Query 038230
Match_columns 480
No_of_seqs 265 out of 2435
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 15:11:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038230.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038230hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bmb_A Folic acid synthesis pr 100.0 5E-116 2E-120 936.6 41.5 433 43-475 18-543 (545)
2 3mcm_A 2-amino-4-hydroxy-6-hyd 100.0 6E-116 2E-120 916.9 28.8 413 36-459 14-442 (442)
3 4hb7_A Dihydropteroate synthas 100.0 7.5E-82 2.6E-86 620.4 29.5 255 209-476 5-263 (270)
4 2y5s_A DHPS, dihydropteroate s 100.0 1.8E-77 6.1E-82 600.2 29.6 270 198-476 11-291 (294)
5 2vp8_A Dihydropteroate synthas 100.0 2E-77 6.8E-82 604.5 26.4 276 195-476 27-308 (318)
6 2dqw_A Dihydropteroate synthas 100.0 2.6E-77 8.8E-82 598.2 25.6 269 197-475 16-288 (294)
7 3tr9_A Dihydropteroate synthas 100.0 2.7E-76 9.3E-81 593.7 28.8 270 197-477 14-294 (314)
8 1aj0_A DHPS, dihydropteroate s 100.0 8.6E-76 2.9E-80 585.5 31.0 270 198-475 3-275 (282)
9 1eye_A DHPS 1, dihydropteroate 100.0 1.3E-75 4.5E-80 583.6 30.0 261 209-475 4-273 (280)
10 2vef_A Dihydropteroate synthas 100.0 9.2E-75 3.1E-79 586.1 24.1 263 209-476 8-303 (314)
11 1tx2_A DHPS, dihydropteroate s 100.0 1.4E-73 4.8E-78 572.7 28.9 265 198-475 27-294 (297)
12 2yci_X 5-methyltetrahydrofolat 100.0 1.6E-56 5.4E-61 444.9 19.0 238 207-475 6-257 (271)
13 2h9a_B CO dehydrogenase/acetyl 100.0 6.7E-55 2.3E-59 439.7 19.4 239 207-473 43-309 (310)
14 1f6y_A 5-methyltetrahydrofolat 100.0 3.5E-55 1.2E-59 433.5 16.1 232 212-475 2-248 (262)
15 3k13_A 5-methyltetrahydrofolat 100.0 7.1E-51 2.4E-55 408.7 15.4 229 205-458 6-255 (300)
16 1q7z_A 5-methyltetrahydrofolat 100.0 3.2E-49 1.1E-53 428.2 17.7 237 204-477 309-559 (566)
17 3qbc_A 2-amino-4-hydroxy-6-hyd 100.0 6E-46 2E-50 340.1 11.7 140 41-180 2-142 (161)
18 1cbk_A Protein (7,8-dihydro-6- 100.0 2.8E-45 9.5E-50 335.9 13.8 138 43-180 1-139 (160)
19 1f9y_A HPPK, protein (6-hydrox 100.0 3.6E-45 1.2E-49 334.5 13.9 137 44-180 1-139 (158)
20 2qx0_A 7,8-dihydro-6-hydroxyme 100.0 2.5E-45 8.7E-50 335.8 11.7 138 43-180 1-140 (159)
21 3ip0_A 2-amino-4-hydroxy-6-hyd 100.0 1.6E-44 5.6E-49 330.6 13.9 136 45-180 2-139 (158)
22 2cg8_A Dihydroneopterin aldola 100.0 4.2E-44 1.4E-48 355.1 10.9 179 2-180 67-256 (270)
23 4djd_D C/Fe-SP, corrinoid/iron 100.0 1E-39 3.6E-44 329.8 19.7 232 209-473 53-318 (323)
24 4djd_C C/Fe-SP, corrinoid/iron 99.9 3.5E-24 1.2E-28 223.3 16.9 176 247-474 127-313 (446)
25 2h9a_A Carbon monoxide dehydro 99.9 1.8E-22 6.2E-27 212.2 19.1 202 208-473 89-311 (445)
26 3noy_A 4-hydroxy-3-methylbut-2 99.2 1.7E-09 5.8E-14 109.5 20.3 233 195-472 16-262 (366)
27 3nvt_A 3-deoxy-D-arabino-heptu 97.9 0.0011 3.9E-08 68.4 21.2 210 197-458 130-349 (385)
28 3vnd_A TSA, tryptophan synthas 97.8 0.0004 1.4E-08 68.3 15.9 182 230-458 28-236 (267)
29 1qop_A Tryptophan synthase alp 97.8 0.0014 4.8E-08 64.1 19.1 180 232-458 29-235 (268)
30 3nav_A Tryptophan synthase alp 97.8 0.00068 2.3E-08 66.8 16.8 184 230-458 30-238 (271)
31 2ekc_A AQ_1548, tryptophan syn 97.7 0.00078 2.7E-08 65.8 16.1 104 231-339 28-153 (262)
32 1vli_A Spore coat polysacchari 97.5 0.0026 8.9E-08 65.5 17.4 207 198-458 16-249 (385)
33 2ftp_A Hydroxymethylglutaryl-C 97.5 0.0052 1.8E-07 61.2 19.2 173 216-415 11-208 (302)
34 2cw6_A Hydroxymethylglutaryl-C 97.4 0.0032 1.1E-07 62.5 15.3 172 216-413 8-203 (298)
35 2wqp_A Polysialic acid capsule 97.4 0.011 3.8E-07 60.1 19.4 205 198-458 7-237 (349)
36 1vr6_A Phospho-2-dehydro-3-deo 97.4 0.063 2.1E-06 54.6 24.7 289 95-457 10-312 (350)
37 3ble_A Citramalate synthase fr 97.3 0.0021 7.2E-08 65.1 13.3 202 216-457 22-245 (337)
38 3f4w_A Putative hexulose 6 pho 97.2 0.00069 2.4E-08 63.3 7.4 148 230-416 9-165 (211)
39 1zco_A 2-dehydro-3-deoxyphosph 97.2 0.064 2.2E-06 52.3 21.6 205 197-457 12-229 (262)
40 1rd5_A Tryptophan synthase alp 97.1 0.012 4.2E-07 56.9 15.5 158 232-416 30-207 (262)
41 1ydn_A Hydroxymethylglutaryl-C 97.1 0.012 4E-07 58.3 15.5 174 216-414 7-203 (295)
42 1ydo_A HMG-COA lyase; TIM-barr 97.1 0.023 7.9E-07 56.7 17.7 165 216-406 9-195 (307)
43 1vs1_A 3-deoxy-7-phosphoheptul 97.0 0.17 5.9E-06 49.7 23.1 209 197-458 26-245 (276)
44 1nvm_A HOA, 4-hydroxy-2-oxoval 96.9 0.019 6.7E-07 58.1 16.0 189 228-457 24-226 (345)
45 1ujp_A Tryptophan synthase alp 96.9 0.01 3.5E-07 58.3 13.1 101 231-340 27-151 (271)
46 3tha_A Tryptophan synthase alp 96.8 0.022 7.4E-07 55.5 14.4 159 230-417 24-206 (252)
47 4g9p_A 4-hydroxy-3-methylbut-2 96.6 0.55 1.9E-05 48.3 23.4 243 196-472 9-285 (406)
48 1wa3_A 2-keto-3-deoxy-6-phosph 96.5 0.02 6.7E-07 53.0 11.4 90 231-338 19-109 (205)
49 2f6u_A GGGPS, (S)-3-O-geranylg 96.4 0.0094 3.2E-07 57.4 8.7 80 240-338 26-124 (234)
50 3ajx_A 3-hexulose-6-phosphate 96.4 0.055 1.9E-06 50.0 13.7 96 230-340 9-111 (207)
51 3ewb_X 2-isopropylmalate synth 96.3 0.076 2.6E-06 52.6 15.2 194 216-456 8-228 (293)
52 4h3d_A 3-dehydroquinate dehydr 96.3 0.065 2.2E-06 52.2 14.2 178 193-414 3-205 (258)
53 1o60_A 2-dehydro-3-deoxyphosph 96.3 0.21 7.2E-06 49.5 17.9 210 198-457 6-241 (292)
54 1geq_A Tryptophan synthase alp 96.2 0.25 8.4E-06 46.9 17.7 107 231-341 16-141 (248)
55 1rqb_A Transcarboxylase 5S sub 96.1 0.11 3.9E-06 55.7 16.4 186 230-457 43-252 (539)
56 3jr2_A Hexulose-6-phosphate sy 95.8 0.047 1.6E-06 51.4 10.4 147 230-416 15-172 (218)
57 3eeg_A 2-isopropylmalate synth 95.7 0.14 4.7E-06 51.5 13.9 182 228-456 22-229 (325)
58 2nx9_A Oxaloacetate decarboxyl 95.6 0.31 1.1E-05 51.4 16.8 186 230-457 26-233 (464)
59 1vhc_A Putative KHG/KDPG aldol 95.6 0.27 9.2E-06 46.8 14.8 88 232-338 27-115 (224)
60 3fs2_A 2-dehydro-3-deoxyphosph 95.4 1.6 5.4E-05 43.3 20.2 216 197-458 28-263 (298)
61 2qkf_A 3-deoxy-D-manno-octulos 95.4 0.83 2.8E-05 44.9 18.1 216 200-457 5-238 (280)
62 3tml_A 2-dehydro-3-deoxyphosph 95.3 1.2 4E-05 44.1 18.8 221 199-458 6-245 (288)
63 2ztj_A Homocitrate synthase; ( 95.1 0.94 3.2E-05 46.4 18.1 180 228-457 19-221 (382)
64 3o1n_A 3-dehydroquinate dehydr 94.9 0.14 4.7E-06 50.4 10.8 181 189-414 20-225 (276)
65 3sz8_A 2-dehydro-3-deoxyphosph 94.8 3.5 0.00012 40.6 21.0 195 231-458 31-244 (285)
66 1viz_A PCRB protein homolog; s 94.7 0.22 7.4E-06 48.0 11.4 81 239-338 25-117 (240)
67 3g8r_A Probable spore coat pol 94.6 1.3 4.5E-05 44.9 17.3 199 210-458 5-226 (350)
68 3w01_A Heptaprenylglyceryl pho 94.5 0.42 1.4E-05 45.9 12.7 79 241-338 30-120 (235)
69 3igs_A N-acetylmannosamine-6-p 94.5 1.3 4.3E-05 42.2 16.1 139 227-415 29-186 (232)
70 3q58_A N-acetylmannosamine-6-p 94.4 1.1 3.9E-05 42.5 15.4 139 227-415 29-186 (229)
71 3vzx_A Heptaprenylglyceryl pho 94.3 1.2 4.1E-05 42.5 15.2 165 241-458 25-209 (228)
72 3rmj_A 2-isopropylmalate synth 94.1 0.63 2.2E-05 47.5 13.9 180 228-456 28-235 (370)
73 3lab_A Putative KDPG (2-keto-3 93.9 0.14 4.9E-06 48.6 7.9 98 211-338 13-117 (217)
74 4e38_A Keto-hydroxyglutarate-a 93.9 0.25 8.5E-06 47.4 9.7 143 211-415 34-179 (232)
75 3fa4_A 2,3-dimethylmalate lyas 93.8 0.59 2E-05 46.5 12.6 136 230-393 91-244 (302)
76 1wbh_A KHG/KDPG aldolase; lyas 93.8 0.64 2.2E-05 43.7 12.3 98 211-338 16-114 (214)
77 3q58_A N-acetylmannosamine-6-p 93.8 0.39 1.3E-05 45.8 10.9 87 237-338 91-186 (229)
78 3ctl_A D-allulose-6-phosphate 93.8 0.76 2.6E-05 43.8 12.9 95 237-345 16-118 (231)
79 3ivs_A Homocitrate synthase, m 93.6 1.7 5.8E-05 45.2 16.2 193 216-457 42-255 (423)
80 3igs_A N-acetylmannosamine-6-p 93.6 0.45 1.5E-05 45.4 10.9 87 237-338 91-186 (232)
81 2yr1_A 3-dehydroquinate dehydr 93.4 1.5 5E-05 42.5 14.5 173 198-414 8-204 (257)
82 3inp_A D-ribulose-phosphate 3- 93.3 0.49 1.7E-05 45.7 10.8 99 235-345 41-146 (246)
83 3vav_A 3-methyl-2-oxobutanoate 93.1 1.1 3.9E-05 43.8 13.1 156 240-414 42-212 (275)
84 3bg3_A Pyruvate carboxylase, m 92.9 3.5 0.00012 45.6 18.2 184 231-457 122-337 (718)
85 2egz_A 3-dehydroquinate dehydr 92.8 1.9 6.7E-05 40.6 14.0 143 231-413 10-167 (219)
86 1mxs_A KDPG aldolase; 2-keto-3 92.8 1.5 5.1E-05 41.6 13.1 131 232-414 36-170 (225)
87 2ze3_A DFA0005; organic waste 92.5 1.7 5.8E-05 42.6 13.4 106 230-340 87-211 (275)
88 3eoo_A Methylisocitrate lyase; 92.2 1.5 5.1E-05 43.5 12.8 136 230-394 94-245 (298)
89 2nwr_A 2-dehydro-3-deoxyphosph 91.9 2.7 9.3E-05 40.9 14.1 195 231-457 14-224 (267)
90 1sfl_A 3-dehydroquinate dehydr 91.9 0.89 3E-05 43.5 10.4 150 232-414 15-190 (238)
91 2yw3_A 4-hydroxy-2-oxoglutarat 91.9 2.5 8.6E-05 39.3 13.3 84 234-338 25-109 (207)
92 3lye_A Oxaloacetate acetyl hyd 91.7 1.9 6.6E-05 42.9 12.9 136 230-393 99-252 (307)
93 1xky_A Dihydrodipicolinate syn 91.6 3.1 0.00011 41.0 14.3 114 219-341 21-146 (301)
94 1r30_A Biotin synthase; SAM ra 91.6 1.6 5.5E-05 43.9 12.5 136 229-406 97-232 (369)
95 3cu2_A Ribulose-5-phosphate 3- 91.5 2.3 7.9E-05 40.6 12.9 85 236-332 28-116 (237)
96 1xi3_A Thiamine phosphate pyro 91.5 3.1 0.00011 37.9 13.5 65 235-314 27-91 (215)
97 3dxi_A Putative aldolase; TIM 91.2 1.3 4.4E-05 44.4 11.1 182 229-456 19-217 (320)
98 3flu_A DHDPS, dihydrodipicolin 91.2 3.6 0.00012 40.4 14.3 115 218-341 15-141 (297)
99 3hgj_A Chromate reductase; TIM 91.1 0.73 2.5E-05 46.5 9.4 108 218-334 225-337 (349)
100 3si9_A DHDPS, dihydrodipicolin 91.1 3.5 0.00012 40.9 14.2 116 217-341 29-156 (315)
101 3usb_A Inosine-5'-monophosphat 91.1 0.89 3.1E-05 48.3 10.5 67 235-314 256-323 (511)
102 2v82_A 2-dehydro-3-deoxy-6-pho 91.0 5.3 0.00018 36.5 14.6 89 232-338 17-106 (212)
103 3b0p_A TRNA-dihydrouridine syn 90.7 0.75 2.6E-05 46.5 9.0 83 232-318 68-165 (350)
104 2y88_A Phosphoribosyl isomeras 90.7 1.1 3.7E-05 42.1 9.6 154 235-415 32-198 (244)
105 2r8w_A AGR_C_1641P; APC7498, d 90.5 3.8 0.00013 41.0 14.0 117 215-341 37-168 (332)
106 3cpr_A Dihydrodipicolinate syn 90.5 4.8 0.00016 39.6 14.5 113 219-341 25-150 (304)
107 3l21_A DHDPS, dihydrodipicolin 90.5 3.4 0.00012 40.8 13.4 115 218-341 23-149 (304)
108 3na8_A Putative dihydrodipicol 90.5 3.9 0.00013 40.6 13.9 115 218-341 32-158 (315)
109 2rfg_A Dihydrodipicolinate syn 90.5 2.7 9.2E-05 41.3 12.6 113 219-341 10-134 (297)
110 3tak_A DHDPS, dihydrodipicolin 90.4 4.2 0.00014 39.7 13.9 115 218-341 9-135 (291)
111 2ojp_A DHDPS, dihydrodipicolin 90.3 3.8 0.00013 40.1 13.5 114 219-341 10-135 (292)
112 1yxy_A Putative N-acetylmannos 90.2 0.96 3.3E-05 42.4 8.7 66 237-313 91-157 (234)
113 2wkj_A N-acetylneuraminate lya 90.1 3.9 0.00013 40.3 13.5 113 219-341 20-146 (303)
114 3qze_A DHDPS, dihydrodipicolin 90.0 3.7 0.00013 40.7 13.3 122 211-341 22-157 (314)
115 1jub_A Dihydroorotate dehydrog 90.0 0.89 3E-05 44.7 8.7 59 231-294 103-163 (311)
116 2v9d_A YAGE; dihydrodipicolini 90.0 4.1 0.00014 41.0 13.7 118 215-341 34-165 (343)
117 3m5v_A DHDPS, dihydrodipicolin 89.9 2.8 9.7E-05 41.2 12.2 114 218-341 16-142 (301)
118 1o66_A 3-methyl-2-oxobutanoate 89.8 6.4 0.00022 38.5 14.4 154 240-414 30-200 (275)
119 3iix_A Biotin synthetase, puta 89.4 3.9 0.00013 40.3 13.0 84 231-325 84-167 (348)
120 3gnh_A L-lysine, L-arginine ca 89.3 4.9 0.00017 39.7 13.7 101 228-338 161-267 (403)
121 2tps_A Protein (thiamin phosph 89.2 1.6 5.5E-05 40.4 9.4 84 236-334 33-116 (227)
122 4avf_A Inosine-5'-monophosphat 89.2 1.4 4.6E-05 46.7 9.8 67 235-314 229-296 (490)
123 3gr7_A NADPH dehydrogenase; fl 89.1 0.63 2.1E-05 46.9 6.9 108 218-334 215-326 (340)
124 4fxs_A Inosine-5'-monophosphat 89.0 1.8 6.1E-05 45.8 10.6 67 235-314 231-298 (496)
125 2vc6_A MOSA, dihydrodipicolina 89.0 3.4 0.00012 40.4 12.0 114 218-341 9-134 (292)
126 3kws_A Putative sugar isomeras 89.0 15 0.00053 34.6 17.1 138 231-406 38-188 (287)
127 3ih1_A Methylisocitrate lyase; 88.9 7.1 0.00024 38.7 14.2 145 231-406 101-261 (305)
128 1y0e_A Putative N-acetylmannos 88.8 9.4 0.00032 35.0 14.4 138 229-415 18-180 (223)
129 3e96_A Dihydrodipicolinate syn 88.7 2.8 9.6E-05 41.6 11.3 114 219-341 20-145 (316)
130 2inf_A URO-D, UPD, uroporphyri 88.6 4.2 0.00014 40.7 12.6 148 236-405 195-344 (359)
131 3fkr_A L-2-keto-3-deoxyarabona 88.5 5.5 0.00019 39.3 13.2 114 219-341 17-145 (309)
132 3eb2_A Putative dihydrodipicol 88.5 4.7 0.00016 39.6 12.7 115 219-342 13-139 (300)
133 1yxy_A Putative N-acetylmannos 88.5 4.1 0.00014 38.0 11.7 82 235-338 37-138 (234)
134 1m3u_A 3-methyl-2-oxobutanoate 88.4 8.3 0.00028 37.5 14.0 156 240-414 30-200 (264)
135 1vzw_A Phosphoribosyl isomeras 88.3 1.1 3.9E-05 42.1 7.8 151 235-415 33-195 (244)
136 3d0c_A Dihydrodipicolinate syn 88.3 4.9 0.00017 39.8 12.7 112 219-340 20-144 (314)
137 1f6k_A N-acetylneuraminate lya 88.3 5.5 0.00019 38.9 12.9 113 219-341 12-138 (293)
138 3ovp_A Ribulose-phosphate 3-ep 88.1 2.8 9.5E-05 39.7 10.3 95 235-340 18-119 (228)
139 1ep3_A Dihydroorotate dehydrog 88.0 0.56 1.9E-05 45.9 5.5 78 232-314 109-194 (311)
140 3b4u_A Dihydrodipicolinate syn 87.9 5.6 0.00019 38.9 12.8 113 219-341 12-141 (294)
141 3a5f_A Dihydrodipicolinate syn 87.9 5.4 0.00019 38.9 12.6 113 219-341 11-135 (291)
142 2yxg_A DHDPS, dihydrodipicolin 87.9 5.3 0.00018 38.9 12.5 112 219-341 10-134 (289)
143 3rys_A Adenosine deaminase 1; 87.7 12 0.00042 37.4 15.3 134 235-405 153-298 (343)
144 2nx9_A Oxaloacetate decarboxyl 87.6 1.8 6.1E-05 45.6 9.4 80 223-315 148-232 (464)
145 3khj_A Inosine-5-monophosphate 87.5 1.6 5.4E-05 44.4 8.6 64 237-314 107-171 (361)
146 3oix_A Putative dihydroorotate 87.4 2.7 9.3E-05 42.4 10.3 82 231-317 138-228 (345)
147 2hmc_A AGR_L_411P, dihydrodipi 87.3 5 0.00017 40.4 12.2 116 215-341 29-159 (344)
148 2w6r_A Imidazole glycerol phos 87.3 2.5 8.6E-05 40.2 9.6 88 235-333 31-124 (266)
149 3t7v_A Methylornithine synthas 87.1 6 0.00021 39.2 12.7 136 231-406 91-226 (350)
150 3daq_A DHDPS, dihydrodipicolin 87.0 5.6 0.00019 38.9 12.1 113 219-341 12-136 (292)
151 1ps9_A 2,4-dienoyl-COA reducta 86.9 0.63 2.2E-05 50.8 5.7 105 219-331 215-325 (671)
152 1h1y_A D-ribulose-5-phosphate 86.9 3.2 0.00011 38.8 10.0 97 233-340 18-120 (228)
153 3l5l_A Xenobiotic reductase A; 86.9 0.65 2.2E-05 47.1 5.4 107 220-334 233-344 (363)
154 1o5k_A DHDPS, dihydrodipicolin 86.7 5.8 0.0002 39.1 12.1 114 218-341 21-146 (306)
155 2ehh_A DHDPS, dihydrodipicolin 86.7 5.8 0.0002 38.8 12.1 112 219-341 10-134 (294)
156 2r8c_A Putative amidohydrolase 86.6 4.1 0.00014 41.0 11.3 97 231-337 172-274 (426)
157 3dz1_A Dihydrodipicolinate syn 86.6 7.1 0.00024 38.6 12.7 112 218-341 16-142 (313)
158 1z41_A YQJM, probable NADH-dep 86.5 3.8 0.00013 40.9 10.8 59 234-295 144-215 (338)
159 3ozy_A Putative mandelate race 86.4 18 0.00061 36.6 16.0 94 231-338 150-252 (389)
160 2z6i_A Trans-2-enoyl-ACP reduc 86.4 13 0.00045 36.7 14.7 131 240-415 29-167 (332)
161 1z41_A YQJM, probable NADH-dep 86.3 1.9 6.7E-05 43.0 8.5 105 218-331 215-322 (338)
162 2qf7_A Pyruvate carboxylase pr 86.3 3.3 0.00011 48.4 11.5 191 230-457 569-784 (1165)
163 3cyv_A URO-D, UPD, uroporphyri 86.2 8.9 0.00031 38.1 13.4 148 236-404 189-342 (354)
164 3cqj_A L-ribulose-5-phosphate 86.2 5.7 0.0002 37.8 11.5 74 324-406 112-186 (295)
165 2ovl_A Putative racemase; stru 86.2 25 0.00086 35.1 16.8 97 231-339 145-248 (371)
166 1h5y_A HISF; histidine biosynt 85.9 2.6 9E-05 39.1 8.8 90 234-334 33-125 (253)
167 3r2g_A Inosine 5'-monophosphat 85.8 2.1 7.2E-05 43.6 8.5 68 234-314 99-167 (361)
168 2pgw_A Muconate cycloisomerase 85.8 6.1 0.00021 39.9 12.1 94 231-338 146-246 (384)
169 4e38_A Keto-hydroxyglutarate-a 85.7 3.2 0.00011 39.6 9.3 86 237-344 96-183 (232)
170 3rr1_A GALD, putative D-galact 85.6 6.2 0.00021 40.5 12.1 105 231-339 124-235 (405)
171 3glc_A Aldolase LSRF; TIM barr 85.3 18 0.00061 35.6 14.8 111 240-380 131-252 (295)
172 1vyr_A Pentaerythritol tetrani 85.3 4.2 0.00015 41.1 10.5 105 233-339 160-300 (364)
173 1jcn_A Inosine monophosphate d 85.2 2.9 0.0001 44.1 9.7 66 236-314 256-322 (514)
174 3gr7_A NADPH dehydrogenase; fl 85.1 8.4 0.00029 38.5 12.5 103 235-340 145-284 (340)
175 2rdx_A Mandelate racemase/muco 85.0 23 0.00079 35.5 15.9 143 232-416 145-294 (379)
176 2o56_A Putative mandelate race 85.0 28 0.00097 35.1 16.7 108 229-338 149-271 (407)
177 3qc0_A Sugar isomerase; TIM ba 85.0 13 0.00043 34.6 13.2 76 323-406 86-168 (275)
178 3h5d_A DHDPS, dihydrodipicolin 84.9 7.6 0.00026 38.4 11.9 116 218-341 15-142 (311)
179 2ox4_A Putative mandelate race 84.8 12 0.0004 38.0 13.7 109 229-338 143-265 (403)
180 1qtw_A Endonuclease IV; DNA re 84.8 25 0.00086 32.7 15.6 72 324-406 93-168 (285)
181 3bo9_A Putative nitroalkan dio 84.7 21 0.00071 35.3 15.1 108 276-415 67-181 (326)
182 1xg4_A Probable methylisocitra 84.5 12 0.00042 36.8 13.2 106 230-341 89-211 (295)
183 4ay7_A Methylcobalamin\: coenz 84.5 20 0.0007 35.4 15.1 147 234-404 190-340 (348)
184 1rpx_A Protein (ribulose-phosp 84.3 8 0.00027 35.9 11.3 95 233-340 22-125 (230)
185 2eja_A URO-D, UPD, uroporphyri 84.2 12 0.00042 36.8 13.3 147 235-405 180-330 (338)
186 1eep_A Inosine 5'-monophosphat 84.2 1.9 6.4E-05 44.2 7.3 67 236-315 154-221 (404)
187 4exq_A UPD, URO-D, uroporphyri 83.9 8 0.00027 39.1 11.9 149 234-403 197-351 (368)
188 1j93_A UROD, uroporphyrinogen 83.9 6.3 0.00021 39.2 11.0 148 236-405 195-346 (353)
189 4ef8_A Dihydroorotate dehydrog 83.8 2.6 8.8E-05 42.7 8.1 58 232-294 137-198 (354)
190 2nuw_A 2-keto-3-deoxygluconate 83.7 10 0.00035 36.9 12.1 112 219-341 8-131 (288)
191 1thf_D HISF protein; thermophI 83.4 6.6 0.00023 36.8 10.4 89 235-334 31-122 (253)
192 3tva_A Xylose isomerase domain 83.2 21 0.00071 33.6 14.0 69 323-405 105-173 (290)
193 1tqx_A D-ribulose-5-phosphate 83.1 6.2 0.00021 37.3 10.0 162 236-456 20-200 (227)
194 1tqj_A Ribulose-phosphate 3-ep 83.0 4 0.00014 38.5 8.6 99 233-341 16-120 (230)
195 3s5o_A 4-hydroxy-2-oxoglutarat 83.0 7.3 0.00025 38.4 10.9 121 211-341 13-150 (307)
196 4dpp_A DHDPS 2, dihydrodipicol 82.7 7.4 0.00025 39.5 10.9 112 218-341 67-191 (360)
197 2p8b_A Mandelate racemase/muco 82.6 23 0.00079 35.3 14.7 94 232-338 141-242 (369)
198 3qfe_A Putative dihydrodipicol 82.4 8.6 0.00029 38.1 11.2 116 218-342 18-148 (318)
199 1w3i_A EDA, 2-keto-3-deoxy glu 82.3 13 0.00045 36.2 12.3 112 219-341 8-131 (293)
200 1oy0_A Ketopantoate hydroxymet 82.2 14 0.00049 36.1 12.4 152 240-414 47-218 (281)
201 3qxb_A Putative xylose isomera 82.1 15 0.00052 35.4 12.7 78 324-406 118-200 (316)
202 3rcy_A Mandelate racemase/muco 82.0 13 0.00045 38.4 12.9 107 230-339 144-260 (433)
203 3hgj_A Chromate reductase; TIM 81.9 10 0.00034 38.0 11.6 81 235-316 153-259 (349)
204 3ffs_A Inosine-5-monophosphate 81.9 3.5 0.00012 42.5 8.3 64 237-314 146-210 (400)
205 3feq_A Putative amidohydrolase 81.4 4.7 0.00016 40.2 9.0 98 231-337 169-271 (423)
206 3r4e_A Mandelate racemase/muco 81.4 11 0.00039 38.6 12.0 108 231-339 142-277 (418)
207 2hjp_A Phosphonopyruvate hydro 81.3 35 0.0012 33.4 15.0 107 230-341 86-213 (290)
208 3sbf_A Mandelate racemase / mu 80.5 12 0.0004 38.2 11.7 106 231-338 132-257 (401)
209 3kru_A NADH:flavin oxidoreduct 80.5 3.7 0.00012 41.4 7.7 103 218-330 216-321 (343)
210 3q45_A Mandelate racemase/muco 80.3 49 0.0017 33.0 16.2 95 231-338 139-240 (368)
211 2qjg_A Putative aldolase MJ040 80.3 22 0.00074 33.7 12.9 89 238-339 103-208 (273)
212 1p1j_A Inositol-3-phosphate sy 80.3 5.9 0.0002 42.0 9.3 125 233-385 220-347 (533)
213 1icp_A OPR1, 12-oxophytodienoa 80.2 9.5 0.00033 38.7 10.8 105 233-339 166-307 (376)
214 1mzh_A Deoxyribose-phosphate a 80.1 9.3 0.00032 35.8 10.0 97 233-339 69-181 (225)
215 1f76_A Dihydroorotate dehydrog 80.0 2.9 9.8E-05 41.5 6.7 48 233-284 152-200 (336)
216 1gte_A Dihydropyrimidine dehyd 80.0 3.7 0.00012 47.2 8.4 80 232-314 646-733 (1025)
217 2fiq_A Putative tagatose 6-pho 80.0 8 0.00027 40.1 10.1 104 290-402 15-142 (420)
218 1rqb_A Transcarboxylase 5S sub 79.9 6.8 0.00023 41.9 9.9 88 212-315 159-251 (539)
219 2r14_A Morphinone reductase; H 79.7 12 0.00041 38.0 11.3 105 233-339 165-305 (377)
220 3hbl_A Pyruvate carboxylase; T 79.6 25 0.00085 41.0 15.3 193 231-457 552-767 (1150)
221 3aal_A Probable endonuclease 4 79.6 22 0.00074 34.0 12.8 139 232-406 19-172 (303)
222 4adt_A Pyridoxine biosynthetic 79.4 1.2 4.1E-05 44.1 3.6 89 238-338 32-130 (297)
223 3be7_A Zn-dependent arginine c 79.3 23 0.00078 34.9 13.2 97 231-337 163-265 (408)
224 1wa3_A 2-keto-3-deoxy-6-phosph 79.3 4 0.00014 37.1 7.0 55 239-314 75-129 (205)
225 4e5t_A Mandelate racemase / mu 79.2 47 0.0016 33.7 15.7 108 230-338 149-264 (404)
226 1f76_A Dihydroorotate dehydrog 79.1 5.3 0.00018 39.5 8.4 87 231-318 222-320 (336)
227 3qja_A IGPS, indole-3-glycerol 78.9 31 0.0011 33.3 13.6 90 235-338 73-167 (272)
228 3tji_A Mandelate racemase/muco 78.9 13 0.00046 38.1 11.6 107 231-339 153-279 (422)
229 2r91_A 2-keto-3-deoxy-(6-phosp 78.7 20 0.00068 34.7 12.2 111 219-341 8-130 (286)
230 1xla_A D-xylose isomerase; iso 78.6 11 0.00038 38.0 10.7 79 323-406 119-205 (394)
231 2gl5_A Putative dehydratase pr 78.4 60 0.002 32.7 16.5 108 230-338 148-274 (410)
232 1r3s_A URO-D, uroporphyrinogen 78.4 15 0.00053 36.7 11.7 147 236-404 199-354 (367)
233 1rvk_A Isomerase/lactonizing e 78.2 30 0.001 34.6 13.8 104 230-339 147-257 (382)
234 1of8_A Phospho-2-dehydro-3-deo 78.2 28 0.00095 35.4 13.3 100 231-338 79-200 (370)
235 2x7v_A Probable endonuclease 4 78.0 29 0.00098 32.4 12.9 72 323-406 92-167 (287)
236 2c6q_A GMP reductase 2; TIM ba 78.0 8.2 0.00028 38.8 9.4 67 238-314 173-250 (351)
237 1k77_A EC1530, hypothetical pr 77.8 7.3 0.00025 36.1 8.5 75 323-406 88-168 (260)
238 1y0e_A Putative N-acetylmannos 77.5 7.5 0.00026 35.7 8.4 66 238-315 79-145 (223)
239 1a0c_A Xylose isomerase; ketol 77.4 26 0.00087 36.3 13.2 79 324-406 171-256 (438)
240 1u1j_A 5-methyltetrahydroptero 77.4 24 0.00081 39.3 13.7 156 235-405 586-749 (765)
241 4dwd_A Mandelate racemase/muco 77.3 26 0.00088 35.6 13.1 103 230-338 137-247 (393)
242 1xim_A D-xylose isomerase; iso 77.2 50 0.0017 33.1 15.2 79 323-406 119-205 (393)
243 3tsm_A IGPS, indole-3-glycerol 77.1 55 0.0019 31.7 16.1 89 236-338 81-174 (272)
244 3stp_A Galactonate dehydratase 77.1 14 0.00049 37.9 11.1 102 232-339 179-287 (412)
245 4fo4_A Inosine 5'-monophosphat 77.0 6 0.00021 40.2 8.1 74 239-319 162-243 (366)
246 1yad_A Regulatory protein TENI 76.9 44 0.0015 30.4 15.0 133 238-415 33-169 (221)
247 3eez_A Putative mandelate race 76.7 32 0.0011 34.6 13.5 92 231-338 144-242 (378)
248 2gou_A Oxidoreductase, FMN-bin 76.5 7.9 0.00027 39.1 8.8 82 234-317 161-271 (365)
249 3lab_A Putative KDPG (2-keto-3 76.3 7.5 0.00026 36.7 8.0 87 238-345 76-169 (217)
250 3gka_A N-ethylmaleimide reduct 76.3 4.7 0.00016 40.9 7.1 96 218-331 233-331 (361)
251 2q02_A Putative cytoplasmic pr 76.2 48 0.0016 30.5 14.1 23 231-256 19-41 (272)
252 2e6f_A Dihydroorotate dehydrog 76.1 3.6 0.00012 40.2 6.1 60 231-295 103-166 (314)
253 1ypf_A GMP reductase; GUAC, pu 76.1 11 0.00038 37.5 9.7 68 235-315 106-176 (336)
254 3tsm_A IGPS, indole-3-glycerol 76.1 32 0.0011 33.3 12.7 90 239-344 134-229 (272)
255 1bxb_A Xylose isomerase; xylos 75.8 41 0.0014 33.6 14.1 79 323-406 119-205 (387)
256 2qiw_A PEP phosphonomutase; st 75.8 8 0.00027 37.3 8.3 98 237-340 96-211 (255)
257 1i60_A IOLI protein; beta barr 75.8 9.5 0.00032 35.5 8.7 75 323-406 87-164 (278)
258 1r0m_A N-acylamino acid racema 75.7 30 0.001 34.5 13.0 91 231-338 147-244 (375)
259 3m0z_A Putative aldolase; MCSG 75.6 45 0.0015 31.7 12.9 174 211-432 37-234 (249)
260 3v3w_A Starvation sensing prot 75.3 25 0.00086 36.1 12.4 108 231-339 148-283 (424)
261 1q6o_A Humps, 3-keto-L-gulonat 75.1 42 0.0014 30.7 12.9 90 231-336 13-109 (216)
262 3aty_A Tcoye, prostaglandin F2 74.9 16 0.00055 37.1 10.7 102 237-340 177-314 (379)
263 4ab4_A Xenobiotic reductase B; 74.4 5.6 0.00019 40.3 7.1 96 218-331 225-323 (362)
264 1vhn_A Putative flavin oxidore 74.4 3.7 0.00013 40.6 5.6 78 232-313 69-157 (318)
265 3iar_A Adenosine deaminase; pu 74.3 8.6 0.00029 39.0 8.4 140 233-405 159-310 (367)
266 2hk0_A D-psicose 3-epimerase; 74.2 61 0.0021 30.8 16.2 76 323-406 110-193 (309)
267 2qgy_A Enolase from the enviro 74.2 34 0.0012 34.5 12.9 96 231-338 148-250 (391)
268 4adt_A Pyridoxine biosynthetic 74.0 5.6 0.00019 39.3 6.7 61 237-314 90-150 (297)
269 3t6c_A RSPA, putative MAND fam 74.0 27 0.00093 36.1 12.3 106 231-338 154-296 (440)
270 1zlp_A PSR132, petal death pro 73.7 51 0.0017 32.7 13.7 105 230-340 112-232 (318)
271 4fo4_A Inosine 5'-monophosphat 73.7 8.6 0.00029 39.0 8.2 67 236-315 109-176 (366)
272 3jva_A Dipeptide epimerase; en 73.6 25 0.00085 35.0 11.7 95 231-338 138-239 (354)
273 3dx5_A Uncharacterized protein 73.6 16 0.00056 34.3 9.9 75 323-406 87-162 (286)
274 1mzh_A Deoxyribose-phosphate a 73.4 14 0.00049 34.5 9.3 71 231-313 129-201 (225)
275 1nvm_A HOA, 4-hydroxy-2-oxoval 73.3 11 0.00037 37.7 8.9 76 231-316 146-226 (345)
276 3tdn_A FLR symmetric alpha-bet 73.1 5.7 0.00019 37.4 6.4 89 235-334 36-127 (247)
277 1to3_A Putative aldolase YIHT; 73.1 33 0.0011 33.7 12.2 114 240-380 114-249 (304)
278 2c6q_A GMP reductase 2; TIM ba 72.9 20 0.00069 35.9 10.8 65 236-313 119-186 (351)
279 2zvr_A Uncharacterized protein 72.8 31 0.0011 32.5 11.7 40 214-256 23-63 (290)
280 1vzw_A Phosphoribosyl isomeras 72.6 12 0.00041 34.9 8.5 86 239-339 89-196 (244)
281 2gou_A Oxidoreductase, FMN-bin 72.5 12 0.0004 37.8 8.9 102 218-331 233-337 (365)
282 4fxs_A Inosine-5'-monophosphat 72.5 9.9 0.00034 40.1 8.7 70 238-314 284-361 (496)
283 1s2w_A Phosphoenolpyruvate pho 72.4 75 0.0026 31.0 16.0 108 230-341 90-217 (295)
284 3b8i_A PA4872 oxaloacetate dec 72.4 39 0.0013 33.1 12.3 106 230-343 93-213 (287)
285 3ngf_A AP endonuclease, family 72.4 11 0.00038 35.3 8.3 74 323-406 96-175 (269)
286 1muw_A Xylose isomerase; atomi 72.3 45 0.0015 33.3 13.3 79 323-406 119-205 (386)
287 4ab4_A Xenobiotic reductase B; 72.2 31 0.0011 34.8 12.0 101 236-339 155-285 (362)
288 1tv5_A Dhodehase, dihydroorota 72.1 16 0.00056 37.9 10.1 47 233-282 196-242 (443)
289 3aam_A Endonuclease IV, endoiv 72.0 62 0.0021 29.9 14.0 65 324-405 92-161 (270)
290 2qgq_A Protein TM_1862; alpha- 72.0 24 0.0008 34.3 10.8 138 229-406 31-180 (304)
291 2oz8_A MLL7089 protein; struct 72.0 80 0.0027 31.6 15.1 96 231-338 144-249 (389)
292 3gka_A N-ethylmaleimide reduct 71.9 31 0.0011 34.7 11.9 104 234-340 161-294 (361)
293 2og9_A Mandelate racemase/muco 71.8 21 0.00073 36.0 10.8 98 231-340 161-265 (393)
294 1nu5_A Chloromuconate cycloiso 71.7 39 0.0013 33.6 12.6 95 232-338 142-244 (370)
295 2qs8_A XAA-Pro dipeptidase; am 71.5 38 0.0013 33.5 12.5 97 231-337 173-275 (418)
296 3qvs_A MIPS, MYO-inositol-1-ph 71.4 9.2 0.00031 39.2 7.7 95 233-338 127-223 (392)
297 1ydo_A HMG-COA lyase; TIM-barr 70.9 10 0.00035 37.4 7.9 78 227-316 151-233 (307)
298 3l5l_A Xenobiotic reductase A; 70.8 20 0.00069 36.0 10.2 58 236-294 160-230 (363)
299 1w8s_A FBP aldolase, fructose- 70.7 61 0.0021 30.9 13.2 113 239-380 97-226 (263)
300 2pp0_A L-talarate/galactarate 70.6 23 0.00078 35.9 10.7 97 231-339 174-277 (398)
301 3ktc_A Xylose isomerase; putat 70.6 24 0.00082 34.3 10.6 41 213-255 11-55 (333)
302 2ftp_A Hydroxymethylglutaryl-C 70.6 16 0.00055 35.7 9.2 76 230-316 155-235 (302)
303 1sjd_A N-acylamino acid racema 70.5 63 0.0022 32.0 13.9 145 231-417 140-291 (368)
304 3khj_A Inosine-5-monophosphate 70.3 10 0.00035 38.4 7.8 71 239-319 158-239 (361)
305 1p0k_A Isopentenyl-diphosphate 70.2 6.1 0.00021 39.4 6.2 67 243-315 136-208 (349)
306 1jvn_A Glutamine, bifunctional 70.2 7.2 0.00025 41.7 7.1 21 236-256 349-369 (555)
307 3oa3_A Aldolase; structural ge 70.1 12 0.00043 36.7 8.1 119 210-343 109-242 (288)
308 2poz_A Putative dehydratase; o 70.0 75 0.0026 31.8 14.4 107 231-338 136-255 (392)
309 4avf_A Inosine-5'-monophosphat 70.0 8.9 0.0003 40.4 7.6 74 238-318 282-363 (490)
310 3cny_A Inositol catabolism pro 69.8 30 0.001 32.5 10.8 150 229-415 29-189 (301)
311 1mdl_A Mandelate racemase; iso 69.8 32 0.0011 34.1 11.4 97 231-339 143-246 (359)
312 1vyr_A Pentaerythritol tetrani 69.6 15 0.00051 37.1 8.9 89 231-331 248-338 (364)
313 1tzz_A Hypothetical protein L1 69.5 36 0.0012 34.3 11.8 96 231-338 164-266 (392)
314 3lot_A Uncharacterized protein 69.4 6.7 0.00023 39.1 6.1 60 231-297 29-88 (314)
315 1ps9_A 2,4-dienoyl-COA reducta 69.2 15 0.00051 39.8 9.5 80 234-314 141-246 (671)
316 2zad_A Muconate cycloisomerase 69.1 55 0.0019 32.2 12.9 93 232-338 139-240 (345)
317 4e4u_A Mandalate racemase/muco 69.1 19 0.00066 36.8 9.8 107 231-338 143-257 (412)
318 2z6i_A Trans-2-enoyl-ACP reduc 69.0 14 0.00048 36.5 8.4 57 238-314 79-135 (332)
319 3i4k_A Muconate lactonizing en 68.9 99 0.0034 31.0 16.1 96 231-338 147-250 (383)
320 3ro6_B Putative chloromuconate 68.7 15 0.00051 36.7 8.7 95 231-338 139-240 (356)
321 2cw6_A Hydroxymethylglutaryl-C 68.6 22 0.00074 34.6 9.7 78 226-315 149-231 (298)
322 3vkj_A Isopentenyl-diphosphate 68.6 13 0.00044 37.8 8.2 77 232-318 136-219 (368)
323 1tv5_A Dhodehase, dihydroorota 68.5 18 0.00062 37.6 9.5 83 231-314 308-400 (443)
324 1vrd_A Inosine-5'-monophosphat 68.5 18 0.0006 37.8 9.5 67 240-314 292-367 (494)
325 1jcn_A Inosine monophosphate d 68.5 9.2 0.00031 40.3 7.4 75 238-319 308-390 (514)
326 3vcn_A Mannonate dehydratase; 68.2 23 0.00079 36.4 10.2 109 231-340 149-285 (425)
327 2qde_A Mandelate racemase/muco 67.9 30 0.001 35.0 10.9 94 232-338 145-245 (397)
328 2qul_A D-tagatose 3-epimerase; 67.8 78 0.0027 29.3 14.1 141 231-406 17-175 (290)
329 2qq6_A Mandelate racemase/muco 67.5 45 0.0016 33.7 12.2 108 231-339 148-267 (410)
330 1ka9_F Imidazole glycerol phos 67.4 19 0.00066 33.5 8.7 85 235-333 32-122 (252)
331 3rpd_A Methionine synthase (B1 67.4 56 0.0019 32.8 12.6 142 238-406 175-342 (357)
332 1o66_A 3-methyl-2-oxobutanoate 67.3 26 0.0009 34.1 9.7 90 231-341 92-204 (275)
333 3iwp_A Copper homeostasis prot 67.1 51 0.0017 32.3 11.8 140 240-416 52-215 (287)
334 3m6y_A 4-hydroxy-2-oxoglutarat 67.0 43 0.0015 32.2 10.8 172 211-432 59-257 (275)
335 2r14_A Morphinone reductase; H 66.9 12 0.0004 38.1 7.5 102 219-331 239-343 (377)
336 3txv_A Probable tagatose 6-pho 66.8 20 0.00067 37.5 9.2 93 290-391 22-135 (450)
337 4gj1_A 1-(5-phosphoribosyl)-5- 66.8 7.2 0.00024 37.1 5.6 155 236-424 33-212 (243)
338 2nv1_A Pyridoxal biosynthesis 66.7 11 0.00037 36.8 7.1 67 238-314 32-105 (305)
339 1qo2_A Molecule: N-((5-phospho 66.7 3.2 0.00011 39.0 3.1 142 235-416 31-194 (241)
340 2y7e_A 3-keto-5-aminohexanoate 66.6 10 0.00036 37.1 6.8 125 231-390 31-155 (282)
341 3hbl_A Pyruvate carboxylase; T 66.6 29 0.001 40.4 11.6 110 211-332 668-787 (1150)
342 3toy_A Mandelate racemase/muco 66.3 63 0.0022 32.5 12.9 96 231-338 166-269 (383)
343 2zc8_A N-acylamino acid racema 66.1 44 0.0015 33.2 11.6 90 232-338 141-237 (369)
344 1m3u_A 3-methyl-2-oxobutanoate 65.8 31 0.0011 33.4 9.9 90 231-341 91-204 (264)
345 3ngf_A AP endonuclease, family 65.8 84 0.0029 29.1 13.0 87 300-389 27-115 (269)
346 1n8f_A DAHP synthetase; (beta/ 65.4 45 0.0016 33.6 11.3 102 231-338 64-185 (350)
347 3l5a_A NADH/flavin oxidoreduct 65.1 46 0.0016 34.2 11.7 81 237-318 173-286 (419)
348 4e4f_A Mannonate dehydratase; 65.0 42 0.0014 34.4 11.4 108 231-339 148-285 (426)
349 2y88_A Phosphoribosyl isomeras 65.0 24 0.00083 32.6 8.9 86 239-339 88-199 (244)
350 3ayv_A Putative uncharacterize 65.0 16 0.00054 33.8 7.6 83 323-415 79-161 (254)
351 3c6c_A 3-keto-5-aminohexanoate 64.9 19 0.00066 35.8 8.4 60 231-296 45-104 (316)
352 3ffs_A Inosine-5-monophosphate 64.9 23 0.00078 36.4 9.2 73 238-317 196-276 (400)
353 1i4n_A Indole-3-glycerol phosp 64.7 19 0.00064 34.6 8.1 59 240-313 116-175 (251)
354 1vhc_A Putative KHG/KDPG aldol 64.3 15 0.00052 34.5 7.2 84 238-344 80-166 (224)
355 1ypf_A GMP reductase; GUAC, pu 64.1 26 0.0009 34.7 9.4 73 238-317 161-240 (336)
356 3aty_A Tcoye, prostaglandin F2 63.9 16 0.00054 37.1 7.8 101 217-331 248-351 (379)
357 1eep_A Inosine 5'-monophosphat 63.8 23 0.00078 36.0 9.0 71 238-316 206-285 (404)
358 2qf7_A Pyruvate carboxylase pr 63.7 20 0.0007 41.8 9.6 92 211-315 686-783 (1165)
359 1ydn_A Hydroxymethylglutaryl-C 63.6 19 0.00064 34.9 8.0 88 212-315 135-230 (295)
360 3e49_A Uncharacterized protein 63.2 7 0.00024 38.9 4.9 59 231-296 29-87 (311)
361 3bo9_A Putative nitroalkan dio 63.1 26 0.0009 34.5 9.1 58 237-314 92-149 (326)
362 1vrd_A Inosine-5'-monophosphat 63.1 17 0.00059 37.8 8.2 67 235-314 237-304 (494)
363 3usb_A Inosine-5'-monophosphat 63.0 24 0.00082 37.2 9.3 70 238-314 309-386 (511)
364 1gox_A (S)-2-hydroxy-acid oxid 62.8 15 0.0005 37.1 7.3 27 232-258 134-160 (370)
365 3tqp_A Enolase; energy metabol 62.8 15 0.00053 37.9 7.6 116 210-345 238-370 (428)
366 1ub3_A Aldolase protein; schif 62.7 27 0.00091 32.8 8.6 115 210-338 54-181 (220)
367 2oz8_A MLL7089 protein; struct 62.6 20 0.0007 36.1 8.4 90 231-339 201-296 (389)
368 3e02_A Uncharacterized protein 62.6 6.3 0.00021 39.2 4.4 59 231-296 29-87 (311)
369 3tj4_A Mandelate racemase; eno 62.5 66 0.0023 32.1 12.1 97 231-339 150-254 (372)
370 3ble_A Citramalate synthase fr 62.3 26 0.00089 34.8 9.0 80 224-315 160-244 (337)
371 3sjn_A Mandelate racemase/muco 62.3 42 0.0014 33.7 10.6 97 232-338 146-250 (374)
372 1kbi_A Cytochrome B2, L-LCR; f 62.3 43 0.0015 35.4 11.0 74 238-314 355-430 (511)
373 2zbt_A Pyridoxal biosynthesis 62.2 7.6 0.00026 37.7 4.9 69 237-317 31-107 (297)
374 3k30_A Histamine dehydrogenase 62.0 16 0.00054 39.8 7.9 104 217-331 229-339 (690)
375 2nzl_A Hydroxyacid oxidase 1; 62.0 33 0.0011 34.9 9.8 68 239-314 265-334 (392)
376 2nql_A AGR_PAT_674P, isomerase 61.8 58 0.002 32.7 11.6 95 231-338 163-264 (388)
377 2p10_A MLL9387 protein; putati 61.7 28 0.00097 34.1 8.7 74 238-313 174-256 (286)
378 3bw2_A 2-nitropropane dioxygen 61.1 18 0.00061 36.3 7.5 58 238-314 113-170 (369)
379 2hzg_A Mandelate racemase/muco 61.0 37 0.0013 34.3 10.0 96 232-339 145-253 (401)
380 3q45_A Mandelate racemase/muco 60.9 29 0.001 34.7 9.1 93 230-341 194-294 (368)
381 3ugv_A Enolase; enzyme functio 60.9 71 0.0024 32.2 12.1 97 231-339 170-276 (390)
382 3bjs_A Mandelate racemase/muco 60.8 39 0.0013 34.6 10.3 94 232-338 184-286 (428)
383 1h5y_A HISF; histidine biosynt 60.8 21 0.00072 32.8 7.5 87 239-339 91-204 (253)
384 3ewb_X 2-isopropylmalate synth 60.7 29 0.00099 33.8 8.8 82 226-317 143-230 (293)
385 3fa4_A 2,3-dimethylmalate lyas 60.7 6.8 0.00023 38.8 4.2 36 216-255 156-191 (302)
386 3o07_A Pyridoxine biosynthesis 60.6 3.2 0.00011 40.8 1.8 62 237-315 80-141 (291)
387 3vni_A Xylose isomerase domain 60.6 1.1E+02 0.0037 28.5 16.9 141 232-406 18-174 (294)
388 2gjl_A Hypothetical protein PA 60.4 20 0.00068 35.2 7.7 57 238-314 87-143 (328)
389 2hxt_A L-fuconate dehydratase; 60.3 77 0.0026 32.4 12.4 95 231-339 197-300 (441)
390 3vav_A 3-methyl-2-oxobutanoate 60.2 46 0.0016 32.4 10.0 91 230-341 102-216 (275)
391 3bg3_A Pyruvate carboxylase, m 60.1 61 0.0021 35.8 12.1 92 211-314 238-335 (718)
392 1vcv_A Probable deoxyribose-ph 59.7 22 0.00077 33.5 7.5 96 211-320 51-152 (226)
393 3r0u_A Enzyme of enolase super 59.3 79 0.0027 31.8 12.1 95 231-338 141-244 (379)
394 2nq5_A 5-methyltetrahydroptero 59.3 42 0.0014 37.3 10.7 155 235-405 571-733 (755)
395 2p9b_A Possible prolidase; pro 59.2 68 0.0023 32.2 11.7 97 231-337 182-292 (458)
396 2nli_A Lactate oxidase; flavoe 59.1 16 0.00054 37.0 6.8 28 232-259 144-171 (368)
397 3eoo_A Methylisocitrate lyase; 58.5 10 0.00034 37.5 5.0 49 216-277 157-205 (298)
398 1vko_A Inositol-3-phosphate sy 58.3 22 0.00076 37.7 7.8 96 233-338 224-322 (537)
399 3o1n_A 3-dehydroquinate dehydr 58.3 54 0.0019 31.7 10.2 104 225-342 109-230 (276)
400 3qja_A IGPS, indole-3-glycerol 58.3 25 0.00086 34.0 7.8 60 240-314 128-187 (272)
401 2ocz_A 3-dehydroquinate dehydr 58.2 37 0.0013 31.9 8.8 155 208-415 1-178 (231)
402 3jva_A Dipeptide epimerase; en 58.1 10 0.00036 37.8 5.2 93 231-342 194-294 (354)
403 4a3u_A NCR, NADH\:flavin oxido 57.9 28 0.00096 34.9 8.4 105 217-331 223-330 (358)
404 2zbt_A Pyridoxal biosynthesis 57.8 8.3 0.00028 37.4 4.3 60 237-313 90-149 (297)
405 3qn3_A Enolase; structural gen 57.8 18 0.0006 37.4 6.9 118 210-345 236-368 (417)
406 2yw3_A 4-hydroxy-2-oxoglutarat 57.8 23 0.00078 32.7 7.1 57 238-315 74-130 (207)
407 1ep3_A Dihydroorotate dehydrog 57.8 20 0.00068 34.5 7.1 76 236-314 178-268 (311)
408 4dwd_A Mandelate racemase/muco 57.5 12 0.00041 38.1 5.6 90 230-338 201-297 (393)
409 3obe_A Sugar phosphate isomera 57.5 1.3E+02 0.0043 28.7 12.9 59 323-391 79-137 (305)
410 2yr1_A 3-dehydroquinate dehydr 57.3 56 0.0019 31.2 10.0 105 223-342 87-209 (257)
411 3r2g_A Inosine 5'-monophosphat 57.2 41 0.0014 34.0 9.4 69 239-316 154-228 (361)
412 3lye_A Oxaloacetate acetyl hyd 57.2 11 0.00036 37.5 4.9 48 216-276 164-211 (307)
413 3mqt_A Mandelate racemase/muco 56.9 1.2E+02 0.004 30.6 12.9 94 235-338 155-257 (394)
414 3i4k_A Muconate lactonizing en 56.8 44 0.0015 33.6 9.7 92 231-341 205-304 (383)
415 2hsa_B 12-oxophytodienoate red 56.7 28 0.00094 35.6 8.2 60 234-295 171-243 (402)
416 3elf_A Fructose-bisphosphate a 56.6 93 0.0032 31.3 11.8 125 273-413 8-158 (349)
417 3go2_A Putative L-alanine-DL-g 56.3 91 0.0031 31.6 12.1 105 230-338 141-267 (409)
418 3i6e_A Muconate cycloisomerase 56.2 51 0.0018 33.2 10.1 94 232-338 148-248 (385)
419 4af0_A Inosine-5'-monophosphat 56.2 31 0.0011 36.9 8.5 68 234-314 280-348 (556)
420 1tkk_A Similar to chloromucona 56.2 95 0.0032 30.7 12.0 95 232-338 140-243 (366)
421 3go2_A Putative L-alanine-DL-g 56.0 20 0.00067 36.6 6.9 92 230-342 223-320 (409)
422 1wbh_A KHG/KDPG aldolase; lyas 56.0 25 0.00087 32.6 7.2 84 238-344 79-165 (214)
423 3ddm_A Putative mandelate race 56.0 50 0.0017 33.4 9.9 94 233-339 156-257 (392)
424 3ppg_A 5-methyltetrahydroptero 55.8 65 0.0022 36.0 11.4 146 238-406 620-778 (789)
425 3cin_A MYO-inositol-1-phosphat 55.6 25 0.00085 36.1 7.5 96 232-338 119-218 (394)
426 1vcf_A Isopentenyl-diphosphate 55.4 30 0.001 34.1 8.0 26 289-314 256-283 (332)
427 2nli_A Lactate oxidase; flavoe 55.1 37 0.0013 34.2 8.7 69 238-314 241-311 (368)
428 3pao_A Adenosine deaminase; st 55.0 28 0.00097 34.5 7.7 92 235-341 150-246 (326)
429 3iv3_A Tagatose 1,6-diphosphat 54.9 59 0.002 32.4 10.0 116 240-379 116-272 (332)
430 3zwt_A Dihydroorotate dehydrog 54.9 16 0.00056 36.9 6.0 25 232-257 162-186 (367)
431 3mkc_A Racemase; metabolic pro 54.7 1.3E+02 0.0043 30.4 12.7 94 235-338 160-262 (394)
432 2qdd_A Mandelate racemase/muco 54.7 77 0.0026 31.6 11.1 93 231-338 144-242 (378)
433 3gd6_A Muconate cycloisomerase 54.3 88 0.003 31.4 11.5 93 231-336 141-243 (391)
434 2nzl_A Hydroxyacid oxidase 1; 54.1 13 0.00045 38.0 5.2 26 232-257 158-183 (392)
435 2gjl_A Hypothetical protein PA 54.0 1.6E+02 0.0055 28.5 14.4 99 289-416 71-178 (328)
436 1jub_A Dihydroorotate dehydrog 53.9 26 0.00089 34.0 7.2 82 232-314 170-269 (311)
437 3txv_A Probable tagatose 6-pho 53.8 1.5E+02 0.005 30.9 13.0 168 273-458 70-290 (450)
438 4e4u_A Mandalate racemase/muco 53.7 18 0.00062 37.0 6.2 90 230-338 211-308 (412)
439 3rcy_A Mandelate racemase/muco 53.7 15 0.00052 37.9 5.7 92 230-341 213-312 (433)
440 3eeg_A 2-isopropylmalate synth 53.6 47 0.0016 32.8 9.1 81 226-316 144-230 (325)
441 3dg3_A Muconate cycloisomerase 53.4 87 0.003 31.1 11.2 96 231-338 138-241 (367)
442 1sjd_A N-acylamino acid racema 53.4 16 0.00056 36.4 5.7 93 231-342 194-293 (368)
443 2hzg_A Mandelate racemase/muco 53.3 23 0.0008 35.8 7.0 92 232-342 207-306 (401)
444 3dg3_A Muconate cycloisomerase 53.0 15 0.00051 36.9 5.4 94 230-341 195-294 (367)
445 1vc4_A Indole-3-glycerol phosp 52.9 39 0.0013 32.2 8.1 99 223-338 56-159 (254)
446 3otr_A Enolase; structural gen 52.9 20 0.00068 37.5 6.3 105 226-345 276-388 (452)
447 2pgw_A Muconate cycloisomerase 52.8 24 0.00083 35.4 6.9 91 231-339 201-298 (384)
448 3ozy_A Putative mandelate race 52.7 30 0.001 35.0 7.6 90 230-338 205-303 (389)
449 2o7s_A DHQ-SDH PR, bifunctiona 52.7 51 0.0018 34.6 9.7 145 231-413 14-177 (523)
450 1thf_D HISF protein; thermophI 52.5 29 0.001 32.2 7.1 88 238-339 87-201 (253)
451 3epo_A Thiamine biosynthesis p 52.3 1.1E+02 0.0037 32.7 11.7 194 230-455 226-474 (612)
452 2qde_A Mandelate racemase/muco 52.2 23 0.00077 35.9 6.6 90 231-338 200-296 (397)
453 3tqk_A Phospho-2-dehydro-3-deo 52.2 1.5E+02 0.005 29.8 12.2 177 231-425 61-304 (346)
454 3rmj_A 2-isopropylmalate synth 52.2 52 0.0018 33.2 9.2 81 226-316 150-236 (370)
455 3dip_A Enolase; structural gen 52.0 47 0.0016 33.8 9.0 91 230-338 223-321 (410)
456 3f4w_A Putative hexulose 6 pho 52.0 23 0.00079 32.0 6.1 58 240-313 70-131 (211)
457 2gdq_A YITF; mandelate racemas 52.0 76 0.0026 31.7 10.5 93 234-338 141-241 (382)
458 1me8_A Inosine-5'-monophosphat 51.9 44 0.0015 35.0 9.0 72 239-314 297-379 (503)
459 1pii_A N-(5'phosphoribosyl)ant 51.6 44 0.0015 34.8 8.8 60 240-314 123-182 (452)
460 1m5w_A Pyridoxal phosphate bio 51.5 22 0.00074 34.1 5.8 42 268-314 110-153 (243)
461 3mkc_A Racemase; metabolic pro 51.5 30 0.001 35.1 7.4 90 232-341 218-315 (394)
462 4dxk_A Mandelate racemase / mu 51.4 29 0.001 35.2 7.3 92 230-341 220-319 (400)
463 2qgy_A Enolase from the enviro 51.4 19 0.00066 36.3 5.9 93 231-341 205-304 (391)
464 1nu5_A Chloromuconate cycloiso 51.3 26 0.00088 34.9 6.8 93 231-341 199-298 (370)
465 2cc0_A Acetyl-xylan esterase; 51.3 1.2E+02 0.0041 26.9 10.9 129 238-391 47-187 (195)
466 2pcq_A Putative dihydrodipicol 51.2 52 0.0018 31.7 8.8 109 219-341 7-126 (283)
467 1vjp_A MYO-inositol-1-phosphat 51.1 48 0.0017 33.8 8.6 92 233-338 120-218 (394)
468 3i65_A Dihydroorotate dehydrog 51.0 13 0.00045 38.4 4.6 24 233-257 198-221 (415)
469 3paj_A Nicotinate-nucleotide p 51.0 30 0.001 34.5 7.0 65 275-344 219-284 (320)
470 4hnl_A Mandelate racemase/muco 50.8 52 0.0018 33.4 9.2 107 231-338 152-277 (421)
471 4a35_A Mitochondrial enolase s 50.7 90 0.0031 32.1 11.0 94 231-338 200-304 (441)
472 1xm3_A Thiazole biosynthesis p 50.7 84 0.0029 29.9 10.1 101 230-339 75-184 (264)
473 3l23_A Sugar phosphate isomera 50.5 1.5E+02 0.0052 28.1 12.1 89 299-390 32-130 (303)
474 2a4a_A Deoxyribose-phosphate a 50.2 47 0.0016 32.4 8.2 119 211-344 90-234 (281)
475 1mdl_A Mandelate racemase; iso 50.0 54 0.0019 32.4 9.0 89 231-338 200-296 (359)
476 1w5q_A Delta-aminolevulinic ac 50.0 9.4 0.00032 38.1 3.1 99 217-340 218-324 (337)
477 3iwp_A Copper homeostasis prot 50.0 1.5E+02 0.0052 28.9 11.8 105 227-345 101-219 (287)
478 3l9c_A 3-dehydroquinate dehydr 50.0 32 0.0011 33.1 7.0 101 223-342 97-213 (259)
479 3zwt_A Dihydroorotate dehydrog 49.6 38 0.0013 34.2 7.8 83 231-314 231-325 (367)
480 2zc8_A N-acylamino acid racema 49.5 15 0.0005 36.8 4.6 93 231-342 193-292 (369)
481 2og9_A Mandelate racemase/muco 49.5 17 0.00057 36.9 5.1 90 231-338 218-314 (393)
482 3fcp_A L-Ala-D/L-Glu epimerase 49.2 47 0.0016 33.4 8.4 94 230-341 203-303 (381)
483 3l5a_A NADH/flavin oxidoreduct 49.1 15 0.00051 37.9 4.7 110 213-332 244-362 (419)
484 3qtp_A Enolase 1; glycolysis, 48.9 30 0.001 36.0 6.9 103 226-345 274-385 (441)
485 2ovl_A Putative racemase; stru 48.8 1.4E+02 0.0046 29.6 11.7 90 231-338 202-298 (371)
486 1mxs_A KDPG aldolase; 2-keto-3 48.4 29 0.00098 32.6 6.2 57 238-315 89-145 (225)
487 2rdx_A Mandelate racemase/muco 48.2 40 0.0014 33.7 7.7 90 231-341 200-296 (379)
488 2o7s_A DHQ-SDH PR, bifunctiona 48.1 71 0.0024 33.5 9.9 102 224-341 68-182 (523)
489 3sbf_A Mandelate racemase / mu 48.1 17 0.00059 36.9 5.0 90 230-338 211-308 (401)
490 2ps2_A Putative mandelate race 48.1 1.2E+02 0.0043 29.9 11.3 91 232-338 146-244 (371)
491 4af0_A Inosine-5'-monophosphat 48.0 30 0.001 37.0 6.8 68 367-456 282-349 (556)
492 1rvk_A Isomerase/lactonizing e 48.0 36 0.0012 34.0 7.3 90 231-338 211-308 (382)
493 3kws_A Putative sugar isomeras 47.9 1.7E+02 0.0059 27.1 11.8 96 289-392 25-129 (287)
494 2zds_A Putative DNA-binding pr 47.7 73 0.0025 30.4 9.3 81 323-406 114-199 (340)
495 4e5t_A Mandelate racemase / mu 47.6 47 0.0016 33.7 8.2 90 230-338 218-315 (404)
496 1tzz_A Hypothetical protein L1 47.3 24 0.00082 35.6 5.9 90 231-338 221-324 (392)
497 1chr_A Chloromuconate cycloiso 47.0 20 0.0007 35.9 5.2 93 231-341 199-298 (370)
498 3hpd_A Hydroxyethylthiazole ki 46.9 43 0.0015 32.3 7.3 92 272-392 2-98 (265)
499 1q7z_A 5-methyltetrahydrofolat 46.9 2.9E+02 0.0099 29.3 21.1 165 212-405 101-285 (566)
500 3i6e_A Muconate cycloisomerase 46.8 22 0.00076 35.9 5.5 93 231-341 203-302 (385)
No 1
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-116 Score=936.64 Aligned_cols=433 Identities=34% Similarity=0.574 Sum_probs=382.2
Q ss_pred ceeEEEEeCCCcccHHHHHHHHHHHHHhc-CCcEEEeeCcEEeCCCCCCCCccceeeeeeeccCCCHHHHHHHHHHHHH-
Q 038230 43 EQEVVIAMGSNVGDRLCNFNEALQLMKKL-GVNITRHGCLYETEPAYVTDQPRFLNSAVRGVTKLGPHELLGVLKKIEK- 120 (480)
Q Consensus 43 ~~~~~l~LGSN~gd~~~~i~~A~~~L~~~-~~~i~~~S~~y~T~P~g~~~q~~F~N~v~~~~T~l~p~~Ll~~lk~IE~- 120 (480)
++++|||||||+||+.+|+++|++.|++. +..++.+|++|+|+|||+.+||+|+|+|+.++|+|+|.+|++.||+||+
T Consensus 18 ~~~~~iaLGSNlGd~~~~l~~A~~~L~~~~~~~~~~~S~~yeT~P~g~~~q~~FlN~v~~~~T~l~p~~LL~~l~~IE~~ 97 (545)
T 2bmb_A 18 WKRAFLAFGSNIGDRFKHIQMALQLLSREKTVKLRNISSIFESEPMYFKDQTPFMNGCVEVETLLTPSELLKLCKKIEYE 97 (545)
T ss_dssp CEEEEEEEEECSSSHHHHHHHHHHHHHHSTTEEEEEECCEEEECCSSCTTSCCEEEEEEEEEESSCHHHHHHHHHHHHHH
T ss_pred cceEEEEEcCCcccHHHHHHHHHHHHHhCCCCceeEecCcEEeCCCCCCCCCCceeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999998 6788999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCCCccchhhccc-----CCeeeeCCCccccccccccchhhhhhhhhhhC-CCcccccc------ccCCcc
Q 038230 121 DMGRTNGIRHGPRPIDLDILFY-----GRFSIHSDTLTVPHERIWERPFVVAPLLDLLG-SSVESDTK------LGGESL 188 (480)
Q Consensus 121 ~~GR~r~~~~~~r~iDiDIl~~-----~~~~~~~~~l~iPHp~~~~R~fVl~pl~el~~-~~~~p~~~------~~~~~~ 188 (480)
++||+|..||||||||||||+| ++.++++++|+||||++++|+|||.||+||+| +++||... +..+..
T Consensus 98 ~~GR~R~~rwgpRtlDLDIL~y~~~~~~~~~~~~~~L~lPHP~~~eR~FVL~PL~ei~p~~~~~P~~~~~i~~ll~~l~~ 177 (545)
T 2bmb_A 98 ELQRVKHFDNGPRTIDLDIVMFLNSAGEDIIVNEPDLNIPHPRMLERTFVLEPLCELISPVHLHPVTAEPIVDHLKQLYD 177 (545)
T ss_dssp HTTC---------CCEEEEEEEECTTSCBCCEECSSCEESCTTGGGCHHHHHHHTTTSCTTCBCTTTCSBHHHHHHHHHH
T ss_pred HcCCccccCCCCceeeeeeecccccCCCCeEecCCCCCCCChhhhhCcHHHHHHHHhCcccccCCCCCccHHHHHHhCcc
Confidence 9999999999999999999999 99999999999999999999999999999999 99999511 111111
Q ss_pred ccc--cCcccccccccc-----------------------ccCCCCCcEEEEEEecCCCCCCCCCccC-CHHHHHHHHHH
Q 038230 189 IGK--EGMKRVLPIGNL-----------------------LWDWSLKTSVMGILNLTPDSFSDGGKFQ-SVEAAVSQVRL 242 (480)
Q Consensus 189 ~q~--~~i~r~~~~~~~-----------------------~~~~~~~~~imGIlN~tpDSFsdgg~~~-~~e~a~~~A~~ 242 (480)
.+. +.+++++++++. .+.++.+|+||||||+|||||||||+|. +.+.|+++|++
T Consensus 178 ~~~~~~~l~~~~pl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~iMGIlNvTPDSFsDGG~~~~~~~~al~~a~~ 257 (545)
T 2bmb_A 178 KQHDEDTLWKLVPLPYRSGVEPRFLKFKTATKLDEFTGETNRITVSPTYIMAIFNATPDSFSDGGEHFADIESQLNDIIK 257 (545)
T ss_dssp TCCGGGCEEEEEEECCCTTSCCEEEEEEEEEC-------CCEEECSCCEEEEEEECSCSSTTTTTTTTTCHHHHHHHHHH
T ss_pred cccccccceeeccccccccccccchhccccccccccccccccccCCCCeEEEEEeCCCCCCcCCCcCcCCHHHHHHHHHH
Confidence 000 234444544311 1124578999999999999999999998 99999999999
Q ss_pred HHHcC-----CCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC--CcCCCCeEEEeCCCHHHHHHHHHcCCCEEec
Q 038230 243 MISEG-----ADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTM--PEMEGKLVSVDTFYSKVASEAVGKGAHIVND 315 (480)
Q Consensus 243 ~v~~G-----AdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~--~~~~~~pISIDT~~~~v~~aaL~~G~~iINd 315 (480)
|+++| ||||||||+|||||+++||++||++|++|+|+++++. ....++|||||||+++|+++||++|++||||
T Consensus 258 mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT~~a~VaeaAl~aGadIIND 337 (545)
T 2bmb_A 258 LCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVDIIND 337 (545)
T ss_dssp HHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEECCCHHHHHHHHHTTCCEEEE
T ss_pred HHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCcHHHHHHHHHcCCCEEEe
Confidence 99999 9999999999999999999999999999999999861 1113799999999999999999999999999
Q ss_pred CCCCCCCchHHHHHHhc-CCCEEEEcCCCCCCccccccccchh--------------------------hHHHHHHHHHH
Q 038230 316 VSAGQLDPDMYKVVAGL-KVPYVAMHMRGDPSTMQNEENLQYD--------------------------DVCKQVASELY 368 (480)
Q Consensus 316 Vsg~~~d~~m~~l~~~~-~~~vVlmh~~g~p~~~~~~~~~~~~--------------------------~v~~ev~~~l~ 368 (480)
|||+..|++|++++++| +|+||+||++|+|+||++++.|..+ +++.++..+|.
T Consensus 338 Vsg~~~d~~m~~vva~~~~~~vVlmH~rG~p~tm~~~~~y~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vv~~v~~~l~ 417 (545)
T 2bmb_A 338 ISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIG 417 (545)
T ss_dssp TTTTSSCTTHHHHHHTCTTSEEEEECCCSCTTTGGGCCCCSSCTTTTTEEEEEETTEEGGGSTTHHHHCHHHHHHHHHHH
T ss_pred CCCCcCChHHHHHHHHhCCCeEEEECCCCCCCCccccccccccccccccchhccccccccccccccccchHHHHHHHHHH
Confidence 99998789999999999 9999999999999999987654311 29999999999
Q ss_pred HHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc---cc----------------CCCcEEEeeccccccccccCC
Q 038230 369 SKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL---AA----------------SHAPILIGPSRKRFLGEICNR 429 (480)
Q Consensus 369 ~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l---~~----------------~g~Pil~G~SrKsfi~~v~g~ 429 (480)
+++++|.++||++|+||+|||+||+|+.+||+++|+++ +. +|+|+|+|+|||||||.++|.
T Consensus 418 ~~i~~a~~~GI~~~~IilDPGiGF~Kt~~~nl~lL~~l~~l~~~~~~~~~~~~~~~~~~~g~PvLvG~SRKsFig~l~g~ 497 (545)
T 2bmb_A 418 ERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQVYVNLRNMPVLLGPSRKKFIGHITKD 497 (545)
T ss_dssp HHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHTTEEEEEEETTEEEEEECTTCCBEECCTTCHHHHHHHTC
T ss_pred HHHHHHHHcCCCHHHEEEeCCCCcccChHHHHHHHHHHHHHHhhhccccccccccccccCCCCEEEEeccHHHHHHhcCC
Confidence 99999999999999999999999999999999999998 33 389999999999999999998
Q ss_pred CCcCcccHHHHHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHHhh
Q 038230 430 PSADERDPATIASITAGVLGGANIVRVHNIRDNLDAVKLCDSMLTR 475 (480)
Q Consensus 430 ~~~~~r~~~t~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~~~ 475 (480)
+++.+|+++|++++++|+.+||+|+|||||+|+++|++|++++++.
T Consensus 498 ~~~~~R~~~T~a~~~~a~~~Ga~IvRVHDV~e~~~a~~~~~ai~~~ 543 (545)
T 2bmb_A 498 VDAKQRDFATGAVVASCIGFGSDMVRVHDVKNCSKSIKLADAIYKG 543 (545)
T ss_dssp CSGGGGHHHHHHHHHHHHHTTCSEEEESCHHHHHHHHHHHHHHHHC
T ss_pred CChHHhhHHHHHHHHHHHHCCCcEEEcCCHHHHHHHHHHHHHHHhh
Confidence 6678999999999999999999999999999999999999999753
No 2
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=100.00 E-value=6.4e-116 Score=916.87 Aligned_cols=413 Identities=30% Similarity=0.371 Sum_probs=327.8
Q ss_pred eEEecccceeEEEEeCCCcccHHHHHHHHHHHHHhc-CCcEEEeeCcEEeCCCCCCCCc-----cceeeeeeeccCCCHH
Q 038230 36 TVEVQSQEQEVVIAMGSNVGDRLCNFNEALQLMKKL-GVNITRHGCLYETEPAYVTDQP-----RFLNSAVRGVTKLGPH 109 (480)
Q Consensus 36 ~~~~~~~~~~~~l~LGSN~gd~~~~i~~A~~~L~~~-~~~i~~~S~~y~T~P~g~~~q~-----~F~N~v~~~~T~l~p~ 109 (480)
.+.....++++|||||||+||+.+|+++|++.|++. +..++.+|++|+|+|||+.+|| +|+|+|+.++|+|+|.
T Consensus 14 ~~~~~~~m~~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~~~S~~y~T~p~g~~~qp~~w~~~FlN~v~~~~T~l~p~ 93 (442)
T 3mcm_A 14 LVPRGSHMVQYIIGIGTNSGFTIENIHLAITALESQQNIRIIRKASLYSSKAVLKEDAPKEWDIRFLNTAVKISSSLKPD 93 (442)
T ss_dssp ------CCEEEEEEEEECSSSHHHHHHHHHHHHHHSTTEEEEEECCCEEECCC----------CCEEEEEEEEEECCCHH
T ss_pred CCCCCCCccEEEEEEeCCccCHHHHHHHHHHHHhcCCCCceEEeCceEEecCCCCCCCCccCCCCeEEEEEEEEeCCCHH
Confidence 334456789999999999999999999999999988 6788999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHHHcCCCC-CCCCCCCccchhhcccCCeeeeCCCccccccccccchhhhhhhhhhhCCCccccccccCCcc
Q 038230 110 ELLGVLKKIEKDMGRTN-GIRHGPRPIDLDILFYGRFSIHSDTLTVPHERIWERPFVVAPLLDLLGSSVESDTKLGGESL 188 (480)
Q Consensus 110 ~Ll~~lk~IE~~~GR~r-~~~~~~r~iDiDIl~~~~~~~~~~~l~iPHp~~~~R~fVl~pl~el~~~~~~p~~~~~~~~~ 188 (480)
+|++.||+||+++||+| ..||||||||||||+|++.++++++|+||||++++|+|||.||+||+|+++||.....-...
T Consensus 94 ~LL~~l~~IE~~~GR~r~~~~~gpRtiDlDIL~y~~~~~~~~~L~iPHp~~~~R~FVL~PL~ei~p~~~hP~~~~~~~~~ 173 (442)
T 3mcm_A 94 ELLVLLKDIELKIGRDLNAPAWSPRVIDLDILAAEDLILETDKLTIPHKELINRSFALAPLLELSKGWHHPKYVEWDLNI 173 (442)
T ss_dssp HHHHHHHHHHHHC-----------CCCEEEEEECTTCCEECSSCEESCTTGGGCHHHHHHHHHHCTTCCCTTCTTCCHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCCcceeeeEEeeCCEEecCCccccCCcchhhChHHHHHHHHhCccCcCCCchhhHHHH
Confidence 99999999999999999 69999999999999999999999999999999999999999999999999999732111110
Q ss_pred ccccCccccccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHH
Q 038230 189 IGKEGMKRVLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAE 268 (480)
Q Consensus 189 ~q~~~i~r~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~ 268 (480)
+ ++.... + ++.++++.+|+||||||+||||||||| .+.++|+++|++|+++|||||||||+|||||+++|+++
T Consensus 174 ~-~~~~~~---~-~~~~~~~~~~~vMGIlNvTPDSFsDgg--~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~ 246 (442)
T 3mcm_A 174 R-LKELGE---I-VKLKQTLANTIRMGIVNLSNQSFSDGN--FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIE 246 (442)
T ss_dssp H-HHHCC----C-EECSCCCCSSEEEEEEECSSCC-CCCS--SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHH
T ss_pred h-hcchhh---h-ccccCCCCCceEEEEEeCCCCCCCCCC--CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHH
Confidence 0 111111 2 566778789999999999999999999 78899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcC-CcC-CCCeEEEeCCCHHHHHHHHH--cCCCE-EecCCCCCCCchHHHHHHhcCCCEEEEcCCC
Q 038230 269 KELERLIPVLEAVLTM-PEM-EGKLVSVDTFYSKVASEAVG--KGAHI-VNDVSAGQLDPDMYKVVAGLKVPYVAMHMRG 343 (480)
Q Consensus 269 eE~~rl~~vi~~l~~~-~~~-~~~pISIDT~~~~v~~aaL~--~G~~i-INdVsg~~~d~~m~~l~~~~~~~vVlmh~~g 343 (480)
||++|++|+|++|++. ... .++||||||++|+|+++||+ +|++| ||||+|. .+++|++++++|+|+||+||++|
T Consensus 247 EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~~~aGa~i~INDVsg~-~d~~m~~v~a~~g~~vVlMh~~G 325 (442)
T 3mcm_A 247 EEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILAKHHDIIWMINDVECN-NIEQKAQLIAKYNKKYVIIHNLG 325 (442)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHHHHGGGCCEEEECCCT-THHHHHHHHHHHTCEEEEECC--
T ss_pred HHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHhhCCCCCEEEEcCCCC-CChHHHHHHHHhCCeEEEECCCC
Confidence 9999999999999861 000 28999999999999999999 99999 9999994 58999999999999999999999
Q ss_pred CCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc---cc-CCCcEEEeecc
Q 038230 344 DPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL---AA-SHAPILIGPSR 419 (480)
Q Consensus 344 ~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l---~~-~g~Pil~G~Sr 419 (480)
.|+|||.. .|+|++.++..+|++++++|.++||++++||+|||+||+|+.+||+++|+++ +. +|+|+|+|+||
T Consensus 326 ~P~tmq~~---~y~dvv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGF~Kt~~~nl~lL~~l~~l~~~lg~PvLvG~SR 402 (442)
T 3mcm_A 326 ITDRNQYL---DKENAIDNVCDYIEQKKQILLKHGIAQQNIYFDIGFGFGKKSDTARYLLENIIEIKRRLELKALVGHSR 402 (442)
T ss_dssp -----------------CTHHHHHHHHHHHHHHHTCCGGGEEEECCCC------------CCHHHHHHHHTSEEEECCTT
T ss_pred CCcccccc---CcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCCCCCHHHHHHHHHHHHHHHhhCCCcEEEEech
Confidence 99999943 2899999999999999999999999999999999999999999999999998 34 79999999999
Q ss_pred ccccccccCCCCcCcccHHHHHHHHHHHHcCCcEEEcCCh
Q 038230 420 KRFLGEICNRPSADERDPATIASITAGVLGGANIVRVHNI 459 (480)
Q Consensus 420 Ksfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~IlRvHdV 459 (480)
|||||.++|..++++|+++|+|++++|+.+||+|+|||||
T Consensus 403 Ksfig~~~~~~~~~~R~~gt~a~~~~a~~~Ga~ivRvHDV 442 (442)
T 3mcm_A 403 KPSVLGLTKDSNLATLDRATRELSRKLEKLDIDIIRVHKI 442 (442)
T ss_dssp CTTTTTCCTTCCHHHHHHHHHHHHHHHTTTTCSEEEESCC
T ss_pred HHHHHHHcCCCChHHhhHHHHHHHHHHHHCCCCEEecCCC
Confidence 9999999986557899999999999999999999999997
No 3
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=100.00 E-value=7.5e-82 Score=620.40 Aligned_cols=255 Identities=39% Similarity=0.644 Sum_probs=233.7
Q ss_pred CCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCC
Q 038230 209 LKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEME 288 (480)
Q Consensus 209 ~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~ 288 (480)
++|+||||||+|||||||||+|.+.+.|+++|++|+++|||||||||||||||+++|+++||++|+.|+|+.|++.
T Consensus 5 ~r~~iMGIlNvTPDSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~---- 80 (270)
T 4hb7_A 5 TKTKIMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGF---- 80 (270)
T ss_dssp CCCEEEEEEECC----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTS----
T ss_pred CCCeEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcC----
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHH
Q 038230 289 GKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELY 368 (480)
Q Consensus 289 ~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~ 368 (480)
++|||||||+|+|+++||++|++|||||+|+..|++|++++++|+++||+||++|.|+ |++++.++..||.
T Consensus 81 ~v~iSIDT~~~~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p~---------~~~vv~ev~~~l~ 151 (270)
T 4hb7_A 81 DVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNR---------DEPVVEEMLTSLL 151 (270)
T ss_dssp SSEEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSCC---------SSCHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHhccceeccccccccchhHHHHHHHcCCCeEEeccccCCc---------cccchhHHHHHHH
Confidence 8999999999999999999999999999998889999999999999999999998774 5789999999999
Q ss_pred HHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc---ccCCCcEEEeeccccccccccCC-CCcCcccHHHHHHHH
Q 038230 369 SKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL---AASHAPILIGPSRKRFLGEICNR-PSADERDPATIASIT 444 (480)
Q Consensus 369 ~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l---~~~g~Pil~G~SrKsfi~~v~g~-~~~~~r~~~t~a~~~ 444 (480)
++++.|.++||++++||+|||+||+|+.+||+++|+++ +.+|+|+|+|+|||||||.++|. .+|++|+++|+++++
T Consensus 152 ~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~~~~~lg~PvLvG~SRKsfig~~lg~~~~~~~R~~gt~a~~~ 231 (270)
T 4hb7_A 152 AQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTA 231 (270)
T ss_dssp HHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHTCHHHHHTTCSCBEECCTTSHHHHHHHCSCCCSGGGHHHHHHHHH
T ss_pred HHHHHHHHcCCCCceEEEeCCCCcccccccHHHHHhhHHHHhcCCCCEEEEecHHHHHHHHhCCCCChHHhhHHHHHHHH
Confidence 99999999999999999999999999999999999998 56899999999999999999985 246899999999999
Q ss_pred HHHHcCCcEEEcCChHHHHHHHHHHHHHHhhh
Q 038230 445 AGVLGGANIVRVHNIRDNLDAVKLCDSMLTRR 476 (480)
Q Consensus 445 ~a~~~Ga~IlRvHdV~e~~~al~~~~ai~~~~ 476 (480)
+|+.+||+|+|||||+|+++++++++++++.+
T Consensus 232 ~a~~~Ga~ivRVHDV~e~~~a~~~~~ai~~~~ 263 (270)
T 4hb7_A 232 YGIMKGVRAVRVHNVELNAKLAKGIDFLKENE 263 (270)
T ss_dssp HHHHHTCCEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEeCCHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999998644
No 4
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=100.00 E-value=1.8e-77 Score=600.20 Aligned_cols=270 Identities=38% Similarity=0.603 Sum_probs=245.9
Q ss_pred ccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHH
Q 038230 198 LPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPV 277 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~v 277 (480)
|.++++.+++ .+|+||||||+|||||||||+|.+.+.|+++|++|+++||||||||++|||||+++|+++||++|++|+
T Consensus 11 ~~~~~~~~~~-~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pv 89 (294)
T 2y5s_A 11 LQCGRFELTF-ERPLVMGILNATPDSFSDGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPL 89 (294)
T ss_dssp EEETTEEECC-SSCEEEEEEECCC----------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHH
T ss_pred hccCCcccCC-CCceEEEEEeCCCCCCCCCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHH
Confidence 6666777777 469999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccc-cccccch
Q 038230 278 LEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQ-NEENLQY 356 (480)
Q Consensus 278 i~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~-~~~~~~~ 356 (480)
|+.+++. ++||||||++|+|+++||++|++||||||+++ +++|++++++|+++||+||++|.|+||+ .. +.|
T Consensus 90 i~~l~~~----~vpiSIDT~~~~Va~aAl~aGa~iINdVsg~~-d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~--~~y 162 (294)
T 2y5s_A 90 VEALRPL----NVPLSIDTYKPAVMRAALAAGADLINDIWGFR-QPGAIDAVRDGNSGLCAMHMLGEPQTMQVGE--PDY 162 (294)
T ss_dssp HHHHGGG----CSCEEEECCCHHHHHHHHHHTCSEEEETTTTC-STTHHHHHSSSSCEEEEECCCEETTTTEECC--CCC
T ss_pred HHHHhhC----CCeEEEECCCHHHHHHHHHcCCCEEEECCCCC-chHHHHHHHHhCCCEEEECCCCCCccccccC--Ccc
Confidence 9999975 89999999999999999999999999999998 8999999999999999999999999997 54 457
Q ss_pred hhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccCh-hHHHHHHHhc---c-----cCCCcEEEeecccccccccc
Q 038230 357 DDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKA-EHNLDILLGL---A-----ASHAPILIGPSRKRFLGEIC 427 (480)
Q Consensus 357 ~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~-~~~~~~lr~l---~-----~~g~Pil~G~SrKsfi~~v~ 427 (480)
+|+++++.++|.+++++|.++||++++||+|||+||+|+. +||+++|+++ + .+|+|+|+|+|||||||.++
T Consensus 163 ~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~~~n~~ll~~l~~l~~~~~~~~g~Pvl~G~Srksfig~l~ 242 (294)
T 2y5s_A 163 GDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVI 242 (294)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSSCTTHHHHHHHHTGGGGSCBCTTSSBCCBEEECTTCHHHHTTT
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCcccccchHHHHHHHHHHHHHHhccccCCCCCEEEEecccHHhhhhc
Confidence 8999999999999999999999999999999999999999 9999999998 5 67999999999999999999
Q ss_pred CCCCcC-cccHHHHHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHHhhh
Q 038230 428 NRPSAD-ERDPATIASITAGVLGGANIVRVHNIRDNLDAVKLCDSMLTRR 476 (480)
Q Consensus 428 g~~~~~-~r~~~t~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~~~~ 476 (480)
|.+ +. +|.++|++++++|+.+|++|+|||||+++++|+++++++++.+
T Consensus 243 g~~-~~~~R~~~t~a~~~~a~~~Ga~IvrvHDV~e~~~a~~~~~al~~~~ 291 (294)
T 2y5s_A 243 GGK-PPLERVAASVAAALCAVERGAAIVRVHDVAATVDALSVWNAVRAAA 291 (294)
T ss_dssp TSC-CGGGCHHHHHHHHHHHHHTTCSEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred CCC-chhhhhHHHHHHHHHHHHcCCcEEEcCCHHHHHHHHHHHHHHHhhh
Confidence 976 57 9999999999999999999999999999999999999997543
No 5
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-77 Score=604.47 Aligned_cols=276 Identities=29% Similarity=0.404 Sum_probs=209.5
Q ss_pred cccccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHH
Q 038230 195 KRVLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERL 274 (480)
Q Consensus 195 ~r~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl 274 (480)
..++.++++.++++ +|+||||||+|||||||||+|.+.+.|+++|++|+++||||||||++||||| ++|+++||++|+
T Consensus 27 ~~~~~~~~~~~~~~-~~~vMGIlNvTPDSFsdgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG-~~v~~~eEl~Rv 104 (318)
T 2vp8_A 27 AGHSTLCGRPVAGD-RALIMAIVNRTPDSFYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPG-ERVDVDTEITRL 104 (318)
T ss_dssp CCCEEETTEEECSS-SCEEEEEEC--------------CHHHHHHHHHHHHTTCSEEEEC-----------CHHHHHHHH
T ss_pred ccceeeCCEEcCCC-CcEEEEEEeCCCCcccCCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCC-CCCCHHHHHHHH
Confidence 34456677777774 7999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCC-CCccccccc
Q 038230 275 IPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGD-PSTMQNEEN 353 (480)
Q Consensus 275 ~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~-p~~~~~~~~ 353 (480)
+|+|+.|++.. .++||||||++++|+++||++|++|||||+|++ +++|++++++|+++||+||++|. |+|||+++.
T Consensus 105 ~pvI~~l~~~~--~~vpISIDT~~~~VaeaAl~aGa~iINDVsg~~-d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~ 181 (318)
T 2vp8_A 105 VPFIEWLRGAY--PDQLISVDTWRAQVAKAACAAGADLINDTWGGV-DPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVS 181 (318)
T ss_dssp HHHHHHHHHHS--TTCEEEEECSCHHHHHHHHHHTCCEEEETTSSS-STTHHHHHHHHTCEEEEECC-------------
T ss_pred HHHHHHHHhhC--CCCeEEEeCCCHHHHHHHHHhCCCEEEECCCCC-chHHHHHHHHhCCCEEEECCCCCCccccccccc
Confidence 99999999752 289999999999999999999999999999997 89999999999999999999999 999998654
Q ss_pred cch--hhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc---ccCCCcEEEeeccccccccccC
Q 038230 354 LQY--DDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL---AASHAPILIGPSRKRFLGEICN 428 (480)
Q Consensus 354 ~~~--~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l---~~~g~Pil~G~SrKsfi~~v~g 428 (480)
|.+ +|++.++.++|.+++++|.++||++++||+|||+||+|+.+||+++|+++ +.+|+|+|+|+|||||||+++|
T Consensus 182 y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt~~~nl~ll~~l~~l~~lg~PvL~G~SrKsfig~~~g 261 (318)
T 2vp8_A 182 YGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLG 261 (318)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHHHHHTTSSCBEECCC----------
T ss_pred cccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccCHHHHHHHHHHHHHHHhCCCCEEEEeCcchhhhhhcC
Confidence 311 89999999999999999999999999999999999999999999999998 5689999999999999999999
Q ss_pred CCCcCcccHHHHHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHHhhh
Q 038230 429 RPSADERDPATIASITAGVLGGANIVRVHNIRDNLDAVKLCDSMLTRR 476 (480)
Q Consensus 429 ~~~~~~r~~~t~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~~~~ 476 (480)
++ +++|+++|++++++|+.+|++|+|||||+++++++++++++++..
