJM789]
gi|323303730|gb|EGA57516.1| Bdf1p [Saccharomyces cerevisiae FostersB]
gi|323307897|gb|EGA61157.1| Bdf1p [Saccharomyces cerevisiae FostersO]
Length = 686
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
PK+KR + AM+ C +L +LM K + F PVD VS+ L Y D +
Sbjct: 309 PKSKR----------LQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYV 358
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
K+PMDLGT+ KL + Y+ ++F DVRL F N +NP G V M L F
Sbjct: 359 KEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y + IK+PMDL T+ KL Y+ P++ ED L NN++
Sbjct: 168 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSI 227
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 228 KFNGPNAGISQMARNIQASFEK 249
>gi|365764189|gb|EHN05714.1| Bdf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 686
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
PK+KR + AM+ C +L +LM K + F PVD VS+ L Y D +
Sbjct: 309 PKSKR----------LQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYV 358
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
K+PMDLGT+ KL + Y+ ++F DVRL F N +NP G V M L F
Sbjct: 359 KEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y + IK+PMDL T+ KL Y+ P++ ED L NN++
Sbjct: 168 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSI 227
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 228 KFNGPNAGISQMARNIQASFEK 249
>gi|190405441|gb|EDV08708.1| protein BDF1 [Saccharomyces cerevisiae RM11-1a]
Length = 686
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
PK+KR + AM+ C +L +LM K + F PVD VS+ L Y D +
Sbjct: 309 PKSKR----------LQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYV 358
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
K+PMDLGT+ KL + Y+ ++F DVRL F N +NP G V M L F
Sbjct: 359 KEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y + IK+PMDL T+ KL Y+ P++ ED L NN++
Sbjct: 168 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSI 227
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 228 KFNGPNAGISQMARNIQASFEK 249
>gi|395515489|ref|XP_003761936.1| PREDICTED: CREB-binding protein [Sarcophilus harrisii]
Length = 2451
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1118 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1177
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1178 AWLYNRKTSRVYKFCTKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1233
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1234 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1288
Query: 373 TEKEPM 378
+ EP
Sbjct: 1289 LDPEPF 1294
>gi|350581782|ref|XP_003481109.1| PREDICTED: CREB-binding protein-like, partial [Sus scrofa]
gi|350581784|ref|XP_003354695.2| PREDICTED: CREB-binding protein-like, partial [Sus scrofa]
Length = 1353
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 20 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 79
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 80 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 135
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 136 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 190
Query: 373 TEKEPM 378
+ EP
Sbjct: 191 LDPEPF 196
>gi|347827938|emb|CCD43635.1| hypothetical protein [Botryotinia fuckeliana]
Length = 931
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C E L +L K K AF PVD V+L++ +Y +IK PMD+ TV KL+N Y
Sbjct: 550 LKWCEETLNELKKPKYLAFSGAFMDPVDPVALQIPNYFTVIKSPMDISTVSEKLQNGAYT 609
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
+EF +DV+L F+N +NP+G+ V M +FE +F L ++ R
Sbjct: 610 RAKEFEQDVKLIFHNCYKFNPEGNPVRLMGR----QFEDVFNGLLARKDR 655
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 170 GTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRD-YHDIIKKPMDLGTVR 228
G S T++ + +I+ ++K G F PV ++ D Y +K +DL +
Sbjct: 336 GNASRPITQHETKEIVKIIKNVIKTAAGKNFRAPVAILWPGFADAYAQKVKNEVDLSGME 395
Query: 229 SKLENNVYKCPQEFAEDVRLTFNNALVYN 257
K++N Y Q +D L + NA+ +N
Sbjct: 396 RKIKNGEYPSIQAIKDDAVLLYENAIAFN 424
>gi|154299583|ref|XP_001550210.1| hypothetical protein BC1G_10754 [Botryotinia fuckeliana B05.10]
Length = 931
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C E L +L K K AF PVD V+L++ +Y +IK PMD+ TV KL+N Y
Sbjct: 550 LKWCEETLNELKKPKYLAFSGAFMDPVDPVALQIPNYFTVIKSPMDISTVSEKLQNGAYT 609
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQR 287
+EF +DV+L F+N +NP+G+ V M +FE +F L ++ R
Sbjct: 610 RAKEFEQDVKLIFHNCYKFNPEGNPVRLMGR----QFEDVFNGLLARKDR 655
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 170 GTXSLTSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRD-YHDIIKKPMDLGTVR 228
G S T++ + +I+ ++K G F PV ++ D Y +K +DL +
Sbjct: 336 GNASRPITQHETKEIVKIIKNVIKTAAGKNFRAPVAILWPGFADAYAQKVKNEVDLSGME 395
Query: 229 SKLENNVYKCPQEFAEDVRLTFNNALVYN 257
K++N Y Q +D L + NA+ +N
Sbjct: 396 RKIKNGEYPSIQAIKDDAVLLYENAIAFN 424
>gi|444731777|gb|ELW72123.1| CREB-binding protein [Tupaia chinensis]
Length = 2821
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1015 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1074
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1075 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1130
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1131 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1185
Query: 373 TEKEPM 378
+ EP
Sbjct: 1186 LDPEPF 1191
>gi|334333431|ref|XP_003341719.1| PREDICTED: CREB-binding protein isoform 2 [Monodelphis domestica]
Length = 2417
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1080 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1139
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1140 AWLYNRKTSRVYKFCTKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1195
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1196 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1250
Query: 373 TEKEPM 378
+ EP
Sbjct: 1251 LDPEPF 1256
>gi|440473196|gb|ELQ42011.1| hypothetical protein OOU_Y34scaffold00240g18 [Magnaporthe oryzae
Y34]
gi|440484338|gb|ELQ64424.1| hypothetical protein OOW_P131scaffold00625g16 [Magnaporthe oryzae
P131]
Length = 1000
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C +IL L K K W F PVD Y+ IIKKPMDLGT+ KL+ Y+
Sbjct: 574 LKYCDDILKDLAKPKSHGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGKYR 633
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
+F D L NN +NP G V+A+A L A F+ + + + R AR
Sbjct: 634 SAADFKADFDLMLNNCFTFNPAGTDVHALARNLEAYFQDKWAGIDAYVAKHA--SRAPAR 691
Query: 298 EMSL--------EEKMALGRSLE---ELPQEELGKLLGIVKKRNSGNGSLSCH 339
S +E G + E E+P L ++ + KK ++ + S++ H
Sbjct: 692 RTSASSPSAGIKDESEDEGPASEPEPEVPAAHLDQIRELKKKIDAVDASITKH 744
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPV-DVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
A R L + K K G F V + + Y+ +KKPMD+G + L VYK
Sbjct: 373 ANREIRRALGSVKKTKAGGNFKDSVAKLWPVLAESYNSKVKKPMDIGLMERNLRTGVYKT 432
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EF D+ L N+ +N H V A +L E + KL
Sbjct: 433 IGEFKADLDLLVLNSYYFNGAMHDVTKSAISL---LESVLYKL 472
>gi|389632607|ref|XP_003713956.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
gi|351646289|gb|EHA54149.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
Length = 1021
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C +IL L K K W F PVD Y+ IIKKPMDLGT+ KL+ Y+
Sbjct: 595 LKYCDDILKDLAKPKSHGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGKYR 654
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAR 297
+F D L NN +NP G V+A+A L A F+ + + + R AR
Sbjct: 655 SAADFKADFDLMLNNCFTFNPAGTDVHALARNLEAYFQDKWAGIDAYVAKHA--SRAPAR 712
Query: 298 EMSL--------EEKMALGRSLE---ELPQEELGKLLGIVKKRNSGNGSLSCH 339
S +E G + E E+P L ++ + KK ++ + S++ H
Sbjct: 713 RTSASSPSAGIKDESEDEGPASEPEPEVPAAHLDQIRELKKKIDAVDASITKH 765
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Query: 180 AMRRCGEILTKLMKDKQGWAFNTPV-DVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC 238
A R L + K K G F V + + Y+ +KKPMD+G + L VYK
Sbjct: 394 ANREIRRALGSVKKTKAGGNFKDSVAKLWPVLAESYNSKVKKPMDIGLMERNLRTGVYKT 453
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
EF D+ L N+ +N H V A +L E + KL
Sbjct: 454 IGEFKADLDLLVLNSYYFNGAMHDVTKSAISL---LESVLYKL 493
>gi|449475600|ref|XP_002192837.2| PREDICTED: CREB-binding protein [Taeniopygia guttata]
Length = 2361
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1118 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1177
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1178 AWLYNRKTSRVYKFCTKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1233
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1234 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1288
Query: 373 TEKEPM 378
+ EP
Sbjct: 1289 LDPEPF 1294
>gi|323347321|gb|EGA81594.1| Bdf1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 635
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
PK+KR + AM+ C +L +LM K + F PVD VS+ L Y D +
Sbjct: 309 PKSKR----------LQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYV 358
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
K+PMDLGT+ KL + Y+ ++F DVRL F N +NP G V M L F