T Consensus 262 ~~-~~~r~~~t~a~~~~a~~~Ga~IvRvHDV~e~~~a~~~~~al~~~~ 308 (318)
T 2vp8_A 262 VD-LTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVR 308 (318)
T ss_dssp ------CHHHHHHHHHHHHHTTCCEEEESCHHHHHHHHHHHHHHTTSS
T ss_pred CC-hHHhHHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHHHHhccC
Confidence 86 689999999999999999999999999999999999999996543
No 6
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=100.00 E-value=2.6e-77 Score=598.21 Aligned_cols=269 Identities=41% Similarity=0.644 Sum_probs=230.4
Q ss_pred cccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHH
Q 038230 197 VLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIP 276 (480)
Q Consensus 197 ~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~ 276 (480)
.+.++++.+++ .+|+||||||+|||||||||+|.+.+.|+++|++|+++||||||||++|||||+++|+++||++|++|
T Consensus 16 ~~~~~~~~~~~-~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~p 94 (294)
T 2dqw_A 16 TLWLRDRALDL-DRVRLLGVLNLTPDSFSDGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLP 94 (294)
T ss_dssp EEECSSSEEEC-SSCEEEEEEECCC-------------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHH
T ss_pred EEeeCCeecCC-CCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHH
Confidence 35666677777 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCC-CCCCccccccccc
Q 038230 277 VLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMR-GDPSTMQNEENLQ 355 (480)
Q Consensus 277 vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~-g~p~~~~~~~~~~ 355 (480)
+|+.+++. ++||||||++++|+++||++|++|||||||+ .+++|++++++|+++||+||++ |.|+|||..+ .
T Consensus 95 vI~~l~~~----~vpiSIDT~~~~Va~aAl~aGa~iINdVsg~-~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~--~ 167 (294)
T 2dqw_A 95 VLEAVLSL----GVPVSVDTRKPEVAEEALKLGAHLLNDVTGL-RDERMVALAARHGVAAVVMHMPVPDPATMMAHA--R 167 (294)
T ss_dssp HHHHHHTT----CSCEEEECSCHHHHHHHHHHTCSEEECSSCS-CCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGC--C
T ss_pred HHHHHHhC----CCeEEEECCCHHHHHHHHHhCCCEEEECCCC-CChHHHHHHHHhCCCEEEEcCCCCCCccccccC--c
Confidence 99999975 8999999999999999999999999999999 6899999999999999999999 9999999864 5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc---ccCCCcEEEeeccccccccccCCCCc
Q 038230 356 YDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL---AASHAPILIGPSRKRFLGEICNRPSA 432 (480)
Q Consensus 356 ~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l---~~~g~Pil~G~SrKsfi~~v~g~~~~ 432 (480)
|+|+++++.++|.+++++|.++||+ +||||||+||+|+.+||+++|+++ +.+|+|+|+|+|||||||.++|.+++
T Consensus 168 y~dv~~ev~~~l~~~i~~a~~~Gi~--~IilDPG~Gf~kt~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfig~l~g~p~~ 245 (294)
T 2dqw_A 168 YRDVVAEVKAFLEAQARRALSAGVP--QVVLDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVEDP 245 (294)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTCS--CEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHHTCCSG
T ss_pred cccHHHHHHHHHHHHHHHHHHCCCC--cEEEcCCCCcccCHHHHHHHHHHHHHHhcCCCCEEEEeccchhhhhhcCCCch
Confidence 7899999999999999999999999 999999999999999999999998 45899999999999999999998656
Q ss_pred CcccHHHHHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHHhh
Q 038230 433 DERDPATIASITAGVLGGANIVRVHNIRDNLDAVKLCDSMLTR 475 (480)
Q Consensus 433 ~~r~~~t~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~~~ 475 (480)
++|.++|++++++|+.+|++|+|||||+++++|+++++++++.
T Consensus 246 ~~R~~~t~a~~~~a~~~Ga~IvRvHDV~~~~~a~~~~~al~~~ 288 (294)
T 2dqw_A 246 AQRVHGSVAAHLFAVMKGVRLLRVHDVRAHREALGVWEALYGG 288 (294)
T ss_dssp GGCHHHHHHHHHHHHHTTCCEEEESCHHHHHHHHHHHHHHCC-
T ss_pred hhhHHHHHHHHHHHHHcCCcEEEcCCHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999999999999998643
No 7
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=100.00 E-value=2.7e-76 Score=593.73 Aligned_cols=270 Identities=33% Similarity=0.523 Sum_probs=254.1
Q ss_pred cccccc-cccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCC----CCCHHHHH
Q 038230 197 VLPIGN-LLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMAT----KISAEKEL 271 (480)
Q Consensus 197 ~~~~~~-~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~----~v~~~eE~ 271 (480)
.+.+++ +.++++ +|+||||||+||||||| +|.+.+.|+++|++|+++||||||||++|||||++ +||++||+
T Consensus 14 ~~~~~~~~~~~~~-~~~vMGIlNvTpDSFsd--~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~ 90 (314)
T 3tr9_A 14 HLRLRDDKRIVFS-EPAVMGIINVSPNSFYH--PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIEL 90 (314)
T ss_dssp EEECTTSCEEEES-SCEEEEEEECSTTCSBC--BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHH
T ss_pred EEecCCceEecCC-CcEEEEEEeCCCCchhh--ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHH
Confidence 356666 677774 79999999999999999 99999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccc
Q 038230 272 ERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNE 351 (480)
Q Consensus 272 ~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~ 351 (480)
+|+.|+|+.|++. .++||||||++|+|+++||++|++|||||||++ +++|++++++|+++||+||++|.|+|||..
T Consensus 91 ~Rv~pvI~~l~~~---~~vpISIDT~~~~Va~aAl~aGa~iINDVsg~~-~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~ 166 (314)
T 3tr9_A 91 DRLLPVIDAIKKR---FPQLISVDTSRPRVMREAVNTGADMINDQRALQ-LDDALTTVSALKTPVCLMHFPSETRKPGST 166 (314)
T ss_dssp HHHHHHHHHHHHH---CCSEEEEECSCHHHHHHHHHHTCCEEEETTTTC-STTHHHHHHHHTCCEEEECCCCTTCCTTSS
T ss_pred HHHHHHHHHHHhh---CCCeEEEeCCCHHHHHHHHHcCCCEEEECCCCC-chHHHHHHHHhCCeEEEECCCCCCcccccc
Confidence 9999999999986 489999999999999999999999999999988 789999999999999999999999999975
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC---CccChhHHHHHHHhc---ccCCCcEEEeecccccccc
Q 038230 352 ENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG---FSKKAEHNLDILLGL---AASHAPILIGPSRKRFLGE 425 (480)
Q Consensus 352 ~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG---f~k~~~~~~~~lr~l---~~~g~Pil~G~SrKsfi~~ 425 (480)
+ .| |+++++.++|++++++|.++||++++||||||+| |+|+.+||+++|+++ +.+|+|+|+|+|||||||+
T Consensus 167 ~--~y-dvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~PvL~G~SRKsfig~ 243 (314)
T 3tr9_A 167 T--HF-YFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGD 243 (314)
T ss_dssp C--HH-HHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSCBEECCTTCHHHHH
T ss_pred c--cc-chHHHHHHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCHHHHHHHHHHHHHHhcCCCCEEEEechhhhhhh
Confidence 4 57 9999999999999999999999999999999999 999999999999998 5689999999999999999
Q ss_pred ccCCCCcCcccHHHHHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHHhhhh
Q 038230 426 ICNRPSADERDPATIASITAGVLGGANIVRVHNIRDNLDAVKLCDSMLTRRK 477 (480)
Q Consensus 426 v~g~~~~~~r~~~t~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~~~~~ 477 (480)
++|.+ +++|+++|++++++|+++||+|+|||||+|+++|+++++++++..+
T Consensus 244 ~~~~~-~~~R~~~t~a~~~~a~~~Ga~IvRvHDV~e~~~a~~~~~a~~~~~~ 294 (314)
T 3tr9_A 244 VLNQP-PENRLFGSIAADVLAVYHGASIIRTHDVKATREAIKIATYTRSVDT 294 (314)
T ss_dssp HHTCC-GGGCHHHHHHHHHHHHHTTCSEEEESCHHHHHHHHHHHHHHHHTC-
T ss_pred hcCCC-hHHhHHHHHHHHHHHHHcCCcEEEeCChHHHHHHHHHHHHHHhhcc
Confidence 99986 6899999999999999999999999999999999999999987554
No 8
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=100.00 E-value=8.6e-76 Score=585.52 Aligned_cols=270 Identities=38% Similarity=0.633 Sum_probs=256.3
Q ss_pred ccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHH
Q 038230 198 LPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPV 277 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~v 277 (480)
|.++++.+++ .+|+||||||+|||||||||++.+.++|+++|++|+++||||||||++|||||+++|+++||++|+.|+
T Consensus 3 ~~~~~~~~~~-~~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pv 81 (282)
T 1aj0_A 3 LFAQGTSLDL-SHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPV 81 (282)
T ss_dssp EEETTEEEET-TSCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHH
T ss_pred eccCCcccCC-CCCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHH
Confidence 4455666777 489999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchh
Q 038230 278 LEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYD 357 (480)
Q Consensus 278 i~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~ 357 (480)
|+.|++. .++||||||++|+|+++||++|++||||||++ .+++|++++++|+++||+||++|.|+|||+++ .|+
T Consensus 82 i~~l~~~---~~~piSIDT~~~~va~aAl~aGa~iINdvsg~-~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~--~y~ 155 (282)
T 1aj0_A 82 VEAIAQR---FEVWISVDTSKPEVIRESAKVGAHIINDIRSL-SEPGALEAAAETGLPVCLMHMQGNPKTMQEAP--KYD 155 (282)
T ss_dssp HHHHHHH---CCCEEEEECCCHHHHHHHHHTTCCEEEETTTT-CSTTHHHHHHHHTCCEEEECCSSCTTCCSCCC--CCS
T ss_pred HHHHHhh---cCCeEEEeCCCHHHHHHHHHcCCCEEEECCCC-CCHHHHHHHHHhCCeEEEEccCCCCccccccC--ccc
Confidence 9999976 48999999999999999999999999999998 58999999999999999999999999999865 478
Q ss_pred hHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc---ccCCCcEEEeeccccccccccCCCCcCc
Q 038230 358 DVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL---AASHAPILIGPSRKRFLGEICNRPSADE 434 (480)
Q Consensus 358 ~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l---~~~g~Pil~G~SrKsfi~~v~g~~~~~~ 434 (480)
|++.++.++|.+++++|.++||++++||+|||+||+|+.+||+++|+++ +.+|+|+|+|+|||||||+++|++ +++
T Consensus 156 d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf~k~~~~n~~ll~~l~~~~~~g~P~l~G~Srksfig~~~g~~-~~~ 234 (282)
T 1aj0_A 156 DVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVG-PSE 234 (282)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEECCTTCHHHHHHHTCC-GGG
T ss_pred hHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCcccCHHHHHHHHHHHHHHhcCCCCEEEEECccHhHHhhcCCC-HHH
Confidence 9999999999999999999999999999999999999999999999998 458999999999999999999986 689
Q ss_pred ccHHHHHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHHhh
Q 038230 435 RDPATIASITAGVLGGANIVRVHNIRDNLDAVKLCDSMLTR 475 (480)
Q Consensus 435 r~~~t~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~~~ 475 (480)
|+++|++++++++.+|++|+|||||+++++|+++++++++.
T Consensus 235 rl~~t~a~~~~a~~~ga~IvrvhdV~~~~~a~~~~~a~~~~ 275 (282)
T 1aj0_A 235 RLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSA 275 (282)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999765
No 9
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=100.00 E-value=1.3e-75 Score=583.64 Aligned_cols=261 Identities=41% Similarity=0.672 Sum_probs=234.4
Q ss_pred CCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCC
Q 038230 209 LKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEME 288 (480)
Q Consensus 209 ~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~ 288 (480)
.+|+||||||+|||||||||+|.+.+.|+++|++|+++||||||||++|||||+++|+++||++|++|+|+.+++.
T Consensus 4 ~~~~imgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~---- 79 (280)
T 1eye_A 4 APVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ---- 79 (280)
T ss_dssp -CCEEEEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT----
T ss_pred CCcEEEEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC----
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred CCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHH
Q 038230 289 GKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELY 368 (480)
Q Consensus 289 ~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~ 368 (480)
++||||||++|+|+++||++|++|||||||++.+++|++++++|+++||+||++|.|+||++++ ..|.+++.++.++|.
T Consensus 80 ~~piSIDT~~~~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~-~~y~dv~~~v~~~l~ 158 (280)
T 1eye_A 80 GITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVP-VRYGNVVAEVRADLL 158 (280)
T ss_dssp TCCEEEECSCHHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSC-CCCSSHHHHHHHHHH
T ss_pred CCEEEEeCCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcC-cchhHHHHHHHHHHH
Confidence 8999999999999999999999999999998778999999999999999999999999999861 247899999999999
Q ss_pred HHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc---ccCCCcEEEeecccccccccc----C--CCCcCcccHHH
Q 038230 369 SKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL---AASHAPILIGPSRKRFLGEIC----N--RPSADERDPAT 439 (480)
Q Consensus 369 ~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l---~~~g~Pil~G~SrKsfi~~v~----g--~~~~~~r~~~t 439 (480)
+++++|.++||++++||||||+||+|+.+||+++|+++ +.+|+|+|+|+||||||+.++ | .+ +++|.++|
T Consensus 159 ~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfi~~~~~~~~g~~~~-~~~R~~~t 237 (280)
T 1eye_A 159 ASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLAGPDGVMRP-TDGRDTAT 237 (280)
T ss_dssp HHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHTCCSSSCCCC-GGGGHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHHHHhhcCCCCEEEEecchHHHHhhhccccCCCCC-cccchHHH
Confidence 99999999999999999999999999999999999998 468999999999999999999 5 54 67899999
Q ss_pred HHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHHhh
Q 038230 440 IASITAGVLGGANIVRVHNIRDNLDAVKLCDSMLTR 475 (480)
Q Consensus 440 ~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~~~ 475 (480)
++++++|+.+|++|+|||||+++++++++++++++.
T Consensus 238 ~a~~~~a~~~Ga~IvrvhdV~~~~~a~~~~~al~~~ 273 (280)
T 1eye_A 238 AVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGA 273 (280)
T ss_dssp HHHHHHHHHTTCSEEEESCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEeCCHHHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999753
No 10
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=100.00 E-value=9.2e-75 Score=586.08 Aligned_cols=263 Identities=34% Similarity=0.540 Sum_probs=228.2
Q ss_pred CCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCC
Q 038230 209 LKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEME 288 (480)
Q Consensus 209 ~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~ 288 (480)
.+|+||||||+|||||||||+|.+.+.|+++|++|+++||||||||++|||||+++|+++||++|++|+|++|++. .
T Consensus 8 ~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~---~ 84 (314)
T 2vef_A 8 AKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKE---S 84 (314)
T ss_dssp CCCEEEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHH---C
T ss_pred CCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhh---C
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999976 4
Q ss_pred CCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCC--CCCc----------------ccc
Q 038230 289 GKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRG--DPST----------------MQN 350 (480)
Q Consensus 289 ~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g--~p~~----------------~~~ 350 (480)
++||||||++|+|+++||++|++|||||||++.|++|++++++|+|+||+||++| .|.+ ||+
T Consensus 85 ~vpiSIDT~~~~Va~aAl~aGa~iINDVsg~~~d~~m~~v~a~~~~~vvlmh~~~~g~p~~~~~~~~~~~~~g~~~~~~~ 164 (314)
T 2vef_A 85 DVLISIDTWKSQVAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFGQAFTEEE 164 (314)
T ss_dssp CCEEEEECSCHHHHHHHHHTTCCEEEETTTTCSCTTHHHHHHHHTCEEEEECCHHHHCTTSTTTTTSCCCCC--CCCC--
T ss_pred CceEEEeCCCHHHHHHHHHcCCCEEEECCCCCCChHHHHHHHHcCCCEEEEecCCCCCCCCccccccccccccccccccc
Confidence 8999999999999999999999999999999878999999999999999999964 6766 343
Q ss_pred ccccchhhH-HHH-HHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc---ccCCCcEEEeecccccccc
Q 038230 351 EENLQYDDV-CKQ-VASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL---AASHAPILIGPSRKRFLGE 425 (480)
Q Consensus 351 ~~~~~~~~v-~~e-v~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l---~~~g~Pil~G~SrKsfi~~ 425 (480)
. ..|+++ +++ +.++|++++++|.++||++++||||||+||+|+.+||+++|+++ +.+|+|+|+|+|||||||.
T Consensus 165 ~--~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~IilDPGiGF~kt~~~nl~ll~~l~~l~~~g~PvL~G~SrKsfig~ 242 (314)
T 2vef_A 165 L--ADFETLPIEELMEAFFERALARAAEAGIAPENILLDPGIGFGLTKKENLLLLRDLDKLHQKGYPIFLGVSRKRFVIN 242 (314)
T ss_dssp C--HHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEEECSSCHHHHH
T ss_pred c--cccccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCcccchHHHHHHHHHHHHhhcCCCCEEEEeCccHHHhh
Confidence 3 347787 888 58999999999999999999999999999999999999999998 4589999999999999999
Q ss_pred cc---CCC-Cc------CcccHHHHHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHHhhh
Q 038230 426 IC---NRP-SA------DERDPATIASITAGVLGGANIVRVHNIRDNLDAVKLCDSMLTRR 476 (480)
Q Consensus 426 v~---g~~-~~------~~r~~~t~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~~~~ 476 (480)
++ |++ +| .+|..+|++++++|+.+|++|+|||||+++++++++++++++..
T Consensus 243 ~~~~~g~~~~p~tel~~~~R~~~t~a~~~~a~~~Ga~IvRvHDV~~~~~a~~~~~al~~~d 303 (314)
T 2vef_A 243 ILEENGFEVNPETELGFRNRDTASAHVTSIAARQGVEVVRVHDVASHRMAVEIASAIRLAD 303 (314)
T ss_dssp HHHHTTCCCCTTSHHHHHHHHHHHHHHHHHHHHTTCSEEEESCHHHHHHHHHHHHHHHTCC
T ss_pred hhccccccCCcccccchhhhhHHHHHHHHHHHHcCCcEEEeCCHHHHHHHHHHHHHHhccc
Confidence 98 441 23 48999999999999999999999999999999999999997644
No 11
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=100.00 E-value=1.4e-73 Score=572.73 Aligned_cols=265 Identities=38% Similarity=0.666 Sum_probs=248.4
Q ss_pred ccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHH
Q 038230 198 LPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPV 277 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~v 277 (480)
|.++++.++++.+|+||||||+|||||||||+|.+.++|+++|++|+++||||||||++|||||+++++++||++|++|+
T Consensus 27 ~~~~~~~~~~~~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~Rvvpv 106 (297)
T 1tx2_A 27 LRCGEYTLNLNEKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPM 106 (297)
T ss_dssp EEETTEEECSSSSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHH
T ss_pred eccCCeecCCCCCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHH
Confidence 55677788887789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchh
Q 038230 278 LEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYD 357 (480)
Q Consensus 278 i~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~ 357 (480)
|+.+++. .++||||||++|+|+++||++|++|||||++++.+++|++++++|+++||+||++|.|+ |+
T Consensus 107 I~~l~~~---~~vpiSIDT~~~~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~---------y~ 174 (297)
T 1tx2_A 107 IQAVSKE---VKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMN---------YR 174 (297)
T ss_dssp HHHHHHH---SCSCEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCC---------CS
T ss_pred HHHHHhc---CCceEEEeCCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCC---------cc
Confidence 9999975 38999999999999999999999999999998778999999999999999999999885 57
Q ss_pred hHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc---ccCCCcEEEeeccccccccccCCCCcCc
Q 038230 358 DVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL---AASHAPILIGPSRKRFLGEICNRPSADE 434 (480)
Q Consensus 358 ~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l---~~~g~Pil~G~SrKsfi~~v~g~~~~~~ 434 (480)
++++++.++|.+++++|.++||++++||+|||+||+|+.+||+++|+++ +.+|+|+|+|+|||||||+++|++ +++
T Consensus 175 d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~~ll~~l~~l~~lg~Pvl~G~Srksfig~~~g~~-~~~ 253 (297)
T 1tx2_A 175 NLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLP-VEE 253 (297)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEEECTTCHHHHHHHTCC-GGG
T ss_pred hHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCcCCCHHHHHHHHHHHHHHHhCCCCEEEEeccchhhhhhcCCC-HHH
Confidence 8999999999999999999999999999999999999999999999998 457999999999999999999986 689
Q ss_pred ccHHHHHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHHhh
Q 038230 435 RDPATIASITAGVLGGANIVRVHNIRDNLDAVKLCDSMLTR 475 (480)
Q Consensus 435 r~~~t~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~~~ 475 (480)
|+++|++++++|+.+|++|+|||||+|+++|++|++++++.
T Consensus 254 r~~~t~a~~~~a~~~ga~IvrvhdV~e~~~a~~~~~a~~~~ 294 (297)
T 1tx2_A 254 RLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIGK 294 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESCHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999998753
No 12
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=100.00 E-value=1.6e-56 Score=444.88 Aligned_cols=238 Identities=16% Similarity=0.175 Sum_probs=212.1
Q ss_pred CCCCcEEEE-EEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCC
Q 038230 207 WSLKTSVMG-ILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMP 285 (480)
Q Consensus 207 ~~~~~~imG-IlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~ 285 (480)
++.++.|+| |+|+|||||||||++.+.+.++++|++|+++||||||||++|+ .+||++|+.|+|+.|++.
T Consensus 6 ~~~~~~iigEilN~Tpdsf~dg~~~~~~~~a~~~a~~~v~~GAdiIDIg~~s~--------~~eE~~rv~~vi~~l~~~- 76 (271)
T 2yci_X 6 GSHMFIMIGERINGMFKDIREAILNKDPRPIQEWARRQAEKGAHYLDVNTGPT--------ADDPVRVMEWLVKTIQEV- 76 (271)
T ss_dssp CCCCCEEEEEEEETTSHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECCSC--------SSCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEEecCCChhhHHHhhhhCCHHHHHHHHHHHHHCCCCEEEEcCCcC--------chhHHHHHHHHHHHHHHh-
Confidence 456788999 9999999999999999999999999999999999999999983 357999999999999986
Q ss_pred cCCCCeEEEeCCCHHHHHHHHHc--CCCEEecCCCCCCC--chHHHHHHhcCCCEEEEcC--CCCCCccccccccchhhH
Q 038230 286 EMEGKLVSVDTFYSKVASEAVGK--GAHIVNDVSAGQLD--PDMYKVVAGLKVPYVAMHM--RGDPSTMQNEENLQYDDV 359 (480)
Q Consensus 286 ~~~~~pISIDT~~~~v~~aaL~~--G~~iINdVsg~~~d--~~m~~l~~~~~~~vVlmh~--~g~p~~~~~~~~~~~~~v 359 (480)
.++||||||++|+|+++||++ |++||||||+++ + ++|++++++||+++|+||+ +|+|.|+
T Consensus 77 --~~~pisIDT~~~~v~~aal~a~~Ga~iINdvs~~~-d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~----------- 142 (271)
T 2yci_X 77 --VDLPCCLDSTNPDAIEAGLKVHRGHAMINSTSADQ-WKMDIFFPMAKKYEAAIIGLTMNEKGVPKDA----------- 142 (271)
T ss_dssp --CCCCEEEECSCHHHHHHHHHHCCSCCEEEEECSCH-HHHHHHHHHHHHHTCEEEEESCBTTBCCCSH-----------
T ss_pred --CCCeEEEeCCCHHHHHHHHHhCCCCCEEEECCCCc-cccHHHHHHHHHcCCCEEEEecCCCCCCCCH-----------
Confidence 489999999999999999999 999999999986 6 8999999999999999999 8888763
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCC-ccChhHHHHHHHhc---ccC---CCcEEEeeccccccccccCCCCc
Q 038230 360 CKQVASELYSKVRDAELSGIPAWRIIIDPGLGF-SKKAEHNLDILLGL---AAS---HAPILIGPSRKRFLGEICNRPSA 432 (480)
Q Consensus 360 ~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf-~k~~~~~~~~lr~l---~~~---g~Pil~G~SrKsfi~~v~g~~~~ 432 (480)
+++.++|+++++.|.++||++++||+|||+|| +|+.++|+++|+++ +.. ++|+++|+||||| |.+ +
T Consensus 143 -~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l~~~~~~~~p~~p~l~G~Snksf-----g~~-~ 215 (271)
T 2yci_X 143 -NDRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPAPRTVLGLSNVSQ-----KCP-D 215 (271)
T ss_dssp -HHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHHHHHHHHHHHTTSSSSCCEEEEEGGGGGT-----TCS-S
T ss_pred -HHHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCHHHHHHHHHHHHHHHHhCCCCCCEEEeeCcccc-----CCc-h
Confidence 45678999999999999999999999999999 99999999999987 333 5999999999999 554 4
Q ss_pred CcccHHHHHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHHhh
Q 038230 433 DERDPATIASITAGVLGGANIVRVHNIRDNLDAVKLCDSMLTR 475 (480)
Q Consensus 433 ~~r~~~t~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~~~ 475 (480)
.+|..+|+++++++...|+.|+|+||+ ++++++++++++++.
T Consensus 216 r~~l~~t~~~~a~~~g~~~~iv~~~d~-~~~~~~~~~~al~~~ 257 (271)
T 2yci_X 216 RPLINRTYLVMAMTAGLDAAIMDVDDD-ALVDAAATAHILLNK 257 (271)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECTTCH-HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhCCcEEECCCcH-HHHHHHHHHHHHhCC
Confidence 556666665555555566789999999 899999999999653
No 13
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=100.00 E-value=6.7e-55 Score=439.71 Aligned_cols=239 Identities=13% Similarity=0.095 Sum_probs=213.5
Q ss_pred CCCCcE-EEEEEecCCCCCCCC--CccCCH-HHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038230 207 WSLKTS-VMGILNLTPDSFSDG--GKFQSV-EAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVL 282 (480)
Q Consensus 207 ~~~~~~-imGIlN~tpDSFsdg--g~~~~~-e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~ 282 (480)
+..+|+ +|||+|+|||||||| |++.+. +.++++|++|+++||||||||++||||++.+++++||++ +|+.++
T Consensus 43 ~~~~p~i~m~I~n~tpdsf~d~i~~~~~~~~~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~----vV~~v~ 118 (310)
T 2h9a_B 43 MPNPPRFALEVFDTPPTDWPDILVEPFKDVINDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAE----VCKAVA 118 (310)
T ss_dssp CCSCCEEEEEEESSCCSSCCHHHHGGGTTTTTCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHH----HHHHHH
T ss_pred CCCCCeEEEEEeeCCCcccchhhhhhhccHHHHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHH----HHHHHH
Confidence 456788 999999999999999 999987 899999999999999999999999999999999999998 455566
Q ss_pred cCCcCCCCeEEE-eC----CCHHHHHHHHHcCCC---EEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCcccccccc
Q 038230 283 TMPEMEGKLVSV-DT----FYSKVASEAVGKGAH---IVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENL 354 (480)
Q Consensus 283 ~~~~~~~~pISI-DT----~~~~v~~aaL~~G~~---iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~ 354 (480)
+. .++|||| || ++|+|+++||++|++ |||||++++ +++|++++++||++||+||++
T Consensus 119 ~~---~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~~-~~~~~~~aa~~g~~vv~m~~~------------ 182 (310)
T 2h9a_B 119 DA---IDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKDN-YKPIVATCMVHGHSVVASAPL------------ 182 (310)
T ss_dssp HH---CSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTTT-HHHHHHHHHHHTCEEEEECSS------------
T ss_pred Hh---CCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCCc-cHHHHHHHHHhCCCEEEEChh------------
Confidence 54 3899999 99 999999999999997 999999985 799999999999999999974
Q ss_pred chhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC-CccChh---HHHHHHHh--c---ccCCCcEEEeeccc-----
Q 038230 355 QYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG-FSKKAE---HNLDILLG--L---AASHAPILIGPSRK----- 420 (480)
Q Consensus 355 ~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG-f~k~~~---~~~~~lr~--l---~~~g~Pil~G~SrK----- 420 (480)
| .+++.+++++|.++||++++||+|||+| |+++.+ +|++++|+ + +.+|+|+|+|+|||
T Consensus 183 ---d-----v~~l~~~~~~a~~~Gi~~e~IilDPg~g~~g~~~e~~~~~l~~ir~~al~~~~~lg~P~l~g~SrK~~~~~ 254 (310)
T 2h9a_B 183 ---D-----INLSKQLNIMIMEMNLAPNRIIMDPLIGALGYGIEYSYSIIERMRLGALTGDKILAMPVVCFIGQEAWKAK 254 (310)
T ss_dssp ---C-----HHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHHHHHTTCGGGCSCBEECHHHHHTTSH
T ss_pred ---H-----HHHHHHHHHHHHHCCCChhhEEEeCCCccccCchHhHHHHHHHHHHhhhhhhhcCCCCEEEEccCcccccc
Confidence 1 1678999999999999999999999999 585544 56999999 4 46799999999999
Q ss_pred -cccccccCCCCcCcccHH-HHHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHH
Q 038230 421 -RFLGEICNRPSADERDPA-TIASITAGVLGGANIVRVHNIRDNLDAVKLCDSML 473 (480)
Q Consensus 421 -sfi~~v~g~~~~~~r~~~-t~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~ 473 (480)
||++.+++..++++|..+ +++++++++.+||+|+|||||+++++++++++++.
T Consensus 255 es~i~~~~~~g~~~~R~~~~~~a~a~~~~~~Ga~ivrvHdv~~~~~~~~~~~al~ 309 (310)
T 2h9a_B 255 EAKDPEVAEWGDYALRAIHWETVTTVALIQAGGHLFVMRHPKSLAEVKEHLKRIL 309 (310)
T ss_dssp HHHCSCCGGGCCHHHHHHHHHHHHHHHHHHHTCCEEEECCHHHHHHHHHHHHHHC
T ss_pred cchhhhcccCCChHHcchhHHHHHHHHHHHcCCCEEEECCHHHHHHHHHHHHHHh
Confidence 999987422136889988 89899999999999999999999999999999985
No 14
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=100.00 E-value=3.5e-55 Score=433.51 Aligned_cols=232 Identities=14% Similarity=0.164 Sum_probs=197.9
Q ss_pred EEEE-EEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCC
Q 038230 212 SVMG-ILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGK 290 (480)
Q Consensus 212 ~imG-IlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~ 290 (480)
.|.| -||+|||||||||++.+.+.++++|++|+++||||||||+ ++.+++++||++|++|+|+. . .++
T Consensus 2 ~~iGErlNvTpdsFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIg~-----g~~~v~~~ee~~rvv~~i~~---~---~~~ 70 (262)
T 1f6y_A 2 LIIGERINGMFGDIKRAIQERDPAPVQEWARRQEEGGARALDLNV-----GPAVQDKVSAMEWLVEVTQE---V---SNL 70 (262)
T ss_dssp EEEECCSBTTSHHHHHHHHHTCHHHHHHHHHHHHHHTCSEEEEBC-----C----CHHHHHHHHHHHHHT---T---CCS
T ss_pred cEEeecccCCchhHHHhhhcCCHHHHHHHHHHHHHCCCcEEEECC-----CCCCCChHHHHHHHHHHHHH---h---CCC
Confidence 5677 7999999999999999999999999999999999999998 44678899999999998865 3 389
Q ss_pred eEEEeCCCHHHHHHHHHc--CCCEEecCCCCCCCc--hHHHHHHhcCCCEEEEcC--CCCCCccccccccchhhHHHHHH
Q 038230 291 LVSVDTFYSKVASEAVGK--GAHIVNDVSAGQLDP--DMYKVVAGLKVPYVAMHM--RGDPSTMQNEENLQYDDVCKQVA 364 (480)
Q Consensus 291 pISIDT~~~~v~~aaL~~--G~~iINdVsg~~~d~--~m~~l~~~~~~~vVlmh~--~g~p~~~~~~~~~~~~~v~~ev~ 364 (480)
||||||++|+|+++||++ |++|||||||+. ++ +|++++++|++++|+||+ +|.|+|+++ +.
T Consensus 71 pisIDT~~~~v~~aAl~a~~Ga~iINdvs~~~-d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~------------~~ 137 (262)
T 1f6y_A 71 TLCLDSTNIKAIEAGLKKCKNRAMINSTNAER-EKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDT------------RL 137 (262)
T ss_dssp EEEEECSCHHHHHHHHHHCSSCEEEEEECSCH-HHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHH------------HH
T ss_pred eEEEeCCCHHHHHHHHhhCCCCCEEEECCCCc-ccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHH------------HH
Confidence 999999999999999999 999999999974 55 899999999999999999 789988754 34
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEecCCC-CccChhHHHHHHHhc---cc-C--CCcEEEeeccccccccccCCCCcCcccH
Q 038230 365 SELYSKVRDAELSGIPAWRIIIDPGLG-FSKKAEHNLDILLGL---AA-S--HAPILIGPSRKRFLGEICNRPSADERDP 437 (480)
Q Consensus 365 ~~l~~~i~~a~~~Gi~~~~IilDPgiG-f~k~~~~~~~~lr~l---~~-~--g~Pil~G~SrKsfi~~v~g~~~~~~r~~ 437 (480)
+++++++++|.++||++++||+|||+| |+++.++|+++|+++ +. + |+|+|+|+||||| |.+ +.+|+.
T Consensus 138 ~~~~~~~~~a~~~Gi~~~~IilDPg~g~~g~~~~~~~~~l~~l~~l~~~~~pg~pvl~G~Srksf-----g~~-~~~~l~ 211 (262)
T 1f6y_A 138 AFAMELVAAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQ-----NCQ-NRPLIN 211 (262)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEECCCCCTTTCTTHHHHHHHHHHHHHTCCSSCCEEEEEGGGGGT-----TCS-SHHHHH
T ss_pred HHHHHHHHHHHHCCCCcccEEEeCCCCcCCCChHHHHHHHHHHHHHHHHhCCCCCEEEeecCCcC-----CCC-HHHHHH
Confidence 788999999999999999999999999 899989999998887 33 4 9999999999999 554 456666
Q ss_pred HHHHHHHHHHHcCCcEEEcCCh-HHHHHHHHHHHHHHhh
Q 038230 438 ATIASITAGVLGGANIVRVHNI-RDNLDAVKLCDSMLTR 475 (480)
Q Consensus 438 ~t~a~~~~a~~~Ga~IlRvHdV-~e~~~al~~~~ai~~~ 475 (480)
+|++ ++|+..|+++.|+|++ .++++++++++++.+.
T Consensus 212 ~t~~--~~a~~~g~~~~iv~~~d~~~~~~~~~~~al~~~ 248 (262)
T 1f6y_A 212 RTFL--AMAMACGLMSAIADACDEALIETAATAEILLNQ 248 (262)
T ss_dssp HHHH--HHHHHTTCCEEEECTTCHHHHHHHHHHHHHTTS
T ss_pred HHHH--HHHHHHhCCeEEECcCcHHHHHHHHHHHHHhCC
Confidence 6654 6677777655555554 3599999999999643
No 15
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.1e-51 Score=408.69 Aligned_cols=229 Identities=17% Similarity=0.191 Sum_probs=200.4
Q ss_pred cCCCCCcEEEE-EEecC-CCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038230 205 WDWSLKTSVMG-ILNLT-PDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVL 282 (480)
Q Consensus 205 ~~~~~~~~imG-IlN~t-pDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~ 282 (480)
++.+.++.++| .+|+| |||||||+++.+++.++++|++|+++||||||||+ ++.+++++||++|++|+|+.++
T Consensus 6 ~~~~~~~~iIGEriNvTg~~sf~~~~~~~~~~~a~~~A~~~v~~GAdiIDIg~-----g~~~v~~~eem~rvv~~i~~~~ 80 (300)
T 3k13_A 6 VKPEINFVNIGERCNVAGSRKFLRLVNEKKYDEALSIARQQVEDGALVIDVNM-----DDGLLDARTEMTTFLNLIMSEP 80 (300)
T ss_dssp ---CTTCEEEEEEEETTTCHHHHHHHHTTCHHHHHHHHHHHHHTTCSEEEEEC-----CCTTSCHHHHHHHHHHHHHTCH
T ss_pred eCCCCCcEEEEEeccCCCCHHHHHHHhcCCHHHHHHHHHHHHHCCCCEEEECC-----CCCCCCHHHHHHHHHHHHHHhh
Confidence 34456799999 99999 99999999999999999999999999999999998 4667899999999999998876
Q ss_pred cCCcCCCCeEEEeCCCHHHHHHHHH--cCCCEEecCCCCCCCc---hHHHHHHhcCCCEEEEcC--CCCCCccccccccc
Q 038230 283 TMPEMEGKLVSVDTFYSKVASEAVG--KGAHIVNDVSAGQLDP---DMYKVVAGLKVPYVAMHM--RGDPSTMQNEENLQ 355 (480)
Q Consensus 283 ~~~~~~~~pISIDT~~~~v~~aaL~--~G~~iINdVsg~~~d~---~m~~l~~~~~~~vVlmh~--~g~p~~~~~~~~~~ 355 (480)
+. .++||||||++++|+++||+ +|++||||||++..++ +|++++++||++||+||+ +|+|+||+++
T Consensus 81 ~~---~~vpisIDT~~~~V~eaaL~~~~Ga~iINdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~---- 153 (300)
T 3k13_A 81 EI---ARVPVMIDSSKWEVIEAGLKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQADTAARK---- 153 (300)
T ss_dssp HH---HTSCEEEECSCHHHHHHHHHHCSSCCEEEEECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHH----
T ss_pred hc---CCCeEEEeCCCHHHHHHHHHhcCCCCEEEeCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHH----
Confidence 54 48999999999999999999 7999999999987666 899999999999999999 7899988653
Q ss_pred hhhHHHHHHHHHHHHHHHH-HHCCCCCCCEEEecCCC-CccChhH----HHHHHHhc---c-cC-CCcEEEeeccccccc
Q 038230 356 YDDVCKQVASELYSKVRDA-ELSGIPAWRIIIDPGLG-FSKKAEH----NLDILLGL---A-AS-HAPILIGPSRKRFLG 424 (480)
Q Consensus 356 ~~~v~~ev~~~l~~~i~~a-~~~Gi~~~~IilDPgiG-f~k~~~~----~~~~lr~l---~-~~-g~Pil~G~SrKsfi~ 424 (480)
.+++++.++.| .++||++++||+|||+| |+|+.++ |+++|+++ + .+ |+|+++|+|||||
T Consensus 154 --------~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg~pvl~G~SnkSf-- 223 (300)
T 3k13_A 154 --------IEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLSF-- 223 (300)
T ss_dssp --------HHHHHHHHHHHHHHTCCCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBGGGGGG--
T ss_pred --------HHHHHHHHHHHHHHcCCCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCCCCEEEEECcccc--
Confidence 24445555554 89999999999999997 9999888 99998887 4 44 9999999999999
Q ss_pred cccCCC-CcCcccHHHHHHHHHHHHcCCcEEEcCC
Q 038230 425 EICNRP-SADERDPATIASITAGVLGGANIVRVHN 458 (480)
Q Consensus 425 ~v~g~~-~~~~r~~~t~a~~~~a~~~Ga~IlRvHd 458 (480)
|+| ++.+|.+.|.++.++|++.|.++.++|=
T Consensus 224 ---glp~~~~~R~~~n~~fl~~ai~~Gld~~Ivn~ 255 (300)
T 3k13_A 224 ---SFRGNNYIREAMHAVFLYHAIQQGMDMGIVNP 255 (300)
T ss_dssp ---GGTTCHHHHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ---cCCCCcchhHHHHHHHHHHHHHcCCCEEecCc
Confidence 554 1246999999999999999999888875
No 16
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=3.2e-49 Score=428.18 Aligned_cols=237 Identities=14% Similarity=0.218 Sum_probs=212.3
Q ss_pred ccCCCCCcEEEEE-EecC-CCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 038230 204 LWDWSLKTSVMGI-LNLT-PDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAV 281 (480)
Q Consensus 204 ~~~~~~~~~imGI-lN~t-pDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l 281 (480)
.+.+ .++.|||+ +|+| ||||||||++.+.++++++|++|+++|||||||| ||+.+++++||++|++|+|+..
T Consensus 309 ~~~~-~~~~iiGer~N~Tg~dsf~~~~~~~~~~~a~~~A~~~v~~GAdiIDIg-----pg~~~v~~~ee~~rvv~~i~~~ 382 (566)
T 1q7z_A 309 LVTF-DHFVVIGERINPAGRKKLWAEMQKGNEEIVIKEAKTQVEKGAEVLDVN-----FGIESQIDVRYVEKIVQTLPYV 382 (566)
T ss_dssp EEES-SSCEEEEEEECCTTCHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEE-----CSSGGGSCHHHHHHHHHHHHHH
T ss_pred eecc-ccceEEEEEecCCCChhHHHHhhcCCHHHHHHHHHHHHHCCCCEEEEC-----CCCCCCCHHHHHHHHHHHHHhh
Confidence 3344 67999998 9999 9999999999999999999999999999999999 7888899999999999999443
Q ss_pred HcCCcCCCCeEEEeCCCHHHHHHHHHc--CCCEEecCCCCCCC--chHHHHHHhcCCCEEEEcCCC-CCCccccccccch
Q 038230 282 LTMPEMEGKLVSVDTFYSKVASEAVGK--GAHIVNDVSAGQLD--PDMYKVVAGLKVPYVAMHMRG-DPSTMQNEENLQY 356 (480)
Q Consensus 282 ~~~~~~~~~pISIDT~~~~v~~aaL~~--G~~iINdVsg~~~d--~~m~~l~~~~~~~vVlmh~~g-~p~~~~~~~~~~~ 356 (480)
.++||||||++++|+++||++ |++||||||+++ + ++|++++++||++||+||++| +|+| |
T Consensus 383 ------~~vpisIDT~~~~v~eaal~~~~G~~iINdis~~~-~~~~~~~~~~~~~g~~vV~m~~~~~~p~t--------~ 447 (566)
T 1q7z_A 383 ------SNVPLSLDIQNVDLTERALRAYPGRSLFNSAKVDE-EELEMKINLLKKYGGTLIVLLMGKDVPKS--------F 447 (566)
T ss_dssp ------TCSCEEEECCCHHHHHHHHHHCSSCCEEEEEESCH-HHHHHHHHHHHHHCCEEEEESCSSSCCCS--------H
T ss_pred ------CCceEEEeCCCHHHHHHHHHhcCCCCEEEECCcch-hhHHHHHHHHHHhCCeEEEEeCCCCCcCC--------H
Confidence 389999999999999999999 999999999987 7 899999999999999999998 7765 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCC---CCccChhHHHHHHHhc---ccCCCcEEEeeccccccccccCCC
Q 038230 357 DDVCKQVASELYSKVRDAELSGIPAWRIIIDPGL---GFSKKAEHNLDILLGL---AASHAPILIGPSRKRFLGEICNRP 430 (480)
Q Consensus 357 ~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgi---Gf~k~~~~~~~~lr~l---~~~g~Pil~G~SrKsfi~~v~g~~ 430 (480)
++ +.++++++++.|.++||+ ++||+|||+ ||+| +|+++|+++ +.+|+|+++|+|||||+ .+
T Consensus 448 ~~----~~~~l~~~~~~a~~~Gi~-~~IilDPg~~~igfgk---~~~~~l~~~~~~~~~g~p~l~G~Snksf~-----~~ 514 (566)
T 1q7z_A 448 EE----RKEYFEKALKILERHDFS-DRVIFDPGVLPLGAEG---KPVEVLKTIEFISSKGFNTTVGLSNLSFG-----LP 514 (566)
T ss_dssp HH----HHHHHHHHHHHHHHTTCG-GGEEEECCCCCTTTTC---CHHHHHHHHHHHHHTTCEECCBGGGGSTT-----ST
T ss_pred HH----HHHHHHHHHHHHHHCCCC-CcEEEeCCCCcccCcH---HHHHHHHHHHHHHhCCCCEEEEeCccccc-----CC
Confidence 33 678999999999999999 999999999 9999 888888887 45699999999999996 33
Q ss_pred CcCcccHHHHHHHHHHHHcCCcEEEcCChH-HHHHHHHHHHHHHhhhh
Q 038230 431 SADERDPATIASITAGVLGGANIVRVHNIR-DNLDAVKLCDSMLTRRK 477 (480)
Q Consensus 431 ~~~~r~~~t~a~~~~a~~~Ga~IlRvHdV~-e~~~al~~~~ai~~~~~ 477 (480)
+.+|+.+|++ ++|+.+|++|+||||++ ++++++++++++++..+
T Consensus 515 -~~~~l~~t~a--~~a~~~G~~i~rvh~~~~~~~~~i~~~~~l~~~~~ 559 (566)
T 1q7z_A 515 -DRSYYNTAFL--VLGISKGLSSAIMNPLDETLMKTLNATLVILEKKE 559 (566)
T ss_dssp -THHHHHHHHH--HHHHHTTCCEEEECTTCHHHHHHHHHHHHHTTSCC
T ss_pred -HHHHHHHHHH--HHHHHcCCCEEEECCCcHHHHHHHHHHHHHhCCCc
Confidence 4567766665 89999999999999999 79999999999976543
No 17
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=100.00 E-value=6e-46 Score=340.11 Aligned_cols=140 Identities=38% Similarity=0.607 Sum_probs=135.8
Q ss_pred ccceeEEEEeCCCcccHHHHHHHHHHHHHhc-CCcEEEeeCcEEeCCCCCCCCccceeeeeeeccCCCHHHHHHHHHHHH
Q 038230 41 SQEQEVVIAMGSNVGDRLCNFNEALQLMKKL-GVNITRHGCLYETEPAYVTDQPRFLNSAVRGVTKLGPHELLGVLKKIE 119 (480)
Q Consensus 41 ~~~~~~~l~LGSN~gd~~~~i~~A~~~L~~~-~~~i~~~S~~y~T~P~g~~~q~~F~N~v~~~~T~l~p~~Ll~~lk~IE 119 (480)
+.++++|||||||+||+.+|+++|++.|++. +..++.+|++|+|+|||+.+||+|+|+|+.++|+++|.+|++.|++||
T Consensus 2 ~~M~~v~i~LGSNlGd~~~~l~~A~~~L~~~~~~~v~~~S~~yeT~P~G~~~q~~FlN~v~~~~T~l~p~~LL~~l~~IE 81 (161)
T 3qbc_A 2 SHMIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTE 81 (161)
T ss_dssp CCCEEEEEEEEECSSSHHHHHHHHHHHHHHSTTEEEEEECCCEEECCSSSSSSCCEEEEEEEEEECSCHHHHHHHHHHHH
T ss_pred CcccEEEEEEecCccCHHHHHHHHHHHHhcCCCCceEEECCEEEECCCCCCCCCcceEEEEEEEeCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999986 668899999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCccchhhcccCCeeeeCCCccccccccccchhhhhhhhhhhCCCcccc
Q 038230 120 KDMGRTNGIRHGPRPIDLDILFYGRFSIHSDTLTVPHERIWERPFVVAPLLDLLGSSVESD 180 (480)
Q Consensus 120 ~~~GR~r~~~~~~r~iDiDIl~~~~~~~~~~~l~iPHp~~~~R~fVl~pl~el~~~~~~p~ 180 (480)
+++||+|..||||||||||||+||+.++++++|+||||++++|+|||.||+||+|+++||.
T Consensus 82 ~~~GR~R~~r~gpRtlDlDIL~y~~~~~~~~~L~lPHP~~~eR~FVL~PL~eiap~~~hP~ 142 (161)
T 3qbc_A 82 ECLHRIRKERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEPR 142 (161)
T ss_dssp HHHHSCSCGGGCCCCCEEEEEEETTCCEEETTEEESCTTGGGCHHHHHHHHHHHTTCEETT
T ss_pred HHhCCCCCCcCCCceEeEEEEeeCCEEecCCCcccCCcchhhChHHHHHHHHhCcCCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999996
No 18
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=100.00 E-value=2.8e-45 Score=335.89 Aligned_cols=138 Identities=33% Similarity=0.582 Sum_probs=134.0
Q ss_pred ceeEEEEeCCCcccHHHHHHHHHHHHHhc-CCcEEEeeCcEEeCCCCCCCCccceeeeeeeccCCCHHHHHHHHHHHHHH
Q 038230 43 EQEVVIAMGSNVGDRLCNFNEALQLMKKL-GVNITRHGCLYETEPAYVTDQPRFLNSAVRGVTKLGPHELLGVLKKIEKD 121 (480)
Q Consensus 43 ~~~~~l~LGSN~gd~~~~i~~A~~~L~~~-~~~i~~~S~~y~T~P~g~~~q~~F~N~v~~~~T~l~p~~Ll~~lk~IE~~ 121 (480)
++++|||||||+||+.+|+++|++.|+++ +..++.+|++|+|+|||+.+||+|+|+|+.++|+++|.+|++.||+||++
T Consensus 1 m~~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~~~S~~y~T~P~G~~~q~~FlN~v~~~~T~l~p~~LL~~l~~IE~~ 80 (160)
T 1cbk_A 1 MITAYIALGSNLNTPVEQLHAALKAISQLSNTHLVTTSSFYKSKPLGPQDQPDYVNAVAKIETELSPLKLLDELQRIENE 80 (160)
T ss_dssp CEEEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEEEECCCEEECCSSCSSSCCEEEEEEEEEECSCHHHHHHHHHHHHHH
T ss_pred CcEEEEEEeccchHHHHHHHHHHHHHhhCCCCcceEecccEEeCCCCCCCCCCceEEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 45799999999999999999999999997 66889999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCccchhhcccCCeeeeCCCccccccccccchhhhhhhhhhhCCCcccc
Q 038230 122 MGRTNGIRHGPRPIDLDILFYGRFSIHSDTLTVPHERIWERPFVVAPLLDLLGSSVESD 180 (480)
Q Consensus 122 ~GR~r~~~~~~r~iDiDIl~~~~~~~~~~~l~iPHp~~~~R~fVl~pl~el~~~~~~p~ 180 (480)
+||+|..||||||||||||+||+.++++++|+||||++++|+|||.||+||+|++.||.
T Consensus 81 ~GR~r~~r~gpRtlDlDIL~y~~~~~~~~~L~lPHp~~~eR~FVL~PL~ei~p~~~~P~ 139 (160)
T 1cbk_A 81 QGRVRLRRWGERTLDLDILLYGNEIIQNERLTIPHYDMHNREFVIVPLFEIASDLVLPN 139 (160)
T ss_dssp TTCCBCSTTSCBSCEEEEEEETTCCEESSSCEESCGGGGGCHHHHHHHHHHCTTCBCTT
T ss_pred cCCCCCCCCCCceeeEeeeccCCeEECCCCceecCcChhhChHHHHHHHHhCcCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999995
No 19
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=100.00 E-value=3.6e-45 Score=334.52 Aligned_cols=137 Identities=37% Similarity=0.568 Sum_probs=133.1
Q ss_pred eeEEEEeCCCcccHHHHHHHHHHHHHhc-CCcEEEeeCcEEeCCCCCCCCccceeeeeeeccCCCHHHHHHHHHHHHHHc
Q 038230 44 QEVVIAMGSNVGDRLCNFNEALQLMKKL-GVNITRHGCLYETEPAYVTDQPRFLNSAVRGVTKLGPHELLGVLKKIEKDM 122 (480)
Q Consensus 44 ~~~~l~LGSN~gd~~~~i~~A~~~L~~~-~~~i~~~S~~y~T~P~g~~~q~~F~N~v~~~~T~l~p~~Ll~~lk~IE~~~ 122 (480)
+++|||||||+||+.+|+++|++.|++. +..++.+|++|+|+|||+.+||+|+|+|+.++|+++|.+|++.||+||+++
T Consensus 1 ~~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~~~S~~y~T~P~G~~~q~~FlN~v~~~~T~l~p~~LL~~l~~IE~~~ 80 (158)
T 1f9y_A 1 TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQ 80 (158)
T ss_dssp CEEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEEEECCCEEECCSSCSSSCCEEEEEEEEEECSCHHHHHHHHHHHHHHT
T ss_pred CEEEEEEecCccCHHHHHHHHHHHHhcCCCCceeEECCeEEeCCCCCCCCCCceEEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 3799999999999999999999999987 678899999999999999999999999999999999999999999999999
Q ss_pred CCCCC-CCCCCCccchhhcccCCeeeeCCCccccccccccchhhhhhhhhhhCCCcccc
Q 038230 123 GRTNG-IRHGPRPIDLDILFYGRFSIHSDTLTVPHERIWERPFVVAPLLDLLGSSVESD 180 (480)
Q Consensus 123 GR~r~-~~~~~r~iDiDIl~~~~~~~~~~~l~iPHp~~~~R~fVl~pl~el~~~~~~p~ 180 (480)
||+|. .||||||||||||+||+.++++++|+||||++++|+|||.||+||+|+++||.
T Consensus 81 GR~r~~~~~gpRtlDlDIL~y~~~~~~~~~L~lPHp~~~eR~FVL~PL~eiap~~~~P~ 139 (158)
T 1f9y_A 81 GRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPD 139 (158)
T ss_dssp TCCCCSSTTCCCSCEEEEEEETTCCEECSSCEESCTTGGGCHHHHHHHHHHCTTCBCTT
T ss_pred CCCCCCCCCCCceEeEEEEeeCCEEecCCCccccCcChhhChHHHHHHHHhCcCCCCCC
Confidence 99998 99999999999999999999999999999999999999999999999999994
No 20
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=100.00 E-value=2.5e-45 Score=335.83 Aligned_cols=138 Identities=37% Similarity=0.551 Sum_probs=133.8
Q ss_pred ceeEEEEeCCCcccHHHHHHHHHHHHHhc-CCcEEEeeCcEEeCCCCCCCCccceeeeeeeccCCCHHHHHHHHHHHHHH
Q 038230 43 EQEVVIAMGSNVGDRLCNFNEALQLMKKL-GVNITRHGCLYETEPAYVTDQPRFLNSAVRGVTKLGPHELLGVLKKIEKD 121 (480)
Q Consensus 43 ~~~~~l~LGSN~gd~~~~i~~A~~~L~~~-~~~i~~~S~~y~T~P~g~~~q~~F~N~v~~~~T~l~p~~Ll~~lk~IE~~ 121 (480)
++++|||||||+||+.+|+++|++.|++. +..++.+|++|+|+|||+.+||+|+|+|+.++|+++|.+|++.||+||++
T Consensus 1 M~~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~~~S~~y~T~P~g~~~q~~FlN~v~~~~T~l~p~~LL~~l~~IE~~ 80 (159)
T 2qx0_A 1 MIRVYIALGSNLAMPLQQVSAAREALAHLPRSRLVACSPLYRTKPLGPQDQPDFLNAVVALDTSLPPEQLLDHTQAIERN 80 (159)
T ss_dssp CEEEEEEEEECSSSCHHHHHHHHHHHHTCTTEEEEEECCCEEECCCSSSCCCCEEEEEEEEEECSCHHHHHHHHHHHHHH
T ss_pred CcEEEEEEeCchhhHHHHHHHHHHHHhcCCCCceEEecCcEEeCCCCCCCCcccceEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 35799999999999999999999999997 56889999999999999999999999999999999999999999999999
Q ss_pred cCCCCC-CCCCCCccchhhcccCCeeeeCCCccccccccccchhhhhhhhhhhCCCcccc
Q 038230 122 MGRTNG-IRHGPRPIDLDILFYGRFSIHSDTLTVPHERIWERPFVVAPLLDLLGSSVESD 180 (480)
Q Consensus 122 ~GR~r~-~~~~~r~iDiDIl~~~~~~~~~~~l~iPHp~~~~R~fVl~pl~el~~~~~~p~ 180 (480)
+||+|. .||||||||||||+||+.++++++|+||||++++|+|||.||+||+|+++||.
T Consensus 81 ~GR~r~~~r~gpRtlDlDIL~y~~~~~~~~~L~lPHp~~~eR~FVL~PL~ei~p~~~~P~ 140 (159)
T 2qx0_A 81 QGRVRKEQRWGPRTLDLDIMLYGDQVIKTDRLTIPHYGLKAREFMLYPLADIAPDLIFPD 140 (159)
T ss_dssp HHHTTTCBTTSCCSCEEEEEEETTCCEESSSCEESCTTGGGCHHHHHHHHHHCTTCBCTT
T ss_pred cCCCCCCCCCCCceeEEeeeccCCeEeCCCCcccCCcChhhChHHHHHHHHhCcCCCCCC
Confidence 999998 99999999999999999999999999999999999999999999999999995
No 21
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=100.00 E-value=1.6e-44 Score=330.59 Aligned_cols=136 Identities=38% Similarity=0.572 Sum_probs=131.8
Q ss_pred eEEEEeCCCcccHHHHHHHHHHHHHhc-CCcEEEeeCcEEeCCCCCCCCccceeeeeeeccCCCHHHHHHHHHHHHHHcC
Q 038230 45 EVVIAMGSNVGDRLCNFNEALQLMKKL-GVNITRHGCLYETEPAYVTDQPRFLNSAVRGVTKLGPHELLGVLKKIEKDMG 123 (480)
Q Consensus 45 ~~~l~LGSN~gd~~~~i~~A~~~L~~~-~~~i~~~S~~y~T~P~g~~~q~~F~N~v~~~~T~l~p~~Ll~~lk~IE~~~G 123 (480)
.||||||||+||+.+|+++|++.|++. +..++.+|++|+|+|||+.+||+|+|+|+.++|+++|.+|++.||+||+++|
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~~~~v~~~S~~YeT~p~g~~~qp~FlN~vv~~~T~l~p~~LL~~l~~IE~~~G 81 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQG 81 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEEEECCCEEECCSSCSSSCCEEEEEEEEEECSCHHHHHHHHHHHHHHTT
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCCCCcEEEEeeEEEeCCCCCCcccchheeeeeeccCCCHHHHHHHHHHHHHHhC
Confidence 589999999999999999999999987 6688999999999999999999999999999999999999999999999999
Q ss_pred CCCC-CCCCCCccchhhcccCCeeeeCCCccccccccccchhhhhhhhhhhCCCcccc
Q 038230 124 RTNG-IRHGPRPIDLDILFYGRFSIHSDTLTVPHERIWERPFVVAPLLDLLGSSVESD 180 (480)
Q Consensus 124 R~r~-~~~~~r~iDiDIl~~~~~~~~~~~l~iPHp~~~~R~fVl~pl~el~~~~~~p~ 180 (480)
|+|. .+|||||||||||+|++.++++++|+||||++++|+|||.||+||+|+++||.
T Consensus 82 R~r~~~~~gpRtiDlDIl~y~~~~~~~~~L~lPHP~~~~R~FVL~PL~eI~P~~~hP~ 139 (158)
T 3ip0_A 82 RVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPD 139 (158)
T ss_dssp CCCCSSTTCCCSCEEEEEEETTCCEECSSCEESCTTGGGCHHHHHHHHHHCTTCBCTT
T ss_pred CCcCcccCCCccHhhhhhccCCEEEecCccCcCCCChhhCchHHHHHHHHCCCCCCCC
Confidence 9996 78999999999999999999999999999999999999999999999999994
No 22
>2cg8_A Dihydroneopterin aldolase 6-hydroxymethyl-7,8- dihydropterin synthase; lyase/transferase, folate biosynthesis, pyrophosphokinase, lyase; 2.9A {Streptococcus pneumoniae}
Probab=100.00 E-value=4.2e-44 Score=355.07 Aligned_cols=179 Identities=28% Similarity=0.392 Sum_probs=141.4
Q ss_pred cccccccccccCcccccccc--------ccccccc---ccCCCceeEEecccceeEEEEeCCCcccHHHHHHHHHHHHHh
Q 038230 2 NIFNLLLPTRRGVGAVMKGC--------RATCYSF---FHSSPETTVEVQSQEQEVVIAMGSNVGDRLCNFNEALQLMKK 70 (480)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~~~~l~LGSN~gd~~~~i~~A~~~L~~ 70 (480)
+.|+|+|.++..++....-. ..++|.. -.+..++++++....+++|||||||+||+.+|+++|++.|++
T Consensus 67 ~~f~LiE~lA~~Ia~~ll~~~~~v~~V~V~v~Kp~api~~~~~~v~Vei~R~~~~~~i~lGsN~gd~~~~l~~A~~~L~~ 146 (270)
T 2cg8_A 67 TSEDLIETVAYKLVERTFESYPLVQEMKLELKKPWAPVHLSLDTCSVTIHRRKQRAFIALGSNMGDKQANLKQAIDKLRA 146 (270)
T ss_dssp CCCSCHHHHHHHHHHHHHHHCTTCCEEEEEEEETTCSCCSCCSCEEEEEEEECEEEEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHhcCCceEEEEEEeeccccccccccccccccccccceEEEecCCCCCCHHHHHHHHHHHHhc
Confidence 46999999988887433221 1122222 146778999999999999999999999999999999999998
Q ss_pred cCCcEEEeeCcEEeCCCCCCCCccceeeeeeeccCCCHHHHHHHHHHHHHHcCCCCCCCCCCCccchhhcccCCeeeeCC
Q 038230 71 LGVNITRHGCLYETEPAYVTDQPRFLNSAVRGVTKLGPHELLGVLKKIEKDMGRTNGIRHGPRPIDLDILFYGRFSIHSD 150 (480)
Q Consensus 71 ~~~~i~~~S~~y~T~P~g~~~q~~F~N~v~~~~T~l~p~~Ll~~lk~IE~~~GR~r~~~~~~r~iDiDIl~~~~~~~~~~ 150 (480)
.+..++.+|++|+|+|||+.+||+|+|+|+.++|+++|.+|++.|++||+++||+|..||||||||||||+||+.+++++
T Consensus 147 ~~~~~~~~S~~y~t~p~g~~~q~~f~N~v~~~~t~l~p~~ll~~l~~iE~~~GR~r~~~~gpRtlDlDil~~~~~~~~~~ 226 (270)
T 2cg8_A 147 RGIHILKESSVLATEPWGGVEQDSFANQVVEVETWLPAQDLLETLLAIESELGRVREVHWGPRLIDLDLLFVEDQILYTD 226 (270)
T ss_dssp TTCEEEEECCCBC----------CCEEEEEEEEECSCHHHHHHHHHHHHHHTTC----------CEEEEEEETTCCCBCS
T ss_pred cCCeeEEecCCEecCCCCCCCCccceEEEEEEecCCCHHHHHHHHHHHHHHcCCCCCCCCCCcceeEeeeccCCeEeCCC
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccccchhhhhhhhhhhCCCcccc
Q 038230 151 TLTVPHERIWERPFVVAPLLDLLGSSVESD 180 (480)
Q Consensus 151 ~l~iPHp~~~~R~fVl~pl~el~~~~~~p~ 180 (480)
+|+||||++++|+|||.||+||+|++.||.
T Consensus 227 ~L~lPHp~~~~R~FVl~PL~ei~p~~~~p~ 256 (270)
T 2cg8_A 227 DLILPHPYIAERLFVLESLQEIAPHFIHPI 256 (270)
T ss_dssp SCBSSCTTGGGCHHHHHHHHHHCTTCBCTT
T ss_pred CcccCCcChhhCcHHHHHHHHhCcCCcCCC
Confidence 999999999999999999999999999995
No 23
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=100.00 E-value=1e-39 Score=329.81 Aligned_cols=232 Identities=15% Similarity=0.151 Sum_probs=188.6
Q ss_pred CCcEEEEEEecCCC------CCCCCCccCCHHHHHHHHHHHH-HcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 038230 209 LKTSVMGILNLTPD------SFSDGGKFQSVEAAVSQVRLMI-SEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAV 281 (480)
Q Consensus 209 ~~~~imGIlN~tpD------SFsdgg~~~~~e~a~~~A~~~v-~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l 281 (480)
.+...|+|.|..|| ||+++ ++. ++.++|++|+ ++|||+||||++||||++.+++++++.++ |+.|
T Consensus 53 ~p~iam~V~D~~pe~~~~v~~~~~~-~~~---~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~----V~~v 124 (323)
T 4djd_D 53 RPVIGMEVQDIVPDWPDVLKDPFTD-VIN---EPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVAT----VKEV 124 (323)
T ss_dssp CCEEEEEEESSCCSCCHHHHGGGTT-TTT---CHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHH----HHHH
T ss_pred CCeEEEEEecCCccchhhHHHHHHH-HHH---hHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHH----HHHH
Confidence 33459999999999 99999 343 4899999999 99999999999999999999999887664 4666
Q ss_pred HcCCcCCCCeEEEe-----CCCHHHHHHHHHcCCC---EEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccc
Q 038230 282 LTMPEMEGKLVSVD-----TFYSKVASEAVGKGAH---IVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEEN 353 (480)
Q Consensus 282 ~~~~~~~~~pISID-----T~~~~v~~aaL~~G~~---iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~ 353 (480)
++. .++||||| |++|+|+++||++|++ +|||+++++ .++|++++++||++||+||.. +
T Consensus 125 ~~~---~~vPlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~~~~-~~~m~~laa~~g~~vVlmh~~----d------ 190 (323)
T 4djd_D 125 LQA---VGVPLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAEQEN-YKSLTAACMVHKHNIIARSPL----D------ 190 (323)
T ss_dssp HHH---CCSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEBTTB-CHHHHHHHHHHTCEEEEECSS----C------
T ss_pred Hhh---CCceEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECCccc-HHHHHHHHHHhCCeEEEEccc----h------
Confidence 654 48999999 9999999999999854 999999875 589999999999999999952 1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC-CccChhHHHHHHHhcc--------cCCCcEEEeeccccccc
Q 038230 354 LQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG-FSKKAEHNLDILLGLA--------ASHAPILIGPSRKRFLG 424 (480)
Q Consensus 354 ~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG-f~k~~~~~~~~lr~l~--------~~g~Pil~G~SrKsfi~ 424 (480)
.++++++++.|.++||++++||+|||+| |+|+.++|++++++++ .+|+|+|+|+|||||++
T Consensus 191 ----------~~~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~GvSrksf~~ 260 (323)
T 4djd_D 191 ----------INICKQLNILINEMNLPLDHIVIDPSIGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTVGYEAWRA 260 (323)
T ss_dssp ----------HHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEHHHHHHTS
T ss_pred ----------HHHHHHHHHHHHHcCCCHHHEEEeCCCccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEecchhhhhh
Confidence 1567788899999999999999999999 9999999999988873 47999999999999998
Q ss_pred cccCCCC--------cCccc--HHHHHHHHHHHHcCCcEEEcCChHHHHHHHHHHHHHH
Q 038230 425 EICNRPS--------ADERD--PATIASITAGVLGGANIVRVHNIRDNLDAVKLCDSML 473 (480)
Q Consensus 425 ~v~g~~~--------~~~r~--~~t~a~~~~a~~~Ga~IlRvHdV~e~~~al~~~~ai~ 473 (480)
.-...+. .+.|. +.+. .++..+.+|++|+-.|+.+..+..-++.+.++
T Consensus 261 ke~~~~~~~~~~~g~~~~~~~~~E~~-~a~~~~~~~~~i~v~~~p~~~~~~~~~~~~l~ 318 (323)
T 4djd_D 261 KEASAPVSEYPGWGKETERGILWEAV-TATALLQAGAHILLMRHPEAVARVKENIDQLM 318 (323)
T ss_dssp HHHHCCTTTCGGGCCHHHHHHHHHHH-HHHHHHTTTCSEEEECCHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccchhhHHHHHH-HHHHHHHhcCCEEEEcCHHHHHHHHHHHHHHh
Confidence 7332221 11132 3333 35566779999999999665544444444443
No 24
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=99.91 E-value=3.5e-24 Score=223.29 Aligned_cols=176 Identities=17% Similarity=0.102 Sum_probs=145.9
Q ss_pred CCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCC--ch
Q 038230 247 GADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLD--PD 324 (480)
Q Consensus 247 GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d--~~ 324 (480)
|||.|-+=..|+.| +++.|+|+.+++. +++||||||++|+++++||+++++..|+|++.+.+ ++
T Consensus 127 ~~D~ial~~~s~dp-----------e~~~~vVk~V~e~---~dvPL~IDS~dpevleaALea~a~~~plI~sat~dn~e~ 192 (446)
T 4djd_C 127 TIQAIAIRHDADDP-----------AAFKAAVASVAAA---TQLNLVLMADDPDVLKEALAGVADRKPLLYAATGANYEA 192 (446)
T ss_dssp CCCEEEEECCSSST-----------HHHHHHHHHHHTT---CCSEEEEECSCHHHHHHHHGGGGGGCCEEEEECTTTHHH
T ss_pred cCcEEEEEeCCCCH-----------HHHHHHHHHHHHh---CCCCEEEecCCHHHHHHHHHhhcCcCCeeEecchhhHHH
Confidence 88888887776554 6788999999987 59999999999999999999977644444333334 58
Q ss_pred HHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCC-CCccChhHHHHHH
Q 038230 325 MYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGL-GFSKKAEHNLDIL 403 (480)
Q Consensus 325 m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgi-Gf~k~~~~~~~~l 403 (480)
|++++++|++++|+||.+ .+.+.+.++.+.++|++ +|++|||+ ||+++.+++.++
T Consensus 193 m~~lAa~y~~pVi~~~~d---------------------l~~lkelv~~a~~~GI~--~IvLDPG~~g~~~t~~~~~~i- 248 (446)
T 4djd_C 193 MTALAKENNCPLAVYGNG---------------------LEELAELVDKIVALGHK--QLVLDPGARETSRAIADFTQI- 248 (446)
T ss_dssp HHHHHHHTTCCEEEECSS---------------------HHHHHHHHHHHHHTTCC--CEEEECCCCSHHHHHHHHHHH-
T ss_pred HHHHHHHcCCcEEEEecc---------------------HHHHHHHHHHHHHCCCC--cEEECCCchhHHHHHHHHHHH-
Confidence 999999999999999851 26778999999999996 99999999 999999988877
Q ss_pred Hhc------ccCCCcEEEeeccccccccccCCCCcCcccHHHHHHHHHHHHcCCcEEEcCChHH--HHHHHHHHHHHHh
Q 038230 404 LGL------AASHAPILIGPSRKRFLGEICNRPSADERDPATIASITAGVLGGANIVRVHNIRD--NLDAVKLCDSMLT 474 (480)
Q Consensus 404 r~l------~~~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~IlRvHdV~e--~~~al~~~~ai~~ 474 (480)
|++ +.+|+|+++|+|| . ++|..+|.| +..+.+|++|+|+||+++ +...+.+.+.||.
T Consensus 249 Rr~AL~~~d~~LgyPvi~~~sr----------~--d~~~E~t~A--~~~i~kga~Iv~vhdv~~~~~~p~~~~r~niyt 313 (446)
T 4djd_C 249 RRLAIKKRFRSFGYPIIALTTA----------A--NPLDEVLQA--VNYVTKYASLVVLRTDAKEHLLPLLSWRQNLYT 313 (446)
T ss_dssp HHHHHHSCCGGGCSCBEEECCC----------S--SHHHHHHHH--HHHHHTTCSEEEESCCCHHHHHHHHHHHHHHTS
T ss_pred HHHhhhccCcccCCCEEeccCC----------c--cHHHHHHHH--HHHHHcCCeEEEEcCCcHHHhhhHHHHHhhccC
Confidence 665 4689999999997 1 267766766 788899999999999865 7888888888874
No 25
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=99.89 E-value=1.8e-22 Score=212.15 Aligned_cols=202 Identities=11% Similarity=0.079 Sum_probs=160.7
Q ss_pred CCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHH-----HHHcC----CCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH
Q 038230 208 SLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRL-----MISEG----ADMIDIGAQSTRPMATKISAEKELERLIPVL 278 (480)
Q Consensus 208 ~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~-----~v~~G----AdiIDIG~eStrP~a~~v~~~eE~~rl~~vi 278 (480)
..+|+|..-+.-+ .+.++..++++. ....| ||+|++|..++. .+++.|++
T Consensus 89 ~np~~ia~eI~D~----------~~~~~~~~~~~~~~~~~~~~~g~~~~aD~I~l~~~~~d-----------pe~~~~~V 147 (445)
T 2h9a_A 89 EHPCGLAILVEDT----------LSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGSSQD-----------AATFAKAV 147 (445)
T ss_dssp CSCCEEEEEEETT----------SCHHHHHHHHHHHHTCEEEETTEEEECCEEEEECTTCC-----------HHHHHHHH
T ss_pred CCCCeEEEEEecC----------CChHhHHHHHHHhhhHHHHhhcccccCcEEEEeCCCCC-----------HHHHHHHH
Confidence 3468888855443 345666667766 55578 999999985433 46788899
Q ss_pred HHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCC---EEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccc
Q 038230 279 EAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAH---IVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQ 355 (480)
Q Consensus 279 ~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~---iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~ 355 (480)
+.+++. +++||||| ++|+++++||++|++ ||||+++++. ++|++++++|++++|+..+ +
T Consensus 148 k~V~e~---~dvPlsID-~dp~vleaale~~~d~~pLIns~t~en~-~~~~~la~~y~~~vV~~~~-----~-------- 209 (445)
T 2h9a_A 148 ATAREV---TDLPFILI-GTPEQLAAALETEGANNPLLYAATADNY-EQMVELAKKYNVPLTVSAK-----G-------- 209 (445)
T ss_dssp HHHHHH---CCSCEEEE-SCHHHHHHHHHHHGGGCCEEEEECTTTH-HHHHHHHHHHTCCEEEECS-----S--------
T ss_pred HHHHHh---cCCCEEEE-CCHHHHHHHHHhcCCCCCEEEECCHHHH-HHHHHHHHHhCCeEEEEcC-----C--------
Confidence 999986 59999999 999999999999888 9999998864 9999999999999999552 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC-CccChhHHHHHHHhc------ccCCCcEEEeeccccccccccC
Q 038230 356 YDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG-FSKKAEHNLDILLGL------AASHAPILIGPSRKRFLGEICN 428 (480)
Q Consensus 356 ~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG-f~k~~~~~~~~lr~l------~~~g~Pil~G~SrKsfi~~v~g 428 (480)
.+.+.+++++|.++|++ +||+|||++ |+++.+ +++.+|+. +.+++|++.++||+
T Consensus 210 --------l~~l~~lv~~a~~~Gi~--~IiLDP~~~~~~~sl~-~~~~IR~~al~~~d~~lg~P~i~~vs~~-------- 270 (445)
T 2h9a_A 210 --------LDALAELVQKITALGYK--NLILDPQPENISEGLF-YQTQIRRLAIKKLFRPFGYPTIAFALDE-------- 270 (445)
T ss_dssp --------HHHHHHHHHHHHHTTCC--CEEEECCCSSHHHHHH-HHHHHHHHHHHSCCGGGCSCBEEECCCS--------
T ss_pred --------HHHHHHHHHHHHHCCCC--cEEEcCCchhHHHHHH-HHHHHHHhhhcCCCcccCCCeeecCCch--------
Confidence 24588999999999998 999999986 777666 88888886 25799999999987
Q ss_pred CCCcCcccHHHHHHHHHHHHcCCcEEEcCChHH--HHHHHHHHHHHH
Q 038230 429 RPSADERDPATIASITAGVLGGANIVRVHNIRD--NLDAVKLCDSML 473 (480)
Q Consensus 429 ~~~~~~r~~~t~a~~~~a~~~Ga~IlRvHdV~e--~~~al~~~~ai~ 473 (480)
+.|..+++ ++.++++||+|+|+||+++ ....+.+...||
T Consensus 271 ----d~~~ea~l--A~~~~~~GasIl~~~~~~~~~rlp~~~lR~~i~ 311 (445)
T 2h9a_A 271 ----NPYQAVME--ASVYIAKYAGIIVLNTVEPADILPLITLRLNIY 311 (445)
T ss_dssp ----SHHHHHHH--HHHHHHTTCSEEEECCCCHHHHHHHHHHHHHHT
T ss_pred ----hHHHHHHH--HHHHHHcCCeEEEecCccHHHhccHHHHhcccC
Confidence 23533344 4566999999999999765 455677777776
No 26
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=99.17 E-value=1.7e-09 Score=109.52 Aligned_cols=233 Identities=16% Similarity=0.203 Sum_probs=161.0
Q ss_pred cccccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHH
Q 038230 195 KRVLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERL 274 (480)
Q Consensus 195 ~r~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl 274 (480)
.+-..+|+..++.+.+..|..-.|... .|.++.+++++++.++|||+++++..+ +++ .
T Consensus 16 tr~v~VG~v~IGG~~Pi~VQSMtnt~T---------~D~~atv~Qi~~l~~aG~diVRvavp~----------~~~-a-- 73 (366)
T 3noy_A 16 TRQIRVGNVKIGGDAPIVVQSMTSTKT---------HDVEATLNQIKRLYEAGCEIVRVAVPH----------KED-V-- 73 (366)
T ss_dssp CCCEEETTEEESTTSCCEEEEECCSCT---------TCHHHHHHHHHHHHHTTCCEEEEECCS----------HHH-H--
T ss_pred ceEEEECCEEEcCCCcEEEEEecCCCC---------cCHHHHHHHHHHHHHcCCCEEEeCCCC----------hHH-H--
Confidence 455778999999988999999887665 799999999999999999999998632 233 2
Q ss_pred HHHHHHHHcCCcCCCCeEEEeC-CCHHHHHHHHHcCCCEEecCCCCCCC-----chHHHHHHhcCCCEEEEcCCC-CCCc
Q 038230 275 IPVLEAVLTMPEMEGKLVSVDT-FYSKVASEAVGKGAHIVNDVSAGQLD-----PDMYKVVAGLKVPYVAMHMRG-DPST 347 (480)
Q Consensus 275 ~~vi~~l~~~~~~~~~pISIDT-~~~~v~~aaL~~G~~iINdVsg~~~d-----~~m~~l~~~~~~~vVlmh~~g-~p~~ 347 (480)
..++.|++. .++||+.|. |++..+.+|+++|++.+ .|+.++.- +++++.|+++++|+.+--+.| .++.
T Consensus 74 -~al~~I~~~---~~vPlvaDiHf~~~lal~a~e~G~dkl-RINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ 148 (366)
T 3noy_A 74 -EALEEIVKK---SPMPVIADIHFAPSYAFLSMEKGVHGI-RINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKD 148 (366)
T ss_dssp -HHHHHHHHH---CSSCEEEECCSCHHHHHHHHHTTCSEE-EECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHH
T ss_pred -HHHHHHHhc---CCCCEEEeCCCCHHHHHHHHHhCCCeE-EECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHH
Confidence 345666665 489999995 99999999999999985 47765531 479999999999999855444 3433
Q ss_pred cccccccchh-hHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc-ccCCCcEEEeecccccccc
Q 038230 348 MQNEENLQYD-DVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL-AASHAPILIGPSRKRFLGE 425 (480)
Q Consensus 348 ~~~~~~~~~~-~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l-~~~g~Pil~G~SrKsfi~~ 425 (480)
..++ |. +..+.+.+.+.+.++.+++.|+. +|++..= +.+....++..|.+ +..+||+-+|+..
T Consensus 149 ll~~----yg~~~~eamVeSAl~~~~~~e~~gf~--~iviS~K---~S~v~~~i~ayr~la~~~dyPLHlGvTE------ 213 (366)
T 3noy_A 149 LLEK----YGYPSAEALAESALRWSEKFEKWGFT--NYKVSIK---GSDVLQNVRANLIFAERTDVPLHIGITE------ 213 (366)
T ss_dssp HHHH----HSSCCHHHHHHHHHHHHHHHHHTTCC--CEEEEEE---CSSHHHHHHHHHHHHHHCCCCEEECCSS------
T ss_pred HHHh----cCCCCHHHHHHHHHHHHHHHHhCCCC--eEEEeee---cCChHHHHHHHHHHHhccCCCEEEccCC------
Confidence 2221 21 23455678888999999999995 9998761 22334445555555 3479999999752
Q ss_pred ccCCCCcCcccHHHHHHHHHHHHcC-CcEEEcCC----hHHHHHHHHHHHHH
Q 038230 426 ICNRPSADERDPATIASITAGVLGG-ANIVRVHN----IRDNLDAVKLCDSM 472 (480)
Q Consensus 426 v~g~~~~~~r~~~t~a~~~~a~~~G-a~IlRvHd----V~e~~~al~~~~ai 472 (480)
. |. ..+-...+.+....++..| .|-+|+-= ++|.+-|..+.+++
T Consensus 214 A-G~--~~~G~ikSsigiG~LL~dGIGDTIRVSLt~~p~~Ev~va~~ILqsl 262 (366)
T 3noy_A 214 A-GM--GTKGIIKSSVGIGILLYMGIGDTVRVSLTDDPVVEVETAYEILKSL 262 (366)
T ss_dssp C-CS--HHHHHHHHHHHHHHHHHTTCCSEECCCCSSCHHHHHHHHHHHHHHT
T ss_pred C-CC--CcceeeehHHHHHHHHHhcccceEEEeCCCCcHHHHHHHHHHHHhc
Confidence 1 11 1111222333334444456 68888754 55565555555554
No 27
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=97.89 E-value=0.0011 Score=68.40 Aligned_cols=210 Identities=16% Similarity=0.201 Sum_probs=136.8
Q ss_pred cccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCC--CCC-CCCCCHHHHHHH
Q 038230 197 VLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQST--RPM-ATKISAEKELER 273 (480)
Q Consensus 197 ~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eSt--rP~-a~~v~~~eE~~r 273 (480)
.+.+++..++.+..+.|.|..-+. |.+.|++.|+.+.++||++|-.+.-.. .|+ ....+ .+.++.
T Consensus 130 ~i~i~~~~iG~~~~~~Iigpcsve-----------s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~-~egl~~ 197 (385)
T 3nvt_A 130 IVTVKGLPIGNGEPVFVFGPCSVE-----------SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLG-LEGLKI 197 (385)
T ss_dssp CEEETTEEETSSSCEEEEECSBCC-----------CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCT-HHHHHH
T ss_pred EEEECCEEECCCCeEEEEEeCCcC-----------CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCC-HHHHHH
Confidence 456777777766668888854332 789999999999999999999997442 233 22233 244433
Q ss_pred HHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccc
Q 038230 274 LIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEEN 353 (480)
Q Consensus 274 l~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~ 353 (480)
+ ..+.+. .++|+.-|-++++.++.+.+. ++++-=-++....-.++..++++|.||++-. |.-.|+
T Consensus 198 L----~~~~~~---~Gl~~~te~~d~~~~~~l~~~-vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~--G~~~t~----- 262 (385)
T 3nvt_A 198 L----KRVSDE---YGLGVISEIVTPADIEVALDY-VDVIQIGARNMQNFELLKAAGRVDKPILLKR--GLSATI----- 262 (385)
T ss_dssp H----HHHHHH---HTCEEEEECCSGGGHHHHTTT-CSEEEECGGGTTCHHHHHHHHTSSSCEEEEC--CTTCCH-----
T ss_pred H----HHHHHH---cCCEEEEecCCHHHHHHHHhh-CCEEEECcccccCHHHHHHHHccCCcEEEec--CCCCCH-----
Confidence 3 333333 389999999999999999988 9998844443334688999999999999854 332221
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEE-ecCCC-Ccc-C-hhHHHHHHHhcc-cCCCcEEEeeccccccccccC
Q 038230 354 LQYDDVCKQVASELYSKVRDAELSGIPAWRIII-DPGLG-FSK-K-AEHNLDILLGLA-ASHAPILIGPSRKRFLGEICN 428 (480)
Q Consensus 354 ~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DPgiG-f~k-~-~~~~~~~lr~l~-~~g~Pil~G~SrKsfi~~v~g 428 (480)
+.....++.+.+.|.+ +|+| .=|+- |.. . ..-|+..+..++ .+++|+++.+|. -.|
T Consensus 263 -----------~e~~~Ave~i~~~Gn~--~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th------~~G 323 (385)
T 3nvt_A 263 -----------EEFIGAAEYIMSQGNG--KIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTH------STG 323 (385)
T ss_dssp -----------HHHHHHHHHHHTTTCC--CEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHH------HHC
T ss_pred -----------HHHHHHHHHHHHcCCC--eEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCC------CCC
Confidence 3345677778888975 5554 54653 322 1 112343343332 369999877652 112
Q ss_pred CCCcCcccHHHHHHHHHHHHcCCc--EEEcCC
Q 038230 429 RPSADERDPATIASITAGVLGGAN--IVRVHN 458 (480)
Q Consensus 429 ~~~~~~r~~~t~a~~~~a~~~Ga~--IlRvHd 458 (480)
+|..... ++..|+..||+ +|-+|-
T Consensus 324 -----~r~~v~~-~a~AAvA~GA~gl~iE~H~ 349 (385)
T 3nvt_A 324 -----RKDLLLP-CAKAALAIEADGVMAEVHP 349 (385)
T ss_dssp -----CGGGHHH-HHHHHHHTTCSEEEEEBCS
T ss_pred -----ccchHHH-HHHHHHHhCCCEEEEEecC
Confidence 3444322 23457789999 999994
No 28
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=97.83 E-value=0.0004 Score=68.34 Aligned_cols=182 Identities=16% Similarity=0.217 Sum_probs=111.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHH----------HHHHHHHHHHHHcCCcCCCCeEEEeCC-C
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKE----------LERLIPVLEAVLTMPEMEGKLVSVDTF-Y 298 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE----------~~rl~~vi~~l~~~~~~~~~pISIDT~-~ 298 (480)
+.+.+..++.++.+.+.|||+|.+|...+-|-++....+.- ++.+..+++.+++.. .++|+-+=|| |
T Consensus 28 dP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~--~~~Pivlm~Y~n 105 (267)
T 3vnd_A 28 DPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQH--PDMPIGLLLYAN 105 (267)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--TTCCEEEEECHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--CCCCEEEEecCc
Confidence 35789999999999999999999999777776553222221 125567788887641 3789988888 5
Q ss_pred H-------HHHHHHHHcCCC--EEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHH
Q 038230 299 S-------KVASEAVGKGAH--IVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYS 369 (480)
Q Consensus 299 ~-------~v~~aaL~~G~~--iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~ 369 (480)
| +-++++.++|++ +|.|..-++ ..++.+.++++|...|.+-. |.|.. +
T Consensus 106 pv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee-~~~~~~~~~~~gl~~i~lia---P~t~~-------------------e 162 (267)
T 3vnd_A 106 LVFANGIDEFYTKAQAAGVDSVLIADVPVEE-SAPFSKAAKAHGIAPIFIAP---PNADA-------------------D 162 (267)
T ss_dssp HHHHHCHHHHHHHHHHHTCCEEEETTSCGGG-CHHHHHHHHHTTCEEECEEC---TTCCH-------------------H
T ss_pred HHHHhhHHHHHHHHHHcCCCEEEeCCCCHhh-HHHHHHHHHHcCCeEEEEEC---CCCCH-------------------H
Confidence 4 346777888998 577776433 47899999999998874442 32211 2
Q ss_pred HHHHHH--HCCCCCCCEEE---ecCCCCccC-hhHHHHHHHhcc-cCCCcEEEeeccccccccccCCCCcCcccHHHHHH
Q 038230 370 KVRDAE--LSGIPAWRIII---DPGLGFSKK-AEHNLDILLGLA-ASHAPILIGPSRKRFLGEICNRPSADERDPATIAS 442 (480)
Q Consensus 370 ~i~~a~--~~Gi~~~~Iil---DPgiGf~k~-~~~~~~~lr~l~-~~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~ 442 (480)
++.... ..|+ |+. -+..|-.+. .....+++++++ ..+.|+++|. |-.+ ..++
T Consensus 163 ri~~i~~~~~gf----vY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGf----------GI~~-----~e~~-- 221 (267)
T 3vnd_A 163 TLKMVSEQGEGY----TYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGF----------GIAE-----PEQV-- 221 (267)
T ss_dssp HHHHHHHHCCSC----EEESCCCCCC--------CHHHHHHHHHTTTCCCEEECS----------SCCS-----HHHH--
T ss_pred HHHHHHHhCCCc----EEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEEC----------CcCC-----HHHH--
Confidence 222222 2234 555 333443221 222345666663 4689999984 3321 1222
Q ss_pred HHHHHHcCCcEEEcCC
Q 038230 443 ITAGVLGGANIVRVHN 458 (480)
Q Consensus 443 ~~~a~~~Ga~IlRvHd 458 (480)
..++..|||.+-|=.
T Consensus 222 -~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 222 -RAAIKAGAAGAISGS 236 (267)
T ss_dssp -HHHHHTTCSEEEECH
T ss_pred -HHHHHcCCCEEEECH
Confidence 236678888887754
No 29
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=97.79 E-value=0.0014 Score=64.14 Aligned_cols=180 Identities=16% Similarity=0.183 Sum_probs=106.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHH------------HHHHHHHHHHHHcCCcCCCCeEEEeC-CC
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKE------------LERLIPVLEAVLTMPEMEGKLVSVDT-FY 298 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE------------~~rl~~vi~~l~~~~~~~~~pISIDT-~~ 298 (480)
+.+..++.++.+.+.|||+|.+|..-+.|-++. +..+ +.....+++.+++.. .++|+-+=+ ++
T Consensus 29 ~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG--~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~--~~~Pv~lm~y~n 104 (268)
T 1qop_A 29 GIEQSLKIIDTLIDAGADALELGVPFSDPLADG--PTIQNANLRAFAAGVTPAQCFEMLAIIREKH--PTIPIGLLMYAN 104 (268)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCC--HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--SSSCEEEEECHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCccCCC--HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--CCCCEEEEEccc
Confidence 668889999999999999999998665554332 2222 345567788888651 267876644 34
Q ss_pred H-------HHHHHHHHcCCC--EEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHH
Q 038230 299 S-------KVASEAVGKGAH--IVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYS 369 (480)
Q Consensus 299 ~-------~v~~aaL~~G~~--iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~ 369 (480)
| +-++++.++|++ ++.|....+ ..+..+.++++|..++.+-. |.+.. +.+++
T Consensus 105 ~v~~~g~~~~~~~~~~aGadgii~~d~~~e~-~~~~~~~~~~~g~~~i~l~~---p~t~~---------------~~i~~ 165 (268)
T 1qop_A 105 LVFNNGIDAFYARCEQVGVDSVLVADVPVEE-SAPFRQAALRHNIAPIFICP---PNADD---------------DLLRQ 165 (268)
T ss_dssp HHHTTCHHHHHHHHHHHTCCEEEETTCCGGG-CHHHHHHHHHTTCEEECEEC---TTCCH---------------HHHHH
T ss_pred HHHHhhHHHHHHHHHHcCCCEEEEcCCCHHH-HHHHHHHHHHcCCcEEEEEC---CCCCH---------------HHHHH
Confidence 3 677888889999 344444322 36789999999988665432 22211 11112
Q ss_pred HHHHHHHCCCCCCCEEEecCCCCc-c--C-hhHHHHHHHhc-ccCCCcEEEeeccccccccccCCCCcCcccHHHHHHHH
Q 038230 370 KVRDAELSGIPAWRIIIDPGLGFS-K--K-AEHNLDILLGL-AASHAPILIGPSRKRFLGEICNRPSADERDPATIASIT 444 (480)
Q Consensus 370 ~i~~a~~~Gi~~~~IilDPgiGf~-k--~-~~~~~~~lr~l-~~~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~ 444 (480)
..+. ..|+ +++.-..|++ . . .....+.++++ +..++|+.+|. |-.+ ..++ .
T Consensus 166 i~~~--~~g~----v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vgg----------GI~t-----~e~~---~ 221 (268)
T 1qop_A 166 VASY--GRGY----TYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGF----------GISS-----PEQV---S 221 (268)
T ss_dssp HHHH--CCSC----EEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEES----------SCCS-----HHHH---H
T ss_pred HHhh--CCCc----EEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEEC----------CCCC-----HHHH---H
Confidence 2211 2233 6776655552 1 1 11224555555 24589999874 3321 1222 3
Q ss_pred HHHHcCCcEEEcCC
Q 038230 445 AGVLGGANIVRVHN 458 (480)
Q Consensus 445 ~a~~~Ga~IlRvHd 458 (480)
.++..|||.+-|=.