Sbjct: 359 KEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 414
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y + IK+PMDL T+ KL Y+ P++ ED L NN++
Sbjct: 168 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSI 227
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 228 KFNGPNAGISQMARNIQASFEK 249
>gi|126335202|ref|XP_001363636.1| PREDICTED: CREB-binding protein isoform 1 [Monodelphis domestica]
Length = 2455
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1118 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1177
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1178 AWLYNRKTSRVYKFCTKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1233
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1234 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1288
Query: 373 TEKEPM 378
+ EP
Sbjct: 1289 LDPEPF 1294
>gi|345565069|gb|EGX48025.1| hypothetical protein AOL_s00081g352 [Arthrobotrys oligospora ATCC
24927]
Length = 890
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+ C I+ +L K + + F PVD V+L + DY IIKKPMD+ ++ KL +N Y
Sbjct: 529 FKFCETIMKELWKKQHNSIAYPFYNPVDPVALEIPDYFKIIKKPMDMSEIQRKLNHNEYN 588
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK 280
EF D+RL FNN +NP VY + L A F++ + +
Sbjct: 589 NSNEFEADIRLMFNNCYKFNPPSSPVYDCGKQLEAVFDEKWSQ 631
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
TK A+ I K +KD Q AF PVD V L+L Y +IIK PM L + KL N Y
Sbjct: 309 TKFALSNLKNI--KRLKDAQ--AFLNPVDPVKLQLPTYFEIIKNPMSLFDIEKKLTANEY 364
Query: 237 KCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
P E DV L N++++N H V + K+ +K+
Sbjct: 365 HNPAELKGDVHLMVQNSILFNGVEHAVTQSGIHIRDKYLHALEKM 409
>gi|118098171|ref|XP_414964.2| PREDICTED: CREB-binding protein [Gallus gallus]
Length = 2447
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1103 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1162
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1163 AWLYNRKTSRVYKFCTKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1218
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1219 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1273
Query: 373 TEKEPM 378
+ EP
Sbjct: 1274 LDPEPF 1279
>gi|324499820|gb|ADY39933.1| Protein cbp-1 [Ascaris suum]
Length = 2164
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
IL KL ++ F PVD L + DY DI+K PMDL T+ KL+N +YK P +F +D+
Sbjct: 950 ILDKLFNLEESIPFRIPVDPDILGIPDYFDIVKNPMDLSTISEKLDNGLYKNPWQFCDDM 1009
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKF 274
L F+NA +YN K VY LS F
Sbjct: 1010 WLMFDNAWLYNRKNSKVYKYCTKLSELF 1037
>gi|195063000|ref|XP_001996295.1| GH22416 [Drosophila grimshawi]
gi|193899790|gb|EDV98656.1| GH22416 [Drosophila grimshawi]
Length = 291
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L + F PV+ L+L DYHDIIK+PMDL T++ +L NN Y E A D+
Sbjct: 36 VMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANNYYWSATEAAADI 95
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQG 289
L F N +YN V MA+ L + F Q + + K++ G
Sbjct: 96 NLIFTNCSLYNKPTEDVIIMAKVLESVFLQAIKDMPKEELELG 138
>gi|326929322|ref|XP_003210816.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein-like [Meleagris
gallopavo]
Length = 2442
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1098 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1157
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1158 AWLYNRKTSRVYKFCTKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1213
Query: 313 ELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDNFKKAEKDK 372
+P++ +N + C + ++ D+ + Q D F+K + D
Sbjct: 1214 TIPRDA-----AYYSYQNRYHFCEKCFTEIQGENVTLGDDPSQPQTTISKDQFEKKKNDT 1268
Query: 373 TEKEPM 378
+ EP
Sbjct: 1269 LDPEPF 1274
>gi|219115425|ref|XP_002178508.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410243|gb|EEC50173.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1386
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 12/117 (10%)
Query: 180 AMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVY 236
M +C +IL ++M +K G F PVD V+L + YH +IK+PMDL T+R +LE +
Sbjct: 815 VMEKCSQIL-RIMHEKDVELGAFFGEPVDPVALGIPTYHQVIKEPMDLKTIRRRLEADEI 873
Query: 237 KCPQEFAEDVRLTFNNALVYNPK-GHYVYAMAETLSAKF-------EQMFQKLSKQQ 285
P++FA VRL F NA+++N H V+ A L +F E M Q + + Q
Sbjct: 874 NSPEKFARLVRLVFENAMMFNIDPAHAVHQSARNLLIQFNTKFRDVEHMLQTIRRNQ 930
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 296 AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTL 355
++ +SL+E+ L ++ ELP ++LG ++ I+++ + DEI+L+I+ LD T
Sbjct: 1074 SKPLSLDEQELLTETINELPPDQLGGVIQIIREA----APVGADEDEIDLEIDQLDTKTQ 1129
Query: 356 SQLVRFVDNF 365
+L+R V F
Sbjct: 1130 RKLLRHVLKF 1139
>gi|407040562|gb|EKE40194.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 557
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C IL +M +++ F T VD ++L + DY+ I+K PMDL TV KL +Y+ ++F
Sbjct: 322 CSSILGAIMNNQESEPFKTEVDPIALNILDYYKIVKHPMDLETVSIKLSKGLYETKEDFK 381
Query: 244 EDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMF 278
+D++L F NA +YN + ++ A L KF++MF
Sbjct: 382 KDMKLIFENAKIYNSSENSIHQSAINLMKKFDKMF 416
>gi|326925069|ref|XP_003208744.1| PREDICTED: bromodomain testis-specific protein-like [Meleagris
gallopavo]
Length = 824
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
++ C EIL ++ K W F DVVS L + I K P DLGT++ K++N Y+
Sbjct: 284 LKYCNEILKEMFSKKHSAYAWPFLKSADVVSFSLGEKKGITKCPADLGTIKKKMDNFEYR 343
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
QEFA DVRL F N +N H V AMA+ L FE F K+
Sbjct: 344 DIQEFATDVRLMFMNCYKHNSPDHEVVAMAKKLQDVFETHFAKI 387
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
W F+ PVD +L L DY+ IIKKPMDL T++ +LE+N Y E +D + F N +Y
Sbjct: 49 SWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKRLEHNYYTKAAECIDDFKTMFLNCYIY 108
Query: 257 NPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEE 303
N G + MA+ L F Q ++ ++ I +GK +E EE
Sbjct: 109 NKPGDDIVFMAQELEKVFMQKIAQMPPEEIL--IPDKGKRKEKLSEE 153
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 282 SKQQQRQGILGRGK-----AREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL 336
SK+ RQ +L A+ M+ +EK L ++ +LP ++LGK++ I++ R +
Sbjct: 516 SKKTIRQVLLAHKSEDDDGAKPMTYDEKRQLSLNINKLPGDKLGKVVHIIQSREPSLRNS 575
Query: 337 SCHGDEIELDIEALDNDTLSQLVRFV 362
S DEIE+D E L TL +L ++V
Sbjct: 576 S--PDEIEIDFETLKASTLRELEKYV 599
>gi|427795843|gb|JAA63373.1| Putative bromodomain adjacent to zinc finger domain protein 2b,
partial [Rhipicephalus pulchellus]
Length = 1933
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 184 CGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFA 243
C +IL +L + K W F PV+ + + Y IKKPMD+ T+RSKLE+N YKC EFA
Sbjct: 1836 CRQILEELEQHKDAWPFLVPVN--TKQFPSYRKFIKKPMDVSTMRSKLESNQYKCKDEFA 1893
Query: 244 EDVRLTFNNALVYN----PKGHYVYAMAETLSAKFEQM 277
DVRL F+N +N P G + M +++E++
Sbjct: 1894 LDVRLIFDNCETFNEDDSPVGQAGHNMRNFFESRWEEL 1931
>gi|410979451|ref|XP_003996097.1| PREDICTED: bromodomain-containing protein 3 [Felis catus]
Length = 695
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH IIK PMD+GT++ +LEN+ Y E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQDF 105
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQ 285
F N +YN + MA+ L F Q ++ +++
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 230 KLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K+++ Y Q FA D+RL F+N YNP H V AMA L FE F K+
Sbjct: 332 KMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 383
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 299 MSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEALDNDTLSQ 357
MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L TL +
Sbjct: 542 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETLKPTTLRE 598
Query: 358 LVRFV 362
L R+V
Sbjct: 599 LERYV 603
>gi|151941931|gb|EDN60287.1| bromodomain factor [Saccharomyces cerevisiae YJM789]
Length = 638
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 102/251 (40%), Gaps = 75/251 (29%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
R C +IL LM K + F PVD ++L L +Y D++K PMDLGT+ + L N YK
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF----------------------- 274
+F +D+ L F N +NP+G+ V++M + L F
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKNLKELFNFHWLENQDILNEIETDSDLEED 442
Query: 275 ---------------------------EQMFQKLSKQQQRQGILGRGKAREMSLEEKMA- 306
+ + QKL K + L R + ++S E K
Sbjct: 443 NYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVELQQLKRQELSKLSKERKRKH 502
Query: 307 LGRSL---------------------EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIEL 345
LG++L EL E+ ++ I+K + L+ + DEIE+
Sbjct: 503 LGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEI 562
Query: 346 DIEALDNDTLS 356
D++ LD T++
Sbjct: 563 DLDILDEATIA 573
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
TK +KD + F PVD ++L + Y + ++ PMDL + +KL+ NVY ++ D +
Sbjct: 149 TKRLKDAR--PFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKT 206
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQ 276
+N L +N + +MA+ + FE+
Sbjct: 207 MVDNCLNFNGPESSISSMAKRIQKYFEK 234
>gi|367036160|ref|XP_003667362.1| hypothetical protein MYCTH_2313125 [Myceliophthora thermophila ATCC