T Consensus 222 ~~~~agAD~vVVGS 235 (268)
T 1qop_A 222 AAVRAGAAGAISGS 235 (268)
T ss_dssp HHHHTTCSEEEECH
T ss_pred HHHHcCCCEEEECh
Confidence 45778898887755
No 30
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.79 E-value=0.00068 Score=66.83 Aligned_cols=184 Identities=13% Similarity=0.187 Sum_probs=112.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHH----------HHHHHHHHHHHHcCCcCCCCeEEEeCCCH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKE----------LERLIPVLEAVLTMPEMEGKLVSVDTFYS 299 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE----------~~rl~~vi~~l~~~~~~~~~pISIDT~~~ 299 (480)
+-+.+..++.++.+.+.|||+|.+|...+-|-++...-+.- ++.+...++.+++.. .++|+.+=||.-
T Consensus 30 dP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~--~~~Pivlm~Y~n 107 (271)
T 3nav_A 30 DPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARN--PETPIGLLMYAN 107 (271)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--TTSCEEEEECHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--CCCCEEEEecCc
Confidence 45889999999999999999999999877776654333321 125566777777531 378988877643
Q ss_pred --------HHHHHHHHcCCC--EEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHH
Q 038230 300 --------KVASEAVGKGAH--IVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYS 369 (480)
Q Consensus 300 --------~v~~aaL~~G~~--iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~ 369 (480)
+-+++|.++|++ ++.|..-++ ..++.+.+++||..+|.+-. |.+.. +
T Consensus 108 ~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee-~~~~~~~~~~~gl~~I~lva---p~t~~-------------------e 164 (271)
T 3nav_A 108 LVYARGIDDFYQRCQKAGVDSVLIADVPTNE-SQPFVAAAEKFGIQPIFIAP---PTASD-------------------E 164 (271)
T ss_dssp HHHHTCHHHHHHHHHHHTCCEEEETTSCGGG-CHHHHHHHHHTTCEEEEEEC---TTCCH-------------------H
T ss_pred HHHHHhHHHHHHHHHHCCCCEEEECCCCHHH-HHHHHHHHHHcCCeEEEEEC---CCCCH-------------------H
Confidence 246777778988 577776543 47799999999999885543 32211 2
Q ss_pred HHHHHHHCCCCCCCEEEecCCCC-ccC---hhHHHHHHHhcc-cCCCcEEEeeccccccccccCCCCcCcccHHHHHHHH
Q 038230 370 KVRDAELSGIPAWRIIIDPGLGF-SKK---AEHNLDILLGLA-ASHAPILIGPSRKRFLGEICNRPSADERDPATIASIT 444 (480)
Q Consensus 370 ~i~~a~~~Gi~~~~IilDPgiGf-~k~---~~~~~~~lr~l~-~~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~ 444 (480)
++....+.+-. =|+.=...|. |.. ...-.+++++++ ..+.|+++|. |-.++ .++ .
T Consensus 165 ri~~i~~~~~g--fiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGf----------GIst~-----e~~---~ 224 (271)
T 3nav_A 165 TLRAVAQLGKG--YTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGF----------GISEP-----AQV---K 224 (271)
T ss_dssp HHHHHHHHCCS--CEEECCCC--------CCHHHHHHHHHHHHTTCCCEEECS----------SCCSH-----HHH---H
T ss_pred HHHHHHHHCCC--eEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEEC----------CCCCH-----HHH---H
Confidence 22222222222 1565444443 211 122345666663 4589999974 33221 122 2
Q ss_pred HHHHcCCcEEEcCC
Q 038230 445 AGVLGGANIVRVHN 458 (480)
Q Consensus 445 ~a~~~Ga~IlRvHd 458 (480)
.++..|||.+-|=.
T Consensus 225 ~~~~~gADgvIVGS 238 (271)
T 3nav_A 225 QAIEAGAAGAISGS 238 (271)
T ss_dssp HHHHTTCSEEEESH
T ss_pred HHHHcCCCEEEECH
Confidence 36677888777644
No 31
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=97.72 E-value=0.00078 Score=65.84 Aligned_cols=104 Identities=17% Similarity=0.310 Sum_probs=70.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHH------------HHHHHHHHHHHHcCCcCCCCeEEEeCCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKE------------LERLIPVLEAVLTMPEMEGKLVSVDTFY 298 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE------------~~rl~~vi~~l~~~~~~~~~pISIDT~~ 298 (480)
.+.+..++.++.+.+.|||+|.||..-+.|-++. +..+ ++++..+++.+++.. .++|+.+=+|.
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adg--p~i~~a~~~al~~G~~~~~~~~~v~~ir~~~--~~~Pi~~m~y~ 103 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADG--PTIQVAHEVALKNGIRFEDVLELSETLRKEF--PDIPFLLMTYY 103 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSC--HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--TTSCEEEECCH
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCCCCccccc--HHHHHHHHHHHHcCCCHHHHHHHHHHHHhhc--CCCCEEEEecC
Confidence 4778899999999999999999998665554432 1111 134566788888651 16888886554
Q ss_pred H--------HHHHHHHHcCCCE--EecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 299 S--------KVASEAVGKGAHI--VNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 299 ~--------~v~~aaL~~G~~i--INdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
. +-++.|.++|++- +.|+..++ ..+..+.++++|..+|.+
T Consensus 104 n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee-~~~~~~~~~~~gl~~i~l 153 (262)
T 2ekc_A 104 NPIFRIGLEKFCRLSREKGIDGFIVPDLPPEE-AEELKAVMKKYVLSFVPL 153 (262)
T ss_dssp HHHHHHCHHHHHHHHHHTTCCEEECTTCCHHH-HHHHHHHHHHTTCEECCE
T ss_pred cHHHHhhHHHHHHHHHHcCCCEEEECCCCHHH-HHHHHHHHHHcCCcEEEE
Confidence 3 5567788889983 33433211 256788889999886643
No 32
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=97.54 E-value=0.0026 Score=65.53 Aligned_cols=207 Identities=16% Similarity=0.133 Sum_probs=137.2
Q ss_pred ccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCC----CCC---C-------
Q 038230 198 LPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTR----PMA---T------- 263 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStr----P~a---~------- 263 (480)
++++++.++.+.++.|++-+-..- ..|.+.|.+.++...++|||.+=.+.--.+ |.+ .
T Consensus 16 ~~~~~~~ig~~~~~~IIAEiG~NH--------~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~ 87 (385)
T 1vli_A 16 FQIANKTVGKDAPVFIIAEAGINH--------DGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDV 87 (385)
T ss_dssp EEETTEEEETTSCCEEEEEEETTT--------TTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CC
T ss_pred eeECCEEeCCCCCcEEEEeecCcc--------cccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCc
Confidence 567777777777899999773332 248899999999999999999999853221 221 0
Q ss_pred ---------CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCC
Q 038230 264 ---------KISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKV 334 (480)
Q Consensus 264 ---------~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~ 334 (480)
..+ +| .+..+.+.-++. ++++.-.-++++.++...+.|++++-=-|+.-.+-.+++.+++.|-
T Consensus 88 ~~ye~~~~~~l~-~e---~~~~L~~~~~~~----Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gK 159 (385)
T 1vli_A 88 SIFSLVQSMEMP-AE---WILPLLDYCREK----QVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNR 159 (385)
T ss_dssp CHHHHGGGBSSC-GG---GHHHHHHHHHHT----TCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCS
T ss_pred cHHHHHHhcCCC-HH---HHHHHHHHHHHc----CCcEEEccCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCC
Confidence 011 22 333333444443 8999999999999999888899988744443335678999999999
Q ss_pred CEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCC-CCccCh-hHHHHHHHhc-ccC-C
Q 038230 335 PYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGL-GFSKKA-EHNLDILLGL-AAS-H 410 (480)
Q Consensus 335 ~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgi-Gf~k~~-~~~~~~lr~l-~~~-g 410 (480)
||++.. |.. |+ +++...++.+.+.|.+ +|+|==++ +|.... .-|+..+..+ +.+ +
T Consensus 160 PViLSt--Gma-Tl----------------~Ei~~Ave~i~~~Gn~--~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~ 218 (385)
T 1vli_A 160 PMIFST--AGA-EI----------------SDVHEAWRTIRAEGNN--QIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPE 218 (385)
T ss_dssp CEEEEC--TTC-CH----------------HHHHHHHHHHHTTTCC--CEEEEEECSSSSCCGGGCCTTHHHHHHHHSTT
T ss_pred eEEEEC--CCC-CH----------------HHHHHHHHHHHHCCCC--cEEEEeccCCCCCChhhcCHHHHHHHHHHcCC
Confidence 999843 443 33 3345777788888885 67663333 343322 3345555555 345 8
Q ss_pred CcEEEeeccccccccccCCCCcCcccHHHHHHHHHHHHcCCcEEEcCC
Q 038230 411 APILIGPSRKRFLGEICNRPSADERDPATIASITAGVLGGANIVRVHN 458 (480)
Q Consensus 411 ~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~IlRvHd 458 (480)
+|+ |.| .+-+| + ..++..|+..||+||-+|-
T Consensus 219 lpV--G~S-----dHt~G------~----~~~~~AAvAlGA~iIEkHf 249 (385)
T 1vli_A 219 AVI--GFS-----DHSEH------P----TEAPCAAVRLGAKLIEKHF 249 (385)
T ss_dssp SEE--EEE-----ECCSS------S----SHHHHHHHHTTCSEEEEEB
T ss_pred CCE--EeC-----CCCCC------c----hHHHHHHHHcCCCEEEeCC
Confidence 887 776 22222 1 2334567789999999994
No 33
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=97.54 E-value=0.0052 Score=61.15 Aligned_cols=173 Identities=14% Similarity=0.189 Sum_probs=112.1
Q ss_pred EEecCC-CCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE
Q 038230 216 ILNLTP-DSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPM-ATKISAEKELERLIPVLEAVLTMPEMEGKLVS 293 (480)
Q Consensus 216 IlN~tp-DSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~-a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS 293 (480)
|+..|+ |-+.-.+..++.++.++.++.+.+.|.++|.+|.-++ |. .......+ .+++.+.+. .+++++
T Consensus 11 i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~-~~~~~~~~d~~------~~~~~~~~~---~~~~~~ 80 (302)
T 2ftp_A 11 LVEVGPRDGLQNEKQPIEVADKIRLVDDLSAAGLDYIEVGSFVS-PKWVPQMAGSA------EVFAGIRQR---PGVTYA 80 (302)
T ss_dssp EEECTTTHHHHTSSSCCCHHHHHHHHHHHHHTTCSEEEEEECSC-TTTCGGGTTHH------HHHHHSCCC---TTSEEE
T ss_pred EEeCCCCCCccCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcC-ccccccccCHH------HHHHHhhhc---CCCEEE
Confidence 666675 5544446678999999999999999999999996322 22 11111111 234555544 478888
Q ss_pred EeCCCHHHHHHHHHcCCCEEecCCCCCCC------------------chHHHHHHhcCCCEE--EEcCCCCCCccccccc
Q 038230 294 VDTFYSKVASEAVGKGAHIVNDVSAGQLD------------------PDMYKVVAGLKVPYV--AMHMRGDPSTMQNEEN 353 (480)
Q Consensus 294 IDT~~~~v~~aaL~~G~~iINdVsg~~~d------------------~~m~~l~~~~~~~vV--lmh~~g~p~~~~~~~~ 353 (480)
+=..+.+-++.|+++|++.|.=..+.. + .++++.++++|..|- +++.-|.|.. .+.+
T Consensus 81 ~l~~~~~~i~~a~~aG~~~v~i~~~~s-~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~--~~~~ 157 (302)
T 2ftp_A 81 ALAPNLKGFEAALESGVKEVAVFAAAS-EAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYD--GDVD 157 (302)
T ss_dssp EECCSHHHHHHHHHTTCCEEEEEEESC-HHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTT--BCCC
T ss_pred EEeCCHHHHHHHHhCCcCEEEEEEecC-HHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC--CCCC
Confidence 777899999999999999887322221 1 356888889998775 4555443421 1111
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHCCCCCCCE-EEecCCCCccChhHHHHHHHhcc-cC-CCcEEE
Q 038230 354 LQYDDVCKQVASELYSKVRDAELSGIPAWRI-IIDPGLGFSKKAEHNLDILLGLA-AS-HAPILI 415 (480)
Q Consensus 354 ~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~I-ilDPgiGf~k~~~~~~~~lr~l~-~~-g~Pil~ 415 (480)
.+++.+.++.+.+.|++ .| +-|- .|. .++.+..++++.++ .. +.|+-+
T Consensus 158 ----------~~~~~~~~~~~~~~G~d--~i~l~DT-~G~-~~P~~~~~lv~~l~~~~~~~~l~~ 208 (302)
T 2ftp_A 158 ----------PRQVAWVARELQQMGCY--EVSLGDT-IGV-GTAGATRRLIEAVASEVPRERLAG 208 (302)
T ss_dssp ----------HHHHHHHHHHHHHTTCS--EEEEEES-SSC-CCHHHHHHHHHHHTTTSCGGGEEE
T ss_pred ----------HHHHHHHHHHHHHcCCC--EEEEeCC-CCC-cCHHHHHHHHHHHHHhCCCCeEEE
Confidence 15667778888899997 44 3354 444 35667788888873 33 566643
No 34
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=97.37 E-value=0.0032 Score=62.51 Aligned_cols=172 Identities=17% Similarity=0.186 Sum_probs=106.8
Q ss_pred EEecCC-CCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE
Q 038230 216 ILNLTP-DSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV 294 (480)
Q Consensus 216 IlN~tp-DSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI 294 (480)
|+..|+ |-..--+..++.++.++.++++.+.|.++|++|.-++ |...+.-.+. + .+++.+++. .+++++.
T Consensus 8 i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~-~~~~p~~~d~--~---~~~~~~~~~---~~~~~~~ 78 (298)
T 2cw6_A 8 IVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVS-PKWVPQMGDH--T---EVLKGIQKF---PGINYPV 78 (298)
T ss_dssp EEECTTTHHHHTCSSCCCHHHHHHHHHHHHHTTCSEECCEECCC-TTTCGGGTTH--H---HHHHHSCCC---TTCBCCE
T ss_pred EEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcC-cccccccCCH--H---HHHHHHhhC---CCCEEEE
Confidence 555665 4333335568899999999999999999999996322 3211110111 1 234455543 3677888
Q ss_pred eCCCHHHHHHHHHcCCCEEecCCCCCCC------------------chHHHHHHhcCCCEE--EEcCCCCCCcccccccc
Q 038230 295 DTFYSKVASEAVGKGAHIVNDVSAGQLD------------------PDMYKVVAGLKVPYV--AMHMRGDPSTMQNEENL 354 (480)
Q Consensus 295 DT~~~~v~~aaL~~G~~iINdVsg~~~d------------------~~m~~l~~~~~~~vV--lmh~~g~p~~~~~~~~~ 354 (480)
...+.+-++.|+++|++.|.=..+.. + .++++.++++|..+. ++..-|-|... +.+
T Consensus 79 l~~~~~~i~~a~~ag~~~v~i~~~~s-d~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~--~~~- 154 (298)
T 2cw6_A 79 LTPNLKGFEAAVAAGAKEVVIFGAAS-ELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEG--KIS- 154 (298)
T ss_dssp ECCSHHHHHHHHHTTCSEEEEEEESC-HHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTB--SCC-
T ss_pred EcCCHHhHHHHHHCCCCEEEEEecCC-HHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCC--CCC-
Confidence 88999999999999999876332221 1 235788888998775 34333434211 111
Q ss_pred chhhHHHHHHHHHHHHHHHHHHCCCCCCCE-EEecCCCCccChhHHHHHHHhcc--cCCCcE
Q 038230 355 QYDDVCKQVASELYSKVRDAELSGIPAWRI-IIDPGLGFSKKAEHNLDILLGLA--ASHAPI 413 (480)
Q Consensus 355 ~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~I-ilDPgiGf~k~~~~~~~~lr~l~--~~g~Pi 413 (480)
.+++.+.++.+.+.|.. .| +-|- +|.. ++.+..++++.++ .++.|+
T Consensus 155 ---------~~~~~~~~~~~~~~Ga~--~i~l~DT-~G~~-~P~~~~~lv~~l~~~~~~~~i 203 (298)
T 2cw6_A 155 ---------PAKVAEVTKKFYSMGCY--EISLGDT-IGVG-TPGIMKDMLSAVMQEVPLAAL 203 (298)
T ss_dssp ---------HHHHHHHHHHHHHTTCS--EEEEEET-TSCC-CHHHHHHHHHHHHHHSCGGGE
T ss_pred ---------HHHHHHHHHHHHHcCCC--EEEecCC-CCCc-CHHHHHHHHHHHHHhCCCCeE
Confidence 15677888889999986 44 5565 4443 3555566676662 234554
No 35
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=97.37 E-value=0.011 Score=60.14 Aligned_cols=205 Identities=17% Similarity=0.130 Sum_probs=133.4
Q ss_pred ccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCC----CCCC---C-------
Q 038230 198 LPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQST----RPMA---T------- 263 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eSt----rP~a---~------- 263 (480)
+.++++.++.+.++.|++-+-..- ..|.|.|.+.++...++|||.+=.+.-.. .|.+ .
T Consensus 7 i~i~~~~iG~~~~~~iIAe~g~NH--------~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~ 78 (349)
T 2wqp_A 7 FKIGNRSVGYNHEPLIICEIGINH--------EGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVS 78 (349)
T ss_dssp EEETTEEEETTSCCEEEEEEETTT--------TTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSC
T ss_pred EEECCEEECCCCceEEEEecCCcc--------cCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCcc
Confidence 556777777766789998553322 24889999999999999999999983211 1111 0
Q ss_pred --------CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCC
Q 038230 264 --------KISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVP 335 (480)
Q Consensus 264 --------~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~ 335 (480)
..+ +|+++ .+.+.-++. ++++.-.-++++.++...+.|++++-=-|+.-.+-.+++-+++.|-|
T Consensus 79 ~y~~~~~~~l~-~e~~~---~L~~~~~~~----Gi~~~st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkP 150 (349)
T 2wqp_A 79 IYEIMERCALN-EEDEI---KLKEYVESK----GMIFISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKP 150 (349)
T ss_dssp HHHHHHHHCCC-HHHHH---HHHHHHHHT----TCEEEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSC
T ss_pred HHHHHHHhCCC-HHHHH---HHHHHHHHh----CCeEEEeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCe
Confidence 122 23333 333444443 99999999999999999889999887444433356789999999999
Q ss_pred EEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCC-CCccCh-hHHHHHHHhc-ccC-CC
Q 038230 336 YVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGL-GFSKKA-EHNLDILLGL-AAS-HA 411 (480)
Q Consensus 336 vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgi-Gf~k~~-~~~~~~lr~l-~~~-g~ 411 (480)
|++ ++|.. |+ +++...++.+.+.|- +|+|==++ +|.... .-|+..+..+ +.+ ++
T Consensus 151 viL--stGma-t~----------------~Ei~~Ave~i~~~G~---~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~l 208 (349)
T 2wqp_A 151 IIL--STGMN-SI----------------ESIKKSVEIIREAGV---PYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDA 208 (349)
T ss_dssp EEE--ECTTC-CH----------------HHHHHHHHHHHHHTC---CEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTS
T ss_pred EEE--ECCCC-CH----------------HHHHHHHHHHHHcCC---CEEEEeccCCCCCChhhcCHHHHHHHHHHCCCC
Confidence 998 34553 43 334566777777887 56553343 343332 3355556655 345 88
Q ss_pred cEEEeeccccccccccCCCCcCcccHHHHHHHHHHHHcCCcEEEcCC
Q 038230 412 PILIGPSRKRFLGEICNRPSADERDPATIASITAGVLGGANIVRVHN 458 (480)
Q Consensus 412 Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~IlRvHd 458 (480)
|+ |.| ++-+| ..++..|+..||+||-+|-
T Consensus 209 pV--g~s-----dHt~G-----------~~~~~AAvAlGA~iIEkH~ 237 (349)
T 2wqp_A 209 II--GLS-----DHTLD-----------NYACLGAVALGGSILERHF 237 (349)
T ss_dssp EE--EEE-----CCSSS-----------SHHHHHHHHHTCCEEEEEB
T ss_pred CE--EeC-----CCCCc-----------HHHHHHHHHhCCCEEEeCC
Confidence 87 666 11112 2334567788999999993
No 36
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=97.35 E-value=0.063 Score=54.64 Aligned_cols=289 Identities=18% Similarity=0.175 Sum_probs=161.7
Q ss_pred ceeeeeeeccCCCHHHHHHHHHHHHHHcCCCC-CCCCCCCccchhhcccCCeee-eCCCc-cccccccccchhhhhhhhh
Q 038230 95 FLNSAVRGVTKLGPHELLGVLKKIEKDMGRTN-GIRHGPRPIDLDILFYGRFSI-HSDTL-TVPHERIWERPFVVAPLLD 171 (480)
Q Consensus 95 F~N~v~~~~T~l~p~~Ll~~lk~IE~~~GR~r-~~~~~~r~iDiDIl~~~~~~~-~~~~l-~iPHp~~~~R~fVl~pl~e 171 (480)
-....+..+..-+.+++-+.+..||. .|-.- ..+-..|++ |=..|++.. +...+ .+ |...+--.|..|+.-
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~g~~~~~---ig~~g~~~~~~~~~~~~~--~~v~~~~~i~~~~k~ 83 (350)
T 1vr6_A 10 HHHMIVVLKPGSTEEDIRKVVKLAES-YNLKCHISKGQERTV---IGIIGDDRYVVADKFESL--DCVESVVRVLKPYKL 83 (350)
T ss_dssp EEEEEEEECTTCCHHHHHHHHHHHHH-TTEEEEEEECSSCEE---EEEEEEESSCCHHHHHTS--TTEEEEEECSCSCCT
T ss_pred cceEEEEECCCCCHHHHHHHHHHHHh-CCCeEEEEecCceEE---EEEECCcCcCCHHHhhCC--ccceeeccCCCChhh
Confidence 34567788888899999999999987 44322 223334555 444454331 00000 00 111111122222221
Q ss_pred hhCCCccccccccCCccccccCccccccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEE
Q 038230 172 LLGSSVESDTKLGGESLIGKEGMKRVLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMI 251 (480)
Q Consensus 172 l~~~~~~p~~~~~~~~~~q~~~i~r~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiI 251 (480)
...++ || -...+.+++..++.+ ++.|++-.-+ .-|.+.+++.|++..+.||+++
T Consensus 84 ~sr~~-~~--------------~~~~i~i~~~~iG~~-~~~vIAgpcs----------~es~e~a~~~a~~~k~aGa~~v 137 (350)
T 1vr6_A 84 VSREF-HP--------------EDTVIDLGDVKIGNG-YFTIIAGPCS----------VEGREMLMETAHFLSELGVKVL 137 (350)
T ss_dssp TBTTT-CC--------------SCCCEECSSCEESTT-EEEEEEECSB----------CCCHHHHHHHHHHHHHTTCCEE
T ss_pred hhhhc-CC--------------cCCEEEECCEEECCC-CeEEEEeCCC----------cCCHHHHHHHHHHHHHcCCCee
Confidence 11111 21 122345566666554 5666553321 4588999999999999999999
Q ss_pred EeCCCCCCC---CCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCC-CCchHHH
Q 038230 252 DIGAQSTRP---MATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQ-LDPDMYK 327 (480)
Q Consensus 252 DIG~eStrP---~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~-~d~~m~~ 327 (480)
=.+....|. +..... ++.++.+.. ..++ .++|+.-+-++++.++...+. ++++- |.+.+ ....++.
T Consensus 138 r~q~fKprTs~~~f~glg-~egl~~l~~---~~~e----~Gl~~~te~~d~~~~~~l~~~-vd~lk-IgAr~~~n~~LL~ 207 (350)
T 1vr6_A 138 RGGAYKPRTSPYSFQGLG-EKGLEYLRE---AADK----YGMYVVTEALGEDDLPKVAEY-ADIIQ-IGARNAQNFRLLS 207 (350)
T ss_dssp ECBSCCCCCSTTSCCCCT-HHHHHHHHH---HHHH----HTCEEEEECSSGGGHHHHHHH-CSEEE-ECGGGTTCHHHHH
T ss_pred eeeEEeCCCChHhhcCCC-HHHHHHHHH---HHHH----cCCcEEEEeCCHHHHHHHHHh-CCEEE-ECcccccCHHHHH
Confidence 888765443 112222 444544433 2333 389999999999999999888 88886 44433 2356888
Q ss_pred HHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEe-cCC-CC-cc-ChhHHHHHH
Q 038230 328 VVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIID-PGL-GF-SK-KAEHNLDIL 403 (480)
Q Consensus 328 l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilD-Pgi-Gf-~k-~~~~~~~~l 403 (480)
-+++.+.||++-- |.-.|+ +.+...++.+.+.|-+ +++|= =|+ .| .. ...-|+..+
T Consensus 208 ~va~~~kPVilk~--G~~~tl----------------~ei~~Ave~i~~~GN~--~viLceRG~~typ~~~~~~vdl~ai 267 (350)
T 1vr6_A 208 KAGSYNKPVLLKR--GFMNTI----------------EEFLLSAEYIANSGNT--KIILCERGIRTFEKATRNTLDISAV 267 (350)
T ss_dssp HHHTTCSCEEEEC--CTTCCH----------------HHHHHHHHHHHHTTCC--CEEEEECCBCCSCCSSSSBCCTTHH
T ss_pred HHHccCCcEEEcC--CCCCCH----------------HHHHHHHHHHHHCCCC--eEEEEeCCCCCCCCcChhhhhHHHH
Confidence 8889999999843 332221 3345667777888986 78881 233 34 22 112233333
Q ss_pred Hhc-ccCCCcEEEeeccccccccccCCCCcCcccHHHHHHHHHHHHcCCc--EEEcC
Q 038230 404 LGL-AASHAPILIGPSRKRFLGEICNRPSADERDPATIASITAGVLGGAN--IVRVH 457 (480)
Q Consensus 404 r~l-~~~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~--IlRvH 457 (480)
..+ +.+++|+++ -|- +-.| .|.....+ +..|+..||+ ++-+|
T Consensus 268 ~~lk~~~~lpVi~-dss-----Hs~G-----~~~~v~~~-a~AAvA~GA~Gl~IE~H 312 (350)
T 1vr6_A 268 PIIRKESHLPILV-DPS-----HSGG-----RRDLVIPL-SRAAIAVGAHGIIVEVH 312 (350)
T ss_dssp HHHHHHBSSCEEE-CHH-----HHHC-----SGGGHHHH-HHHHHHHTCSEEEEEBC
T ss_pred HHHHHhhCCCEEE-eCC-----CCCc-----ccchHHHH-HHHHHHhCCCEEEEEec
Confidence 333 235899653 221 1112 22222221 2234557999 99999
No 37
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=97.32 E-value=0.0021 Score=65.15 Aligned_cols=202 Identities=16% Similarity=0.116 Sum_probs=121.0
Q ss_pred EEecCC-CCCCCCCccCCHHHHHHHHH-HHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE
Q 038230 216 ILNLTP-DSFSDGGKFQSVEAAVSQVR-LMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS 293 (480)
Q Consensus 216 IlN~tp-DSFsdgg~~~~~e~a~~~A~-~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS 293 (480)
|+-.|| |-..--+..++.++.++.++ .+.+.|.+.|++|...+.| ++|+++..+.+.........+..++
T Consensus 22 I~DtTlRDG~Q~~~~~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~i~ 93 (337)
T 3ble_A 22 ILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDRVEIASARVSK--------GELETVQKIMEWAATEQLTERIEIL 93 (337)
T ss_dssp EEECHHHHHTTSTTCCCCHHHHHHHHHHHHHTTCCSEEEEEETTSCT--------THHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred EEECCCCCCCCCCCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCCCCh--------hHHHHHHHHHhhhhhhccCCCCeEE
Confidence 566665 55544455689999999999 9999999999999754433 4566665444421110001356788
Q ss_pred EeCCCHHHHHHHHHcCCCEEecCCCCCC-----------------CchHHHHHHhcCCCEEEEcCCCCCCccccccccch
Q 038230 294 VDTFYSKVASEAVGKGAHIVNDVSAGQL-----------------DPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQY 356 (480)
Q Consensus 294 IDT~~~~v~~aaL~~G~~iINdVsg~~~-----------------d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~ 356 (480)
..+...+-++.|+++|++.|.=...... -.++++.++++|..+.+..+. -|.. .+
T Consensus 94 ~l~~~~~~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~-~~~~--~~----- 165 (337)
T 3ble_A 94 GFVDGNKTVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED-WSNG--FR----- 165 (337)
T ss_dssp EESSTTHHHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET-HHHH--HH-----
T ss_pred EEccchhhHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE-CCCC--Cc-----
Confidence 8888877999999999998763322110 023567778888877653221 0000 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHCCCCCCCE-EEecCCCCccChhHHHHHHHhc-c-cCCCcEEEeeccccccccccCCCCcC
Q 038230 357 DDVCKQVASELYSKVRDAELSGIPAWRI-IIDPGLGFSKKAEHNLDILLGL-A-ASHAPILIGPSRKRFLGEICNRPSAD 433 (480)
Q Consensus 357 ~~v~~ev~~~l~~~i~~a~~~Gi~~~~I-ilDPgiGf~k~~~~~~~~lr~l-~-~~g~Pil~G~SrKsfi~~v~g~~~~~ 433 (480)
.+ .+++.+.++.+.++|.. .| +-|- +|.. ++.+..++++.+ + .++.|+=+ +. - .
T Consensus 166 ~~-----~~~~~~~~~~~~~~Ga~--~i~l~DT-~G~~-~P~~v~~lv~~l~~~~p~~~i~~-H~----------H---n 222 (337)
T 3ble_A 166 NS-----PDYVKSLVEHLSKEHIE--RIFLPDT-LGVL-SPEETFQGVDSLIQKYPDIHFEF-HG----------H---N 222 (337)
T ss_dssp HC-----HHHHHHHHHHHHTSCCS--EEEEECT-TCCC-CHHHHHHHHHHHHHHCTTSCEEE-EC----------B---C
T ss_pred CC-----HHHHHHHHHHHHHcCCC--EEEEecC-CCCc-CHHHHHHHHHHHHHhcCCCeEEE-Ee----------c---C
Confidence 00 25677888899999986 55 4465 3433 344555666666 2 23566532 11 0 1
Q ss_pred cccHHHHHHHHHHHHcCCcEEEcC
Q 038230 434 ERDPATIASITAGVLGGANIVRVH 457 (480)
Q Consensus 434 ~r~~~t~a~~~~a~~~Ga~IlRvH 457 (480)
++ +...|-+..|++.||+++.+.
T Consensus 223 d~-GlA~AN~laAv~aGa~~vd~t 245 (337)
T 3ble_A 223 DY-DLSVANSLQAIRAGVKGLHAS 245 (337)
T ss_dssp TT-SCHHHHHHHHHHTTCSEEEEB
T ss_pred Cc-chHHHHHHHHHHhCCCEEEEe
Confidence 12 223334556777888887653
No 38
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.17 E-value=0.00069 Score=63.28 Aligned_cols=148 Identities=17% Similarity=0.207 Sum_probs=93.5
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHH-HHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKV-ASEA 305 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v-~~aa 305 (480)
+.+.+++++.++++. .|+|+|.+|. |++ +..=.++|+.+++.. ++.||-+|. ..++. ++++
T Consensus 9 ~~~~~~~~~~~~~~~-~~~diie~G~----p~~--------~~~g~~~i~~ir~~~--~~~~i~~~~~~~~~~~~~~~~~ 73 (211)
T 3f4w_A 9 ELTLPEAMVFMDKVV-DDVDIIEVGT----PFL--------IREGVNAIKAIKEKY--PHKEVLADAKIMDGGHFESQLL 73 (211)
T ss_dssp SCCHHHHHHHHHHHG-GGCSEEEECH----HHH--------HHHTTHHHHHHHHHC--TTSEEEEEEEECSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHhh-cCccEEEeCc----HHH--------HhccHHHHHHHHHhC--CCCEEEEEEEeccchHHHHHHH
Confidence 457899999999985 8999999995 221 111124567777642 378887774 33555 8999
Q ss_pred HHcCCCEEecCCCCC-CC-chHHHHHHhcCCCEEE-EcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCC
Q 038230 306 VGKGAHIVNDVSAGQ-LD-PDMYKVVAGLKVPYVA-MHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAW 382 (480)
Q Consensus 306 L~~G~~iINdVsg~~-~d-~~m~~l~~~~~~~vVl-mh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~ 382 (480)
.++|++.|.-..... .+ .++.+.++++|..+++ +.. |.+ ..+.++.+.+.|.+
T Consensus 74 ~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~---~~t-------------------~~~~~~~~~~~g~d-- 129 (211)
T 3f4w_A 74 FDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMIC---VDD-------------------LPARVRLLEEAGAD-- 129 (211)
T ss_dssp HHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTT---CSS-------------------HHHHHHHHHHHTCC--
T ss_pred HhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecC---CCC-------------------HHHHHHHHHHcCCC--
Confidence 999999887443221 11 5678888999988876 222 211 12455666778887
Q ss_pred CEEEecCCCCccChhHHHHHHHhcc-c-CCCcEEEe
Q 038230 383 RIIIDPGLGFSKKAEHNLDILLGLA-A-SHAPILIG 416 (480)
Q Consensus 383 ~IilDPgiGf~k~~~~~~~~lr~l~-~-~g~Pil~G 416 (480)
-|.++||++-.+.....++.+++++ . .++|+.++
T Consensus 130 ~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~ 165 (211)
T 3f4w_A 130 MLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVA 165 (211)
T ss_dssp EEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEE
T ss_pred EEEEcCCCcccccCCCCHHHHHHHHHHcCCCcEEEE
Confidence 5899987531111111345566652 3 47888765
No 39
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=97.15 E-value=0.064 Score=52.35 Aligned_cols=205 Identities=20% Similarity=0.262 Sum_probs=124.7
Q ss_pred cccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCC--C-CCCCCCHHHHHHH
Q 038230 197 VLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTR--P-MATKISAEKELER 273 (480)
Q Consensus 197 ~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStr--P-~a~~v~~~eE~~r 273 (480)
.+.+++..++.+ +.|+.-.|..- |.+.|++.|+++.+.||+++=.+.-..| | +.... .++.++.
T Consensus 12 ~i~i~~~~iG~~--~~vIAgpc~~~----------~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~-~~egl~~ 78 (262)
T 1zco_A 12 VVKINDVKFGEG--FTIIAGPCSIE----------SREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGY-GEKALRW 78 (262)
T ss_dssp CEEETTEEETSS--CEEEEECSBCC----------CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCC-THHHHHH
T ss_pred eEEECCEEECCC--cEEEEeCCCCC----------CHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCc-cHHHHHH
Confidence 355666665554 55665446553 6899999999999999999988753222 1 11111 1444544
Q ss_pred HHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCC-CCchHHHHHHhcCCCEEEEcCCCCCCcccccc
Q 038230 274 LIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQ-LDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEE 352 (480)
Q Consensus 274 l~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~-~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~ 352 (480)
+..+ .++ .++|+.-|-++++.++.+.+. ++++- |.+.+ ....+++-+++.+.||++-. |.-.|+
T Consensus 79 l~~~---~~~----~Gl~~~te~~d~~~~~~l~~~-vd~~k-Iga~~~~n~~ll~~~a~~~kPV~lk~--G~~~t~---- 143 (262)
T 1zco_A 79 MREA---ADE----YGLVTVTEVMDTRHVELVAKY-SDILQ-IGARNSQNFELLKEVGKVENPVLLKR--GMGNTI---- 143 (262)
T ss_dssp HHHH---HHH----HTCEEEEECCCGGGHHHHHHH-CSEEE-ECGGGTTCHHHHHHHTTSSSCEEEEC--CTTCCH----
T ss_pred HHHH---HHH----cCCcEEEeeCCHHhHHHHHhh-CCEEE-ECcccccCHHHHHHHHhcCCcEEEec--CCCCCH----
Confidence 4332 333 389999999999999999888 88776 44433 23567888888999999832 332121
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEE-ecCC-CCcc-C-hh---HHHHHHHhcccCCCcEEEeecccccccc
Q 038230 353 NLQYDDVCKQVASELYSKVRDAELSGIPAWRIII-DPGL-GFSK-K-AE---HNLDILLGLAASHAPILIGPSRKRFLGE 425 (480)
Q Consensus 353 ~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DPgi-Gf~k-~-~~---~~~~~lr~l~~~g~Pil~G~SrKsfi~~ 425 (480)
+.....++.+...|.+ ++++ -=|+ .|.+ + .. ..+..+++ .+++|+++..|.
T Consensus 144 ------------~e~~~Av~~i~~~Gn~--~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~--~~~~pVi~d~sH------ 201 (262)
T 1zco_A 144 ------------QELLYSAEYIMAQGNE--NVILCERGIRTFETATRFTLDISAVPVVKE--LSHLPIIVDPSH------ 201 (262)
T ss_dssp ------------HHHHHHHHHHHTTTCC--CEEEEECCBCCSCCSSSSBCCTTHHHHHHH--HBSSCEEECSST------
T ss_pred ------------HHHHHHHHHHHHCCCC--eEEEEECCCCCCCCcChhhcCHHHHHHHHh--hhCCCEEEEcCC------
Confidence 2334566777888986 5555 4342 2211 1 11 23444443 358997654431
Q ss_pred ccCCCCcCcccHHHHHHHHHHHHcCCc--EEEcC
Q 038230 426 ICNRPSADERDPATIASITAGVLGGAN--IVRVH 457 (480)
Q Consensus 426 v~g~~~~~~r~~~t~a~~~~a~~~Ga~--IlRvH 457 (480)
-.|. |.....+ +..|+..||+ ++-+|
T Consensus 202 ~~g~-----~~~v~~~-~~aAva~Ga~Gl~iE~H 229 (262)
T 1zco_A 202 PAGR-----RSLVIPL-AKAAYAIGADGIMVEVH 229 (262)
T ss_dssp TTCS-----GGGHHHH-HHHHHHTTCSEEEEEBC
T ss_pred CCCc-----cchHHHH-HHHHHHcCCCEEEEEec
Confidence 1122 2222222 3347789999 99999
No 40
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.07 E-value=0.012 Score=56.92 Aligned_cols=158 Identities=11% Similarity=0.191 Sum_probs=91.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHH----------HHHHHHHHHHHHHHcCCcCCCCeEEEeC-CCHH
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAE----------KELERLIPVLEAVLTMPEMEGKLVSVDT-FYSK 300 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~----------eE~~rl~~vi~~l~~~~~~~~~pISIDT-~~~~ 300 (480)
+.+..++.++.+.+.|||+|.+|..-+.|-.+.--.. -..+.....++.+++. .++|+-+-+ +++.
T Consensus 30 ~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~---~~~Pv~~m~~~~~~ 106 (262)
T 1rd5_A 30 DLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE---LSCPVVLLSYYKPI 106 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG---CSSCEEEECCSHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc---CCCCEEEEecCcHH
Confidence 3578899999999999999999975544433210000 0134456677888875 478887754 3442
Q ss_pred ---HHHHHHHcCCCEEecCCCCC-CCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHH
Q 038230 301 ---VASEAVGKGAHIVNDVSAGQ-LDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAEL 376 (480)
Q Consensus 301 ---v~~aaL~~G~~iINdVsg~~-~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~ 376 (480)
.+++|.++|++.+--..... .-.+++..++++|..+++.-. |.+.. ++++.+.+
T Consensus 107 ~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a---~~t~~-------------------e~~~~~~~ 164 (262)
T 1rd5_A 107 MFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTT---PAIPE-------------------DRMKEITK 164 (262)
T ss_dssp HSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEEC---TTSCH-------------------HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEEC---CCCCH-------------------HHHHHHHh
Confidence 24558889999443222111 124678888999988765432 22211 11112112
Q ss_pred CCCCCCCEEEecCCCCc-c--C-hhHHHHHHHhc-ccCCCcEEEe
Q 038230 377 SGIPAWRIIIDPGLGFS-K--K-AEHNLDILLGL-AASHAPILIG 416 (480)
Q Consensus 377 ~Gi~~~~IilDPgiGf~-k--~-~~~~~~~lr~l-~~~g~Pil~G 416 (480)
.+- .-+++.+..|+. . . ....++.++++ +..++|+++|
T Consensus 165 ~~~--g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vg 207 (262)
T 1rd5_A 165 ASE--GFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVG 207 (262)
T ss_dssp HCC--SCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEE
T ss_pred cCC--CeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEE
Confidence 221 137777765542 1 1 13345667766 3468999986
No 41
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=97.06 E-value=0.012 Score=58.26 Aligned_cols=174 Identities=12% Similarity=0.086 Sum_probs=109.6
Q ss_pred EEecCC-CCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHcCCcCCCCeEE
Q 038230 216 ILNLTP-DSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISA-EKELERLIPVLEAVLTMPEMEGKLVS 293 (480)
Q Consensus 216 IlN~tp-DSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~-~eE~~rl~~vi~~l~~~~~~~~~pIS 293 (480)
|+-.|+ |-..--+..++.++.++.++.+.+.|.++|.+|...+ |. .++. +++++ +++.+++. .+++++
T Consensus 7 i~d~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~-~~--~~p~~~~~~e----~~~~i~~~---~~~~v~ 76 (295)
T 1ydn_A 7 IVEMAARDGLQNEKRFVPTADKIALINRLSDCGYARIEATSFVS-PK--WVPQLADSRE----VMAGIRRA---DGVRYS 76 (295)
T ss_dssp EEECTTTHHHHTSSSCCCHHHHHHHHHHHTTTTCSEEEEEECSC-TT--TCGGGTTHHH----HHHHSCCC---SSSEEE
T ss_pred EEECCCCccccCCCCCcCHHHHHHHHHHHHHcCcCEEEEccCcC-cc--ccccccCHHH----HHHHHHhC---CCCEEE
Confidence 555564 4333334458899999999999999999999996443 21 1211 13333 34555544 378887
Q ss_pred EeCCCHHHHHHHHHcCCCEEecCC-CC----------CCC------chHHHHHHhcCCCEE--EEcCCCCCCcccccccc
Q 038230 294 VDTFYSKVASEAVGKGAHIVNDVS-AG----------QLD------PDMYKVVAGLKVPYV--AMHMRGDPSTMQNEENL 354 (480)
Q Consensus 294 IDT~~~~v~~aaL~~G~~iINdVs-g~----------~~d------~~m~~l~~~~~~~vV--lmh~~g~p~~~~~~~~~ 354 (480)
+=+.+.+-++.|+++|++.|.=.. +. ..+ .++++.++++|..|. +++.-|-|... +.+
T Consensus 77 ~l~~n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~--~~~- 153 (295)
T 1ydn_A 77 VLVPNMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDG--PVT- 153 (295)
T ss_dssp EECSSHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTE--ECC-
T ss_pred EEeCCHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCC--CCC-
Confidence 777999999999999998665221 11 111 235788889999887 66654433211 111
Q ss_pred chhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhcc-cC-CCcEE
Q 038230 355 QYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGLA-AS-HAPIL 414 (480)
Q Consensus 355 ~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l~-~~-g~Pil 414 (480)
.+++.+.++.+.+.|++.-. +-|. .|. .++.+..++++.++ .. +.|+-
T Consensus 154 ---------~~~~~~~~~~~~~~G~d~i~-l~Dt-~G~-~~P~~~~~lv~~l~~~~~~~~l~ 203 (295)
T 1ydn_A 154 ---------PQAVASVTEQLFSLGCHEVS-LGDT-IGR-GTPDTVAAMLDAVLAIAPAHSLA 203 (295)
T ss_dssp ---------HHHHHHHHHHHHHHTCSEEE-EEET-TSC-CCHHHHHHHHHHHHTTSCGGGEE
T ss_pred ---------HHHHHHHHHHHHhcCCCEEE-ecCC-CCC-cCHHHHHHHHHHHHHhCCCCeEE
Confidence 15566777888889997322 3475 444 35667778888772 23 35653
No 42
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=97.05 E-value=0.023 Score=56.74 Aligned_cols=165 Identities=12% Similarity=0.109 Sum_probs=103.6
Q ss_pred EEecCC-CCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHcCCcCCCCeEE
Q 038230 216 ILNLTP-DSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATK-ISAEKELERLIPVLEAVLTMPEMEGKLVS 293 (480)
Q Consensus 216 IlN~tp-DSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~-v~~~eE~~rl~~vi~~l~~~~~~~~~pIS 293 (480)
|+-.|+ |-+.--+..++.++-++.++.+.+.|.++|++|.-+. |...+ ....+| +++.+.+. .++.++
T Consensus 9 i~DtTlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~-~~~~p~~~d~~~------~~~~~~~~---~~~~~~ 78 (307)
T 1ydo_A 9 IKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVH-PKWIPALRDAID------VAKGIDRE---KGVTYA 78 (307)
T ss_dssp EEECHHHHTGGGSSSCCCHHHHHHHHHHHHTTTCSEEEEEECSC-TTTCGGGTTHHH------HHHHSCCC---TTCEEE
T ss_pred EEECCCCCCcCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCcC-cccccccCCHHH------HHHHhhhc---CCCeEE
Confidence 445554 5444445668999999999999999999999996322 22111 111122 23445543 377787
Q ss_pred EeCCCHHHHHHHHHcCCCEEecCCCCCC---------C--------chHHHHHHhcCCCEE--EEcCCCCCCcccccccc
Q 038230 294 VDTFYSKVASEAVGKGAHIVNDVSAGQL---------D--------PDMYKVVAGLKVPYV--AMHMRGDPSTMQNEENL 354 (480)
Q Consensus 294 IDT~~~~v~~aaL~~G~~iINdVsg~~~---------d--------~~m~~l~~~~~~~vV--lmh~~g~p~~~~~~~~~ 354 (480)
.=+.+.+-++.|+++|++.|+=...... . .++++.++++|..+. ++..-|-|... +.+
T Consensus 79 ~l~~~~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~--~~~- 155 (307)
T 1ydo_A 79 ALVPNQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEK--DVP- 155 (307)
T ss_dssp EECCSHHHHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTB--CCC-
T ss_pred EEeCCHHhHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCC--CCC-
Confidence 7778999999999999998873322210 0 346788889998764 44444434211 111
Q ss_pred chhhHHHHHHHHHHHHHHHHHHCCCCCCCEE-EecCCCCccChhHHHHHHHhc
Q 038230 355 QYDDVCKQVASELYSKVRDAELSGIPAWRII-IDPGLGFSKKAEHNLDILLGL 406 (480)
Q Consensus 355 ~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Ii-lDPgiGf~k~~~~~~~~lr~l 406 (480)
.+++.+.++.+.++|.. .|. -|- +|.. ++.+..++++.+
T Consensus 156 ---------~~~~~~~~~~~~~~Ga~--~i~l~DT-~G~~-~P~~v~~lv~~l 195 (307)
T 1ydo_A 156 ---------IEQVIRLSEALFEFGIS--ELSLGDT-IGAA-NPAQVETVLEAL 195 (307)
T ss_dssp ---------HHHHHHHHHHHHHHTCS--CEEEECS-SCCC-CHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHhcCCC--EEEEcCC-CCCc-CHHHHHHHHHHH
Confidence 15667788888899986 453 454 4433 355556677766
No 43
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=97.00 E-value=0.17 Score=49.71 Aligned_cols=209 Identities=19% Similarity=0.209 Sum_probs=128.6
Q ss_pred cccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCC---CCCCCHHHHHHH
Q 038230 197 VLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPM---ATKISAEKELER 273 (480)
Q Consensus 197 ~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~---a~~v~~~eE~~r 273 (480)
.+.+++..++.+ ++.|+.-.. ...|.+.+++.|++..+.||+++=.+....|.. .... .++.++.
T Consensus 26 ~i~i~~~~iG~~-~~~vIAgpc----------~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~-g~~gl~~ 93 (276)
T 1vs1_A 26 VVEVEGVRIGGG-SKAVIAGPC----------SVESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGL-GLEGLKL 93 (276)
T ss_dssp CEEETTEEEBTT-BCEEEEECS----------BCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCC-THHHHHH
T ss_pred EEEECCEEECCC-CeEEEEecC----------CCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCC-CHHHHHH
Confidence 355666666554 566665333 124789999999999999999988886554431 1121 2445554
Q ss_pred HHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCC-CCchHHHHHHhcCCCEEEEcCCCCCCcccccc
Q 038230 274 LIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQ-LDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEE 352 (480)
Q Consensus 274 l~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~-~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~ 352 (480)
+..+ .++. ++|+.-+-++++.++...+. ++++- |.+.+ .+..+++.+++.+.||++-. |+-.|+
T Consensus 94 l~~~---~~~~----Gl~~~te~~d~~~~~~l~~~-vd~~k-Igs~~~~n~~ll~~~a~~~kPV~lk~--G~~~t~---- 158 (276)
T 1vs1_A 94 LRRA---GDEA----GLPVVTEVLDPRHVETVSRY-ADMLQ-IGARNMQNFPLLREVGRSGKPVLLKR--GFGNTV---- 158 (276)
T ss_dssp HHHH---HHHH----TCCEEEECCCGGGHHHHHHH-CSEEE-ECGGGTTCHHHHHHHHHHTCCEEEEC--CTTCCH----
T ss_pred HHHH---HHHc----CCcEEEecCCHHHHHHHHHh-CCeEE-ECcccccCHHHHHHHHccCCeEEEcC--CCCCCH----
Confidence 4333 3333 89999999999999999888 88886 44433 34668999999999999843 322121
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEec-CC-CC-c-cChhHHHHHHHhcc-cCCCcEEEeecccccccccc
Q 038230 353 NLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDP-GL-GF-S-KKAEHNLDILLGLA-ASHAPILIGPSRKRFLGEIC 427 (480)
Q Consensus 353 ~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDP-gi-Gf-~-k~~~~~~~~lr~l~-~~g~Pil~G~SrKsfi~~v~ 427 (480)
+.....++.+...|-+ +|+|== |+ .| . ....-|+..+..++ .+++|++ |-|--+ .
T Consensus 159 ------------~ei~~Ave~i~~~Gn~--~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi-~dssH~-----~ 218 (276)
T 1vs1_A 159 ------------EELLAAAEYILLEGNW--QVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVI-VDPSHP-----A 218 (276)
T ss_dssp ------------HHHHHHHHHHHHTTCC--CEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEE-ECCHHH-----H
T ss_pred ------------HHHHHHHHHHHHcCCC--eEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEE-EeCCCC-----C
Confidence 3345667777888986 666643 65 45 2 22223344444442 3589964 333111 1
Q ss_pred CCCCcCcccHHHHHHHHHHHHcCCc--EEEcCC
Q 038230 428 NRPSADERDPATIASITAGVLGGAN--IVRVHN 458 (480)
Q Consensus 428 g~~~~~~r~~~t~a~~~~a~~~Ga~--IlRvHd 458 (480)
| .|.....+ +..|+..||+ +|-+|-
T Consensus 219 g-----~~~~~~~~-~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 219 G-----RRSLVPAL-AKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp C-----SGGGHHHH-HHHHHHTTCSEEEEEBCS
T ss_pred C-----ccchHHHH-HHHHHHcCCCEEEEEecC
Confidence 2 23222222 2334668999 999993
No 44
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=96.92 E-value=0.019 Score=58.08 Aligned_cols=189 Identities=15% Similarity=0.093 Sum_probs=110.8
Q ss_pred CccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCC---CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe-CC---CHH
Q 038230 228 GKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMAT---KISAEKELERLIPVLEAVLTMPEMEGKLVSVD-TF---YSK 300 (480)
Q Consensus 228 g~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~---~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID-T~---~~~ 300 (480)
+..++.++-++.++.+.+.|+++|.+|-....|++. ....+.+++++ +.+++.. .+++++.= .. ..+
T Consensus 24 ~~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l----~~i~~~~--~~~~i~~l~~p~~~~~~ 97 (345)
T 1nvm_A 24 RHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYI----EAVAGEI--SHAQIATLLLPGIGSVH 97 (345)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHH----HHHHTTC--SSSEEEEEECBTTBCHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHH----HHHHhhC--CCCEEEEEecCCcccHH
Confidence 345789999999999999999999998222222221 11122345544 3344432 36676654 22 578
Q ss_pred HHHHHHHcCCCEEecCCCCC---CCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHC
Q 038230 301 VASEAVGKGAHIVNDVSAGQ---LDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELS 377 (480)
Q Consensus 301 v~~aaL~~G~~iINdVsg~~---~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~ 377 (480)
-+++|.++|++.+.=....+ .-.+..+.++++|..++...+.. +.+. .+++.+.++.+.++
T Consensus 98 ~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a-~~~~---------------~e~~~~ia~~~~~~ 161 (345)
T 1nvm_A 98 DLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMS-HMIP---------------AEKLAEQGKLMESY 161 (345)
T ss_dssp HHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEEST-TSSC---------------HHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeC-CCCC---------------HHHHHHHHHHHHHC
Confidence 89999999988654222221 12567888899998887654321 2110 15667788888888
Q ss_pred CCCCCCEE-EecCCCCccChhHHHHHHHhc-ccC--CCcEEEeeccccccccccCCCCcCcccHHHHHHHHHHHHcCCcE
Q 038230 378 GIPAWRII-IDPGLGFSKKAEHNLDILLGL-AAS--HAPILIGPSRKRFLGEICNRPSADERDPATIASITAGVLGGANI 453 (480)
Q Consensus 378 Gi~~~~Ii-lDPgiGf~k~~~~~~~~lr~l-~~~--g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~I 453 (480)
|+. .|. -|- .|... +.+..++++.+ +.. +.|+-+ |. - .++ +...|-+..|++.||++
T Consensus 162 Ga~--~i~l~DT-~G~~~-P~~v~~lv~~l~~~~~~~~pi~~-H~----------H---n~~-G~avAn~laA~~aGa~~ 222 (345)
T 1nvm_A 162 GAT--CIYMADS-GGAMS-MNDIRDRMRAFKAVLKPETQVGM-HA----------H---HNL-SLGVANSIVAVEEGCDR 222 (345)
T ss_dssp TCS--EEEEECT-TCCCC-HHHHHHHHHHHHHHSCTTSEEEE-EC----------B---CTT-SCHHHHHHHHHHTTCCE
T ss_pred CCC--EEEECCC-cCccC-HHHHHHHHHHHHHhcCCCceEEE-EE----------C---CCc-cHHHHHHHHHHHcCCCE
Confidence 986 332 232 34443 55556667766 233 677654 11 0 112 22333345677778877
Q ss_pred EEcC
Q 038230 454 VRVH 457 (480)
Q Consensus 454 lRvH 457 (480)
+.+.
T Consensus 223 vd~t 226 (345)
T 1nvm_A 223 VDAS 226 (345)
T ss_dssp EEEB
T ss_pred EEec
Confidence 7653
No 45
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=96.87 E-value=0.01 Score=58.28 Aligned_cols=101 Identities=18% Similarity=0.311 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHH--------------HHHHHHHHHHHcCCcCCCCeEEEeC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKEL--------------ERLIPVLEAVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~--------------~rl~~vi~~l~~~~~~~~~pISIDT 296 (480)
-+.+..++.++.+.+. ||+|.||..-+.|-++ ...+ +.+...++.+++. .++||-+=+
T Consensus 27 P~~~~~~~~~~~l~~~-aD~IElG~PfsdP~ad----Gp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~---~~~Pii~m~ 98 (271)
T 1ujp_A 27 PSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGD----GPVIQRASELALRKGMSVQGALELVREVRAL---TEKPLFLMT 98 (271)
T ss_dssp SCHHHHHHHHHHHGGG-CSSEEEECCCCC--------CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH---CCSCEEEEC
T ss_pred CChHHHHHHHHHHHhc-CCEEEECCCCCCcccc----cHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc---CCCCEEEEe
Confidence 3667888888999888 9999999865555332 1222 3455677788765 478877755
Q ss_pred CCH--------HHHHHHHHcCCC--EEecCCCCCCCchHHHHHHhcCCCEEEEc
Q 038230 297 FYS--------KVASEAVGKGAH--IVNDVSAGQLDPDMYKVVAGLKVPYVAMH 340 (480)
Q Consensus 297 ~~~--------~v~~aaL~~G~~--iINdVsg~~~d~~m~~l~~~~~~~vVlmh 340 (480)
|.. +-+++|.++|++ ++.|+.-++ ..++.+.++++|..+|.+-
T Consensus 99 y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee-~~~~~~~~~~~gl~~i~li 151 (271)
T 1ujp_A 99 YLNPVLAWGPERFFGLFKQAGATGVILPDLPPDE-DPGLVRLAQEIGLETVFLL 151 (271)
T ss_dssp CHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGG-CHHHHHHHHHHTCEEECEE
T ss_pred cCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHH-HHHHHHHHHHcCCceEEEe
Confidence 433 345667778998 455555322 4678999999998877443
No 46
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=96.79 E-value=0.022 Score=55.47 Aligned_cols=159 Identities=16% Similarity=0.273 Sum_probs=100.1
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHH-------HHHHHHHHHcCCcCCCCeEEEeCCCHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELER-------LIPVLEAVLTMPEMEGKLVSVDTFYSKVA 302 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~r-------l~~vi~~l~~~~~~~~~pISIDT~~~~v~ 302 (480)
+-+.+.-++.++.|.++|||+|.+|...+-|-++.-.-++--.| +..+++.+++.. ..+|+.+=||..-+.
T Consensus 24 ~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r--~~~Pivlm~Y~N~i~ 101 (252)
T 3tha_A 24 YPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIK--TKKALVFMVYYNLIF 101 (252)
T ss_dssp SSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCC--CSSEEEEECCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHh--cCCCEEEEeccCHHH
Confidence 45889999999999999999999999888887664333322211 233444444431 247999988866554
Q ss_pred H--------HHHHcCCC--EEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHH
Q 038230 303 S--------EAVGKGAH--IVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVR 372 (480)
Q Consensus 303 ~--------aaL~~G~~--iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~ 372 (480)
. .|.++|++ ||.|+--++ .+++.+.+++||..+|.+-. |.|. .++++
T Consensus 102 ~~G~e~F~~~~~~aGvdG~IipDLP~eE-~~~~~~~~~~~Gl~~I~lva---P~t~-------------------~eRi~ 158 (252)
T 3tha_A 102 SYGLEKFVKKAKSLGICALIVPELSFEE-SDDLIKECERYNIALITLVS---VTTP-------------------KERVK 158 (252)
T ss_dssp HHCHHHHHHHHHHTTEEEEECTTCCGGG-CHHHHHHHHHTTCEECEEEE---TTSC-------------------HHHHH
T ss_pred HhhHHHHHHHHHHcCCCEEEeCCCCHHH-HHHHHHHHHHcCCeEEEEeC---CCCc-------------------HHHHH
Confidence 4 44556877 788886543 57899999999998886553 2221 13333
Q ss_pred HHHHC--CCCCCCEEEecCCCC-ccCh---hHHHHHHHhcc-cCCCcEEEee
Q 038230 373 DAELS--GIPAWRIIIDPGLGF-SKKA---EHNLDILLGLA-ASHAPILIGP 417 (480)
Q Consensus 373 ~a~~~--Gi~~~~IilDPgiGf-~k~~---~~~~~~lr~l~-~~g~Pil~G~ 417 (480)
+..+. |+ |+.=...|. |... ..-.+++++++ ..+.|+++|.
T Consensus 159 ~ia~~a~gF----iY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGf 206 (252)
T 3tha_A 159 KLVKHAKGF----IYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGF 206 (252)
T ss_dssp HHHTTCCSC----EEEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEES
T ss_pred HHHHhCCCe----EEEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEc
Confidence 33333 44 666554443 2221 12245566663 4689999985
No 47
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=96.56 E-value=0.55 Score=48.32 Aligned_cols=243 Identities=15% Similarity=0.193 Sum_probs=146.0
Q ss_pred ccccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHH
Q 038230 196 RVLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLI 275 (480)
Q Consensus 196 r~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~ 275 (480)
+...+|+..++.+.++.|=--.| |+ -.|.+.-+++++++.++|++++=|-. | .+++.+-+.
T Consensus 9 r~V~VG~v~IGG~~PI~VQSMtn-T~--------T~Dv~aTv~QI~~L~~aG~eiVRvaV----p------~~~~A~al~ 69 (406)
T 4g9p_A 9 PTVYVGRVPIGGAHPIAVQSMTN-TP--------TRDVEATTAQVLELHRAGSEIVRLTV----N------DEEAAKAVP 69 (406)
T ss_dssp CCEEETTEEESTTSCCEEEEECC-SC--------TTCHHHHHHHHHHHHHHTCSEEEEEC----C------SHHHHHHHH
T ss_pred eeEEEcCEeeCCCCceeeeecCC-CC--------cccHHHHHHHHHHHHHcCCCEEEEec----C------CHHHHHhHH
Confidence 34567788887766655544444 33 47899999999999999999999854 2 245666666
Q ss_pred HHHHHHHcCCcCCCCeEEEeC-CCHHHHHHHH---HcCCCEEecCCCCCCC---------chHHHHHHhcCCCEEEEcCC
Q 038230 276 PVLEAVLTMPEMEGKLVSVDT-FYSKVASEAV---GKGAHIVNDVSAGQLD---------PDMYKVVAGLKVPYVAMHMR 342 (480)
Q Consensus 276 ~vi~~l~~~~~~~~~pISIDT-~~~~v~~aaL---~~G~~iINdVsg~~~d---------~~m~~l~~~~~~~vVlmh~~ 342 (480)
.+.+.+.... .++||.-|- |++..+.++. +.|.+-+- |+.++.- .++++.|+++++++=+=-+.
T Consensus 70 ~I~~~l~~~~--~~vPLVADiHF~~~~al~a~~~~a~~~dkiR-INPGNig~~~k~~e~~~~vv~~ak~~~~pIRIGVN~ 146 (406)
T 4g9p_A 70 EIKRRLLAEG--VEVPLVGDFHFNGHLLLRKYPKMAEALDKFR-INPGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGANW 146 (406)
T ss_dssp HHHHHHHHTT--CCCCEEEECCSSHHHHHHHCHHHHHHCSEEE-ECTTSSCSTHHHHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred HHHHHHHhcC--CCCceEeeecccHHHHHHHHHHHHhHHhhcc-cCccccCccccHHHHHHHHHHHHHHccCCceecccc
Confidence 6666665542 489998885 6777776543 33555432 3333321 25889999999998764433
Q ss_pred CC-CCccc-cc-------cc-cchhh-HHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc-ccCC
Q 038230 343 GD-PSTMQ-NE-------EN-LQYDD-VCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL-AASH 410 (480)
Q Consensus 343 g~-p~~~~-~~-------~~-~~~~~-v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l-~~~g 410 (480)
|. .+..- +. +. ..+.. ..+.+.+...+.++.+++.|+..++|++=- =+.+....++..|.| +..+
T Consensus 147 GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~~~iviS~---KaSdv~~~i~aYr~la~~~d 223 (406)
T 4g9p_A 147 GSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSA---KVSKARDLVWVYRELARRTQ 223 (406)
T ss_dssp GGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEE---ECSSHHHHHHHHHHHHHHCC
T ss_pred ccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCChhheEEEe---ecCCHHHHHHHHHHHHHhCC
Confidence 32 21110 00 00 01112 223456667777888999999888998843 122334444555555 4579
Q ss_pred CcEEEeeccccccccccCCCCcCcccHHHHHHHHHHHHcC-CcEEEcC---C-----hHHHHHHHHHHHHH
Q 038230 411 APILIGPSRKRFLGEICNRPSADERDPATIASITAGVLGG-ANIVRVH---N-----IRDNLDAVKLCDSM 472 (480)
Q Consensus 411 ~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~G-a~IlRvH---d-----V~e~~~al~~~~ai 472 (480)
||+-+|+. +.-...+-..-+++....++..| .|-|||- | ++|.+-+..+.+++
T Consensus 224 yPLHLGvT---------EAG~~~~G~IKSaigiG~LL~~GIGDTIRVSLT~dP~e~~~~EV~va~~ILqsl 285 (406)
T 4g9p_A 224 APLHLGLT---------EAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPSPKEPRTKEVEVAQEILQAL 285 (406)
T ss_dssp SCBEECCT---------TCBSHHHHHHHHHHHHHHHHHTTCCSEEECCBCCCTTSCTTHHHHHHHHHHHHT
T ss_pred CCceeeee---------cCCCcccceechHHHHHHHHhccCchhEEeeccCCCCcccHHHHHHHHHHHHHh
Confidence 99999974 32111111122344445566677 7999993 3 23666555555554
No 48
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=96.49 E-value=0.02 Score=53.03 Aligned_cols=90 Identities=24% Similarity=0.356 Sum_probs=67.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC-CCHHHHHHHHHcC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT-FYSKVASEAVGKG 309 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT-~~~~v~~aaL~~G 309 (480)
.+.+++.+.++.+.+.|+++|.+.... |+ ..+ .++.+++... .+.+|.++| .+++.+++|+++|
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~--~~-----~~~-------~i~~ir~~~~-~~~~ig~~~v~~~~~~~~a~~~G 83 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTV--PD-----ADT-------VIKELSFLKE-KGAIIGAGTVTSVEQCRKAVESG 83 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTS--TT-----HHH-------HHHHTHHHHH-TTCEEEEESCCSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC--hh-----HHH-------HHHHHHHHCC-CCcEEEecccCCHHHHHHHHHcC
Confidence 357889999999999999999997642 32 111 2333443211 157899977 7899999999999
Q ss_pred CCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 310 AHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 310 ~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+|+| ++... .+++++.++++|.+++.
T Consensus 84 ad~i--v~~~~-~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 84 AEFI--VSPHL-DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp CSEE--ECSSC-CHHHHHHHHHHTCEEEC
T ss_pred CCEE--EcCCC-CHHHHHHHHHcCCcEEC
Confidence 9999 66543 68899999999999874
No 49
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=96.39 E-value=0.0094 Score=57.45 Aligned_cols=80 Identities=16% Similarity=0.188 Sum_probs=58.4
Q ss_pred HHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCC--EEecCC
Q 038230 240 VRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAH--IVNDVS 317 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~--iINdVs 317 (480)
++.+.++|||+|.||+ | ..++ .+.+..+++.+++. ++|+-+=+|+++.+ .+|+| +|.|+-
T Consensus 26 ~~~l~~~GaD~IelG~-S-----~g~t----~~~~~~~v~~ir~~----~~Pivl~~y~~n~i----~~gvDg~iipdLp 87 (234)
T 2f6u_A 26 IKAVADSGTDAVMISG-T-----QNVT----YEKARTLIEKVSQY----GLPIVVEPSDPSNV----VYDVDYLFVPTVL 87 (234)
T ss_dssp HHHHHTTTCSEEEECC-C-----TTCC----HHHHHHHHHHHTTS----CCCEEECCSSCCCC----CCCSSEEEEEEET
T ss_pred HHHHHHcCCCEEEECC-C-----CCCC----HHHHHHHHHHhcCC----CCCEEEecCCcchh----hcCCCEEEEcccC
Confidence 5788999999999998 3 2333 45666778888762 89999999995333 56877 888887
Q ss_pred CCCCCchHH-----HHH-------HhcC-----CCEEE
Q 038230 318 AGQLDPDMY-----KVV-------AGLK-----VPYVA 338 (480)
Q Consensus 318 g~~~d~~m~-----~l~-------~~~~-----~~vVl 338 (480)
.++ +++.. +.+ ++|| ..+|.
T Consensus 88 ~ee-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~ 124 (234)
T 2f6u_A 88 NSA-DGDWITGKHAQWVRMHYENLQKFTEIIESEFIQI 124 (234)
T ss_dssp TBS-BGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEE
T ss_pred CCC-CHHHHhhhHHHHHHhhhhhHHHcCCcccceeeee
Confidence 654 56666 555 7788 66665
No 50
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.36 E-value=0.055 Score=49.98 Aligned_cols=96 Identities=24% Similarity=0.221 Sum_probs=60.6
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCC-HHH-HHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFY-SKV-ASEA 305 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~-~~v-~~aa 305 (480)
+.+.+++++.++++.+ |+++|+||..-.-+ .=..+|+.|++.. .+.|+-+| +++ ++. ++.|
T Consensus 9 ~~~~~~~~~~~~~~~~-~v~~iev~~~~~~~------------~g~~~i~~l~~~~--~~~~i~~~l~~~di~~~~~~~a 73 (207)
T 3ajx_A 9 LLSTEAALELAGKVAE-YVDIIELGTPLIKA------------EGLSVITAVKKAH--PDKIVFADMKTMDAGELEADIA 73 (207)
T ss_dssp CSCHHHHHHHHHHHGG-GCSEEEECHHHHHH------------HCTHHHHHHHHHS--TTSEEEEEEEECSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhc-cCCEEEECcHHHHh------------hCHHHHHHHHHhC--CCCeEEEEEEecCccHHHHHHH
Confidence 3578999999999877 99999998531000 0012466666542 25665543 345 555 8999
Q ss_pred HHcCCCEEe-cCCCCCC-CchHHHHHHhcCCCEEE-Ec
Q 038230 306 VGKGAHIVN-DVSAGQL-DPDMYKVVAGLKVPYVA-MH 340 (480)
Q Consensus 306 L~~G~~iIN-dVsg~~~-d~~m~~l~~~~~~~vVl-mh 340 (480)
+++|++.+. ....... -.+..+.++++|..+.+ ++
T Consensus 74 ~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~ 111 (207)
T 3ajx_A 74 FKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLI 111 (207)
T ss_dssp HHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred HhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEe
Confidence 999999997 2322110 13456777788888633 54
No 51
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=96.32 E-value=0.076 Score=52.62 Aligned_cols=194 Identities=15% Similarity=0.120 Sum_probs=106.4
Q ss_pred EEecCC-CCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE
Q 038230 216 ILNLTP-DSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV 294 (480)
Q Consensus 216 IlN~tp-DSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI 294 (480)
|+-.|| |-+---+..++.++-++.++.+.+.|.+.|++|. |.+ .+.+++++..+.+.+. +..++.
T Consensus 8 I~DttlRDG~Q~~~~~~~~~~K~~i~~~L~~~Gv~~IE~g~----p~~----~~~d~e~v~~i~~~~~------~~~i~~ 73 (293)
T 3ewb_X 8 FFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEAGF----PIS----SPGDFECVKAIAKAIK------HCSVTG 73 (293)
T ss_dssp EEECTTTCCC-----CCCHHHHHHHHHHHHHHTCSEEEEEC----GGG----CHHHHHHHHHHHHHCC------SSEEEE
T ss_pred EEECCCCCcCcCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC----CCC----CccHHHHHHHHHHhcC------CCEEEE
Confidence 555554 3333335568899999999999999999999995 322 2356666655544332 344433
Q ss_pred -eCCCHHHHHHHHH----cCCCEEecCCCC---------CCC--------chHHHHHHhcCCCEEEEcCCCCCCcccccc
Q 038230 295 -DTFYSKVASEAVG----KGAHIVNDVSAG---------QLD--------PDMYKVVAGLKVPYVAMHMRGDPSTMQNEE 352 (480)
Q Consensus 295 -DT~~~~v~~aaL~----~G~~iINdVsg~---------~~d--------~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~ 352 (480)
=-...+-++.|++ +|++.|+=..+. +.. .++++.+++++..|......+ + +.
T Consensus 74 l~~~~~~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~-~-----~~ 147 (293)
T 3ewb_X 74 LARCVEGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDA-T-----RS 147 (293)
T ss_dssp EEESSHHHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETG-G-----GS
T ss_pred EecCCHHHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccC-C-----CC
Confidence 2234556677777 487766522111 111 245667788888776543321 0 11
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEE-ecCCCCccChhHHHHHHHhc--ccCCCc-EEEeeccccccccccC
Q 038230 353 NLQYDDVCKQVASELYSKVRDAELSGIPAWRIII-DPGLGFSKKAEHNLDILLGL--AASHAP-ILIGPSRKRFLGEICN 428 (480)
Q Consensus 353 ~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DPgiGf~k~~~~~~~~lr~l--~~~g~P-il~G~SrKsfi~~v~g 428 (480)
+ .+++.+.++.+.++|.. .|.| |- +|.. ++.+-.++++.+ ..++.+ +-+|+= .
T Consensus 148 ~----------~~~~~~~~~~~~~~G~~--~i~l~DT-~G~~-~P~~v~~lv~~l~~~~~~~~~~~l~~H-------~-- 204 (293)
T 3ewb_X 148 D----------RAFLIEAVQTAIDAGAT--VINIPDT-VGYT-NPTEFGQLFQDLRREIKQFDDIIFASH-------C-- 204 (293)
T ss_dssp C----------HHHHHHHHHHHHHTTCC--EEEEECS-SSCC-CHHHHHHHHHHHHHHCTTGGGSEEEEE-------C--
T ss_pred C----------HHHHHHHHHHHHHcCCC--EEEecCC-CCCC-CHHHHHHHHHHHHHhcCCccCceEEEE-------e--
Confidence 1 15667888888999996 4443 53 3332 233444555555 233322 323321 0
Q ss_pred CCCcCcccHHHHHHHHHHHHcCCcEEEc
Q 038230 429 RPSADERDPATIASITAGVLGGANIVRV 456 (480)
Q Consensus 429 ~~~~~~r~~~t~a~~~~a~~~Ga~IlRv 456 (480)
- .++ +...|-+..|++.|++.+.+
T Consensus 205 H---nd~-Gla~AN~laA~~aGa~~vd~ 228 (293)
T 3ewb_X 205 H---DDL-GMATANALAAIENGARRVEG 228 (293)
T ss_dssp B---CTT-SCHHHHHHHHHHTTCCEEEE
T ss_pred C---CCc-ChHHHHHHHHHHhCCCEEEe
Confidence 0 122 22334456678899998854
No 52
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=96.27 E-value=0.065 Score=52.16 Aligned_cols=178 Identities=14% Similarity=0.205 Sum_probs=111.3
Q ss_pred CccccccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHH
Q 038230 193 GMKRVLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELE 272 (480)
Q Consensus 193 ~i~r~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~ 272 (480)
.+++...+++..++- .+|+| ++-++. .+.+++++.|++..+.|||+|.+=..- ....+..+
T Consensus 3 ~m~~~v~v~~~~ig~-g~PkI--cvpl~~---------~t~~e~l~~a~~~~~~~aD~vElR~D~-------l~~~~~~~ 63 (258)
T 4h3d_A 3 AMKRKVQVKNITIGE-GRPKI--CVPIIG---------KNKKDIIKEAKELKDACLDIIEWRVDF-------FENVENIK 63 (258)
T ss_dssp -CCCCEEETTEEETS-SSCEE--EEEECC---------SSHHHHHHHHHHHTTSSCSEEEEEGGG-------CTTTTCHH
T ss_pred CCcceEEEcCEEeCC-CCCEE--EEEeCC---------CCHHHHHHHHHHHhhcCCCEEEEeecc-------ccccCCHH
Confidence 356777788888765 47888 455565 578999999999999999999997532 11112244
Q ss_pred HHHHHHHHHHcCCcCCCCeEEE--eCC------------CHHHHHHHHHcC-CCEEecCCCCCCC---chHHHHHHhcCC
Q 038230 273 RLIPVLEAVLTMPEMEGKLVSV--DTF------------YSKVASEAVGKG-AHIVNDVSAGQLD---PDMYKVVAGLKV 334 (480)
Q Consensus 273 rl~~vi~~l~~~~~~~~~pISI--DT~------------~~~v~~aaL~~G-~~iINdVsg~~~d---~~m~~l~~~~~~ 334 (480)
.+...+..+++.. .++|+-+ =|. +.+..+++++.| +++| ||--...+ +++.+.+.+.++
T Consensus 64 ~v~~~l~~lr~~~--~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~i-DvEl~~~~~~~~~l~~~a~~~~~ 140 (258)
T 4h3d_A 64 EVKEVLYELRSYI--HDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLI-DVELFMGDEVIDEVVNFAHKKEV 140 (258)
T ss_dssp HHHHHHHHHHHHC--TTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEE-EEEGGGCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhc--CCCCEEEEEechhhCCCCCCCHHHHHHHHHHHHhcCCchhh-HHhhhccHHHHHHHHHHHHhCCC
Confidence 5556666666532 2455433 221 234566777776 7777 45432211 345666778899
Q ss_pred CEEEE-cC-CCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc-----c
Q 038230 335 PYVAM-HM-RGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL-----A 407 (480)
Q Consensus 335 ~vVlm-h~-~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l-----~ 407 (480)
.+|+. |+ .++|.. +.+.+++.++.+.|-+-=+|.. ..++.++++.+++-. .
T Consensus 141 kiI~S~Hdf~~TP~~-----------------~el~~~~~~~~~~gaDIvKia~-----~~~~~~D~l~Ll~~~~~~~~~ 198 (258)
T 4h3d_A 141 KVIISNHDFNKTPKK-----------------EEIVSRLCRMQELGADLPKIAV-----MPQNEKDVLVLLEATNEMFKI 198 (258)
T ss_dssp EEEEEEEESSCCCCH-----------------HHHHHHHHHHHHTTCSEEEEEE-----CCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCH-----------------HHHHHHHHHHHHhCCCEEEEEE-----ccCCHHHHHHHHHHHHHHHHh
Confidence 99986 43 455531 3456778888888854224443 457888888877543 2
Q ss_pred cCCCcEE
Q 038230 408 ASHAPIL 414 (480)
Q Consensus 408 ~~g~Pil 414 (480)
..+.|++
T Consensus 199 ~~~~P~I 205 (258)
T 4h3d_A 199 YADRPII 205 (258)
T ss_dssp TCSSCBE
T ss_pred cCCCCEE
Confidence 3577864
No 53
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=96.25 E-value=0.21 Score=49.48 Aligned_cols=210 Identities=14% Similarity=0.127 Sum_probs=119.9
Q ss_pred ccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeC------CC---CCCCCC-CCCCH
Q 038230 198 LPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIG------AQ---STRPMA-TKISA 267 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG------~e---StrP~a-~~v~~ 267 (480)
+.+++..++.+.++.|++=.|+- -|.+.+++.|+++.+.||+.. +. .+ .|.|++ .....
T Consensus 6 i~i~~~~iG~~~~~~vIAGpc~~----------~~~e~a~~~a~~lk~~ga~~~-~~~v~k~~f~k~prts~~sf~g~~l 74 (292)
T 1o60_A 6 VKIGNIDVANDKPFVLFGGMNVL----------ESRDMAMQVCEAYVKVTEKLG-VPYVFKASFDKANRSSIHSYRGPGM 74 (292)
T ss_dssp EEETTEEECTTSCCEEEEEEEEC----------CCHHHHHHHHHHHHHHHHHHT-CCEEEEEESCCTTCSSTTSCCCSCH
T ss_pred EEECCEEECCCCceEEEEecCCc----------cCHHHHHHHHHHHHHHhhhhC-EeEEEhhhcccCCCCChHHhhhhhH
Confidence 44566666666667776645543 378999999999999998753 22 11 233321 12223
Q ss_pred HHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCC-CCchHHHHHHhcCCCEEEEcCCCCCC
Q 038230 268 EKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQ-LDPDMYKVVAGLKVPYVAMHMRGDPS 346 (480)
Q Consensus 268 ~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~-~d~~m~~l~~~~~~~vVlmh~~g~p~ 346 (480)
++.++.+ ..+.+. .++|+.-+-+++..++...+ +++++- |.+++ ..-++++-+++.+.||++-. |+-.
T Consensus 75 ~~gl~~l----~~~~~~---~Glp~~te~~d~~~~~~l~~-~vd~~k-IgA~~~~n~~Ll~~~a~~~kPV~lk~--G~~~ 143 (292)
T 1o60_A 75 EEGLKIF----QELKDT---FGVKIITDVHEIYQCQPVAD-VVDIIQ-LPAFLARQTDLVEAMAKTGAVINVKK--PQFL 143 (292)
T ss_dssp HHHHHHH----HHHHHH---HCCEEEEECCSGGGHHHHHT-TCSEEE-ECGGGTTCHHHHHHHHHTTCEEEEEC--CTTS
T ss_pred HHHHHHH----HHHHHH---cCCcEEEecCCHHHHHHHHh-cCCEEE-ECcccccCHHHHHHHHcCCCcEEEeC--CCCC
Confidence 4444443 333333 38999999999999999887 688876 44422 23558888889999999843 3222
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccC----hhHHHHHHHhcccCCCcEEEe--e---
Q 038230 347 TMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKK----AEHNLDILLGLAASHAPILIG--P--- 417 (480)
Q Consensus 347 ~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~----~~~~~~~lr~l~~~g~Pil~G--~--- 417 (480)
+++ .....++.+...|-+ +=+++-=|..|..+ .-.++..+++ ..+++|+.+= +
T Consensus 144 t~~----------------ei~~Av~~i~~~Gn~-~i~L~~rg~~~~y~~~~~dl~~i~~lk~-~~~~~pV~~D~sH~~q 205 (292)
T 1o60_A 144 SPS----------------QMGNIVEKIEECGND-KIILCDRGTNFGYDNLIVDMLGFSVMKK-ASKGSPVIFDVTHSLQ 205 (292)
T ss_dssp CGG----------------GHHHHHHHHHHTTCC-CEEEEECCEECSTTCEECCTTHHHHHHH-HTTSCCEEEEHHHHCC
T ss_pred CHH----------------HHHHHHHHHHHcCCC-eEEEEECCCCCCCCccccCHHHHHHHHh-hCCCCCEEEECCCccc
Confidence 221 123446677788876 22445556544221 1123444443 1238998772 1
Q ss_pred ----ccccccccccCCCCcCcccHHHHHHHHHHHHcCCc--EEEcC
Q 038230 418 ----SRKRFLGEICNRPSADERDPATIASITAGVLGGAN--IVRVH 457 (480)
Q Consensus 418 ----SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~--IlRvH 457 (480)
|.|+..| +|.... .++..|+..||+ +|-+|
T Consensus 206 ~p~~~~~~~~g---------~~~~~~-~ia~aAva~Ga~Gl~IE~H 241 (292)
T 1o60_A 206 CRDPFGAASSG---------RRAQVT-ELARSGLAVGIAGLFLEAH 241 (292)
T ss_dssp ---------------------CTTHH-HHHHHHHHHCCSEEEEEEE
T ss_pred ccCccccCCCC---------ChhHHH-HHHHHHHHcCCCEEEEEec
Confidence 3333321 232222 223345568999 99999
No 54
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=96.20 E-value=0.25 Score=46.92 Aligned_cols=107 Identities=11% Similarity=0.145 Sum_probs=72.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHH----------HHHHHHHHHHHHHcCCcCCCCeEEEeCC-CH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEK----------ELERLIPVLEAVLTMPEMEGKLVSVDTF-YS 299 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~e----------E~~rl~~vi~~l~~~~~~~~~pISIDT~-~~ 299 (480)
.+.+..++.++.+.+. ||+|-+|...+.|..+.-.... -+.....+++.+++. +++||-+=++ ++
T Consensus 16 ~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~---~~~pv~~~~~~~~ 91 (248)
T 1geq_A 16 PDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRH---SSTPIVLMTYYNP 91 (248)
T ss_dssp SCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTT---CCCCEEEEECHHH
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhh---CCCCEEEEeccch
Confidence 3567899999999888 9999999755555433210000 133456788888876 3677766664 65
Q ss_pred -------HHHHHHHHcCCCEEecCCCCCCC-chHHHHHHhcCCCEEEEcC
Q 038230 300 -------KVASEAVGKGAHIVNDVSAGQLD-PDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 300 -------~v~~aaL~~G~~iINdVsg~~~d-~~m~~l~~~~~~~vVlmh~ 341 (480)
+.++.++++|++.|---+....+ .++.+.++++|..++++-+
T Consensus 92 ~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 141 (248)
T 1geq_A 92 IYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAA 141 (248)
T ss_dssp HHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEEC
T ss_pred hhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEEC
Confidence 78999999999977532211111 4688888999988876543
No 55
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=96.15 E-value=0.11 Score=55.66 Aligned_cols=186 Identities=12% Similarity=0.062 Sum_probs=108.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC-----------
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMA-TKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF----------- 297 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a-~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~----------- 297 (480)
.++.++-++.|+.+.+.|.+.|++|+.++.... ..++ +++++++..+.+.+. +..++.=++
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~-~d~~e~lr~l~~~~~------~~~l~~L~R~~N~~G~~~yp 115 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLN-EDPWERLRTFRKLMP------NSRLQMLLRGQNLLGYRHYN 115 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSC-CCHHHHHHHHHHHCT------TSCEEEEECGGGTTSSSCCC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccC-CCHHHHHHHHHHhCC------CCEEEEEeccccccCcccCc
Confidence 367888999999999999999999975541100 0111 245666655444322 344444222
Q ss_pred ---CHHHHHHHHHcCCCEEecCCCCCCC---chHHHHHHhcCCCE--EEEcCCCCCCccccccccchhhHHHHHHHHHHH
Q 038230 298 ---YSKVASEAVGKGAHIVNDVSAGQLD---PDMYKVVAGLKVPY--VAMHMRGDPSTMQNEENLQYDDVCKQVASELYS 369 (480)
Q Consensus 298 ---~~~v~~aaL~~G~~iINdVsg~~~d---~~m~~l~~~~~~~v--Vlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~ 369 (480)
...-+++++++|+++|.=..+.+.- ...++.++++|..+ .++...+.+-+ .+++.+
T Consensus 116 ddv~~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~----------------~e~~~~ 179 (539)
T 1rqb_A 116 DEVVDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHT----------------VEGYVK 179 (539)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCC----------------HHHHHH
T ss_pred ccccHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCC----------------HHHHHH
Confidence 2345788899999998844443322 34677788888876 35555443321 156678
Q ss_pred HHHHHHHCCCCCCCEEE-ecCCCCccChhHHHHHHHhc-c-cC-CCcEEEeeccccccccccCCCCcCcccHHHHHHHHH
Q 038230 370 KVRDAELSGIPAWRIII-DPGLGFSKKAEHNLDILLGL-A-AS-HAPILIGPSRKRFLGEICNRPSADERDPATIASITA 445 (480)
Q Consensus 370 ~i~~a~~~Gi~~~~Iil-DPgiGf~k~~~~~~~~lr~l-~-~~-g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~ 445 (480)
.++.+.++|.. .|.| |- .|... +.+..++++.+ + .+ +.|+=+ |. - .++ +...|-+..
T Consensus 180 ~a~~l~~~Gad--~I~L~DT-~G~~~-P~~v~~lv~~l~~~~p~~i~I~~-H~----------H---nd~-GlAvAN~la 240 (539)
T 1rqb_A 180 LAGQLLDMGAD--SIALKDM-AALLK-PQPAYDIIKAIKDTYGQKTQINL-HC----------H---STT-GVTEVSLMK 240 (539)
T ss_dssp HHHHHHHTTCS--EEEEEET-TCCCC-HHHHHHHHHHHHHHHCTTCCEEE-EE----------B---CTT-SCHHHHHHH
T ss_pred HHHHHHHcCCC--EEEeCCC-CCCcC-HHHHHHHHHHHHHhcCCCceEEE-Ee----------C---CCC-ChHHHHHHH
Confidence 88888899985 4433 54 33332 34445566665 2 23 566532 11 0 122 223344556
Q ss_pred HHHcCCcEEEcC
Q 038230 446 GVLGGANIVRVH 457 (480)
Q Consensus 446 a~~~Ga~IlRvH 457 (480)
|++.||+++.+.
T Consensus 241 AveAGa~~VD~t 252 (539)
T 1rqb_A 241 AIEAGVDVVDTA 252 (539)
T ss_dssp HHHTTCSEEEEB
T ss_pred HHHhCCCEEEEe
Confidence 778888887653
No 56
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.80 E-value=0.047 Score=51.39 Aligned_cols=147 Identities=16% Similarity=0.121 Sum_probs=84.8
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCH-HHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYS-KVASEA 305 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~-~v~~aa 305 (480)
+.+.+++++.+++ ++.|+|++++|.+-. +..=.++|+.|++.. ++.|+-+|. ..| ..++.+
T Consensus 15 ~~~~~~~~~~~~~-~~~~vd~ie~g~~~~------------~~~G~~~i~~lr~~~--~~~~i~ld~~l~d~p~~~~~~~ 79 (218)
T 3jr2_A 15 QTNLTDAVAVASN-VASYVDVIEVGTILA------------FAEGMKAVSTLRHNH--PNHILVCDMKTTDGGAILSRMA 79 (218)
T ss_dssp CSSHHHHHHHHHH-HGGGCSEEEECHHHH------------HHHTTHHHHHHHHHC--TTSEEEEEEEECSCHHHHHHHH
T ss_pred CCCHHHHHHHHHH-hcCCceEEEeCcHHH------------HhcCHHHHHHHHHhC--CCCcEEEEEeecccHHHHHHHH
Confidence 3578999999998 488999999995311 111124567777642 255666543 123 357888
Q ss_pred HHcCCCEEecCCCCCCC--chHHHHHHhcCCCEEE-EcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCC
Q 038230 306 VGKGAHIVNDVSAGQLD--PDMYKVVAGLKVPYVA-MHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAW 382 (480)
Q Consensus 306 L~~G~~iINdVsg~~~d--~~m~~l~~~~~~~vVl-mh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~ 382 (480)
.++|+++|.--...... .+.++.++++|+.+++ +-. |.|. +.+..+.+.|++
T Consensus 80 ~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~---~~T~--------------------~~~~~~~~~g~d-- 134 (218)
T 3jr2_A 80 FEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYG---NWTM--------------------QDAKAWVDLGIT-- 134 (218)
T ss_dssp HHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCS---SCCH--------------------HHHHHHHHTTCC--
T ss_pred HhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeee---cCCH--------------------HHHHHHHHcCcc--
Confidence 89999999744322111 3456678889987764 321 1121 122233455875
Q ss_pred CEEEecCC--CC-c-cChhHHHHHHHhcccCCCcEEEe
Q 038230 383 RIIIDPGL--GF-S-KKAEHNLDILLGLAASHAPILIG 416 (480)
Q Consensus 383 ~IilDPgi--Gf-~-k~~~~~~~~lr~l~~~g~Pil~G 416 (480)
-+++=++. +| + +-..+.++.+|++...++|+.++
T Consensus 135 ~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~ 172 (218)
T 3jr2_A 135 QAIYHRSRDAELAGIGWTTDDLDKMRQLSALGIELSIT 172 (218)
T ss_dssp EEEEECCHHHHHHTCCSCHHHHHHHHHHHHTTCEEEEE
T ss_pred ceeeeeccccccCCCcCCHHHHHHHHHHhCCCCCEEEE
Confidence 45553321 11 1 11234566777764457888764
No 57
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=95.69 E-value=0.14 Score=51.49 Aligned_cols=182 Identities=14% Similarity=0.086 Sum_probs=105.2
Q ss_pred CccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC-CCHHHHHHHH
Q 038230 228 GKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT-FYSKVASEAV 306 (480)
Q Consensus 228 g~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT-~~~~v~~aaL 306 (480)
+..++.++-++.|+.+.+.|.+.|++|. |.+ .+.+++++..+.+.+ .+..++.=+ .+.+-++.|+
T Consensus 22 ~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~----p~~----~~~d~e~v~~i~~~~------~~~~i~~l~r~~~~~i~~a~ 87 (325)
T 3eeg_A 22 GCQLNTEEKIIVAKALDELGVDVIEAGF----PVS----SPGDFNSVVEITKAV------TRPTICALTRAKEADINIAG 87 (325)
T ss_dssp ---CCTTHHHHHHHHHHHHTCSEEEEEC----TTS----CHHHHHHHHHHHHHC------CSSEEEEECCSCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeC----CCC----CHhHHHHHHHHHHhC------CCCEEEEeecCCHHHHHHHH
Confidence 3457788999999999999999999994 322 235677765555433 255666544 5777788888
Q ss_pred Hc----CCCEEecCCCCC-----------C------CchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHH
Q 038230 307 GK----GAHIVNDVSAGQ-----------L------DPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVAS 365 (480)
Q Consensus 307 ~~----G~~iINdVsg~~-----------~------d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~ 365 (480)
++ |++.|.-..+.. . -.++++.+++++..++.-...+. +.+ .+
T Consensus 88 ~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~------~~~----------~~ 151 (325)
T 3eeg_A 88 EALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAG------RAD----------QA 151 (325)
T ss_dssp HHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGG------GSC----------HH
T ss_pred HhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccc------cch----------HH
Confidence 87 888765321110 0 02567888899988765332211 111 15
Q ss_pred HHHHHHHHHHHCCCCCCCEEE-ecCCCCccChhHHHHHHHhcc--cCCCc-EEEeeccccccccccCCCCcCcccHHHHH
Q 038230 366 ELYSKVRDAELSGIPAWRIII-DPGLGFSKKAEHNLDILLGLA--ASHAP-ILIGPSRKRFLGEICNRPSADERDPATIA 441 (480)
Q Consensus 366 ~l~~~i~~a~~~Gi~~~~Iil-DPgiGf~k~~~~~~~~lr~l~--~~g~P-il~G~SrKsfi~~v~g~~~~~~r~~~t~a 441 (480)
++.+.++.+.++|.. .|.| |- .|.. ++.+..++++.++ .++.+ +-+|+- . -+-.+...|
T Consensus 152 ~~~~~~~~~~~~G~~--~i~l~DT-~G~~-~P~~v~~lv~~l~~~~~~~~~~~i~~H-------~------Hnd~GlA~A 214 (325)
T 3eeg_A 152 FLARMVEAVIEAGAD--VVNIPDT-TGYM-LPWQYGERIKYLMDNVSNIDKAILSAH-------C------HNDLGLATA 214 (325)
T ss_dssp HHHHHHHHHHHHTCS--EEECCBS-SSCC-CHHHHHHHHHHHHHHCSCGGGSEEEEC-------B------CCTTSCHHH
T ss_pred HHHHHHHHHHhcCCC--EEEecCc-cCCc-CHHHHHHHHHHHHHhCCCCCceEEEEE-------e------CCCCCHHHH
Confidence 667778888889986 3433 43 3332 2344455666652 23311 333331 0 111122334
Q ss_pred HHHHHHHcCCcEEEc
Q 038230 442 SITAGVLGGANIVRV 456 (480)
Q Consensus 442 ~~~~a~~~Ga~IlRv 456 (480)
-+..|++.|++.+.+
T Consensus 215 N~laA~~aGa~~vd~ 229 (325)
T 3eeg_A 215 NSLAALQNGARQVEC 229 (325)
T ss_dssp HHHHHHHHTCCEEEE
T ss_pred HHHHHHHhCCCEEEE
Confidence 456677889888765
No 58
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=95.64 E-value=0.31 Score=51.40 Aligned_cols=186 Identities=10% Similarity=0.032 Sum_probs=108.0
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC----------C
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMA-TKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF----------Y 298 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a-~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~----------~ 298 (480)
.++.++-++.|+.+.+.|.+.|++|+.+|.... ..++ +++|+++..+.+.+ .+.+++.=+. .