42464]
gi|347014635|gb|AEO62117.1| hypothetical protein MYCTH_2313125 [Myceliophthora thermophila ATCC
42464]
Length = 957
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
+R C E+LT+L K K AF PVD V+L + DYH +IK+PMDL T+ +KL Y+
Sbjct: 545 LRFCDEVLTELRKTKHYDINAAFMQPVDPVALNIPDYHKVIKRPMDLQTMSNKLSAGEYQ 604
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMA 267
+EF +D L N +N + H VYA A
Sbjct: 605 SIKEFEKDFDLIIKNCKTFNGEDHIVYAQA 634
>gi|254579016|ref|XP_002495494.1| ZYRO0B12672p [Zygosaccharomyces rouxii]
gi|238938384|emb|CAR26561.1| ZYRO0B12672p [Zygosaccharomyces rouxii]
Length = 701
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 178 KNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENN 234
+ AM+ C +++ +L+ K + F PVD V+L Y D +K+PMDLGTV SKL N
Sbjct: 308 QQAMKFCQQVVRELISKKYASFNYPFLEPVDPVALNCPTYFDYVKEPMDLGTVSSKLNNW 367
Query: 235 VYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
Y+ +EF DVRL F N +NP+G V M L F
Sbjct: 368 KYQSMEEFENDVRLVFRNCYTFNPEGTIVNMMGHRLEDVF 407
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
K+ R + + + K F PV+ V+L + Y + IK+PMDL T+ KL N ++
Sbjct: 141 KHQQRHAIMTIKAVKRLKDARPFLKPVNPVALNVPFYFNYIKRPMDLSTIERKLNVNAFE 200
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQ 276
P++ +D L NN + +N + MA + A FE+
Sbjct: 201 TPEQVQDDFNLMVNNCVKFNGPQAVISQMARNIQASFEK 239
>gi|351700208|gb|EHB03127.1| CREB-binding protein [Heterocephalus glaber]
Length = 2098
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 193 KDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNN 252
+D + F PVD L + DY DI+K PMDL T++ KL+ Y+ P ++ +DV L FNN
Sbjct: 1034 QDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNN 1093
Query: 253 ALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKMALGRSLE 312
A +YN K VY L+ FE Q++ Q G G+ E S + G+ L
Sbjct: 1094 AWLYNRKTSRVYKFCSKLAEVFE---QEIDPVMQSLGYCC-GRKYEFSPQTLCCYGKQLC 1149
Query: 313 ELPQE 317
+P++
Sbjct: 1150 TIPRD 1154
>gi|308489328|ref|XP_003106857.1| hypothetical protein CRE_17238 [Caenorhabditis remanei]
gi|308252745|gb|EFO96697.1| hypothetical protein CRE_17238 [Caenorhabditis remanei]
Length = 392
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Query: 150 RGGSKRANPFGNPKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDV 206
RG KRA PK+ GT L +++C +L + K + F PVD
Sbjct: 93 RGRKKRA-----PKSDSEDEGTNDLEDLGEDVKKCLGLLKEFEKTTHNAYTFPFRKPVDT 147
Query: 207 VSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAM 266
V L L DYH++IKKPMD+ T++ KL Y+ ++F +D +L N L YN +G V +
Sbjct: 148 VLLGLVDYHEVIKKPMDMSTMKKKLIGEEYENAEDFKKDFKLMIQNCLTYNNEGDPVSDL 207
Query: 267 A----ETLSAKFEQMF 278
A E +AK+++ F
Sbjct: 208 AIQFREAFAAKWKKEF 223
>gi|357611203|gb|EHJ67366.1| hypothetical protein KGM_19207 [Danaus plexippus]
Length = 2058
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 16/195 (8%)
Query: 188 LTKLMK-DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
L KL + D + F PVD +L + DY +I+ +P+DL T++ KL+ YK P E+ +DV
Sbjct: 1012 LEKLFRLDPESLPFRQPVDAQALGIPDYFEIVTRPIDLSTIKMKLDRGEYKDPWEYVDDV 1071
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGILGRGKAREMSLEEKM- 305
L F NA +YN K VY LS FE + + LG R+ + ++
Sbjct: 1072 WLMFENAWLYNRKNSRVYRYCTKLSEVFEVEIDPVMQS------LGYCCGRKYTFNPQVL 1125
Query: 306 -ALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLS-QLVRFVD 363
G+ L +P++ +N C D I+ D L +D L Q D
Sbjct: 1126 CCYGKQLCTIPRDA-----KYFSYQNRYTFCTKCFHD-IQGDTVTLGDDPLQPQTAIKKD 1179
Query: 364 NFKKAEKDKTEKEPM 378
FK+ + D E+EP
Sbjct: 1180 QFKEMKNDHLEQEPF 1194
>gi|323332433|gb|EGA73842.1| Bdf1p [Saccharomyces cerevisiae AWRI796]
Length = 420
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 162 PKAKRAAAGTXSLTSTKNAMRRCGEILTKLMKDKQG---WAFNTPVDVVSLRLRDYHDII 218
PK+KR + AM+ C +L +LM K + F PVD VS+ L Y D +
Sbjct: 309 PKSKR----------LQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYV 358
Query: 219 KKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF 274
K+PMDLGT+ KL + Y+ ++F DVRL F N +NP G V M L F
Sbjct: 359 KEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 414
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 195 KQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNAL 254
K F PVD V L + Y + IK+PMDL T+ KL Y+ P++ ED L NN++
Sbjct: 168 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSI 227
Query: 255 VYNPKGHYVYAMAETLSAKFEQ 276
+N + MA + A FE+
Sbjct: 228 KFNGPNAGISQMARNIQASFEK 249
>gi|432876083|ref|XP_004072968.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 494
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
++ L K + W F PVD + L L DYH +IK PMD+GT++ +LENN Y E +D
Sbjct: 43 VVKTLWKHQFAWPFYQPVDAIKLCLWDYHKVIKNPMDMGTIKKRLENNYYWSASEAMQDF 102
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQRQGIL 291
F N +YN + MA+ L F QK+++ Q + L
Sbjct: 103 NTMFTNCYIYNKPTDDIVLMAQALEKIF---LQKVAQMPQEEVAL 144
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 230 KLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
K++ + Y PQ FA DVRL F+N YNP H V AMA L FE F K+
Sbjct: 176 KMDKSEYSDPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 227
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 292 GRGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSL-SCHGDEIELDIEAL 350
G + MS +EK L + LP E+LG+++ I++ R SL + DEIE+D E L
Sbjct: 375 GEESSLPMSYDEKRQLSLDINRLPGEKLGRVVHIIQSREP---SLRDSNPDEIEIDFETL 431
Query: 351 DNDTLSQLVRFV 362
TL +L R+V
Sbjct: 432 KPSTLRELERYV 443
>gi|349577009|dbj|GAA22178.1| K7_Bdf2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 638
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 102/251 (40%), Gaps = 75/251 (29%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
R C +IL LM K + F PVD ++L L +Y D++K PMDLGT+ + L N YK
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF----------------------- 274
+F +D+ L F N +NP+G+ V++M + L F
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEED 442
Query: 275 ---------------------------EQMFQKLSKQQQRQGILGRGKAREMSLEEKMA- 306
+ + QKL K + L R + ++S E K
Sbjct: 443 NYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVELQQLKRQELSKLSKERKRKH 502
Query: 307 LGRSL---------------------EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIEL 345
LG++L EL E+ ++ I+K + L+ + DEIE+
Sbjct: 503 LGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEI 562
Query: 346 DIEALDNDTLS 356
D++ LD T++
Sbjct: 563 DLDILDEATIA 573
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
TK +KD + F PVD ++L + Y + ++ PMDL + +KL+ NVY ++ D +
Sbjct: 149 TKRLKDAR--PFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKT 206
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQ 276
+N L +N + +MA+ + FE+
Sbjct: 207 MVDNCLNFNGPESSISSMAKRIQKYFEK 234
>gi|256274113|gb|EEU09024.1| Bdf2p [Saccharomyces cerevisiae JAY291]
Length = 638
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 102/251 (40%), Gaps = 75/251 (29%)
Query: 181 MRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
R C +IL LM K + F PVD ++L L +Y D++K PMDLGT+ + L N YK
Sbjct: 323 FRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYK 382
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKF----------------------- 274
+F +D+ L F N +NP+G+ V++M + L F
Sbjct: 383 TIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEED 442
Query: 275 ---------------------------EQMFQKLSKQQQRQGILGRGKAREMSLEEKMA- 306
+ + QKL K + L R + ++S E K
Sbjct: 443 NYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVELQQLKRQELSKLSKERKRKH 502
Query: 307 LGRSL---------------------EELPQEELGKLLGIVKKRNSGNGSLSCHGDEIEL 345
LG++L EL E+ ++ I+K + L+ + DEIE+
Sbjct: 503 LGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEI 562
Query: 346 DIEALDNDTLS 356
D++ LD T++
Sbjct: 563 DLDILDEATIA 573
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 189 TKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRL 248
TK +KD + F PVD ++L + Y + ++ PMDL + +KL+ NVY ++ D +
Sbjct: 149 TKRLKDAR--PFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKT 206
Query: 249 TFNNALVYNPKGHYVYAMAETLSAKFEQ 276
+N L +N + +MA+ + FE+
Sbjct: 207 MVDNCLNFNGPESSISSMAKRIQKYFEK 234
>gi|393218547|gb|EJD04035.1| Bromodomain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 795
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 158 PFGNPKAK-RAAAGTXSLTSTKNAMRRCGEILTKLMKDKQ---GWAFNTPVDVVSLRLRD 213
P+ P K R+ + T+ +R CG+ILT L K F PVD V L +
Sbjct: 432 PYAEPSKKMRSVRKAKTDDGTEEQLRYCGKILTDLHKKSLFTIASPFYEPVDAVKLGIPH 491
Query: 214 YHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAK 273
Y I+K+PMDLGT+R KL+N Y +F ED L N + +NP G V+ +
Sbjct: 492 YPKIVKRPMDLGTMRKKLDNREYPNAAKFKEDFALMIRNCMAFNPVGTAVHDAGVEIQRV 551
Query: 274 FEQMFQKL 281
FE+ + L
Sbjct: 552 FEEKWSHL 559
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 175 TSTKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL--- 231
T ++ R C + L K K F PVD V+L + Y I+K PMD T+ KL
Sbjct: 249 TLSQAQYRFCVSTVRNLRKLKDATPFLNPVDPVALNIPHYLSIVKHPMDFATIDRKLVAS 308
Query: 232 ---------ENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
N Y EF DVRL F+NA +N H V M + + A F++ ++L