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~-~d~~e~l~~i~~~~------~~~~l~~l~R~~N~~G~~~~~ 98 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLG-EDPWQRLRLLKQAM------PNTPLQMLLRGQNLLGYRHYA 98 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTC-CCHHHHHHHHHHHC------SSSCEEEEECGGGTTSSSCCC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccC-CCHHHHHHHHHHhC------CCCeEEEEeccccccCccccc
Confidence 367788899999999999999999975541100 0111 24566665444322 1444543332 1
Q ss_pred ----HHHHHHHHHcCCCEEecCCCCCCC---chHHHHHHhcCCCEE--EEcCCCCCCccccccccchhhHHHHHHHHHHH
Q 038230 299 ----SKVASEAVGKGAHIVNDVSAGQLD---PDMYKVVAGLKVPYV--AMHMRGDPSTMQNEENLQYDDVCKQVASELYS 369 (480)
Q Consensus 299 ----~~v~~aaL~~G~~iINdVsg~~~d---~~m~~l~~~~~~~vV--lmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~ 369 (480)
..-+++|+++|+++|.=..+.+.- ...++.++++|..+. ++...|.+-+ .+++.+
T Consensus 99 ddv~~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~----------------~e~~~~ 162 (464)
T 2nx9_A 99 DDVVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHN----------------LQTWVD 162 (464)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCC----------------HHHHHH
T ss_pred chhhHHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCC----------------HHHHHH
Confidence 345678889999999844443322 346777888888764 3333443321 156678
Q ss_pred HHHHHHHCCCCCCCEE-EecCCCCccChhHHHHHHHhc-ccCCCcEEEeeccccccccccCCCCcCcccHHHHHHHHHHH
Q 038230 370 KVRDAELSGIPAWRII-IDPGLGFSKKAEHNLDILLGL-AASHAPILIGPSRKRFLGEICNRPSADERDPATIASITAGV 447 (480)
Q Consensus 370 ~i~~a~~~Gi~~~~Ii-lDPgiGf~k~~~~~~~~lr~l-~~~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~ 447 (480)
.++.+.++|.. .|. -|- .|... +.+..++++.+ +..+.|+=+ +. - .++ +...|-+..|+
T Consensus 163 ~a~~l~~~Gad--~I~l~DT-~G~~~-P~~v~~lv~~l~~~~~~~i~~-H~----------H---nd~-GlAvAN~laAv 223 (464)
T 2nx9_A 163 VAQQLAELGVD--SIALKDM-AGILT-PYAAEELVSTLKKQVDVELHL-HC----------H---STA-GLADMTLLKAI 223 (464)
T ss_dssp HHHHHHHTTCS--EEEEEET-TSCCC-HHHHHHHHHHHHHHCCSCEEE-EE----------C---CTT-SCHHHHHHHHH
T ss_pred HHHHHHHCCCC--EEEEcCC-CCCcC-HHHHHHHHHHHHHhcCCeEEE-EE----------C---CCC-ChHHHHHHHHH
Confidence 88888999986 453 354 33332 34445666666 234666532 10 0 112 22334455677
Q ss_pred HcCCcEEEcC
Q 038230 448 LGGANIVRVH 457 (480)
Q Consensus 448 ~~Ga~IlRvH 457 (480)
+.||+++.+.
T Consensus 224 ~AGa~~VD~t 233 (464)
T 2nx9_A 224 EAGVDRVDTA 233 (464)
T ss_dssp HTTCSEEEEB
T ss_pred HhCCCEEEEe
Confidence 8888887654
No 59
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.60 E-value=0.27 Score=46.75 Aligned_cols=88 Identities=19% Similarity=0.309 Sum_probs=65.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC-CHHHHHHHHHcCC
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF-YSKVASEAVGKGA 310 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~-~~~v~~aaL~~G~ 310 (480)
+.+++++.++.+++.|+++|-+..-+ +. ..+ .++.+++.. .++.+..+|. ..+-++.|+++|+
T Consensus 27 ~~~~~~~~~~al~~gGv~~iel~~k~--~~-----~~~-------~i~~l~~~~--~~l~vgaGtvl~~d~~~~A~~aGA 90 (224)
T 1vhc_A 27 NADDILPLADTLAKNGLSVAEITFRS--EA-----AAD-------AIRLLRANR--PDFLIAAGTVLTAEQVVLAKSSGA 90 (224)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTS--TT-----HHH-------HHHHHHHHC--TTCEEEEESCCSHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccC--ch-----HHH-------HHHHHHHhC--cCcEEeeCcEeeHHHHHHHHHCCC
Confidence 45779999999999999999998421 21 112 344444432 2566777774 7899999999999
Q ss_pred CEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 311 HIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 311 ~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+.+ +++. .++++++.++++|.+++.
T Consensus 91 d~v--~~p~-~d~~v~~~ar~~g~~~i~ 115 (224)
T 1vhc_A 91 DFV--VTPG-LNPKIVKLCQDLNFPITP 115 (224)
T ss_dssp SEE--ECSS-CCHHHHHHHHHTTCCEEC
T ss_pred CEE--EECC-CCHHHHHHHHHhCCCEEe
Confidence 999 6664 478889999999998875
No 60
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=95.45 E-value=1.6 Score=43.34 Aligned_cols=216 Identities=16% Similarity=0.198 Sum_probs=121.4
Q ss_pred cccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCE----EEeC-CC---CCCCC-CCCCCH
Q 038230 197 VLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADM----IDIG-AQ---STRPM-ATKISA 267 (480)
Q Consensus 197 ~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdi----IDIG-~e---StrP~-a~~v~~ 267 (480)
.+.+++..++.+.+..++. -|=| .-|.+.+++.|+++.+.|+.+ +=-+ .+ -|.|+ ......
T Consensus 28 ~v~~~~i~~G~~~~l~vIa----GPCs------ies~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~ 97 (298)
T 3fs2_A 28 TVKVGNVTFSNSAPLALIA----GPCQ------METRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGL 97 (298)
T ss_dssp SEEETTEEECTTSCCEEEE----ECSB------CCCHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCH
T ss_pred eEEECCEEECCCCceEEEE----eCCc------CCCHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCH
Confidence 4566666666554544443 2322 246889999999999876432 2222 11 23332 122222
Q ss_pred HHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCC-CCchHHHHHHhcCCCEEEEcCCCCCC
Q 038230 268 EKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQ-LDPDMYKVVAGLKVPYVAMHMRGDPS 346 (480)
Q Consensus 268 ~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~-~d~~m~~l~~~~~~~vVlmh~~g~p~ 346 (480)
++-++.+ +.+.+. .++|+.-+-++++.++...+. +|++- |.+++ ..-+++.-+++.+.||++-- |.--
T Consensus 98 ~~GL~~L----~~~~~e---~GLpv~Tev~D~~~v~~l~~~-vd~lk-IgA~~~~n~~LLr~va~~gkPVilK~--Gms~ 166 (298)
T 3fs2_A 98 EKALEVF----SDLKKE---YGFPVLTDIHTEEQCAAVAPV-VDVLQ-IPAFLCRQTDLLIAAARTGRVVNVKK--GQFL 166 (298)
T ss_dssp HHHHHHH----HHHHHH---HCCCEEEECCSHHHHHHHTTT-CSEEE-ECGGGTTCHHHHHHHHHTTSEEEEEC--CTTC
T ss_pred HHHHHHH----HHHHHh---cCCeEEEEeCCHHHHHHHHhh-CCEEE-ECccccCCHHHHHHHHccCCcEEEeC--CCCC
Confidence 3445443 333333 389999999999999998887 88875 54432 23558888889999999843 3222
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEE-ecCCCCccCh-hHHHHHHHhcccCCCcEEEeeccccccc
Q 038230 347 TMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIII-DPGLGFSKKA-EHNLDILLGLAASHAPILIGPSRKRFLG 424 (480)
Q Consensus 347 ~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DPgiGf~k~~-~~~~~~lr~l~~~g~Pil~G~SrKsfi~ 424 (480)
++ +.+...++++.+.|-+ +|+| .=|+-|+.+. .-|+..+..++.+++|+.+=.|.
T Consensus 167 t~----------------~ei~~ave~i~~~Gn~--~iiL~erg~~y~~~~~~vdl~~i~~lk~~~~PV~~D~sH----- 223 (298)
T 3fs2_A 167 AP----------------WDMKNVLAKITESGNP--NVLATERGVSFGYNTLVSDMRALPIMAGLGAPVIFDATH----- 223 (298)
T ss_dssp CG----------------GGHHHHHHHHHTTTCC--CEEEEECCEECSSSCEECCTTHHHHHHTTTSCEEEEHHH-----
T ss_pred CH----------------HHHHHHHHHHHHcCCC--eEEEEECCCCCCCCCCccCHHHHHHHHHcCCcEEEcCCC-----
Confidence 22 1224667777888876 6666 7677664222 11333333332369999762221
Q ss_pred cccCCC------CcCcccHHHHHHHHHHHHcCCc--EEEcCC
Q 038230 425 EICNRP------SADERDPATIASITAGVLGGAN--IVRVHN 458 (480)
Q Consensus 425 ~v~g~~------~~~~r~~~t~a~~~~a~~~Ga~--IlRvHd 458 (480)
-+.+| ...+|.....+ +..|+..||+ +|-+|-
T Consensus 224 -svq~p~~~~~~s~G~r~~v~~~-a~AAvAlGAdGl~IE~H~ 263 (298)
T 3fs2_A 224 -SVQQPGGQGGSTGGQREFVETL-ARAAVAVGVAGFFIETHE 263 (298)
T ss_dssp -HTCCCC--------CGGGHHHH-HHHHHHHCCSEEEEEEES
T ss_pred -ccccCCcccCCCCCchhhHHHH-HHHHHHcCCCEEEEEecC
Confidence 10111 01234443332 4457778999 999995
No 61
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=95.42 E-value=0.83 Score=44.89 Aligned_cols=216 Identities=12% Similarity=0.094 Sum_probs=119.6
Q ss_pred ccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeC------CC---CCCCC-CCCCCHHH
Q 038230 200 IGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIG------AQ---STRPM-ATKISAEK 269 (480)
Q Consensus 200 ~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG------~e---StrP~-a~~v~~~e 269 (480)
+++..++.+.++.|++=.|+- -|.+.+++.|+++.+.||+.. +. .+ .|.|+ ......++
T Consensus 5 i~~~~iG~~~~~~vIAGpc~~----------~~~e~a~~~a~~lk~~ga~~~-~~~v~k~~f~k~prts~~~~~g~~l~~ 73 (280)
T 2qkf_A 5 INDITLGNNSPFVLFGGINVL----------ESLDSTLQTCAHYVEVTRKLG-IPYIFKASFDKANRSSIHSYRGVGLEE 73 (280)
T ss_dssp ETTEEESTTSCCEEEEEEEEC----------CCHHHHHHHHHHHHHHHHHHT-CCEEEEEESCCSSCSSSSSCCCSCHHH
T ss_pred eCCEEECCCCceEEEEecCCC----------CCHHHHHHHHHHHHHhhhhcc-eeEEEeeeeecCCCCChHHhhccchHH
Confidence 444555555667777744433 378999999999999998865 44 11 23332 22223344
Q ss_pred HHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCC-CCchHHHHHHhcCCCEEEEcCCCCCCcc
Q 038230 270 ELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQ-LDPDMYKVVAGLKVPYVAMHMRGDPSTM 348 (480)
Q Consensus 270 E~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~-~d~~m~~l~~~~~~~vVlmh~~g~p~~~ 348 (480)
.++.+.. +.+. .++|+.-+-+++..++...+. ++++- |.+.. ..-++++-+++.+.||++-. |+-.++
T Consensus 74 gl~~l~~----~~~~---~Gl~~~te~~d~~~~~~l~~~-~d~~k-Iga~~~~n~~ll~~~a~~~kPV~lk~--G~~~t~ 142 (280)
T 2qkf_A 74 GLKIFEK----VKAE---FGIPVITDVHEPHQCQPVAEV-CDVIQ-LPAFLARQTDLVVAMAKTGNVVNIKK--PQFLSP 142 (280)
T ss_dssp HHHHHHH----HHHH---HCCCEEEECCSGGGHHHHHHH-CSEEE-ECGGGTTBHHHHHHHHHTCCEEEEEC--CTTSCG
T ss_pred HHHHHHH----HHHH---cCCcEEEecCCHHHHHHHHhh-CCEEE-ECcccccCHHHHHHHHcCCCcEEEEC--CCCCCH
Confidence 4544433 3333 389999999999999999888 88875 44322 23458888889999999843 322222
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccC----hhHHHHHHHhcccCCCcEEEeecccccc-
Q 038230 349 QNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKK----AEHNLDILLGLAASHAPILIGPSRKRFL- 423 (480)
Q Consensus 349 ~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~----~~~~~~~lr~l~~~g~Pil~G~SrKsfi- 423 (480)
+ .....++.+...|-+ +=+++-=|..|..+ ...++..+++ ..+++|+.+=.|.--..
T Consensus 143 ~----------------e~~~A~~~i~~~Gn~-~i~L~~rg~~~~~~~~~~dl~~i~~lk~-~~~~~pV~~D~sH~~q~~ 204 (280)
T 2qkf_A 143 S----------------QMKNIVEKFHEAGNG-KLILCERGSSFGYDNLVVDMLGFGVMKQ-TCGNLPVIFDVTHSLQTR 204 (280)
T ss_dssp G----------------GHHHHHHHHHHTTCC-CEEEEECCEECSTTCEECCTTHHHHHHH-HTTTCCEEEEHHHHCC--
T ss_pred H----------------HHHHHHHHHHHcCCC-eEEEEECCCCCCCCccccCHHHHHHHHH-hCCCCCEEEECCCCcccc
Confidence 1 123446677788876 23444556545221 1123444544 22389987621110000
Q ss_pred ccccCCCCcCcccHHHHHHHHHHHHcCCc--EEEcC
Q 038230 424 GEICNRPSADERDPATIASITAGVLGGAN--IVRVH 457 (480)
Q Consensus 424 ~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~--IlRvH 457 (480)
|. .|.....+|.... .++..|+..||+ +|-+|
T Consensus 205 ~~-~~~~s~g~~~~~~-~~a~aava~Ga~G~~IE~H 238 (280)
T 2qkf_A 205 DA-GSAASGGRRAQAL-DLALAGMATRLAGLFLESH 238 (280)
T ss_dssp ---------CHHHHHH-HHHHHHHTTCCSEEEEEC-
T ss_pred Cc-cccccCCchhhHH-HHHHHHHHcCCCEEEEeec
Confidence 00 0100011233322 223456678995 99999
No 62
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=95.35 E-value=1.2 Score=44.08 Aligned_cols=221 Identities=12% Similarity=0.128 Sum_probs=118.3
Q ss_pred cccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHc----CCCEEEeCC----CCCCCC-CCCCCHHH
Q 038230 199 PIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISE----GADMIDIGA----QSTRPM-ATKISAEK 269 (480)
Q Consensus 199 ~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~----GAdiIDIG~----eStrP~-a~~v~~~e 269 (480)
.+++..++-+.+..+|. -|=| .-+.+.+++.|+++.+. |..++==+. .-|.|+ ......++
T Consensus 6 ~~~~i~iG~~~~~~vIa----GPCs------ie~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~ 75 (288)
T 3tml_A 6 KLCDFEVGLDQPFFLIA----GTCV------VESEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDE 75 (288)
T ss_dssp EETTEEESTTSCCEEEE----ECSB------CCCHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------CHHH
T ss_pred EECCEEECCCCceEEEE----eCCc------CCCHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHH
Confidence 34555555544544444 2311 13689999999999887 666553221 122232 11222234
Q ss_pred HHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCC-CCchHHHHHHhcCCCEEEEcCCCCCCcc
Q 038230 270 ELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQ-LDPDMYKVVAGLKVPYVAMHMRGDPSTM 348 (480)
Q Consensus 270 E~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~-~d~~m~~l~~~~~~~vVlmh~~g~p~~~ 348 (480)
-++.+ +.+.+. .++|+.-+-++++.++...+. ++++- |.+++ ..-+++.-+++.+.||++-. |.--++
T Consensus 76 GL~~L----~~~~~e---~Glp~~tev~d~~~v~~l~~~-vd~lk-IgA~~~~n~~LLr~~a~~gkPVilK~--G~~~t~ 144 (288)
T 3tml_A 76 GLRIL----SEVKRQ---LGLPVLTDVHSIDEIEQVASV-VDVLQ-TPAFLCRQTDFIHACARSGKPVNIKK--GQFLAP 144 (288)
T ss_dssp HHHHH----HHHHHH---HCCCEEEECCSGGGHHHHHHH-CSEEE-ECGGGTTCHHHHHHHHTSSSCEEEEC--CTTCCT
T ss_pred HHHHH----HHHHHh---cCCeEEEEeCCHHHHHHHHHh-CCEEE-ECcccccCHHHHHHHHccCCcEEEeC--CCCCCH
Confidence 45443 333333 389999999999999999888 88886 54432 23568888889999999843 222121
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHCCC----CCCCEE-EecCCCCccCh-hHHHHHHHhcccCCCcEEEeecccc-
Q 038230 349 QNEENLQYDDVCKQVASELYSKVRDAELSGI----PAWRII-IDPGLGFSKKA-EHNLDILLGLAASHAPILIGPSRKR- 421 (480)
Q Consensus 349 ~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi----~~~~Ii-lDPgiGf~k~~-~~~~~~lr~l~~~g~Pil~G~SrKs- 421 (480)
+.+...++++.+.|- ..++|+ +.=|+.|+.+. .-|+..+..++.+++|+.+=.|.--
T Consensus 145 ----------------~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~pV~~D~sHs~q 208 (288)
T 3tml_A 145 ----------------HDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAIMRETNAPVVFDATHSVQ 208 (288)
T ss_dssp ----------------THHHHHHHHHHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHHHHHGGGGSSCEEEEHHHHTC
T ss_pred ----------------HHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHHHHHHHhcCCcEEEcCCcccc
Confidence 112344555555555 223555 56677663221 1245555555447999976222100
Q ss_pred ccccccCCCCcCcccHHHHHHHHHHHHcCCc--EEEcCC
Q 038230 422 FLGEICNRPSADERDPATIASITAGVLGGAN--IVRVHN 458 (480)
Q Consensus 422 fi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~--IlRvHd 458 (480)
.-|. .|.....+|.....+ +..|+..||+ +|-+|-
T Consensus 209 ~p~~-~~~~s~G~r~~v~~~-a~AAvA~GadGl~iE~H~ 245 (288)
T 3tml_A 209 LPGG-QGTSSGGQREFVPVL-ARAAVATGVAGLFMETHP 245 (288)
T ss_dssp CCC---------CTTHHHHH-HHHHHHHCCSEEEEEEES
T ss_pred cCCc-ccCCCCCchhhHHHH-HHHHHHcCCCEEEEeecc
Confidence 0000 000001234443332 4457778998 999995
No 63
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=95.11 E-value=0.94 Score=46.35 Aligned_cols=180 Identities=14% Similarity=0.123 Sum_probs=106.4
Q ss_pred CccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHH
Q 038230 228 GKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAV 306 (480)
Q Consensus 228 g~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL 306 (480)
+..++.++-++.|+.+.+.|.+.|++|. |.+ + ..+.+. ++.+++.. .+.++.. --.+++-+++|+
T Consensus 19 ~~~~~~~~k~~ia~~L~~~Gv~~IE~g~----p~~---~-~~~~~~----~~~i~~~~--~~~~v~~~~r~~~~di~~a~ 84 (382)
T 2ztj_A 19 KANFSTQDKVEIAKALDEFGIEYIEVTT----PVA---S-PQSRKD----AEVLASLG--LKAKVVTHIQCRLDAAKVAV 84 (382)
T ss_dssp TCCCCHHHHHHHHHHHHHHTCSEEEECC----TTS---C-HHHHHH----HHHHHTSC--CSSEEEEEEESCHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCcCEEEEcC----CcC---C-HHHHHH----HHHHHhcC--CCcEEEEEcccChhhHHHHH
Confidence 3457899999999999999999999996 332 1 233433 34445431 1334433 334577799999
Q ss_pred HcCCCEEecCCCCCC--------C--------chHHHHHHhcC--CCEEEEcCCCCCCccccccccchhhHHHHHHHHHH
Q 038230 307 GKGAHIVNDVSAGQL--------D--------PDMYKVVAGLK--VPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELY 368 (480)
Q Consensus 307 ~~G~~iINdVsg~~~--------d--------~~m~~l~~~~~--~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~ 368 (480)
+.|++.|+=..+... + .+.++.++++| ..+.+....+ +. .+ .+++.
T Consensus 85 ~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~-~~-----~~----------~~~~~ 148 (382)
T 2ztj_A 85 ETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDT-FR-----SE----------EQDLL 148 (382)
T ss_dssp HTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTT-TT-----SC----------HHHHH
T ss_pred HcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeC-CC-----CC----------HHHHH
Confidence 999998773322211 1 24677788889 7777655532 11 11 15666
Q ss_pred HHHHHHHHCCCCCCCEEE-ecCCCCccChhHHHHHHHhc-cc--CCCcEEEeeccccccccccCCCCcCcccHHHHHHHH
Q 038230 369 SKVRDAELSGIPAWRIII-DPGLGFSKKAEHNLDILLGL-AA--SHAPILIGPSRKRFLGEICNRPSADERDPATIASIT 444 (480)
Q Consensus 369 ~~i~~a~~~Gi~~~~Iil-DPgiGf~k~~~~~~~~lr~l-~~--~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~ 444 (480)
+.++.+.++ .. .|.| |- .|... +.+..++++.+ +. ++.|+ |+ .. - .++ +...|-+.
T Consensus 149 ~~~~~~~~~-a~--~i~l~DT-~G~~~-P~~~~~lv~~l~~~~~~~~~i--~~-------H~--H---nd~-GlAvAN~l 208 (382)
T 2ztj_A 149 AVYEAVAPY-VD--RVGLADT-VGVAT-PRQVYALVREVRRVVGPRVDI--EF-------HG--H---NDT-GCAIANAY 208 (382)
T ss_dssp HHHHHHGGG-CS--EEEEEET-TSCCC-HHHHHHHHHHHHHHHTTTSEE--EE-------EE--B---CTT-SCHHHHHH
T ss_pred HHHHHHHHh-cC--EEEecCC-CCCCC-HHHHHHHHHHHHHhcCCCCeE--EE-------Ee--C---CCc-cHHHHHHH
Confidence 777777777 43 4544 54 44433 44455666666 23 45554 32 11 0 122 22334456
Q ss_pred HHHHcCCcEEEcC
Q 038230 445 AGVLGGANIVRVH 457 (480)
Q Consensus 445 ~a~~~Ga~IlRvH 457 (480)
.|++.||+.+.+.
T Consensus 209 aAv~aGa~~vd~t 221 (382)
T 2ztj_A 209 EAIEAGATHVDTT 221 (382)
T ss_dssp HHHHTTCCEEEEB
T ss_pred HHHHhCCCEEEEc
Confidence 7888999998854
No 64
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=94.94 E-value=0.14 Score=50.40 Aligned_cols=181 Identities=15% Similarity=0.217 Sum_probs=108.8
Q ss_pred ccccCccccccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHH
Q 038230 189 IGKEGMKRVLPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAE 268 (480)
Q Consensus 189 ~q~~~i~r~~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~ 268 (480)
.|...++. +.+++..++- .+|+|.- -+|. .+.+++++.+++..+.|||+|.+=..--. ..+.
T Consensus 20 ~~~~~m~~-v~v~~~~~g~-g~p~i~v--~l~~---------~~~~e~~~~~~~~~~~gaD~VElRvD~l~----~~~~- 81 (276)
T 3o1n_A 20 FQSNAMKT-VTVRDLVVGE-GAPKIIV--SLMG---------KTITDVKSEALAYREADFDILEWRVDHFA----NVTT- 81 (276)
T ss_dssp -----CCC-EEETTEEETS-SSCEEEE--EECC---------SSHHHHHHHHHHHTTSCCSEEEEEGGGCT----TTTC-
T ss_pred eccCCceE-EEECCEEeCC-CCcEEEE--EeCC---------CCHHHHHHHHHHHhhCCCCEEEEEecccc----ccCc-
Confidence 33344433 5577777755 4677744 4453 57899999999988899999999754221 1111
Q ss_pred HHHHHHHHHHHHHHcCCcCCCCe--EEEeC------------CCHHHHHHHHHcC-CCEEecCCCCCCC---chHHHHHH
Q 038230 269 KELERLIPVLEAVLTMPEMEGKL--VSVDT------------FYSKVASEAVGKG-AHIVNDVSAGQLD---PDMYKVVA 330 (480)
Q Consensus 269 eE~~rl~~vi~~l~~~~~~~~~p--ISIDT------------~~~~v~~aaL~~G-~~iINdVsg~~~d---~~m~~l~~ 330 (480)
.+.+...+..|++.. .++| +.+-| .+-+.++.|++.| +++| ||--...+ .++.+.++
T Consensus 82 --~~~v~~~l~~lr~~~--~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyI-DvEl~~~~~~~~~l~~~a~ 156 (276)
T 3o1n_A 82 --AESVLEAAGAIREII--TDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMI-DLELFTGDDEVKATVGYAH 156 (276)
T ss_dssp --HHHHHHHHHHHHHHC--CSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEE-EEEGGGCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHhc--CCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEE-EEECcCCHHHHHHHHHHHH
Confidence 233444555555432 1344 33333 3456888888889 8888 57543212 23444557
Q ss_pred hcCCCEEEE-cC-CCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc--
Q 038230 331 GLKVPYVAM-HM-RGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL-- 406 (480)
Q Consensus 331 ~~~~~vVlm-h~-~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l-- 406 (480)
+.++.+|+. |+ .++|. .+.+.++++++.+.|-+-=+|.. .+++.++++.+++-.
T Consensus 157 ~~~~kvI~S~Hdf~~tP~-----------------~~el~~~~~~~~~~GaDIvKia~-----~a~s~~Dvl~Ll~~~~~ 214 (276)
T 3o1n_A 157 QHNVAVIMSNHDFHKTPA-----------------AEEIVQRLRKMQELGADIPKIAV-----MPQTKADVLTLLTATVE 214 (276)
T ss_dssp HTTCEEEEEEEESSCCCC-----------------HHHHHHHHHHHHHTTCSEEEEEE-----CCSSHHHHHHHHHHHHH
T ss_pred hCCCEEEEEeecCCCCcC-----------------HHHHHHHHHHHHHcCCCEEEEEe-----cCCChHHHHHHHHHHHH
Confidence 889999986 54 44552 14456778888898864224544 458888888887643
Q ss_pred -c--cCCCcEE
Q 038230 407 -A--ASHAPIL 414 (480)
Q Consensus 407 -~--~~g~Pil 414 (480)
+ ..+.|++
T Consensus 215 ~~~~~~~~PlI 225 (276)
T 3o1n_A 215 MQERYADRPII 225 (276)
T ss_dssp HHHHTCCSCCE
T ss_pred HHhcCCCCCEE
Confidence 2 2577854
No 65
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=94.76 E-value=3.5 Score=40.57 Aligned_cols=195 Identities=13% Similarity=0.130 Sum_probs=111.3
Q ss_pred CCHHHHHHHHHHHHHcCCCE----EEeC-C---CCCCCC-CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHH
Q 038230 231 QSVEAAVSQVRLMISEGADM----IDIG-A---QSTRPM-ATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKV 301 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdi----IDIG-~---eStrP~-a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v 301 (480)
-+.+.+++.|+++.+.|+.+ +=-+ . .-|.|+ ......++-++.+. .+.+. .++|+.-+-++++.
T Consensus 31 e~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~----~~~~e---~Glp~~Tev~d~~~ 103 (285)
T 3sz8_A 31 ESLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFA----EVKAR---FGVPVITDVHEAEQ 103 (285)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHH----HHHHH---HCCCEEEECCSGGG
T ss_pred CCHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHH----HHHHh---cCCeEEEEeCCHHH
Confidence 46889999999999876443 2221 1 134443 22333345555443 33333 38999999999999
Q ss_pred HHHHHHcCCCEEecCCCCC-CCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCC
Q 038230 302 ASEAVGKGAHIVNDVSAGQ-LDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIP 380 (480)
Q Consensus 302 ~~aaL~~G~~iINdVsg~~-~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~ 380 (480)
++...+. ++++- |.+++ ..-+++.-+++.+.||++-. |+--+++ .+...++++.+.|-+
T Consensus 104 v~~l~~~-vd~lq-IgA~~~~n~~LLr~va~~gkPVilK~--G~~~t~~----------------ei~~ave~i~~~Gn~ 163 (285)
T 3sz8_A 104 AAPVAEI-ADVLQ-VPAFLARQTDLVVAIAKAGKPVNVKK--PQFMSPT----------------QLKHVVSKCGEVGND 163 (285)
T ss_dssp HHHHHTT-CSEEE-ECGGGTTCHHHHHHHHHTSSCEEEEC--CTTSCGG----------------GTHHHHHHHHHTTCC
T ss_pred HHHHHHh-CCEEE-ECccccCCHHHHHHHHccCCcEEEeC--CCCCCHH----------------HHHHHHHHHHHcCCC
Confidence 9999888 88875 54432 23568888889999999843 3222221 124566777888976
Q ss_pred CCCEEE-ecCCCCccCh----hHHHHHHHhcccC-CCcEEEeecccc-ccccccCCCCcCcccHHHHHHHHHHHHcCCc-
Q 038230 381 AWRIII-DPGLGFSKKA----EHNLDILLGLAAS-HAPILIGPSRKR-FLGEICNRPSADERDPATIASITAGVLGGAN- 452 (480)
Q Consensus 381 ~~~Iil-DPgiGf~k~~----~~~~~~lr~l~~~-g~Pil~G~SrKs-fi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~- 452 (480)
+|+| .=|+-|+.+. -.++..+|+ .+ ++|+.+=.|.-- .-|. .|.....+|..... ++..|+..||+
T Consensus 164 --~i~L~erg~~y~~~~~~vdl~~i~~lk~--~~~~~pV~~D~sHs~q~p~~-~~~~s~G~r~~v~~-~a~AAvA~GA~g 237 (285)
T 3sz8_A 164 --RVMLCERGSSFGYDNLVVDMLGFRQMAE--TTGGCPVIFDVTHSLQCRDP-LGDASGGRRRQVLD-LARAGIAVGIAG 237 (285)
T ss_dssp --CEEEEECCEECSSSCEECCTTHHHHHHH--HTTSCCEEEETTTTCC----------------HHH-HHHHHHHHCCSE
T ss_pred --cEEEEeCCCCCCCCcCccCHHHHHHHHH--hCCCCCEEEeCCCccccCCC-cCCCCCCchhhHHH-HHHHHHHhCCCE
Confidence 6665 7777664322 233444554 34 799976222110 0000 00000123433332 24457778999
Q ss_pred -EEEcCC
Q 038230 453 -IVRVHN 458 (480)
Q Consensus 453 -IlRvHd 458 (480)
+|-+|-
T Consensus 238 l~IE~H~ 244 (285)
T 3sz8_A 238 LFLEAHP 244 (285)
T ss_dssp EEEEEES
T ss_pred EEEEecc
Confidence 999995
No 66
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=94.75 E-value=0.22 Score=48.03 Aligned_cols=81 Identities=16% Similarity=0.223 Sum_probs=58.1
Q ss_pred HHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCC--EEecC
Q 038230 239 QVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAH--IVNDV 316 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~--iINdV 316 (480)
.++.+.++|||+|.+|+ | ..++ .+.+...++++++. ++||-+=+|..+.+ ..|+| |+.|+
T Consensus 25 ~~~~l~~~GaD~ielG~-S-----~Gvt----~~~~~~~v~~ir~~----~~Pivlm~y~~n~i----~~G~dg~iiPdL 86 (240)
T 1viz_A 25 QLEILCESGTDAVIIGG-S-----DGVT----EDNVLRMMSKVRRF----LVPCVLEVSAIEAI----VPGFDLYFIPSV 86 (240)
T ss_dssp HHHHHHTSCCSEEEECC----------C----HHHHHHHHHHHTTS----SSCEEEECSCGGGC----CSCCSEEEEEEE
T ss_pred HHHHHHHcCCCEEEECC-C-----CCCC----HHHHHHHHHHhhCc----CCCEEEecCccccc----cCCCCEEEEccc
Confidence 36788999999999998 2 2233 45566778888762 89999999985333 56866 88888
Q ss_pred CCCCCCchH-----HHHHHhcC-----CCEEE
Q 038230 317 SAGQLDPDM-----YKVVAGLK-----VPYVA 338 (480)
Q Consensus 317 sg~~~d~~m-----~~l~~~~~-----~~vVl 338 (480)
-..+ +++. ...+++|| ...|.
T Consensus 87 p~ee-~~~~~~g~~~~a~~~~g~~~~~l~~i~ 117 (240)
T 1viz_A 87 LNSK-NADWIVGMHQKAMKEYGELMSMEEIVA 117 (240)
T ss_dssp TTBS-SGGGTTHHHHHHHHHCHHHHHHSCEEE
T ss_pred Cccc-ChhhhcchhHHHHHHcCCCCcceeeee
Confidence 7654 5666 58889999 66664
No 67
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=94.64 E-value=1.3 Score=44.87 Aligned_cols=199 Identities=16% Similarity=0.086 Sum_probs=119.5
Q ss_pred CcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCC-----EEEeCC--------CCC--CCCCCCCCHHH----H
Q 038230 210 KTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGAD-----MIDIGA--------QST--RPMATKISAEK----E 270 (480)
Q Consensus 210 ~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAd-----iIDIG~--------eSt--rP~a~~v~~~e----E 270 (480)
+|.|.+.+-+.- ..|.+-|.+......++||| .+=+=. .+. +...+....-+ .
T Consensus 5 ~~~IIAEig~NH--------nGdle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~ 76 (350)
T 3g8r_A 5 KPLFIFEMANNH--------MGNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQ 76 (350)
T ss_dssp CCEEEEECTTTT--------TTCSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCC
T ss_pred CCEEEEEECCCc--------cCcHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCC
Confidence 577777665553 34678888888888889998 543310 000 00011100000 1
Q ss_pred HHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCcccc
Q 038230 271 LERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQN 350 (480)
Q Consensus 271 ~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~ 350 (480)
++.+..+.+.-++. ++++.-.-++.+.++...+.|++++-=-|+.-.+-.+++.++++|-||++- +|.. |+
T Consensus 77 ~e~~~~L~~~~~~~----Gi~~~st~fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLs--tGms-tl-- 147 (350)
T 3g8r_A 77 PEQMQKLVAEMKAN----GFKAICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVAS--TAGA-RR-- 147 (350)
T ss_dssp HHHHHHHHHHHHHT----TCEEEEEECSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEE--CTTC-CH--
T ss_pred HHHHHHHHHHHHHc----CCcEEeccCCHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEE--CCCC-CH--
Confidence 22333334444544 899999999999999999999999984444433567899999999999984 3543 33
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEe-cCCCCccCh-hHHHHHHHhcc-cC-CCcEEEeeccccccccc
Q 038230 351 EENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIID-PGLGFSKKA-EHNLDILLGLA-AS-HAPILIGPSRKRFLGEI 426 (480)
Q Consensus 351 ~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilD-PgiGf~k~~-~~~~~~lr~l~-~~-g~Pil~G~SrKsfi~~v 426 (480)
+++...++.+.+.|- +|+|= ---+|.... .-|+..+..++ .+ ++|+ |.| +.-
T Consensus 148 --------------~Ei~~Ave~i~~~g~---~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpV--G~S-----dHt 203 (350)
T 3g8r_A 148 --------------EDIDKVVSFMLHRGK---DLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRI--GYS-----THE 203 (350)
T ss_dssp --------------HHHHHHHHHHHTTTC---CEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEE--EEE-----ECC
T ss_pred --------------HHHHHHHHHHHHcCC---CEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCE--EcC-----CCC
Confidence 334566667777774 46662 223443222 33455555552 35 7885 776 222
Q ss_pred cCCCCcCcccHHHHHHHHHHHHcCCcEEEcCC
Q 038230 427 CNRPSADERDPATIASITAGVLGGANIVRVHN 458 (480)
Q Consensus 427 ~g~~~~~~r~~~t~a~~~~a~~~Ga~IlRvHd 458 (480)
+|. +. +.+..|+..||.||-+|-
T Consensus 204 ~g~-----~~----~~~~AAvAlGA~vIEkH~ 226 (350)
T 3g8r_A 204 DPD-----LM----EPIMLAVAQGATVFEKHV 226 (350)
T ss_dssp CSS-----CC----HHHHHHHHTTCCEEEEEB
T ss_pred CCC-----cc----HHHHHHHHcCCCEEEEec
Confidence 121 11 223357789999999996
No 68
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=94.50 E-value=0.42 Score=45.88 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=55.0
Q ss_pred HHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCC--EEecCCC
Q 038230 241 RLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAH--IVNDVSA 318 (480)
Q Consensus 241 ~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~--iINdVsg 318 (480)
+++.+.|+|.|-||+. ..++ .+.+..+++.+++. ++|+-+=+++++.+ ..|+| ++.|+-.
T Consensus 30 ~~~~~~GtDaI~vGgs------~gvt----~~~~~~~v~~ik~~----~~Piil~p~~~~~~----~~gaD~il~pslln 91 (235)
T 3w01_A 30 DAICMSQTDAIMIGGT------DDVT----EDNVIHLMSKIRRY----PLPLVLEISNIESV----MPGFDFYFVPTVLN 91 (235)
T ss_dssp HHHHTSSCSEEEECCS------SCCC----HHHHHHHHHHHTTS----CSCEEEECCCSTTC----CTTCSEEEEEEETT
T ss_pred HHHHHcCCCEEEECCc------CCcC----HHHHHHHHHHhcCc----CCCEEEecCCHHHh----hcCCCEEEEccccC
Confidence 3468999999999982 2232 34555667788873 89999999998444 44777 6677765
Q ss_pred CCCCchH-----HHHHHhcCC-----CEEE
Q 038230 319 GQLDPDM-----YKVVAGLKV-----PYVA 338 (480)
Q Consensus 319 ~~~d~~m-----~~l~~~~~~-----~vVl 338 (480)
.+ ++.. .+.++++|. .+|.
T Consensus 92 ~~-~~~~i~g~~~~a~~~~gl~~~~~e~i~ 120 (235)
T 3w01_A 92 ST-DVAFHNGTLLEALKTYGHSIDFEEVIF 120 (235)
T ss_dssp BS-SGGGTTHHHHHHHHHHGGGCCGGGEEE
T ss_pred CC-CcchhhhHHHHHHHHcCCCCcccceee
Confidence 44 5555 457899997 6665
No 69
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.48 E-value=1.3 Score=42.18 Aligned_cols=139 Identities=13% Similarity=0.110 Sum_probs=84.9
Q ss_pred CCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE-Ee----------
Q 038230 227 GGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS-VD---------- 295 (480)
Q Consensus 227 gg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS-ID---------- 295 (480)
|+...+.+...+.|+.+.+.||..|-+|. .++ |+.+++. +++||- +.
T Consensus 29 ~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~------------~~~-------i~~ir~~---v~~Pvig~~k~d~~~~~~~ 86 (232)
T 3igs_A 29 GSPLDKPEIVAAMALAAEQAGAVAVRIEG------------IDN-------LRMTRSL---VSVPIIGIIKRDLDESPVR 86 (232)
T ss_dssp TCTTCSHHHHHHHHHHHHHTTCSEEEEES------------HHH-------HHHHHTT---CCSCEEEECBCCCSSCCCC
T ss_pred CCCCCCcchHHHHHHHHHHCCCeEEEECC------------HHH-------HHHHHHh---cCCCEEEEEeecCCCcceE
Confidence 33355678899999999999999998862 122 4555665 477852 11
Q ss_pred -CCCHHHHHHHHHcCCCEEecCCCCCCC----chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHH
Q 038230 296 -TFYSKVASEAVGKGAHIVNDVSAGQLD----PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSK 370 (480)
Q Consensus 296 -T~~~~v~~aaL~~G~~iINdVsg~~~d----~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~ 370 (480)
+.+.+.+++++++|+|+|--......+ .++++.+++++..+++-.. + .+.
T Consensus 87 I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~-----t--------------------~ee 141 (232)
T 3igs_A 87 ITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS-----S--------------------VDD 141 (232)
T ss_dssp BSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC-----S--------------------HHH
T ss_pred eCccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC-----C--------------------HHH
Confidence 134567889999999987533332112 4678888888766654211 1 133
Q ss_pred HHHHHHCCCCCCCEEEecCCCC---ccChhHHHHHHHhcccCCCcEEE
Q 038230 371 VRDAELSGIPAWRIIIDPGLGF---SKKAEHNLDILLGLAASHAPILI 415 (480)
Q Consensus 371 i~~a~~~Gi~~~~IilDPgiGf---~k~~~~~~~~lr~l~~~g~Pil~ 415 (480)
..++.+.|.+ +|.=-..|+ .+...-+++++++++..++|++.
T Consensus 142 a~~a~~~Gad---~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~~ipvIA 186 (232)
T 3igs_A 142 GLACQRLGAD---IIGTTMSGYTTPDTPEEPDLPLVKALHDAGCRVIA 186 (232)
T ss_dssp HHHHHHTTCS---EEECTTTTSSSSSCCSSCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHhCCCC---EEEEcCccCCCCCCCCCCCHHHHHHHHhcCCcEEE
Confidence 4567789985 552111233 12223357788887323889875
No 70
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=94.36 E-value=1.1 Score=42.45 Aligned_cols=139 Identities=17% Similarity=0.150 Sum_probs=84.9
Q ss_pred CCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE-E---e-------
Q 038230 227 GGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS-V---D------- 295 (480)
Q Consensus 227 gg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS-I---D------- 295 (480)
|+...+.+...+.|+.+.+.||.-|-+|. .++ |+.+++. +++||- + |
T Consensus 29 ~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~------------~~~-------i~~ir~~---v~~Pvig~~k~~~~~~~~~ 86 (229)
T 3q58_A 29 GSPMDKPEIVAAMAQAAASAGAVAVRIEG------------IEN-------LRTVRPH---LSVPIIGIIKRDLTGSPVR 86 (229)
T ss_dssp TSTTCSHHHHHHHHHHHHHTTCSEEEEES------------HHH-------HHHHGGG---CCSCEEEECBCCCSSCCCC
T ss_pred CCCCCCcchHHHHHHHHHHCCCcEEEECC------------HHH-------HHHHHHh---cCCCEEEEEeecCCCCceE
Confidence 34455778899999999999999999862 122 4555665 477742 2 2
Q ss_pred -CCCHHHHHHHHHcCCCEEecCCCCCCC----chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHH
Q 038230 296 -TFYSKVASEAVGKGAHIVNDVSAGQLD----PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSK 370 (480)
Q Consensus 296 -T~~~~v~~aaL~~G~~iINdVsg~~~d----~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~ 370 (480)
|.+.+.+++++++|+|+|--......+ .++++.++++|..++.-.. + .+.
T Consensus 87 I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~-----t--------------------~ee 141 (229)
T 3q58_A 87 ITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS-----T--------------------VNE 141 (229)
T ss_dssp BSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS-----S--------------------HHH
T ss_pred eCccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecC-----C--------------------HHH
Confidence 134567889999999987533322112 4678888888766654211 1 123
Q ss_pred HHHHHHCCCCCCCEEEecCCCCc---cChhHHHHHHHhcccCCCcEEE
Q 038230 371 VRDAELSGIPAWRIIIDPGLGFS---KKAEHNLDILLGLAASHAPILI 415 (480)
Q Consensus 371 i~~a~~~Gi~~~~IilDPgiGf~---k~~~~~~~~lr~l~~~g~Pil~ 415 (480)
..++.+.|.+ +|.=-..|+. +...-+++++++++..++|++.
T Consensus 142 a~~a~~~Gad---~Ig~~~~g~t~~~~~~~~~~~li~~l~~~~ipvIA 186 (229)
T 3q58_A 142 GISCHQKGIE---FIGTTLSGYTGPITPVEPDLAMVTQLSHAGCRVIA 186 (229)
T ss_dssp HHHHHHTTCS---EEECTTTTSSSSCCCSSCCHHHHHHHHTTTCCEEE
T ss_pred HHHHHhCCCC---EEEecCccCCCCCcCCCCCHHHHHHHHHcCCCEEE
Confidence 4567789995 5521112331 2223357788887323889875
No 71
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=94.26 E-value=1.2 Score=42.48 Aligned_cols=165 Identities=15% Similarity=0.234 Sum_probs=95.2
Q ss_pred HHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCC--EEecCCC
Q 038230 241 RLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAH--IVNDVSA 318 (480)
Q Consensus 241 ~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~--iINdVsg 318 (480)
++..+.|+|.|-||| | ..++ .+.+..+++.+++. ++|+-+=+++++.+ -.|+| ++.|+-.
T Consensus 25 ~~~~~~GtD~i~vGG-s-----~gvt----~~~~~~~v~~ik~~----~~Pvvlfp~~~~~v----~~gaD~~l~pslln 86 (228)
T 3vzx_A 25 EILCESGTDAVIIGG-S-----DGVT----EDNVLRMMSKVRRF----LVPCVLEVSAIEAI----VPGFDLYFIPSVLN 86 (228)
T ss_dssp HHHHTSSCSEEEECC-C-----SCCC----HHHHHHHHHHHTTS----SSCEEEECSCGGGC----CSCCSEEEEEEETT
T ss_pred HHHHHcCCCEEEECC-c-----CCCC----HHHHHHHHHHhhcc----CCCEEEeCCCHHHc----cccCCEEEEeeecC
Confidence 345799999999998 2 2233 24555667777763 89999999998544 35777 6666654
Q ss_pred CCCCchHH-----HHHHhcCC-----CEEE-----EcCCCCCCcc-ccccccchhhHHHHHHHHHHHHHHHHHHCCCCCC
Q 038230 319 GQLDPDMY-----KVVAGLKV-----PYVA-----MHMRGDPSTM-QNEENLQYDDVCKQVASELYSKVRDAELSGIPAW 382 (480)
Q Consensus 319 ~~~d~~m~-----~l~~~~~~-----~vVl-----mh~~g~p~~~-~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~ 382 (480)
++ ++..+ +.++++|. .+|. +...+..... ..++.+. . +.+......++-.|+.
T Consensus 87 ~~-~~~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~----~----e~~~~~a~~a~~~g~~-- 155 (228)
T 3vzx_A 87 SK-NADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLN----M----DDIVAYARVSELLQLP-- 155 (228)
T ss_dssp BS-SGGGTTHHHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCC----H----HHHHHHHHHHHHTTCS--
T ss_pred CC-CcchhhhHHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCC----H----HHHHHHHHHHHHcCCC--
Confidence 44 56665 77899985 5544 3321110000 0001111 1 1122333344556665
Q ss_pred CEEEecCCCCccChhHHHHHHHhc-ccC-CCcEEEeeccccccccccCCCCcCcccHHHHHHHHHHHHcCCcEEEcCC
Q 038230 383 RIIIDPGLGFSKKAEHNLDILLGL-AAS-HAPILIGPSRKRFLGEICNRPSADERDPATIASITAGVLGGANIVRVHN 458 (480)
Q Consensus 383 ~IilDPgiGf~k~~~~~~~~lr~l-~~~-g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~IlRvHd 458 (480)
=+++|= .|-.. +.++++++ +.. +.|+.+|- |- |....+. .+. .||+-+-|=.
T Consensus 156 ~VYld~-sG~~~----~~~~i~~i~~~~~~~Pv~vGG----------GI-----~t~e~a~---~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 156 IFYLEY-SGVLG----DIEAVKKTKAVLETSTLFYGG----------GI-----KDAETAK---QYA-EHADVIVVGN 209 (228)
T ss_dssp EEEEEC-TTSCC----CHHHHHHHHHHCSSSEEEEES----------SC-----CSHHHHH---HHH-TTCSEEEECT
T ss_pred EEEecC-CCCcC----CHHHHHHHHHhcCCCCEEEeC----------CC-----CCHHHHH---HHH-hCCCEEEECh
Confidence 356664 44321 57778877 346 79999984 32 2233332 122 6999888876
No 72
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=94.13 E-value=0.63 Score=47.54 Aligned_cols=180 Identities=15% Similarity=0.144 Sum_probs=106.2
Q ss_pred CccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC-CCHHHHHHHH
Q 038230 228 GKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT-FYSKVASEAV 306 (480)
Q Consensus 228 g~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT-~~~~v~~aaL 306 (480)
|..++.++-++.|+.+.+.|.+.|++|. |.+ .+.+++++..+.+.+ .+..++.=+ .+.+-++.|+
T Consensus 28 ~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~----p~~----~~~d~e~v~~i~~~~------~~~~i~~l~r~~~~di~~a~ 93 (370)
T 3rmj_A 28 GAAMTKEEKIRVARQLEKLGVDIIEAGF----AAA----SPGDFEAVNAIAKTI------TKSTVCSLSRAIERDIRQAG 93 (370)
T ss_dssp TCCCCHHHHHHHHHHHHHHTCSEEEEEE----GGG----CHHHHHHHHHHHTTC------SSSEEEEEEESSHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEEeC----CCC----CHHHHHHHHHHHHhC------CCCeEEEEecCCHHHHHHHH
Confidence 4458899999999999999999999995 322 246777765544322 244554333 4788888888
Q ss_pred H----cCCCEEecCCCCC---------CC--------chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHH
Q 038230 307 G----KGAHIVNDVSAGQ---------LD--------PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVAS 365 (480)
Q Consensus 307 ~----~G~~iINdVsg~~---------~d--------~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~ 365 (480)
+ +|++.|+=..+.. .. .++++.+++++..+......+. +.+ .+
T Consensus 94 ~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~------r~~----------~~ 157 (370)
T 3rmj_A 94 EAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDAL------RSE----------ID 157 (370)
T ss_dssp HHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGG------GSC----------HH
T ss_pred HHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCC------ccC----------HH
Confidence 8 6877665322211 01 1256677888887765433211 111 15
Q ss_pred HHHHHHHHHHHCCCCCCCEEE-ecCCCCccChhHHHHHHHhcc--cCC---CcEEEeeccccccccccCCCCcCcccHHH
Q 038230 366 ELYSKVRDAELSGIPAWRIII-DPGLGFSKKAEHNLDILLGLA--ASH---APILIGPSRKRFLGEICNRPSADERDPAT 439 (480)
Q Consensus 366 ~l~~~i~~a~~~Gi~~~~Iil-DPgiGf~k~~~~~~~~lr~l~--~~g---~Pil~G~SrKsfi~~v~g~~~~~~r~~~t 439 (480)
++.+.++.+.++|.. .|.| |- +|... +.+..++++.++ .++ .|+ |+ +. - .++. ..
T Consensus 158 ~~~~~~~~~~~~Ga~--~i~l~DT-~G~~~-P~~~~~lv~~l~~~~~~~~~~~l--~~-------H~--H---nd~G-lA 218 (370)
T 3rmj_A 158 FLAEICGAVIEAGAT--TINIPDT-VGYSI-PYKTEEFFRELIAKTPNGGKVVW--SA-------HC--H---NDLG-LA 218 (370)
T ss_dssp HHHHHHHHHHHHTCC--EEEEECS-SSCCC-HHHHHHHHHHHHHHSTTGGGSEE--EE-------EC--B---CTTS-CH
T ss_pred HHHHHHHHHHHcCCC--EEEecCc-cCCcC-HHHHHHHHHHHHHhCCCcCceEE--EE-------Ee--C---CCCC-hH
Confidence 677888888999986 4443 43 44333 344455666652 233 444 32 10 0 1222 23
Q ss_pred HHHHHHHHHcCCcEEEc
Q 038230 440 IASITAGVLGGANIVRV 456 (480)
Q Consensus 440 ~a~~~~a~~~Ga~IlRv 456 (480)
.|-+..|++.||+.+.+
T Consensus 219 vAN~laAv~aGa~~vd~ 235 (370)
T 3rmj_A 219 VANSLAALKGGARQVEC 235 (370)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhCCCEEEE
Confidence 33456677888888765
No 73
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=93.92 E-value=0.14 Score=48.59 Aligned_cols=98 Identities=13% Similarity=0.348 Sum_probs=71.9
Q ss_pred cEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCC
Q 038230 211 TSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGK 290 (480)
Q Consensus 211 ~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~ 290 (480)
..++.|+-. .++++++..|+.+++.|.+.|.|-..+ |++ . ..|+.+++.+ .+.
T Consensus 13 ~~vi~Vir~-----------~~~~~a~~~a~al~~gGi~~iEvt~~t--~~a--------~----~~I~~l~~~~--p~~ 65 (217)
T 3lab_A 13 KPLIPVIVI-----------DDLVHAIPMAKALVAGGVHLLEVTLRT--EAG--------L----AAISAIKKAV--PEA 65 (217)
T ss_dssp CSEEEEECC-----------SCGGGHHHHHHHHHHTTCCEEEEETTS--TTH--------H----HHHHHHHHHC--TTS
T ss_pred CCEEEEEEc-----------CCHHHHHHHHHHHHHcCCCEEEEeCCC--ccH--------H----HHHHHHHHHC--CCC
Confidence 456666644 356899999999999999999996532 331 1 2345555543 356
Q ss_pred eEEEeC-CCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCC------CEEE
Q 038230 291 LVSVDT-FYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKV------PYVA 338 (480)
Q Consensus 291 pISIDT-~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~------~vVl 338 (480)
.|...| .+++.+++|+++|+++|-+- . .++++++.+++++. +++-
T Consensus 66 ~IGAGTVlt~~~a~~ai~AGA~fivsP--~-~~~evi~~~~~~~v~~~~~~~~~P 117 (217)
T 3lab_A 66 IVGAGTVCTADDFQKAIDAGAQFIVSP--G-LTPELIEKAKQVKLDGQWQGVFLP 117 (217)
T ss_dssp EEEEECCCSHHHHHHHHHHTCSEEEES--S-CCHHHHHHHHHHHHHCSCCCEEEE
T ss_pred eEeeccccCHHHHHHHHHcCCCEEEeC--C-CcHHHHHHHHHcCCCccCCCeEeC
Confidence 677665 47999999999999999554 3 37999999999988 7764
No 74
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=93.90 E-value=0.25 Score=47.40 Aligned_cols=143 Identities=18% Similarity=0.270 Sum_probs=92.2
Q ss_pred cEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCC
Q 038230 211 TSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGK 290 (480)
Q Consensus 211 ~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~ 290 (480)
..|+.|+-.. +++++++.|+.+++.|++.|.|-..+ |+ .. ..|+.+++.. .++
T Consensus 34 ~~vv~Vir~~-----------~~~~a~~~a~al~~gGi~~iEvt~~t--~~-----a~-------e~I~~l~~~~--~~~ 86 (232)
T 4e38_A 34 LKVIPVIAID-----------NAEDIIPLGKVLAENGLPAAEITFRS--DA-----AV-------EAIRLLRQAQ--PEM 86 (232)
T ss_dssp HCEEEEECCS-----------SGGGHHHHHHHHHHTTCCEEEEETTS--TT-----HH-------HHHHHHHHHC--TTC
T ss_pred CCEEEEEEcC-----------CHHHHHHHHHHHHHCCCCEEEEeCCC--CC-----HH-------HHHHHHHHhC--CCC
Confidence 3577776544 46789999999999999999996432 32 11 2234444432 245
Q ss_pred eEEEeC-CCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHH
Q 038230 291 LVSVDT-FYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYS 369 (480)
Q Consensus 291 pISIDT-~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~ 369 (480)
.+...| ..++.++.|+++|+++| ++.. .++++++.++++|.+++.=.+ +| +
T Consensus 87 ~iGaGTVlt~~~a~~Ai~AGA~fI--vsP~-~~~~vi~~~~~~gi~~ipGv~--Tp-----------------------t 138 (232)
T 4e38_A 87 LIGAGTILNGEQALAAKEAGATFV--VSPG-FNPNTVRACQEIGIDIVPGVN--NP-----------------------S 138 (232)
T ss_dssp EEEEECCCSHHHHHHHHHHTCSEE--ECSS-CCHHHHHHHHHHTCEEECEEC--SH-----------------------H
T ss_pred EEeECCcCCHHHHHHHHHcCCCEE--EeCC-CCHHHHHHHHHcCCCEEcCCC--CH-----------------------H
Confidence 555444 46999999999999999 5554 379999999999988874111 11 2
Q ss_pred HHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhcc--cCCCcEEE
Q 038230 370 KVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGLA--ASHAPILI 415 (480)
Q Consensus 370 ~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l~--~~g~Pil~ 415 (480)
.+.+|.++|.+ -|=+=| ....-..+.|+.++ .+++|++.
T Consensus 139 Ei~~A~~~Gad--~vK~FP-----a~~~gG~~~lkal~~p~p~ip~~p 179 (232)
T 4e38_A 139 TVEAALEMGLT--TLKFFP-----AEASGGISMVKSLVGPYGDIRLMP 179 (232)
T ss_dssp HHHHHHHTTCC--EEEECS-----TTTTTHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHcCCC--EEEECc-----CccccCHHHHHHHHHHhcCCCeee
Confidence 34456789986 333322 22212456677763 45778764
No 75
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=93.83 E-value=0.59 Score=46.50 Aligned_cols=136 Identities=18% Similarity=0.199 Sum_probs=87.8
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeE--EEeCCCHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQST------RPMATKISAEKELERLIPVLEAVLTMPEMEGKLV--SVDTFYSKV 301 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eSt------rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pI--SIDT~~~~v 301 (480)
|.+++.+.+.++++++.||.-+=|=.+.. .++...++.+|-.+|+.-+.++-.+.. .++.| =.|++-..-
T Consensus 91 yg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~--~d~~I~ARTDa~~~~g 168 (302)
T 3fa4_A 91 YGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIG--SDIVVIARTDSLQTHG 168 (302)
T ss_dssp TSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECCHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC--CCEEEEEEecccccCC
Confidence 34677888999999999999998876532 134567888888888887776654320 23333 347764333
Q ss_pred HHHHH-------HcCCCEEecCCCCCCCchHHHHHHhc-CCCEEEEcC-CC-CCCccccccccchhhHHHHHHHHHHHHH
Q 038230 302 ASEAV-------GKGAHIVNDVSAGQLDPDMYKVVAGL-KVPYVAMHM-RG-DPSTMQNEENLQYDDVCKQVASELYSKV 371 (480)
Q Consensus 302 ~~aaL-------~~G~~iINdVsg~~~d~~m~~l~~~~-~~~vVlmh~-~g-~p~~~~~~~~~~~~~v~~ev~~~l~~~i 371 (480)
+++|+ ++|||+|- +.|....+++..+++.. +.|+++.-. .| .|.- ..
T Consensus 169 ldeAi~Ra~ay~eAGAD~if-i~g~~~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~----------------------~~ 225 (302)
T 3fa4_A 169 YEESVARLRAARDAGADVGF-LEGITSREMARQVIQDLAGWPLLLNMVEHGATPSI----------------------SA 225 (302)
T ss_dssp HHHHHHHHHHHHTTTCSEEE-ETTCCCHHHHHHHHHHTTTSCEEEECCTTSSSCCC----------------------CH
T ss_pred HHHHHHHHHHHHHcCCCEEe-ecCCCCHHHHHHHHHHhcCCceeEEEecCCCCCCC----------------------CH
Confidence 44443 35999997 66655336788888887 488876432 22 2210 12
Q ss_pred HHHHHCCCCCCCEEEecCCCCc
Q 038230 372 RDAELSGIPAWRIIIDPGLGFS 393 (480)
Q Consensus 372 ~~a~~~Gi~~~~IilDPgiGf~ 393 (480)
+.+.+.|+ ++++=|...+.
T Consensus 226 ~eL~~lGv---~~v~~~~~~~r 244 (302)
T 3fa4_A 226 AEAKEMGF---RIIIFPFAALG 244 (302)
T ss_dssp HHHHHHTC---SEEEETTTTHH
T ss_pred HHHHHcCC---CEEEEchHHHH
Confidence 34467899 58998987663
No 76
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=93.81 E-value=0.64 Score=43.75 Aligned_cols=98 Identities=17% Similarity=0.339 Sum_probs=69.1
Q ss_pred cEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCC
Q 038230 211 TSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGK 290 (480)
Q Consensus 211 ~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~ 290 (480)
..++.|+-.. +.+++++.++.+++.|+++|-+..-+ |. ..+ .++.+++.. .++
T Consensus 16 ~~~i~v~r~~-----------~~~~~~~~~~al~~gGv~~iel~~k~--~~-----~~~-------~i~~l~~~~--~~~ 68 (214)
T 1wbh_A 16 GPVVPVIVVK-----------KLEHAVPMAKALVAGGVRVLNVTLRT--EC-----AVD-------AIRAIAKEV--PEA 68 (214)
T ss_dssp CSEEEEECCS-----------SGGGHHHHHHHHHHTTCCEEEEESCS--TT-----HHH-------HHHHHHHHC--TTS
T ss_pred CCEEEEEECC-----------CHHHHHHHHHHHHHcCCCEEEEeCCC--hh-----HHH-------HHHHHHHHC--cCC
Confidence 4467766543 35678999999999999999998422 21 112 334344332 245
Q ss_pred eEEEeC-CCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 291 LVSVDT-FYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 291 pISIDT-~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.+.-+| ...+-++.|+++|++.+ +++. .+++..+.++++|.+++.
T Consensus 69 ~vgagtvi~~d~~~~A~~aGAd~v--~~p~-~d~~v~~~~~~~g~~~i~ 114 (214)
T 1wbh_A 69 IVGAGTVLNPQQLAEVTEAGAQFA--ISPG-LTEPLLKAATEGTIPLIP 114 (214)
T ss_dssp EEEEESCCSHHHHHHHHHHTCSCE--EESS-CCHHHHHHHHHSSSCEEE
T ss_pred EEeeCEEEEHHHHHHHHHcCCCEE--EcCC-CCHHHHHHHHHhCCCEEE
Confidence 555554 45799999999999999 4554 489999999999998885
No 77
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=93.80 E-value=0.39 Score=45.76 Aligned_cols=87 Identities=20% Similarity=0.232 Sum_probs=57.6
Q ss_pred HHHHHHHHHcCCCEEEeCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEE--
Q 038230 237 VSQVRLMISEGADMIDIGAQS-TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIV-- 313 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eS-trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iI-- 313 (480)
.+++++..+.|||+|-+++.. .+|. .+..+++.+++. ++++..|....+.++.|.+.|+++|
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~-----------~l~~~i~~~~~~----g~~v~~~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPV-----------DIDSLLTRIRLH----GLLAMADCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSS-----------CHHHHHHHHHHT----TCEEEEECSSHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccCChH-----------HHHHHHHHHHHC----CCEEEEecCCHHHHHHHHhCCCCEEEe
Confidence 346677889999999988632 1331 233345556654 7899999999999999999999999
Q ss_pred ec--CCCC--C--CCchHHHHHHhcCCCEEE
Q 038230 314 ND--VSAG--Q--LDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 314 Nd--Vsg~--~--~d~~m~~l~~~~~~~vVl 338 (480)
|- .+.. . -+-++++-+++.++++|.
T Consensus 156 ~~~g~t~~~~~~~~~~~li~~l~~~~ipvIA 186 (229)
T 3q58_A 156 TLSGYTGPITPVEPDLAMVTQLSHAGCRVIA 186 (229)
T ss_dssp TTTTSSSSCCCSSCCHHHHHHHHTTTCCEEE
T ss_pred cCccCCCCCcCCCCCHHHHHHHHHcCCCEEE
Confidence 21 1111 1 122445555555777775
No 78
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=93.76 E-value=0.76 Score=43.81 Aligned_cols=95 Identities=14% Similarity=0.099 Sum_probs=54.9
Q ss_pred HHHHHHHHHcCCCE--EEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHH-HHHHHHcCCC
Q 038230 237 VSQVRLMISEGADM--IDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKV-ASEAVGKGAH 311 (480)
Q Consensus 237 ~~~A~~~v~~GAdi--IDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v-~~aaL~~G~~ 311 (480)
-+..+.+ +.|||+ +||==...-|+-.. =.++++.|++. ++.|+-+| +.+|+- ++.+.++|++
T Consensus 16 ~~~i~~~-~~gad~lHvDvmDG~fvpn~t~---------G~~~v~~lr~~---~~~~~dvhLmv~dp~~~i~~~~~aGAd 82 (231)
T 3ctl_A 16 KEQIEFI-DSHADYFHIDIMDGHFVPNLTL---------SPFFVSQVKKL---ATKPLDCHLMVTRPQDYIAQLARAGAD 82 (231)
T ss_dssp HHHHHHH-HTTCSCEEEEEECSSSSSCCCB---------CHHHHHHHHTT---CCSCEEEEEESSCGGGTHHHHHHHTCS
T ss_pred HHHHHHH-HcCCCEEEEEEEeCccCccchh---------cHHHHHHHHhc---cCCcEEEEEEecCHHHHHHHHHHcCCC
Confidence 3344555 899998 57621111243211 12467777875 34554443 335544 7889999999
Q ss_pred EEecCCCCC---CCchHHHHHHhcCCCEEEEcCCCCC
Q 038230 312 IVNDVSAGQ---LDPDMYKVVAGLKVPYVAMHMRGDP 345 (480)
Q Consensus 312 iINdVsg~~---~d~~m~~l~~~~~~~vVlmh~~g~p 345 (480)
+|- +-++. .-.+.++.++++|+.+.+.-+.++|
T Consensus 83 ~it-vh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp 118 (231)
T 3ctl_A 83 FIT-LHPETINGQAFRLIDEIRRHDMKVGLILNPETP 118 (231)
T ss_dssp EEE-ECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred EEE-ECcccCCccHHHHHHHHHHcCCeEEEEEECCCc
Confidence 985 22221 1257899999999876654333334
No 79
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=93.63 E-value=1.7 Score=45.19 Aligned_cols=193 Identities=18% Similarity=0.183 Sum_probs=111.3
Q ss_pred EEecCC-CCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCe-EE
Q 038230 216 ILNLTP-DSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKL-VS 293 (480)
Q Consensus 216 IlN~tp-DSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~p-IS 293 (480)
|+-.|| |-.---|..++.++-++.|+.+.+.|.++|.+|. |.+ + +.+++.+. .+.+.. .... ++
T Consensus 42 I~DtTLRDG~Q~~~~~~s~eeKl~Ia~~L~~~Gv~~IEvG~----P~a---s-p~d~~~~~----~i~~~~--~~~~v~~ 107 (423)
T 3ivs_A 42 IIESTLREGEQFANAFFDTEKKIQIAKALDNFGVDYIELTS----PVA---S-EQSRQDCE----AICKLG--LKCKILT 107 (423)
T ss_dssp EEECTTTGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECC----TTS---C-HHHHHHHH----HHHTSC--CSSEEEE
T ss_pred EEECCCCCCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEEee----ccc---C-HHHHHHHH----HHHhcC--CCCEEEE
Confidence 566664 3333334568999999999999999999999995 443 2 24444433 333321 1222 33
Q ss_pred EeCCCHHHHHHHHHcCCCEEecC---CCC------CCC--------chHHHHHHhcCCCEEEEcCCCCCCccccccccch
Q 038230 294 VDTFYSKVASEAVGKGAHIVNDV---SAG------QLD--------PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQY 356 (480)
Q Consensus 294 IDT~~~~v~~aaL~~G~~iINdV---sg~------~~d--------~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~ 356 (480)
.-..+.+-++.|+++|++.|+=+ |-. ..+ .+.++.++++|..|..-...+. +.+
T Consensus 108 ~~r~~~~di~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~------r~d--- 178 (423)
T 3ivs_A 108 HIRCHMDDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSF------RSD--- 178 (423)
T ss_dssp EEESCHHHHHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGG------GSC---
T ss_pred eeccChhhHHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCc------CCC---
Confidence 34567888999999998876633 210 111 1356778888888775432211 011
Q ss_pred hhHHHHHHHHHHHHHHHHHHCCCCCCCEEE-ecCCCCccChhHHHHHHHhc-ccCCCcEEEeeccccccccccCCCCcCc
Q 038230 357 DDVCKQVASELYSKVRDAELSGIPAWRIII-DPGLGFSKKAEHNLDILLGL-AASHAPILIGPSRKRFLGEICNRPSADE 434 (480)
Q Consensus 357 ~~v~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DPgiGf~k~~~~~~~~lr~l-~~~g~Pil~G~SrKsfi~~v~g~~~~~~ 434 (480)
.+++.+.++.+.++|.. .|.| |- +|... +.+..++++.+ +..+.|+ ++ +. =.+
T Consensus 179 -------~~~~~~v~~~~~~~Ga~--~i~l~DT-vG~~~-P~~v~~lv~~l~~~~~~~i--~~-------H~-----Hnd 233 (423)
T 3ivs_A 179 -------LVDLLSLYKAVDKIGVN--RVGIADT-VGCAT-PRQVYDLIRTLRGVVSCDI--EC-------HF-----HND 233 (423)
T ss_dssp -------HHHHHHHHHHHHHHCCS--EEEEEET-TSCCC-HHHHHHHHHHHHHHCSSEE--EE-------EE-----BCT
T ss_pred -------HHHHHHHHHHHHHhCCC--ccccCCc-cCcCC-HHHHHHHHHHHHhhcCCeE--EE-------EE-----CCC
Confidence 14566777888889986 4433 43 44332 34455666666 3345554 32 11 012
Q ss_pred ccHHHHHHHHHHHHcCCcEEEcC
Q 038230 435 RDPATIASITAGVLGGANIVRVH 457 (480)
Q Consensus 435 r~~~t~a~~~~a~~~Ga~IlRvH 457 (480)
+. ...|-+..|++.||+.+.+.
T Consensus 234 ~G-lAvAN~laAv~aGa~~vd~t 255 (423)
T 3ivs_A 234 TG-MAIANAYCALEAGATHIDTS 255 (423)
T ss_dssp TS-CHHHHHHHHHHTTCCEEEEB
T ss_pred Cc-hHHHHHHHHHHhCCCEEEEe
Confidence 32 23344566888999988653
No 80
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=93.58 E-value=0.45 Score=45.35 Aligned_cols=87 Identities=17% Similarity=0.203 Sum_probs=57.6
Q ss_pred HHHHHHHHHcCCCEEEeCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEe-
Q 038230 237 VSQVRLMISEGADMIDIGAQS-TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVN- 314 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eS-trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iIN- 314 (480)
.+++++..+.|||+|-+++.. .+| + .+..+++.+++. ++++.+|....+.++.|.+.|+++|-
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p--------~---~l~~~i~~~~~~----g~~v~~~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRP--------V---AVEALLARIHHH----HLLTMADCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCS--------S---CHHHHHHHHHHT----TCEEEEECCSHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccCCH--------H---HHHHHHHHHHHC----CCEEEEeCCCHHHHHHHHhCCCCEEEE
Confidence 345677889999999988632 133 1 133345555654 78999999999999999999999992
Q ss_pred -cC--CCC----CCCchHHHHHHhcCCCEEE
Q 038230 315 -DV--SAG----QLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 315 -dV--sg~----~~d~~m~~l~~~~~~~vVl 338 (480)
-. +.. .-+-++++-+++.++++|.
T Consensus 156 ~~~g~t~~~~~~~~~~~~i~~l~~~~ipvIA 186 (232)
T 3igs_A 156 TMSGYTTPDTPEEPDLPLVKALHDAGCRVIA 186 (232)
T ss_dssp TTTTSSSSSCCSSCCHHHHHHHHHTTCCEEE
T ss_pred cCccCCCCCCCCCCCHHHHHHHHhcCCcEEE
Confidence 11 111 1122445555555777775
No 81
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=93.43 E-value=1.5 Score=42.47 Aligned_cols=173 Identities=14% Similarity=0.219 Sum_probs=106.9
Q ss_pred ccccccccCCCCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHH
Q 038230 198 LPIGNLLWDWSLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPV 277 (480)
Q Consensus 198 ~~~~~~~~~~~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~v 277 (480)
..+++..++- .+|+|...| |+ .+.+++++.+++..+.|||++.+=...-. ..+. .+.+...
T Consensus 8 ~~v~~~~~g~-~~p~Icv~l--~~---------~~~~e~~~~~~~~~~~~~D~vElRvD~l~----~~~~---~~~v~~~ 68 (257)
T 2yr1_A 8 IKVRNIWIGG-TEPCICAPV--VG---------EDDRKVLREAEEVCRKQPDLLEWRADFFR----AIDD---QERVLAT 68 (257)
T ss_dssp EEETTEEESS-SSCEEEEEE--CC---------SSHHHHHHHHHHHHHSCCSEEEEEGGGCT----TTTC---HHHHHHH
T ss_pred EEEeeeeeCC-CCcEEEEEe--cC---------CCHHHHHHHHHHHhhcCCCEEEEEeeccc----ccCc---HHHHHHH
Confidence 4455555543 467775544 43 47899999999999999999999764321 1111 3344455
Q ss_pred HHHHHcCCcCCCCeEEE--eC-------------CCHHHHHHHHHcC-CCEEecCCCCCCC--chHHHHHHhcCCCEEEE
Q 038230 278 LEAVLTMPEMEGKLVSV--DT-------------FYSKVASEAVGKG-AHIVNDVSAGQLD--PDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 278 i~~l~~~~~~~~~pISI--DT-------------~~~~v~~aaL~~G-~~iINdVsg~~~d--~~m~~l~~~~~~~vVlm 339 (480)
+..|++.. .++|+-+ =| .+-+.++.|++.| +++|- |--...+ .++.+.+++.++.+|+.
T Consensus 69 l~~lr~~~--~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iD-vEl~~~~~~~~l~~~~~~~~~kvI~S 145 (257)
T 2yr1_A 69 ANGLRNIA--GEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVD-YELAYGERIADVRRMTEECSVWLVVS 145 (257)
T ss_dssp HHHHHHHS--SSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEE-EEGGGTTHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHhc--cCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCCCEEE-EECCCChhHHHHHHHHHhCCCEEEEE
Confidence 55556532 1345432 21 1335788888888 88884 5432211 24566667889999986
Q ss_pred -cC-CCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc----ccCCCcE
Q 038230 340 -HM-RGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL----AASHAPI 413 (480)
Q Consensus 340 -h~-~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l----~~~g~Pi 413 (480)
|+ .++|. .+.+.++++++.+.|-+-=+|.. .+++.++++.+++-. .....|+
T Consensus 146 ~Hdf~~tP~-----------------~~el~~~~~~~~~~gaDivKia~-----~a~s~~D~l~ll~~~~~~~~~~~~P~ 203 (257)
T 2yr1_A 146 RHYFDGTPR-----------------KETLLADMRQAERYGADIAKVAV-----MPKSPEDVLVLLQATEEARRELAIPL 203 (257)
T ss_dssp EEESSCCCC-----------------HHHHHHHHHHHHHTTCSEEEEEE-----CCSSHHHHHHHHHHHHHHHHHCSSCE
T ss_pred ecCCCCCcC-----------------HHHHHHHHHHHHhcCCCEEEEEe-----ccCCHHHHHHHHHHHHHHhccCCCCE
Confidence 43 45553 14456788888999965335554 347788888887643 2356785
Q ss_pred E
Q 038230 414 L 414 (480)
Q Consensus 414 l 414 (480)
+
T Consensus 204 I 204 (257)
T 2yr1_A 204 I 204 (257)
T ss_dssp E
T ss_pred E
Confidence 3
No 82
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=93.34 E-value=0.49 Score=45.68 Aligned_cols=99 Identities=13% Similarity=0.071 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHcCCC--EEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCH-HHHHHHHHcC
Q 038230 235 AAVSQVRLMISEGAD--MIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYS-KVASEAVGKG 309 (480)
Q Consensus 235 ~a~~~A~~~v~~GAd--iIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~-~v~~aaL~~G 309 (480)
..-+..+.+.+.||| -+||.=...-|+-.. .+ ++++.|++.. .+.|+-++ ..+| .-++.+.++|
T Consensus 41 ~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~-G~--------~~v~~lr~~~--p~~~ldvHLmv~~p~~~i~~~~~aG 109 (246)
T 3inp_A 41 RLGDDVKAVLAAGADNIHFDVMDNHYVPNLTF-GP--------MVLKALRDYG--ITAGMDVHLMVKPVDALIESFAKAG 109 (246)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCC-CH--------HHHHHHHHHT--CCSCEEEEEECSSCHHHHHHHHHHT
T ss_pred hHHHHHHHHHHcCCCEEEEEecCCCcCcchhc-CH--------HHHHHHHHhC--CCCeEEEEEeeCCHHHHHHHHHHcC
Confidence 344556666779998 667764333344221 11 4566666541 14554443 2333 3577888899
Q ss_pred CCEEecCCCCCCC--chHHHHHHhcCCCEEEEcCCCCC
Q 038230 310 AHIVNDVSAGQLD--PDMYKVVAGLKVPYVAMHMRGDP 345 (480)
Q Consensus 310 ~~iINdVsg~~~d--~~m~~l~~~~~~~vVlmh~~g~p 345 (480)
+++|. +-.+..+ .+.++.++++|+.+.+.-+.++|
T Consensus 110 Ad~it-vH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp 146 (246)
T 3inp_A 110 ATSIV-FHPEASEHIDRSLQLIKSFGIQAGLALNPATG 146 (246)
T ss_dssp CSEEE-ECGGGCSCHHHHHHHHHTTTSEEEEEECTTCC
T ss_pred CCEEE-EccccchhHHHHHHHHHHcCCeEEEEecCCCC
Confidence 99997 4443212 46888899999877665433344
No 83
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=93.13 E-value=1.1 Score=43.84 Aligned_cols=156 Identities=15% Similarity=0.208 Sum_probs=87.9
Q ss_pred HHHHHHcCCCEEEeCCCC-----CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC-----H-HHH---HHH
Q 038230 240 VRLMISEGADMIDIGAQS-----TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY-----S-KVA---SEA 305 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~eS-----trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~-----~-~v~---~aa 305 (480)
|+-.-++|.|+|=+|... ..|...+++-+|-+.. .+.+.+-. ...||+.|-.. + +++ .+.
T Consensus 42 A~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h----~~aV~r~~--~~~~vvaD~pfgsY~s~~~a~~~a~rl 115 (275)
T 3vav_A 42 AALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYH----TACVARAQ--PRALIVADLPFGTYGTPADAFASAVKL 115 (275)
T ss_dssp HHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHH----HHHHHHTC--CSSEEEEECCTTSCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHH----HHHHHhcC--CCCCEEEecCCCCCCCHHHHHHHHHHH
Confidence 344567999999888311 2455557775444443 45555432 24788887543 2 233 344
Q ss_pred HHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 038230 306 VGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRII 385 (480)
Q Consensus 306 L~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Ii 385 (480)
+++|++.|| +-+...-.+.++.+.+.|++++. |...+|++......+.-..-.++..+.+.++...++++|-. .|
T Consensus 116 ~kaGa~aVk-lEdg~~~~~~i~~l~~~GIpv~g-HlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~---~i 190 (275)
T 3vav_A 116 MRAGAQMVK-FEGGEWLAETVRFLVERAVPVCA-HVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQ---LI 190 (275)
T ss_dssp HHTTCSEEE-EECCGGGHHHHHHHHHTTCCEEE-EEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHTCS---EE
T ss_pred HHcCCCEEE-ECCchhHHHHHHHHHHCCCCEEE-ecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCC---EE
Confidence 567999999 65543224556666778999997 76666765422111100000012234555777777899995 66
Q ss_pred EecCCCCccChhHHHHHHHhc-ccCCCcEE
Q 038230 386 IDPGLGFSKKAEHNLDILLGL-AASHAPIL 414 (480)
Q Consensus 386 lDPgiGf~k~~~~~~~~lr~l-~~~g~Pil 414 (480)
+=+++ .+ . +++++ +.+.+|++
T Consensus 191 vlE~v---p~-~----~a~~It~~l~iP~i 212 (275)
T 3vav_A 191 VLEAV---PT-L----VAAEVTRELSIPTI 212 (275)
T ss_dssp EEESC---CH-H----HHHHHHHHCSSCEE
T ss_pred EecCC---CH-H----HHHHHHHhCCCCEE
Confidence 65665 11 1 34444 34678875
No 84
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=92.92 E-value=3.5 Score=45.65 Aligned_cols=184 Identities=15% Similarity=0.090 Sum_probs=108.0
Q ss_pred CCHHHHHHHHHHHHHcCCCE--EEeCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE-Ee-C----
Q 038230 231 QSVEAAVSQVRLMISEGADM--IDIGAQST------RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS-VD-T---- 296 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdi--IDIG~eSt------rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS-ID-T---- 296 (480)
++.++.++.|+.+.+.|+++ |++||.+| .++ +.+|+++..+.+.+. +.++. +. .
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~------e~p~e~l~~l~~~~~------~~~l~~l~R~~n~v 189 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLY------ECPWRRLQELRELIP------NIPFQMLLRGANAV 189 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSC------CCHHHHHHHHHHHCS------SSCEEEEECGGGTT
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCC------CCHHHHHHHHHHHcc------cchHHHHhcccccc
Confidence 68899999999999998888 99997666 222 245777766665553 23344 22 1
Q ss_pred ----CC----HHHHHHHHHcCCCEEecCCCCCCC---chHHHHHHhcCCCEE--EEcCC--CCCCccccccccchhhHHH
Q 038230 297 ----FY----SKVASEAVGKGAHIVNDVSAGQLD---PDMYKVVAGLKVPYV--AMHMR--GDPSTMQNEENLQYDDVCK 361 (480)
Q Consensus 297 ----~~----~~v~~aaL~~G~~iINdVsg~~~d---~~m~~l~~~~~~~vV--lmh~~--g~p~~~~~~~~~~~~~v~~ 361 (480)
+- .+-+++|+++|+++|.=..+.+.- ....+.+++.|..+. +++.. +.|.. .. | +
T Consensus 190 gy~~~p~~~~~~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r----~~--~-~--- 259 (718)
T 3bg3_A 190 GYTNYPDNVVFKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSR----TK--Y-S--- 259 (718)
T ss_dssp SSSCCCHHHHHHHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTC----CT--T-C---
T ss_pred cccccCCcchHHHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCC----CC--C-C---
Confidence 11 355678888999987644444321 335566777775544 45552 23321 00 0 1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCEEE-ecCCCCccChhHHHHHHHhcc-c-CCCcEEEeeccccccccccCCCCcCcccHH
Q 038230 362 QVASELYSKVRDAELSGIPAWRIII-DPGLGFSKKAEHNLDILLGLA-A-SHAPILIGPSRKRFLGEICNRPSADERDPA 438 (480)
Q Consensus 362 ev~~~l~~~i~~a~~~Gi~~~~Iil-DPgiGf~k~~~~~~~~lr~l~-~-~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~ 438 (480)
.+++.+.++.+.++|.. .|.| |- .|... +.+..++++.++ . ++.|+=+ |. .+-.+.
T Consensus 260 --~e~~~~~a~~l~~~Ga~--~I~l~DT-~G~~~-P~~v~~lV~~lk~~~p~~~I~~-H~--------------Hnd~Gl 318 (718)
T 3bg3_A 260 --LQYYMGLAEELVRAGTH--ILCIKDM-AGLLK-PTACTMLVSSLRDRFPDLPLHI-HT--------------HDTSGA 318 (718)
T ss_dssp --HHHHHHHHHHHHHHTCS--EEEEECT-TSCCC-HHHHHHHHHHHHHHSTTCCEEE-EC--------------CCTTSC
T ss_pred --HHHHHHHHHHHHHcCCC--EEEEcCc-CCCcC-HHHHHHHHHHHHHhCCCCeEEE-EE--------------CCCccH
Confidence 15677888888899985 4433 43 34433 344456666662 3 3566532 11 111223
Q ss_pred HHHHHHHHHHcCCcEEEcC
Q 038230 439 TIASITAGVLGGANIVRVH 457 (480)
Q Consensus 439 t~a~~~~a~~~Ga~IlRvH 457 (480)
..|-+..|++.||+++.+.
T Consensus 319 AvANslaAveAGa~~VD~t 337 (718)
T 3bg3_A 319 GVAAMLACAQAGADVVDVA 337 (718)
T ss_dssp HHHHHHHHHHTTCSEEEEB
T ss_pred HHHHHHHHHHhCCCEEEec
Confidence 3444567788898888754
No 85
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=92.85 E-value=1.9 Score=40.56 Aligned_cols=143 Identities=13% Similarity=0.099 Sum_probs=92.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-----------eCCCH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-----------DTFYS 299 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-----------DT~~~ 299 (480)
.+.+++++.++.. |||++.+=..--. ..+. +.+..++..+++. ++|+-+ +..+-
T Consensus 10 ~~~~~~~~~~~~~---~~D~vElRvD~l~----~~~~----~~v~~~~~~lr~~----~~PiI~T~R~~~eGG~~~~~~~ 74 (219)
T 2egz_A 10 TNFSENLKKAKEK---GADIVELRVDQFS----DTSL----NYVKEKLEEVHSQ----GLKTILTIRSPEEGGREVKNRE 74 (219)
T ss_dssp TTHHHHHHHHHHH---TCSEEEEEGGGCS----CCCH----HHHHHHHHHHHHT----TCEEEEECCCGGGTCCCCTTHH
T ss_pred CCHHHHHHHHHHc---CCCEEEEEecccc----ccCH----HHHHHHHHHHHhc----CCcEEEEEeehhccCCCHHHHH
Confidence 4678888888773 9999999764321 1221 3444556666653 356533 34455
Q ss_pred HHHHHHHHcCCCEEecCCCCCC--CchHHHHHHhcCCCEEEE-cC-CCCCCccccccccchhhHHHHHHHHHHHHHHHHH
Q 038230 300 KVASEAVGKGAHIVNDVSAGQL--DPDMYKVVAGLKVPYVAM-HM-RGDPSTMQNEENLQYDDVCKQVASELYSKVRDAE 375 (480)
Q Consensus 300 ~v~~aaL~~G~~iINdVsg~~~--d~~m~~l~~~~~~~vVlm-h~-~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~ 375 (480)
+.++.+++. +++| ||.-... .+.+.+.+++.|+.+|+. |+ .++|. .+.+.++++++.
T Consensus 75 ~ll~~~~~~-~d~i-DvEl~~~~~~~~l~~~~~~~g~kvI~S~Hdf~~tp~-----------------~~el~~~~~~~~ 135 (219)
T 2egz_A 75 ELFEELSPL-SDYT-DIELSSRGLLVKLYNITKEAGKKLIISYHNFELTPP-----------------NWIIREVLREGY 135 (219)
T ss_dssp HHHHHHTTT-SSEE-EEETTCHHHHHHHHHHHHHTTCEEEEEEEESSCCCC-----------------HHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCEE-EEEccCCccHHHHHHHHHHcCCEEEEEecCCCCCcC-----------------HHHHHHHHHHHH
Confidence 788888888 8888 5654331 146788888999998876 43 45553 144567788888
Q ss_pred HCCCCCCCEEEecCCCCccChhHHHHHHHhcccCCCcE
Q 038230 376 LSGIPAWRIIIDPGLGFSKKAEHNLDILLGLAASHAPI 413 (480)
Q Consensus 376 ~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l~~~g~Pi 413 (480)
+.|- -=+|..= +++.++++.+++-.+....|+
T Consensus 136 ~~ga-ivKia~~-----a~~~~D~l~ll~~~~~~~~P~ 167 (219)
T 2egz_A 136 RYGG-IPKIAVK-----ANSYEDVARLLCISRQVEGEK 167 (219)
T ss_dssp HTTS-EEEEEEE-----CSSHHHHHHHHHHHTTSCSCB
T ss_pred HcCC-EEEEEEc-----cCCHHHHHHHHHHHHhCCCCE
Confidence 8882 2266554 478889988887543446674
No 86
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=92.75 E-value=1.5 Score=41.56 Aligned_cols=131 Identities=13% Similarity=0.220 Sum_probs=84.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC-CCHHHHHHHHHcCC
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT-FYSKVASEAVGKGA 310 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT-~~~~v~~aaL~~G~ 310 (480)
+.+++++.++.+++.|+++|-+..-+ |. ..| .++.+++.+ .++.+..+| ...+-++.|+++|+
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~k~--~~------~~~------~i~~l~~~~--~~~~igagtvl~~d~~~~A~~aGA 99 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTLRS--QH------GLK------AIQVLREQR--PELCVGAGTVLDRSMFAAVEAAGA 99 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEESSS--TH------HHH------HHHHHHHHC--TTSEEEEECCCSHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCC--cc------HHH------HHHHHHHhC--cccEEeeCeEeeHHHHHHHHHCCC
Confidence 45678999999999999999998421 11 111 234344332 245554444 45689999999999
Q ss_pred CEEecCCCCCCCchHHHHHHhcCCCEEE-EcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecC
Q 038230 311 HIVNDVSAGQLDPDMYKVVAGLKVPYVA-MHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPG 389 (480)
Q Consensus 311 ~iINdVsg~~~d~~m~~l~~~~~~~vVl-mh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg 389 (480)
+.+ +++. .++++.+.++++|.+++. .++ | +.+..|.++|.+ =|=+
T Consensus 100 d~v--~~p~-~d~~v~~~~~~~g~~~i~G~~t---~-----------------------~e~~~A~~~Gad--~vk~--- 145 (225)
T 1mxs_A 100 QFV--VTPG-ITEDILEAGVDSEIPLLPGIST---P-----------------------SEIMMGYALGYR--RFKL--- 145 (225)
T ss_dssp SSE--ECSS-CCHHHHHHHHHCSSCEECEECS---H-----------------------HHHHHHHTTTCC--EEEE---
T ss_pred CEE--EeCC-CCHHHHHHHHHhCCCEEEeeCC---H-----------------------HHHHHHHHCCCC--EEEE---
Confidence 999 4554 489999999999988874 221 1 234556788986 2334
Q ss_pred CCCccChhHHHHHHHhcc--cCCCcEE
Q 038230 390 LGFSKKAEHNLDILLGLA--ASHAPIL 414 (480)
Q Consensus 390 iGf~k~~~~~~~~lr~l~--~~g~Pil 414 (480)
|........+.|+.++ .+++|++
T Consensus 146 --FPa~~~~G~~~lk~i~~~~~~ipvv 170 (225)
T 1mxs_A 146 --FPAEISGGVAAIKAFGGPFGDIRFC 170 (225)
T ss_dssp --TTHHHHTHHHHHHHHHTTTTTCEEE
T ss_pred --ccCccccCHHHHHHHHhhCCCCeEE
Confidence 4421111356677663 3478875
No 87
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=92.47 E-value=1.7 Score=42.57 Aligned_cols=106 Identities=20% Similarity=0.244 Sum_probs=71.9
Q ss_pred cC-CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE----eCCC------
Q 038230 230 FQ-SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV----DTFY------ 298 (480)
Q Consensus 230 ~~-~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI----DT~~------ 298 (480)
|. +++.+.+.++++++.||.-+=|=.+...++...++.++-.+++.-++++-... ++|+-| |++-
T Consensus 87 yg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~----g~~~~i~aRtda~~~~~g~~ 162 (275)
T 2ze3_A 87 YGHAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDAS----GVPVFLNARTDTFLKGHGAT 162 (275)
T ss_dssp SSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHH----TSCCEEEEECCTTTTTCSSS
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhc----CCCeEEEEechhhhcccccc
Confidence 54 78999999999999999999886554346667888877777776666554432 344444 5532
Q ss_pred H-HHHHHHHH-------cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEc
Q 038230 299 S-KVASEAVG-------KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMH 340 (480)
Q Consensus 299 ~-~v~~aaL~-------~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh 340 (480)
+ +-++++++ +||++|- +-+....+.+..++++.+.|+.++.
T Consensus 163 ~~~~~~~ai~Ra~ay~eAGAd~i~-~e~~~~~~~~~~i~~~~~~P~n~~~ 211 (275)
T 2ze3_A 163 DEERLAETVRRGQAYADAGADGIF-VPLALQSQDIRALADALRVPLNVMA 211 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEE-CTTCCCHHHHHHHHHHCSSCEEEEC
T ss_pred chhhHHHHHHHHHHHHHCCCCEEE-ECCCCCHHHHHHHHHhcCCCEEEec
Confidence 1 22344433 5999997 4444312678888888999987664
No 88
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=92.24 E-value=1.5 Score=43.53 Aligned_cols=136 Identities=16% Similarity=0.208 Sum_probs=88.0
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeE--EEeCCCHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQST------RPMATKISAEKELERLIPVLEAVLTMPEMEGKLV--SVDTFYSKV 301 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eSt------rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pI--SIDT~~~~v 301 (480)
|.+++.+.+.++++++.||.-+=|=.+.. .++...++.+|-.+|+.-++++-.. .+..| =.|++-.+-
T Consensus 94 yg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~----~~~~I~ARTDa~~~~g 169 (298)
T 3eoo_A 94 WGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTD----ETFVIMARTDAAAAEG 169 (298)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSS----TTSEEEEEECTHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccC----CCeEEEEeehhhhhcC
Confidence 34788899999999999999988866542 2345577887778887666554321 24333 347775554
Q ss_pred HHHHHH-------cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcC-CCCCCccccccccchhhHHHHHHHHHHHHHHH
Q 038230 302 ASEAVG-------KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHM-RGDPSTMQNEENLQYDDVCKQVASELYSKVRD 373 (480)
Q Consensus 302 ~~aaL~-------~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~-~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~ 373 (480)
+++|++ +|||+|- +.+....+++..+++..+.|+++... .|.+.. + ..+.
T Consensus 170 ldeai~Ra~ay~~AGAD~if-~~~~~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~------~---------------~~~e 227 (298)
T 3eoo_A 170 IDAAIERAIAYVEAGADMIF-PEAMKTLDDYRRFKEAVKVPILANLTEFGSTPL------F---------------TLDE 227 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEEE-ECCCCSHHHHHHHHHHHCSCBEEECCTTSSSCC------C---------------CHHH
T ss_pred HHHHHHHHHhhHhcCCCEEE-eCCCCCHHHHHHHHHHcCCCeEEEeccCCCCCC------C---------------CHHH
Confidence 444443 5999997 55554337788899999999876443 222111 0 0234
Q ss_pred HHHCCCCCCCEEEecCCCCcc
Q 038230 374 AELSGIPAWRIIIDPGLGFSK 394 (480)
Q Consensus 374 a~~~Gi~~~~IilDPgiGf~k 394 (480)
+.+.|+. +++=|...|-.
T Consensus 228 L~~lGv~---~v~~~~~~~ra 245 (298)
T 3eoo_A 228 LKGANVD---IALYCCGAYRA 245 (298)
T ss_dssp HHHTTCC---EEEECSHHHHH
T ss_pred HHHcCCe---EEEEchHHHHH
Confidence 5689995 77777666533
No 89
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=91.91 E-value=2.7 Score=40.93 Aligned_cols=195 Identities=15% Similarity=0.108 Sum_probs=107.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCC---------CCCCCC-CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGA---------QSTRPM-ATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSK 300 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~---------eStrP~-a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~ 300 (480)
-|.+.+++.|+++.+.|+++-+++. .-|.|+ ......++-++.+ ..+.+. .++|+.-+-+++.
T Consensus 14 e~~~~~~~~A~~l~~~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~l----~~~~~e---~Glp~~te~~d~~ 86 (267)
T 2nwr_A 14 ESEELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSIHSFRGHGLEYGVKAL----RKVKEE---FGLKITTDIHESW 86 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHHCTTEEEEEECBSCCTTCSSTTSCCCSCHHHHHHHH----HHHHHH---HCCEEEEECSSGG
T ss_pred CCHHHHHHHHHHHHHHHHhhcCccEEEeeccccCCCCCCCCCcCccHHHHHHHH----HHHHHh---cCCeEEEecCCHH
Confidence 4789999999999999877633441 233444 2233334445443 333333 3899999999999
Q ss_pred HHHHHHHcCCCEEecCCCCC-CCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCC
Q 038230 301 VASEAVGKGAHIVNDVSAGQ-LDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGI 379 (480)
Q Consensus 301 v~~aaL~~G~~iINdVsg~~-~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi 379 (480)
.++...+ .+|++- |.+.. ..-+++.-+++.+.||++-. |+-.++++ ....++.+...|-
T Consensus 87 ~~~~l~~-~vd~~~-IgA~~~rn~~ll~~~a~~~~PV~lK~--G~~~t~~e----------------~~~Av~~i~~~GN 146 (267)
T 2nwr_A 87 QAEPVAE-VADIIQ-IPAFLCRQTDLLLAAAKTGRAVNVKK--GQFLAPWD----------------TKNVVEKLKFGGA 146 (267)
T ss_dssp GHHHHHT-TCSEEE-ECGGGTTCHHHHHHHHTTTSEEEEEC--CTTCCGGG----------------GHHHHHHHHHTTC
T ss_pred hHHHHHh-cCCEEE-ECcccccCHHHHHHHHcCCCcEEEeC--CCCCCHHH----------------HHHHHHHHHHcCC
Confidence 9998877 688875 44322 23458888889999998843 22222211 1234566778887
Q ss_pred CCCCE-EEecCCCCccCh-hHHHHHHHhcccCCCcEEEeecccccc-ccccCCCCcCcccHHHHHHHHHHHHcCCc--EE
Q 038230 380 PAWRI-IIDPGLGFSKKA-EHNLDILLGLAASHAPILIGPSRKRFL-GEICNRPSADERDPATIASITAGVLGGAN--IV 454 (480)
Q Consensus 380 ~~~~I-ilDPgiGf~k~~-~~~~~~lr~l~~~g~Pil~G~SrKsfi-~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~--Il 454 (480)
+ ++ ++-=|..|..+. .-++..+..++..+ |+++=.|.--.. +-..+.. ..+|.... .++..|+..|++ ++
T Consensus 147 ~--~i~L~~rG~~~~y~~~~~dl~~i~~lk~~~-pVivD~sH~~q~p~G~s~hs-~g~~~~~~-~ia~aava~Ga~G~mI 221 (267)
T 2nwr_A 147 K--EIYLTERGTTFGYNNLVVDFRSLPIMKQWA-KVIYDATHSVQLPGGLGDKS-GGMREFIF-PLIRAAVAVGCDGVFM 221 (267)
T ss_dssp S--SEEEEECCEECSSSCEECCTTHHHHHTTTS-EEEEETTGGGCCTTC-------CCGGGHH-HHHHHHHHHCCSEEEE
T ss_pred C--eEEEEECCCCCCCCccccCHHHHHHHHHcC-CEEEcCCcccccCCCcCcCC-CCchhHHH-HHHHHHHHcCCCEEEE
Confidence 6 44 455555442211 11233333333346 998843322000 0000000 11233322 223345578995 89
Q ss_pred EcC
Q 038230 455 RVH 457 (480)
Q Consensus 455 RvH 457 (480)
-+|
T Consensus 222 E~H 224 (267)
T 2nwr_A 222 ETH 224 (267)
T ss_dssp EEE
T ss_pred Eec
Confidence 899
No 90
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=91.89 E-value=0.89 Score=43.47 Aligned_cols=150 Identities=11% Similarity=0.163 Sum_probs=92.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--------------C
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--------------F 297 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--------------~ 297 (480)
+.+++++.+++..+.|||++.+=...-. ..+ .+.+...++.+++.. .++||-+-- .
T Consensus 15 ~~~e~~~~~~~~~~~~~D~vElRvD~l~----~~~----~~~v~~~~~~lr~~~--~~~PiI~T~R~~~eGG~~~~~~~~ 84 (238)
T 1sfl_A 15 SIEETLIQKINHRIDAIDVLELRIDQFE----NVT----VDQVAEMITKLKVMQ--DSFKLLVTYRTKLQGGYGQFTNDS 84 (238)
T ss_dssp ---CHHHHHHHHTTTTCSEEEEECTTST----TCC----HHHHHHHHHHHC-----CCSEEEEECCBGGGTSCBCCCHHH
T ss_pred CHHHHHHHHHHhhhcCCCEEEEEecccc----cCC----HHHHHHHHHHHHHhc--cCCCEEEEeeccccCCCCCCCHHH
Confidence 4578899999999999999999764321 122 455666677777652 156764321 2
Q ss_pred CHHHHHHHHHc-CCCEEecCCCCC--CC---chHHHHHHhcCCCEEEE-cC-CCCCCccccccccchhhHHHHHHHHHHH
Q 038230 298 YSKVASEAVGK-GAHIVNDVSAGQ--LD---PDMYKVVAGLKVPYVAM-HM-RGDPSTMQNEENLQYDDVCKQVASELYS 369 (480)
Q Consensus 298 ~~~v~~aaL~~-G~~iINdVsg~~--~d---~~m~~l~~~~~~~vVlm-h~-~g~p~~~~~~~~~~~~~v~~ev~~~l~~ 369 (480)
+-+.++.+++. |+++| ||--.. .+ .++.+.+.+.++.+|+. |+ .++|. .+.+.+
T Consensus 85 ~~~ll~~~~~~~~~d~i-DvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~-----------------~~el~~ 146 (238)
T 1sfl_A 85 YLNLISDLANINGIDMI-DIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPP-----------------LDELQF 146 (238)
T ss_dssp HHHHHHHGGGCTTCCEE-EEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCC-----------------HHHHHH
T ss_pred HHHHHHHHHHhCCCCEE-EEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcC-----------------HHHHHH
Confidence 33567888887 58887 465432 22 23556667789999986 43 45553 145567
Q ss_pred HHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc----ccCCCcEE
Q 038230 370 KVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL----AASHAPIL 414 (480)
Q Consensus 370 ~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l----~~~g~Pil 414 (480)
+++++.+.|-+-=+|.. .+++..+++.+++-. .....|++
T Consensus 147 ~~~~~~~~gaDivKia~-----~a~~~~D~l~ll~~~~~~~~~~~~P~I 190 (238)
T 1sfl_A 147 IFFKMQKFNPEYVKLAV-----MPHNKNDVLNLLQAMSTFSDTMDCKVV 190 (238)
T ss_dssp HHHHHHTTCCSEEEEEE-----CCSSHHHHHHHHHHHHHHHHHCSSEEE
T ss_pred HHHHHHHcCCCEEEEEe-----cCCCHHHHHHHHHHHHHHhhcCCCCEE
Confidence 88888888865335554 357788888887643 22567853
No 91
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=91.85 E-value=2.5 Score=39.28 Aligned_cols=84 Identities=29% Similarity=0.422 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC-CHHHHHHHHHcCCCE
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF-YSKVASEAVGKGAHI 312 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~-~~~v~~aaL~~G~~i 312 (480)
+++++.++.+++.|+++|-+..-+ | ... ..++.+++ . ++.+..+|. ..+-++.|+++|++.
T Consensus 25 ~~~~~~~~~l~~gGv~~iel~~k~--~--------~~~----~~i~~~~~-~---~~~~gag~vl~~d~~~~A~~~GAd~ 86 (207)
T 2yw3_A 25 EDLLGLARVLEEEGVGALEITLRT--E--------KGL----EALKALRK-S---GLLLGAGTVRSPKEAEAALEAGAAF 86 (207)
T ss_dssp CCHHHHHHHHHHTTCCEEEEECSS--T--------HHH----HHHHHHTT-S---SCEEEEESCCSHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC--h--------HHH----HHHHHHhC-C---CCEEEeCeEeeHHHHHHHHHcCCCE
Confidence 457889999999999999998421 1 111 12333443 2 455555553 678999999999999
Q ss_pred EecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 313 VNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 313 INdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+ +++. .+.++.+.++++|.+++.
T Consensus 87 v--~~~~-~d~~v~~~~~~~g~~~i~ 109 (207)
T 2yw3_A 87 L--VSPG-LLEEVAALAQARGVPYLP 109 (207)
T ss_dssp E--EESS-CCHHHHHHHHHHTCCEEE
T ss_pred E--EcCC-CCHHHHHHHHHhCCCEEe
Confidence 9 4553 478899999999998875
No 92
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=91.72 E-value=1.9 Score=42.88 Aligned_cols=136 Identities=17% Similarity=0.170 Sum_probs=84.6
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCC------CCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeE--EEeCCCH--
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTR------PMATKISAEKELERLIPVLEAVLTMPEMEGKLV--SVDTFYS-- 299 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStr------P~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pI--SIDT~~~-- 299 (480)
|.+++.+.+.++++++.||.-+=|=.+... ++...++.+|-.+|+.-+.++-.+.- .++.| =.|++-.
T Consensus 99 yg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~--~d~~I~ARTDa~~~~g 176 (307)
T 3lye_A 99 YGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLR--SDFVLIARTDALQSLG 176 (307)
T ss_dssp SSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTT--CCCEEEEEECCHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC--CCeEEEEechhhhccC
Confidence 345788999999999999999988765421 23457787777888877776654321 13333 3466544
Q ss_pred --HHHHHH---HHcCCCEEecCCCCCCCchHHHHHHhcC-CCEEEE-cCCC-CCCccccccccchhhHHHHHHHHHHHHH
Q 038230 300 --KVASEA---VGKGAHIVNDVSAGQLDPDMYKVVAGLK-VPYVAM-HMRG-DPSTMQNEENLQYDDVCKQVASELYSKV 371 (480)
Q Consensus 300 --~v~~aa---L~~G~~iINdVsg~~~d~~m~~l~~~~~-~~vVlm-h~~g-~p~~~~~~~~~~~~~v~~ev~~~l~~~i 371 (480)
+.++.| .++|||+|- +.+....+++..+++... .|+++. -..| .|.- ..
T Consensus 177 ldeAi~Ra~ay~eAGAD~if-i~~~~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~----------------------t~ 233 (307)
T 3lye_A 177 YEECIERLRAARDEGADVGL-LEGFRSKEQAAAAVAALAPWPLLLNSVENGHSPLI----------------------TV 233 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEEE-ECCCSCHHHHHHHHHHHTTSCBEEEEETTSSSCCC----------------------CH
T ss_pred HHHHHHHHHHHHHCCCCEEE-ecCCCCHHHHHHHHHHccCCceeEEeecCCCCCCC----------------------CH
Confidence 344444 335999997 555542367788888775 888652 2222 3310 02
Q ss_pred HHHHHCCCCCCCEEEecCCCCc
Q 038230 372 RDAELSGIPAWRIIIDPGLGFS 393 (480)
Q Consensus 372 ~~a~~~Gi~~~~IilDPgiGf~ 393 (480)
+.+.+.|+ ++++=|...+.
T Consensus 234 ~eL~~lGv---~~v~~~~~~~r 252 (307)
T 3lye_A 234 EEAKAMGF---RIMIFSFATLA 252 (307)
T ss_dssp HHHHHHTC---SEEEEETTTHH
T ss_pred HHHHHcCC---eEEEEChHHHH
Confidence 34467899 58888877663
No 93
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=91.57 E-value=3.1 Score=41.00 Aligned_cols=114 Identities=18% Similarity=0.230 Sum_probs=69.6
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEeCC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISIDT~ 297 (480)
+|| |-+.|. .|.+...+.++.++++|+|-|-++| ||.-+ ...+. +|..++...+ +..... ..+.+.+=+.
T Consensus 21 vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~gl~v~G-tTGE~-~~Ls~-eEr~~v~~~~~~~~~gr---vpViaGvg~~ 91 (301)
T 1xky_A 21 VTP--FDINGN-IDFAKTTKLVNYLIDNGTTAIVVGG-TTGES-PTLTS-EEKVALYRHVVSVVDKR---VPVIAGTGSN 91 (301)
T ss_dssp CCC--BCTTSS-BCHHHHHHHHHHHHHTTCCEEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHHTTS---SCEEEECCCS
T ss_pred ECc--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccCh-hhCCH-HHHHHHHHHHHHHhCCC---ceEEeCCCCC
Confidence 688 765554 6899999999999999999999987 44433 23554 5555555544 343322 1333444443
Q ss_pred C-HHH---HHHHHHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEcC
Q 038230 298 Y-SKV---ASEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 298 ~-~~v---~~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh~ 341 (480)
+ .++ ++.|-+.|+|-+--+...-. +++++ .++...+.|+++-+.
T Consensus 92 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 146 (301)
T 1xky_A 92 NTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNV 146 (301)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 3 333 33445569997766654211 13333 455567899998664
No 94
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=91.57 E-value=1.6 Score=43.88 Aligned_cols=136 Identities=18% Similarity=0.283 Sum_probs=82.4
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHc
Q 038230 229 KFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGK 308 (480)
Q Consensus 229 ~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~ 308 (480)
+..+.+++++.++++.+.|+.-|-+|+..+.|.. . ..+++..+++.+++.. ..+-++..+..++.++.-.++
T Consensus 97 ~~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~--~----~~~~l~~ll~~ik~~g--~~i~~t~G~l~~e~l~~L~~a 168 (369)
T 1r30_A 97 RLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHE--R----DMPYLEQMVQGVKAMG--LEACMTLGTLSESQAQRLANA 168 (369)
T ss_dssp CCCCHHHHHHHHHHHHHTTCSEEEEEECCSSCCT--T----THHHHHHHHHHHHHTT--SEEEEECSSCCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCc--C----CHHHHHHHHHHHHHcC--CeEEEecCCCCHHHHHHHHHC
Confidence 3478999999999999999999888763323321 1 2456666777777641 123356677788888888888
Q ss_pred CCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEec
Q 038230 309 GAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDP 388 (480)
Q Consensus 309 G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDP 388 (480)
|++.++ ++-.. +++.++.+.. ..+ + +...+.++.+.++|+. +-++-
T Consensus 169 Gvd~v~-i~les-~~e~~~~i~~-------------~~~--------~--------~~~l~~i~~a~~~Gi~---v~~~~ 214 (369)
T 1r30_A 169 GLDYYN-HNLDT-SPEFYGNIIT-------------TRT--------Y--------QERLDTLEKVRDAGIK---VCSGG 214 (369)
T ss_dssp CCCEEE-CCCBS-CHHHHHHHCC-------------SSC--------H--------HHHHHHHHHHHHHHCE---EECCE
T ss_pred CCCEEe-ecCcC-CHHHHHHhCC-------------CCC--------H--------HHHHHHHHHHHHcCCe---eeeee
Confidence 888776 33222 4555433221 001 1 2223556666777873 65555
Q ss_pred CCCCccChhHHHHHHHhc
Q 038230 389 GLGFSKKAEHNLDILLGL 406 (480)
Q Consensus 389 giGf~k~~~~~~~~lr~l 406 (480)
.+|++.+.++-.++++.+
T Consensus 215 I~Gl~et~ed~~~~l~~l 232 (369)
T 1r30_A 215 IVGLGETVKDRAGLLLQL 232 (369)
T ss_dssp EECSSCCHHHHHHHHHHH
T ss_pred EeeCCCCHHHHHHHHHHH
Confidence 456666665555555554
No 95
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=91.54 E-value=2.3 Score=40.62 Aligned_cols=85 Identities=16% Similarity=0.090 Sum_probs=51.2
Q ss_pred HHHHHHHHHHcCCCE--EEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEE
Q 038230 236 AVSQVRLMISEGADM--IDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIV 313 (480)
Q Consensus 236 a~~~A~~~v~~GAdi--IDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iI 313 (480)
..+..+.+.+.|||+ +|+==...-|+...- .++++.|++..+. |+.+.+|- ....++.++++||++|
T Consensus 28 l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G---------~~~v~~lr~~~~~-DvhLMv~~-p~~~i~~~~~aGAd~i 96 (237)
T 3cu2_A 28 LNEEVTTLLENQINVLHFDIADGQFSSLFTVG---------AIGIKYFPTHCFK-DVHLMVRN-QLEVAKAVVANGANLV 96 (237)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC---------THHHHTSCTTSEE-EEEEECSC-HHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHcCCCEEEEEEecCccccchhhh---------HHHHHHHhhhCCC-CeEEEEEC-HHHHHHHHHHcCCCEE
Confidence 344456666899998 566100111332111 1467777776433 78888872 2467888999999995
Q ss_pred ecCCCCCCC--chHHHHHHhc
Q 038230 314 NDVSAGQLD--PDMYKVVAGL 332 (480)
Q Consensus 314 NdVsg~~~d--~~m~~l~~~~ 332 (480)
- |-.+..+ .+.++.++++
T Consensus 97 t-vH~ea~~~~~~~i~~i~~~ 116 (237)
T 3cu2_A 97 T-LQLEQYHDFALTIEWLAKQ 116 (237)
T ss_dssp E-EETTCTTSHHHHHHHHTTC
T ss_pred E-EecCCcccHHHHHHHHHhc
Confidence 4 3333322 4677888888
No 96
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=91.52 E-value=3.1 Score=37.94 Aligned_cols=65 Identities=22% Similarity=0.198 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEe
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iIN 314 (480)
+..+.++.+.+.||++|-+.. |+ .+. ++...+...+..+... .++++.++ +-++.|.++|++.|-
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~----~~---~~~-~~~~~~~~~l~~~~~~---~~v~v~v~----~~~~~a~~~gad~v~ 91 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRI----KN---APT-REMYEIGKTLRQLTRE---YDALFFVD----DRVDVALAVDADGVQ 91 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECC----CS---CCH-HHHHHHHHHHHHHHHH---TTCEEEEE----SCHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHCCCCEEEECC----CC---CCH-HHHHHHHHHHHHHHHH---cCCeEEEc----ChHHHHHHcCCCEEE
Confidence 466778889999999998874 21 122 2222222223333222 27788886 234677888999884
No 97
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=91.18 E-value=1.3 Score=44.37 Aligned_cols=182 Identities=11% Similarity=0.047 Sum_probs=94.2
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCC-----CCHHHHHHHHHHHHHHHHcCCcCCCCeEEE--eCC--C-
Q 038230 229 KFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATK-----ISAEKELERLIPVLEAVLTMPEMEGKLVSV--DTF--Y- 298 (480)
Q Consensus 229 ~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~-----v~~~eE~~rl~~vi~~l~~~~~~~~~pISI--DT~--~- 298 (480)
..++.++.++.++.+.+.|.++|.+|.-+ .|++.. ..+.|.++++.. + .+.+++. ... +
T Consensus 19 ~~~~~~~k~~ia~~L~~aGv~~IEvg~~~-~p~~~f~~~~~~~~~e~l~~i~~----~------~~~~~~~L~r~~~~~~ 87 (320)
T 3dxi_A 19 WDFNSKIVDAYILAMNELPIDYLEVGYRN-KPSKEYMGKFGYTPVSVLKHLRN----I------STKKIAIMLNEKNTTP 87 (320)
T ss_dssp TCCCHHHHHHHHHHHHTTTCCEEEEEECC-SCCSSCCCHHHHCCHHHHHHHHH----H------CCSEEEEEEEGGGCCG
T ss_pred CcCCHHHHHHHHHHHHHhCCCEEEEeccc-CCccccccccccChHHHHHHHhh----c------cCCeEEEEecCCCCCh
Confidence 45788999999999999999999999643 454321 011344443322 2 2445444 332 2
Q ss_pred --HHHHHHHHHcCCCEEecCCCCCCCc---hHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHH
Q 038230 299 --SKVASEAVGKGAHIVNDVSAGQLDP---DMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRD 373 (480)
Q Consensus 299 --~~v~~aaL~~G~~iINdVsg~~~d~---~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~ 373 (480)
-+-+..|.+.|++++.=.+....-+ ++++.++++|..+...-+...|-+..+ .| + ..+..
T Consensus 88 ~dv~~~~~a~~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~----~~----------l-~~~~~ 152 (320)
T 3dxi_A 88 EDLNHLLLPIIGLVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFNVMYMSKWAEMN----GF----------L-SKLKA 152 (320)
T ss_dssp GGHHHHHGGGTTTCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEEECCTTTGGGST----TS----------G-GGGGG
T ss_pred hhHHHHHHhhhcCCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCCHH----HH----------H-HHHHH
Confidence 2333344557999876443221113 345557888987775332222221100 01 1 11112
Q ss_pred HHHCCCCCCCEEE-ecCCCCccChhHHHHHHHhc-ccCCCcEEEeeccccccccccCCCCcCcccHHHHHHHHHHHHcCC
Q 038230 374 AELSGIPAWRIII-DPGLGFSKKAEHNLDILLGL-AASHAPILIGPSRKRFLGEICNRPSADERDPATIASITAGVLGGA 451 (480)
Q Consensus 374 a~~~Gi~~~~Iil-DPgiGf~k~~~~~~~~lr~l-~~~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga 451 (480)
.+.|.. .|.| |- .|.. ++.+..++++.+ +..+.|+-+..- +-.+...+-+..|++.|+
T Consensus 153 -~~~G~~--~i~l~Dt-~G~~-~P~~~~~lv~~l~~~~~~~i~~H~H---------------n~~G~a~an~laA~~aGa 212 (320)
T 3dxi_A 153 -IDKIAD--LFCMVDS-FGGI-TPKEVKNLLKEVRKYTHVPVGFHGH---------------DNLQLGLINSITAIDDGI 212 (320)
T ss_dssp -GTTTCS--EEEEECT-TSCC-CHHHHHHHHHHHHHHCCSCEEEECB---------------CTTSCHHHHHHHHHHTTC
T ss_pred -hhCCCC--EEEECcc-cCCC-CHHHHHHHHHHHHHhCCCeEEEEeC---------------CCCccHHHHHHHHHHhCC
Confidence 256865 4433 43 4443 344555666666 345667654321 111223333455778888
Q ss_pred cEEEc
Q 038230 452 NIVRV 456 (480)
Q Consensus 452 ~IlRv 456 (480)
+++.+
T Consensus 213 ~~vd~ 217 (320)
T 3dxi_A 213 DFIDA 217 (320)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 88755
No 98
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=91.15 E-value=3.6 Score=40.37 Aligned_cols=115 Identities=16% Similarity=0.163 Sum_probs=71.7
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHH-HHHHHcCCcCCCCeEEEeC
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPV-LEAVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~v-i~~l~~~~~~~~~pISIDT 296 (480)
-+|| |-+.|. .|.+...++++.++++|+|-|-++| ||.-+ ...+. +|..++... ++..... ..+.+.+=+
T Consensus 15 ~vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~gr---vpviaGvg~ 85 (297)
T 3flu_A 15 LITP--MNQDGS-IHYEQLRDLIDWHIENGTDGIVAVG-TTGES-ATLSV-EEHTAVIEAVVKHVAKR---VPVIAGTGA 85 (297)
T ss_dssp CCCC--BCTTSC-BCHHHHHHHHHHHHHTTCCEEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHHTTS---SCEEEECCC
T ss_pred eecc--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEeCc-cccCc-ccCCH-HHHHHHHHHHHHHhCCC---CcEEEeCCC
Confidence 4688 876664 7999999999999999999999987 44433 24554 555555544 4444332 234445544
Q ss_pred CCHHH----HHHHHHcCCCEEecCCCCCC--C-ch----HHHHHHhcCCCEEEEcC
Q 038230 297 FYSKV----ASEAVGKGAHIVNDVSAGQL--D-PD----MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 297 ~~~~v----~~aaL~~G~~iINdVsg~~~--d-~~----m~~l~~~~~~~vVlmh~ 341 (480)
.+.+. ++.|-+.|+|-+--+...-. . ++ .-.++...+.|+++-+.
T Consensus 86 ~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~ 141 (297)
T 3flu_A 86 NNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNV 141 (297)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 44433 33445569997776654211 1 22 33455557999998764
No 99
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=91.14 E-value=0.73 Score=46.49 Aligned_cols=108 Identities=19% Similarity=0.219 Sum_probs=69.2
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMAT-KISAEKELERLIPVLEAVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~-~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT 296 (480)
=++|+-|.+|| .+.+++++.|+.+.+.|+|+|++-...+.+... +..+... .+.++.+++. .++||...-
T Consensus 225 Rls~~~~~~~g--~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~----~~~~~~ir~~---~~iPVi~~G 295 (349)
T 3hgj_A 225 RVSATDWGEGG--WSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQ----VPFADAVRKR---VGLRTGAVG 295 (349)
T ss_dssp EEESCCCSTTS--CCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTT----HHHHHHHHHH---HCCEEEECS
T ss_pred EeccccccCCC--CCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCcccc----HHHHHHHHHH---cCceEEEEC
Confidence 45677777776 477899999999999999999996322222100 0011011 1234555554 267877765
Q ss_pred --CCHHHHHHHHHcC-CCEEecCCCCCCCchHH-HHHHhcCC
Q 038230 297 --FYSKVASEAVGKG-AHIVNDVSAGQLDPDMY-KVVAGLKV 334 (480)
Q Consensus 297 --~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~-~l~~~~~~ 334 (480)
++++.++++|+.| +|+|-=-++.-.+|.+. +++++++.
T Consensus 296 gi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~~ 337 (349)
T 3hgj_A 296 LITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALGV 337 (349)
T ss_dssp SCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHHHHCCC
Confidence 5899999999998 99987555543467655 44445554
No 100
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=91.12 E-value=3.5 Score=40.94 Aligned_cols=116 Identities=19% Similarity=0.235 Sum_probs=73.1
Q ss_pred EecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEe
Q 038230 217 LNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVD 295 (480)
Q Consensus 217 lN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISID 295 (480)
-=+|| |-+.|. .|.+...+.++.++++|+|-|-++| ||.-+ ...+. +|..++...+ +..... ..+.+.+=
T Consensus 29 alvTP--f~~dg~-iD~~~l~~li~~li~~Gv~Gl~v~G-tTGE~-~~Ls~-~Er~~v~~~~v~~~~gr---vpViaGvg 99 (315)
T 3si9_A 29 ALITP--FDDNGA-IDEKAFCNFVEWQITQGINGVSPVG-TTGES-PTLTH-EEHKRIIELCVEQVAKR---VPVVAGAG 99 (315)
T ss_dssp ECCCC--BCTTSC-BCHHHHHHHHHHHHHTTCSEEECSS-TTTTG-GGSCH-HHHHHHHHHHHHHHTTS---SCBEEECC
T ss_pred eeECC--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEeCc-cccCc-cccCH-HHHHHHHHHHHHHhCCC---CcEEEeCC
Confidence 34688 876554 7899999999999999999999987 44433 23454 5565555544 444332 24555555
Q ss_pred CCCHHHH----HHHHHcCCCEEecCCCCCC--C-ch----HHHHHHhcCCCEEEEcC
Q 038230 296 TFYSKVA----SEAVGKGAHIVNDVSAGQL--D-PD----MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 296 T~~~~v~----~aaL~~G~~iINdVsg~~~--d-~~----m~~l~~~~~~~vVlmh~ 341 (480)
+.+.+.+ +.|-+.|+|-+--+.-.-. . ++ .-.++...+.|+++-+.
T Consensus 100 ~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~ 156 (315)
T 3si9_A 100 SNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNI 156 (315)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeC
Confidence 5444433 3455569997776654211 1 22 33455567999998764
No 101
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.11 E-value=0.89 Score=48.34 Aligned_cols=67 Identities=12% Similarity=0.210 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCEE
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHIV 313 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~iI 313 (480)
+..++++.++++|+|+|.|+.. .|+. ..+...|+.+++.. .++||.+ +-...+.++++.++|++.|
T Consensus 256 d~~era~aLveaGvd~I~Id~a--~g~~---------~~v~~~i~~i~~~~--~~~~vi~g~v~t~e~a~~~~~aGad~i 322 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTA--HGHS---------QGVIDKVKEVRAKY--PSLNIIAGNVATAEATKALIEAGANVV 322 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECS--CTTS---------HHHHHHHHHHHHHC--TTSEEEEEEECSHHHHHHHHHHTCSEE
T ss_pred chHHHHHHHHhhccceEEeccc--ccch---------hhhhhHHHHHHHhC--CCceEEeeeeccHHHHHHHHHhCCCEE
Confidence 4578899999999999999853 3332 23444566666653 3566655 7788999999999999988
Q ss_pred e
Q 038230 314 N 314 (480)
Q Consensus 314 N 314 (480)
-
T Consensus 323 ~ 323 (511)
T 3usb_A 323 K 323 (511)
T ss_dssp E
T ss_pred E
Confidence 5
No 102
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=91.04 E-value=5.3 Score=36.55 Aligned_cols=89 Identities=15% Similarity=0.292 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC-CCHHHHHHHHHcCC
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT-FYSKVASEAVGKGA 310 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT-~~~~v~~aaL~~G~ 310 (480)
+.++.++.++++.+.|+++|-+.... |. ..+. ++.+.+... ..+.|...+ ++++-++.|+++|+
T Consensus 17 d~~~~~~~~~~~~~~G~~~i~l~~~~--~~--------~~~~----i~~i~~~~~-~~l~vg~g~~~~~~~i~~a~~~Ga 81 (212)
T 2v82_A 17 TPDEALAHVGAVIDAGFDAVEIPLNS--PQ--------WEQS----IPAIVDAYG-DKALIGAGTVLKPEQVDALARMGC 81 (212)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEETTS--TT--------HHHH----HHHHHHHHT-TTSEEEEECCCSHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCC--hh--------HHHH----HHHHHHhCC-CCeEEEeccccCHHHHHHHHHcCC
Confidence 56889999999999999999996421 21 1222 233332210 123343333 45788999999999
Q ss_pred CEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 311 HIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 311 ~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+.|- .+. .+.++.+.++++|..+++
T Consensus 82 d~V~--~~~-~~~~~~~~~~~~g~~~~~ 106 (212)
T 2v82_A 82 QLIV--TPN-IHSEVIRRAVGYGMTVCP 106 (212)
T ss_dssp CEEE--CSS-CCHHHHHHHHHTTCEEEC
T ss_pred CEEE--eCC-CCHHHHHHHHHcCCCEEe
Confidence 9994 333 367888999999987653
No 103
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=90.69 E-value=0.75 Score=46.45 Aligned_cols=83 Identities=17% Similarity=0.141 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE------eCC----
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMA----TKISAEKELERLIPVLEAVLTMPEMEGKLVSV------DTF---- 297 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a----~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI------DT~---- 297 (480)
+++...+.|+...+.|+|.|||++.+..++. -.-+.....+.+..+|+++++. .++||++ |..
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~---v~~PV~vKiR~g~~~~~~~~ 144 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEA---VRVPVTVKMRLGLEGKETYR 144 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHH---CSSCEEEEEESCBTTCCCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHH---hCCceEEEEecCcCccccHH
Confidence 4677888888888999999999975422110 0012234567788888888875 3778777 211
Q ss_pred -CHHHHHHHHHcCCCEEecCCC
Q 038230 298 -YSKVASEAVGKGAHIVNDVSA 318 (480)
Q Consensus 298 -~~~v~~aaL~~G~~iINdVsg 318 (480)
-.+.++.+.++|++.|. |++
T Consensus 145 ~~~~~a~~l~~aG~d~I~-V~~ 165 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFV-VHA 165 (350)
T ss_dssp HHHHHHHHHHHTTCCEEE-EEC
T ss_pred HHHHHHHHHHHcCCCEEE-Eec
Confidence 13556677778999886 555
No 104
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=90.68 E-value=1.1 Score=42.11 Aligned_cols=154 Identities=17% Similarity=0.198 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHcCCCEEEeCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE--eCCCHHHHHHHHHcCC
Q 038230 235 AAVSQVRLMISEGADMIDIGAQ--STRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV--DTFYSKVASEAVGKGA 310 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~e--StrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI--DT~~~~v~~aaL~~G~ 310 (480)
+.++.|+.+.+.||+.|-+=.. +..++ .. . +.++.+++. .++|+-+ .-.+++-+++++++|+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~---~~-------~-~~i~~i~~~---~~ipv~v~ggi~~~~~~~~~l~~Ga 97 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRG---SN-------H-ELLAEVVGK---LDVQVELSGGIRDDESLAAALATGC 97 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSC---CC-------H-HHHHHHHHH---CSSEEEEESSCCSHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCC---Ch-------H-HHHHHHHHh---cCCcEEEECCCCCHHHHHHHHHcCC
Confidence 3566788999999999998321 11111 11 1 344555554 3678776 3567888999999999
Q ss_pred CEEecCCCCCCCc-hHHHHHHhcCCCEEEEcC-C---CCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 038230 311 HIVNDVSAGQLDP-DMYKVVAGLKVPYVAMHM-R---GDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRII 385 (480)
Q Consensus 311 ~iINdVsg~~~d~-~m~~l~~~~~~~vVlmh~-~---g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Ii 385 (480)
+.|---+....++ .+.+++++++..+++.-+ . | ..+..-+ .+.+.. ....+.++.+.+.|+. -|+
T Consensus 98 d~V~lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~-~~~v~~~---g~~~~~----~~~~e~~~~~~~~G~~--~i~ 167 (244)
T 2y88_A 98 ARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDG-EHRLRGR---GWETDG----GDLWDVLERLDSEGCS--RFV 167 (244)
T ss_dssp SEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETT-EEEEEEG---GGTEEE----EEHHHHHHHHHHTTCC--CEE
T ss_pred CEEEECchHhhChHHHHHHHHHcCCCEEEEEeccccCC-CCEEEEC---CccCCC----CCHHHHHHHHHhCCCC--EEE
Confidence 9886333222233 366677777755443211 0 0 0000000 000000 0123455666778986 576
Q ss_pred E---ecCCCCccChhHHHHHHHhc-ccCCCcEEE
Q 038230 386 I---DPGLGFSKKAEHNLDILLGL-AASHAPILI 415 (480)
Q Consensus 386 l---DPgiGf~k~~~~~~~~lr~l-~~~g~Pil~ 415 (480)
+ +++.++. .. +++.++++ +..++|++.
T Consensus 168 ~~~~~~~~~~~-g~--~~~~~~~l~~~~~ipvia 198 (244)
T 2y88_A 168 VTDITKDGTLG-GP--NLDLLAGVADRTDAPVIA 198 (244)
T ss_dssp EEETTTTTTTS-CC--CHHHHHHHHTTCSSCEEE
T ss_pred EEecCCccccC-CC--CHHHHHHHHHhCCCCEEE
Confidence 6 4432221 11 35666666 346889875
No 105
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=90.55 E-value=3.8 Score=40.98 Aligned_cols=117 Identities=16% Similarity=0.228 Sum_probs=72.1
Q ss_pred EEEe--cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeE
Q 038230 215 GILN--LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLV 292 (480)
Q Consensus 215 GIlN--~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pI 292 (480)
||+- +|| |-+.|. .|.+...+.++.++++|+|-|-++| ||.-+ ...+. +|..++...+.....- ++||
T Consensus 37 Gv~~a~vTP--F~~dg~-iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~-~~Ls~-eEr~~vi~~~ve~~~g----rvpV 106 (332)
T 2r8w_A 37 GLSAFPITP--ADEAGR-VDIEAFSALIARLDAAEVDSVGILG-STGIY-MYLTR-EERRRAIEAAATILRG----RRTL 106 (332)
T ss_dssp EEEECCCCC--BCTTCC-BCHHHHHHHHHHHHHHTCSEEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHHTT----SSEE
T ss_pred CeeEEeeCC--cCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccCh-hhCCH-HHHHHHHHHHHHHhCC----CCcE
Confidence 5443 578 865554 6899999999999999999999987 44433 23554 5566655544333321 3554
Q ss_pred --EEeCCC-HHHH---HHHHHcCCCEEecCCCCCC---CchH----HHHHHhcCCCEEEEcC
Q 038230 293 --SVDTFY-SKVA---SEAVGKGAHIVNDVSAGQL---DPDM----YKVVAGLKVPYVAMHM 341 (480)
Q Consensus 293 --SIDT~~-~~v~---~aaL~~G~~iINdVsg~~~---d~~m----~~l~~~~~~~vVlmh~ 341 (480)
.+=+.+ .+++ +.|-+.|+|-+--+.-.-. ++++ -.++...+.|+++-+.
T Consensus 107 iaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~ 168 (332)
T 2r8w_A 107 MAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNN 168 (332)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred EEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 454444 3333 3445569998876654211 1333 3455567899998664
No 106
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=90.50 E-value=4.8 Score=39.63 Aligned_cols=113 Identities=19% Similarity=0.238 Sum_probs=69.6
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE--EeC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS--VDT 296 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS--IDT 296 (480)
+|| |-+.|. .|.+...++++.++++|+|-|=++| ||.-+. ..+. +|..++...+.....- .+||- +=+
T Consensus 25 vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~gl~v~G-ttGE~~-~Ls~-~Er~~v~~~~~~~~~g----rvpviaGvg~ 94 (304)
T 3cpr_A 25 VTP--FTESGD-IDIAAGREVAAYLVDKGLDSLVLAG-TTGESP-TTTA-AEKLELLKAVREEVGD----RAKLIAGVGT 94 (304)
T ss_dssp CCC--BCTTSC-BCHHHHHHHHHHHHHTTCCEEEESS-TTTTTT-TSCH-HHHHHHHHHHHHHHTT----TSEEEEECCC
T ss_pred ecc--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccChh-hCCH-HHHHHHHHHHHHHhCC----CCcEEecCCC
Confidence 688 865553 6899999999999999999999987 444332 3454 5566555544333221 35554 433
Q ss_pred CC-HHH---HHHHHHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEcC
Q 038230 297 FY-SKV---ASEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 297 ~~-~~v---~~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh~ 341 (480)
.+ .++ ++.|-+.|+|-+--+...-. +++++ .++...+.|+++-+.
T Consensus 95 ~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~ 150 (304)
T 3cpr_A 95 NNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDI 150 (304)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 33 333 33345569997766654211 23333 455567899998664
No 107
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=90.48 E-value=3.4 Score=40.76 Aligned_cols=115 Identities=18% Similarity=0.244 Sum_probs=69.4
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEeC
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISIDT 296 (480)
=+|| |-+.|. .|.+...++++.++++|+|-|-++| ||.-+ ...+. +|..++...+ +..... ..+.+.+=+
T Consensus 23 ~vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~gi~v~G-ttGE~-~~Lt~-~Er~~v~~~~~~~~~gr---vpviaGvg~ 93 (304)
T 3l21_A 23 MVTP--FSGDGS-LDTATAARLANHLVDQGCDGLVVSG-TTGES-PTTTD-GEKIELLRAVLEAVGDR---ARVIAGAGT 93 (304)
T ss_dssp CCCC--BCTTSC-BCHHHHHHHHHHHHHTTCSEEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHHTTT---SEEEEECCC
T ss_pred EECC--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEeCc-cccch-hhCCH-HHHHHHHHHHHHHhCCC---CeEEEeCCC
Confidence 3688 866554 7999999999999999999999987 44433 23454 5565555444 334322 133344433
Q ss_pred CCHH-HH---HHHHHcCCCEEecCCCCCC---CchH----HHHHHhcCCCEEEEcC
Q 038230 297 FYSK-VA---SEAVGKGAHIVNDVSAGQL---DPDM----YKVVAGLKVPYVAMHM 341 (480)
Q Consensus 297 ~~~~-v~---~aaL~~G~~iINdVsg~~~---d~~m----~~l~~~~~~~vVlmh~ 341 (480)
.+.+ ++ +.|-+.|+|-+--+.-.-. ++++ -.++...+.|+++-+.
T Consensus 94 ~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 149 (304)
T 3l21_A 94 YDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDI 149 (304)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 3433 32 3344459997776654211 1333 3444557899998764
No 108
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=90.47 E-value=3.9 Score=40.61 Aligned_cols=115 Identities=20% Similarity=0.217 Sum_probs=72.3
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEeC
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISIDT 296 (480)
=+|| |-+.|. .|.+...+.++.++++|+|-|-++| ||.-+ ...+. +|..++...+ +..... ..+.+.+=+
T Consensus 32 ~vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~Gi~v~G-tTGE~-~~Ls~-~Er~~v~~~~v~~~~gr---vpViaGvg~ 102 (315)
T 3na8_A 32 TITP--FAADGG-LDLPALGRSIERLIDGGVHAIAPLG-STGEG-AYLSD-PEWDEVVDFTLKTVAHR---VPTIVSVSD 102 (315)
T ss_dssp CCCC--BCTTSS-BCHHHHHHHHHHHHHTTCSEEECSS-GGGTG-GGSCH-HHHHHHHHHHHHHHTTS---SCBEEECCC
T ss_pred eeCc--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccCh-hhCCH-HHHHHHHHHHHHHhCCC---CcEEEecCC
Confidence 4677 875554 7999999999999999999999987 33332 23454 5555555544 344332 245556655
Q ss_pred CCHHHH----HHHHHcCCCEEecCCCCCC--C-ch----HHHHHHhcCCCEEEEcC
Q 038230 297 FYSKVA----SEAVGKGAHIVNDVSAGQL--D-PD----MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 297 ~~~~v~----~aaL~~G~~iINdVsg~~~--d-~~----m~~l~~~~~~~vVlmh~ 341 (480)
.+.+.+ +.|-+.|+|-+--+...-. . ++ .-.++...+.|+++-+.
T Consensus 103 ~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 158 (315)
T 3na8_A 103 LTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNN 158 (315)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 554432 3445569998877754211 1 22 34455567899998764
No 109
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=90.46 E-value=2.7 Score=41.34 Aligned_cols=113 Identities=19% Similarity=0.244 Sum_probs=70.2
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEeCC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISIDT~ 297 (480)
+|| | +.|. .|.+...+.++.++++|+|-|-++| ||.-+ ...|. +|..++...+ +..... ..+.+.+=+.
T Consensus 10 vTP--f-~dg~-iD~~~l~~lv~~li~~Gv~gi~v~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~gr---vpviaGvg~~ 79 (297)
T 2rfg_A 10 ITP--F-INGQ-VDEKALAGLVDWQIKHGAHGLVPVG-TTGES-PTLTE-EEHKRVVALVAEQAQGR---VPVIAGAGSN 79 (297)
T ss_dssp CCC--E-ETTE-ECHHHHHHHHHHHHHTTCSEEECSS-GGGTG-GGSCH-HHHHHHHHHHHHHHTTS---SCBEEECCCS
T ss_pred ecC--c-CCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccch-hhCCH-HHHHHHHHHHHHHhCCC---CeEEEccCCC
Confidence 688 8 6554 6899999999999999999999987 34332 23554 5555555444 344322 2344555444
Q ss_pred CH-HHH---HHHHHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEcC
Q 038230 298 YS-KVA---SEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 298 ~~-~v~---~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh~ 341 (480)
+. +++ +.|-+.|+|-+--+...-. +++++ .++...+.|+++-+.
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 134 (297)
T 2rfg_A 80 NPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNI 134 (297)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 43 333 3444569998876654311 13333 455567899998664
No 110
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.40 E-value=4.2 Score=39.74 Aligned_cols=115 Identities=15% Similarity=0.141 Sum_probs=70.9
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEeC
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISIDT 296 (480)
-+|| |-+.|. .|.+...++++.++++|+|-|-++| ||.-+ ...+. +|..++...+ +..... ..+.+.+=+
T Consensus 9 ~vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~gr---~pviaGvg~ 79 (291)
T 3tak_A 9 IVTP--MLKDGG-VDWKSLEKLVEWHIEQGTNSIVAVG-TTGEA-STLSM-EEHTQVIKEIIRVANKR---IPIIAGTGA 79 (291)
T ss_dssp CCCC--BCTTSC-BCHHHHHHHHHHHHHHTCCEEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHHTTS---SCEEEECCC
T ss_pred eECC--CCCCCC-cCHHHHHHHHHHHHHCCCCEEEECc-ccccc-ccCCH-HHHHHHHHHHHHHhCCC---CeEEEeCCC
Confidence 3688 876554 7899999999999999999998887 44433 23454 5555555444 344332 234455544
Q ss_pred CCHHHH----HHHHHcCCCEEecCCCCCC--C-ch----HHHHHHhcCCCEEEEcC
Q 038230 297 FYSKVA----SEAVGKGAHIVNDVSAGQL--D-PD----MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 297 ~~~~v~----~aaL~~G~~iINdVsg~~~--d-~~----m~~l~~~~~~~vVlmh~ 341 (480)
.+.+.+ +.|-+.|+|-+--+...-. . ++ .-.++...+.|+++-+.
T Consensus 80 ~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~ 135 (291)
T 3tak_A 80 NSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNV 135 (291)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 444332 3445569997776654211 1 23 33455557999998764
No 111
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=90.29 E-value=3.8 Score=40.07 Aligned_cols=114 Identities=11% Similarity=0.116 Sum_probs=68.8
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEeCC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISIDT~ 297 (480)
+|| |.+.|. .|.+...++++.++++|+|-|-++| ||.-+ ...+. +|..++...+ +..... ..+.+.+=+.
T Consensus 10 vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~gr---~pviaGvg~~ 80 (292)
T 2ojp_A 10 VTP--MDEKGN-VCRASLKKLIDYHVASGTSAIVSVG-TTGES-ATLNH-DEHADVVMMTLDLADGR---IPVIAGTGAN 80 (292)
T ss_dssp CCC--BCTTSC-BCHHHHHHHHHHHHHHTCCEEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHHTTS---SCEEEECCCS
T ss_pred ecc--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccch-hhCCH-HHHHHHHHHHHHHhCCC---CcEEEecCCc
Confidence 688 865554 6899999999999999999999987 34433 23554 5555555444 343322 2344445444
Q ss_pred C-HHHHHHH---HHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEcC
Q 038230 298 Y-SKVASEA---VGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 298 ~-~~v~~aa---L~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh~ 341 (480)
+ .++++.+ -+.|+|-+--+...-. +++++ .++...+.|+++-+.
T Consensus 81 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~ 135 (292)
T 2ojp_A 81 ATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNV 135 (292)
T ss_dssp SHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECC
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 4 3343333 3349997766654211 23333 444456899998664
No 112
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=90.16 E-value=0.96 Score=42.39 Aligned_cols=66 Identities=12% Similarity=0.105 Sum_probs=47.7
Q ss_pred HHHHHHHHHcCCCEEEeCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEE
Q 038230 237 VSQVRLMISEGADMIDIGAQSTR-PMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIV 313 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eStr-P~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iI 313 (480)
.++++...+.|||+|.++++... |.- +.. ..+++.+++.. .+.++.++...++.++.+.+.|+|+|
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~~~~------~~~---~~~i~~i~~~~--~~~~v~~~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRDRHDG------LDI---ASFIRQVKEKY--PNQLLMADISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSCCTTC------CCH---HHHHHHHHHHC--TTCEEEEECSSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcccccCCCCC------ccH---HHHHHHHHHhC--CCCeEEEeCCCHHHHHHHHHcCCCEE
Confidence 45677889999999999986542 310 012 23455555532 26789999999999999999999999
No 113
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=90.15 E-value=3.9 Score=40.26 Aligned_cols=113 Identities=18% Similarity=0.191 Sum_probs=69.1
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE--eC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV--DT 296 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI--DT 296 (480)
+|| |-+.|. .|.+...+.++.++++|++-|-++| ||.-+ ...+. +|..++...+.....- ++||-+ =+
T Consensus 20 vTP--F~~dg~-iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~-~~Ls~-eEr~~v~~~~~~~~~g----rvpViaGvg~ 89 (303)
T 2wkj_A 20 LTP--FDQQQA-LDKASLRRLVQFNIQQGIDGLYVGG-STGEA-FVQSL-SEREQVLEIVAEEAKG----KIKLIAHVGC 89 (303)
T ss_dssp CCC--BCTTSS-BCHHHHHHHHHHHHHTTCSEEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHHTT----TSEEEEECCC
T ss_pred EcC--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECe-eccCh-hhCCH-HHHHHHHHHHHHHhCC----CCcEEEecCC
Confidence 688 765453 6899999999999999999999987 44433 23554 5566655544333321 456544 33
Q ss_pred CC-HHHH---HHHHHcCCCEEecCCCCCC---CchHH----HHHHhcC-CCEEEEcC
Q 038230 297 FY-SKVA---SEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLK-VPYVAMHM 341 (480)
Q Consensus 297 ~~-~~v~---~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~-~~vVlmh~ 341 (480)
.+ .+++ +.|-+.|+|-+--+...-. +++++ .++...+ .|+++-+.
T Consensus 90 ~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~ 146 (303)
T 2wkj_A 90 VSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNI 146 (303)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeC
Confidence 33 3333 3344569997766654211 13333 4455567 99998664
No 114
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=90.02 E-value=3.7 Score=40.71 Aligned_cols=122 Identities=15% Similarity=0.205 Sum_probs=73.8
Q ss_pred cEEEEEEe--cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHH-HHHHHcCCcC
Q 038230 211 TSVMGILN--LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPV-LEAVLTMPEM 287 (480)
Q Consensus 211 ~~imGIlN--~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~v-i~~l~~~~~~ 287 (480)
+.+=|++- +|| |-+.|. .|.+...+.++.++++|+|-|-++| ||.-+ ...+. +|..++... ++.....
T Consensus 22 ~~~~Gv~~a~vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~-~~Ls~-~Er~~v~~~~v~~~~gr--- 92 (314)
T 3qze_A 22 SMIAGSMVALVTP--FDAQGR-LDWDSLAKLVDFHLQEGTNAIVAVG-TTGES-ATLDV-EEHIQVIRRVVDQVKGR--- 92 (314)
T ss_dssp -CCCEEEEECCCC--BCTTSC-BCHHHHHHHHHHHHHHTCCEEEESS-GGGTG-GGCCH-HHHHHHHHHHHHHHTTS---
T ss_pred ccCCeeEEeeECC--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccCh-hhCCH-HHHHHHHHHHHHHhCCC---
Confidence 33446544 577 876664 7999999999999999999999987 34332 23454 566665554 4444332
Q ss_pred CCCeEEEeCCCHHH-H---HHHHHcCCCEEecCCCCCC--C-ch----HHHHHHhcCCCEEEEcC
Q 038230 288 EGKLVSVDTFYSKV-A---SEAVGKGAHIVNDVSAGQL--D-PD----MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 288 ~~~pISIDT~~~~v-~---~aaL~~G~~iINdVsg~~~--d-~~----m~~l~~~~~~~vVlmh~ 341 (480)
..+.+.+=+.+.+. + +.|-+.|+|-+--+...-. . ++ .-.++...+.|+++-+.
T Consensus 93 vpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 157 (314)
T 3qze_A 93 IPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNV 157 (314)
T ss_dssp SCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEEC
T ss_pred CcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 23444454444333 2 3444569997776654211 1 22 33455557999998764
No 115
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=90.00 E-value=0.89 Score=44.67 Aligned_cols=59 Identities=14% Similarity=0.187 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHcCCC-EEEeCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHcCCcCCCCeEEE
Q 038230 231 QSVEAAVSQVRLMISEGAD-MIDIGAQSTRPMATKIS-AEKELERLIPVLEAVLTMPEMEGKLVSV 294 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAd-iIDIG~eStrP~a~~v~-~~eE~~rl~~vi~~l~~~~~~~~~pISI 294 (480)
.+.++..+.|+.+.+.|+| +|+||..| |....-+ -....+.+..+++.+++. .++||.+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~--P~~~g~~~~g~~~e~~~~iv~~vr~~---~~~Pv~v 163 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSC--PNVPGEPQLAYDFEATEKLLKEVFTF---FTKPLGV 163 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCC--CCSSSCCCGGGCHHHHHHHHHHHTTT---CCSCEEE
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccC--CCCCCcccccCCHHHHHHHHHHHHHh---cCCCEEE
Confidence 3678899999999999999 99999854 3221100 011234567788888876 4778776
No 116
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=89.97 E-value=4.1 Score=40.95 Aligned_cols=118 Identities=15% Similarity=0.203 Sum_probs=71.7
Q ss_pred EEEe--cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCe
Q 038230 215 GILN--LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKL 291 (480)
Q Consensus 215 GIlN--~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~p 291 (480)
||+- +|| |-+.|. .|.+...+.++.++++|+|-|-++| ||.-+ ...+. +|..++...+ +.+... ..+.
T Consensus 34 Gv~~alvTP--F~~dg~-ID~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~-~~Ls~-eEr~~vi~~~ve~~~gr---vpVi 104 (343)
T 2v9d_A 34 GIIPPVSTI--FTADGQ-LDKPGTAALIDDLIKAGVDGLFFLG-SGGEF-SQLGA-EERKAIARFAIDHVDRR---VPVL 104 (343)
T ss_dssp EECCEECCC--BCTTSS-BCHHHHHHHHHHHHHTTCSCEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHHTTS---SCEE
T ss_pred CeEEeeECC--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEeCc-cccCh-hhCCH-HHHHHHHHHHHHHhCCC---CcEE
Confidence 6543 688 865553 6899999999999999999999987 34433 23554 5565555544 333322 2334
Q ss_pred EEEeCCCH-HHH---HHHHHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEcC
Q 038230 292 VSVDTFYS-KVA---SEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 292 ISIDT~~~-~v~---~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh~ 341 (480)
+.+=+.+. +++ +.|-+.|+|-+--+.-.-. +++++ .++...+.|+++-+.
T Consensus 105 aGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~ 165 (343)
T 2v9d_A 105 IGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNF 165 (343)
T ss_dssp EECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred EecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 44544443 333 3344569997766654211 23333 455567899998664
No 117
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=89.88 E-value=2.8 Score=41.22 Aligned_cols=114 Identities=17% Similarity=0.188 Sum_probs=69.7
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHH-HHHHHc-CCcCCCCeEEEe
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPV-LEAVLT-MPEMEGKLVSVD 295 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~v-i~~l~~-~~~~~~~pISID 295 (480)
=+|| | +.|. .|.+...++++.++++|+|-|-++| ||.-+ ...+. +|..++... ++.... . ..+.+.+=
T Consensus 16 ~vTP--f-~dg~-iD~~~l~~lv~~li~~Gv~gl~v~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~g~r---vpviaGvg 85 (301)
T 3m5v_A 16 LITP--F-KNGK-VDEQSYARLIKRQIENGIDAVVPVG-TTGES-ATLTH-EEHRTCIEIAVETCKGTK---VKVLAGAG 85 (301)
T ss_dssp CCCC--E-ETTE-ECHHHHHHHHHHHHHTTCCEEECSS-TTTTG-GGSCH-HHHHHHHHHHHHHHTTSS---CEEEEECC
T ss_pred eecC--c-CCCC-CCHHHHHHHHHHHHHcCCCEEEECc-cccCh-hhCCH-HHHHHHHHHHHHHhCCCC---CeEEEeCC
Confidence 3688 8 5554 7899999999999999999999987 44433 23454 555555544 444433 2 13334444
Q ss_pred CCCHHHH----HHHHHcCCCEEecCCCCCC--C-ch----HHHHHHhcCCCEEEEcC
Q 038230 296 TFYSKVA----SEAVGKGAHIVNDVSAGQL--D-PD----MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 296 T~~~~v~----~aaL~~G~~iINdVsg~~~--d-~~----m~~l~~~~~~~vVlmh~ 341 (480)
+.+.+.+ +.|-+.|+|-+--+...-. . ++ .-.++...+.|+++-+.
T Consensus 86 ~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 142 (301)
T 3m5v_A 86 SNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNV 142 (301)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 4343332 3344569997776654211 1 23 33455557999998764
No 118
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=89.78 E-value=6.4 Score=38.49 Aligned_cols=154 Identities=16% Similarity=0.215 Sum_probs=82.9
Q ss_pred HHHHHHcCCCEEEeCC-----CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC------CHHH-HH---H
Q 038230 240 VRLMISEGADMIDIGA-----QSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF------YSKV-AS---E 304 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~-----eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~------~~~v-~~---a 304 (480)
|+-.-++|.|+|=+|. .-..|...+++.+|-+.. .+.+.+-. ...+|+.|+. +++. ++ .
T Consensus 30 A~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h----~~aV~r~~--~~~~vvaD~pfgsy~~s~~~a~~na~r 103 (275)
T 1o66_A 30 AALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYH----TECVARGA--KNAMIVSDLPFGAYQQSKEQAFAAAAE 103 (275)
T ss_dssp HHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHH----HHHHHHHC--SSSEEEEECCTTSSSSCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHH----HHHHHhhC--CCCeEEEECCCCCccCCHHHHHHHHHH
Confidence 4445579999998872 123455567776544444 34444421 1467889954 2443 33 4
Q ss_pred HHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccch-hhHHHHHHHHHHHHHHHHHHCCCCCCC
Q 038230 305 AVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQY-DDVCKQVASELYSKVRDAELSGIPAWR 383 (480)
Q Consensus 305 aL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~-~~v~~ev~~~l~~~i~~a~~~Gi~~~~ 383 (480)
-+++|++.|| +-+...-.+.++.+.+.+.||+. |..=+|++......+.- ... +..+.+.++...++++|-.
T Consensus 104 l~kaGa~aVk-lEdg~e~~~~I~al~~agIpV~g-HiGLtPQs~~~~ggf~v~grt--~~a~~~i~rA~a~~eAGA~--- 176 (275)
T 1o66_A 104 LMAAGAHMVK-LEGGVWMAETTEFLQMRGIPVCA-HIGLTPQSVFAFGGYKVQGRG--GKAQALLNDAKAHDDAGAA--- 176 (275)
T ss_dssp HHHTTCSEEE-EECSGGGHHHHHHHHHTTCCEEE-EEESCGGGTTC-------------CHHHHHHHHHHHHHTTCS---
T ss_pred HHHcCCcEEE-ECCcHHHHHHHHHHHHcCCCeEe-eeccCceeecccCCeEEEeCh--HHHHHHHHHHHHHHHcCCc---
Confidence 5667999999 44432223455556678999773 54335554322111100 000 1124455667777899995
Q ss_pred EEEecCCCCccChhHHHHHHHhc-ccCCCcEE
Q 038230 384 IIIDPGLGFSKKAEHNLDILLGL-AASHAPIL 414 (480)
Q Consensus 384 IilDPgiGf~k~~~~~~~~lr~l-~~~g~Pil 414 (480)
.|+=+++- . ++.+++ +.+.+|++
T Consensus 177 ~ivlE~vp----~----~~a~~it~~l~iP~i 200 (275)
T 1o66_A 177 VVLMECVL----A----ELAKKVTETVSCPTI 200 (275)
T ss_dssp EEEEESCC----H----HHHHHHHHHCSSCEE
T ss_pred EEEEecCC----H----HHHHHHHHhCCCCEE
Confidence 55555651 1 234444 34577865
No 119
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=89.44 E-value=3.9 Score=40.29 Aligned_cols=84 Identities=15% Similarity=0.181 Sum_probs=57.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGA 310 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~ 310 (480)
.+.+++++.++++.+.|+.-|-+.+.. .|.. ..+++..+++.+++.. ..+-++.....++.++.-.++|+
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe-~p~~-------~~~~~~~li~~i~~~~--~~i~~s~g~l~~e~l~~L~~ag~ 153 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGE-DPYX-------MPDVISDIVKEIKKMG--VAVTLSLGEWPREYYEKWKEAGA 153 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESC-CGGG-------TTHHHHHHHHHHHTTS--CEEEEECCCCCHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCC-CCCc-------cHHHHHHHHHHHHhcC--ceEEEecCCCCHHHHHHHHHhCC
Confidence 689999999999999999988886421 1221 1345666777777641 13345567778999988888898
Q ss_pred CEEecCCCCCCCchH
Q 038230 311 HIVNDVSAGQLDPDM 325 (480)
Q Consensus 311 ~iINdVsg~~~d~~m 325 (480)
+.++ ++-...+++.
T Consensus 154 ~~v~-i~let~~~~~ 167 (348)
T 3iix_A 154 DRYL-LRHETANPVL 167 (348)
T ss_dssp CEEE-CCCBCSCHHH
T ss_pred CEEe-eeeeeCCHHH
Confidence 8877 6544444443
No 120
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=89.32 E-value=4.9 Score=39.75 Aligned_cols=101 Identities=21% Similarity=0.233 Sum_probs=74.7
Q ss_pred CccCCHHHHHHHHHHHHHcCCCEEEeCCCC------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHH
Q 038230 228 GKFQSVEAAVSQVRLMISEGADMIDIGAQS------TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKV 301 (480)
Q Consensus 228 g~~~~~e~a~~~A~~~v~~GAdiIDIG~eS------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v 301 (480)
+...+.+++.+.++++.+.|++.|-+-... ..++....+ .+|+++ +++..++. ++++.+-....+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~-~e~l~~---~~~~A~~~----g~~v~~H~~~~~~ 232 (403)
T 3gnh_A 161 FNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLT-YEEMKA---VVDEAHMA----GIKVAAHAHGASG 232 (403)
T ss_dssp TCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSC-HHHHHH---HHHHHHHT----TCEEEEEECSHHH
T ss_pred cccCCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCC-HHHHHH---HHHHHHHC----CCEEEEEeCCHHH
Confidence 344678999999999999999999885321 112222333 455554 45666665 8999999999999
Q ss_pred HHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 302 ASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 302 ~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
++.++++|++.|-=... .+++.++.+++.|+.++.
T Consensus 233 i~~~~~~g~~~i~H~~~--~~~~~~~~~~~~g~~~~~ 267 (403)
T 3gnh_A 233 IREAVRAGVDTIEHASL--VDDEGIKLAVQKGAYFSM 267 (403)
T ss_dssp HHHHHHTTCSEEEECTT--CCHHHHHHHHHHTCEEEC
T ss_pred HHHHHHhCCCEEecCCc--CCHHHHHHHHHCCCEEEe
Confidence 99999999987765443 368889999999998774
No 121
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=89.21 E-value=1.6 Score=40.35 Aligned_cols=84 Identities=15% Similarity=0.145 Sum_probs=48.0
Q ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEec
Q 038230 236 AVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVND 315 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINd 315 (480)
.++.++.+.+.||++|-+...+..| ..... +..+...++.+.+. .++++.++. -++.|++.|++.|--
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~----~~~~~-~~~~~~~l~~~~~~---~~v~v~v~~----~~~~a~~~gad~v~l 100 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDA----LTGEA-RIKFAEKAQAACRE---AGVPFIVND----DVELALNLKADGIHI 100 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTC----CCHHH-HHHHHHHHHHHHHH---HTCCEEEES----CHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCH----hHHHH-HHHHHHHHHHHHHH---cCCeEEEcC----HHHHHHHcCCCEEEE
Confidence 6678888999999999988533222 11100 02222223333222 267787763 356788889998842
Q ss_pred CCCCCCCchHHHHHHhcCC
Q 038230 316 VSAGQLDPDMYKVVAGLKV 334 (480)
Q Consensus 316 Vsg~~~d~~m~~l~~~~~~ 334 (480)
+.. +..+..+.+.++.
T Consensus 101 --~~~-~~~~~~~~~~~g~ 116 (227)
T 2tps_A 101 --GQE-DANAKEVRAAIGD 116 (227)
T ss_dssp --CTT-SSCHHHHHHHHTT
T ss_pred --CCC-ccCHHHHHHhcCC
Confidence 332 3455556555775
No 122
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=89.20 E-value=1.4 Score=46.67 Aligned_cols=67 Identities=15% Similarity=0.148 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCEE
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHIV 313 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~iI 313 (480)
+..++|+.++++|||+|.|+.. .+.. ..+...|+.+++.. .++||.+ +...++.++++.++|+|.|
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a--~g~~---------~~~~~~v~~i~~~~--p~~~Vi~g~v~t~e~a~~l~~aGaD~I 295 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTA--HGHS---------KGVIERVRWVKQTF--PDVQVIGGNIATAEAAKALAEAGADAV 295 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECS--CCSB---------HHHHHHHHHHHHHC--TTSEEEEEEECSHHHHHHHHHTTCSEE
T ss_pred chHHHHHHHhhcccceEEeccc--CCcc---------hhHHHHHHHHHHHC--CCceEEEeeeCcHHHHHHHHHcCCCEE
Confidence 4678899999999999999852 2221 13334556666542 2667655 5788899999999999988
Q ss_pred e
Q 038230 314 N 314 (480)
Q Consensus 314 N 314 (480)
-
T Consensus 296 ~ 296 (490)
T 4avf_A 296 K 296 (490)
T ss_dssp E
T ss_pred E
Confidence 6
No 123
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=89.14 E-value=0.63 Score=46.89 Aligned_cols=108 Identities=15% Similarity=0.159 Sum_probs=66.7
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD-- 295 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID-- 295 (480)
=++|+-|.++| .+.++.++.|+.+.+.|+|+|+|-...+.+...+..+.- -.+.++.+++. .++||..-
T Consensus 215 Rls~~~~~~~g--~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~----~~~~~~~ik~~---~~iPVi~~Gg 285 (340)
T 3gr7_A 215 RISASDYHPDG--LTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGY----QVPFAELIRRE---ADIPTGAVGL 285 (340)
T ss_dssp EEESCCCSTTS--CCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTT----THHHHHHHHHH---TTCCEEEESS
T ss_pred EeccccccCCC--CCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccc----cHHHHHHHHHH---cCCcEEeeCC
Confidence 45677777776 356789999999999999999993211222000001111 11334555554 26776663
Q ss_pred CCCHHHHHHHHHcC-CCEEecCCCCCCCchHHHH-HHhcCC
Q 038230 296 TFYSKVASEAVGKG-AHIVNDVSAGQLDPDMYKV-VAGLKV 334 (480)
Q Consensus 296 T~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l-~~~~~~ 334 (480)
-++++.++++|+.| +|+|-=-++.-.+|.+..- ..+++.
T Consensus 286 I~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~~ 326 (340)
T 3gr7_A 286 ITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELGA 326 (340)
T ss_dssp CCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCCC
Confidence 45899999999998 9988644443336776544 444553
No 124
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=89.01 E-value=1.8 Score=45.84 Aligned_cols=67 Identities=12% Similarity=0.155 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCEE
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHIV 313 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~iI 313 (480)
+..++|+.++++|||+|.|+.. .|.. ..+...|+.+++.. .++||.+ .-..++.++++.++|+|.|
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a--~g~~---------~~~~~~i~~ir~~~--p~~~Vi~g~v~t~e~a~~l~~aGaD~I 297 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSS--HGHS---------EGVLQRIRETRAAY--PHLEIIGGNVATAEGARALIEAGVSAV 297 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECS--CTTS---------HHHHHHHHHHHHHC--TTCCEEEEEECSHHHHHHHHHHTCSEE
T ss_pred chHHHHHHHHhccCceEEeccc--cccc---------hHHHHHHHHHHHHC--CCceEEEcccCcHHHHHHHHHhCCCEE
Confidence 4577899999999999999953 2321 23344566666652 2677755 5678899999999999988
Q ss_pred e
Q 038230 314 N 314 (480)
Q Consensus 314 N 314 (480)
-
T Consensus 298 ~ 298 (496)
T 4fxs_A 298 K 298 (496)
T ss_dssp E
T ss_pred E
Confidence 5
No 125
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=89.00 E-value=3.4 Score=40.39 Aligned_cols=114 Identities=18% Similarity=0.155 Sum_probs=70.0
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHcCCcCCCCeEEEeC
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLE-AVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~-~l~~~~~~~~~pISIDT 296 (480)
-+|| | +.|. .|.+...++++.++++|+|-|-++| ||.-+ ...+. +|..++...+. ..... ..+...+=+
T Consensus 9 ~vTP--f-~dg~-iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~gr---~pviaGvg~ 78 (292)
T 2vc6_A 9 LVTP--F-ADDR-IDEVALHDLVEWQIEEGSFGLVPCG-TTGES-PTLSK-SEHEQVVEITIKTANGR---VPVIAGAGS 78 (292)
T ss_dssp CCCC--E-ETTE-ECHHHHHHHHHHHHHTTCSEEETTS-GGGTG-GGSCH-HHHHHHHHHHHHHHTTS---SCBEEECCC
T ss_pred eecC--c-CCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccCh-hhCCH-HHHHHHHHHHHHHhCCC---CcEEEecCC
Confidence 3688 8 6554 6899999999999999999999987 33332 23454 55665555443 33322 234445544
Q ss_pred CC-HHHH---HHHHHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEcC
Q 038230 297 FY-SKVA---SEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 297 ~~-~~v~---~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh~ 341 (480)
.+ .+++ +.|-+.|+|-+--+...-. +++++ .++...+.|+++-+.
T Consensus 79 ~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~ 134 (292)
T 2vc6_A 79 NSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNI 134 (292)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 34 3333 3345569997766654211 23443 456667899998664
No 126
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=88.98 E-value=15 Score=34.55 Aligned_cols=138 Identities=9% Similarity=0.042 Sum_probs=82.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE-EeC--------CCHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS-VDT--------FYSKV 301 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS-IDT--------~~~~v 301 (480)
.+.+++++.+ .+.|.+-|++.... + +++++++. +.+++. ++.++ +-+ .++++
T Consensus 38 ~~~~~~l~~~---~~~G~~~vEl~~~~--~-------~~~~~~~~---~~l~~~----gl~v~~~~~~~~~~l~~~d~~~ 98 (287)
T 3kws_A 38 ESLNEKLDFM---EKLGVVGFEPGGGG--L-------AGRVNEIK---QALNGR----NIKVSAICAGFKGFILSTDPAI 98 (287)
T ss_dssp SSHHHHHHHH---HHTTCCEEECBSTT--C-------GGGHHHHH---HHHTTS----SCEECEEECCCCSCTTBSSHHH
T ss_pred CCHHHHHHHH---HHcCCCEEEecCCc--h-------HHHHHHHH---HHHHHc----CCeEEEEecCCCCcCCCCCHHH
Confidence 3566655554 46799999998752 1 23344433 333443 66653 422 23333
Q ss_pred HHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCC
Q 038230 302 ASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPA 381 (480)
Q Consensus 302 ~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~ 381 (480)
-+++++. -.+.++++++.|+++|++|..-.+.+ ... +..++..+...+.|.+..+.|.++||
T Consensus 99 r~~~~~~-------------~~~~i~~a~~lGa~~v~~~~g~~~~~-~~~--p~~~~~~~~~~~~l~~l~~~a~~~Gv-- 160 (287)
T 3kws_A 99 RKECMDT-------------MKEIIAAAGELGSTGVIIVPAFNGQV-PAL--PHTMETRDFLCEQFNEMGTFAAQHGT-- 160 (287)
T ss_dssp HHHHHHH-------------HHHHHHHHHHTTCSEEEECSCCTTCC-SBC--CSSHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred HHHHHHH-------------HHHHHHHHHHcCCCEEEEecCcCCcC-CCC--CCHHHHHHHHHHHHHHHHHHHHHcCC--
Confidence 3333321 14678999999999999886311110 000 01244566677888999999999999
Q ss_pred CCEEEecCC----CCccChhHHHHHHHhc
Q 038230 382 WRIIIDPGL----GFSKKAEHNLDILLGL 406 (480)
Q Consensus 382 ~~IilDPgi----Gf~k~~~~~~~~lr~l 406 (480)
+|.+-|.- .+..+..+..++++.+
T Consensus 161 -~l~lE~~~~~~~~~~~~~~~~~~ll~~v 188 (287)
T 3kws_A 161 -SVIFEPLNRKECFYLRQVADAASLCRDI 188 (287)
T ss_dssp -CEEECCCCTTTCSSCCCHHHHHHHHHHH
T ss_pred -EEEEEecCcccCcccCCHHHHHHHHHHc
Confidence 49999753 2345666667777765
No 127
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=88.89 E-value=7.1 Score=38.74 Aligned_cols=145 Identities=13% Similarity=0.123 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE--EeCCCH---
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQST------RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS--VDTFYS--- 299 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eSt------rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS--IDT~~~--- 299 (480)
.+++.+.+.++++++.||+-+=|=.+.. .++...++.+|-.+|+.-++++ . .+..|- .|++-.
T Consensus 101 g~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A--~----~~~~I~ARtda~~~~g~ 174 (305)
T 3ih1_A 101 GGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV--A----PSLYIVARTDARGVEGL 174 (305)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH--C----TTSEEEEEECCHHHHCH
T ss_pred CCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc--C----CCeEEEEeeccccccCH
Confidence 4577889999999999999988765431 2345677777767776665555 2 244443 455422
Q ss_pred -HHHHHHHH---cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEc-CCCCCCccccccccchhhHHHHHHHHHHHHHHHH
Q 038230 300 -KVASEAVG---KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMH-MRGDPSTMQNEENLQYDDVCKQVASELYSKVRDA 374 (480)
Q Consensus 300 -~v~~aaL~---~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh-~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a 374 (480)
+.++.|.. +|||.|- +-+....+++..++++...|+++.. ..|.+.. + ..+.+
T Consensus 175 ~~ai~Ra~ay~eAGAD~i~-~e~~~~~~~~~~i~~~~~~P~~~n~~~~g~tp~------~---------------~~~eL 232 (305)
T 3ih1_A 175 DEAIERANAYVKAGADAIF-PEALQSEEEFRLFNSKVNAPLLANMTEFGKTPY------Y---------------SAEEF 232 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEE-ETTCCSHHHHHHHHHHSCSCBEEECCTTSSSCC------C---------------CHHHH
T ss_pred HHHHHHHHHHHHcCCCEEE-EcCCCCHHHHHHHHHHcCCCEEEeecCCCCCCC------C---------------CHHHH
Confidence 44444433 4999997 4444422678888889999997533 2332211 0 02345
Q ss_pred HHCCCCCCCEEEecCCCCccChhHHHHHHHhc
Q 038230 375 ELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL 406 (480)
Q Consensus 375 ~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l 406 (480)
.+.|+. +++=|...|-.....-.+.++.+
T Consensus 233 ~~lGv~---~v~~~~~~~raa~~a~~~~~~~i 261 (305)
T 3ih1_A 233 ANMGFQ---MVIYPVTSLRVAAKAYENVFTLI 261 (305)
T ss_dssp HHTTCS---EEEECSHHHHHHHHHHHHHHHHH
T ss_pred HHcCCC---EEEEchHHHHHHHHHHHHHHHHH
Confidence 689995 77777665533332233344444
No 128
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=88.77 E-value=9.4 Score=35.04 Aligned_cols=138 Identities=15% Similarity=0.100 Sum_probs=80.5
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE----e--------C
Q 038230 229 KFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV----D--------T 296 (480)
Q Consensus 229 ~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI----D--------T 296 (480)
-..+.+...+.|+.+.+.||+.|.++. . +. ++.+++. +++|+-- | +
T Consensus 18 p~~~~~~~~~~a~~~~~~Ga~~i~~~~-----------~-~~-------i~~i~~~---~~~pv~~~~~~~~~~~~~~i~ 75 (223)
T 1y0e_A 18 PLHSSFIMSKMALAAYEGGAVGIRANT-----------K-ED-------ILAIKET---VDLPVIGIVKRDYDHSDVFIT 75 (223)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEES-----------H-HH-------HHHHHHH---CCSCEEEECBCCCTTCCCCBS
T ss_pred CCCCCccHHHHHHHHHHCCCeeeccCC-----------H-HH-------HHHHHHh---cCCCEEeeeccCCCccccccC
Confidence 355778899999999999999998852 1 22 4444443 3566621 1 1
Q ss_pred CCHHHHHHHHHcCCCEEecCCCCCCC-----chHHHHHHhc--CCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHH
Q 038230 297 FYSKVASEAVGKGAHIVNDVSAGQLD-----PDMYKVVAGL--KVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYS 369 (480)
Q Consensus 297 ~~~~v~~aaL~~G~~iINdVsg~~~d-----~~m~~l~~~~--~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~ 369 (480)
.+.+.++.++++|++.|.-......+ .++++.+++. +..+++- +.+. +
T Consensus 76 ~~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~-----~~t~--------------------~ 130 (223)
T 1y0e_A 76 ATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMAD-----IATV--------------------E 130 (223)
T ss_dssp CSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEE-----CSSH--------------------H
T ss_pred CcHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEec-----CCCH--------------------H
Confidence 35678889999999977522222112 3677788876 7666541 1111 1
Q ss_pred HHHHHHHCCCCCCCEEEec-CCC---CccC-hhHHHHHHHhc-ccCCCcEEE
Q 038230 370 KVRDAELSGIPAWRIIIDP-GLG---FSKK-AEHNLDILLGL-AASHAPILI 415 (480)
Q Consensus 370 ~i~~a~~~Gi~~~~IilDP-giG---f~k~-~~~~~~~lr~l-~~~g~Pil~ 415 (480)
.+.++.+.|++ =|.+-+ |.. +... ...+++.++++ +..++|++.
T Consensus 131 e~~~~~~~G~d--~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia 180 (223)
T 1y0e_A 131 EAKNAARLGFD--YIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIA 180 (223)
T ss_dssp HHHHHHHTTCS--EEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHcCCC--EEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEE
Confidence 12346788985 222222 221 1111 34467788887 346889875
No 129
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=88.74 E-value=2.8 Score=41.58 Aligned_cols=114 Identities=18% Similarity=0.154 Sum_probs=69.9
Q ss_pred cCCCCCCC-CCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEeC
Q 038230 219 LTPDSFSD-GGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 219 ~tpDSFsd-gg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISIDT 296 (480)
+|| |-+ .|. .|.+...+.++.++++|+|-|-++| ||.-+ ...+. +|..++...+ +..... ..+.+.+-+
T Consensus 20 vTP--f~~~dg~-iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~-~~Ls~-eEr~~v~~~~v~~~~gr---vpViaGvg~ 90 (316)
T 3e96_A 20 ITP--FRKSDGS-IDWHHYKETVDRIVDNGIDVIVPCG-NTSEF-YALSL-EEAKEEVRRTVEYVHGR---ALVVAGIGY 90 (316)
T ss_dssp CCC--BCTTTCC-BCHHHHHHHHHHHHTTTCCEECTTS-GGGTG-GGSCH-HHHHHHHHHHHHHHTTS---SEEEEEECS
T ss_pred eCC--ccCCCCC-CCHHHHHHHHHHHHHcCCCEEEeCc-cccCc-ccCCH-HHHHHHHHHHHHHhCCC---CcEEEEeCc
Confidence 578 865 454 7899999999999999999999997 44332 23454 5666655544 444332 234455554
Q ss_pred CCHHHHH---HHHHcCCCEEecCCCCCC---Cch----HHHHHHhcCCCEEEEcC
Q 038230 297 FYSKVAS---EAVGKGAHIVNDVSAGQL---DPD----MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 297 ~~~~v~~---aaL~~G~~iINdVsg~~~---d~~----m~~l~~~~~~~vVlmh~ 341 (480)
.-.++++ .|-+.|+|-+-.+...-. +++ .-.++...+.|+++-+.
T Consensus 91 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 91 ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 3333333 334459998876654211 123 33455557899998764
No 130
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=88.61 E-value=4.2 Score=40.75 Aligned_cols=148 Identities=14% Similarity=0.122 Sum_probs=79.7
Q ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCEEe
Q 038230 236 AVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~iIN 314 (480)
.++.++.|+++|||+|=+.- + -+..+|+++-.+...|.++.+.+..+..++|+.. .--+...++.-.+.|++.++
T Consensus 195 ~~~~~~~~~~aGad~i~i~D-~---~~~~lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~~~~l~~l~~~g~d~~~ 270 (359)
T 2inf_A 195 IIVYVKAQIKAGAKAIQIFD-S---WVGALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGASHLAGDWHDLPLDVVG 270 (359)
T ss_dssp HHHHHHHHHHTTCSEEEEEC-T---TGGGSCHHHHHHHTHHHHHHHHHHHGGGCSCEEEECTTCGGGHHHHHTSSCSEEE
T ss_pred HHHHHHHHHHhCCCEEEEeC-C---ccccCCHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcCCcHHHHHHHHHhCCCEEE
Confidence 44677889999999998763 2 2236787654444455554443321111455443 22224466666678999997
Q ss_pred cCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCcc
Q 038230 315 DVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSK 394 (480)
Q Consensus 315 dVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k 394 (480)
+.. .-.+.++.+. |-.++++-.- .| +.-. .+ .+++.+..++.++. |-.....|+-||-|+..
T Consensus 271 -~d~---~~d~~~~~~~-g~~~~l~Gnl-dp-~~l~---~t----~e~I~~~v~~~l~~----~~~~~g~Il~~gcgi~~ 332 (359)
T 2inf_A 271 -LDW---RLGIDEARSK-GITKTVQGNL-DP-SILL---AP----WEVIEQKTKEILDQ----GMESDGFIFNLGHGVFP 332 (359)
T ss_dssp -CCT---TSCHHHHHHT-TCCSEEECCB-CG-GGGG---SC----HHHHHHHHHHHHHH----HTTSSCEEBCBSSCCCT
T ss_pred -eCC---CCCHHHHHHc-CCCEEEEecC-Ch-HHhc---CC----HHHHHHHHHHHHHh----CCCCCCeEEeCCCCCCC
Confidence 321 2345555555 6555655432 13 2211 11 22333333444443 32113799999999854
Q ss_pred -ChhHHHHHHHh
Q 038230 395 -KAEHNLDILLG 405 (480)
Q Consensus 395 -~~~~~~~~lr~ 405 (480)
+..+|+..+-+
T Consensus 333 ~~~~enl~a~ve 344 (359)
T 2inf_A 333 DVSPEVLKKLTA 344 (359)
T ss_dssp TSCHHHHHHHHH
T ss_pred CcCHHHHHHHHH
Confidence 45666655443
No 131
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=88.53 E-value=5.5 Score=39.34 Aligned_cols=114 Identities=21% Similarity=0.279 Sum_probs=69.6
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEeCC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISIDT~ 297 (480)
+|| |-+.|. .|.+...++++.++++|+|-|=++| ||.-+ ...+. +|..++...+ +..... ..+.+.+=+.
T Consensus 17 vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~gl~v~G-tTGE~-~~Ls~-~Er~~v~~~~~~~~~gr---vpviaGvg~~ 87 (309)
T 3fkr_A 17 PTT--FADTGD-LDLASQKRAVDFMIDAGSDGLCILA-NFSEQ-FAITD-DERDVLTRTILEHVAGR---VPVIVTTSHY 87 (309)
T ss_dssp CCC--BCTTSS-BCHHHHHHHHHHHHHTTCSCEEESS-GGGTG-GGSCH-HHHHHHHHHHHHHHTTS---SCEEEECCCS
T ss_pred eCC--CCcCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccCc-ccCCH-HHHHHHHHHHHHHhCCC---CcEEEecCCc
Confidence 577 876554 7899999999999999999999987 44433 23454 5555555444 333322 1333444444
Q ss_pred CHHH----HHHHHHcCCCEEecCCCC-----CC-Cch----HHHHHHhcCCCEEEEcC
Q 038230 298 YSKV----ASEAVGKGAHIVNDVSAG-----QL-DPD----MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 298 ~~~v----~~aaL~~G~~iINdVsg~-----~~-d~~----m~~l~~~~~~~vVlmh~ 341 (480)
+.+. ++.|-+.|+|-+--+... .- +++ .-.++...+.|+++-+.
T Consensus 88 ~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~ 145 (309)
T 3fkr_A 88 STQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDA 145 (309)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred hHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 4333 234455699988776542 11 123 33455557999998664
No 132
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=88.48 E-value=4.7 Score=39.64 Aligned_cols=115 Identities=13% Similarity=0.132 Sum_probs=72.0
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHH-HHHHHcCCcCCCCeEEEeCC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPV-LEAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~v-i~~l~~~~~~~~~pISIDT~ 297 (480)
+|| |-+.|. .|.+...+.++.++++|+|-|-++| ||.-+ ...+. +|..++... ++..... ..+.+.+=+.
T Consensus 13 vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~gl~v~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~gr---vpviaGvg~~ 83 (300)
T 3eb2_A 13 VSP--VDAEGR-VRADVMGRLCDDLIQAGVHGLTPLG-STGEF-AYLGT-AQREAVVRATIEAAQRR---VPVVAGVAST 83 (300)
T ss_dssp CCC--BCTTSC-BCHHHHHHHHHHHHHTTCSCBBTTS-GGGTG-GGCCH-HHHHHHHHHHHHHHTTS---SCBEEEEEES
T ss_pred ecc--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccCc-cccCH-HHHHHHHHHHHHHhCCC---CcEEEeCCCC
Confidence 577 876664 7999999999999999999999887 44433 23554 555555544 4444332 2455666555
Q ss_pred CHHHH----HHHHHcCCCEEecCCCCCC--C-ch----HHHHHHhcCCCEEEEcCC
Q 038230 298 YSKVA----SEAVGKGAHIVNDVSAGQL--D-PD----MYKVVAGLKVPYVAMHMR 342 (480)
Q Consensus 298 ~~~v~----~aaL~~G~~iINdVsg~~~--d-~~----m~~l~~~~~~~vVlmh~~ 342 (480)
+.+.+ +.|-+.|+|-+--+...-. . ++ .-.++...+.|+++-+..
T Consensus 84 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P 139 (300)
T 3eb2_A 84 SVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNP 139 (300)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECc
Confidence 54433 2344459997766654211 1 22 334555578999987753
No 133
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=88.47 E-value=4.1 Score=37.99 Aligned_cols=82 Identities=9% Similarity=0.018 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE-E---e--------CCCHHHH
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS-V---D--------TFYSKVA 302 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS-I---D--------T~~~~v~ 302 (480)
...+.|+.+.+.||+.|.++. + ..++.+++. +++|+. + | +...+.+
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~~-----------~--------~~i~~i~~~---~~~p~i~~~~~~~~~~~~~i~~~~~~i 94 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRANS-----------V--------RDIKEIQAI---TDLPIIGIIKKDYPPQEPFITATMTEV 94 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEES-----------H--------HHHHHHHTT---CCSCEEEECBCCCTTSCCCBSCSHHHH
T ss_pred hHHHHHHHHHHCCCcEeecCC-----------H--------HHHHHHHHh---CCCCEEeeEcCCCCccccccCChHHHH
Confidence 577889999999999999862 1 125566665 467772 1 1 2356889
Q ss_pred HHHHHcCCCEEecCCCCCCC------chHHHHHHhc--CCCEEE
Q 038230 303 SEAVGKGAHIVNDVSAGQLD------PDMYKVVAGL--KVPYVA 338 (480)
Q Consensus 303 ~aaL~~G~~iINdVsg~~~d------~~m~~l~~~~--~~~vVl 338 (480)
+.++++|++.|.--.....+ .++++.+++. +..+++
T Consensus 95 ~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~ 138 (234)
T 1yxy_A 95 DQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMA 138 (234)
T ss_dssp HHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEE
Confidence 99999999998743322211 3577777776 665554
No 134
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=88.37 E-value=8.3 Score=37.47 Aligned_cols=156 Identities=14% Similarity=0.223 Sum_probs=84.6
Q ss_pred HHHHHHcCCCEEEeCC-----CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC-----HHH-HH---HH
Q 038230 240 VRLMISEGADMIDIGA-----QSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY-----SKV-AS---EA 305 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~-----eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~-----~~v-~~---aa 305 (480)
|+-.-++|.|+|=+|. .-..|...+++-+|-+.. .+.+.+-. ...+|..|+.. ++. ++ .-
T Consensus 30 A~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h----~~aV~r~~--~~~~vvaD~pfgsy~~~~~a~~~a~rl 103 (264)
T 1m3u_A 30 AKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYH----TAAVRRGA--PNCLLLADLPFMAYATPEQAFENAATV 103 (264)
T ss_dssp HHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHH----HHHHHHHC--TTSEEEEECCTTSSSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHH----HHHHHhhC--CCCcEEEECCCCCcCCHHHHHHHHHHH
Confidence 3444578999999982 123455567776544443 44444431 14678899765 432 22 45
Q ss_pred HHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 038230 306 VGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRII 385 (480)
Q Consensus 306 L~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Ii 385 (480)
+++|++.|+ +-+...-.+.++.+.+.+.||+. |..=+|++......+.-..-.++..+.+.++...++++|-. .|
T Consensus 104 ~kaGa~aVk-lEgg~e~~~~I~al~~agipV~g-HiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~---~i 178 (264)
T 1m3u_A 104 MRAGANMVK-IEGGEWLVETVQMLTERAVPVCG-HLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQ---LL 178 (264)
T ss_dssp HHTTCSEEE-CCCSGGGHHHHHHHHHTTCCEEE-EEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCC---EE
T ss_pred HHcCCCEEE-ECCcHHHHHHHHHHHHCCCCeEe-eecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCc---EE
Confidence 667999999 54432223445555678899774 54335554322111100000011224555677777899995 55
Q ss_pred EecCCCCccChhHHHHHHHhc-ccCCCcEE
Q 038230 386 IDPGLGFSKKAEHNLDILLGL-AASHAPIL 414 (480)
Q Consensus 386 lDPgiGf~k~~~~~~~~lr~l-~~~g~Pil 414 (480)
+=+++ . . ++.+++ +.+..|++
T Consensus 179 vlE~v---p-~----~~a~~it~~l~iP~i 200 (264)
T 1m3u_A 179 VLECV---P-V----ELAKRITEALAIPVI 200 (264)
T ss_dssp EEESC---C-H----HHHHHHHHHCSSCEE
T ss_pred EEecC---C-H----HHHHHHHHhCCCCEE
Confidence 55554 1 1 234444 34677865
No 135
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=88.34 E-value=1.1 Score=42.10 Aligned_cols=151 Identities=16% Similarity=0.107 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHcCCCEEEeCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcCC
Q 038230 235 AAVSQVRLMISEGADMIDIGAQ--STRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKGA 310 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~e--StrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G~ 310 (480)
+.++.|+.+.+.|||.|-+=.. +..+. .. . +.++.+++. .++|+-+. -.+++.+++++++|+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~---~~-------~-~~i~~i~~~---~~ipv~v~ggI~~~~~~~~~l~~Ga 98 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTG---DN-------R-ALIAEVAQA---MDIKVELSGGIRDDDTLAAALATGC 98 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSC---CC-------H-HHHHHHHHH---CSSEEEEESSCCSHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCC---Ch-------H-HHHHHHHHh---cCCcEEEECCcCCHHHHHHHHHcCC
Confidence 3566788889999999987311 00111 11 1 345555554 37887774 467889999999999
Q ss_pred CEEecCCCCCCCc-hHHHHHHhcCCCEEEEcC--CCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEe
Q 038230 311 HIVNDVSAGQLDP-DMYKVVAGLKVPYVAMHM--RGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIID 387 (480)
Q Consensus 311 ~iINdVsg~~~d~-~m~~l~~~~~~~vVlmh~--~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilD 387 (480)
+.|---+....++ .+.+++++++..+++.-+ .|...+ ..-.... .+ ..+.++.+.+.|+. -|++=
T Consensus 99 d~V~lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~-~g~~~~~-~~--------~~e~~~~~~~~G~~--~i~~~ 166 (244)
T 1vzw_A 99 TRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRG-RGWTRDG-GD--------LYETLDRLNKEGCA--RYVVT 166 (244)
T ss_dssp SEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECC-SSSCCCC-CB--------HHHHHHHHHHTTCC--CEEEE
T ss_pred CEEEECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEEE-cCcccCC-CC--------HHHHHHHHHhCCCC--EEEEe
Confidence 9875322211133 366777777755543211 111000 0000000 01 12445566778986 56653
Q ss_pred ---cCC-CCccChhHHHHHHHhc-ccCCCcEEE
Q 038230 388 ---PGL-GFSKKAEHNLDILLGL-AASHAPILI 415 (480)
Q Consensus 388 ---Pgi-Gf~k~~~~~~~~lr~l-~~~g~Pil~ 415 (480)
|+. +.+. +++.++++ +..++|++.