Sbjct: 309 NPVKPDSNPANPRYLTADEFIADVRLMFSNAYTFNGPEHVVTQMGKRVEAIFDKQIKQL 367
>gi|405978367|gb|EKC42766.1| CREB-binding protein [Crassostrea gigas]
Length = 2101
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 188 LTKLMK-DKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDV 246
L KL + D + F PVD V L + DY DI+KKPMDL T+R KL+ Y P ++ +DV
Sbjct: 856 LEKLYRQDPESMPFRQPVDPVMLNIPDYFDIVKKPMDLSTIRRKLDTGQYTDPWQYCDDV 915
Query: 247 RLTFNNALVYNPKGHYVYAMAETLSAKFE 275
L F+NA +YN K VY + L+ FE
Sbjct: 916 WLMFDNAWLYNRKTSRVYKYSSKLAEVFE 944
>gi|344301621|gb|EGW31926.1| hypothetical protein SPAPADRAFT_61027 [Spathaspora passalidarum
NRRL Y-27907]
Length = 330
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 197 GWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVY 256
+ F +PVD V+L + +Y++++K+PMDLGT+++KL NN Y+ EF DVRL F N ++
Sbjct: 9 NFPFLSPVDTVALNIPNYNEVVKEPMDLGTIQTKLANNQYENGDEFEHDVRLVFKNCYLF 68
Query: 257 NPKGHYVYAMAETLSAKFEQ 276
NP+G V M L A F++
Sbjct: 69 NPEGTDVNMMGHRLEAVFDK 88
>gi|148671747|gb|EDL03694.1| bromodomain and WD repeat domain containing 1, isoform CRA_a [Mus
musculus]
Length = 2225
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
R+C +L + + + F PVD+ DY DII PMD GTVR LE Y P E
Sbjct: 1288 RQCKALLILIFQCEDSEPFRQPVDLDEYP--DYRDIIDTPMDFGTVRETLEAGNYDSPVE 1345
Query: 242 FAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
F +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1346 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1387
>gi|334185931|ref|NP_001190072.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|332645405|gb|AEE78926.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 50/235 (21%)
Query: 177 TKNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLE---N 233
++ MR+ G I ++ + K W F PV+V L L DY ++I KPMD T+++++E
Sbjct: 108 MQDLMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDG 167
Query: 234 NVYKCPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKLSKQQQ------- 286
YK + D+RL F NA+ YN + VY+MA+ L KFE+ + + Q
Sbjct: 168 TGYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIRE 227
Query: 287 -------RQGILGRGKA-----REMS---------LEEKMA----------------LGR 309
++ +L + + RE+ LE+ M +G
Sbjct: 228 EEEKQAAKEALLAKEASHIKTTRELGNEICHANDELEKLMRKVVERCRKITIEEKRNIGL 287
Query: 310 SLEELPQEELGKLLGIVKKRNSGNGSLSCHGDEIELDIEALDNDTLSQLVRFVDN 364
+L +L ++L K+LGIV + N S +E+ ++++ LD TL +L FV +
Sbjct: 288 ALLKLSPDDLQKVLGIVAQ---ANPSFQPRAEEVSIEMDILDEPTLWRLKFFVKD 339
>gi|157057182|ref|NP_001096649.1| bromodomain and WD repeat-containing protein 1 isoform B [Mus
musculus]
Length = 2259
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
R+C +L + + + F PVD+ DY DII PMD GTVR LE Y P E
Sbjct: 1322 RQCKALLILIFQCEDSEPFRQPVDLDEYP--DYRDIIDTPMDFGTVRETLEAGNYDSPVE 1379
Query: 242 FAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
F +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1380 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1421
>gi|320170046|gb|EFW46945.1| E1A binding protein p300 [Capsaspora owczarzaki ATCC 30864]
Length = 2072
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 187 ILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKL----ENNVYKCPQEF 242
I +L +D+ F PVD V+L + DY +IK+PMD T+R++L + + Y+ P F
Sbjct: 895 IFEELCRDENAGPFMVPVDPVALGILDYLTVIKRPMDFSTIRTRLDRPTDKHFYRDPLGF 954
Query: 243 AEDVRLTFNNALVYNPKGHYVYAMAETLSAKFE 275
+D+RL F NAL YN K V+ MA LS FE
Sbjct: 955 VDDMRLVFTNALTYNKKNSRVHKMATKLSDLFE 987
>gi|14970591|emb|CAC44373.1| WDR9 protein, form A [Mus musculus]
Length = 2304
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
R+C +L + + + F PVD+ DY DII PMD GTVR LE Y P E
Sbjct: 1322 RQCKALLILIFQCEDSEPFRQPVDLDEYP--DYRDIIDTPMDFGTVRETLEAGNYDSPVE 1379
Query: 242 FAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
F +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1380 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1421
>gi|157057180|ref|NP_660107.2| bromodomain and WD repeat-containing protein 1 isoform A [Mus
musculus]
gi|341940291|sp|Q921C3.2|BRWD1_MOUSE RecName: Full=Bromodomain and WD repeat-containing protein 1;
AltName: Full=WD repeat-containing protein 9
Length = 2304
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
R+C +L + + + F PVD+ DY DII PMD GTVR LE Y P E
Sbjct: 1322 RQCKALLILIFQCEDSEPFRQPVDLDEYP--DYRDIIDTPMDFGTVRETLEAGNYDSPVE 1379
Query: 242 FAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
F +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1380 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1421