T Consensus 167 ~~~~~~~~~g~----~~~~~~~i~~~~~ipvia 195 (244)
T 1vzw_A 167 DIAKDGTLQGP----NLELLKNVCAATDRPVVA 195 (244)
T ss_dssp EC-------CC----CHHHHHHHHHTCSSCEEE
T ss_pred ccCcccccCCC----CHHHHHHHHHhcCCCEEE
Confidence 322 2222 35666666 346889886
No 136
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=88.31 E-value=4.9 Score=39.81 Aligned_cols=112 Identities=14% Similarity=0.215 Sum_probs=68.9
Q ss_pred cCCCCC-CCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEeC
Q 038230 219 LTPDSF-SDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 219 ~tpDSF-sdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISIDT 296 (480)
+|| | -+.|. .|.+...+.++.++++|+|-|-++| ||.-+ ...+. +|..++...+ +..... ..+.+.+=+
T Consensus 20 vTP--F~~~dg~-iD~~~l~~lv~~li~~Gv~gl~v~G-tTGE~-~~Ls~-eEr~~vi~~~~~~~~gr---vpViaGvg~ 90 (314)
T 3d0c_A 20 IVP--FLEGTRE-IDWKGLDDNVEFLLQNGIEVIVPNG-NTGEF-YALTI-EEAKQVATRVTELVNGR---ATVVAGIGY 90 (314)
T ss_dssp CCC--BCTTTCC-BCHHHHHHHHHHHHHTTCSEECTTS-GGGTG-GGSCH-HHHHHHHHHHHHHHTTS---SEEEEEECS
T ss_pred ecc--ccCCCCC-CCHHHHHHHHHHHHHcCCCEEEECc-ccCCh-hhCCH-HHHHHHHHHHHHHhCCC---CeEEecCCc
Confidence 588 8 44443 6899999999999999999999987 33332 23554 5565555444 333322 123345555
Q ss_pred CCH-HHH---HHHHHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEc
Q 038230 297 FYS-KVA---SEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMH 340 (480)
Q Consensus 297 ~~~-~v~---~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh 340 (480)
+. +++ +.|-+.|+|-+--+...-. .++++ .++...+.|+++-+
T Consensus 91 -st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 91 -SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp -SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred -CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 43 333 3344569998877665311 13333 55666789999876
No 137
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.26 E-value=5.5 Score=38.94 Aligned_cols=113 Identities=15% Similarity=0.168 Sum_probs=68.9
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHH-cCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE--Ee
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMIS-EGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS--VD 295 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~-~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS--ID 295 (480)
+|| |.+.|. .|.+...++++.+++ +|+|-|-++| ||.-+ ...|. +|..++...+.....- ++||- +=
T Consensus 12 vTP--f~~dg~-iD~~~l~~lv~~li~~~Gv~gl~~~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~g----rvpviaGvg 81 (293)
T 1f6k_A 12 LVS--FNEDGT-INEKGLRQIIRHNIDKMKVDGLYVGG-STGEN-FMLST-EEKKEIFRIAKDEAKD----QIALIAQVG 81 (293)
T ss_dssp CCC--BCTTSC-BCHHHHHHHHHHHHHTSCCSEEEESS-GGGTG-GGSCH-HHHHHHHHHHHHHHTT----SSEEEEECC
T ss_pred EcC--CCCCCC-cCHHHHHHHHHHHHhhCCCcEEEeCc-cccch-hhCCH-HHHHHHHHHHHHHhCC----CCeEEEecC
Confidence 688 865554 689999999999999 9999999987 33332 23454 5565555544333321 45554 43
Q ss_pred CCC-HHHH---HHHHHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEcC
Q 038230 296 TFY-SKVA---SEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 296 T~~-~~v~---~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh~ 341 (480)
+.+ .+++ +.|-+.|+|-+--+...-. +++++ .++...+.|+++-+.
T Consensus 82 ~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~ 138 (293)
T 1f6k_A 82 SVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSI 138 (293)
T ss_dssp CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 333 3333 3344569997766654211 23333 455557899998664
No 138
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=88.13 E-value=2.8 Score=39.70 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHcCCC--EEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcC--Cc-CCCCeEEEeCCCHHHHHHHHHcC
Q 038230 235 AAVSQVRLMISEGAD--MIDIGAQSTRPMATKISAEKELERLIPVLEAVLTM--PE-MEGKLVSVDTFYSKVASEAVGKG 309 (480)
Q Consensus 235 ~a~~~A~~~v~~GAd--iIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~--~~-~~~~pISIDT~~~~v~~aaL~~G 309 (480)
..-+..+.+.+.||| -+||+=...-|+.. ..+ ++++.|++. .+ .-++-+.+.+.. .-++.+.++|
T Consensus 18 ~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~-~G~--------~~v~~ir~~~~~~~~~dvhLmv~~p~-~~i~~~~~aG 87 (228)
T 3ovp_A 18 NLGAECLRMLDSGADYLHLDVMDGHFVPNIT-FGH--------PVVESLRKQLGQDPFFDMHMMVSKPE-QWVKPMAVAG 87 (228)
T ss_dssp GHHHHHHHHHHTTCSCEEEEEEBSSSSSCBC-BCH--------HHHHHHHHHHCSSSCEEEEEECSCGG-GGHHHHHHHT
T ss_pred hHHHHHHHHHHcCCCEEEEEecCCCcCcccc-cCH--------HHHHHHHHhhCCCCcEEEEEEeCCHH-HHHHHHHHcC
Confidence 344455666689999 67777443334432 111 234444433 10 012334443332 3577888899
Q ss_pred CCEEecCCCCCCC--chHHHHHHhcCCCEEEEc
Q 038230 310 AHIVNDVSAGQLD--PDMYKVVAGLKVPYVAMH 340 (480)
Q Consensus 310 ~~iINdVsg~~~d--~~m~~l~~~~~~~vVlmh 340 (480)
+++|. +-++..+ .+.+..++++|+.+.+.-
T Consensus 88 ad~it-vH~Ea~~~~~~~i~~i~~~G~k~gval 119 (228)
T 3ovp_A 88 ANQYT-FHLEATENPGALIKDIRENGMKVGLAI 119 (228)
T ss_dssp CSEEE-EEGGGCSCHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEE-EccCCchhHHHHHHHHHHcCCCEEEEE
Confidence 99987 4333212 357888899998766643
No 139
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=88.03 E-value=0.56 Score=45.86 Aligned_cols=78 Identities=10% Similarity=0.059 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHH-cCCCEEEeCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE----eCCC-HHHHH
Q 038230 232 SVEAAVSQVRLMIS-EGADMIDIGAQSTR--PMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV----DTFY-SKVAS 303 (480)
Q Consensus 232 ~~e~a~~~A~~~v~-~GAdiIDIG~eStr--P~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI----DT~~-~~v~~ 303 (480)
+.++..+.|+.+.+ .|+|.|+|+..+.. ++.... -...+.+..+++.+++. .++||.+ +..+ .+.++
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~--g~~~~~~~eii~~v~~~---~~~pv~vk~~~~~~~~~~~a~ 183 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAF--GTDPEVAAALVKACKAV---SKVPLYVKLSPNVTDIVPIAK 183 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEG--GGCHHHHHHHHHHHHHH---CSSCEEEEECSCSSCSHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhh--cCCHHHHHHHHHHHHHh---cCCCEEEEECCChHHHHHHHH
Confidence 46777777777776 99999999874321 110000 01234566778888765 3677776 5444 34466
Q ss_pred HHHHcCCCEEe
Q 038230 304 EAVGKGAHIVN 314 (480)
Q Consensus 304 aaL~~G~~iIN 314 (480)
.+.++|++.|.
T Consensus 184 ~l~~~G~d~i~ 194 (311)
T 1ep3_A 184 AVEAAGADGLT 194 (311)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHHcCCCEEE
Confidence 66667777665
No 140
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=87.90 E-value=5.6 Score=38.92 Aligned_cols=113 Identities=17% Similarity=0.266 Sum_probs=68.9
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeE--EEeC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLV--SVDT 296 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pI--SIDT 296 (480)
+|| |-+.|. .|.+...++++.++++|+|-|-++| ||.-+ ...+. +|..++...+..... .++|| .+=+
T Consensus 12 vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~----gr~pviaGvg~ 81 (294)
T 3b4u_A 12 TTP--FKTDGT-VDIDAMIAHARRCLSNGCDSVTLFG-TTGEG-CSVGS-RERQAILSSFIAAGI----APSRIVTGVLV 81 (294)
T ss_dssp CCC--BCTTSS-BCHHHHHHHHHHHHHTTCSEEEESS-TTTTG-GGSCH-HHHHHHHHHHHHTTC----CGGGEEEEECC
T ss_pred ECC--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccCh-hhCCH-HHHHHHHHHHHHHhC----CCCcEEEeCCC
Confidence 688 865553 6899999999999999999999987 34433 23454 566665544432221 13454 4544
Q ss_pred CCH-HH---HHHHHHcCCCEEecCCCCCC----CchHH----HHHHhc---CCCEEEEcC
Q 038230 297 FYS-KV---ASEAVGKGAHIVNDVSAGQL----DPDMY----KVVAGL---KVPYVAMHM 341 (480)
Q Consensus 297 ~~~-~v---~~aaL~~G~~iINdVsg~~~----d~~m~----~l~~~~---~~~vVlmh~ 341 (480)
.+. ++ ++.|-+.|+|-+--+...-. +++++ .++... +.|+++-+.
T Consensus 82 ~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~ 141 (294)
T 3b4u_A 82 DSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNI 141 (294)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred ccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEEC
Confidence 443 33 33445569997776654211 23333 445556 899998664
No 141
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=87.89 E-value=5.4 Score=38.94 Aligned_cols=113 Identities=14% Similarity=0.170 Sum_probs=68.5
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEeCC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISIDT~ 297 (480)
+|| |.+.| .|.+...++++.++++|+|-|-++| ||.-+ ...+. +|..++...+ +..... ..+.+.+=+.
T Consensus 11 vTP--f~~dg--iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~gr---~pvi~Gvg~~ 80 (291)
T 3a5f_A 11 ITP--FTNTG--VDFDKLSELIEWHIKSKTDAIIVCG-TTGEA-TTMTE-TERKETIKFVIDKVNKR---IPVIAGTGSN 80 (291)
T ss_dssp CCC--BCSSS--BCHHHHHHHHHHHHHTTCCEEEESS-GGGTG-GGSCH-HHHHHHHHHHHHHHTTS---SCEEEECCCS
T ss_pred EcC--cCCCC--cCHHHHHHHHHHHHHcCCCEEEECc-cccCh-hhCCH-HHHHHHHHHHHHHhCCC---CcEEEeCCcc
Confidence 688 87666 8999999999999999999999987 33332 23454 5565555544 333322 1333444443
Q ss_pred C-HHH---HHHHHHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEcC
Q 038230 298 Y-SKV---ASEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 298 ~-~~v---~~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh~ 341 (480)
+ .++ ++.|-+.|+|-+--+.-.-. +++++ .++...+.|+++-+.
T Consensus 81 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~ 135 (291)
T 3a5f_A 81 NTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNV 135 (291)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEEC
T ss_pred cHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 3 333 33445569997766654211 23444 234446789988664
No 142
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=87.85 E-value=5.3 Score=38.94 Aligned_cols=112 Identities=18% Similarity=0.213 Sum_probs=68.6
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE--eC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV--DT 296 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI--DT 296 (480)
+|| |-| | -.|.+...++++.++++|+|-|-++| ||.-+ ...|. +|..++...+.....- ++||-+ =+
T Consensus 10 vTP--f~d-g-~iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~g----r~pviaGvg~ 78 (289)
T 2yxg_A 10 ITP--FKN-K-EVDFDGLEENINFLIENGVSGIVAVG-TTGES-PTLSH-EEHKKVIEKVVDVVNG----RVQVIAGAGS 78 (289)
T ss_dssp CCC--EET-T-EECHHHHHHHHHHHHHTTCSEEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHHTT----SSEEEEECCC
T ss_pred ecC--cCC-C-CcCHHHHHHHHHHHHHCCCCEEEECc-cccCh-hhCCH-HHHHHHHHHHHHHhCC----CCcEEEeCCC
Confidence 588 763 3 36899999999999999999999987 44433 23554 5565555544333221 355544 33
Q ss_pred CC-HHHH---HHHHHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEcC
Q 038230 297 FY-SKVA---SEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 297 ~~-~~v~---~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh~ 341 (480)
.+ .+++ +.|-+.|+|-+--+...-. +++++ .++...+.|+++-+.
T Consensus 79 ~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~ 134 (289)
T 2yxg_A 79 NCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNV 134 (289)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 33 3333 3444569997766654211 13333 455667899998664
No 143
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=87.66 E-value=12 Score=37.45 Aligned_cols=134 Identities=13% Similarity=0.186 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHcCCCEEEeCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE---eCCCHHHHHHHHH-cC
Q 038230 235 AAVSQVRLMISEGADMIDIGAQ-STRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV---DTFYSKVASEAVG-KG 309 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~e-StrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI---DT~~~~v~~aaL~-~G 309 (480)
+.++.|.++ ..|..-+|+.|. ...| + + .+.++.+..++. ++++.+ .+..++.+..|++ .|
T Consensus 153 ~~l~~a~~~-~~~vvG~dL~g~E~~~~------~-~---~~~~~~~~A~~~----gl~~~~HagE~~~~~~i~~al~~lg 217 (343)
T 3rys_A 153 EVLDQLLAM-HAPIAGIGLDSAEVGNP------P-S---KFERLYQRAAEA----GLRRIAHAGEEGPASYITEALDVLH 217 (343)
T ss_dssp HHHHHHHHT-TCCCCEEEEESCCTTCC------G-G---GGHHHHHHHHHT----TCEEEEEESSSSCHHHHHHHHHTSC
T ss_pred HHHHHHHhC-CCCEEEEecCCcccCCC------H-H---HHHHHHHHHHHC----CCeEEEeeCCCCCHHHHHHHHhcCC
Confidence 444555554 578889999763 2222 1 2 234556666665 788777 3457888999998 78
Q ss_pred CCEEecCCCCCCCchHHHHHHhcCCCEEEEcCC----CCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 038230 310 AHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMR----GDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRII 385 (480)
Q Consensus 310 ~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~----g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Ii 385 (480)
++-|-=-.....+++.++.+++.++++.+++.. |.-.++.. .-+..+.++|++ +-
T Consensus 218 ~~rIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~~~~~~~------------------hPi~~ll~~Gv~---V~ 276 (343)
T 3rys_A 218 VERIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRLRAVDKLAD------------------HPLPEMLAIGLN---VC 276 (343)
T ss_dssp CSEEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTSSSCGGG------------------CSHHHHHHTTCC---EE
T ss_pred cceeeeeeeecCChHHHHHHHhcCCCeeEchhHHHHhCCCCCccc------------------chHHHHHHCCCe---EE
Confidence 887643222233578999999999999998741 21111111 123455678995 66
Q ss_pred E---ecCCCCccChhHHHHHHHh
Q 038230 386 I---DPGLGFSKKAEHNLDILLG 405 (480)
Q Consensus 386 l---DPgiGf~k~~~~~~~~lr~ 405 (480)
| ||++ |+.+..+.+.+...
T Consensus 277 l~TDdp~~-~~~~l~~E~~~a~~ 298 (343)
T 3rys_A 277 VNSDDPAY-FGGYVDDNFEQLVK 298 (343)
T ss_dssp ECCBSTTT-TTCCHHHHHHHHHH
T ss_pred EeCCCccc-cCCCHHHHHHHHHH
Confidence 6 6765 44477666766654
No 144
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=87.61 E-value=1.8 Score=45.58 Aligned_cols=80 Identities=14% Similarity=0.132 Sum_probs=54.7
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE---eCCCH
Q 038230 223 SFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV---DTFYS 299 (480)
Q Consensus 223 SFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI---DT~~~ 299 (480)
||.|+.++ +++.+++.++++.+.||++|-|.= |.- +....++.++ ++.+++. .++||++ ||+--
T Consensus 148 ~~~~~~~~-~~e~~~~~a~~l~~~Gad~I~l~D--T~G----~~~P~~v~~l---v~~l~~~---~~~~i~~H~Hnd~Gl 214 (464)
T 2nx9_A 148 CYTTSPVH-NLQTWVDVAQQLAELGVDSIALKD--MAG----ILTPYAAEEL---VSTLKKQ---VDVELHLHCHSTAGL 214 (464)
T ss_dssp ECCCCTTC-CHHHHHHHHHHHHHTTCSEEEEEE--TTS----CCCHHHHHHH---HHHHHHH---CCSCEEEEECCTTSC
T ss_pred EeeeCCCC-CHHHHHHHHHHHHHCCCCEEEEcC--CCC----CcCHHHHHHH---HHHHHHh---cCCeEEEEECCCCCh
Confidence 45555555 899999999999999999998861 111 1112455554 4555654 2789998 44544
Q ss_pred H--HHHHHHHcCCCEEec
Q 038230 300 K--VASEAVGKGAHIVND 315 (480)
Q Consensus 300 ~--v~~aaL~~G~~iINd 315 (480)
. ...+|+++|+++|..
T Consensus 215 AvAN~laAv~AGa~~VD~ 232 (464)
T 2nx9_A 215 ADMTLLKAIEAGVDRVDT 232 (464)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHhCCCEEEE
Confidence 4 457889999999853
No 145
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=87.50 E-value=1.6 Score=44.40 Aligned_cols=64 Identities=17% Similarity=0.310 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCEEe
Q 038230 237 VSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~iIN 314 (480)
.++++.++++|||+|.|+.....| +.+...|+.+++. .++||.+ ....++.++++.++|+|.|-
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~-----------~~~~~~i~~i~~~---~~~~Vivg~v~t~e~A~~l~~aGaD~I~ 171 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHS-----------LNIIRTLKEIKSK---MNIDVIVGNVVTEEATKELIENGADGIK 171 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSB-----------HHHHHHHHHHHHH---CCCEEEEEEECSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCc-----------HHHHHHHHHHHHh---cCCcEEEccCCCHHHHHHHHHcCcCEEE
Confidence 578899999999999998532111 2333446666654 2678776 77889999999999999886
No 146
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=87.39 E-value=2.7 Score=42.42 Aligned_cols=82 Identities=13% Similarity=0.071 Sum_probs=51.8
Q ss_pred CCHHHHHHHHHHHHHcCCC-EEEeCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE----EeCCCHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGAD-MIDIGAQSTR-PMATKISAEKELERLIPVLEAVLTMPEMEGKLVS----VDTFYSKVASE 304 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAd-iIDIG~eStr-P~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS----IDT~~~~v~~a 304 (480)
.++++.++-|+++.+.|++ +||||..+-. ||. -....+.+.+..+++++++. .++||. .|+...+.++.
T Consensus 138 ~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~--~~l~~~~e~l~~il~av~~~---~~~PV~vKi~p~~~~~~~a~~ 212 (345)
T 3oix_A 138 MSPEETHTILXMVEASKYQGLVELNLSCPNVPGX--PQIAYDFETTDQILSEVFTY---FTKPLGIKLPPYFDIVHFDQA 212 (345)
T ss_dssp SSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTC--CCGGGCHHHHHHHHHHHTTT---CCSCEEEEECCCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCc--hhhcCCHHHHHHHHHHHHHH---hCCCeEEEECCCCCHHHHHHH
Confidence 4678888889988888987 9999975422 221 12223456677888888876 356654 47544444444
Q ss_pred HHHc---CCCEEecCC
Q 038230 305 AVGK---GAHIVNDVS 317 (480)
Q Consensus 305 aL~~---G~~iINdVs 317 (480)
+-++ |.++||-++
T Consensus 213 ~~~aga~~i~~int~n 228 (345)
T 3oix_A 213 AAIFNXYPLTFVNCIN 228 (345)
T ss_dssp HHHHTTSCCSEEEECC
T ss_pred HHHhCCCceEEEEeec
Confidence 4444 456777553
No 147
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=87.29 E-value=5 Score=40.37 Aligned_cols=116 Identities=13% Similarity=0.132 Sum_probs=71.2
Q ss_pred EEEe--cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeE
Q 038230 215 GILN--LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLV 292 (480)
Q Consensus 215 GIlN--~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pI 292 (480)
||+- +|| |-+.|. .|.+...+.++.++++|+|-|-++| ||.-+ ...+ .+|..++... ..... ..+.+
T Consensus 29 Gv~~alvTP--F~~dg~-ID~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~-~~Ls-~eEr~~vi~~--~~~gr---vpVia 97 (344)
T 2hmc_A 29 GVIPALMTP--CRQDRT-PDFDALVRKGKELIADGMSAVVYCG-SMGDW-PLLT-DEQRMEGVER--LVKAG---IPVIV 97 (344)
T ss_dssp EEEEBCCCC--BCTTSS-BCHHHHHHHHHHHHHTTCCCEEESS-GGGTG-GGSC-HHHHHHHHHH--HHHTT---CCEEE
T ss_pred ceEEeeeCC--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEeCc-cCcCh-hhCC-HHHHHHHHHH--HhCCC---CcEEE
Confidence 5443 577 865554 6899999999999999999999987 33332 2344 4677777766 33322 23444
Q ss_pred EEeCCC-HHHH---HHHHHcCCCEEecCCCCCC----CchHH----HHHH-hcCCCEEEEcC
Q 038230 293 SVDTFY-SKVA---SEAVGKGAHIVNDVSAGQL----DPDMY----KVVA-GLKVPYVAMHM 341 (480)
Q Consensus 293 SIDT~~-~~v~---~aaL~~G~~iINdVsg~~~----d~~m~----~l~~-~~~~~vVlmh~ 341 (480)
.+=+.+ .+++ +.|-+.|+|-+--+...-. +++++ .++. ..+.|+++-+.
T Consensus 98 Gvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~ 159 (344)
T 2hmc_A 98 GTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNS 159 (344)
T ss_dssp ECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEB
T ss_pred ecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 554444 3333 3344569997776654211 23333 4454 46899998653
No 148
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=87.28 E-value=2.5 Score=40.18 Aligned_cols=88 Identities=14% Similarity=-0.066 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHcCCCE
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGKGAHI 312 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~G~~i 312 (480)
+.++.|+.+.+.||+.|-+-.. ++.+...-. ....++.+++. .++||-+.. .+++-++++++.|++-
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~-~~~~~~~g~-------~~~~i~~i~~~---~~iPvi~~ggi~~~~~i~~~~~~Gad~ 99 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSI-DRDGTKSGY-------DTEMIRFVRPL---TTLPIIASGGAGKMEHFLEAFLAGADK 99 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEET-TTSSCSSCC-------CHHHHHHHGGG---CCSCEEEESCCCSTHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHCCCCEEEEEec-CcccCCCcc-------cHHHHHHHHHh---cCCCEEEECCCCCHHHHHHHHHcCCcH
Confidence 4677889999999999988321 111111000 12344556655 478888854 3457788999999997
Q ss_pred EecCCCCC-C--Cc-hHHHHHHhcC
Q 038230 313 VNDVSAGQ-L--DP-DMYKVVAGLK 333 (480)
Q Consensus 313 INdVsg~~-~--d~-~m~~l~~~~~ 333 (480)
+---+... . ++ .+.++++.++
T Consensus 100 v~lg~~~~~~~~~~~~~~~~~~~~g 124 (266)
T 2w6r_A 100 ALAASVFHFREIDMRELKEYLKKHG 124 (266)
T ss_dssp EECCCCC------CHHHHHHCC---
T ss_pred hhhhHHHHhCCCCHHHHHHHHHHcC
Confidence 65444432 1 33 3555555565
No 149
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=87.14 E-value=6 Score=39.19 Aligned_cols=136 Identities=16% Similarity=0.211 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGA 310 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~ 310 (480)
.+.+++++.+++..+.|+.-|-+.+. ..|.. ....+++..+++.+++... ..+-++.+..+.+.+++-.++|+
T Consensus 91 ls~eei~~~~~~~~~~G~~~i~l~gG-e~p~~-----~~~~~~~~~l~~~ik~~~~-i~i~~s~g~~~~e~l~~L~~aG~ 163 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAGFHMVDLTMG-EDPYY-----YEDPNRFVELVQIVKEELG-LPIMISPGLMDNATLLKAREKGA 163 (350)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEEEEC-CCHHH-----HHSTHHHHHHHHHHHHHHC-SCEEEECSSCCHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeeC-CCCcc-----ccCHHHHHHHHHHHHhhcC-ceEEEeCCCCCHHHHHHHHHcCC
Confidence 69999999999999999998887431 11210 0124556667777775321 13334556678888888888898
Q ss_pred CEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCC
Q 038230 311 HIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGL 390 (480)
Q Consensus 311 ~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgi 390 (480)
+.++ ++....++++++.+.. + .+ + +...+.++.+.++|+. +-.+-.+
T Consensus 164 ~~i~-i~lEt~~~~~~~~i~~-----------~--~~--------~--------~~~l~~i~~a~~~Gi~---v~~~~i~ 210 (350)
T 3t7v_A 164 NFLA-LYQETYDTELYRKLRV-----------G--QS--------F--------DGRVNARRFAKQQGYC---VEDGILT 210 (350)
T ss_dssp EEEE-CCCBCSCHHHHHHHST-----------T--CC--------H--------HHHHHHHHHHHHHTCE---EEEEEEE
T ss_pred CEEE-EeeecCCHHHHHHhCC-----------C--CC--------H--------HHHHHHHHHHHHcCCe---EccceEe
Confidence 8776 5545445676655421 0 00 1 2233567788889994 7777667
Q ss_pred CCccChhHHHHHHHhc
Q 038230 391 GFSKKAEHNLDILLGL 406 (480)
Q Consensus 391 Gf~k~~~~~~~~lr~l 406 (480)
|++.+.++-.+.++.+
T Consensus 211 Glget~e~~~~~l~~l 226 (350)
T 3t7v_A 211 GVGNDIESTILSLRGM 226 (350)
T ss_dssp SSSCCHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHHH
Confidence 7777776655555554
No 150
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=87.01 E-value=5.6 Score=38.88 Aligned_cols=113 Identities=18% Similarity=0.245 Sum_probs=69.2
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHH-HHHHHHcCCcCCCCeEEEeCC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIP-VLEAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~-vi~~l~~~~~~~~~pISIDT~ 297 (480)
+|| |-+. -.|.+...++++.++++|+|-|=++| ||.-+ ...+. +|..++.. +++..... ..+.+.+=+.
T Consensus 12 vTP--f~~d--~iD~~~l~~lv~~li~~Gv~gl~v~G-ttGE~-~~Lt~-~Er~~v~~~~~~~~~gr---vpviaGvg~~ 81 (292)
T 3daq_A 12 TTP--FTNN--KVNLEALKAHVNFLLENNAQAIIVNG-TTAES-PTLTT-DEKELILKTVIDLVDKR---VPVIAGTGTN 81 (292)
T ss_dssp CCC--EETT--EECHHHHHHHHHHHHHTTCCEEEESS-GGGTG-GGSCH-HHHHHHHHHHHHHHTTS---SCEEEECCCS
T ss_pred ecC--cCCC--CcCHHHHHHHHHHHHHcCCCEEEECc-ccccc-ccCCH-HHHHHHHHHHHHHhCCC---CcEEEeCCcc
Confidence 577 7655 58999999999999999999999987 34332 23454 55555554 44444332 2344555444
Q ss_pred CHHHH----HHHHHcCCCEEecCCCCCC--C-ch----HHHHHHhcCCCEEEEcC
Q 038230 298 YSKVA----SEAVGKGAHIVNDVSAGQL--D-PD----MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 298 ~~~v~----~aaL~~G~~iINdVsg~~~--d-~~----m~~l~~~~~~~vVlmh~ 341 (480)
+.+.+ +.|-+.|+|-+--+...-. . ++ .-.++...+.|+++-+.
T Consensus 82 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~ 136 (292)
T 3daq_A 82 DTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNV 136 (292)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEEC
T ss_pred cHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEec
Confidence 44332 2344459997776654211 1 23 33444556999998764
No 151
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=86.93 E-value=0.63 Score=50.78 Aligned_cols=105 Identities=14% Similarity=0.150 Sum_probs=68.3
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCC---CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQS---TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD 295 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eS---trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID 295 (480)
++|+.|.++| .+.+++++.|+.+.+.|+|+|++++.. ..|....-.... ...+.++.+++. .++||..-
T Consensus 215 ls~~~~~~~g--~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~---~~iPvi~~ 286 (671)
T 1ps9_A 215 LSMLDLVEDG--GTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRG---AFSWVTRKLKGH---VSLPLVTT 286 (671)
T ss_dssp EEEECCSTTC--CCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTT---TTHHHHHHHTTS---CSSCEEEC
T ss_pred ECccccCCCC--CCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcc---hHHHHHHHHHHh---cCceEEEe
Confidence 3455555665 478899999999999999999997421 112100000000 112345667765 47787764
Q ss_pred C--CCHHHHHHHHHcC-CCEEecCCCCCCCchHHHHHHh
Q 038230 296 T--FYSKVASEAVGKG-AHIVNDVSAGQLDPDMYKVVAG 331 (480)
Q Consensus 296 T--~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l~~~ 331 (480)
- ++++.++++|+.| +|+|.=.++.-.+|.+..-+++
T Consensus 287 Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~ 325 (671)
T 1ps9_A 287 NRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQS 325 (671)
T ss_dssp SSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHT
T ss_pred CCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHc
Confidence 3 5899999999998 9999866665456777666554
No 152
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=86.91 E-value=3.2 Score=38.82 Aligned_cols=97 Identities=14% Similarity=0.110 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHcCCc-CCCCeEEEeCCCHHHHHHHHHcC
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQ--STRPMATKISAEKELERLIPVLEAVLTMPE-MEGKLVSVDTFYSKVASEAVGKG 309 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~e--StrP~a~~v~~~eE~~rl~~vi~~l~~~~~-~~~~pISIDT~~~~v~~aaL~~G 309 (480)
.....+.++.+.+.|||+|-++.. +..|+.. ... +.++.|++... ..++.+.++- ..+-++.++++|
T Consensus 18 ~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~-~~~--------~~~~~lr~~~~~~~~v~lmv~d-~~~~i~~~~~ag 87 (228)
T 1h1y_A 18 FANLAAEADRMVRLGADWLHMDIMDGHFVPNLT-IGA--------PVIQSLRKHTKAYLDCHLMVTN-PSDYVEPLAKAG 87 (228)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBC-BCH--------HHHHHHHTTCCSEEEEEEESSC-GGGGHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecCCcCcchh-hCH--------HHHHHHHhhcCCcEEEEEEecC-HHHHHHHHHHcC
Confidence 344556677778899998655421 2223321 111 33455555421 0134455532 233588888899
Q ss_pred CCEE--ecCCCCCCC-chHHHHHHhcCCCEEEEc
Q 038230 310 AHIV--NDVSAGQLD-PDMYKVVAGLKVPYVAMH 340 (480)
Q Consensus 310 ~~iI--NdVsg~~~d-~~m~~l~~~~~~~vVlmh 340 (480)
++.| -+-... .. .+.++.++++|..+.+.-
T Consensus 88 ad~v~vH~~~~~-~~~~~~~~~i~~~g~~igv~~ 120 (228)
T 1h1y_A 88 ASGFTFHIEVSR-DNWQELIQSIKAKGMRPGVSL 120 (228)
T ss_dssp CSEEEEEGGGCT-TTHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEECCCCcc-cHHHHHHHHHHHcCCCEEEEE
Confidence 9988 433221 13 455778888888777544
No 153
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=86.88 E-value=0.65 Score=47.14 Aligned_cols=107 Identities=18% Similarity=0.135 Sum_probs=66.3
Q ss_pred CCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--
Q 038230 220 TPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMAT-KISAEKELERLIPVLEAVLTMPEMEGKLVSVDT-- 296 (480)
Q Consensus 220 tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~-~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT-- 296 (480)
+|+-|.+||. .+.+++++.|+.+.+.|+|+|++-.....+... +..+... .+.++.+++. .++||..--
T Consensus 233 s~~~~~~~G~-~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~----~~~~~~ir~~---~~iPVi~~GgI 304 (363)
T 3l5l_A 233 GVLEYDGRDE-QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFM----GPIAERVRRE---AKLPVTSAWGF 304 (363)
T ss_dssp EEECSSSCHH-HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTT----HHHHHHHHHH---HTCCEEECSST
T ss_pred cchhcCCCCC-CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchh----HHHHHHHHHH---cCCcEEEeCCC
Confidence 4566777763 467899999999999999999996532222110 0011001 1234444543 256666543
Q ss_pred CCHHHHHHHHHcC-CCEEecCCCCCCCchHH-HHHHhcCC
Q 038230 297 FYSKVASEAVGKG-AHIVNDVSAGQLDPDMY-KVVAGLKV 334 (480)
Q Consensus 297 ~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~-~l~~~~~~ 334 (480)
++++.++++|+.| +|+|-=-++.-.+|.+. ++++++++
T Consensus 305 ~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~lg~ 344 (363)
T 3l5l_A 305 GTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAKELGV 344 (363)
T ss_dssp TSHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHTTC
T ss_pred CCHHHHHHHHHCCCccEEEecHHHHhCchHHHHHHHHcCC
Confidence 4799999999998 99986444433466655 44445653
No 154
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=86.75 E-value=5.8 Score=39.11 Aligned_cols=114 Identities=20% Similarity=0.187 Sum_probs=68.4
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHcCCcCCCCeEEEeC
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLE-AVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~-~l~~~~~~~~~pISIDT 296 (480)
-+|| |.| | -.|.+...+.++.++++|++-|-++| ||.-+ ...+. +|..++...+. ..... ..+...+=+
T Consensus 21 ~vTP--f~d-g-~iD~~~l~~lv~~li~~Gv~gl~v~G-tTGE~-~~Ls~-eEr~~vi~~~~~~~~gr---vpViaGvg~ 90 (306)
T 1o5k_A 21 IVTP--FKN-G-ELDLESYERLVRYQLENGVNALIVLG-TTGES-PTVNE-DEREKLVSRTLEIVDGK---IPVIVGAGT 90 (306)
T ss_dssp CCCC--EET-T-EECHHHHHHHHHHHHHTTCCEEEESS-GGGTG-GGCCH-HHHHHHHHHHHHHHTTS---SCEEEECCC
T ss_pred eecC--cCC-C-CcCHHHHHHHHHHHHHcCCCEEEeCc-cccch-hhCCH-HHHHHHHHHHHHHhCCC---CeEEEcCCC
Confidence 3688 763 3 36899999999999999999999987 33332 23554 55665555443 33322 133344444
Q ss_pred CC-HHHH---HHHHHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEcC
Q 038230 297 FY-SKVA---SEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 297 ~~-~~v~---~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh~ 341 (480)
.+ .+++ +.|-+.|+|-+--+...-. .++++ .++...+.|+++-+.
T Consensus 91 ~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 146 (306)
T 1o5k_A 91 NSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNV 146 (306)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEEC
T ss_pred ccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 34 3333 3344569997766654211 13333 455557899998664
No 155
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=86.75 E-value=5.8 Score=38.77 Aligned_cols=112 Identities=19% Similarity=0.208 Sum_probs=68.8
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE--EeC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS--VDT 296 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS--IDT 296 (480)
+|| |.| | -.|.+...++++.++++|+|-|-++| ||.-+ ...+. +|..++...+.....- .+||- +=+
T Consensus 10 vTP--f~d-g-~iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~-~~Ls~-~Er~~v~~~~~~~~~g----rvpviaGvg~ 78 (294)
T 2ehh_A 10 ITP--FKE-G-EVDYEALGNLIEFHVDNGTDAILVCG-TTGES-PTLTF-EEHEKVIEFAVKRAAG----RIKVIAGTGG 78 (294)
T ss_dssp CCC--EET-T-EECHHHHHHHHHHHHTTTCCEEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHHTT----SSEEEEECCC
T ss_pred ecC--cCC-C-CcCHHHHHHHHHHHHHCCCCEEEECc-cccCh-hhCCH-HHHHHHHHHHHHHhCC----CCcEEEecCC
Confidence 688 764 3 36899999999999999999999987 44433 23554 5565555444333221 35554 433
Q ss_pred CC-HHHH---HHHHHcCCCEEecCCCCCC---CchHH----HHHHhcCCCEEEEcC
Q 038230 297 FY-SKVA---SEAVGKGAHIVNDVSAGQL---DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 297 ~~-~~v~---~aaL~~G~~iINdVsg~~~---d~~m~----~l~~~~~~~vVlmh~ 341 (480)
.+ .+++ +.|-+.|+|-+--+...-. +++++ .++...+.|+++-+.
T Consensus 79 ~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 134 (294)
T 2ehh_A 79 NATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNI 134 (294)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 33 3333 4445569997766654211 13333 455567899998664
No 156
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=86.62 E-value=4.1 Score=40.97 Aligned_cols=97 Identities=24% Similarity=0.299 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCC---C--CCCC-CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQ---S--TRPM-ATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASE 304 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~e---S--trP~-a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~a 304 (480)
.+.+++.+.++++++.|++.|-+-+. . +.|. ...++ .+++++ +++..++. ++++.+=....+.++.
T Consensus 172 ~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~-~e~l~~---~~~~A~~~----g~~v~~H~~~~~~i~~ 243 (426)
T 2r8c_A 172 DGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYS-EDEIRA---IVAEAQGR----GTYVLAHAYTPAAIAR 243 (426)
T ss_dssp CSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSC-HHHHHH---HHHHHHHT----TCCEEEEECSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCC-HHHHHH---HHHHHHHc----CCEEEEEeCChHHHHH
Confidence 46788999999999999998887432 1 1121 12333 455554 45666665 8999999999999999
Q ss_pred HHHcCCCEEecCCCCCCCchHHHHHHhcCCCEE
Q 038230 305 AVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYV 337 (480)
Q Consensus 305 aL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vV 337 (480)
++++|++.|-=... .+++.++.+++.++.++
T Consensus 244 al~~G~~~i~H~~~--~~~~~~~~~~~~gv~~~ 274 (426)
T 2r8c_A 244 AVRCGVRTIEHGNL--IDDETARLVAEHGAYVV 274 (426)
T ss_dssp HHHTTCSEEEECTT--CCHHHHHHHHHTTCEEE
T ss_pred HHHcCCCEEecCCc--CCHHHHHHHHHcCCeEe
Confidence 99999987754432 36888999999998875
No 157
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=86.59 E-value=7.1 Score=38.57 Aligned_cols=112 Identities=19% Similarity=0.173 Sum_probs=68.6
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEE--E
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVS--V 294 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pIS--I 294 (480)
=+|| |-+.|. .|.+...+.++.++++|+|-|=++| ||.-+ ...+. +|..++...+ +.. . ++||- +
T Consensus 16 ~vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~-~~Lt~-~Er~~v~~~~v~~~-g-----rvpViaGv 83 (313)
T 3dz1_A 16 APTP--FHDDGK-IDDVSIDRLTDFYAEVGCEGVTVLG-ILGEA-PKLDA-AEAEAVATRFIKRA-K-----SMQVIVGV 83 (313)
T ss_dssp CCCC--BCTTSC-BCHHHHHHHHHHHHHTTCSEEEEST-GGGTG-GGSCH-HHHHHHHHHHHHHC-T-----TSEEEEEC
T ss_pred eeCC--CCCCCC-cCHHHHHHHHHHHHHCCCCEEEeCc-cCcCh-hhCCH-HHHHHHHHHHHHHc-C-----CCcEEEec
Confidence 3577 866554 7899999999999999999999987 44433 23454 5566555443 333 2 45544 4
Q ss_pred eCCCHHH-H---HHHHHcCCCEEecCCCCCC--Cch----HHHHHHhcC--CCEEEEcC
Q 038230 295 DTFYSKV-A---SEAVGKGAHIVNDVSAGQL--DPD----MYKVVAGLK--VPYVAMHM 341 (480)
Q Consensus 295 DT~~~~v-~---~aaL~~G~~iINdVsg~~~--d~~----m~~l~~~~~--~~vVlmh~ 341 (480)
=+.+.+. + +.|-+.|+|-+--+..... +++ .-.++...+ .|+++-+.
T Consensus 84 g~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~ 142 (313)
T 3dz1_A 84 SAPGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDY 142 (313)
T ss_dssp CCSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 3333332 2 3444459997776654321 122 334444567 99998664
No 158
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=86.51 E-value=3.8 Score=40.89 Aligned_cols=59 Identities=19% Similarity=0.121 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCC-----------C--CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQS-----------T--RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD 295 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eS-----------t--rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID 295 (480)
++..+.|+...++|.|.|+|++.- + |...-.-+.+...+.+..+++++++.. +.||+|.
T Consensus 144 ~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v---~~pv~vr 215 (338)
T 1z41_A 144 QEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW---DGPLFVR 215 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC---CSCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc---CCcEEEE
Confidence 344567788889999999998631 1 221112345667788889999998763 6676665
No 159
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=86.36 E-value=18 Score=36.65 Aligned_cols=94 Identities=13% Similarity=0.088 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHH--
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEA-- 305 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aa-- 305 (480)
.++++..+.|+++++.|.+.+.+.... +.+++++++. ++++... .+++|.||. ++++.+.+.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~iKiKvG~--------~~~~d~~~v~----avR~a~g-~d~~l~vDan~~~~~~~A~~~~~ 216 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQGFTAAKLKVGR--------APRKDAANLR----AMRQRVG-ADVEILVDANQSLGRHDALAMLR 216 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS--------CHHHHHHHHH----HHHHHHC-TTSEEEEECTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEeeccCC--------CHHHHHHHHH----HHHHHcC-CCceEEEECCCCcCHHHHHHHHH
Confidence 578999999999999999999987421 4566677654 4443211 378999995 455544333
Q ss_pred -HH-cCCCEEecCCCCCCC-chHHHHH-HhcCCCEEE
Q 038230 306 -VG-KGAHIVNDVSAGQLD-PDMYKVV-AGLKVPYVA 338 (480)
Q Consensus 306 -L~-~G~~iINdVsg~~~d-~~m~~l~-~~~~~~vVl 338 (480)
|+ .|..+|-.-.... + +.+..+. +..++|++.
T Consensus 217 ~l~~~~i~~iEqP~~~~-d~~~~~~l~~~~~~iPIa~ 252 (389)
T 3ozy_A 217 ILDEAGCYWFEEPLSID-DIEGHRILRAQGTPVRIAT 252 (389)
T ss_dssp HHHHTTCSEEESCSCTT-CHHHHHHHHTTCCSSEEEE
T ss_pred HHHhcCCCEEECCCCcc-cHHHHHHHHhcCCCCCEEe
Confidence 32 4899997654322 3 4566676 667888776
No 160
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=86.36 E-value=13 Score=36.70 Aligned_cols=131 Identities=11% Similarity=0.197 Sum_probs=76.0
Q ss_pred HHHHHHcCC-CEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC-----HHHHHHHHHcCCCEE
Q 038230 240 VRLMISEGA-DMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY-----SKVASEAVGKGAHIV 313 (480)
Q Consensus 240 A~~~v~~GA-diIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~-----~~v~~aaL~~G~~iI 313 (480)
+....++|+ .+|-.+. ++. +++... ++.+++. ++.|+.+.-+- .+.++.++++|++.|
T Consensus 29 a~av~~aG~lG~i~~~~---------~~~-~~~~~~---i~~i~~~---~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V 92 (332)
T 2z6i_A 29 AGAVSKAGGLGIIGGGN---------APK-EVVKAN---IDKIKSL---TDKPFGVNIMLLSPFVEDIVDLVIEEGVKVV 92 (332)
T ss_dssp HHHHHHHTSBEEEECTT---------CCH-HHHHHH---HHHHHHH---CCSCEEEEECTTSTTHHHHHHHHHHTTCSEE
T ss_pred HHHHHhCCCcEEeCCCC---------CCH-HHHHHH---HHHHHHh---cCCCEEEEecCCCCCHHHHHHHHHHCCCCEE
Confidence 344556687 6664432 233 333333 3444433 24566665443 677888999999998
Q ss_pred ecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecC-CCC
Q 038230 314 NDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPG-LGF 392 (480)
Q Consensus 314 NdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg-iGf 392 (480)
- +.++. ..++++.+++++.++++--. + .+.+..+.+.|++ -|+++.. .|.
T Consensus 93 ~-~~~g~-p~~~i~~l~~~g~~v~~~v~-----~--------------------~~~a~~~~~~GaD--~i~v~g~~~GG 143 (332)
T 2z6i_A 93 T-TGAGN-PSKYMERFHEAGIIVIPVVP-----S--------------------VALAKRMEKIGAD--AVIAEGMEAGG 143 (332)
T ss_dssp E-ECSSC-GGGTHHHHHHTTCEEEEEES-----S--------------------HHHHHHHHHTTCS--CEEEECTTSSE
T ss_pred E-ECCCC-hHHHHHHHHHcCCeEEEEeC-----C--------------------HHHHHHHHHcCCC--EEEEECCCCCC
Confidence 6 44432 36788888888887775221 0 0223456678976 7999852 121
Q ss_pred ccChhHHHHHHHhc-ccCCCcEEE
Q 038230 393 SKKAEHNLDILLGL-AASHAPILI 415 (480)
Q Consensus 393 ~k~~~~~~~~lr~l-~~~g~Pil~ 415 (480)
......++++++++ +..++|++.
T Consensus 144 ~~g~~~~~~ll~~i~~~~~iPVia 167 (332)
T 2z6i_A 144 HIGKLTTMTLVRQVATAISIPVIA 167 (332)
T ss_dssp ECCSSCHHHHHHHHHHHCSSCEEE
T ss_pred CCCCccHHHHHHHHHHhcCCCEEE
Confidence 11123456777777 356889876
No 161
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=86.31 E-value=1.9 Score=43.04 Aligned_cols=105 Identities=14% Similarity=0.186 Sum_probs=66.5
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD-- 295 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID-- 295 (480)
=++|+.|..|| .+.+++++.|+.+.+.|+|+|++......+...+..+...+ +.++.+++. .++||..-
T Consensus 215 ris~~~~~~~g--~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~----~~~~~ir~~---~~iPVi~~Gg 285 (338)
T 1z41_A 215 RVSASDYTDKG--LDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQV----SFAEKIREQ---ADMATGAVGM 285 (338)
T ss_dssp EEECCCCSTTS--CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTH----HHHHHHHHH---HCCEEEECSS
T ss_pred EecCcccCCCC--CCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchH----HHHHHHHHH---CCCCEEEECC
Confidence 35677777766 46789999999999999999999753211100011111111 233444443 26777663
Q ss_pred CCCHHHHHHHHHcC-CCEEecCCCCCCCchHHHHHHh
Q 038230 296 TFYSKVASEAVGKG-AHIVNDVSAGQLDPDMYKVVAG 331 (480)
Q Consensus 296 T~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l~~~ 331 (480)
-++++.++++|+.| +|+|-=-++.-.+|.+..-+++
T Consensus 286 i~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~ 322 (338)
T 1z41_A 286 ITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAK 322 (338)
T ss_dssp CCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred CCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHc
Confidence 35799999999998 9999755554446766655443
No 162
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=86.27 E-value=3.3 Score=48.44 Aligned_cols=191 Identities=15% Similarity=0.104 Sum_probs=108.3
Q ss_pred cCCHHHHHHHHHHHHHcCCCE--EEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE-Ee--------C-C
Q 038230 230 FQSVEAAVSQVRLMISEGADM--IDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS-VD--------T-F 297 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdi--IDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS-ID--------T-~ 297 (480)
.++.++-++.|+.+.+.|.++ |+++|..+.|.+-....+.+|+++..+.+.+. +.++. +. | +
T Consensus 569 ~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~~~~~~~------~~~~~~l~R~~n~vg~~~~ 642 (1165)
T 2qf7_A 569 RMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAP------NLLLQMLLRGANGVGYTNY 642 (1165)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHHHHHHCT------TSEEEEEEETTTBTCSSCC
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHHHHHHch------hhHHHHHhccccccccccC
Confidence 378899999999999998887 99976666542100001245777766655543 23333 21 1 1
Q ss_pred ----CHHHHHHHHHcCCCEEecCCCCCCC---chHHHHHHhcCCCEE--EEcCC--CCCCccccccccchhhHHHHHHHH
Q 038230 298 ----YSKVASEAVGKGAHIVNDVSAGQLD---PDMYKVVAGLKVPYV--AMHMR--GDPSTMQNEENLQYDDVCKQVASE 366 (480)
Q Consensus 298 ----~~~v~~aaL~~G~~iINdVsg~~~d---~~m~~l~~~~~~~vV--lmh~~--g~p~~~~~~~~~~~~~v~~ev~~~ 366 (480)
..+-+++|+++|++++.=..+.+.- ....+.+++.|..+. ++... +.|... . + + .++
T Consensus 643 ~~~~~~~~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~----~--~-~-----~~~ 710 (1165)
T 2qf7_A 643 PDNVVKYFVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARP----K--Y-D-----LKY 710 (1165)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSG----G--G-C-----HHH
T ss_pred CchhHHHHHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCC----C--C-C-----HHH
Confidence 1245788999999986644443321 345677778885443 23221 222110 0 0 1 266
Q ss_pred HHHHHHHHHHCCCCCCCE-EEecCCCCccChhHHHHHHHhc-ccCCCcEEEeeccccccccccCCCCcCcccHHHHHHHH
Q 038230 367 LYSKVRDAELSGIPAWRI-IIDPGLGFSKKAEHNLDILLGL-AASHAPILIGPSRKRFLGEICNRPSADERDPATIASIT 444 (480)
Q Consensus 367 l~~~i~~a~~~Gi~~~~I-ilDPgiGf~k~~~~~~~~lr~l-~~~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~ 444 (480)
+.+.++.+.++|.. .| |-|- .|... +.+..++++.+ +..+.|+=+ |. .+-.+...|-+.
T Consensus 711 ~~~~~~~~~~~Ga~--~i~l~DT-~G~~~-P~~~~~lv~~l~~~~~~~i~~-H~--------------Hnd~GlAvAn~l 771 (1165)
T 2qf7_A 711 YTNLAVELEKAGAH--IIAVKDM-AGLLK-PAAAKVLFKALREATGLPIHF-HT--------------HDTSGIAAATVL 771 (1165)
T ss_dssp HHHHHHHHHHTTCS--EEEEEET-TCCCC-HHHHHHHHHHHHHHCSSCEEE-EE--------------CBTTSCHHHHHH
T ss_pred HHHHHHHHHHcCCC--EEEEeCc-cCCcC-HHHHHHHHHHHHHhcCCeEEE-EE--------------CCCCCHHHHHHH
Confidence 77888889999986 44 3343 34333 34445666666 234666533 11 111123344456
Q ss_pred HHHHcCCcEEEcC
Q 038230 445 AGVLGGANIVRVH 457 (480)
Q Consensus 445 ~a~~~Ga~IlRvH 457 (480)
.|++.||+++.+.
T Consensus 772 aAv~aGa~~vd~t 784 (1165)
T 2qf7_A 772 AAVEAGVDAVDAA 784 (1165)
T ss_dssp HHHHTTCSEEEEB
T ss_pred HHHHhCCCEEEec
Confidence 6788888888754
No 163
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=86.18 E-value=8.9 Score=38.12 Aligned_cols=148 Identities=10% Similarity=0.070 Sum_probs=81.9
Q ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCC----CCeEEE-eCCCHHHHHHHHHcCC
Q 038230 236 AVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEME----GKLVSV-DTFYSKVASEAVGKGA 310 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~----~~pISI-DT~~~~v~~aaL~~G~ 310 (480)
.++.++.|+++|||+|-+. .| -+..+|++.=.+.+.|-++.+.+..+.. ++|+.. ..-....++.-.+.|+
T Consensus 189 ~~~~~~~~~~aGad~i~i~-d~---~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~~g~~~~l~~l~~~g~ 264 (354)
T 3cyv_A 189 VTLYLNAQIKAGAQAVMIF-DT---WGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGC 264 (354)
T ss_dssp HHHHHHHHHHTTCSEEEEE-CT---TGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTTTTTHHHHHTTSC
T ss_pred HHHHHHHHHHhCCCEEEEe-CC---ccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEECCCHHHHHHHHHhcCC
Confidence 4567889999999999885 33 2346887665555666666655432211 255433 2222345666667899
Q ss_pred CEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCC
Q 038230 311 HIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGL 390 (480)
Q Consensus 311 ~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgi 390 (480)
+++| +.. .-.+.++.+.++-.++++-.- .|.... .+ .+++.+..++.++. .|- ....|+-||.
T Consensus 265 d~i~-~d~---~~dl~~~~~~~g~~~~l~Gn~-dp~~l~----~t----~e~i~~~v~~~l~~---~g~-~~g~I~~~g~ 327 (354)
T 3cyv_A 265 DALG-LDW---TTDIADARRRVGNKVALQGNM-DPSMLY----AP----PARIEEEVATILAG---FGH-GEGHVFNLGH 327 (354)
T ss_dssp SEEE-CCT---TSCHHHHHHHHTTTSEEECCB-CGGGGG----SC----HHHHHHHHHHHHTT---TTT-SSCEEBCBSS
T ss_pred CEEE-eCC---CCCHHHHHHHhCCCeEEEecC-ChHHhC----CC----HHHHHHHHHHHHHH---hCC-CCCeEEecCC
Confidence 9999 432 234556666677666665432 121111 11 22333333333332 253 2479999998
Q ss_pred CCcc-ChhHHHHHHH
Q 038230 391 GFSK-KAEHNLDILL 404 (480)
Q Consensus 391 Gf~k-~~~~~~~~lr 404 (480)
|... +..+|++.+-
T Consensus 328 gi~~~~p~env~a~v 342 (354)
T 3cyv_A 328 GIHQDVPPEHAGVFV 342 (354)
T ss_dssp CCCTTSCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHH
Confidence 8743 3455655443
No 164
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=86.17 E-value=5.7 Score=37.83 Aligned_cols=74 Identities=7% Similarity=-0.011 Sum_probs=38.0
Q ss_pred hHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC-CccChhHHHHH
Q 038230 324 DMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG-FSKKAEHNLDI 402 (480)
Q Consensus 324 ~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG-f~k~~~~~~~~ 402 (480)
+.++++++.|+++|++|....+.. ...++..+...+.+.+..+.|.+.|| +|.+-|.-+ |..+..+..++
T Consensus 112 ~~i~~A~~lG~~~v~~~~~~~~~~------~~~~~~~~~~~~~l~~l~~~a~~~Gv---~l~lEn~~~~~~~~~~~~~~l 182 (295)
T 3cqj_A 112 KAIQFAQDVGIRVIQLAGYDVYYQ------EANNETRRRFRDGLKESVEMASRAQV---TLAMEIMDYPLMNSISKALGY 182 (295)
T ss_dssp HHHHHHHHHTCCEEEECCCSCSSS------CCCHHHHHHHHHHHHHHHHHHHHHTC---EEEEECCSSGGGCSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCCcC------cCHHHHHHHHHHHHHHHHHHHHHhCC---EEEEeeCCCcccCCHHHHHHH
Confidence 456666777777776662211000 01123344455566666666666777 366666433 24444554555
Q ss_pred HHhc
Q 038230 403 LLGL 406 (480)
Q Consensus 403 lr~l 406 (480)
++.+
T Consensus 183 ~~~v 186 (295)
T 3cqj_A 183 AHYL 186 (295)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 5543
No 165
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=86.16 E-value=25 Score=35.13 Aligned_cols=97 Identities=13% Similarity=0.109 Sum_probs=63.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-+.|.|-... + +.++..+++ +++++... .+++|.||. ++++.+.+.++
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKik~g~--~-----~~~~~~e~v----~avr~a~G-~d~~l~vDan~~~~~~~a~~~~~ 212 (371)
T 2ovl_A 145 LPVADLKTQADRFLAGGFRAIKMKVGR--P-----DLKEDVDRV----SALREHLG-DSFPLMVDANMKWTVDGAIRAAR 212 (371)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCC--S-----SHHHHHHHH----HHHHHHHC-TTSCEEEECTTCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCC--C-----CHHHHHHHH----HHHHHHhC-CCCeEEEECCCCCCHHHHHHHHH
Confidence 478899999999999999999986421 1 344455544 44444321 278999995 35554433332
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
+|.++|-+-.....-+.+..+.+..++|++.-
T Consensus 213 ~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~d 248 (371)
T 2ovl_A 213 ALAPFDLHWIEEPTIPDDLVGNARIVRESGHTIAGG 248 (371)
T ss_dssp HHGGGCCSEEECCSCTTCHHHHHHHHHHHCSCEEEC
T ss_pred HHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeC
Confidence 49999976543221256777777788998873
No 166
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=85.95 E-value=2.6 Score=39.12 Aligned_cols=90 Identities=19% Similarity=0.078 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcCCC
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKGAH 311 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G~~ 311 (480)
++.++.++.+.+.|||.|-+-... ..+ -. .......++.+++. .++|+.+. -.+++.+++++++|++
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~-~~~---~~----~~~~~~~i~~i~~~---~~ipvi~~g~i~~~~~~~~~~~~Gad 101 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDIT-AAP---EG----RATFIDSVKRVAEA---VSIPVLVGGGVRSLEDATTLFRAGAD 101 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECC-CCT---TT----HHHHHHHHHHHHHH---CSSCEEEESSCCSHHHHHHHHHHTCS
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCC-ccc---cC----CcccHHHHHHHHHh---cCCCEEEECCCCCHHHHHHHHHcCCC
Confidence 457888999999999955442111 100 01 11233456666654 36777664 4678889999999999
Q ss_pred EEecCCCCCCCch-HHHHHHhcCC
Q 038230 312 IVNDVSAGQLDPD-MYKVVAGLKV 334 (480)
Q Consensus 312 iINdVsg~~~d~~-m~~l~~~~~~ 334 (480)
.|-=-+....+++ +.+++++++.
T Consensus 102 ~V~i~~~~~~~~~~~~~~~~~~g~ 125 (253)
T 1h5y_A 102 KVSVNTAAVRNPQLVALLAREFGS 125 (253)
T ss_dssp EEEESHHHHHCTHHHHHHHHHHCG
T ss_pred EEEEChHHhhCcHHHHHHHHHcCC
Confidence 7752221111344 5566777774
No 167
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=85.79 E-value=2.1 Score=43.57 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCE
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHI 312 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~i 312 (480)
+...++++..+++|+|+|.|...- +. + + .+...|+.+++.. .++||.. .-..++.++.+.++|+|.
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~---G~---~--~---~~~e~I~~ir~~~--~~~~Vi~G~V~T~e~A~~a~~aGaD~ 165 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAH---AH---A--K---YVGKTLKSLRQLL--GSRCIMAGNVATYAGADYLASCGADI 165 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSC---CS---S--H---HHHHHHHHHHHHH--TTCEEEEEEECSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC---CC---c--H---hHHHHHHHHHHhc--CCCeEEEcCcCCHHHHHHHHHcCCCE
Confidence 457788999999999999996421 11 1 1 2334456666542 2678888 778899999999999998
Q ss_pred Ee
Q 038230 313 VN 314 (480)
Q Consensus 313 IN 314 (480)
|-
T Consensus 166 I~ 167 (361)
T 3r2g_A 166 IK 167 (361)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 168
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=85.78 E-value=6.1 Score=39.90 Aligned_cols=94 Identities=13% Similarity=0.122 Sum_probs=64.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHH--
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEA-- 305 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aa-- 305 (480)
.++++..+.|++++++|-+.|.|.... + .+....+|+++++... +++|.||. ++++.+.+.
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~--------~----~~~~~e~v~avr~a~g--d~~l~vD~n~~~~~~~a~~~~~ 211 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR--------G----EKLDLEITAAVRGEIG--DARLRLDANEGWSVHDAINMCR 211 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS--------C----HHHHHHHHHHHHTTST--TCEEEEECTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC--------C----HHHHHHHHHHHHHHcC--CcEEEEecCCCCCHHHHHHHHH
Confidence 467888999999999999999996421 2 2333455778887743 68999994 455544333
Q ss_pred -HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 306 -VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 306 -L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
|+ +|.++|.+-.....-+.+..+.+..++||+.
T Consensus 212 ~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPI~~ 246 (384)
T 2pgw_A 212 KLEKYDIEFIEQPTVSWSIPAMAHVREKVGIPIVA 246 (384)
T ss_dssp HHGGGCCSEEECCSCTTCHHHHHHHHHHCSSCEEE
T ss_pred HHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEE
Confidence 32 4999998765332125667777778899886
No 169
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=85.73 E-value=3.2 Score=39.59 Aligned_cols=86 Identities=15% Similarity=0.066 Sum_probs=58.4
Q ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecC
Q 038230 237 VSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDV 316 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdV 316 (480)
.++++..+++||++|-.++ . + . ++++..++. ++|+.-+...|+.+.+|+++|+++|.-.
T Consensus 96 ~~~a~~Ai~AGA~fIvsP~------~---~--~------~vi~~~~~~----gi~~ipGv~TptEi~~A~~~Gad~vK~F 154 (232)
T 4e38_A 96 GEQALAAKEAGATFVVSPG------F---N--P------NTVRACQEI----GIDIVPGVNNPSTVEAALEMGLTTLKFF 154 (232)
T ss_dssp HHHHHHHHHHTCSEEECSS------C---C--H------HHHHHHHHH----TCEEECEECSHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCC------C---C--H------HHHHHHHHc----CCCEEcCCCCHHHHHHHHHcCCCEEEEC
Confidence 3578889999999996543 2 1 1 234444553 7899999999999999999999999865
Q ss_pred CCCCC-CchHHHHHHh-cCCCEEEEcCCCC
Q 038230 317 SAGQL-DPDMYKVVAG-LKVPYVAMHMRGD 344 (480)
Q Consensus 317 sg~~~-d~~m~~l~~~-~~~~vVlmh~~g~ 344 (480)
-+... -+++++-++. +. .+=+|+..|+
T Consensus 155 Pa~~~gG~~~lkal~~p~p-~ip~~ptGGI 183 (232)
T 4e38_A 155 PAEASGGISMVKSLVGPYG-DIRLMPTGGI 183 (232)
T ss_dssp STTTTTHHHHHHHHHTTCT-TCEEEEBSSC
T ss_pred cCccccCHHHHHHHHHHhc-CCCeeeEcCC
Confidence 54332 2455555544 32 2345577775
No 170
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=85.60 E-value=6.2 Score=40.46 Aligned_cols=105 Identities=8% Similarity=0.101 Sum_probs=70.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHH--
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEA-- 305 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aa-- 305 (480)
.++++..+.|++++++|-..|-+-+ .|.....+..+++++-...++++++... .+++|.+|.. +++.+.+.
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl~G---~~~~~~~~~~~~~~~d~e~v~avR~avG-~d~~L~vDaN~~~~~~~A~~~~~ 199 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKLNG---CEEMGIIDTSRAVDAAVARVAEIRSAFG-NTVEFGLDFHGRVSAPMAKVLIK 199 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEES---CCSSSCBCSHHHHHHHHHHHHHHHHTTG-GGSEEEEECCSCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEec---CCcccccccchhHHHHHHHHHHHHHHhC-CCceEEEECCCCCCHHHHHHHHH
Confidence 5789999999999999999999822 1222223334556666667788887642 3789999964 45544333
Q ss_pred -HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 306 -VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 306 -L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
|+ .|..+|-+-......+.+..+.+..++|+++-
T Consensus 200 ~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~d 235 (405)
T 3rr1_A 200 ELEPYRPLFIEEPVLAEQAETYARLAAHTHLPIAAG 235 (405)
T ss_dssp HHGGGCCSCEECSSCCSSTHHHHHHHTTCSSCEEEC
T ss_pred HHHhcCCCEEECCCCcccHHHHHHHHhcCCCCEEec
Confidence 33 38888876543322356777777788888863
No 171
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=85.33 E-value=18 Score=35.59 Aligned_cols=111 Identities=16% Similarity=0.151 Sum_probs=67.3
Q ss_pred HHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC-------CHH----HHHHHHHc
Q 038230 240 VRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF-------YSK----VASEAVGK 308 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~-------~~~----v~~aaL~~ 308 (480)
+++.++.|||.|++-.- .+++ ...+-++.+..++++..+. ++|+-+-++ +++ .++.|.+.
T Consensus 131 ve~Av~~GAdaV~~~i~---~Gs~--~~~~~l~~i~~v~~~a~~~----GlpvIie~~~G~~~~~d~e~i~~aariA~el 201 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVY---IGSE--YEHQSIKNIIQLVDAGMKV----GMPTMAVTGVGKDMVRDQRYFSLATRIAAEM 201 (295)
T ss_dssp HHHHHHTTCSEEEEEEC---TTST--THHHHHHHHHHHHHHHHTT----TCCEEEEECC----CCSHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCEEEEEEE---CCCC--cHHHHHHHHHHHHHHHHHc----CCEEEEECCCCCccCCCHHHHHHHHHHHHHh
Confidence 34445899999997532 1211 1334455566666666654 788888543 355 34566678
Q ss_pred CCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCC
Q 038230 309 GAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIP 380 (480)
Q Consensus 309 G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~ 380 (480)
|+|+|- ++. . .+.|-++++...+|||+ ..|...+. +.+.+.+..+.++|..
T Consensus 202 GAD~VK-t~~-t-~e~~~~vv~~~~vPVv~--~GG~~~~~----------------~~~l~~v~~ai~aGA~ 252 (295)
T 3glc_A 202 GAQIIK-TYY-V-EKGFERIVAGCPVPIVI--AGGKKLPE----------------REALEMCWQAIDQGAS 252 (295)
T ss_dssp TCSEEE-EEC-C-TTTHHHHHHTCSSCEEE--ECCSCCCH----------------HHHHHHHHHHHHTTCS
T ss_pred CCCEEE-eCC-C-HHHHHHHHHhCCCcEEE--EECCCCCH----------------HHHHHHHHHHHHhCCe
Confidence 999986 332 2 24677777777888875 44443221 2345667777788885
No 172
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=85.27 E-value=4.2 Score=41.12 Aligned_cols=105 Identities=15% Similarity=0.157 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCCC-------------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-----
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQS-------------TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV----- 294 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~eS-------------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI----- 294 (480)
.++..+.|+..+++|+|.|+|++.- .|...-.-|.+...+.+..+++++++... .+ ||+|
T Consensus 160 i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg-~~-~v~vrls~~ 237 (364)
T 1vyr_A 160 VNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWS-AD-RIGIRVSPI 237 (364)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSC-GG-GEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcC-CC-cEEEEEccc
Confidence 4566677888889999999997631 12111123456677788889999998642 13 7777
Q ss_pred eCCC--------HH----HHHHHHHcCCCEEecCCCC-----CCCchHH-HHHHhcCCCEEEE
Q 038230 295 DTFY--------SK----VASEAVGKGAHIVNDVSAG-----QLDPDMY-KVVAGLKVPYVAM 339 (480)
Q Consensus 295 DT~~--------~~----v~~aaL~~G~~iINdVsg~-----~~d~~m~-~l~~~~~~~vVlm 339 (480)
|.+. .+ .++++-++|+++|.-..+. ....+++ .+.+..+.+|+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~ 300 (364)
T 1vyr_A 238 GTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGA 300 (364)
T ss_dssp SCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEE
T ss_pred cccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEE
Confidence 5332 22 3555556799999855421 1122333 3444567887764
No 173
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=85.21 E-value=2.9 Score=44.13 Aligned_cols=66 Identities=12% Similarity=0.117 Sum_probs=48.0
Q ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCEEe
Q 038230 236 AVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~iIN 314 (480)
..++++.++++|||+|.|+..-..| +....+++.+++.. .++||.+ +...++.++.+.++|++.|.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~-----------~~~~~~i~~i~~~~--~~~pvi~~~v~t~~~a~~l~~aGad~I~ 322 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNS-----------VYQIAMVHYIKQKY--PHLQVIGGNVVTAAQAKNLIDAGVDGLR 322 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCS-----------HHHHHHHHHHHHHC--TTCEEEEEEECSHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcc-----------hhHHHHHHHHHHhC--CCCceEecccchHHHHHHHHHcCCCEEE
Confidence 5678888999999999997532111 12334566666652 2678775 67889999999999999885
No 174
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=85.10 E-value=8.4 Score=38.55 Aligned_cols=103 Identities=21% Similarity=0.178 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHcCCCEEEeCCC---------CC----CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE----eCC
Q 038230 235 AAVSQVRLMISEGADMIDIGAQ---------ST----RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV----DTF 297 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~e---------St----rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI----DT~ 297 (480)
+-.+.|+...++|.|.|+|.+. |. |...-.-|.+...+.+..+|+++++.. +.||+| +.+
T Consensus 145 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v---~~pv~vRls~~~~ 221 (340)
T 3gr7_A 145 AFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW---DGPLFVRISASDY 221 (340)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC---CSCEEEEEESCCC
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc---CCceEEEeccccc
Confidence 4445677788899999999975 22 222113456667777889999998763 555444 321
Q ss_pred --------C-HHHHHHHHHcCCCEEecCCCCCC----------CchHHHHH-HhcCCCEEEEc
Q 038230 298 --------Y-SKVASEAVGKGAHIVNDVSAGQL----------DPDMYKVV-AGLKVPYVAMH 340 (480)
Q Consensus 298 --------~-~~v~~aaL~~G~~iINdVsg~~~----------d~~m~~l~-~~~~~~vVlmh 340 (480)
+ .+++++.-++|+++|.=.++... .-+++..+ +..+.+|+..-
T Consensus 222 ~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~G 284 (340)
T 3gr7_A 222 HPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVG 284 (340)
T ss_dssp STTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEES
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeC
Confidence 1 34455555579999884433211 11233333 34678877643
No 175
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=85.01 E-value=23 Score=35.52 Aligned_cols=143 Identities=12% Similarity=0.011 Sum_probs=83.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHH-
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVG- 307 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~- 307 (480)
++++..+.|++++++|-+.|.|.+.. +.+. ...+++++++... .+++|.+|. ++++.+.+.++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~--------~~~~----~~e~v~avr~a~g-~d~~l~vDan~~~~~~~a~~~~~~ 211 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGA--------DWQS----DIDRIRACLPLLE-PGEKAMADANQGWRVDNAIRLARA 211 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCS--------CHHH----HHHHHHHHGGGSC-TTCEEEEECTTCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccC--------CHHH----HHHHHHHHHHhcC-CCCEEEEECCCCCCHHHHHHHHHH
Confidence 56788999999999999999997531 2333 3445677777532 379999995 35554443333
Q ss_pred ---cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCE
Q 038230 308 ---KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRI 384 (480)
Q Consensus 308 ---~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~I 384 (480)
+|. +|-+-.. ..+.+..+.+..++|++.-.+- .+. +.+++.+ .+.+++ =|
T Consensus 212 l~~~~i-~iE~P~~--~~~~~~~l~~~~~iPI~~de~i---~~~----------------~~~~~~i---~~~~~d--~v 264 (379)
T 2rdx_A 212 TRDLDY-ILEQPCR--SYEECQQVRRVADQPMKLDECV---TGL----------------HMAQRIV---ADRGAE--IC 264 (379)
T ss_dssp TTTSCC-EEECCSS--SHHHHHHHHTTCCSCEEECTTC---CSH----------------HHHHHHH---HHTCCS--EE
T ss_pred HHhCCe-EEeCCcC--CHHHHHHHHhhCCCCEEEeCCc---CCH----------------HHHHHHH---HcCCCC--EE
Confidence 378 8765432 1255666666778888863221 110 1112211 233343 57
Q ss_pred EEecCCCCccChhHHHHHHHhcccCCCcEEEe
Q 038230 385 IIDPGLGFSKKAEHNLDILLGLAASHAPILIG 416 (480)
Q Consensus 385 ilDPgiGf~k~~~~~~~~lr~l~~~g~Pil~G 416 (480)
.+||.- .-.....+++.+..+..|+++.+|
T Consensus 265 ~ik~~~--~GGit~~~~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 265 CLKISN--LGGLSKARRTRDFLIDNRMPVVAE 294 (379)
T ss_dssp EEETTT--TTSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEeccc--cCCHHHHHHHHHHHHHcCCeEEEe
Confidence 888854 111223344444335579999887
No 176
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=84.99 E-value=28 Score=35.15 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=67.3
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEeCCC--------CCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---
Q 038230 229 KFQSVEAAVSQVRLMISEGADMIDIGAQ--------STRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF--- 297 (480)
Q Consensus 229 ~~~~~e~a~~~A~~~v~~GAdiIDIG~e--------StrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~--- 297 (480)
...++++..+.|++++++|-+.+-+-.. ...|... .+.+..++.....|+++++... .+++|.||..
T Consensus 149 ~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~-~~~~~~~~~~~e~v~avR~a~G-~d~~l~vDan~~~ 226 (407)
T 2o56_A 149 MLTEPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNG-PLTDKILRLGYDRMAAIRDAVG-PDVDIIAEMHAFT 226 (407)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCS-SCCHHHHHHHHHHHHHHHHHHC-TTSEEEEECTTCS
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccC-CCchhHHHHHHHHHHHHHHhcC-CCCEEEEECCCCC
Confidence 3558999999999999999999998531 0001111 1123345555566677776422 3789999953
Q ss_pred CHHHHHHHHH----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 298 YSKVASEAVG----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 298 ~~~v~~aaL~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+++.+.+.++ +|.++|-+--.....+.+..+.+..+++++.
T Consensus 227 ~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~ 271 (407)
T 2o56_A 227 DTTSAIQFGRMIEELGIFYYEEPVMPLNPAQMKQVADKVNIPLAA 271 (407)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECSSCSSSHHHHHHHHHHCCSCEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHHhCCCCEEe
Confidence 4544433332 3888887654322125677777778888886
No 177
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=84.97 E-value=13 Score=34.61 Aligned_cols=76 Identities=20% Similarity=0.230 Sum_probs=47.9
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC-------CccC
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG-------FSKK 395 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG-------f~k~ 395 (480)
.+.++++++.|+++|.+|....|... ..+++..+...+.+.+..+.|+++||. +.+-|.-+ +..+
T Consensus 86 ~~~i~~a~~lG~~~v~~~~g~~~~~~-----~~~~~~~~~~~~~l~~l~~~a~~~gv~---l~lE~~~~~~~~~~~~~~~ 157 (275)
T 3qc0_A 86 RRAVDEAAELGADCLVLVAGGLPGGS-----KNIDAARRMVVEGIAAVLPHARAAGVP---LAIEPLHPMYAADRACVNT 157 (275)
T ss_dssp HHHHHHHHHTTCSCEEEECBCCCTTC-----CCHHHHHHHHHHHHHHHHHHHHHHTCC---EEECCCCGGGTTTTBSCCC
T ss_pred HHHHHHHHHhCCCEEEEeeCCCCCCC-----cCHHHHHHHHHHHHHHHHHHHHHcCCE---EEEeECCCcccCCccccCC
Confidence 35678888888888888764344210 112344556667777888888888884 88887432 3445
Q ss_pred hhHHHHHHHhc
Q 038230 396 AEHNLDILLGL 406 (480)
Q Consensus 396 ~~~~~~~lr~l 406 (480)
..+..++++.+
T Consensus 158 ~~~~~~l~~~~ 168 (275)
T 3qc0_A 158 LGQALDICETL 168 (275)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 56656666654
No 178
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=84.87 E-value=7.6 Score=38.40 Aligned_cols=116 Identities=14% Similarity=0.178 Sum_probs=68.0
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~ 297 (480)
=+|| |-+.|. .|.+...++++.++++|+|-|-++| ||.-+ ...+. +|..++...+.....- ...+.+.+=+.
T Consensus 15 ~vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~-~~Ls~-~Er~~v~~~~~~~~~g--rvpViaGvg~~ 86 (311)
T 3h5d_A 15 FITP--FHEDGS-INFDAIPALIEHLLAHHTDGILLAG-TTAES-PTLTH-DEELELFAAVQKVVNG--RVPLIAGVGTN 86 (311)
T ss_dssp CCCC--BCTTSS-BCTTHHHHHHHHHHHTTCCCEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHSCS--SSCEEEECCCS
T ss_pred eecC--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccCh-hhCCH-HHHHHHHHHHHHHhCC--CCcEEEeCCCc
Confidence 3688 865554 6888999999999999999999987 34433 23454 5666655544332221 12344445443
Q ss_pred CHHHH----HHHHHcCC-CEEecCCCCCC--C-ch----HHHHHHhcCCCEEEEcC
Q 038230 298 YSKVA----SEAVGKGA-HIVNDVSAGQL--D-PD----MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 298 ~~~v~----~aaL~~G~-~iINdVsg~~~--d-~~----m~~l~~~~~~~vVlmh~ 341 (480)
+.+.+ +.|-+.|+ |-+-.+...-. . ++ .-.++...+.|+++-+.
T Consensus 87 ~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 142 (311)
T 3h5d_A 87 DTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNI 142 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEec
Confidence 43332 23444586 86665553211 1 23 33444557899998764
No 179
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=84.84 E-value=12 Score=38.03 Aligned_cols=109 Identities=9% Similarity=0.039 Sum_probs=68.3
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEeCCC-CCCCCC------CCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CC
Q 038230 229 KFQSVEAAVSQVRLMISEGADMIDIGAQ-STRPMA------TKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FY 298 (480)
Q Consensus 229 ~~~~~e~a~~~A~~~v~~GAdiIDIG~e-StrP~a------~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~ 298 (480)
...++++..+.|++++++|-+.+.|-.. .+..|. ...+.+..++.....|+++++... .+++|.||. ++
T Consensus 143 ~~~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG-~d~~l~vDan~~~~ 221 (403)
T 2ox4_A 143 SKGRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVG-PDVDIIVENHGHTD 221 (403)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHC-TTSEEEEECTTCSC
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhC-CCCeEEEECCCCCC
Confidence 3468899999999999999999998531 011111 001123445555566677776422 379999995 35
Q ss_pred HHHHHHHHH----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 299 SKVASEAVG----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 299 ~~v~~aaL~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
++.+.+.++ +|.++|-+-.....-+.+..+.++.+++++.
T Consensus 222 ~~~ai~~~~~l~~~~i~~iE~P~~~~d~~~~~~l~~~~~iPIa~ 265 (403)
T 2ox4_A 222 LVSAIQFAKAIEEFNIFFYEEINTPLNPRLLKEAKKKIDIPLAS 265 (403)
T ss_dssp HHHHHHHHHHHGGGCEEEEECCSCTTSTHHHHHHHHTCCSCEEE
T ss_pred HHHHHHHHHHHHhhCCCEEeCCCChhhHHHHHHHHHhCCCCEEe
Confidence 544433332 3888887654332235677777788888886
No 180
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=84.82 E-value=25 Score=32.74 Aligned_cols=72 Identities=18% Similarity=0.263 Sum_probs=42.5
Q ss_pred hHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCC----ccChhHH
Q 038230 324 DMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGF----SKKAEHN 399 (480)
Q Consensus 324 ~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf----~k~~~~~ 399 (480)
+.++++++.|+++|++|....+.. ..+++..+...+.+.+.+ +.+.|+ +|.+-|..++ ..+.++-
T Consensus 93 ~~i~~A~~lGa~~v~~~~g~~~~~------~~~~~~~~~~~~~l~~l~--a~~~gv---~l~lEn~~~~~~~~~~~~~~~ 161 (285)
T 1qtw_A 93 DEMQRCEQLGLSLLNFHPGSHLMQ------ISEEDCLARIAESINIAL--DKTQGV---TAVIENTAGQGSNLGFKFEHL 161 (285)
T ss_dssp HHHHHHHHTTCCEEEECCCBCTTT------SCHHHHHHHHHHHHHHHH--HHCSSC---EEEEECCCCCTTBCCSSHHHH
T ss_pred HHHHHHHHcCCCEEEECcCCCCCC------CCHHHHHHHHHHHHHHHH--hccCCC---EEEEecCCCCCCcccCCHHHH
Confidence 468888889999888886432211 012233334444455543 345788 4888885442 4566666
Q ss_pred HHHHHhc
Q 038230 400 LDILLGL 406 (480)
Q Consensus 400 ~~~lr~l 406 (480)
.++++.+
T Consensus 162 ~~l~~~v 168 (285)
T 1qtw_A 162 AAIIDGV 168 (285)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 6777664
No 181
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=84.68 E-value=21 Score=35.28 Aligned_cols=108 Identities=11% Similarity=0.134 Sum_probs=66.8
Q ss_pred HHHHHHHcCCcCCCCeEEEeCC-----CHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCcccc
Q 038230 276 PVLEAVLTMPEMEGKLVSVDTF-----YSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQN 350 (480)
Q Consensus 276 ~vi~~l~~~~~~~~~pISIDT~-----~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~ 350 (480)
..++.+++. ++.|+.+..+ ..+.++.+++.|+++|- +.++. .+++++.+++++.+++..-. +
T Consensus 67 ~~i~~i~~~---~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~-l~~g~-p~~~~~~l~~~g~~v~~~v~-----s--- 133 (326)
T 3bo9_A 67 KAISELRQK---TDKPFGVNIILVSPWADDLVKVCIEEKVPVVT-FGAGN-PTKYIRELKENGTKVIPVVA-----S--- 133 (326)
T ss_dssp HHHHHHHTT---CSSCEEEEEETTSTTHHHHHHHHHHTTCSEEE-EESSC-CHHHHHHHHHTTCEEEEEES-----S---
T ss_pred HHHHHHHHh---cCCCEEEEEeccCCCHHHHHHHHHHCCCCEEE-ECCCC-cHHHHHHHHHcCCcEEEEcC-----C---
Confidence 445666664 3556665532 26788889999999986 34332 46788888898888775211 0
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecC-CCCccChhHHHHHHHhc-ccCCCcEEE
Q 038230 351 EENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPG-LGFSKKAEHNLDILLGL-AASHAPILI 415 (480)
Q Consensus 351 ~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg-iGf~k~~~~~~~~lr~l-~~~g~Pil~ 415 (480)
.+.+..+.++|++ -|+++.. .|.......++++++++ +..++|++.
T Consensus 134 -----------------~~~a~~a~~~GaD--~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPvia 181 (326)
T 3bo9_A 134 -----------------DSLARMVERAGAD--AVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIA 181 (326)
T ss_dssp -----------------HHHHHHHHHTTCS--CEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEE
T ss_pred -----------------HHHHHHHHHcCCC--EEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEE
Confidence 0223346678986 7999852 22211112367777776 346889876
No 182
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=84.55 E-value=12 Score=36.78 Aligned_cols=106 Identities=21% Similarity=0.248 Sum_probs=69.7
Q ss_pred cC-CHHHHHHHHHHHHHcCCCEEEeCCCCCC------CCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE--EeCCC--
Q 038230 230 FQ-SVEAAVSQVRLMISEGADMIDIGAQSTR------PMATKISAEKELERLIPVLEAVLTMPEMEGKLVS--VDTFY-- 298 (480)
Q Consensus 230 ~~-~~e~a~~~A~~~v~~GAdiIDIG~eStr------P~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS--IDT~~-- 298 (480)
|. +++.+.+.++++++.||+-|.|-.+..- +|...++.++-.+++.-++++-.. .+..|- .|++-
T Consensus 89 yg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~----~~~~i~aRtda~~~~ 164 (295)
T 1xg4_A 89 FGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTD----PDFVIMARTDALAVE 164 (295)
T ss_dssp SSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSS----TTSEEEEEECCHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccC----CCcEEEEecHHhhhc
Confidence 55 7899999999999999999999765421 234467766666776655544331 244333 25443
Q ss_pred --HHHHHHHHH---cCCCEEecCCCCCCC-chHHHHHHhcCCCEEEEcC
Q 038230 299 --SKVASEAVG---KGAHIVNDVSAGQLD-PDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 299 --~~v~~aaL~---~G~~iINdVsg~~~d-~~m~~l~~~~~~~vVlmh~ 341 (480)
.+.++.|.. +||++|- +-+.. + +.+..++++..+|+++.-.
T Consensus 165 gl~~ai~ra~ay~eAGAd~i~-~e~~~-~~~~~~~i~~~~~iP~~~N~~ 211 (295)
T 1xg4_A 165 GLDAAIERAQAYVEAGAEMLF-PEAIT-ELAMYRQFADAVQVPILANIT 211 (295)
T ss_dssp CHHHHHHHHHHHHHTTCSEEE-ETTCC-SHHHHHHHHHHHCSCBEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEE-EeCCC-CHHHHHHHHHHcCCCEEEEec
Confidence 345554433 5999987 54543 4 6778888888999876433
No 183
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=84.53 E-value=20 Score=35.45 Aligned_cols=147 Identities=16% Similarity=0.161 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCe-EEEeCCCHHHHHHHHHcCCCE
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKL-VSVDTFYSKVASEAVGKGAHI 312 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~p-ISIDT~~~~v~~aaL~~G~~i 312 (480)
+..++.++.|+++|||+|-|.- |.. +.+.+|++.=-+.+.|-++.+.+..+ +.+ +-++..-...++.-.+.|++.
T Consensus 190 ~~~~~~~~~qi~aGad~i~i~D-~~a-~~~~lsp~~f~~f~~p~~k~i~~~~~--~~~iih~~g~~~~~l~~~~~~g~d~ 265 (348)
T 4ay7_A 190 EASIIYANAMVEAGADVIAIAD-PVA-SPDLMSPDSFRQFLKSRLQKFASSVN--SVTVLHICGNVNPILSDMADCGFEG 265 (348)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEC-GGG-STTTSCHHHHHHHHHHHHHHHHHHSS--SEEEEECCSCCHHHHHHHHTSCCSE
T ss_pred HHHHHHHHHHHhcCCCcceeec-ccc-ccccCCHHHHHHHhhHHHHHHHhhcc--CCcEEEecCCcHHHHHHHHHhcccc
Confidence 3445678899999999999863 211 23467776655566677776665432 333 455655566777777789999
Q ss_pred EecCCCCCCCchHHHHHHh-cCCCEEEEcCCCCCC-ccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCC
Q 038230 313 VNDVSAGQLDPDMYKVVAG-LKVPYVAMHMRGDPS-TMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGL 390 (480)
Q Consensus 313 INdVsg~~~d~~m~~l~~~-~~~~vVlmh~~g~p~-~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgi 390 (480)
|+ +.- .-..++.+++ +|-.++++-+- +|. .+.. -. .+++.+...+.+ +.|- -|+=||.
T Consensus 266 i~-~d~---~~~~~~~~k~~~g~~~~l~Gnl-dp~~~l~~---g~----~e~i~~~v~~~l----~~~g----~I~~~Gh 325 (348)
T 4ay7_A 266 LS-VEE---KIGSAKKGKEVIGTRARLVGNV-SSPFTLLP---GP----VDKIKAEAKEAL----EGGI----DVLAPGC 325 (348)
T ss_dssp EE-CCG---GGCCHHHHHHHHTTSSEEEEEE-CCCCCCTT---CC----HHHHHHHHHHHH----HTTC----SEEEESS
T ss_pred cc-ccc---hhhHHHHHHHHhCCCEEEEcCC-CChHhhcC---CC----HHHHHHHHHHHH----hCCC----CEEeCCC
Confidence 97 321 1112334443 66666665321 132 1111 01 123333333333 3332 3889999
Q ss_pred CCc-cChhHHHHHHH
Q 038230 391 GFS-KKAEHNLDILL 404 (480)
Q Consensus 391 Gf~-k~~~~~~~~lr 404 (480)
|.. .+..+|++.+-
T Consensus 326 gi~p~tp~env~a~v 340 (348)
T 4ay7_A 326 GIAPMTPLENVKALV 340 (348)
T ss_dssp SCCTTCCHHHHHHHH
T ss_pred ccCCCCCHHHHHHHH
Confidence 874 45566665543
No 184
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=84.28 E-value=8 Score=35.87 Aligned_cols=95 Identities=17% Similarity=0.164 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCH-HHHHHHHH
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQ--STRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYS-KVASEAVG 307 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~e--StrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~-~v~~aaL~ 307 (480)
++...+.++.+.+.|||+|-++.. ..-|+.. .. ...++.|++. ++.|+-++. .++ +.++.+.+
T Consensus 22 ~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~-~~--------~~~i~~l~~~---~~~~~~v~l~vnd~~~~v~~~~~ 89 (230)
T 1rpx_A 22 FSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNIT-IG--------PLVVDSLRPI---TDLPLDVHLMIVEPDQRVPDFIK 89 (230)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC-CC--------HHHHHHHGGG---CCSCEEEEEESSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEeeccCCcccccc-cC--------HHHHHHHHhc---cCCcEEEEEEecCHHHHHHHHHH
Confidence 345666777888899999988731 1112211 11 1334555654 244444442 224 47888899
Q ss_pred cCCCEEecCCCC--CC--CchHHHHHHhcCCCEEEEc
Q 038230 308 KGAHIVNDVSAG--QL--DPDMYKVVAGLKVPYVAMH 340 (480)
Q Consensus 308 ~G~~iINdVsg~--~~--d~~m~~l~~~~~~~vVlmh 340 (480)
+|++.|. +-+. .. ..+.++.++++|..+.+.-
T Consensus 90 ~Gad~v~-vh~~~~~~~~~~~~~~~~~~~g~~ig~~~ 125 (230)
T 1rpx_A 90 AGADIVS-VHCEQSSTIHLHRTINQIKSLGAKAGVVL 125 (230)
T ss_dssp TTCSEEE-EECSTTTCSCHHHHHHHHHHTTSEEEEEE
T ss_pred cCCCEEE-EEecCccchhHHHHHHHHHHcCCcEEEEe
Confidence 9999984 3322 21 1457788888887766543
No 185
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=84.20 E-value=12 Score=36.81 Aligned_cols=147 Identities=16% Similarity=0.095 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcC-CCCeEEEeCCC-HHHHHHHHHcCCCE
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEM-EGKLVSVDTFY-SKVASEAVGKGAHI 312 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~-~~~pISIDT~~-~~v~~aaL~~G~~i 312 (480)
..++.++.|+++|||+|=+. .|. +..+|++.--+...|-.+.+.+..+. .++|+..=+-. ...++.-.+.|++.