>gi|14970593|emb|CAC44374.1| WDR protein, form B [Mus musculus]
Length = 2259
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
R+C +L + + + F PVD+ DY DII PMD GTVR LE Y P E
Sbjct: 1322 RQCKALLILIFQCEDSEPFRQPVDLDEYP--DYRDIIDTPMDFGTVRETLEAGNYDSPVE 1379
Query: 242 FAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
F +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1380 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1421
>gi|229594660|ref|XP_001022708.3| Bromodomain containing protein [Tetrahymena thermophila]
gi|225566724|gb|EAS02463.3| Bromodomain containing protein [Tetrahymena thermophila SB210]
Length = 270
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Query: 178 KNAMRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYK 237
K +++ ++L++L+++ F VD +L L DY +IIK PMDLGT + KL+NN Y
Sbjct: 18 KEELKKLNQMLSQLLQNNDSIEFRQAVDWKALGLMDYPNIIKYPMDLGTCKEKLKNNEYN 77
Query: 238 CPQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQK-LSKQQQRQGILGRGKA 296
++ +D+++ ++N YN +G ++Y +AE L F+ M + L Q ++ + K
Sbjct: 78 FVEDCLDDIQIVWDNCKNYNAEGSWIYKLAEKLEKHFKNMIKNYLPSIQFMNAVVKKEKL 137
Query: 297 REMSLEE 303
+M + +
Sbjct: 138 SQMKINQ 144
>gi|242769778|ref|XP_002341843.1| transcription regulator BDF1, putative [Talaromyces stipitatus ATCC
10500]
gi|218725039|gb|EED24456.1| transcription regulator BDF1, putative [Talaromyces stipitatus ATCC
10500]
Length = 798
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 157 NPFGNPKAKRAAAGTXSLTSTKNAMRR-------CGEILTKLMKDKQGWA----FNTPVD 205
NP G PK A L S K ++ C EIL ++ K K WA F PVD
Sbjct: 423 NPDGRPKRAIHAPKRDLLYSAKPKKKKFQWELKFCQEILDEVHKPKY-WAIANPFYYPVD 481
Query: 206 VVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQEFAEDVRLTFNNALVYNPKGHYVYA 265
V+L + YH +IKKPMDL T++ KL+ Y+ +EF DVRL N +N G +Y
Sbjct: 482 PVALNIPTYHSVIKKPMDLSTIQVKLKAGQYENAKEFEADVRLMLKNCFKFNIPGDPIYQ 541
Query: 266 MAETLSAKFEQMF 278
+ KFE++F
Sbjct: 542 AGQ----KFEEVF 550
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQ 240
+ +C LT L + + PVD + L + Y +I +PMDL T+ SKL+ N Y
Sbjct: 266 LVKC---LTNLKRSNDSRFYREPVDPIKLNIPTYFTVITEPMDLSTIESKLKKNQYNTVA 322
Query: 241 EFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQKL 281
E DV L NA +N H V + L A F + QKL
Sbjct: 323 EVIADVDLMAGNAAKFNGPEHIVSQEGQKLKALFRKQLQKL 363
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 293 RGKAREMSLEEKMALGRSLEELPQEELGKLLGIVKKRNSGNGSLSCHG---DEIELDIEA 349
R + R ++ EK + + LP +++ + L I++ N S G E+ELDI+
Sbjct: 647 RPEKRHVTYAEKQLISNGIGSLPDKKMQEALKIIQ-----NNVPSLKGLEETEVELDIDE 701
Query: 350 LDNDTLSQLVRFVDNFKKAEKDKTEKEPMCSQVAVAVAA 388
L N+ L L++FV KK + E M + V+ AV A
Sbjct: 702 LPNEVLVMLLKFV---KKNAPQVVDDEDMSAPVSAAVQA 737
>gi|148671748|gb|EDL03695.1| bromodomain and WD repeat domain containing 1, isoform CRA_b [Mus
musculus]
Length = 2269
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 182 RRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKCPQE 241
R+C +L + + + F PVD+ DY DII PMD GTVR LE Y P E
Sbjct: 1287 RQCKALLILIFQCEDSEPFRQPVDLDEYP--DYRDIIDTPMDFGTVRETLEAGNYDSPVE 1344
Query: 242 FAEDVRLTFNNALVYNP-KGHYVYAMAETLSAKFEQMFQKLS 282
F +D+RL F+NA Y P K +Y+M LSA FE+ +K+S
Sbjct: 1345 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKIS 1386
>gi|298715287|emb|CBJ27936.1| Chromodomain-helicase-DNA-binding protein 8 [Ectocarpus
siliculosus]
Length = 3661
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 181 MRRCGEILTKLMKDKQGWAFNTPVDVVSLRLRDYHDIIKKPMDLGTVRSKLENNVYKC-- 238
M RC +L+ LM+D F+ PVD+ + Y + + +PMDLGT++ KL+N Y+
Sbjct: 413 MTRCRHVLSALMEDDLSLVFHDPVDLDAYP--SYEEKVDEPMDLGTIKGKLDNWEYRRND 470
Query: 239 PQEFAEDVRLTFNNALVYNPKGHYVYAMAETLSAKFEQMFQ 279
P F D RL F N V+N G ++ +A+ L AKFE++FQ
Sbjct: 471 PMGFLRDGRLVFTNCKVFNKFGSAIWYIADYLQAKFERLFQ 511
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.126 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,348,279,137
Number of Sequences: 23463169
Number of extensions: 316052504
Number of successful extensions: 1881511
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6846
Number of HSP's successfully gapped in prelim test: 1578
Number of HSP's that attempted gapping in prelim test: 1790872
Number of HSP's gapped (non-prelim): 71528
length of query: 467
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 321
effective length of database: 8,933,572,693
effective search space: 2867676834453
effective search space used: 2867676834453
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 79 (35.0 bits)