T Consensus 180 ~~~~~~~~~~~aGad~i~i~-d~~---~~~lsp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~~g~~~~l~~l~~~g~d~ 255 (338)
T 2eja_A 180 TVLAYLKEQIKAGADVVQIF-DSW---VNNLSLEDYGEYVYPYVNYLISELKDFSDTPVIYFFRGSSSFIDLAVDYRADA 255 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEE-ETT---GGGSCHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEESSHHHHHHHHTTSCCSE
T ss_pred HHHHHHHHHHHhCCCEEEEe-cCc---cccCCHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEcCCcHHHHHHHHHcCCCE
Confidence 34567889999999998776 332 23677765444444444443322110 15565553333 44555555679998
Q ss_pred EecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHH-CCCCCCCEEEecCCC
Q 038230 313 VNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAEL-SGIPAWRIIIDPGLG 391 (480)
Q Consensus 313 INdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~-~Gi~~~~IilDPgiG 391 (480)
++ +.- ...+.++.+.+ .++++-.- .| +.-. .. .+++. +.+.++.+ .|- ....|+.||.|
T Consensus 256 ~~-~d~---~~dl~~~~~~~--~~~l~Gn~-dp-~~l~---gt----~e~i~----~~v~~~l~~~g~-~~g~I~~~g~g 315 (338)
T 2eja_A 256 LS-VDW---SVDIPELFKIY--DKGFQGNL-EP-AVLY---AS----EEVIE----EKTLGLLRRIPV-KTRYVFNLGHG 315 (338)
T ss_dssp EE-CCT---TSCHHHHHHHC--CSEEECCB-CG-GGGG---SC----HHHHH----HHHHHHHTTCCC-SSSEEBCBSSC
T ss_pred EE-eCC---CCCHHHHHHhC--CeEEEECC-CH-HHhc---CC----HHHHH----HHHHHHHHHhCC-CCCeEEeCCCC
Confidence 86 321 23455555556 55555432 13 2211 11 12333 33333333 353 24799999998
Q ss_pred Cc-cChhHHHHHHHh
Q 038230 392 FS-KKAEHNLDILLG 405 (480)
Q Consensus 392 f~-k~~~~~~~~lr~ 405 (480)
.. .+..+|+..+-+
T Consensus 316 i~~~~p~en~~a~v~ 330 (338)
T 2eja_A 316 LAPDMELEKVKYLVD 330 (338)
T ss_dssp CCTTSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
Confidence 73 445666665543
No 186
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=84.19 E-value=1.9 Score=44.23 Aligned_cols=67 Identities=13% Similarity=0.213 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCEEe
Q 038230 236 AVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~iIN 314 (480)
..++++.++++|+|+|.|+... + ++ +.+...|+.+++.. .++||.+ ....++.++.+.++|+|.|.
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~---g----~~----~~~~e~i~~ir~~~--~~~pviv~~v~~~~~a~~a~~~Gad~I~ 220 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAH---G----HS----TRIIELIKKIKTKY--PNLDLIAGNIVTKEAALDLISVGADCLK 220 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC---C----SS----HHHHHHHHHHHHHC--TTCEEEEEEECSHHHHHHHHTTTCSEEE
T ss_pred HHHHHHHHHHCCCCEEEEeCCC---C----Ch----HHHHHHHHHHHHHC--CCCeEEEcCCCcHHHHHHHHhcCCCEEE
Confidence 3567788899999999996422 1 11 22334566666652 1678886 67779999999999999886
Q ss_pred c
Q 038230 315 D 315 (480)
Q Consensus 315 d 315 (480)
-
T Consensus 221 v 221 (404)
T 1eep_A 221 V 221 (404)
T ss_dssp E
T ss_pred E
Confidence 3
No 187
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=83.94 E-value=8 Score=39.06 Aligned_cols=149 Identities=11% Similarity=0.053 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCC----CCeEEE-eCCCHHHHHHHHHc
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEME----GKLVSV-DTFYSKVASEAVGK 308 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~----~~pISI-DT~~~~v~~aaL~~ 308 (480)
+..++.++.|+++|||+|-|.- |. +..+|++.=.+-..|-.+.|.+..+.. ++|+-. ..-....++.-.+.
T Consensus 197 ~~~~~y~~~qi~aGad~i~ifD-s~---~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~g~~~~l~~l~~~ 272 (368)
T 4exq_A 197 QAVAAYLNAQIEAGAQAVMIFD-TW---GGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGGGLWLEDLAAT 272 (368)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEE-TT---GGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEETTCGGGHHHHHTS
T ss_pred HHHHHHHHHHHHhCCCEEEEeC-Cc---cccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcCCcHHHHHHHHHh
Confidence 3445677889999999998853 32 346777665556667776666543211 256433 33334556666667
Q ss_pred CCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEec
Q 038230 309 GAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDP 388 (480)
Q Consensus 309 G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDP 388 (480)
|++.++ +. ..-.+.+..+.+|-.++++-+- +|.... .. -+++.+..++.++.+ |- ....|+-|
T Consensus 273 g~d~i~-~d---~~~dl~~ak~~~g~~~~l~Gnl-dp~~L~----gt----~e~I~~~v~~~l~~~---g~-~~g~I~n~ 335 (368)
T 4exq_A 273 GVDAVG-LD---WTVNLGRARERVAGRVALQGNL-DPTILF----AP----PEAIRAEARAVLDSY---GN-HPGHVFNL 335 (368)
T ss_dssp SCSEEE-CC---TTSCHHHHHHHHTTSSEEEEEE-CGGGGG----SC----HHHHHHHHHHHHHHH---CS-CSCEEEEE
T ss_pred CCCEEe-eC---CCCCHHHHHHHhCCCEEEEECC-CHHHhC----CC----HHHHHHHHHHHHHHh---CC-CCCEEEeC
Confidence 999996 32 2245666667777666665331 232221 11 233444444555544 22 13689999
Q ss_pred CCCCc-cChhHHHHHH
Q 038230 389 GLGFS-KKAEHNLDIL 403 (480)
Q Consensus 389 giGf~-k~~~~~~~~l 403 (480)
|.|.. .+..+|+..+
T Consensus 336 Ghgi~p~tp~Env~a~ 351 (368)
T 4exq_A 336 GHGISQFTPPEHVAEL 351 (368)
T ss_dssp SSCCCTTCCHHHHHHH
T ss_pred CCCCCCCcCHHHHHHH
Confidence 99874 4456666544
No 188
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=83.93 E-value=6.3 Score=39.25 Aligned_cols=148 Identities=18% Similarity=0.165 Sum_probs=81.1
Q ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcC--CCCe-EEEeCCCHHHHHHHHHcCCCE
Q 038230 236 AVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEM--EGKL-VSVDTFYSKVASEAVGKGAHI 312 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~--~~~p-ISIDT~~~~v~~aaL~~G~~i 312 (480)
.++.++.|+++|||+|=+. +|. +..+|++.-.+...|.++.+.+..+. .++| +-+.--....++.-.+.|++.
T Consensus 195 ~~~~~~~~~~aGad~iqi~-D~~---~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~c~g~~~~l~~l~~~g~d~ 270 (353)
T 1j93_A 195 MAKYIRYQADSGAQAVQIF-DSW---ATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGSGGLLERLPLTGVDV 270 (353)
T ss_dssp HHHHHHHHHHTTCSEEEEE-CGG---GGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEEEECSSCTTTGGGGGGGCCSE
T ss_pred HHHHHHHHHHhCCCEEEEe-Ccc---cccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEEEECCChHHHHHHHHhcCCCE
Confidence 4467788999999998776 332 23677765444444544443322110 1344 334444444555555679998
Q ss_pred EecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCC
Q 038230 313 VNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGF 392 (480)
Q Consensus 313 INdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf 392 (480)
++ +. ....+.++.+.++-.++++-.- .| +.-. .+ .+++.+..++.++.+ |- .+.|+-||.|+
T Consensus 271 ~~-~d---~~~d~~~~~~~~g~~~~l~Gnl-dp-~~l~---~~----~e~i~~~v~~~l~~~---~~--~g~I~~~g~gi 332 (353)
T 1j93_A 271 VS-LD---WTVDMADGRRRLGPNVAIQGNV-DP-GVLF---GS----KEFITNRINDTVKKA---GK--GKHILNLGHGI 332 (353)
T ss_dssp EE-CC---TTSCHHHHHHHTCSSSEEECCB-CG-GGGG---SC----HHHHHHHHHHHHHHH---CS--SSEEBCBSSCC
T ss_pred EE-eC---CCCCHHHHHHHcCCCeEEEecC-CH-HHHc---CC----HHHHHHHHHHHHHHh---CC--CCEEEeCCCCC
Confidence 87 43 2345666666677666665432 13 2211 11 233333334444433 43 38999999998
Q ss_pred c-cChhHHHHHHHh
Q 038230 393 S-KKAEHNLDILLG 405 (480)
Q Consensus 393 ~-k~~~~~~~~lr~ 405 (480)
. .+..+|+..+-+
T Consensus 333 ~~~~~~enl~a~ve 346 (353)
T 1j93_A 333 KVGTPEENFAHFFE 346 (353)
T ss_dssp CTTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH
Confidence 5 445667666554
No 189
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=83.76 E-value=2.6 Score=42.73 Aligned_cols=58 Identities=14% Similarity=0.202 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHHH---HcCCCEEEeCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE
Q 038230 232 SVEAAVSQVRLMI---SEGADMIDIGAQSTR-PMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV 294 (480)
Q Consensus 232 ~~e~a~~~A~~~v---~~GAdiIDIG~eStr-P~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI 294 (480)
++++..+-|+++. +.|||+||||..+-. |+. -....+.+.+..+++.+++. .++||.+
T Consensus 137 ~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg--~~l~~~~e~~~~il~av~~~---~~~PV~v 198 (354)
T 4ef8_A 137 SMRENVEMCKRLAAVATEKGVILELNLSCPNVPGK--PQVAYDFDAMRQCLTAVSEV---YPHSFGV 198 (354)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTS--CCGGGSHHHHHHHHHHHHHH---CCSCEEE
T ss_pred CHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCc--hhhccCHHHHHHHHHHHHHh---hCCCeEE
Confidence 4566666676665 689999999975422 221 12223445567777777765 3566554
No 190
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=83.68 E-value=10 Score=36.95 Aligned_cols=112 Identities=16% Similarity=0.164 Sum_probs=70.7
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY 298 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~ 298 (480)
+|| |-+.|. .|.+...++++.++++|+|-|-++| ||.-+ ...|. +|..++. +...+.. .++...+=+.+
T Consensus 8 vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~gl~v~G-tTGE~-~~Ls~-eEr~~v~---~~~~~~~--~gViaGvg~~~ 76 (288)
T 2nuw_A 8 ITP--FDKQGK-VNVDALKTHAKNLLEKGIDAIFVNG-TTGLG-PALSK-DEKRQNL---NALYDVT--HKLIFQVGSLN 76 (288)
T ss_dssp CCC--BCTTSC-BCHHHHHHHHHHHHHTTCCEEEETS-TTTTG-GGSCH-HHHHHHH---HHHTTTC--SCEEEECCCSC
T ss_pred ecC--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccCh-hhCCH-HHHHHHH---HHHHHHh--CCeEEeeCCCC
Confidence 688 765454 6899999999999999999999987 44433 23444 5666654 4445542 13556665545
Q ss_pred HH-H---HHHHHHcCCCEEecCCCCCC---C-chHH----HHHHhcCCCEEEEcC
Q 038230 299 SK-V---ASEAVGKGAHIVNDVSAGQL---D-PDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 299 ~~-v---~~aaL~~G~~iINdVsg~~~---d-~~m~----~l~~~~~~~vVlmh~ 341 (480)
.+ + ++.|-+.|+|-+--+...-. . ++++ .++...+.|+++-+.
T Consensus 77 t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~ 131 (288)
T 2nuw_A 77 LNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNY 131 (288)
T ss_dssp HHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 33 3 33344469997776654211 2 3333 456667899998664
No 191
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=83.45 E-value=6.6 Score=36.82 Aligned_cols=89 Identities=16% Similarity=0.152 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcCCCE
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKGAHI 312 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G~~i 312 (480)
+.++.|+.+.+.||+.|-+=... ..+ .........++.+++. .++|+-+. -.+++-+++++++|++.
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~-~~~-------~~~~~~~~~i~~i~~~---~~ipvi~~ggI~~~~~~~~~~~~Gad~ 99 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDIT-ASV-------EKRKTMLELVEKVAEQ---IDIPFTVGGGIHDFETASELILRGADK 99 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESS-CSS-------SHHHHHHHHHHHHHTT---CCSCEEEESSCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHcCCCEEEEECCc-hhh-------cCCcccHHHHHHHHHh---CCCCEEEeCCCCCHHHHHHHHHcCCCE
Confidence 45677889999999987653211 111 0122334567777765 47888774 45678899999999998
Q ss_pred EecCCCCCCCch-HHHHHHhcCC
Q 038230 313 VNDVSAGQLDPD-MYKVVAGLKV 334 (480)
Q Consensus 313 INdVsg~~~d~~-m~~l~~~~~~ 334 (480)
+---+....+++ +.++++.++.
T Consensus 100 V~lg~~~l~~p~~~~~~~~~~g~ 122 (253)
T 1thf_D 100 VSINTAAVENPSLITQIAQTFGS 122 (253)
T ss_dssp EEESHHHHHCTHHHHHHHHHHCG
T ss_pred EEEChHHHhChHHHHHHHHHcCC
Confidence 743222212343 6667777764
No 192
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=83.23 E-value=21 Score=33.64 Aligned_cols=69 Identities=13% Similarity=0.230 Sum_probs=39.6
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHH
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDI 402 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~ 402 (480)
.+.++++++.|+++|.+|....|.. +++-.+...+.+.+..+.|.++|| +|.+-|.. .+..+..++
T Consensus 105 ~~~i~~a~~lG~~~v~~~~G~~~~~--------~~~~~~~~~~~l~~l~~~a~~~Gv---~l~lE~~~---~~~~~~~~l 170 (290)
T 3tva_A 105 KEISDFASWVGCPAIGLHIGFVPES--------SSPDYSELVRVTQDLLTHAANHGQ---AVHLETGQ---ESADHLLEF 170 (290)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCCCT--------TSHHHHHHHHHHHHHHHHHHTTTC---EEEEECCS---SCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccc--------chHHHHHHHHHHHHHHHHHHHcCC---EEEEecCC---CCHHHHHHH
Confidence 3467777777777777775333322 122344455666777777777777 37777653 233444444
Q ss_pred HHh
Q 038230 403 LLG 405 (480)
Q Consensus 403 lr~ 405 (480)
++.
T Consensus 171 ~~~ 173 (290)
T 3tva_A 171 IED 173 (290)
T ss_dssp HHH
T ss_pred HHh
Confidence 444
No 193
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=83.06 E-value=6.2 Score=37.33 Aligned_cols=162 Identities=15% Similarity=0.144 Sum_probs=83.5
Q ss_pred HHHHHHHHHHcCCCE--EEe--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcC
Q 038230 236 AVSQVRLMISEGADM--IDI--GAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKG 309 (480)
Q Consensus 236 a~~~A~~~v~~GAdi--IDI--G~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G 309 (480)
..+..+.+.+.|||+ +|| |. .-|+-. .. .++++.+++.. .+.|+-+| +.+|+-..+.+..
T Consensus 20 l~~~i~~~~~~g~d~iHvDvmDg~--fvpn~t-~G--------~~~v~~lr~~~--p~~~~dvhLmv~dp~~~i~~~~~- 85 (227)
T 1tqx_A 20 LAEETQRMESLGAEWIHLDVMDMH--FVPNLS-FG--------PPVINNLKKYT--KSIFFDVHLMVEYPEKYVPLLKT- 85 (227)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSS--SSSCBC-CC--------HHHHHHHGGGC--SSCEEEEEEESSCGGGGGGGCTT-
T ss_pred HHHHHHHHHHcCCCEEEEEEEeCC--cCcchh-cC--------HHHHHHHHHhC--CCCcEEEEEEEcCHHHHHHHHHh-
Confidence 334445556789998 787 42 223221 11 15677778752 15565554 3455533333333
Q ss_pred CCEEecCCCCCCC---chHHH---HHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCC-CCCC
Q 038230 310 AHIVNDVSAGQLD---PDMYK---VVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSG-IPAW 382 (480)
Q Consensus 310 ~~iINdVsg~~~d---~~m~~---l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~G-i~~~ 382 (480)
++++- |-++..+ .+.++ .++++|+.+-+.-+ |.|..+ .++.....| +
T Consensus 86 Ad~it-vH~ea~~~~~~~~i~~~~~i~~~G~k~gvaln---p~tp~~-------------------~~~~~l~~g~~--- 139 (227)
T 1tqx_A 86 SNQLT-FHFEALNEDTERCIQLAKEIRDNNLWCGISIK---PKTDVQ-------------------KLVPILDTNLI--- 139 (227)
T ss_dssp SSEEE-EEGGGGTTCHHHHHHHHHHHHTTTCEEEEEEC---TTSCGG-------------------GGHHHHTTTCC---
T ss_pred CCEEE-EeecCCccCHHHHHHHHHHHHHcCCeEEEEeC---CCCcHH-------------------HHHHHhhcCCc---
Confidence 77774 3332211 45777 88899976665333 333211 112223445 5
Q ss_pred CEE----EecCCCCccChhHHHHHHHhcc-cC-CCcEEEeeccccccccccCCCCcCcccHHHHHHHHHHHHcCCcEEEc
Q 038230 383 RII----IDPGLGFSKKAEHNLDILLGLA-AS-HAPILIGPSRKRFLGEICNRPSADERDPATIASITAGVLGGANIVRV 456 (480)
Q Consensus 383 ~Ii----lDPgiGf~k~~~~~~~~lr~l~-~~-g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~IlRv 456 (480)
+.+ ++||+|=.+-..+.++.+++++ .. ++++.+- |-.+ ..|+ ..+...||+++-+
T Consensus 140 D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~Vd-----------GGI~-----~~ti---~~~~~aGAd~~V~ 200 (227)
T 1tqx_A 140 NTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVD-----------GGLN-----IETT---EISASHGANIIVA 200 (227)
T ss_dssp SEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEEE-----------SSCC-----HHHH---HHHHHHTCCEEEE
T ss_pred CEEEEeeeccCCCCcccchHHHHHHHHHHHhccCCeEEEE-----------CCCC-----HHHH---HHHHHcCCCEEEE
Confidence 467 8998873333444455555552 22 5555431 2221 1233 4567789888765
No 194
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=83.00 E-value=4 Score=38.49 Aligned_cols=99 Identities=12% Similarity=0.088 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCc-CCCCeEEEeCCCH-HHHHHHHHcCC
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPE-MEGKLVSVDTFYS-KVASEAVGKGA 310 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~-~~~~pISIDT~~~-~v~~aaL~~G~ 310 (480)
.....+..+.+.+.|||+|-++.. ..+.....+. -.++++.+++..+ ..++.+.+ .+| +-++.++++|+
T Consensus 16 ~~~l~~~i~~~~~~Gad~ihldi~-DG~fvp~~~~------g~~~v~~lr~~~~~~~~vhlmv--~dp~~~i~~~~~aGa 86 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGADWIHVDVM-DGRFVPNITI------GPLIVDAIRPLTKKTLDVHLMI--VEPEKYVEDFAKAGA 86 (230)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEE-BSSSSSCBCB------CHHHHHHHGGGCCSEEEEEEES--SSGGGTHHHHHHHTC
T ss_pred HhHHHHHHHHHHHcCCCEEEEEEE-ecCCCcchhh------hHHHHHHHHhhcCCcEEEEEEc--cCHHHHHHHHHHcCC
Confidence 344556667777899999544431 1111111111 1145666776421 01333444 454 24688899999
Q ss_pred CEE--ecC--CCCCCCchHHHHHHhcCCCEEEEcC
Q 038230 311 HIV--NDV--SAGQLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 311 ~iI--NdV--sg~~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
+.+ -.- .. ....+.++.++++|..+.+.-+
T Consensus 87 dgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~ 120 (230)
T 1tqj_A 87 DIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLN 120 (230)
T ss_dssp SEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEe
Confidence 988 322 21 2125788888899987776543
No 195
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=83.00 E-value=7.3 Score=38.37 Aligned_cols=121 Identities=12% Similarity=0.097 Sum_probs=73.3
Q ss_pred cEEEEEEe--cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCC
Q 038230 211 TSVMGILN--LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEME 288 (480)
Q Consensus 211 ~~imGIlN--~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~ 288 (480)
+.+=||+- +|| |-+.|. .|.+...++++.++++|+|-|=++| ||.-+ ...+. +|..++...+ .+... .
T Consensus 13 ~~~~Gi~~alvTP--f~~dg~-iD~~~l~~lv~~li~~Gv~Gl~v~G-tTGE~-~~Ls~-~Er~~v~~~~---~~~~~-g 82 (307)
T 3s5o_A 13 VDIAGIYPPVTTP--FTATAE-VDYGKLEENLHKLGTFPFRGFVVQG-SNGEF-PFLTS-SERLEVVSRV---RQAMP-K 82 (307)
T ss_dssp CCCCEEECBCCCC--BCTTSC-BCHHHHHHHHHHHTTSCCSEEEESS-GGGTG-GGSCH-HHHHHHHHHH---HHTSC-T
T ss_pred CCCCceEEeeEcc--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccch-hhCCH-HHHHHHHHHH---HHHcC-C
Confidence 34446555 477 876554 7899999999999999999999987 33332 23444 5666655443 33211 2
Q ss_pred CCeEEE--eCCCHH-H---HHHHHHcCCCEEecCCCCCC----C-ch----HHHHHHhcCCCEEEEcC
Q 038230 289 GKLVSV--DTFYSK-V---ASEAVGKGAHIVNDVSAGQL----D-PD----MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 289 ~~pISI--DT~~~~-v---~~aaL~~G~~iINdVsg~~~----d-~~----m~~l~~~~~~~vVlmh~ 341 (480)
++||-+ =+.+.+ + ++.|-+.|+|-+--+...-. . ++ +-.++...+.|+++-+.
T Consensus 83 r~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~ 150 (307)
T 3s5o_A 83 NRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSV 150 (307)
T ss_dssp TSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeC
Confidence 466544 333333 2 33555569997776654211 1 23 33455557899998764
No 196
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=82.69 E-value=7.4 Score=39.49 Aligned_cols=112 Identities=19% Similarity=0.162 Sum_probs=66.7
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHH-HHHHHHcCCcCCCCeEEE--
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIP-VLEAVLTMPEMEGKLVSV-- 294 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~-vi~~l~~~~~~~~~pISI-- 294 (480)
=+|| |-+.|. .|.+...+.++.++++|+|-|=++| ||.-+ ...+. +|..++.. +++.... .+||-+
T Consensus 67 lvTP--F~~dg~-ID~~al~~lv~~li~~Gv~Gl~v~G-TTGE~-~~Ls~-eEr~~vi~~~ve~~~g-----rvpViaGv 135 (360)
T 4dpp_A 67 IKTP--YLPDGR-FDLEAYDDLVNIQIQNGAEGVIVGG-TTGEG-QLMSW-DEHIMLIGHTVNCFGG-----SIKVIGNT 135 (360)
T ss_dssp CCCC--BCTTSS-BCHHHHHHHHHHHHHTTCCEEEESS-TTTTG-GGSCH-HHHHHHHHHHHHHHTT-----TSEEEEEC
T ss_pred EeCc--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEecc-cccCh-hhCCH-HHHHHHHHHHHHHhCC-----CCeEEEec
Confidence 4789 865554 7899999999999999999999987 44433 23454 55655554 4444432 455544
Q ss_pred eCCCHHHH----HHHHHcCCCEEecCCCCCC---CchHH---HHHHhcCCCEEEEcC
Q 038230 295 DTFYSKVA----SEAVGKGAHIVNDVSAGQL---DPDMY---KVVAGLKVPYVAMHM 341 (480)
Q Consensus 295 DT~~~~v~----~aaL~~G~~iINdVsg~~~---d~~m~---~l~~~~~~~vVlmh~ 341 (480)
=+.+.+.+ +.|-+.|+|-+--+.-.-. +++++ .-+++. .|+++-+.
T Consensus 136 g~~st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a-~PiilYNi 191 (360)
T 4dpp_A 136 GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHM-GPTIIYNV 191 (360)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGG-SCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-CCEEEEeC
Confidence 33333332 3344569987766654211 13333 333343 58887653
No 197
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=82.64 E-value=23 Score=35.27 Aligned_cols=94 Identities=14% Similarity=0.177 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHH-HHHH
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVAS-EAVG 307 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~-aaL~ 307 (480)
++++..+.|++++++|-+.|.|.... +.+...+++ +++++... .+++|.+|.. +++.+. +.++
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~--------~~~~~~e~v----~avr~a~g-~~~~l~vDan~~~~~~~a~~~~~~ 207 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGT--------NVKEDVKRI----EAVRERVG-NDIAIRVDVNQGWKNSANTLTALR 207 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS--------CHHHHHHHH----HHHHHHHC-TTSEEEEECTTTTBSHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCC--------CHHHHHHHH----HHHHHHhC-CCCeEEEECCCCCCHHHHHHHHHH
Confidence 67888999999999999999996421 344555554 44444321 2789999964 344433 3333
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+|.++|-+--.....+.+..+.+..++|++.
T Consensus 208 ~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~ 242 (369)
T 2p8b_A 208 SLGHLNIDWIEQPVIADDIDAMAHIRSKTDLPLMI 242 (369)
T ss_dssp TSTTSCCSCEECCBCTTCHHHHHHHHHTCCSCEEE
T ss_pred HHHhCCCcEEECCCCcccHHHHHHHHHhCCCCEEe
Confidence 3888887654322125577777778888886
No 198
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=82.42 E-value=8.6 Score=38.12 Aligned_cols=116 Identities=16% Similarity=0.124 Sum_probs=70.9
Q ss_pred ecCCCCCC-CCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHcCCcCCCCeEEEe
Q 038230 218 NLTPDSFS-DGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVL-EAVLTMPEMEGKLVSVD 295 (480)
Q Consensus 218 N~tpDSFs-dgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi-~~l~~~~~~~~~pISID 295 (480)
=+|| |- +.|. .|.+...++++.++++|+|-|=++| ||.-+ ...+. +|..++...+ +..... ..+.+.+=
T Consensus 18 ~vTP--f~~~dg~-iD~~~l~~lv~~li~~Gv~gl~v~G-tTGE~-~~Ls~-~Er~~v~~~~~~~~~gr---vpviaGvg 88 (318)
T 3qfe_A 18 AVTF--FDSKTDT-LDLASQERYYAYLARSGLTGLVILG-TNAEA-FLLTR-EERAQLIATARKAVGPD---FPIMAGVG 88 (318)
T ss_dssp CCCC--EETTTTE-ECHHHHHHHHHHHHTTTCSEEEESS-GGGTG-GGSCH-HHHHHHHHHHHHHHCTT---SCEEEECC
T ss_pred eeCC--ccCCCCC-CCHHHHHHHHHHHHHcCCCEEEeCc-cccCh-hhCCH-HHHHHHHHHHHHHhCCC---CcEEEeCC
Confidence 4688 86 4443 6899999999999999999999987 33332 23454 5566555544 333322 23444554
Q ss_pred CCCHHH----HHHHHHcCCCEEecCCCC--C--CC-ch----HHHHHHhcCCCEEEEcCC
Q 038230 296 TFYSKV----ASEAVGKGAHIVNDVSAG--Q--LD-PD----MYKVVAGLKVPYVAMHMR 342 (480)
Q Consensus 296 T~~~~v----~~aaL~~G~~iINdVsg~--~--~d-~~----m~~l~~~~~~~vVlmh~~ 342 (480)
+.+.+. ++.|-+.|+|-+--+... . .. ++ +-.++...+.|+++-+..
T Consensus 89 ~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P 148 (318)
T 3qfe_A 89 AHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFP 148 (318)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 434333 234445699977777652 1 12 23 334555678999987753
No 199
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=82.26 E-value=13 Score=36.22 Aligned_cols=112 Identities=13% Similarity=0.121 Sum_probs=69.9
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY 298 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~ 298 (480)
+|| |-+.|. .|.+...++++.++++|+|-|-++| ||.-+. ..+. +|..++. +.+.+... ++.+.+=+.+
T Consensus 8 vTP--f~~dg~-iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~~-~Ls~-eEr~~v~---~~~~~~~~--gviaGvg~~~ 76 (293)
T 1w3i_A 8 ITP--FTKDNR-IDKEKLKIHAENLIRKGIDKLFVNG-TTGLGP-SLSP-EEKLENL---KAVYDVTN--KIIFQVGGLN 76 (293)
T ss_dssp CCC--BCTTSS-BCHHHHHHHHHHHHHTTCCEEEESS-TTTTGG-GSCH-HHHHHHH---HHHHTTCS--CEEEECCCSC
T ss_pred eCC--CCCCCC-cCHHHHHHHHHHHHHcCCCEEEECc-cccChh-hCCH-HHHHHHH---HHHHHHcC--CEEEecCCCC
Confidence 688 765454 6899999999999999999999987 444332 3443 5666654 44455421 3566666655
Q ss_pred HH-HHHHH---HHcCCCEEecCCCCCC----CchHH----HHHHhcCCCEEEEcC
Q 038230 299 SK-VASEA---VGKGAHIVNDVSAGQL----DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 299 ~~-v~~aa---L~~G~~iINdVsg~~~----d~~m~----~l~~~~~~~vVlmh~ 341 (480)
.+ +++.+ -+.|+|-+--+...-. +++++ .++...+.|+++-+.
T Consensus 77 t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~ 131 (293)
T 1w3i_A 77 LDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNY 131 (293)
T ss_dssp HHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEEC
Confidence 33 33333 3359997766554211 23333 455567899998664
No 200
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=82.19 E-value=14 Score=36.12 Aligned_cols=152 Identities=16% Similarity=0.235 Sum_probs=82.0
Q ss_pred HHHHHHcCCCEEEeCC-----CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC------HHH----HHH
Q 038230 240 VRLMISEGADMIDIGA-----QSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY------SKV----ASE 304 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~-----eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~------~~v----~~a 304 (480)
|+-.-++|.|+|=+|. .-..|...+++.+|-+... +.+.+-. ...+|+.|+.. ++. +..
T Consensus 47 A~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~----~aV~r~~--~~~~vvaD~pfgsy~~s~~~a~~na~r 120 (281)
T 1oy0_A 47 ARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLV----RGVVRGA--PHALVVADLPFGSYEAGPTAALAAATR 120 (281)
T ss_dssp HHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHH----HHHHHHC--TTSEEEEECCTTSSTTCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHH----HHHHhcC--CCCeEEEECCCCcccCCHHHHHHHHHH
Confidence 3444578999998872 1234555677765544444 3334321 14678899864 554 234
Q ss_pred HHH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccc---hhhHHHHHHHHHHHHHHHHHHCCCC
Q 038230 305 AVG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQ---YDDVCKQVASELYSKVRDAELSGIP 380 (480)
Q Consensus 305 aL~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~---~~~v~~ev~~~l~~~i~~a~~~Gi~ 380 (480)
.++ +|++.|| +-+...-.+.++.+.+.+.||+. |..=+|++......+. ..+ ..+.+.++...++++|-.
T Consensus 121 l~~eaGa~aVk-lEdg~e~~~~I~al~~agIpV~g-HiGLtPqsv~~~ggf~v~grt~----~a~~~i~rA~a~~eAGA~ 194 (281)
T 1oy0_A 121 FLKDGGAHAVK-LEGGERVAEQIACLTAAGIPVMA-HIGFTPQSVNTLGGFRVQGRGD----AAEQTIADAIAVAEAGAF 194 (281)
T ss_dssp HHHTTCCSEEE-EEBSGGGHHHHHHHHHHTCCEEE-EEECCC--------------CH----HHHHHHHHHHHHHHHTCS
T ss_pred HHHHhCCeEEE-ECCcHHHHHHHHHHHHCCCCEEe-eecCCcceecccCCeEEEeCcH----HHHHHHHHHHHHHHcCCc
Confidence 455 7999999 44432223455556678999775 5533565543221110 011 124455667777899995
Q ss_pred CCCEEEecCCCCccChhHHHHHHHhc-ccCCCcEE
Q 038230 381 AWRIIIDPGLGFSKKAEHNLDILLGL-AASHAPIL 414 (480)
Q Consensus 381 ~~~IilDPgiGf~k~~~~~~~~lr~l-~~~g~Pil 414 (480)
.|+=+++ . . ++.+++ +.+.+|++
T Consensus 195 ---~ivlE~v---p-~----~~a~~it~~l~iP~i 218 (281)
T 1oy0_A 195 ---AVVMEMV---P-A----ELATQITGKLTIPTV 218 (281)
T ss_dssp ---EEEEESC---C-H----HHHHHHHHHCSSCEE
T ss_pred ---EEEEecC---C-H----HHHHHHHHhCCCCEE
Confidence 5555565 1 1 234444 34678865
No 201
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=82.11 E-value=15 Score=35.35 Aligned_cols=78 Identities=14% Similarity=0.226 Sum_probs=52.7
Q ss_pred hHHHHHHhcCCCEEEEcCCCCCC-ccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCC-EEEec--CCC-CccChhH
Q 038230 324 DMYKVVAGLKVPYVAMHMRGDPS-TMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWR-IIIDP--GLG-FSKKAEH 398 (480)
Q Consensus 324 ~m~~l~~~~~~~vVlmh~~g~p~-~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~-IilDP--giG-f~k~~~~ 398 (480)
+.++++++.|+++|++|..+.+. .... ....++-.+...+.|.+..+.|.+.|| + |.+-| .-+ |..+.++
T Consensus 118 ~~i~~A~~lGa~~v~~~~g~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~a~~~Gv---~~l~lE~~~~~~~~~~t~~~ 192 (316)
T 3qxb_A 118 RAIDMTAAMEVPATGMPFGSYSAADALN--PARREEIYAIARDMWIELAAYAKRQGL---SMLYVEPVPLATEFPSSAAD 192 (316)
T ss_dssp HHHHHHHHTTCCEEEECCBBCCHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHHTC---CEEEECCCSCTTBSSCSHHH
T ss_pred HHHHHHHHcCCCEEEecCCCcCccccCC--cccHHHHHHHHHHHHHHHHHHHHhcCC---eEEEEEecCCccccCCCHHH
Confidence 57889999999999988643221 0000 001133445567788888999999999 5 88888 433 5677777
Q ss_pred HHHHHHhc
Q 038230 399 NLDILLGL 406 (480)
Q Consensus 399 ~~~~lr~l 406 (480)
..++++.+
T Consensus 193 ~~~l~~~v 200 (316)
T 3qxb_A 193 AARLMADL 200 (316)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777776
No 202
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=82.03 E-value=13 Score=38.36 Aligned_cols=107 Identities=9% Similarity=0.100 Sum_probs=69.3
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMA---TKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVAS 303 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a---~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~ 303 (480)
+.++++..+.|++++++|-..|-+... .|+. ..-+..+++++....++++++... .+++|.+|.. +++.+.
T Consensus 144 ~~~~e~~~~~a~~~~~~Gf~~iKlk~g--~~~~~~~G~~~~~~~~~~d~e~v~avR~avG-~d~~L~vDan~~~t~~~A~ 220 (433)
T 3rcy_A 144 WTSADMAAESAADCVARGYTAVKFDPA--GPYTLRGGHMPAMTDISLSVEFCRKIRAAVG-DKADLLFGTHGQFTTAGAI 220 (433)
T ss_dssp TTCHHHHHHHHHHHHHTTCSEEEECCS--CCCBTTCCBCCCHHHHHHHHHHHHHHHHHHT-TSSEEEECCCSCBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCC--CCcccccCCCcchhhHHHHHHHHHHHHHHhC-CCCeEEEeCCCCCCHHHHH
Confidence 368999999999999999999998642 1210 001112345555666777776532 3789999953 455443
Q ss_pred HH---HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 304 EA---VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 304 aa---L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
+. |+ .|..+|-+-......+.+..+.+..++|+++-
T Consensus 221 ~~~~~Le~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~d 260 (433)
T 3rcy_A 221 RLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATG 260 (433)
T ss_dssp HHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHSSSCEEEC
T ss_pred HHHHHhhhcCCCEEECCCChhhHHHHHHHHhccCCCEEec
Confidence 33 33 38999976543321256777778889998873
No 203
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=81.92 E-value=10 Score=38.02 Aligned_cols=81 Identities=19% Similarity=0.130 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCC-------------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe------
Q 038230 235 AAVSQVRLMISEGADMIDIGAQS-------------TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD------ 295 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eS-------------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID------ 295 (480)
+-.+.|++..++|.|.|+|.+.- .|...-.-|.+...+.+..+|+++++... .+.||+|.
T Consensus 153 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG-~d~pV~vRls~~~~ 231 (349)
T 3hgj_A 153 AFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVP-RELPLFVRVSATDW 231 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSC-TTSCEEEEEESCCC
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhc-CCceEEEEeccccc
Confidence 34456777889999999998642 22221234566677778889999997632 25666552
Q ss_pred ---CCCHHH----HHHHHHcCCCEEecC
Q 038230 296 ---TFYSKV----ASEAVGKGAHIVNDV 316 (480)
Q Consensus 296 ---T~~~~v----~~aaL~~G~~iINdV 316 (480)
.++.+. +++.-++|+++|.-.
T Consensus 232 ~~~g~~~~~~~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 232 GEGGWSLEDTLAFARRLKELGVDLLDCS 259 (349)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 223333 444445699998844
No 204
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=81.91 E-value=3.5 Score=42.48 Aligned_cols=64 Identities=17% Similarity=0.310 Sum_probs=46.9
Q ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCEEe
Q 038230 237 VSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~iIN 314 (480)
.++++.++++|+|+|-++.....| ..+...|+.+++. .++||.+ ....++.++.+.++|+|.|-
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~-----------~~~~e~I~~ik~~---~~i~Vi~g~V~t~e~A~~a~~aGAD~I~ 210 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHS-----------LNIIRTLKEIKSK---MNIDVIVGNVVTEEATKELIENGADGIK 210 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSB-----------HHHHHHHHHHHTT---CCCEEEEEEECSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCc-----------ccHHHHHHHHHhc---CCCeEEEeecCCHHHHHHHHHcCCCEEE
Confidence 568899999999999886321111 1233456677765 2677776 67789999999999999986
No 205
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=81.41 E-value=4.7 Score=40.16 Aligned_cols=98 Identities=22% Similarity=0.276 Sum_probs=70.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQ-----STRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEA 305 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~e-----StrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aa 305 (480)
.+.+++.+.++++.+.|++.|-+-.. .+.|.....-.++++.+ +++..++. ++++.+=....+.++.+
T Consensus 169 ~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~---~~~~A~~~----g~~v~~H~~~~~~i~~~ 241 (423)
T 3feq_A 169 DGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRA---IVDEAEAA----NTYVMAHAYTGRAIARA 241 (423)
T ss_dssp CSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHH---HHHHHHHT----TCCEEEEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHH---HHHHHHHC----CCeEEEEeCChHHHHHH
Confidence 46789999999999999998887532 11121121222355554 45666665 88999988889999999
Q ss_pred HHcCCCEEecCCCCCCCchHHHHHHhcCCCEE
Q 038230 306 VGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYV 337 (480)
Q Consensus 306 L~~G~~iINdVsg~~~d~~m~~l~~~~~~~vV 337 (480)
+++|++.|--... .+++.++.+++.++.++
T Consensus 242 l~~g~~~i~H~~~--~~~~~~~~l~~~gv~~~ 271 (423)
T 3feq_A 242 VRCGVRTIEHGNL--VDEAAAKLMHEHGAFVV 271 (423)
T ss_dssp HHHTCCEEEEEEE--CCHHHHHHHHHHTCEEE
T ss_pred HHcCCCEEeccCc--CCHHHHHHHHHCCCccc
Confidence 9999987764432 36788999999998875
No 206
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=81.39 E-value=11 Score=38.59 Aligned_cols=108 Identities=15% Similarity=0.120 Sum_probs=69.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEe--CCCC-------------------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDI--GAQS-------------------TRPMATKISAEKELERLIPVLEAVLTMPEMEG 289 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDI--G~eS-------------------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~ 289 (480)
.++++..+.|++++++|-..+-+ |... ..|+....+..+++++....++++++... .+
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G-~d 220 (418)
T 3r4e_A 142 SDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYG-FD 220 (418)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHC-SS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcC-CC
Confidence 46899999999999999998865 4310 00111112333456666666777776532 37
Q ss_pred CeEEEeCC---CHHHHHHH---HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 290 KLVSVDTF---YSKVASEA---VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 290 ~pISIDT~---~~~v~~aa---L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
++|.+|.. +++.+.+. |+ .|..+|-.-......+.+..+.+..++|+++-
T Consensus 221 ~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~d 277 (418)
T 3r4e_A 221 HHLLHDGHHRYTPQEAANLGKMLEPYQLFWLEDCTPAENQEAFRLVRQHTVTPLAVG 277 (418)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEESCSCCSSGGGGHHHHHHCCSCEEEC
T ss_pred CeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEECCCCccCHHHHHHHHhcCCCCEEEc
Confidence 89999964 45544333 32 38999976543322367888888889998873
No 207
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=81.32 E-value=35 Score=33.38 Aligned_cols=107 Identities=14% Similarity=0.149 Sum_probs=68.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCC--------CCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE--EeCC-C
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRP--------MATKISAEKELERLIPVLEAVLTMPEMEGKLVS--VDTF-Y 298 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP--------~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS--IDT~-~ 298 (480)
|.+++.+.+.++++++.||.-+=|=.+..-| +...++.++-.+|+.-++++-.. .+..|- -|++ .
T Consensus 86 yg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~----~~~~i~aRtda~~a 161 (290)
T 2hjp_A 86 FGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARAD----RDFVVIARVEALIA 161 (290)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSS----TTSEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhccc----CCcEEEEeehHhhc
Confidence 5688999999999999999998875543111 34456665556666555544322 233332 3665 2
Q ss_pred ----HHHHHHHHH---cCCCEEecCCC-CCCCchHHHHHHhcC--CCEEEEcC
Q 038230 299 ----SKVASEAVG---KGAHIVNDVSA-GQLDPDMYKVVAGLK--VPYVAMHM 341 (480)
Q Consensus 299 ----~~v~~aaL~---~G~~iINdVsg-~~~d~~m~~l~~~~~--~~vVlmh~ 341 (480)
.+.++.|.. +||++|- +-+ -...+++..++++.+ +|+++...
T Consensus 162 ~~g~~~ai~Ra~ay~eAGAd~i~-~e~~~~~~~~~~~i~~~~~~~vP~i~n~~ 213 (290)
T 2hjp_A 162 GLGQQEAVRRGQAYEEAGADAIL-IHSRQKTPDEILAFVKSWPGKVPLVLVPT 213 (290)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEE-ECCCCSSSHHHHHHHHHCCCSSCEEECGG
T ss_pred cccHHHHHHHHHHHHHcCCcEEE-eCCCCCCHHHHHHHHHHcCCCCCEEEecc
Confidence 566655544 5999997 444 332367888888888 89887543
No 208
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=80.52 E-value=12 Score=38.23 Aligned_cols=106 Identities=9% Similarity=0.081 Sum_probs=70.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEe--CCCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDI--GAQST-----------RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDI--G~eSt-----------rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~ 297 (480)
.++++..+.|++++++|-..+-+ |..+. .|+ ...+.++++++....++++++... .+++|.+|..
T Consensus 132 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~d~~~v~avR~a~G-~d~~l~vDan 209 (401)
T 3sbf_A 132 DTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEG-SYYDQDQYMDNTLTMFKSLREKYG-NQFHILHDVH 209 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSS-EECCHHHHHHHHHHHHHHHHHHHT-TSSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccc-ccccchHHHHHHHHHHHHHHHHcC-CCCEEEEECC
Confidence 46899999999999999998775 43211 112 234555667777777788887532 3789999964
Q ss_pred ---CHHHHHHH---HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 298 ---YSKVASEA---VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 298 ---~~~v~~aa---L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+++.+.+. |+ .|..+|-.-......+.+..+.+..++|++.
T Consensus 210 ~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~ 257 (401)
T 3sbf_A 210 ERLFPNQAIQFAKEVEQYKPYFIEDILPPNQTEWLDNIRSQSSVSLGL 257 (401)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSCEECSSCTTCGGGHHHHHTTCCCCEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEECCCChhHHHHHHHHHhhCCCCEEe
Confidence 45444333 32 3888887654332226678888888888876
No 209
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=80.49 E-value=3.7 Score=41.36 Aligned_cols=103 Identities=14% Similarity=0.170 Sum_probs=63.1
Q ss_pred ecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC-
Q 038230 218 NLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT- 296 (480)
Q Consensus 218 N~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT- 296 (480)
=++|+-|.+|| .+.+++++.|+.+.+. +|+|++-...+.+......+...+ +.++.+++. .++||..--
T Consensus 216 Rls~~~~~~~g--~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~----~~~~~ir~~---~~iPVi~~Gg 285 (343)
T 3kru_A 216 RVSADDYMEGG--INIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQV----KYAETIKKR---CNIKTSAVGL 285 (343)
T ss_dssp EEECCCSSTTS--CCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTH----HHHHHHHHH---HTCEEEEESS
T ss_pred EeechhhhccC--ccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceee----hHHHHHHHh---cCcccceeee
Confidence 45666677776 5789999999999999 999999211222210011111111 233444543 256766633
Q ss_pred -CCHHHHHHHHHcC-CCEEecCCCCCCCchHHHHHH
Q 038230 297 -FYSKVASEAVGKG-AHIVNDVSAGQLDPDMYKVVA 330 (480)
Q Consensus 297 -~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l~~ 330 (480)
++++.++++|+.| +|+|-=-.+.-.+|.+..-++
T Consensus 286 i~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 286 ITTQELAEEILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp CCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred eeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 5799999999997 898864443333566655544
No 210
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=80.31 E-value=49 Score=33.04 Aligned_cols=95 Identities=16% Similarity=0.219 Sum_probs=63.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHH--
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEA-- 305 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aa-- 305 (480)
.++++..++|+++++.|-..+-+-.. .+.+++++++..+-+.+- .+++|.+|. ++++.+.+.
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG--------~~~~~d~~~v~avR~~~g-----~~~~l~vDaN~~~~~~~A~~~~~ 205 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVG--------GSKELDVERIRMIREAAG-----DSITLRIDANQGWSVETAIETLT 205 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECC--------SCHHHHHHHHHHHHHHHC-----SSSEEEEECTTCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEec--------CCHHHHHHHHHHHHHHhC-----CCCeEEEECCCCCChHHHHHHHH
Confidence 47899999999999999999887531 135677777644333332 278999995 345444333
Q ss_pred -HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 306 -VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 306 -L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
|+ .|..+|-+-......+.+..+.++.++|+++
T Consensus 206 ~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~ 240 (368)
T 3q45_A 206 LLEPYNIQHCEEPVSRNLYTALPKIRQACRIPIMA 240 (368)
T ss_dssp HHGGGCCSCEECCBCGGGGGGHHHHHHTCSSCEEE
T ss_pred HHhhcCCCEEECCCChhHHHHHHHHHhhCCCCEEE
Confidence 32 3888887644322125678888888999886
No 211
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=80.30 E-value=22 Score=33.75 Aligned_cols=89 Identities=22% Similarity=0.168 Sum_probs=51.5
Q ss_pred HHHHHHHHcCCCEE--EeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC----------CCHHHH---
Q 038230 238 SQVRLMISEGADMI--DIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT----------FYSKVA--- 302 (480)
Q Consensus 238 ~~A~~~v~~GAdiI--DIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT----------~~~~v~--- 302 (480)
+.+++.++.||+.| .+...+ .+.++-++.+..+++..++. ++|+-+-+ .+++.+
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~-------~~~~~~~~~~~~v~~~~~~~----g~~viv~~~~~G~~l~~~~~~~~~~~~ 171 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGS-------DEDWEAYRDLGMIAETCEYW----GMPLIAMMYPRGKHIQNERDPELVAHA 171 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETS-------TTHHHHHHHHHHHHHHHHHH----TCCEEEEEEECSTTCSCTTCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEecCC-------CCHHHHHHHHHHHHHHHHHc----CCCEEEEeCCCCcccCCCCCHhHHHHH
Confidence 35566778999999 543221 12333344455555555543 56666544 344333
Q ss_pred -HHHHHcCCCEEecCCCCCCC-chHHHHHHhcCCCEEEE
Q 038230 303 -SEAVGKGAHIVNDVSAGQLD-PDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 303 -~aaL~~G~~iINdVsg~~~d-~~m~~l~~~~~~~vVlm 339 (480)
+.|.+.|+++|- ++.. .+ +.+.++++..++|+|+.
T Consensus 172 a~~a~~~Gad~i~-~~~~-~~~~~l~~i~~~~~ipvva~ 208 (273)
T 2qjg_A 172 ARLGAELGADIVK-TSYT-GDIDSFRDVVKGCPAPVVVA 208 (273)
T ss_dssp HHHHHHTTCSEEE-ECCC-SSHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHcCCCEEE-ECCC-CCHHHHHHHHHhCCCCEEEE
Confidence 667778999875 3321 24 34556666678898873
No 212
>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A*
Probab=80.25 E-value=5.9 Score=41.98 Aligned_cols=125 Identities=11% Similarity=0.109 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHH-cCCC-EEEeCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcC
Q 038230 233 VEAAVSQVRLMIS-EGAD-MIDIGAQSTRPMATKISA-EKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKG 309 (480)
Q Consensus 233 ~e~a~~~A~~~v~-~GAd-iIDIG~eStrP~a~~v~~-~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G 309 (480)
.+.+.+..+++.+ .|.| ++-|...||.|..+..+. -..++.+. ++|.+. +-.|+ ...--+.+|+++|
T Consensus 220 ve~ir~DIr~Fk~~~~ldrvVVlwtAsTE~~~~~~~g~~~t~~~l~---~ai~~~----~~eis---pS~~YA~AAl~aG 289 (533)
T 1p1j_A 220 LQRIRRDIQNFKEENALDKVIVLWTANTERYVEVSPGVNDTMENLL---QSIKND----HEEIA---PSTIFAAASILEG 289 (533)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEECSCCCCCCCCCTTTTSSHHHHH---HHHHTT----CTTCC---HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEeCcCccCCCCCccccccCHHHHH---HHHhcC----CccCC---hHHHHHHHHHhcC
Confidence 4555556677766 7855 888899999997764431 12344443 444443 21222 3334567889999
Q ss_pred CCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 038230 310 AHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRII 385 (480)
Q Consensus 310 ~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Ii 385 (480)
+..||-.-.....|.+.+++.+.|++++-=.... .+| ++. .-+++.+...|+....++
T Consensus 290 ~~fIN~sP~~t~~P~~~elae~~gvpI~GDD~KS-GqT-----------~lk------svLa~~l~~RGlkv~~~~ 347 (533)
T 1p1j_A 290 VPYINGSPQNTFVPGLVQLAEHEGTFIAGDDLKS-GQT-----------KLK------SVLAQFLVDAGIKPVSIA 347 (533)
T ss_dssp CCEEECSCSCCCCHHHHHHHHHHTCCEEESSBCC-SHH-----------HHH------HHHHHHHHHTTCEEEEEE
T ss_pred CceeecCCcccCCHHHHHHHHHhCCceecccccc-CCc-----------hhH------HHHHHHHHHcCCceeEEE
Confidence 9999987766667999999999999988633221 111 111 233556678999865554
No 213
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=80.23 E-value=9.5 Score=38.71 Aligned_cols=105 Identities=14% Similarity=0.048 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCCC-------------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC--
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQS-------------TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF-- 297 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~eS-------------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~-- 297 (480)
.++..+.|+..+++|.|.|+|++.- .|...-.-|.+...+.+..+|+++++... .+ ||+|.-.
T Consensus 166 i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg-~~-~V~vrls~~ 243 (376)
T 1icp_A 166 VNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIG-SD-RVGIRISPF 243 (376)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC-GG-GEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhc-CC-ceEEEeccc
Confidence 3566677888899999999998742 12111123456777788899999987632 13 6665542
Q ss_pred ---------C-----HHHHHHHHHcCCCEEecCCCCC-------CC-chHHHHHHhcCCCEEEE
Q 038230 298 ---------Y-----SKVASEAVGKGAHIVNDVSAGQ-------LD-PDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 298 ---------~-----~~v~~aaL~~G~~iINdVsg~~-------~d-~~m~~l~~~~~~~vVlm 339 (480)
. .+.+++.-++|+++|.-..+.. .. +.+..+.+..+.+|+..
T Consensus 244 ~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~ 307 (376)
T 1icp_A 244 AHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVA 307 (376)
T ss_dssp CCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEE
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEe
Confidence 1 2334444456999997543311 01 22344555577887764
No 214
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=80.10 E-value=9.3 Score=35.79 Aligned_cols=97 Identities=11% Similarity=0.196 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHcCCCEEE--eCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE--eC--CCH----HHH
Q 038230 233 VEAAVSQVRLMISEGADMID--IGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV--DT--FYS----KVA 302 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiID--IG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI--DT--~~~----~v~ 302 (480)
.+.-...+++.+++|||.|| +|..+.+-+ +++++...++.+++... ++++-+ .| .+. +.+
T Consensus 69 ~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~--------~~~~~~~~i~~v~~a~~--pv~vKvi~e~~~l~~~~~~~~a 138 (225)
T 1mzh_A 69 TSVKVKEAVEAVRDGAQELDIVWNLSAFKSE--------KYDFVVEELKEIFRETP--SAVHKVIVETPYLNEEEIKKAV 138 (225)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCHHHHHTT--------CHHHHHHHHHHHHHTCT--TSEEEEECCGGGCCHHHHHHHH
T ss_pred hhhhHHHHHHHHHcCCCEEEEEecHHHHhcC--------ChHHHHHHHHHHHHHhc--CceEEEEEeCCCCCHHHHHHHH
Confidence 34445567888899999999 565332221 23455556777776532 344433 32 333 446
Q ss_pred HHHHHcCCCEEecCCCCC---CCchHHHHHHhc---CCCEEEE
Q 038230 303 SEAVGKGAHIVNDVSAGQ---LDPDMYKVVAGL---KVPYVAM 339 (480)
Q Consensus 303 ~aaL~~G~~iINdVsg~~---~d~~m~~l~~~~---~~~vVlm 339 (480)
+.+.++|+|.|---+|.. ...+.+..+++. ++||+..
T Consensus 139 ~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~ 181 (225)
T 1mzh_A 139 EICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKAS 181 (225)
T ss_dssp HHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence 666777999994222221 134555555553 5777764
No 215
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=80.02 E-value=2.9 Score=41.51 Aligned_cols=48 Identities=17% Similarity=0.032 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHcC
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQSTRPM-ATKISAEKELERLIPVLEAVLTM 284 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~eStrP~-a~~v~~~eE~~rl~~vi~~l~~~ 284 (480)
.++..+.|++. ++|+|.|+|++.|...+ .. ..+..+.+..+++.+++.
T Consensus 152 ~~~~~~aa~~~-~~g~d~iein~~sP~~~g~~---~~~~~~~~~~il~~vr~~ 200 (336)
T 1f76_A 152 KDDYLICMEKI-YAYAGYIAINISSPNTPGLR---TLQYGEALDDLLTAIKNK 200 (336)
T ss_dssp HHHHHHHHHHH-GGGCSEEEEECCCSSSTTGG---GGGSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hccCCEEEEEccCCCCCCcc---cccCHHHHHHHHHHHHHH
Confidence 56666666655 45999999998653321 11 112245555666666654
No 216
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=79.99 E-value=3.7 Score=47.22 Aligned_cols=80 Identities=14% Similarity=0.063 Sum_probs=52.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCC-CCCC--CCHHHHHHHHHHHHHHHHcCCcCCCCeEEE----eCCC-HHHHH
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRP-MATK--ISAEKELERLIPVLEAVLTMPEMEGKLVSV----DTFY-SKVAS 303 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP-~a~~--v~~~eE~~rl~~vi~~l~~~~~~~~~pISI----DT~~-~~v~~ 303 (480)
+.++..+.|+...++|||+|+|++.+... .... -+.....+.+..+++.+++. .++||.+ |..+ .++++
T Consensus 646 ~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~---~~~Pv~vK~~~~~~~~~~~a~ 722 (1025)
T 1gte_A 646 NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA---VQIPFFAKLTPNVTDIVSIAR 722 (1025)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH---CSSCEEEEECSCSSCHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh---hCCceEEEeCCChHHHHHHHH
Confidence 56778888888889999999999855221 1000 01113356677788888875 3678776 4443 45677
Q ss_pred HHHHcCCCEEe
Q 038230 304 EAVGKGAHIVN 314 (480)
Q Consensus 304 aaL~~G~~iIN 314 (480)
++.++|++.|-
T Consensus 723 ~~~~~G~d~i~ 733 (1025)
T 1gte_A 723 AAKEGGADGVT 733 (1025)
T ss_dssp HHHHHTCSEEE
T ss_pred HHHHcCCCEEE
Confidence 77788888664
No 217
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=79.97 E-value=8 Score=40.09 Aligned_cols=104 Identities=12% Similarity=0.146 Sum_probs=68.7
Q ss_pred CeEEEeCCCHHHHHHHHHc----CCCEEecCCCCCCC--------------chHHHHHHhcCCCE--EEEc-CCCCCCcc
Q 038230 290 KLVSVDTFYSKVASEAVGK----GAHIVNDVSAGQLD--------------PDMYKVVAGLKVPY--VAMH-MRGDPSTM 348 (480)
Q Consensus 290 ~pISIDT~~~~v~~aaL~~----G~~iINdVsg~~~d--------------~~m~~l~~~~~~~v--Vlmh-~~g~p~~~ 348 (480)
-..++.+.+++++++++++ +.++|--++....+ .-+..++.+.++|+ |++| +.|.|...
T Consensus 15 av~afn~~n~e~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w 94 (420)
T 2fiq_A 15 GICSVCSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDHLGPNCW 94 (420)
T ss_dssp CEEEECCCCHHHHHHHHHHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGG
T ss_pred EEEEeccCCHHHHHHHHHHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCCCCCccc
Confidence 4579999999999999986 78888777665422 12445666789993 4445 34555433
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCC-ccC--hhHHHHH
Q 038230 349 QNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGF-SKK--AEHNLDI 402 (480)
Q Consensus 349 ~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf-~k~--~~~~~~~ 402 (480)
+..+ .++-++..++.+..+.++|++ .|-+|.-.+. +.+ .++|...
T Consensus 95 ~~~~-------~~~am~~a~e~i~~aI~aGFt--SVMiD~S~~~~~~~~pl~eNi~~ 142 (420)
T 2fiq_A 95 QQEN-------VDAAMEKSVELVKAYVRAGFS--KIHLDASMSCAGDPIPLAPETVA 142 (420)
T ss_dssp TTSB-------HHHHHHHHHHHHHHHHHTTCC--EEEECCCSCCBTCCSSCCHHHHH
T ss_pred cccc-------hhhhhhhHHHHHHHHHHhCCC--EEEECCCCCCCCCCCCccHHHHH
Confidence 3221 234456677889999999998 9999986542 222 3555533
No 218
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=79.92 E-value=6.8 Score=41.93 Aligned_cols=88 Identities=17% Similarity=0.193 Sum_probs=56.0
Q ss_pred EEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCe
Q 038230 212 SVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKL 291 (480)
Q Consensus 212 ~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~p 291 (480)
.+.|.+..+ |+.++ +++.+++.++++.+.||++|-|.= |.-. ....++.+++ +.+++... .++|
T Consensus 159 ~v~~~i~~~-----~~~~~-~~e~~~~~a~~l~~~Gad~I~L~D--T~G~----~~P~~v~~lv---~~l~~~~p-~~i~ 222 (539)
T 1rqb_A 159 HAQGTICYT-----ISPVH-TVEGYVKLAGQLLDMGADSIALKD--MAAL----LKPQPAYDII---KAIKDTYG-QKTQ 222 (539)
T ss_dssp EEEEEEECC-----CSTTC-CHHHHHHHHHHHHHTTCSEEEEEE--TTCC----CCHHHHHHHH---HHHHHHHC-TTCC
T ss_pred eEEEEEEee-----eCCCC-CHHHHHHHHHHHHHcCCCEEEeCC--CCCC----cCHHHHHHHH---HHHHHhcC-CCce
Confidence 455555333 44454 899999999999999999998862 1111 1124555554 44444321 1688
Q ss_pred EEE---eCCCHH--HHHHHHHcCCCEEec
Q 038230 292 VSV---DTFYSK--VASEAVGKGAHIVND 315 (480)
Q Consensus 292 ISI---DT~~~~--v~~aaL~~G~~iINd 315 (480)
|++ ||+--. ...+|+++|+++|..
T Consensus 223 I~~H~Hnd~GlAvAN~laAveAGa~~VD~ 251 (539)
T 1rqb_A 223 INLHCHSTTGVTEVSLMKAIEAGVDVVDT 251 (539)
T ss_dssp EEEEEBCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred EEEEeCCCCChHHHHHHHHHHhCCCEEEE
Confidence 998 455444 457888999999863
No 219
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=79.66 E-value=12 Score=38.02 Aligned_cols=105 Identities=16% Similarity=0.085 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCCC-------------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQS-------------TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--- 296 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~eS-------------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--- 296 (480)
.++..+.|+..+++|+|.|+|++.- .|...-.-|.+...+.+..+++++++... .+ ||+|.-
T Consensus 165 i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg-~~-~v~vrls~~ 242 (377)
T 2r14_A 165 VEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFG-PE-RVGIRLTPF 242 (377)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC-GG-GEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcC-CC-cEEEEeccc
Confidence 3556677788889999999997631 22221123456677778889999987632 12 666641
Q ss_pred --C-------C----HHHHHHHHHcCCCEEecCCCCC------CCchH-HHHHHhcCCCEEEE
Q 038230 297 --F-------Y----SKVASEAVGKGAHIVNDVSAGQ------LDPDM-YKVVAGLKVPYVAM 339 (480)
Q Consensus 297 --~-------~----~~v~~aaL~~G~~iINdVsg~~------~d~~m-~~l~~~~~~~vVlm 339 (480)
+ . .+.+++.-++|+++|.-..+.. ...++ ..+.+..+.+||..
T Consensus 243 ~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~ 305 (377)
T 2r14_A 243 LELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYC 305 (377)
T ss_dssp CCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEE
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEE
Confidence 1 1 2234455557999998543310 01233 34444567887764
No 220
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=79.65 E-value=25 Score=40.99 Aligned_cols=193 Identities=12% Similarity=0.108 Sum_probs=107.6
Q ss_pred CCHHHHHHHHHHHHHc--CCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC----------CC
Q 038230 231 QSVEAAVSQVRLMISE--GADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT----------FY 298 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~--GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT----------~~ 298 (480)
++.++.++.|+.+.+. |-.-|+..|..+..-.-+...+++|+++..+.+.+. +.+++.=. +.
T Consensus 552 ~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~~------~~~~~~l~R~~n~vgy~~~p 625 (1150)
T 3hbl_A 552 VRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIP------NVLFQMLLRASNAVGYKNYP 625 (1150)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCC------SSEEEEEEETTTBTCSSCCC
T ss_pred CCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhCC------CCeEEEEeccccccccccCC
Confidence 6789999999999998 888888754333210001112356777655443332 44444322 23
Q ss_pred HH----HHHHHHHcCCCEEecCCCCCCC---chHHHHHHhcCCCE--EEEcCCCCCCccccccccchhhHHHHHHHHHHH
Q 038230 299 SK----VASEAVGKGAHIVNDVSAGQLD---PDMYKVVAGLKVPY--VAMHMRGDPSTMQNEENLQYDDVCKQVASELYS 369 (480)
Q Consensus 299 ~~----v~~aaL~~G~~iINdVsg~~~d---~~m~~l~~~~~~~v--Vlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~ 369 (480)
.. -+++|.++|+++|.=..+.+.- ......+++.+.-+ .++...+.. +++.... | + .+++.+
T Consensus 626 d~v~~~~v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g~~~~~~i~~~~~~~-~pe~~~~--~-~-----~~~~~~ 696 (1150)
T 3hbl_A 626 DNVIHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDIL-NPERSNI--Y-T-----LEYYVK 696 (1150)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTT-CTTTCSS--S-S-----HHHHHH
T ss_pred chhHHHHHHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHhhheeEEEeeccccc-ChhhcCC--C-C-----HHHHHH
Confidence 33 4778888999998755554422 34566667776433 245554321 1111000 1 1 267778
Q ss_pred HHHHHHHCCCCCCCEEE-ecCCCCccChhHHHHHHHhc-ccCCCcEEEeeccccccccccCCCCcCcccHHHHHHHHHHH
Q 038230 370 KVRDAELSGIPAWRIII-DPGLGFSKKAEHNLDILLGL-AASHAPILIGPSRKRFLGEICNRPSADERDPATIASITAGV 447 (480)
Q Consensus 370 ~i~~a~~~Gi~~~~Iil-DPgiGf~k~~~~~~~~lr~l-~~~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~ 447 (480)
.++.+.++|.. .|.| |- .|..+ +.+..++++.+ +.+++|+=+ |. .+-.+...|.+..|+
T Consensus 697 ~a~~~~~~Ga~--~i~l~Dt-~G~~~-P~~~~~lv~~l~~~~~~~i~~-H~--------------Hnt~G~a~An~laA~ 757 (1150)
T 3hbl_A 697 LAKELEREGFH--ILAIKDM-AGLLK-PKAAYELIGELKSAVDLPIHL-HT--------------HDTSGNGLLTYKQAI 757 (1150)
T ss_dssp HHHHHHHTTCS--EEEEEET-TCCCC-HHHHHHHHHHHHHHCCSCEEE-EE--------------CBTTSCHHHHHHHHH
T ss_pred HHHHHHHcCCC--eeeEcCc-cCCCC-HHHHHHHHHHHHHhcCCeEEE-Ee--------------CCCCcHHHHHHHHHH
Confidence 88889999986 4544 64 34333 34445666666 245777643 11 111122344456678
Q ss_pred HcCCcEEEcC
Q 038230 448 LGGANIVRVH 457 (480)
Q Consensus 448 ~~Ga~IlRvH 457 (480)
+.||+++.+.
T Consensus 758 ~aGa~~vD~a 767 (1150)
T 3hbl_A 758 DAGVDIIDTA 767 (1150)
T ss_dssp HTTCSEEEEB
T ss_pred HhCCCEEEEe
Confidence 8899888664
No 221
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=79.59 E-value=22 Score=34.00 Aligned_cols=139 Identities=15% Similarity=0.092 Sum_probs=69.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHcCCcCCCC-eEEEeCC--------C-HH
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPM-ATKISAEKELERLIPVLEAVLTMPEMEGK-LVSVDTF--------Y-SK 300 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~-a~~v~~~eE~~rl~~vi~~l~~~~~~~~~-pISIDT~--------~-~~ 300 (480)
+.+++++.+ .+.|.+.|++...+.+.. .... .+++++++... +++. ++ .+++-+. + ++
T Consensus 19 ~~~~~l~~~---~~~G~~~vEl~~~~~~~~~~~~~-~~~~~~~~~~~---l~~~----gl~~~~~h~~~~~nl~s~d~~~ 87 (303)
T 3aal_A 19 MLLAASEEA---ASYGANTFMIYTGAPQNTKRKSI-EELNIEAGRQH---MQAH----GIEEIVVHAPYIINIGNTTNLD 87 (303)
T ss_dssp THHHHHHHH---HHTTCSEEEEESSCTTCCCCCCS-GGGCHHHHHHH---HHHT----TCCEEEEECCTTCCTTCSSCHH
T ss_pred cHHHHHHHH---HHcCCCEEEEcCCCCCccCCCCC-CHHHHHHHHHH---HHHc----CCceEEEeccccccCCCCCcHH
Confidence 566666555 467999999954332111 1111 13445555433 3443 56 5665432 1 33
Q ss_pred HHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCC
Q 038230 301 VASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIP 380 (480)
Q Consensus 301 v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~ 380 (480)
+-+++++. -.+.+++|++.|+++|++|....+.. .+++..+...+.+.+..+.+ .|+
T Consensus 88 ~r~~~~~~-------------~~~~i~~A~~lGa~~vv~h~g~~~~~-------~~~~~~~~~~~~l~~l~~~a--~gv- 144 (303)
T 3aal_A 88 TFSLGVDF-------------LRAEIERTEAIGAKQLVLHPGAHVGA-------GVEAGLRQIIRGLNEVLTRE--QNV- 144 (303)
T ss_dssp HHHHHHHH-------------HHHHHHHHHHHTCSEEEECCEECTTS-------CHHHHHHHHHHHHHHHCCSS--CSC-
T ss_pred HHHHHHHH-------------HHHHHHHHHHcCCCEEEECCCcCCCC-------CHHHHHHHHHHHHHHHHHhC--CCC-
Confidence 22222211 13457788888888888876322211 11223333334444443333 577
Q ss_pred CCCEEEecCCCC----ccChhHHHHHHHhc
Q 038230 381 AWRIIIDPGLGF----SKKAEHNLDILLGL 406 (480)
Q Consensus 381 ~~~IilDPgiGf----~k~~~~~~~~lr~l 406 (480)
+|.+-|.-|+ +.+.++-.++++.+
T Consensus 145 --~l~lEn~~~~~~~~~~t~~~~~~li~~v 172 (303)
T 3aal_A 145 --QIALETMAGKGSECGRTFEELAYIIDGV 172 (303)
T ss_dssp --EEEEECCCCCTTEECSSHHHHHHHHHHC
T ss_pred --EEEEecCCCCCCccCCCHHHHHHHHHhc
Confidence 4888775333 34556656666654
No 222
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=79.44 E-value=1.2 Score=44.15 Aligned_cols=89 Identities=16% Similarity=0.045 Sum_probs=52.6
Q ss_pred HHHHHHHHcCCCEEEeCC-CCCCC----C-CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcC
Q 038230 238 SQVRLMISEGADMIDIGA-QSTRP----M-ATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKG 309 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~-eStrP----~-a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G 309 (480)
+.|+.+.++||+-|-+=- .||-. | .-..+ . ..|+.+++. .++||... ...-+.++...++|
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~----~----~~i~~i~~~---v~iPvl~k~~i~~ide~qil~aaG 100 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVD----P----LKIEEIRKC---ISINVLAKVRIGHFVEAQILEELK 100 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCC----H----HHHHHHHTT---CCSEEEEEEETTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCC----H----HHHHHHHHh---cCCCEEEeccCCcHHHHHHHHHcC
Confidence 678999999999876630 01111 1 00111 1 235566766 48998854 12267777778899
Q ss_pred CCEEecCCCCCCCchHHHHHHh--cCCCEEE
Q 038230 310 AHIVNDVSAGQLDPDMYKVVAG--LKVPYVA 338 (480)
Q Consensus 310 ~~iINdVsg~~~d~~m~~l~~~--~~~~vVl 338 (480)
||.|| .+.....+++...+++ ++..+|+
T Consensus 101 AD~Id-~s~~~~~~~li~~i~~~~~g~~vvv 130 (297)
T 4adt_A 101 VDMLD-ESEVLTMADEYNHINKHKFKTPFVC 130 (297)
T ss_dssp CSEEE-EETTSCCSCSSCCCCGGGCSSCEEE
T ss_pred CCEEE-cCCCCCHHHHHHHHHhcCCCCeEEE
Confidence 99994 4433223566666666 4666665
No 223
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=79.31 E-value=23 Score=34.95 Aligned_cols=97 Identities=19% Similarity=0.132 Sum_probs=69.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCC-----C-CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQS-----T-RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASE 304 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eS-----t-rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~a 304 (480)
.+.+++.+..++..+.|++.|.+-... + .++....+ ++++.+ +++..++. ++++.+=......++.
T Consensus 163 ~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~-~~~l~~---~~~~A~~~----g~~v~~H~~~~~~i~~ 234 (408)
T 3be7_A 163 DSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFT-LEEMKA---IVDEAHNH----GMKVAAHAHGLIGIKA 234 (408)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSC-HHHHHH---HHHHHHHT----TCEEEEEECSHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCC-HHHHHH---HHHHHHHC----CCEEEEEeCCHHHHHH
Confidence 456777777788888999998774211 1 12222333 355554 45555654 8999999999999999
Q ss_pred HHHcCCCEEecCCCCCCCchHHHHHHhcCCCEE
Q 038230 305 AVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYV 337 (480)
Q Consensus 305 aL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vV 337 (480)
+++.|++.|-..... +++.++.+++.|+.++
T Consensus 235 ~~~~g~~~i~H~~~~--~~~~i~~~~~~g~~v~ 265 (408)
T 3be7_A 235 AIKAGVDSVEHASFI--DDETIDMAIKNNTVLS 265 (408)
T ss_dssp HHHHTCSEEEECTTC--CHHHHHHHHHTTCEEE
T ss_pred HHHcCCCEEEECCCC--CHHHHHHHHHCCCEEe
Confidence 999999988776543 5889999999998765
No 224
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=79.26 E-value=4 Score=37.13 Aligned_cols=55 Identities=16% Similarity=0.227 Sum_probs=40.1
Q ss_pred HHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEe
Q 038230 239 QVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iIN 314 (480)
.+++..+.|||+| ++. +.. . .+++..++. ++|+..+...++.++.|++.|+++|.
T Consensus 75 ~~~~a~~~Gad~i-v~~-----~~~-----~------~~~~~~~~~----g~~vi~g~~t~~e~~~a~~~Gad~vk 129 (205)
T 1wa3_A 75 QCRKAVESGAEFI-VSP-----HLD-----E------EISQFCKEK----GVFYMPGVMTPTELVKAMKLGHTILK 129 (205)
T ss_dssp HHHHHHHHTCSEE-ECS-----SCC-----H------HHHHHHHHH----TCEEECEECSHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEE-EcC-----CCC-----H------HHHHHHHHc----CCcEECCcCCHHHHHHHHHcCCCEEE
Confidence 3566677999999 874 221 1 234444543 78888888889999999999999985
No 225
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=79.21 E-value=47 Score=33.74 Aligned_cols=108 Identities=10% Similarity=0.094 Sum_probs=67.0
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPM-ATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEA 305 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~-a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aa 305 (480)
..++++..+.|++++++|-..+-+-......+ .......+++++-...++++++... .+++|.+|.. +++.+.+.
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G-~d~~l~vDan~~~~~~~A~~~ 227 (404)
T 4e5t_A 149 YNDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVG-TKADLLFGTHGQFTVSGAKRL 227 (404)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHG-GGSEEEECCCSCBCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcC-CCCeEEEeCCCCcCHHHHHHH
Confidence 35789999999999999999999843111000 0111122335555555666665422 2689999954 44444332
Q ss_pred ---HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 306 ---VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 306 ---L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
|+ .|..+|-.-......+.+..+.+..++|+++
T Consensus 228 ~~~l~~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~ 264 (404)
T 4e5t_A 228 ARRLEAYDPLWFEEPIPPEKPEDMAEVARYTSIPVAT 264 (404)
T ss_dssp HHHHGGGCCSEEECCSCTTCHHHHHHHHHHCSSCEEE
T ss_pred HHHHhhcCCcEEECCCCcccHHHHHHHHhhCCCCEEe
Confidence 32 3899998654322125677888888899886
No 226
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=79.14 E-value=5.3 Score=39.52 Aligned_cols=87 Identities=13% Similarity=0.059 Sum_probs=50.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCC-CCCC---------CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE--eCCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQS-TRPM---------ATKISAEKELERLIPVLEAVLTMPEMEGKLVSV--DTFY 298 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eS-trP~---------a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI--DT~~ 298 (480)
.+.+++.+.|+.+.+.|||.|++..-. .+.. ....+....+..-...++.+++... .++||.. +-.+
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~-~~ipVi~~GGI~~ 300 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELN-GRLPIIGVGGIDS 300 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHT-TSSCEEEESSCCS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhC-CCCCEEEECCCCC
Confidence 567788999999999999999986421 1110 0001110011112233444443210 1466655 5678
Q ss_pred HHHHHHHHHcCCCEEecCCC
Q 038230 299 SKVASEAVGKGAHIVNDVSA 318 (480)
Q Consensus 299 ~~v~~aaL~~G~~iINdVsg 318 (480)
++.++++++.||+.|---++
T Consensus 301 ~~da~~~l~~GAd~V~igr~ 320 (336)
T 1f76_A 301 VIAAREKIAAGASLVQIYSG 320 (336)
T ss_dssp HHHHHHHHHHTCSEEEESHH
T ss_pred HHHHHHHHHCCCCEEEeeHH
Confidence 89999999889988864433
No 227
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=78.93 E-value=31 Score=33.33 Aligned_cols=90 Identities=17% Similarity=0.122 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eC-CCHHHHHHHHHcCCCE
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DT-FYSKVASEAVGKGAHI 312 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT-~~~~v~~aaL~~G~~i 312 (480)
+..+.|+.+.+.||+.|-|..+ +++ -.-..+ .++.+++. .++||-. |- .++..+++|.++|+|.
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd---~~~----f~Gs~~----~l~~ir~~---v~lPvl~kdfiid~~qv~~A~~~GAD~ 138 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTE---QRR----FQGSLD----DLDAVRAS---VSIPVLRKDFVVQPYQIHEARAHGADM 138 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECC---GGG----HHHHHH----HHHHHHHH---CSSCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHcCCCEEEEecC---hhh----cCCCHH----HHHHHHHh---CCCCEEECccccCHHHHHHHHHcCCCE
Confidence 4567899999999999999732 221 011122 23444443 3566543 43 3455689999999998
Q ss_pred EecCCCCCCC---chHHHHHHhcCCCEEE
Q 038230 313 VNDVSAGQLD---PDMYKVVAGLKVPYVA 338 (480)
Q Consensus 313 INdVsg~~~d---~~m~~l~~~~~~~vVl 338 (480)
|--+.+...+ .++++.++++|..+++
T Consensus 139 VlLi~a~l~~~~l~~l~~~a~~lGl~~lv 167 (272)
T 3qja_A 139 LLLIVAALEQSVLVSMLDRTESLGMTALV 167 (272)
T ss_dssp EEEEGGGSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEecccCCHHHHHHHHHHHHHCCCcEEE
Confidence 7643221112 4567888889987665
No 228
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=78.90 E-value=13 Score=38.13 Aligned_cols=107 Identities=15% Similarity=0.138 Sum_probs=71.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEe--CCCCC-----------CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDI--GAQST-----------RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDI--G~eSt-----------rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~ 297 (480)
.++++..+.|++++++|-..|-+ |..+. .|+ ...+.++++++....++++++... .+++|.+|..
T Consensus 153 ~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~e~v~avR~avG-~d~~L~vDaN 230 (422)
T 3tji_A 153 ETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPG-AWFDQQEYMSNTVEMFHALREKYG-WKLHILHDVH 230 (422)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSS-EECCHHHHHHHHHHHHHHHHHHHC-SSSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccc-ccccchhHHHHHHHHHHHHHHHcC-CCCEEEEECC
Confidence 46899999999999999998775 53211 122 234556667777777888887532 3789999964
Q ss_pred ---CHHHHHHH---HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 298 ---YSKVASEA---VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 298 ---~~~v~~aa---L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
+++.+.+. |+ .|..+|-.-......+.+..+.+..++|+++-
T Consensus 231 ~~~~~~~A~~~~~~Le~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~d 279 (422)
T 3tji_A 231 ERLFPQQAVQLAKQLEPFQPYFIEDILPPQQSAWLEQVRQQSCVPLALG 279 (422)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEECCSCGGGGGGHHHHHHHCCCCEEEC
T ss_pred CCCCHHHHHHHHHHHHhhCCCeEECCCChhhHHHHHHHHhhCCCCEEEe
Confidence 55544433 33 38899976543221256788888889998873
No 229
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=78.70 E-value=20 Score=34.74 Aligned_cols=111 Identities=18% Similarity=0.261 Sum_probs=69.3
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY 298 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~ 298 (480)
+|| |-| | -.|.+...++++.++++|+|-|-++| ||.-+. ..|. +|..++...+ .+.. .++.+.+=+.+
T Consensus 8 vTP--f~d-g-~iD~~~l~~lv~~li~~Gv~gl~v~G-ttGE~~-~Ls~-~Er~~v~~~~---~~~~--~gvi~Gvg~~~ 75 (286)
T 2r91_A 8 ITT--FRG-G-RLDPELFANHVKNITSKGVDVVFVAG-TTGLGP-ALSL-QEKMELTDAA---TSAA--RRVIVQVASLN 75 (286)
T ss_dssp CCC--EET-T-EECHHHHHHHHHHHHHTTCCEEEETS-TTTTGG-GSCH-HHHHHHHHHH---HHHC--SSEEEECCCSS
T ss_pred ecC--cCC-C-ccCHHHHHHHHHHHHHCCCCEEEECc-cccChh-hCCH-HHHHHHHHHH---HHHh--CCEEEeeCCCC
Confidence 688 663 3 36899999999999999999999987 444332 3444 5666655444 3321 13556665545
Q ss_pred HH-H---HHHHHHcCCCEEecCCCCCC----CchHH----HHHHhcCCCEEEEcC
Q 038230 299 SK-V---ASEAVGKGAHIVNDVSAGQL----DPDMY----KVVAGLKVPYVAMHM 341 (480)
Q Consensus 299 ~~-v---~~aaL~~G~~iINdVsg~~~----d~~m~----~l~~~~~~~vVlmh~ 341 (480)
.+ + ++.|-+.|+|-+--+...-. +++++ .++...+.|+++-+.
T Consensus 76 t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~ 130 (286)
T 2r91_A 76 ADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNY 130 (286)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 33 3 33445569997776654211 23333 455567899998664
No 230
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=78.61 E-value=11 Score=38.05 Aligned_cols=79 Identities=14% Similarity=0.142 Sum_probs=51.7
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCC--CCCCCEEEecCC------CCcc
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSG--IPAWRIIIDPGL------GFSK 394 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~G--i~~~~IilDPgi------Gf~k 394 (480)
.+.++++++.|+++|++|....+.... ....+++..+.+.+.|.+..+.|.+.| | +|.+-|.- .+..
T Consensus 119 ~~~i~~A~~LGa~~vvv~~G~~g~~~~--~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v---~l~lE~~~~e~~~~~~~~ 193 (394)
T 1xla_A 119 LHNIDLAAEMGAETFVMWGGREGSEYD--GSKDLAAALDRMREGVDTAAGYIKDKGYNL---RIALEPKPNEPRGDIFLP 193 (394)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCEESSG--GGCCHHHHHHHHHHHHHHHHHHHHHHTCCC---EEEECCCSSSSSSEESSC
T ss_pred HHHHHHHHHhCCCEEEECCCCCccccc--cccCHHHHHHHHHHHHHHHHHHHHhcCCCe---EEEEecCCCCCCccccCC
Confidence 357889999999999988631110000 001224455667788888899999999 8 48888752 2345
Q ss_pred ChhHHHHHHHhc
Q 038230 395 KAEHNLDILLGL 406 (480)
Q Consensus 395 ~~~~~~~~lr~l 406 (480)
+..+.+++++.+
T Consensus 194 t~~~~~~li~~v 205 (394)
T 1xla_A 194 TVGHGLAFIEQL 205 (394)
T ss_dssp SHHHHHHHHTTC
T ss_pred CHHHHHHHHHHh
Confidence 666767777654
No 231
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=78.41 E-value=60 Score=32.75 Aligned_cols=108 Identities=13% Similarity=0.106 Sum_probs=66.5
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCC-CCCCCCC---C--------CCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQ-STRPMAT---K--------ISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~e-StrP~a~---~--------v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~ 297 (480)
..++++..+.|++++++|-+.+.|-.. .+..|.. + ..+...++.....|+++++... .+++|.||..
T Consensus 148 ~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G-~d~~l~vDan 226 (410)
T 2gl5_A 148 LVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMG-DDADIIVEIH 226 (410)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHC-SSSEEEEECT
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcC-CCCEEEEECC
Confidence 458899999999999999999998631 0111110 0 0112334445556666666421 3789999953
Q ss_pred ---CHHHHHHHHH----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 298 ---YSKVASEAVG----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 298 ---~~~v~~aaL~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+++.+.+.++ +|.++|-+-.....-+.+..+.+..++|++.
T Consensus 227 ~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~ 274 (410)
T 2gl5_A 227 SLLGTNSAIQFAKAIEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIAT 274 (410)
T ss_dssp TCSCHHHHHHHHHHHGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEe
Confidence 4544433332 3888887654322125677777778888887
No 232
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=78.39 E-value=15 Score=36.68 Aligned_cols=147 Identities=14% Similarity=0.083 Sum_probs=79.7
Q ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHH----HHHHHH-cCC--cCCCCeEEE-eCCCHHHHHHHHH
Q 038230 236 AVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIP----VLEAVL-TMP--EMEGKLVSV-DTFYSKVASEAVG 307 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~----vi~~l~-~~~--~~~~~pISI-DT~~~~v~~aaL~ 307 (480)
.++.++.|+++|||+|=+.- |. +..+|++.=.+.+.| +++.++ +.. ...++|+.+ ..-....++.-.+
T Consensus 199 ~~~~~~~~i~aGad~i~i~D-~~---~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~~~~l~~l~~ 274 (367)
T 1r3s_A 199 LVPYLVGQVVAGAQALQLFE-SH---AGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQ 274 (367)
T ss_dssp HHHHHHHHHHTTCSEEEEEE-TT---GGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTCGGGHHHHTT
T ss_pred HHHHHHHHHHhCCCEEEEec-Cc---cccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCcHHHHHHHHh
Confidence 45678899999999998763 32 246787654444444 444444 210 000244433 2222446666667
Q ss_pred cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEe
Q 038230 308 KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIID 387 (480)
Q Consensus 308 ~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilD 387 (480)
.|++++|--+ .-.+.++.+.+|-.++++-.- .|.... .+ .+++.+..++.++.+ |- ...|+.
T Consensus 275 ~g~d~i~~d~----~~dl~~a~~~~g~~~~l~Gnl-dp~~L~----gt----~e~i~~~v~~~l~~~---g~--~g~I~~ 336 (367)
T 1r3s_A 275 AGYEVVGLDW----TVAPKKARECVGKTVTLQGNL-DPCALY----AS----EEEIGQLVKQMLDDF---GP--HRYIAN 336 (367)
T ss_dssp SSCSEEECCT----TSCHHHHHHHHCSSSEEEEEE-CGGGGG----SC----HHHHHHHHHHHHHHH---CS--SSEEEE
T ss_pred cCCCEEEeCC----CCCHHHHHHHcCCCeEEEeCC-ChHHhc----CC----HHHHHHHHHHHHHHh---CC--CCeeec
Confidence 7999997332 234566666677666665432 231111 11 233444444555543 31 378999
Q ss_pred cCCCCc-cChhHHHHHHH
Q 038230 388 PGLGFS-KKAEHNLDILL 404 (480)
Q Consensus 388 PgiGf~-k~~~~~~~~lr 404 (480)
||.|.. .+..+|+..+-
T Consensus 337 ~ghgi~~~~p~env~a~v 354 (367)
T 1r3s_A 337 LGHGLYPDMDPEHVGAFV 354 (367)
T ss_dssp ESSCCCTTCCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHH
Confidence 998863 44556655543
No 233
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=78.19 E-value=30 Score=34.65 Aligned_cols=104 Identities=13% Similarity=0.057 Sum_probs=64.0
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAV 306 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL 306 (480)
..++++..+.|++++++|-+.|.|-.....-+... +.+.+.++ ++++++... .+++|.||.. +++.+.+.+
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~-~~~~~~e~----v~avr~a~g-~d~~l~vDan~~~~~~~a~~~~ 220 (382)
T 1rvk_A 147 LATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAP-DVKMDLKA----CAAVREAVG-PDIRLMIDAFHWYSRTDALALG 220 (382)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCC-CHHHHHHH----HHHHHHHHC-TTSEEEEECCTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCcCcccccc-chHHHHHH----HHHHHHHhC-CCCeEEEECCCCCCHHHHHHHH
Confidence 35789999999999999999999854211001111 33444554 445554311 3789999953 454443333
Q ss_pred H----cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 307 G----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 307 ~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
+ .|.++|-+--.....+.+..+.+..++|++.-
T Consensus 221 ~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~d 257 (382)
T 1rvk_A 221 RGLEKLGFDWIEEPMDEQSLSSYKWLSDNLDIPVVGP 257 (382)
T ss_dssp HHHHTTTCSEEECCSCTTCHHHHHHHHHHCSSCEEEC
T ss_pred HHHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEe
Confidence 2 48999976543221256777777888998873
No 234
>1of8_A Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; beta-alpha-barrel, lyase, synthase, synthetase; HET: PEP G3P; 1.5A {Saccharomyces cerevisiae} SCOP: c.1.10.4 PDB: 1oab_A* 1of6_A* 1hfb_A* 1ofa_A* 1ofb_A 1ofo_A 1ofp_A 1ofq_A 1ofr_A* 1og0_A*
Probab=78.19 E-value=28 Score=35.37 Aligned_cols=100 Identities=13% Similarity=0.161 Sum_probs=69.3
Q ss_pred CCHHHHHHHHHHHHHcCCC-------EEEeCCCCCCCCC------------CCCCHHHHHHHHHHHHHHHHcCCcCCCCe
Q 038230 231 QSVEAAVSQVRLMISEGAD-------MIDIGAQSTRPMA------------TKISAEKELERLIPVLEAVLTMPEMEGKL 291 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAd-------iIDIG~eStrP~a------------~~v~~~eE~~rl~~vi~~l~~~~~~~~~p 291 (480)
-|.+.+++.|+++.+.|+. |.-.+++-.|... ..-.-++=++.+..++..+.+. ++|
T Consensus 79 ed~e~aleyA~~Lk~~~~~~~d~l~iVmR~yfeKPRTs~GwKGli~dP~ld~Sf~g~~GL~i~r~ll~~v~e~----GlP 154 (370)
T 1of8_A 79 HDLEAAQEYALRLKKLSDELKGDLSIIMRAYLEKPRTTVGWKGLINDPDVNNTFNINKGLQSARQLFVNLTNI----GLP 154 (370)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCCSSSSCCCTTTCTTSSSCCCHHHHHHHHHHHHHHHHTT----TCC
T ss_pred CCHHHHHHHHHHHHHHHHhhccCeEEEEEeccccccCCccccccccCCCcCCCcCHHHHHHHHHHHHHHHHHc----CCc
Confidence 5789999999999999999 8888887544321 1112255577777777777754 999
Q ss_pred EEEeCCCHHHHHHHHHcCCCEEe--cCCCCCCC-chHHHHHHhcCCCEEE
Q 038230 292 VSVDTFYSKVASEAVGKGAHIVN--DVSAGQLD-PDMYKVVAGLKVPYVA 338 (480)
Q Consensus 292 ISIDT~~~~v~~aaL~~G~~iIN--dVsg~~~d-~~m~~l~~~~~~~vVl 338 (480)
+.-|-.+|...+.. +|+|- -|-+.+-. ....+++...++||-+
T Consensus 155 vaTEvld~~~~qyv----~Dllsw~aIGARt~esq~hre~Asgl~~PVg~ 200 (370)
T 1of8_A 155 IGSEMLDTISPQYL----ADLVSFGAIGARTTESQLHRELASGLSFPVGF 200 (370)
T ss_dssp EEEECCSSSTHHHH----GGGCSEEEECTTTTTCHHHHHHHHTCSSCEEE
T ss_pred eEEeecCcccHHHH----HHHHhhccccCcccccHHHHHHHhcCCCeEEE
Confidence 99887777776655 56552 34443322 4566777788888876
No 235
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=78.01 E-value=29 Score=32.39 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=37.0
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC----CccChhH
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG----FSKKAEH 398 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG----f~k~~~~ 398 (480)
.+.+++|++.|+++|.+|....+.. ..++..+...+.+.+..+. ..|+ +|.+-|.-+ ++.+..+
T Consensus 92 ~~~i~~A~~lG~~~v~~~~g~~~~~-------~~~~~~~~~~~~l~~l~~~--~~gv---~l~lEn~~~~~~~~~~~~~~ 159 (287)
T 2x7v_A 92 KKEVEICRKLGIRYLNIHPGSHLGT-------GEEEGIDRIVRGLNEVLNN--TEGV---VILLENVSQKGGNIGYKLEQ 159 (287)
T ss_dssp HHHHHHHHHHTCCEEEECCEECTTS-------CHHHHHHHHHHHHHHHHTT--CCSC---EEEEECCCCCTTEECSSHHH
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCC-------CHHHHHHHHHHHHHHHHcc--cCCC---EEEEeCCCCCCCccCCCHHH
Confidence 3567778888888887775322211 0122222333333333322 2577 477777544 2345566
Q ss_pred HHHHHHhc
Q 038230 399 NLDILLGL 406 (480)
Q Consensus 399 ~~~~lr~l 406 (480)
..++++.+
T Consensus 160 ~~~l~~~~ 167 (287)
T 2x7v_A 160 LKKIRDLV 167 (287)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 56666654
No 236
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=77.96 E-value=8.2 Score=38.83 Aligned_cols=67 Identities=22% Similarity=0.285 Sum_probs=44.6
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCC---------CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHH
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMAT---------KISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAV 306 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~---------~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL 306 (480)
+.|++.++.|||+|+++... ++. .++. +.-+..+.+..... ++||-.|. .++.-+.+||
T Consensus 173 e~A~~a~~aGaD~I~v~~g~---G~~~~~r~~~g~~~p~---~~~l~~v~~~~~~~----~ipvIa~GGI~~g~di~kAl 242 (351)
T 2c6q_A 173 EMVEELILSGADIIKVGIGP---GSVCTTRKKTGVGYPQ---LSAVMECADAAHGL----KGHIISDGGCSCPGDVAKAF 242 (351)
T ss_dssp HHHHHHHHTTCSEEEECSSC---STTBCHHHHHCBCCCH---HHHHHHHHHHHHHT----TCEEEEESCCCSHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEECCCC---CcCcCccccCCCCccH---HHHHHHHHHHHhhc----CCcEEEeCCCCCHHHHHHHH
Confidence 45778899999999997432 210 1111 23333344443332 68888864 8899999999
Q ss_pred HcCCCEEe
Q 038230 307 GKGAHIVN 314 (480)
Q Consensus 307 ~~G~~iIN 314 (480)
..||+.+-
T Consensus 243 alGA~~V~ 250 (351)
T 2c6q_A 243 GAGADFVM 250 (351)
T ss_dssp HTTCSEEE
T ss_pred HcCCCcee
Confidence 99999885
No 237
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=77.82 E-value=7.3 Score=36.10 Aligned_cols=75 Identities=11% Similarity=0.028 Sum_probs=51.3
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCC-----C-CccCh
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGL-----G-FSKKA 396 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgi-----G-f~k~~ 396 (480)
.+.++++++.|+++|.+|....|.. ...++..+...+.+.+..+.|.++|| +|.+-|.- + +..+.
T Consensus 88 ~~~i~~a~~lG~~~v~~~~g~~~~~------~~~~~~~~~~~~~l~~l~~~a~~~gv---~l~~E~~~~~~~~~~~~~~~ 158 (260)
T 1k77_A 88 DLALEYALALNCEQVHVMAGVVPAG------EDAERYRAVFIDNIRYAADRFAPHGK---RILVEALSPGVKPHYLFSSQ 158 (260)
T ss_dssp HHHHHHHHHTTCSEEECCCCBCCTT------SCHHHHHHHHHHHHHHHHHHHGGGTC---EEEECCCCTTTSTTBSCCSH
T ss_pred HHHHHHHHHcCCCEEEECcCCCCCC------CCHHHHHHHHHHHHHHHHHHHHHcCC---EEEEEeCCccCCCcCccCCH
Confidence 3578889999999998876433321 11234455667788888888999999 48998852 2 34566
Q ss_pred hHHHHHHHhc
Q 038230 397 EHNLDILLGL 406 (480)
Q Consensus 397 ~~~~~~lr~l 406 (480)
.+..++++.+
T Consensus 159 ~~~~~l~~~~ 168 (260)
T 1k77_A 159 YQALAIVEEV 168 (260)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6767777765
No 238
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=77.49 E-value=7.5 Score=35.71 Aligned_cols=66 Identities=18% Similarity=0.232 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCCEEEeCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEec
Q 038230 238 SQVRLMISEGADMIDIGAQST-RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVND 315 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eSt-rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINd 315 (480)
++++...+.|||.+-++.+.. +|. .+ +. .+++.+++.. .+.++.++...++.++++.+.|+++|.-
T Consensus 79 ~~i~~~~~~Gad~v~l~~~~~~~p~---~~----~~---~~i~~~~~~~--~~~~v~~~~~t~~e~~~~~~~G~d~i~~ 145 (223)
T 1y0e_A 79 KEVDELIESQCEVIALDATLQQRPK---ET----LD---ELVSYIRTHA--PNVEIMADIATVEEAKNAARLGFDYIGT 145 (223)
T ss_dssp HHHHHHHHHTCSEEEEECSCSCCSS---SC----HH---HHHHHHHHHC--TTSEEEEECSSHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHhCCCCEEEEeeecccCcc---cC----HH---HHHHHHHHhC--CCceEEecCCCHHHHHHHHHcCCCEEEe
Confidence 456677899999999997643 231 11 22 3445555532 2778899999999999999999999863
No 239
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=77.45 E-value=26 Score=36.34 Aligned_cols=79 Identities=15% Similarity=0.087 Sum_probs=52.2
Q ss_pred hHHHHHHhcCCCEEEEcCCCCCC-ccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC------CccCh
Q 038230 324 DMYKVVAGLKVPYVAMHMRGDPS-TMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG------FSKKA 396 (480)
Q Consensus 324 ~m~~l~~~~~~~vVlmh~~g~p~-~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG------f~k~~ 396 (480)
+.++++++.|++.+.+|...... ... +..+..-.+.+.+.|.+..+.|.+.|+. -+|.|-|--+ |..+.
T Consensus 171 ~aId~A~~LGa~~vv~~~G~~G~~~~~---~~~~~~~~~~~~e~L~~~~~~A~~~Gv~-v~l~IEp~p~~~~~~~~~~t~ 246 (438)
T 1a0c_A 171 KALEITKELGGENYVFWGGREGYETLL---NTDMEFELDNFARFLHMAVDYAKEIGFE-GQFLIEPKPKEPTKHQYDFDV 246 (438)
T ss_dssp HHHHHHHHTTCSEEEECCTTSEESCGG---GCCHHHHHHHHHHHHHHHHHHHHHTTCC-SEEEECCCSCSSSSEESSCSH
T ss_pred HHHHHHHHcCCCEEEEccCCCccccCC---CCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEeeCCCCCCCCcccCCH
Confidence 56888999999999988632100 000 0112233456678888888999999862 1589998421 56677
Q ss_pred hHHHHHHHhc
Q 038230 397 EHNLDILLGL 406 (480)
Q Consensus 397 ~~~~~~lr~l 406 (480)
.+.+++++.+
T Consensus 247 ~~al~li~~v 256 (438)
T 1a0c_A 247 ANVLAFLRKY 256 (438)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 8888888876
No 240
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=77.42 E-value=24 Score=39.29 Aligned_cols=156 Identities=12% Similarity=0.145 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE--e-CCCHHHHHHHHHcC
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMA--TKISAEKELERLIPVLEAVLTMPEMEGKLVSV--D-TFYSKVASEAVGKG 309 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a--~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI--D-T~~~~v~~aaL~~G 309 (480)
...+.++.+.++|+++|=|--.+-+.+. ..++.++..++.+++++.+.+... .+..|.+ . .....++..-.+.+
T Consensus 586 a~~~ev~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~~~~~~~~v~-~~~~i~~HiC~G~~~~i~~~l~~~~ 664 (765)
T 1u1j_A 586 AIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQ-DSTQIHTHMCYSHFNDIIHSIIDMD 664 (765)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTTSSTTCCSSGGGHHHHHHHHHHHHHHHHTTSC-SSSEEEEECSCSCCTTTHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCEEEECCCcccccccccCCCHHHHHHHHHHHHHHHHhcCC-CCCeEEEEeccCCcHHHHHHHHhCC
Confidence 3345578888999999888644333221 224556667788888887775432 2445553 4 22224455556679
Q ss_pred CCEEecCCCCCCCchHHHHHHh-cCCC-EEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEe
Q 038230 310 AHIVNDVSAGQLDPDMYKVVAG-LKVP-YVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIID 387 (480)
Q Consensus 310 ~~iINdVsg~~~d~~m~~l~~~-~~~~-vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilD 387 (480)
+|.|. +-....+-+.+..+.+ ++.+ .|++-.- .+.+..- ++ . +.+.++++++.+. ++.+++++-
T Consensus 665 ~D~is-lE~~rs~~e~L~~~~~~~~~~~~v~lGvv-d~~s~~v------e~-~----eev~~ri~~a~~~-v~~e~l~ls 730 (765)
T 1u1j_A 665 ADVIT-IENSRSDEKLLSVFREGVKYGAGIGPGVY-DIHSPRI------PS-S----EEIADRVNKMLAV-LEQNILWVN 730 (765)
T ss_dssp CSEEE-CCBSSSCTTGGGGGTTTTCCCSEECCBSS-CTTSSSC------CT-H----HHHHHHHHHHHHS-SCSTTBCBB
T ss_pred CCEEE-EeCCCCCHHHHHHHHhhccCCCeEEEeec-CCccCCC------CC-H----HHHHHHHHHHHHh-cCcccEEEe
Confidence 98875 4322212233333333 2212 3322110 1111110 11 1 4455777777666 556799999
Q ss_pred cCCCCc-cChhHHHHHHHh
Q 038230 388 PGLGFS-KKAEHNLDILLG 405 (480)
Q Consensus 388 PgiGf~-k~~~~~~~~lr~ 405 (480)
|.-||+ .+..+.+..|+.
T Consensus 731 PdCGl~t~t~~e~~~kL~~ 749 (765)
T 1u1j_A 731 PDCGLKTRKYTEVKPALKN 749 (765)
T ss_dssp CSSCSSSSCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHH
Confidence 999996 455543444443
No 241
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=77.28 E-value=26 Score=35.60 Aligned_cols=103 Identities=17% Similarity=0.136 Sum_probs=64.9
Q ss_pred cCCHHHHHHHH-HHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHH
Q 038230 230 FQSVEAAVSQV-RLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEA 305 (480)
Q Consensus 230 ~~~~e~a~~~A-~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aa 305 (480)
..++++..+.| ++++++|-..+-+-.....+. ..-+.+++++++. ++++... .+++|.||.. +++.+.+.
T Consensus 137 ~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~-~~~~~~~d~~~v~----avR~a~g-~~~~l~vDaN~~~~~~~A~~~ 210 (393)
T 4dwd_A 137 ARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR-CDVDIPGDIAKAR----AVRELLG-PDAVIGFDANNGYSVGGAIRV 210 (393)
T ss_dssp SSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC-CSCCHHHHHHHHH----HHHHHHC-TTCCEEEECTTCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc-cccCHHHHHHHHH----HHHHHhC-CCCeEEEECCCCCCHHHHHHH
Confidence 35689999999 999999999988754221111 2224667777654 4444311 3789999954 44444332
Q ss_pred ---HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 306 ---VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 306 ---L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
|+ .|..+|-+--.....+.+..+.+..++|+++
T Consensus 211 ~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~ 247 (393)
T 4dwd_A 211 GRALEDLGYSWFEEPVQHYHVGAMGEVAQRLDITVSA 247 (393)
T ss_dssp HHHHHHTTCSEEECCSCTTCHHHHHHHHHHCSSEEEB
T ss_pred HHHHHhhCCCEEECCCCcccHHHHHHHHhhCCCCEEe
Confidence 32 4899997654322125677777788888775
No 242
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=77.21 E-value=50 Score=33.06 Aligned_cols=79 Identities=14% Similarity=0.146 Sum_probs=50.6
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHC--CCCCCCEEEecCCC------Ccc
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELS--GIPAWRIIIDPGLG------FSK 394 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~--Gi~~~~IilDPgiG------f~k 394 (480)
.+.++++++.|+++|.+|........ .....+....+...+.|.+..+.+.+. |+ ++.+-|--. +..
T Consensus 119 ~~~i~~A~~LGa~~vv~~~G~~g~~~--~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv---~l~lE~~~~~~~~~~~~~ 193 (393)
T 1xim_A 119 LRQMDLGAELGAKTLVLWGGREGAEY--DSAKDVSAALDRYREALNLLAQYSEDRGYGL---RFAIEPKPNEPRGDILLP 193 (393)
T ss_dssp HHHHHHHHHHTCCEEEEECTTSEESS--GGGCCHHHHHHHHHHHHHHHHHHHHHHTCCC---EEEEECCSSSSSSEESSC
T ss_pred HHHHHHHHHhCCCEEEECCCCCCCcC--CccCCHHHHHHHHHHHHHHHHHHHHhcCCCc---EEEEecCCCCCCCCCcCC
Confidence 46788999999999988763110000 000112344566778888888999887 88 599988531 345
Q ss_pred ChhHHHHHHHhc
Q 038230 395 KAEHNLDILLGL 406 (480)
Q Consensus 395 ~~~~~~~~lr~l 406 (480)
+..+.+++++.+
T Consensus 194 t~~~~~~ll~~v 205 (393)
T 1xim_A 194 TAGHAIAFVQEL 205 (393)
T ss_dssp SHHHHHHHHTTS
T ss_pred CHHHHHHHHHHh
Confidence 566667777654
No 243
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=77.10 E-value=55 Score=31.66 Aligned_cols=89 Identities=15% Similarity=0.031 Sum_probs=56.5
Q ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-e-CCCHHHHHHHHHcCCCEE
Q 038230 236 AVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-D-TFYSKVASEAVGKGAHIV 313 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-D-T~~~~v~~aaL~~G~~iI 313 (480)
..+.|+.+.+.||+.|-|-.+ |++-.-+. +.+ +.+++. +++||-. | ..++.-+.+|..+|||.|
T Consensus 81 p~~~A~~y~~~GA~~IsVltd---~~~f~Gs~-~~L-------~~ir~~---v~lPVl~Kdfi~d~~qi~ea~~~GAD~V 146 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTD---TPSFQGAP-EFL-------TAARQA---CSLPALRKDFLFDPYQVYEARSWGADCI 146 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECC---STTTCCCH-HHH-------HHHHHT---SSSCEEEESCCCSTHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHCCCCEEEEecc---ccccCCCH-HHH-------HHHHHh---cCCCEEECCccCCHHHHHHHHHcCCCEE
Confidence 567899999999999988633 32211122 222 334444 3677633 3 145557888999999987
Q ss_pred ecCCCCCCC---chHHHHHHhcCCCEEE
Q 038230 314 NDVSAGQLD---PDMYKVVAGLKVPYVA 338 (480)
Q Consensus 314 NdVsg~~~d---~~m~~l~~~~~~~vVl 338 (480)
--+.....+ .+++..++++|..+++
T Consensus 147 lLi~a~L~~~~l~~l~~~a~~lGl~~lv 174 (272)
T 3tsm_A 147 LIIMASVDDDLAKELEDTAFALGMDALI 174 (272)
T ss_dssp EEETTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEcccccCHHHHHHHHHHHHHcCCeEEE
Confidence 655543322 3577778899977665
No 244
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=77.07 E-value=14 Score=37.86 Aligned_cols=102 Identities=12% Similarity=0.045 Sum_probs=65.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHH---
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEA--- 305 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aa--- 305 (480)
++++..+.|++++++|-+.+.|-... .| .+....+++-...|+++++... .+++|.||.. +++.+.+.
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~-gp----~dg~~~~~~die~v~avReavG-~d~~L~vDaN~~~~~~~Ai~~~~~ 252 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGY-GP----KDGMPGMRENLKRVEAVREVIG-YDNDLMLECYMGWNLDYAKRMLPK 252 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCC-CG----GGHHHHHHHHHHHHHHHHHHHC-SSSEEEEECTTCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccc-Cc----ccccchHHHHHHHHHHHHHHcC-CCCeEEEECCCCCCHHHHHHHHHH
Confidence 78999999999999999999986421 11 1112234444445566665422 3789999954 45544333
Q ss_pred HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 306 VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 306 L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
|+ .|..+|-.-......+.+..+.+..++|++.-
T Consensus 253 Le~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~d 287 (412)
T 3stp_A 253 LAPYEPRWLEEPVIADDVAGYAELNAMNIVPISGG 287 (412)
T ss_dssp HGGGCCSEEECCSCTTCHHHHHHHHHTCSSCEEEC
T ss_pred HHhcCCCEEECCCCcccHHHHHHHHhCCCCCEEeC
Confidence 32 38999976543221256777878888998873
No 245
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=77.05 E-value=6 Score=40.20 Aligned_cols=74 Identities=20% Similarity=0.179 Sum_probs=45.9
Q ss_pred HHHHHHHcCCCEEEeCCCCCCCCCCCCCHH------HHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcCC
Q 038230 239 QVRLMISEGADMIDIGAQSTRPMATKISAE------KELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKGA 310 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eStrP~a~~v~~~------eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G~ 310 (480)
.|+++.++|||+|.+|.+ ||+...+.. ..+..+..+.+.... .++||--| -.+++-+.+||.+||
T Consensus 162 ~A~~a~~aGAD~I~vG~g---pGs~~~tr~~~g~g~p~~~~l~~v~~~~~~----~~iPVIA~GGI~~~~di~kala~GA 234 (366)
T 4fo4_A 162 GARALIEAGVSAVKVGIG---PGSICTTRIVTGVGVPQITAIADAAGVANE----YGIPVIADGGIRFSGDISKAIAAGA 234 (366)
T ss_dssp HHHHHHHHTCSEEEECSS---CSTTBCHHHHHCCCCCHHHHHHHHHHHHGG----GTCCEEEESCCCSHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEecC---CCCCCCcccccCcccchHHHHHHHHHHHhh----cCCeEEEeCCCCCHHHHHHHHHcCC
Confidence 567788999999999743 332211100 123333333333333 37888774 468899999999999
Q ss_pred CEEecCCCC
Q 038230 311 HIVNDVSAG 319 (480)
Q Consensus 311 ~iINdVsg~ 319 (480)
+.+-=-+.+
T Consensus 235 d~V~vGs~f 243 (366)
T 4fo4_A 235 SCVMVGSMF 243 (366)
T ss_dssp SEEEESTTT
T ss_pred CEEEEChHh
Confidence 988755543
No 246
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=76.86 E-value=44 Score=30.45 Aligned_cols=133 Identities=14% Similarity=0.184 Sum_probs=66.6
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCC
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVS 317 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVs 317 (480)
+.+++.++.|+++|-+-.. .++. +|.. ++++.+++.....+ .+.|+. -++.|++.|++.|- +.
T Consensus 33 ~~~~~~~~~G~~~v~lr~~-------~~~~-~~~~---~~~~~l~~~~~~~~-~l~v~~----~~~~a~~~gad~v~-l~ 95 (221)
T 1yad_A 33 ARIIITIQNEVDFIHIRER-------SKSA-ADIL---KLLDLIFEGGIDKR-KLVMNG----RVDIALFSTIHRVQ-LP 95 (221)
T ss_dssp HHHHHHHGGGCSEEEECCT-------TSCH-HHHH---HHHHHHHHTTCCGG-GEEEES----CHHHHHTTTCCEEE-EC
T ss_pred HHHHHHHHCCCCEEEEccC-------CCCH-HHHH---HHHHHHHHhcCcCC-eEEEeC----hHHHHHHcCCCEEE-eC
Confidence 4477788999999977421 1332 3333 34455554311012 577773 24678889999885 33
Q ss_pred CCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCc-cC-
Q 038230 318 AGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFS-KK- 395 (480)
Q Consensus 318 g~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~-k~- 395 (480)
+.....+.+.-... +..+.+ +- .| .+.+..+.+.|.+ -|.++|.++-. +.
T Consensus 96 ~~~~~~~~~~~~~~-~~~ig~--sv---~t--------------------~~~~~~a~~~gaD--~i~~~~~f~~~~~~g 147 (221)
T 1yad_A 96 SGSFSPKQIRARFP-HLHIGR--SV---HS--------------------LEEAVQAEKEDAD--YVLFGHVFETDCKKG 147 (221)
T ss_dssp TTSCCHHHHHHHCT-TCEEEE--EE---CS--------------------HHHHHHHHHTTCS--EEEEECCC-------
T ss_pred CCccCHHHHHHHCC-CCEEEE--Ec---CC--------------------HHHHHHHHhCCCC--EEEECCccccCCCCC
Confidence 32111222222211 332222 10 01 0123456678876 78899864321 11
Q ss_pred -hhHHHHHHHhc-ccCCCcEEE
Q 038230 396 -AEHNLDILLGL-AASHAPILI 415 (480)
Q Consensus 396 -~~~~~~~lr~l-~~~g~Pil~ 415 (480)
....++.++.+ +..++|++.
T Consensus 148 ~~~~~~~~l~~~~~~~~~pvia 169 (221)
T 1yad_A 148 LEGRGVSLLSDIKQRISIPVIA 169 (221)
T ss_dssp ---CHHHHHHHHHHHCCSCEEE
T ss_pred CCCCCHHHHHHHHHhCCCCEEE
Confidence 12356777776 345889764
No 247
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=76.71 E-value=32 Score=34.59 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=61.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL~ 307 (480)
.++++..+.|+++++.|.+.|.+.... +.++++++ ++++++... .+++|.||.. +++.+.+.++
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~iKiK~G~--------~~~~d~~~----v~avR~a~g-~~~~l~vDan~~~~~~~a~~~~~ 210 (378)
T 3eez_A 144 KSVEETRAVIDRYRQRGYVAHSVKIGG--------DVERDIAR----IRDVEDIRE-PGEIVLYDVNRGWTRQQALRVMR 210 (378)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCS--------CHHHHHHH----HHHHTTSCC-TTCEEEEECTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCEEEeccCC--------CHHHHHHH----HHHHHHHcC-CCceEEEECCCCCCHHHHHHHHH
Confidence 578999999999999999999987521 34555555 567777632 3789999964 5555444333
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.|. +|-+--. .-+.+..+.+..++|++.
T Consensus 211 ~l~~~~i-~iEqP~~--~~~~~~~l~~~~~iPIa~ 242 (378)
T 3eez_A 211 ATEDLHV-MFEQPGE--TLDDIAAIRPLHSAPVSV 242 (378)
T ss_dssp HTGGGTC-CEECCSS--SHHHHHHTGGGCCCCEEE
T ss_pred HhccCCe-EEecCCC--CHHHHHHHHhhCCCCEEE
Confidence 366 6754332 124566666677888876
No 248
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=76.45 E-value=7.9 Score=39.14 Aligned_cols=82 Identities=18% Similarity=0.056 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCC-------------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-----e
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQS-------------TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-----D 295 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eS-------------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-----D 295 (480)
++..+.|+...++|+|.|+|++.- .|...-.-|.+...+.+..+++++++... .+ ||+| |
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg-~~-pv~vris~~~ 238 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIG-AE-RVGVRLAPLT 238 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHC-GG-GEEEEECSSC
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcC-CC-cEEEEEcccc
Confidence 445566777789999999997621 12221223456667778888888887532 13 6666 3
Q ss_pred CC-------CH----HHHHHHHHcCCCEEecCC
Q 038230 296 TF-------YS----KVASEAVGKGAHIVNDVS 317 (480)
Q Consensus 296 T~-------~~----~v~~aaL~~G~~iINdVs 317 (480)
.+ .. ++++++-++|++.|.-..
T Consensus 239 ~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 271 (365)
T 2gou_A 239 TLNGTVDADPILTYTAAAALLNKHRIVYLHIAE 271 (365)
T ss_dssp CTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 22 12 224455556888887443
No 249
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=76.32 E-value=7.5 Score=36.70 Aligned_cols=87 Identities=16% Similarity=0.103 Sum_probs=57.8
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCC------eEEEeCCCHHHHHHHHHcCCC
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGK------LVSVDTFYSKVASEAVGKGAH 311 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~------pISIDT~~~~v~~aaL~~G~~ 311 (480)
+++++.+++||++|-- |+.. .| +++..++. ++ |+.=+-..|+.+.+|+++|++
T Consensus 76 ~~a~~ai~AGA~fivs------P~~~-----~e------vi~~~~~~----~v~~~~~~~~~PG~~TptE~~~A~~~Gad 134 (217)
T 3lab_A 76 DDFQKAIDAGAQFIVS------PGLT-----PE------LIEKAKQV----KLDGQWQGVFLPGVATASEVMIAAQAGIT 134 (217)
T ss_dssp HHHHHHHHHTCSEEEE------SSCC-----HH------HHHHHHHH----HHHCSCCCEEEEEECSHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCEEEe------CCCc-----HH------HHHHHHHc----CCCccCCCeEeCCCCCHHHHHHHHHcCCC
Confidence 4678889999999954 5432 22 23333443 67 888899999999999999999
Q ss_pred EEecCCCCCC-CchHHHHHHhcCCCEEEEcCCCCC
Q 038230 312 IVNDVSAGQL-DPDMYKVVAGLKVPYVAMHMRGDP 345 (480)
Q Consensus 312 iINdVsg~~~-d~~m~~l~~~~~~~vVlmh~~g~p 345 (480)
+|.-.-+... -+++++-++.-=-.+-+|...|+.
T Consensus 135 ~vK~FPa~~~gG~~~lkal~~p~p~i~~~ptGGI~ 169 (217)
T 3lab_A 135 QLKCFPASAIGGAKLLKAWSGPFPDIQFCPTGGIS 169 (217)
T ss_dssp EEEETTTTTTTHHHHHHHHHTTCTTCEEEEBSSCC
T ss_pred EEEECccccccCHHHHHHHHhhhcCceEEEeCCCC
Confidence 9985544321 145555544422235567787753
No 250
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=76.29 E-value=4.7 Score=40.90 Aligned_cols=96 Identities=13% Similarity=0.006 Sum_probs=60.8
Q ss_pred ecCCCCCCCCCccC-CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCe-EEEe
Q 038230 218 NLTPDSFSDGGKFQ-SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKL-VSVD 295 (480)
Q Consensus 218 N~tpDSFsdgg~~~-~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~p-ISID 295 (480)
=++|+.+.+|.... +.+++++.|+.+.+.|+|+|++-...+.+ +.++.+++.. ++| |..-
T Consensus 233 Rls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~---------------~~~~~ik~~~---~iPvi~~G 294 (361)
T 3gka_A 233 HLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGD---------------AIGQQLKAAF---GGPFIVNE 294 (361)
T ss_dssp EECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTT---------------CCHHHHHHHH---CSCEEEES
T ss_pred ecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCH---------------HHHHHHHHHc---CCCEEEeC
Confidence 45676665543222 36778999999999999999996532111 1223333321 334 3444
Q ss_pred CCCHHHHHHHHHcC-CCEEecCCCCCCCchHHHHHHh
Q 038230 296 TFYSKVASEAVGKG-AHIVNDVSAGQLDPDMYKVVAG 331 (480)
Q Consensus 296 T~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l~~~ 331 (480)
-.+++.++++|+.| +|+|-=-.+.-.+|.+..-+++
T Consensus 295 git~e~a~~~l~~G~aD~V~iGR~~ladPdl~~k~~~ 331 (361)
T 3gka_A 295 NFTLDSAQAALDAGQADAVAWGKLFIANPDLPRRFKL 331 (361)
T ss_dssp SCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCCHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHh
Confidence 45899999999997 8998644443346777666655
No 251
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=76.17 E-value=48 Score=30.51 Aligned_cols=23 Identities=17% Similarity=0.215 Sum_probs=16.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQ 256 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~e 256 (480)
.+.+++++.+. +.|.+.|++...
T Consensus 19 ~~~~~~l~~~~---~~G~~~vEl~~~ 41 (272)
T 2q02_A 19 LSIEAFFRLVK---RLEFNKVELRND 41 (272)
T ss_dssp SCHHHHHHHHH---HTTCCEEEEETT
T ss_pred CCHHHHHHHHH---HcCCCEEEeecc
Confidence 46666665554 679999999753
No 252
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=76.15 E-value=3.6 Score=40.24 Aligned_cols=60 Identities=20% Similarity=0.265 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHHHHcCCC---EEEeCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHcCCcCCCCeEEEe
Q 038230 231 QSVEAAVSQVRLMISEGAD---MIDIGAQSTRPMATKIS-AEKELERLIPVLEAVLTMPEMEGKLVSVD 295 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAd---iIDIG~eStrP~a~~v~-~~eE~~rl~~vi~~l~~~~~~~~~pISID 295 (480)
.+.++..+.|+.+.+.|+| +|+||..| |....-+ -....+.+..+++.+++. .++||.+=
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~--P~~~g~~~~g~~~~~~~~ii~~vr~~---~~~Pv~vK 166 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSC--PNVPGKPQVAYDFEAMRTYLQQVSLA---YGLPFGVK 166 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCC--CCSTTCCCGGGSHHHHHHHHHHHHHH---HCSCEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCC--CCCCCchhhcCCHHHHHHHHHHHHHh---cCCCEEEE
Confidence 3678889999999999999 99999754 3221100 011233456777777765 25677653
No 253
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=76.13 E-value=11 Score=37.47 Aligned_cols=68 Identities=13% Similarity=0.120 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHcC--CCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe-CCCHHHHHHHHHcCCC
Q 038230 235 AAVSQVRLMISEG--ADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD-TFYSKVASEAVGKGAH 311 (480)
Q Consensus 235 ~a~~~A~~~v~~G--AdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID-T~~~~v~~aaL~~G~~ 311 (480)
+..+.++.+.+.| +++|+++... + +.. .....|+.+++.. .+.|+... -..++.++.|.++|+|
T Consensus 106 ~~~~~a~~~~~~g~~~~~i~i~~~~---G----~~~----~~~~~i~~lr~~~--~~~~vi~G~v~s~e~A~~a~~aGad 172 (336)
T 1ypf_A 106 DEYEFVQQLAAEHLTPEYITIDIAH---G----HSN----AVINMIQHIKKHL--PESFVIAGNVGTPEAVRELENAGAD 172 (336)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEECSS---C----CSH----HHHHHHHHHHHHC--TTSEEEEEEECSHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCC---C----CcH----HHHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCC
Confidence 4567899999999 9999987521 1 111 2334456666542 14566655 4679999999999999
Q ss_pred EEec
Q 038230 312 IVND 315 (480)
Q Consensus 312 iINd 315 (480)
.|--
T Consensus 173 ~Ivv 176 (336)
T 1ypf_A 173 ATKV 176 (336)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8753
No 254
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=76.06 E-value=32 Score=33.35 Aligned_cols=90 Identities=14% Similarity=0.110 Sum_probs=56.4
Q ss_pred HHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCC
Q 038230 239 QVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSA 318 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg 318 (480)
++.+..+.|||.|=+++. . ++ .++++.+ ++..++. ++-+-++..+.+.++.|++.|+++|- ++.
T Consensus 134 qi~ea~~~GAD~VlLi~a-~------L~-~~~l~~l---~~~a~~l----Gl~~lvevh~~eEl~~A~~~ga~iIG-inn 197 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMA-S------VD-DDLAKEL---EDTAFAL----GMDALIEVHDEAEMERALKLSSRLLG-VNN 197 (272)
T ss_dssp HHHHHHHTTCSEEEEETT-T------SC-HHHHHHH---HHHHHHT----TCEEEEEECSHHHHHHHTTSCCSEEE-EEC
T ss_pred HHHHHHHcCCCEEEEccc-c------cC-HHHHHHH---HHHHHHc----CCeEEEEeCCHHHHHHHHhcCCCEEE-ECC
Confidence 355667899999999863 1 22 3455554 4444554 77788899999999999999999883 332
Q ss_pred C---CC--C-chHHHHHHhcCCCEEEEcCCCC
Q 038230 319 G---QL--D-PDMYKVVAGLKVPYVAMHMRGD 344 (480)
Q Consensus 319 ~---~~--d-~~m~~l~~~~~~~vVlmh~~g~ 344 (480)
. +. | +...+++......++++...|+
T Consensus 198 r~l~t~~~dl~~~~~L~~~ip~~~~vIaesGI 229 (272)
T 3tsm_A 198 RNLRSFEVNLAVSERLAKMAPSDRLLVGESGI 229 (272)
T ss_dssp BCTTTCCBCTHHHHHHHHHSCTTSEEEEESSC
T ss_pred CCCccCCCChHHHHHHHHhCCCCCcEEEECCC
Confidence 1 11 2 3355666655323333334444
No 255
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=75.82 E-value=41 Score=33.62 Aligned_cols=79 Identities=15% Similarity=0.116 Sum_probs=50.7
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHC--CCCCCCEEEecCC-----C-Ccc
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELS--GIPAWRIIIDPGL-----G-FSK 394 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~--Gi~~~~IilDPgi-----G-f~k 394 (480)
.+.++++++.|+++|++|......... ....+....+...+.|.+..+.+.+. |+ ++.+-|-- + +..
T Consensus 119 ~~~i~~A~~LGa~~vv~~~G~~g~~~~--~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv---~l~lE~~~~~~~~~~~~~ 193 (387)
T 1bxb_A 119 LETMDLGAELGAEIYVVWPGREGAEVE--ATGKARKVWDWVREALNFMAAYAEDQGYGY---RFALEPKPNEPRGDIYFA 193 (387)
T ss_dssp HHHHHHHHHHTCCEEEECCTTCEESCG--GGCGGGTHHHHHHHHHHHHHHHHHHHTCCC---EEEECCCSSSSSSEESSC
T ss_pred HHHHHHHHHhCCCEEEECCCCCCccCC--ccCCHHHHHHHHHHHHHHHHHHHHHhCCCc---EEEEecCCCCCCCCccCC
Confidence 357889999999999888631110000 00112344566778888999999888 78 58998843 1 345
Q ss_pred ChhHHHHHHHhc
Q 038230 395 KAEHNLDILLGL 406 (480)
Q Consensus 395 ~~~~~~~~lr~l 406 (480)
+..+.+++++.+
T Consensus 194 t~~~~~~ll~~v 205 (387)
T 1bxb_A 194 TVGSMLAFIHTL 205 (387)
T ss_dssp SHHHHHHHHTTS
T ss_pred CHHHHHHHHHHc
Confidence 666667777654
No 256
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=75.82 E-value=8 Score=37.29 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=63.9
Q ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeE----EEeCC----------CHHHH
Q 038230 237 VSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLV----SVDTF----------YSKVA 302 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pI----SIDT~----------~~~v~ 302 (480)
.+.++++++.||+-|=|=.+...++...++.++-.+++.-+++.-.+. ++|+ -.|.+ -.+.+
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~----g~~~~v~aRtd~~~~g~~~~~~~~~~ai 171 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVA----GVDVVINGRTDAVKLGADVFEDPMVEAI 171 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHH----TCCCEEEEEECHHHHCTTTSSSHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhc----CCCeEEEEEechhhccCCcchHHHHHHH
Confidence 788999999999999886654344556677777677776666554431 3442 23542 13444
Q ss_pred HHHHH---cCCCEEecCCCCCCC-chHHHHHHhcCCCEEEEc
Q 038230 303 SEAVG---KGAHIVNDVSAGQLD-PDMYKVVAGLKVPYVAMH 340 (480)
Q Consensus 303 ~aaL~---~G~~iINdVsg~~~d-~~m~~l~~~~~~~vVlmh 340 (480)
+.|.. +|+++|- +-+-. + +.+..++++.++|+.++.
T Consensus 172 ~ra~a~~eAGAd~i~-~e~~~-~~~~~~~i~~~~~~P~n~~~ 211 (255)
T 2qiw_A 172 KRIKLMEQAGARSVY-PVGLS-TAEQVERLVDAVSVPVNITA 211 (255)
T ss_dssp HHHHHHHHHTCSEEE-ECCCC-SHHHHHHHHTTCSSCBEEEC
T ss_pred HHHHHHHHcCCcEEE-EcCCC-CHHHHHHHHHhCCCCEEEEe
Confidence 44433 4999887 44443 4 667788888899987764
No 257
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=75.77 E-value=9.5 Score=35.48 Aligned_cols=75 Identities=17% Similarity=0.121 Sum_probs=45.6
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC---CccChhHH
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG---FSKKAEHN 399 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG---f~k~~~~~ 399 (480)
.+.++++++.|+++|.+|....+.. ...++..+...+.+.+..+.|.++|+ +|.+-|.-+ |..+..+.
T Consensus 87 ~~~i~~a~~lG~~~v~~~~g~~~~~------~~~~~~~~~~~~~l~~l~~~a~~~gv---~l~lEn~~~~~~~~~~~~~~ 157 (278)
T 1i60_A 87 KGMMETCKTLGVKYVVAVPLVTEQK------IVKEEIKKSSVDVLTELSDIAEPYGV---KIALEFVGHPQCTVNTFEQA 157 (278)
T ss_dssp HHHHHHHHHHTCCEEEEECCBCSSC------CCHHHHHHHHHHHHHHHHHHHGGGTC---EEEEECCCCTTBSSCSHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCC------CCHHHHHHHHHHHHHHHHHHHHhcCC---EEEEEecCCccchhcCHHHH
Confidence 3567778888888887764322211 11233445556677777777778888 488877543 45556665
Q ss_pred HHHHHhc
Q 038230 400 LDILLGL 406 (480)
Q Consensus 400 ~~~lr~l 406 (480)
.++++.+
T Consensus 158 ~~l~~~~ 164 (278)
T 1i60_A 158 YEIVNTV 164 (278)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666654
No 258
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=75.72 E-value=30 Score=34.55 Aligned_cols=91 Identities=14% Similarity=0.138 Sum_probs=60.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-+.+.+-.. | +++++++ +++++.. .+++|.+|. ++++. .+.++
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~iKik~~---~-------~~d~~~v----~avr~a~--~~~~l~vDan~~~~~~~-~~~~~ 209 (375)
T 1r0m_A 147 ADEQATVDLVRRHVEQGYRRIKLKIK---P-------GWDVQPV----RATREAF--PDIRLTVDANSAYTLAD-AGRLR 209 (375)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB---T-------TBSHHHH----HHHHHHC--TTSCEEEECTTCCCGGG-HHHHH
T ss_pred CCHHHHHHHHHHHHHhcccEEEEecC---h-------HHHHHHH----HHHHHHc--CCCeEEEeCCCCCCHHH-HHHHH
Confidence 37888999999999999999998641 2 2345554 4444432 378999994 34443 33332
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.|..+|-+--.....+.+..+.++.+++++.
T Consensus 210 ~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~ 244 (375)
T 1r0m_A 210 QLDEYDLTYIEQPLAWDDLVDHAELARRIRTPLCL 244 (375)
T ss_dssp TTGGGCCSCEECCSCTTCSHHHHHHHHHCSSCEEE
T ss_pred HHHhCCCcEEECCCCcccHHHHHHHHHhCCCCEEe
Confidence 3888887654322235677888888888876
No 259
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=75.56 E-value=45 Score=31.71 Aligned_cols=174 Identities=13% Similarity=0.198 Sum_probs=111.9
Q ss_pred cEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCC
Q 038230 211 TSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGK 290 (480)
Q Consensus 211 ~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~ 290 (480)
-.+.|||--. |.+.|+|++..+++.+..-..+-||....-| .+|+++..+-...+... .+-
T Consensus 37 hv~vGVlskn---------y~tve~av~~mk~y~~~~~~avSVGLGaGDp--------~Q~~~Va~Ia~~~~P~H--VNQ 97 (249)
T 3m0z_A 37 HVLVGVLSKN---------YPDVASAVVDMRDYAKLIDNALSVGLGAGDP--------NQSAMVSEISRQVQPQH--VNQ 97 (249)
T ss_dssp CEEEEEEGGG---------SSSHHHHHHHHHHHHHHTTTCEEEECSSSCG--------GGHHHHHHHHHHHCCSE--ECC
T ss_pred cEEEEEEeCC---------CCCHHHHHHHHHHHHHhCCCceEEecCCCCH--------HHHHHHHHHHHhcCCCc--ccc
Confidence 4588888654 7899999999999999998889999865555 56888877776666431 121
Q ss_pred eEEEeCCCHHHHHHHHHcCCCEEecC------------CCCC----CC------chHHHHHHhcCCCEE-EEcCCCCCCc
Q 038230 291 LVSVDTFYSKVASEAVGKGAHIVNDV------------SAGQ----LD------PDMYKVVAGLKVPYV-AMHMRGDPST 347 (480)
Q Consensus 291 pISIDT~~~~v~~aaL~~G~~iINdV------------sg~~----~d------~~m~~l~~~~~~~vV-lmh~~g~p~~ 347 (480)
++ .-.-..+++|...-.+||.. +-+. .. +..+.++++-|..-| .+++.|.-.
T Consensus 98 vF----tgag~t~~~L~~~~T~VNaLvsPTG~~G~VkIsTGp~Ss~~~~~~V~vetAiaml~dmG~~SvKffPm~Gl~~- 172 (249)
T 3m0z_A 98 VF----TGVATSRALLGQNETVVNGLVSPTGTPGMVKISTGPLSSGAADGIVPLETAIALLKDMGGSSIKYFPMGGLKH- 172 (249)
T ss_dssp BG----GGHHHHHHHHTSSCSEEEEEEBCCSSTTEEECCCSTTGGGSSCCEEEHHHHHHHHHHTTCCEEEECCCTTTTT-
T ss_pred cc----cchHHHHHhccCCCeEEEEEEcCCCccceEEeccCccccCCCCceeeHHHHHHHHHHcCCCeeeEeecCCccc-
Confidence 11 22334445555444677743 1110 01 246778888888777 667776431
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc-ccCCCcEEEeeccccccccc
Q 038230 348 MQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL-AASHAPILIGPSRKRFLGEI 426 (480)
Q Consensus 348 ~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l-~~~g~Pil~G~SrKsfi~~v 426 (480)
.+++....+.|-++|+ +|.|--|.... |++.|-++ ..-|+|..|-+=-.|.|..-
T Consensus 173 ----------------l~E~~avAka~a~~g~-----~lEPTGGIdl~---N~~~I~~i~l~aGv~~viPHIYssIIDk~ 228 (249)
T 3m0z_A 173 ----------------RAEFEAVAKACAAHDF-----WLEPTGGIDLE---NYSEILKIALDAGVSKIIPHIYSSIIDKA 228 (249)
T ss_dssp ----------------HHHHHHHHHHHHHTTC-----EEEEBSSCCTT---THHHHHHHHHHHTCSCBCCBCCGGGBCTT
T ss_pred ----------------HHHHHHHHHHHHHcCc-----eECCCCCccHh---hHHHHHHHHHHcCCCeecccccceeccCC
Confidence 2556677778888887 89994454332 33333322 23588888877777888777
Q ss_pred cCCCCc
Q 038230 427 CNRPSA 432 (480)
Q Consensus 427 ~g~~~~ 432 (480)
+|...|
T Consensus 229 TG~Trp 234 (249)
T 3m0z_A 229 SGNTRP 234 (249)
T ss_dssp TCCBCH
T ss_pred CCCCCH
Confidence 776533
No 260
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=75.30 E-value=25 Score=36.09 Aligned_cols=108 Identities=16% Similarity=0.117 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEE--eCCCC-------------CC------CCCCCCCHHHHHHHHHHHHHHHHcCCcCCC
Q 038230 231 QSVEAAVSQVRLMISEGADMID--IGAQS-------------TR------PMATKISAEKELERLIPVLEAVLTMPEMEG 289 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiID--IG~eS-------------tr------P~a~~v~~~eE~~rl~~vi~~l~~~~~~~~ 289 (480)
.++++..+.|++++++|-..+= +|... .. |+....+.++++++....|+++++... .+
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG-~d 226 (424)
T 3v3w_A 148 KDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFG-PD 226 (424)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHC-SS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcC-CC
Confidence 3689999999999999998764 56310 00 110112333456666666777776532 37
Q ss_pred CeEEEeCC---CHHHHHHH---HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 290 KLVSVDTF---YSKVASEA---VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 290 ~pISIDT~---~~~v~~aa---L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
++|.+|.. +++.+.+. |+ .|..+|-.-......+.+..+.+..++|+++-
T Consensus 227 ~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~d 283 (424)
T 3v3w_A 227 IHLLHDVHHRLTPIEAARLGKALEPYHLFWMEDAVPAENQESFKLIRQHTTTPLAVG 283 (424)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCSCEEEC
T ss_pred CcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECCCChHhHHHHHHHHhhCCCCEEEc
Confidence 89999954 45444333 32 38999976544322367888888889998873
No 261
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=75.11 E-value=42 Score=30.69 Aligned_cols=90 Identities=18% Similarity=0.191 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHH-HHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSK-VASEAV 306 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~-v~~aaL 306 (480)
.+.+++++.+++.- ..++++|||-+-- ...=.++|+.|++.. .+.++-+|.- .|+ +++++.
T Consensus 13 ~~~~~~~~~~~~~~-~~v~~~kv~~~~f------------~~~G~~~i~~l~~~~--p~~~v~lD~kl~dip~t~~~~~~ 77 (216)
T 1q6o_A 13 QTMDSAYETTRLIA-EEVDIIEVGTILC------------VGEGVRAVRDLKALY--PHKIVLADAKIADAGKILSRMCF 77 (216)
T ss_dssp SSHHHHHHHHHHHG-GGCSEEEECHHHH------------HHHCTHHHHHHHHHC--TTSEEEEEEEECSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHhc-ccCCEEEECHHHH------------HHhCHHHHHHHHHhC--CCCeEEEEEEecccHHHHHHHHH
Confidence 46788888887764 5689999994210 000013466666531 1334443321 233 456777
Q ss_pred HcCCCEEecCCCCCCC---chHHHHHHhcCCCE
Q 038230 307 GKGAHIVNDVSAGQLD---PDMYKVVAGLKVPY 336 (480)
Q Consensus 307 ~~G~~iINdVsg~~~d---~~m~~l~~~~~~~v 336 (480)
++|+++|+ +.+.... ...++.++++|.++
T Consensus 78 ~~Gad~it-vh~~~g~~~l~~~~~~~~~~g~~~ 109 (216)
T 1q6o_A 78 EANADWVT-VICCADINTAKGALDVAKEFNGDV 109 (216)
T ss_dssp HTTCSEEE-EETTSCHHHHHHHHHHHHHTTCEE
T ss_pred hCCCCEEE-EeccCCHHHHHHHHHHHHHcCCCc
Confidence 88999997 4433212 34556677788875
No 262
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=74.88 E-value=16 Score=37.07 Aligned_cols=102 Identities=10% Similarity=0.043 Sum_probs=60.4
Q ss_pred HHHHHHHH-HcCCCEEEeCCCCC-------CCCCC-------CC-CHHHHHHHHHHHHHHHHcCCcCCCCeEEE-----e
Q 038230 237 VSQVRLMI-SEGADMIDIGAQST-------RPMAT-------KI-SAEKELERLIPVLEAVLTMPEMEGKLVSV-----D 295 (480)
Q Consensus 237 ~~~A~~~v-~~GAdiIDIG~eSt-------rP~a~-------~v-~~~eE~~rl~~vi~~l~~~~~~~~~pISI-----D 295 (480)
.+.|+..+ ++|.|.|+|.+.-. .|... .- |.+...+.+..+|+++++... +-||+| |
T Consensus 177 ~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg--~~~v~vRis~~~ 254 (379)
T 3aty_A 177 VEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVG--SDRVGLRISPLN 254 (379)
T ss_dssp HHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHC--GGGEEEEECTTC
T ss_pred HHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcC--CCeEEEEECccc
Confidence 36677778 89999999976421 12211 12 677788888999999987632 125666 3
Q ss_pred C-------CCH----HHHHHHHHcCCCEEecCCCCC----CCchHHHHHHhcCCCEEEEc
Q 038230 296 T-------FYS----KVASEAVGKGAHIVNDVSAGQ----LDPDMYKVVAGLKVPYVAMH 340 (480)
Q Consensus 296 T-------~~~----~v~~aaL~~G~~iINdVsg~~----~d~~m~~l~~~~~~~vVlmh 340 (480)
. ... +++++.-++|+++|+-..+.. ...++..+.+..+.+|+..-
T Consensus 255 ~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~ir~~~~iPvi~~G 314 (379)
T 3aty_A 255 GVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNL 314 (379)
T ss_dssp CGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCCHHHHHHTTCCSCEEEES
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccHHHHHHHHHCCCcEEEEC
Confidence 2 122 233333346999998554320 11234445455678877643
No 263
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=74.45 E-value=5.6 Score=40.34 Aligned_cols=96 Identities=17% Similarity=0.100 Sum_probs=60.3
Q ss_pred ecCCCCCCCCCcc-CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCe-EEEe
Q 038230 218 NLTPDSFSDGGKF-QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKL-VSVD 295 (480)
Q Consensus 218 N~tpDSFsdgg~~-~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~p-ISID 295 (480)
=++|+.+.+|... .+.+++++.|+.+.+.|+|+|++-+... +. +.++.+++.. ++| |..-
T Consensus 225 Rls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~--~~-------------~~~~~ik~~~---~iPvi~~G 286 (362)
T 4ab4_A 225 HLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREA--DD-------------SIGPLIKEAF---GGPYIVNE 286 (362)
T ss_dssp EECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCC--TT-------------CCHHHHHHHH---CSCEEEES
T ss_pred EeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCC--CH-------------HHHHHHHHHC---CCCEEEeC
Confidence 4467665554322 2366789999999999999999964321 11 1233333321 334 3444
Q ss_pred CCCHHHHHHHHHcC-CCEEecCCCCCCCchHHHHHHh
Q 038230 296 TFYSKVASEAVGKG-AHIVNDVSAGQLDPDMYKVVAG 331 (480)
Q Consensus 296 T~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l~~~ 331 (480)
..+++.++++|+.| +|+|-=-.+.-.+|.+..-+++
T Consensus 287 git~e~a~~~l~~g~aD~V~iGR~~lanPdl~~k~~~ 323 (362)
T 4ab4_A 287 RFDKASANAALASGKADAVAFGVPFIANPDLPARLAA 323 (362)
T ss_dssp SCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHT
T ss_pred CCCHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHc
Confidence 45899999999997 8988644443346777666554
No 264
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=74.44 E-value=3.7 Score=40.57 Aligned_cols=78 Identities=15% Similarity=0.119 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCC----CCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC-------HH
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMA----TKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY-------SK 300 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a----~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~-------~~ 300 (480)
+++...+.|+...+. +|.|||++.+..++. -.-+.+...+.+..+++.+++. .+.||++...- .+
T Consensus 69 ~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~---~~~pv~vKir~G~~~~~~~~ 144 (318)
T 1vhn_A 69 EPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKS---VSGKFSVKTRLGWEKNEVEE 144 (318)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHH---CSSEEEEEEESCSSSCCHHH
T ss_pred CHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHh---hCCCEEEEecCCCChHHHHH
Confidence 357777888888888 999999986533210 0111223466777888888876 47899887432 13
Q ss_pred HHHHHHHcCCCEE
Q 038230 301 VASEAVGKGAHIV 313 (480)
Q Consensus 301 v~~aaL~~G~~iI 313 (480)
.++.+.++|++.|
T Consensus 145 ~a~~l~~~G~d~i 157 (318)
T 1vhn_A 145 IYRILVEEGVDEV 157 (318)
T ss_dssp HHHHHHHTTCCEE
T ss_pred HHHHHHHhCCCEE
Confidence 4444444455544
No 265
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=74.31 E-value=8.6 Score=39.00 Aligned_cols=140 Identities=12% Similarity=0.093 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE---eCCCHHHHHHHHH-
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQ-STRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV---DTFYSKVASEAVG- 307 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~e-StrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI---DT~~~~v~~aaL~- 307 (480)
..+.++.|.++...|..-+|+.|. ...| + ..+..+.++.+..++. ++++.+ -+..++-+..|+.
T Consensus 159 a~e~~~la~~~~~~~vvG~dL~g~E~~~~------~-~~~~~f~~~f~~A~~~----gl~~~~HagE~~~~~~i~~al~~ 227 (367)
T 3iar_A 159 SPKVVELCKKYQQQTVVAIDLAGDETIPG------S-SLLPGHVQAYQEAVKS----GIHRTVHAGEVGSAEVVKEAVDI 227 (367)
T ss_dssp HHHHHHHHHHTTTTTEEEEEEESCTTSTT------G-GGCHHHHHHHHHHHHH----TCEEEEEESSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCCEEEEcCCCcccCCC------c-chHHHHHHHHHHHHHc----CCeeEEecCCcCChHHHHHHHHc
Confidence 356778888877788888998763 2222 1 1112344455555654 788777 3457788889996
Q ss_pred cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCC----CCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCC
Q 038230 308 KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMR----GDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWR 383 (480)
Q Consensus 308 ~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~----g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~ 383 (480)
.|++-|-=-.....++++++.+++.++++.+++.. |.-.+.. ..-+..+.++|++
T Consensus 228 lg~~RIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~~~~~~------------------~hPi~~ll~~Gv~--- 286 (367)
T 3iar_A 228 LKTERLGHGYHTLEDQALYNRLRQENMHFEICPWSSYLTGAWKPDT------------------EHAVIRLKNDQAN--- 286 (367)
T ss_dssp SCCSEEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHHTSSSCTTS------------------CCHHHHHHHTTCC---
T ss_pred cCCceeeeeeeecCCHHHHHHHHhCCcEEEECHHHHHHhCCCCCcc------------------cChHHHHHHCCCE---
Confidence 68887643322333678999999999999998641 2111111 1223455678995
Q ss_pred EEE---ecCCCCccChhHHHHHHHh
Q 038230 384 III---DPGLGFSKKAEHNLDILLG 405 (480)
Q Consensus 384 Iil---DPgiGf~k~~~~~~~~lr~ 405 (480)
+.| ||++ |+.+..+.+.++..
T Consensus 287 v~l~TDdp~~-~~~~l~~e~~~a~~ 310 (367)
T 3iar_A 287 YSLNTDDPLI-FKSTLDTDYQMTKR 310 (367)
T ss_dssp EEECCBSHHH-HTCCHHHHHHHHHH
T ss_pred EEECCCCccc-cCCCHHHHHHHHHH
Confidence 666 5655 55566666766654
No 266
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=74.19 E-value=61 Score=30.76 Aligned_cols=76 Identities=11% Similarity=-0.003 Sum_probs=52.2
Q ss_pred chHHHHHHhcCCCEEEEcCC---CCCCcccccccc-chhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCC----CCcc
Q 038230 323 PDMYKVVAGLKVPYVAMHMR---GDPSTMQNEENL-QYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGL----GFSK 394 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~---g~p~~~~~~~~~-~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgi----Gf~k 394 (480)
.+.++++++.|+++|+.+.. |... ... .+++..+...+.|.+..+.|.++|| +|.+-|.- .+..
T Consensus 110 ~~~i~~A~~lG~~~v~~~~~~~~g~~~-----~~~~~~~~~~~~~~~~l~~l~~~a~~~gv---~l~lEn~~~~~~~~~~ 181 (309)
T 2hk0_A 110 ERTLSNVAKLDIHTIGGALHSYWPIDY-----SQPVDKAGDYARGVEGINGIADFANDLGI---NLCIEVLNRFENHVLN 181 (309)
T ss_dssp HHHHHHHHHTTCCEEEECTTSCSSCCT-----TSCCCHHHHHHHHHHHHHHHHHHHHHTTC---EEEEECCCTTTCSSCC
T ss_pred HHHHHHHHHcCCCEEEeeccccccccC-----CCcCChHHHHHHHHHHHHHHHHHHHHcCC---EEEEeecccccccccC
Confidence 46789999999999987641 2210 001 2244556677888888999999999 49999853 2455
Q ss_pred ChhHHHHHHHhc
Q 038230 395 KAEHNLDILLGL 406 (480)
Q Consensus 395 ~~~~~~~~lr~l 406 (480)
+..+..++++.+
T Consensus 182 ~~~~~~~l~~~v 193 (309)
T 2hk0_A 182 TAAEGVAFVKDV 193 (309)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHc
Confidence 667767777765
No 267
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=74.16 E-value=34 Score=34.51 Aligned_cols=96 Identities=9% Similarity=0.034 Sum_probs=61.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-+.|.|-+. .. +.+...+++ +++++... .+++|.||.. +++.+.+.++
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g-----~~--~~~~~~e~v----~avR~a~G-~d~~l~vDan~~~~~~~a~~~~~ 215 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPM-----LD--SLSISIQFV----EKVREIVG-DELPLMLDLAVPEDLDQTKSFLK 215 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCC-----CS--SHHHHHHHH----HHHHHHHC-SSSCEEEECCCCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccC-----CC--hHHHHHHHH----HHHHHHhC-CCCEEEEEcCCCCCHHHHHHHHH
Confidence 47899999999999999999998642 11 134445544 44444311 2789999953 5544433332
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+|.++|-+--.....+.+..+.+..++|++.
T Consensus 216 ~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~ 250 (391)
T 2qgy_A 216 EVSSFNPYWIEEPVDGENISLLTEIKNTFNMKVVT 250 (391)
T ss_dssp HHGGGCCSEEECSSCTTCHHHHHHHHHHCSSCEEE
T ss_pred HHHhcCCCeEeCCCChhhHHHHHHHHhhCCCCEEE
Confidence 4999997643322125667777778888886
No 268
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=74.00 E-value=5.6 Score=39.31 Aligned_cols=61 Identities=13% Similarity=0.080 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEe
Q 038230 237 VSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iIN 314 (480)
++.++.+.+.|||+||.-..-+. .+ +++.+++.. .++++-+|..+.+.++.+++.|+++|-
T Consensus 90 ide~qil~aaGAD~Id~s~~~~~--~~-------------li~~i~~~~--~g~~vvv~v~~~~Ea~~a~~~Gad~I~ 150 (297)
T 4adt_A 90 FVEAQILEELKVDMLDESEVLTM--AD-------------EYNHINKHK--FKTPFVCGCTNLGEALRRISEGASMIR 150 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCC--SC-------------SSCCCCGGG--CSSCEEEEESSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHcCCCEEEcCCCCCH--HH-------------HHHHHHhcC--CCCeEEEEeCCHHHHHHHHhCCCCEEE
Confidence 45666777999999954211111 11 122233311 267888899999999999999999885
No 269
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=73.96 E-value=27 Score=36.07 Aligned_cols=106 Identities=11% Similarity=0.016 Sum_probs=70.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEe--CCCCC----------------------------CCCCCCCCHHHHHHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDI--GAQST----------------------------RPMATKISAEKELERLIPVLEA 280 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDI--G~eSt----------------------------rP~a~~v~~~eE~~rl~~vi~~ 280 (480)
.++++..++|++++++|-..+=+ |.... .|+ ...+.++++++....+++
T Consensus 154 ~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~v~a 232 (440)
T 3t6c_A 154 ADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPG-IYFDPEAYAKSIPRLFDH 232 (440)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSS-EECCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccccccccccccccc-ccccchhhHHHHHHHHHH
Confidence 47899999999999999988764 43210 121 124555667777777788
Q ss_pred HHcCCcCCCCeEEEeCC---CHHHHHHHHH----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 281 VLTMPEMEGKLVSVDTF---YSKVASEAVG----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 281 l~~~~~~~~~pISIDT~---~~~v~~aaL~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+++... .+++|.||.. +++.+.+.++ .|..+|-.-......+.+..+.++.++|+++
T Consensus 233 vR~a~G-~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~ 296 (440)
T 3t6c_A 233 LRNKLG-FSVELLHDAHERITPINAIHMAKALEPYQLFFLEDPVAPENTEWLKMLRQQSSTPIAM 296 (440)
T ss_dssp HHHHHC-SSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECSSCGGGGGGHHHHHHHCCSCEEE
T ss_pred HHHhcC-CCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhhcCCCEEe
Confidence 877532 3789999964 5555444333 3888887554322125688888888999887
No 270
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=73.68 E-value=51 Score=32.70 Aligned_cols=105 Identities=19% Similarity=0.064 Sum_probs=69.4
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE--EeCCCH--
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQST------RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS--VDTFYS-- 299 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eSt------rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS--IDT~~~-- 299 (480)
|.+++.+.+.++++++.||.-|=|=.+.. .+|...++.++-.+|+.-++++... .+..|- -|++-.
T Consensus 112 yg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~----~~~~I~ARtda~a~~g 187 (318)
T 1zlp_A 112 GGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGD----SDFFLVARTDARAPHG 187 (318)
T ss_dssp SSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTT----SCCEEEEEECTHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhccc----CCcEEEEeeHHhhhcC
Confidence 66889999999999999999988754432 1234467766666777666655542 144333 355532
Q ss_pred --HHHHHHHH---cCCCEEecCCCCCCC-chHHHHHHhcCCCEEEEc
Q 038230 300 --KVASEAVG---KGAHIVNDVSAGQLD-PDMYKVVAGLKVPYVAMH 340 (480)
Q Consensus 300 --~v~~aaL~---~G~~iINdVsg~~~d-~~m~~l~~~~~~~vVlmh 340 (480)
+.++.|.. +|||+|- +-+.. + +.+..++++..+|+++..
T Consensus 188 l~~ai~Ra~Ay~eAGAd~i~-~e~~~-~~e~~~~i~~~l~~P~lan~ 232 (318)
T 1zlp_A 188 LEEGIRRANLYKEAGADATF-VEAPA-NVDELKEVSAKTKGLRIANM 232 (318)
T ss_dssp HHHHHHHHHHHHHTTCSEEE-ECCCC-SHHHHHHHHHHSCSEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEE-EcCCC-CHHHHHHHHHhcCCCEEEEe
Confidence 44544433 5999987 44444 4 678888889999987543
No 271
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=73.66 E-value=8.6 Score=39.03 Aligned_cols=67 Identities=10% Similarity=0.116 Sum_probs=45.7
Q ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCEEe
Q 038230 236 AVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~iIN 314 (480)
..++++.++++|+|+|-|...- +. . + .+...|+.+++.. .+++|-. ....++.++++.++|+|.|-
T Consensus 109 ~~~~~~~lieaGvd~I~idta~---G~----~-~---~~~~~I~~ik~~~--p~v~Vi~G~v~t~e~A~~a~~aGAD~I~ 175 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSH---GH----S-E---GVLQRIRETRAAY--PHLEIIGGNVATAEGARALIEAGVSAVK 175 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSC---TT----S-H---HHHHHHHHHHHHC--TTCEEEEEEECSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHhCCCCEEEEeCCC---CC----C-H---HHHHHHHHHHHhc--CCCceEeeeeCCHHHHHHHHHcCCCEEE
Confidence 4567889999999999885311 11 1 1 2333456666542 2667644 67889999999999999987
Q ss_pred c
Q 038230 315 D 315 (480)
Q Consensus 315 d 315 (480)
-
T Consensus 176 v 176 (366)
T 4fo4_A 176 V 176 (366)
T ss_dssp E
T ss_pred E
Confidence 3
No 272
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=73.62 E-value=25 Score=35.00 Aligned_cols=95 Identities=16% Similarity=0.145 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~ 307 (480)
.++++..++|++++++|-..+-+-.. . +.+++++++..+-+.+- .+++|.+|. ++++.+.+.++
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g-----~---~~~~d~~~v~avR~a~g-----~~~~l~vDan~~~~~~~a~~~~~ 204 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVG-----T---GIEADIARVKAIREAVG-----FDIKLRLDANQAWTPKDAVKAIQ 204 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECC-----S---CHHHHHHHHHHHHHHHC-----TTSEEEEECTTCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeC-----C---CHHHHHHHHHHHHHHcC-----CCCeEEEECCCCCCHHHHHHHHH
Confidence 47899999999999999999997642 1 23566776543333331 378999994 56665544433
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.|..+|-+--.....+.+..+.++.++|+++
T Consensus 205 ~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~ 239 (354)
T 3jva_A 205 ALADYQIELVEQPVKRRDLEGLKYVTSQVNTTIMA 239 (354)
T ss_dssp HTTTSCEEEEECCSCTTCHHHHHHHHHHCSSEEEE
T ss_pred HHHhcCCCEEECCCChhhHHHHHHHHHhCCCCEEE
Confidence 3778887544322125677777788888887
No 273
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=73.59 E-value=16 Score=34.25 Aligned_cols=75 Identities=5% Similarity=0.025 Sum_probs=48.4
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC-CccChhHHHH
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG-FSKKAEHNLD 401 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG-f~k~~~~~~~ 401 (480)
.+.+++|++.|+++|.+|....+... ..++..+...+.|.+..+.|.++|| ++.+-|.-+ |..+..+..+
T Consensus 87 ~~~i~~A~~lG~~~v~~~~g~~~~~~------~~~~~~~~~~~~l~~l~~~a~~~Gv---~l~lE~~~~~~~~~~~~~~~ 157 (286)
T 3dx5_A 87 EQLAILANWFKTNKIRTFAGQKGSAD------FSQQERQEYVNRIRMICELFAQHNM---YVLLETHPNTLTDTLPSTLE 157 (286)
T ss_dssp HHHHHHHHHHTCCEEEECSCSSCGGG------SCHHHHHHHHHHHHHHHHHHHHTTC---EEEEECCTTSTTSSHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEcCCCCCccc------CcHHHHHHHHHHHHHHHHHHHHhCC---EEEEecCCCcCcCCHHHHHH
Confidence 35788888889888887764322110 1123345566777888888888888 488888544 3455666666
Q ss_pred HHHhc
Q 038230 402 ILLGL 406 (480)
Q Consensus 402 ~lr~l 406 (480)
+++.+
T Consensus 158 l~~~~ 162 (286)
T 3dx5_A 158 LLGEV 162 (286)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 66654
No 274
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=73.43 E-value=14 Score=34.47 Aligned_cols=71 Identities=17% Similarity=0.132 Sum_probs=45.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE--eCCCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV--DTFYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI--DT~~~~v~~aaL~~ 308 (480)
++.+++.+.++...+.|||+|..+..-..+|+ +. +.+..+ .+.+.. ++||-. +-.+++.+.+.+++
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~tstg~~~gga---~~-~~i~~v---~~~v~~-----~ipVia~GGI~t~~da~~~l~a 196 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKTSTGFAPRGT---TL-EEVRLI---KSSAKG-----RIKVKASGGIRDLETAISMIEA 196 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSCSSSCC---CH-HHHHHH---HHHHTT-----SSEEEEESSCCSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECCCCCCCCC---CH-HHHHHH---HHHhCC-----CCcEEEECCCCCHHHHHHHHHh
Confidence 57778899999999999999976632111222 11 222222 222221 355444 56778999999999
Q ss_pred CCCEE
Q 038230 309 GAHIV 313 (480)
Q Consensus 309 G~~iI 313 (480)
|++.|
T Consensus 197 GA~~i 201 (225)
T 1mzh_A 197 GADRI 201 (225)
T ss_dssp TCSEE
T ss_pred CchHH
Confidence 99976
No 275
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=73.34 E-value=11 Score=37.67 Aligned_cols=76 Identities=21% Similarity=0.192 Sum_probs=52.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE---eCCCHH--HHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV---DTFYSK--VASEA 305 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI---DT~~~~--v~~aa 305 (480)
.+++.+++.++.+.+.||++|-+..- +. . .. .++..++ ++.+++... .++||++ ||+--. ...+|
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~i~l~DT-~G--~--~~-P~~v~~l---v~~l~~~~~-~~~pi~~H~Hn~~G~avAn~laA 215 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATCIYMADS-GG--A--MS-MNDIRDR---MRAFKAVLK-PETQVGMHAHHNLSLGVANSIVA 215 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECT-TC--C--CC-HHHHHHH---HHHHHHHSC-TTSEEEEECBCTTSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCC-cC--c--cC-HHHHHHH---HHHHHHhcC-CCceEEEEECCCccHHHHHHHHH
Confidence 57899999999999999999988742 11 1 11 2445544 555565421 1689999 555444 45788
Q ss_pred HHcCCCEEecC
Q 038230 306 VGKGAHIVNDV 316 (480)
Q Consensus 306 L~~G~~iINdV 316 (480)
+++|+++|...
T Consensus 216 ~~aGa~~vd~t 226 (345)
T 1nvm_A 216 VEEGCDRVDAS 226 (345)
T ss_dssp HHTTCCEEEEB
T ss_pred HHcCCCEEEec
Confidence 88999998643
No 276
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=73.15 E-value=5.7 Score=37.41 Aligned_cols=89 Identities=13% Similarity=0.039 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcCCCE
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKGAHI 312 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G~~i 312 (480)
+.++.|+++.+.||+.|.+-..+......... ...++.+++. .++|+.+. -.+++.++++++.|++.
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~--------~~~i~~i~~~---~~ipvi~~Ggi~~~~~~~~~l~~Gad~ 104 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYD--------TEMIRFVRPL---TTLPIIASGGAGKMEHFLEAFLRGADK 104 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCC--------HHHHHHHGGG---CCSCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCccc--------HHHHHHHHHh---CCCCEEEeCCCCCHHHHHHHHHcCCCe
Confidence 46788999999999999663221111001111 2345666665 47888876 46889999999999998
Q ss_pred EecCCCCCCCch-HHHHHHhcCC
Q 038230 313 VNDVSAGQLDPD-MYKVVAGLKV 334 (480)
Q Consensus 313 INdVsg~~~d~~-m~~l~~~~~~ 334 (480)
|-=-+....+++ +.++++.++.
T Consensus 105 V~ig~~~l~dp~~~~~~~~~~g~ 127 (247)
T 3tdn_A 105 VSINTAAVENPSLITQIAQTFGS 127 (247)
T ss_dssp ECCSHHHHHCTHHHHHHHHHHC-
T ss_pred eehhhHHhhChHHHHHHHHHhCC
Confidence 742222112455 4566667763
No 277
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=73.11 E-value=33 Score=33.68 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=65.4
Q ss_pred HHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC----------CH-HH----HHH
Q 038230 240 VRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF----------YS-KV----ASE 304 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~----------~~-~v----~~a 304 (480)
+++.++.|||.+=+=+-- ++. -++.+.++.+..++++.++. ++|+-++.+ .| +. +++
T Consensus 114 ve~a~~~GAdaV~vlv~~-~~d---~~~~~~~~~i~~v~~~~~~~----G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~ 185 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLW-RSD---EDAQQRLNMVKEFNELCHSN----GLLSIIEPVVRPPRCGDKFDREQAIIDAAKE 185 (304)
T ss_dssp HHHHHHTTCCEEEEEEEE-CTT---SCHHHHHHHHHHHHHHHHTT----TCEEEEEEEECCCSSCSCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEc-CCC---ccHHHHHHHHHHHHHHHHHc----CCcEEEEEECCCCccccCCChhHHHHHHHHH
Confidence 344567799999832210 011 12456677777777777765 899888875 22 33 444
Q ss_pred HHHcCCCEEecCC---CCCCCchHHHHHHh----cCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHC
Q 038230 305 AVGKGAHIVNDVS---AGQLDPDMYKVVAG----LKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELS 377 (480)
Q Consensus 305 aL~~G~~iINdVs---g~~~d~~m~~l~~~----~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~ 377 (480)
+.+.|+|++-==. +....+.+.++++. .+.|+|++ ..|.+. +.|.+.+..+.++
T Consensus 186 a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~-aGG~~~------------------~~~~~~~~~a~~a 246 (304)
T 1to3_A 186 LGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVIL-SSGVDE------------------KLFPRAVRVAMEA 246 (304)
T ss_dssp HTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEEC-CTTSCT------------------TTHHHHHHHHHHT
T ss_pred HHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEE-ecCCCH------------------HHHHHHHHHHHHc
Confidence 5556999985211 10112567777777 68883432 334421 2244566666778
Q ss_pred CCC
Q 038230 378 GIP 380 (480)
Q Consensus 378 Gi~ 380 (480)
|..
T Consensus 247 Ga~ 249 (304)
T 1to3_A 247 GAS 249 (304)
T ss_dssp TCC
T ss_pred CCe
Confidence 885
No 278
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=72.89 E-value=20 Score=35.91 Aligned_cols=65 Identities=12% Similarity=0.182 Sum_probs=42.8
Q ss_pred HHHHHHHHHHc--CCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCE
Q 038230 236 AVSQVRLMISE--GADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHI 312 (480)
Q Consensus 236 a~~~A~~~v~~--GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~i 312 (480)
..++++.+++. |+++|-+-.. .+ +.. .+...|+.+++.. .++||.+ +-..++.++.|.++|+|.
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~---~g----~~~----~~~~~i~~lr~~~--~~~~vi~g~v~t~e~A~~a~~aGaD~ 185 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVA---NG----YSE----HFVEFVKDVRKRF--PQHTIMAGNVVTGEMVEELILSGADI 185 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECS---CT----TBH----HHHHHHHHHHHHC--TTSEEEEEEECSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHhccCCCCEEEEEec---CC----CcH----HHHHHHHHHHHhc--CCCeEEEEeCCCHHHHHHHHHhCCCE
Confidence 35678888887 9999765321 11 111 2234456666642 1677664 556799999999999999
Q ss_pred E
Q 038230 313 V 313 (480)
Q Consensus 313 I 313 (480)
|
T Consensus 186 I 186 (351)
T 2c6q_A 186 I 186 (351)
T ss_dssp E
T ss_pred E
Confidence 9
No 279
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=72.83 E-value=31 Score=32.47 Aligned_cols=40 Identities=13% Similarity=0.191 Sum_probs=20.7
Q ss_pred EEEEecCCC-CCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCC
Q 038230 214 MGILNLTPD-SFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQ 256 (480)
Q Consensus 214 mGIlN~tpD-SFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~e 256 (480)
.|+-..|+| ||...-...+.+++++.+ .+.|.+.|++...
T Consensus 23 lg~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~G~~~vEl~~~ 63 (290)
T 2zvr_A 23 LSLVISTSDAAFDALAFKGDLRKGMELA---KRVGYQAVEIAVR 63 (290)
T ss_dssp EEEEECCCC-------CHHHHHHHHHHH---HHHTCSEEEEECS
T ss_pred eEEecccchhhccccccccCHHHHHHHH---HHhCCCEEEEcCC
Confidence 566555554 453221112445555444 4569999999864
No 280
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=72.56 E-value=12 Score=34.87 Aligned_cols=86 Identities=16% Similarity=0.223 Sum_probs=51.3
Q ss_pred HHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC--------------C-HHHHH
Q 038230 239 QVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF--------------Y-SKVAS 303 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~--------------~-~~v~~ 303 (480)
+++++++.|||.+-+|.++. ....++..+++.+-. .+.+++|.. + .+.++
T Consensus 89 ~~~~~l~~Gad~V~lg~~~l----------~~p~~~~~~~~~~g~-----~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~ 153 (244)
T 1vzw_A 89 TLAAALATGCTRVNLGTAAL----------ETPEWVAKVIAEHGD-----KIAVGLDVRGTTLRGRGWTRDGGDLYETLD 153 (244)
T ss_dssp HHHHHHHTTCSEEEECHHHH----------HCHHHHHHHHHHHGG-----GEEEEEEEETTEECCSSSCCCCCBHHHHHH
T ss_pred HHHHHHHcCCCEEEECchHh----------hCHHHHHHHHHHcCC-----cEEEEEEccCCEEEEcCcccCCCCHHHHHH
Confidence 47778889999999996431 112334444444331 466888865 3 45678
Q ss_pred HHHHcCCC--EEecCCCCC----CCchH-HHHHHhcCCCEEEE
Q 038230 304 EAVGKGAH--IVNDVSAGQ----LDPDM-YKVVAGLKVPYVAM 339 (480)
Q Consensus 304 aaL~~G~~--iINdVsg~~----~d~~m-~~l~~~~~~~vVlm 339 (480)
++.+.|++ ++++++... .+.++ .++.+..+.++|..
T Consensus 154 ~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~~~ipvia~ 196 (244)
T 1vzw_A 154 RLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVAS 196 (244)
T ss_dssp HHHHTTCCCEEEEEC-------CCCHHHHHHHHHTCSSCEEEE
T ss_pred HHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHhcCCCEEEE
Confidence 88888888 557765321 13333 44445567888863
No 281
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=72.54 E-value=12 Score=37.84 Aligned_cols=102 Identities=13% Similarity=0.133 Sum_probs=64.2
Q ss_pred ecCCCCCCCC-CccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE-Ee
Q 038230 218 NLTPDSFSDG-GKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS-VD 295 (480)
Q Consensus 218 N~tpDSFsdg-g~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS-ID 295 (480)
=++|+.++.| .--.+.+++++.|+.+.+.|+|+|++.... ..+..... + ..++.+++. .++||. +=
T Consensus 233 ris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~-~~~~~~~~----~----~~~~~i~~~---~~iPvi~~G 300 (365)
T 2gou_A 233 RLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVD-WDDAPDTP----V----SFKRALREA---YQGVLIYAG 300 (365)
T ss_dssp EECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCB-TTBCCCCC----H----HHHHHHHHH---CCSEEEEES
T ss_pred EEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC-cCCCCCcc----H----HHHHHHHHH---CCCcEEEeC
Confidence 3466554322 112467889999999999999999997532 11111111 1 234455554 255644 34
Q ss_pred CCCHHHHHHHHHcC-CCEEecCCCCCCCchHHHHHHh
Q 038230 296 TFYSKVASEAVGKG-AHIVNDVSAGQLDPDMYKVVAG 331 (480)
Q Consensus 296 T~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l~~~ 331 (480)
-.+++.++++|+.| +|+|-=-++.-.+|.+..-+++
T Consensus 301 gi~~~~a~~~l~~g~aD~V~igR~~i~~P~l~~~~~~ 337 (365)
T 2gou_A 301 RYNAEKAEQAINDGLADMIGFGRPFIANPDLPERLRH 337 (365)
T ss_dssp SCCHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHH
T ss_pred CCCHHHHHHHHHCCCcceehhcHHHHhCchHHHHHHc
Confidence 44799999999998 9999755554446777766654
No 282
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=72.52 E-value=9.9 Score=40.06 Aligned_cols=70 Identities=20% Similarity=0.249 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHH------HHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcC
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAE------KELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKG 309 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~------eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G 309 (480)
+.|+.++++|||.|.+|+. ||+.-.+.+ ..+..+..+.+.+++. ++||-.| -.+++-+.+|+.+|
T Consensus 284 e~a~~l~~aGaD~I~Vg~g---~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~----~iPVIa~GGI~~~~di~kala~G 356 (496)
T 4fxs_A 284 EGARALIEAGVSAVKVGIG---PGSICTTRIVTGVGVPQITAIADAAGVANEY----GIPVIADGGIRFSGDISKAIAAG 356 (496)
T ss_dssp HHHHHHHHHTCSEEEECSS---CCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG----TCCEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCEEEECCC---CCcCcccccccCCCccHHHHHHHHHHHhccC----CCeEEEeCCCCCHHHHHHHHHcC
Confidence 3567888999999999853 333211110 1234444555555443 6888885 67899999999999
Q ss_pred CCEEe
Q 038230 310 AHIVN 314 (480)
Q Consensus 310 ~~iIN 314 (480)
|+.+-
T Consensus 357 Ad~V~ 361 (496)
T 4fxs_A 357 ASCVM 361 (496)
T ss_dssp CSEEE
T ss_pred CCeEE
Confidence 98765
No 283
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=72.43 E-value=75 Score=31.05 Aligned_cols=108 Identities=13% Similarity=0.078 Sum_probs=68.4
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCC--------CCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE--EeCC-C
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTR--------PMATKISAEKELERLIPVLEAVLTMPEMEGKLVS--VDTF-Y 298 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStr--------P~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS--IDT~-~ 298 (480)
|.+.+.+.+.++++++.||.-|=|=.+..- ++...++.++-.+|+.-++++-.. .+..|- -|++ .
T Consensus 90 yg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~----~~~~i~aRtda~~a 165 (295)
T 1s2w_A 90 YGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTD----PDFCIVARVEAFIA 165 (295)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSS----TTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhccc----CCcEEEEeehHHhc
Confidence 556788999999999999999887554311 123456666666776555543321 243332 3666 2
Q ss_pred ----HHHHHHHHH---cCCCEEecCCCCCCCchHHHHHHhcC--CCEEEEcC
Q 038230 299 ----SKVASEAVG---KGAHIVNDVSAGQLDPDMYKVVAGLK--VPYVAMHM 341 (480)
Q Consensus 299 ----~~v~~aaL~---~G~~iINdVsg~~~d~~m~~l~~~~~--~~vVlmh~ 341 (480)
.+.++.|.. +|||+|-=-.+....+++..++++.. +|++++..
T Consensus 166 ~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i~~~~ 217 (295)
T 1s2w_A 166 GWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVPT 217 (295)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEECCS
T ss_pred cccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEEEeCC
Confidence 566665544 59999973222232367788888877 89987644
No 284
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=72.40 E-value=39 Score=33.06 Aligned_cols=106 Identities=13% Similarity=0.184 Sum_probs=68.8
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCC------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE--EeCCC---
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQS------TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS--VDTFY--- 298 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eS------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS--IDT~~--- 298 (480)
|.+++.+.+.++++++.||.-+=|=.+. ..++. .++.++-.+++.-++++-.. .+..|- -|+ -
T Consensus 93 yg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~~----~~~~i~aRtda-a~~g 166 (287)
T 3b8i_A 93 YGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEARVD----PALTIIARTNA-ELID 166 (287)
T ss_dssp SSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHCCS----TTSEEEEEEET-TTSC
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcCCC----CCcEEEEechh-hhcC
Confidence 5688999999999999999998885442 13444 77776666666544433221 233332 355 3
Q ss_pred -HHHHHHHHH---cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCC
Q 038230 299 -SKVASEAVG---KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRG 343 (480)
Q Consensus 299 -~~v~~aaL~---~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g 343 (480)
.+.++.|.. +||+.|- +-+-...+.+..++++.++|++ |...|
T Consensus 167 l~~ai~Ra~ay~eAGAd~i~-~e~~~~~~~~~~i~~~~~~P~i-i~~~g 213 (287)
T 3b8i_A 167 VDAVIQRTLAYQEAGADGIC-LVGVRDFAHLEAIAEHLHIPLM-LVTYG 213 (287)
T ss_dssp HHHHHHHHHHHHHTTCSEEE-EECCCSHHHHHHHHTTCCSCEE-EECTT
T ss_pred HHHHHHHHHHHHHcCCCEEE-ecCCCCHHHHHHHHHhCCCCEE-EeCCC
Confidence 356655544 5999887 4444312678888888999999 54333
No 285
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=72.39 E-value=11 Score=35.34 Aligned_cols=74 Identities=9% Similarity=0.088 Sum_probs=52.0
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCC-----C-CccCh
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGL-----G-FSKKA 396 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgi-----G-f~k~~ 396 (480)
.+.++++++.|+++|.+|.. .|.. ..+++..+...+.|.+..+.|.+.|| +|.+-|.- + +..+.
T Consensus 96 ~~~i~~A~~lGa~~v~~~~g-~~~~------~~~~~~~~~~~~~l~~l~~~a~~~Gv---~l~lE~~n~~~~~~~~~~~~ 165 (269)
T 3ngf_A 96 DIALHYALALDCRTLHAMSG-ITEG------LDRKACEETFIENFRYAADKLAPHGI---TVLVEPLNTRNMPGYFIVHQ 165 (269)
T ss_dssp HHHHHHHHHTTCCEEECCBC-BCTT------SCHHHHHHHHHHHHHHHHHHHGGGTC---EEEECCCCTTTSTTBSCCCH
T ss_pred HHHHHHHHHcCCCEEEEccC-CCCC------CCHHHHHHHHHHHHHHHHHHHHHcCC---EEEEeeCCcccCccchhcCH
Confidence 35788899999999988764 4321 12244556677888888899999999 49998721 2 45566
Q ss_pred hHHHHHHHhc
Q 038230 397 EHNLDILLGL 406 (480)
Q Consensus 397 ~~~~~~lr~l 406 (480)
.+..++++.+
T Consensus 166 ~~~~~l~~~v 175 (269)
T 3ngf_A 166 LEAVGLVKRV 175 (269)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7777777765
No 286
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=72.26 E-value=45 Score=33.32 Aligned_cols=79 Identities=11% Similarity=0.048 Sum_probs=52.7
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCC--CCCCCEEEecCCC------Ccc
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSG--IPAWRIIIDPGLG------FSK 394 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~G--i~~~~IilDPgiG------f~k 394 (480)
.+.++++++.|+++|++|....+... .....+++..+.+.+.|.+..+.|.++| + +|.+-|.-+ +..
T Consensus 119 ~~~i~~A~~LGa~~vvv~~g~~~~~~--~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v---~l~lE~~~~e~~~~~~~~ 193 (386)
T 1muw_A 119 IRNIDLAVELGAKTYVAWGGREGAES--GAAKDVRVALDRMKEAFDLLGEYVTSQGYDI---RFAIEPKPNEPRGDILLP 193 (386)
T ss_dssp HHHHHHHHHHTCSEEEECCTTCEESS--TTSCCHHHHHHHHHHHHHHHHHHHHHHTCCC---EEEECCCSSSSSSEESSC
T ss_pred HHHHHHHHHhCCCEEEECCCCCcccc--cccCCHHHHHHHHHHHHHHHHHHHHhcCCCe---EEEEeeCCCCCcccccCC
Confidence 35788999999999998863211000 0001224455667788889999999999 7 588888532 455
Q ss_pred ChhHHHHHHHhc
Q 038230 395 KAEHNLDILLGL 406 (480)
Q Consensus 395 ~~~~~~~~lr~l 406 (480)
+..+.+++++.+
T Consensus 194 t~~~~~~li~~v 205 (386)
T 1muw_A 194 TVGHALAFIERL 205 (386)
T ss_dssp SHHHHHHHHTTS
T ss_pred CHHHHHHHHHHh
Confidence 677777777764
No 287
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=72.16 E-value=31 Score=34.78 Aligned_cols=101 Identities=19% Similarity=0.158 Sum_probs=59.8
Q ss_pred HHHHHHHHHHcCCCEEEeCCCC-------------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC-----
Q 038230 236 AVSQVRLMISEGADMIDIGAQS-------------TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF----- 297 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~eS-------------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~----- 297 (480)
-.+.|+...++|.|.|+|.+.- .|...-.-|.+...+.+..+|+++++... .+ ||+|--.
T Consensus 155 f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg-~~-~v~vRls~~~~~ 232 (362)
T 4ab4_A 155 YRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWG-AQ-RVGVHLAPRADA 232 (362)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC-GG-GEEEEECTTCCS
T ss_pred HHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcC-CC-ceEEEeeccccc
Confidence 3355777888999999998752 12211133567778888899999987632 12 5555211
Q ss_pred ------C-----HHHHHHHHHcCCCEEecCCCCCCCchHHHHHH-hcCCCEEEE
Q 038230 298 ------Y-----SKVASEAVGKGAHIVNDVSAGQLDPDMYKVVA-GLKVPYVAM 339 (480)
Q Consensus 298 ------~-----~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~-~~~~~vVlm 339 (480)
+ .+++++.-++|+++|. +++....+.++..++ ..+.+||..
T Consensus 233 ~g~~~~~~~~~~~~la~~l~~~Gvd~i~-v~~~~~~~~~~~~ik~~~~iPvi~~ 285 (362)
T 4ab4_A 233 HDMGDADRAETFTYVARELGKRGIAFIC-SREREADDSIGPLIKEAFGGPYIVN 285 (362)
T ss_dssp SSCCCTTHHHHHHHHHHHHHHTTCSEEE-EECCCCTTCCHHHHHHHHCSCEEEE
T ss_pred cccCCCCcHHHHHHHHHHHHHhCCCEEE-ECCCCCCHHHHHHHHHHCCCCEEEe
Confidence 1 1224444456999998 443322234444444 457887765
No 288
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=72.15 E-value=16 Score=37.95 Aligned_cols=47 Identities=21% Similarity=0.231 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVL 282 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~ 282 (480)
+++..+.|+++. .|||+|+||..| |+.......++-+.+..+++.++
T Consensus 196 ~~dy~~~a~~l~-~~aD~ieiNisc--Pnt~Glr~lq~~~~l~~il~~v~ 242 (443)
T 1tv5_A 196 VDDLKYCINKIG-RYADYIAINVSS--PNTPGLRDNQEAGKLKNIILSVK 242 (443)
T ss_dssp HHHHHHHHHHHG-GGCSEEEEECCC--TTSTTGGGGGSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCCEEEEeccC--CCCcccccccCHHHHHHHHHHHH
Confidence 566666666654 599999999865 43221111223344445555554
No 289
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=72.04 E-value=62 Score=29.91 Aligned_cols=65 Identities=20% Similarity=0.185 Sum_probs=36.8
Q ss_pred hHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHH-HCCCCCCCEEEecCCC----CccChhH
Q 038230 324 DMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAE-LSGIPAWRIIIDPGLG----FSKKAEH 398 (480)
Q Consensus 324 ~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~-~~Gi~~~~IilDPgiG----f~k~~~~ 398 (480)
+.++++++.|+++|++|.... . . +...+.+.+..+.+. +.|+ +|.+-|.-| ++.+.++
T Consensus 92 ~~i~~a~~lGa~~vv~h~g~~--~---------~---~~~~~~l~~l~~~a~~~~gv---~l~lEn~~~~~~~~~~~~~~ 154 (270)
T 3aam_A 92 DDLEKAALLGVEYVVVHPGSG--R---------P---ERVKEGALKALRLAGVRSRP---VLLVENTAGGGEKVGARFEE 154 (270)
T ss_dssp HHHHHHHHHTCCEEEECCCBS--C---------H---HHHHHHHHHHHHHHTCCSSS---EEEEECCCCCTTBSCCSHHH
T ss_pred HHHHHHHHcCCCEEEECCCCC--C---------H---HHHHHHHHHHHHhhcccCCC---EEEEecCCCCCCccCCCHHH
Confidence 456677777777777775321 0 0 233455566666666 6677 377766432 2335555
Q ss_pred HHHHHHh
Q 038230 399 NLDILLG 405 (480)
Q Consensus 399 ~~~~lr~ 405 (480)
-.++++.
T Consensus 155 ~~~l~~~ 161 (270)
T 3aam_A 155 LAWLVAD 161 (270)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 5555554
No 290
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=72.00 E-value=24 Score=34.28 Aligned_cols=138 Identities=17% Similarity=0.188 Sum_probs=71.1
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEeCCCCCC-CCCCCCCHHH-HHHHHHHHHHHHHcCCcCCCC-eEEEeCCCHHHHHHH
Q 038230 229 KFQSVEAAVSQVRLMISEGADMIDIGAQSTR-PMATKISAEK-ELERLIPVLEAVLTMPEMEGK-LVSVDTFYSKVASEA 305 (480)
Q Consensus 229 ~~~~~e~a~~~A~~~v~~GAdiIDIG~eStr-P~a~~v~~~e-E~~rl~~vi~~l~~~~~~~~~-pISIDT~~~~v~~aa 305 (480)
+..+++++++.++++.+.|+.-|-+-++.+. -|. +. ...++..+++.+.+. .++ .+.+.|.+|.
T Consensus 31 r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~-----~~~~~~~l~~Ll~~l~~~---~gi~~ir~~~~~p~----- 97 (304)
T 2qgq_A 31 RSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGI-----DLYRKQALPDLLRRLNSL---NGEFWIRVMYLHPD----- 97 (304)
T ss_dssp CBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTH-----HHHSSCCHHHHHHHHHTS---SSSCEEEECCCCGG-----
T ss_pred eeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCC-----CCCcHHHHHHHHHHHHhc---CCCcEEEEeeeecc-----
Confidence 4568999999999999999987765433211 110 00 012455566666654 133 3455443331
Q ss_pred HHcCCCEEecCCCCCCCchHHHHHHhcC--CCEEEEcCCC-CCCc---cccccccchhhHHHHHHHHHHHHHHHHHH--C
Q 038230 306 VGKGAHIVNDVSAGQLDPDMYKVVAGLK--VPYVAMHMRG-DPST---MQNEENLQYDDVCKQVASELYSKVRDAEL--S 377 (480)
Q Consensus 306 L~~G~~iINdVsg~~~d~~m~~l~~~~~--~~vVlmh~~g-~p~~---~~~~~~~~~~~v~~ev~~~l~~~i~~a~~--~ 377 (480)
..++++++..++++ +..+-+..+. .+.. |.+. +.. +.+.+.++.+.+ .
T Consensus 98 --------------~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~r~--~t~--------e~~~~~i~~l~~~~~ 153 (304)
T 2qgq_A 98 --------------HLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRT--KSS--------EELKKMLSSIRERFP 153 (304)
T ss_dssp --------------GCCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCC--SCH--------HHHHHHHHHHHHHCT
T ss_pred --------------cCCHHHHHHHHhCCCCccEEEEecccCCHHHHHHhCCC--CCH--------HHHHHHHHHHHhhCC
Confidence 11345555555555 4444333221 1111 1110 111 234456667766 5
Q ss_pred CCCCCCEEEecCCCC-ccChhHHHHHHHhc
Q 038230 378 GIPAWRIIIDPGLGF-SKKAEHNLDILLGL 406 (480)
Q Consensus 378 Gi~~~~IilDPgiGf-~k~~~~~~~~lr~l 406 (480)
|+ .+-.|=-+|| +.+.++-.++++.+
T Consensus 154 gi---~i~~~~IvG~PgEt~ed~~~t~~~l 180 (304)
T 2qgq_A 154 DA---VLRTSIIVGFPGETEEDFEELKQFV 180 (304)
T ss_dssp TC---EEEEEEEECCTTCCHHHHHHHHHHH
T ss_pred CC---EEEEEEEEeCCCCCHHHHHHHHHHH
Confidence 76 3667777787 66665544444444
No 291
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=71.97 E-value=80 Score=31.64 Aligned_cols=96 Identities=19% Similarity=0.088 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHH--
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEA-- 305 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aa-- 305 (480)
.++++..+.|++++++|-+.|.|-... -+.+.++ ..|+++++... .+++|.||.. +++.+.+.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~vKik~g~-------~~~~~~~----e~v~avR~a~G-~~~~l~vDan~~~~~~~a~~~~~ 211 (389)
T 2oz8_A 144 LDDDAFVSLFSHAASIGYSAFKIKVGH-------RDFDRDL----RRLELLKTCVP-AGSKVMIDPNEAWTSKEALTKLV 211 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCC-------SSHHHHH----HHHHHHHTTSC-TTCEEEEECTTCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCC-------CCHHHHH----HHHHHHHHhhC-CCCeEEEECCCCCCHHHHHHHHH
Confidence 478999999999999999999986421 1233333 44677777532 3789999953 44433222
Q ss_pred -H-H--cCCCEEecCCCCCCCchHHHHHHhc-CCCEEE
Q 038230 306 -V-G--KGAHIVNDVSAGQLDPDMYKVVAGL-KVPYVA 338 (480)
Q Consensus 306 -L-~--~G~~iINdVsg~~~d~~m~~l~~~~-~~~vVl 338 (480)
| + .|..+|-+--.....+.+..+.+.. +++++.
T Consensus 212 ~l~~~g~~i~~iEqP~~~~~~~~~~~l~~~~~~iPIa~ 249 (389)
T 2oz8_A 212 AIREAGHDLLWVEDPILRHDHDGLRTLRHAVTWTQINS 249 (389)
T ss_dssp HHHHTTCCCSEEESCBCTTCHHHHHHHHHHCCSSEEEE
T ss_pred HHHhcCCCceEEeCCCCCcCHHHHHHHHhhCCCCCEEe
Confidence 3 3 4677876543222125567777777 788776
No 292
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=71.87 E-value=31 Score=34.73 Aligned_cols=104 Identities=15% Similarity=0.093 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCC-------------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE----eC
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQS-------------TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV----DT 296 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eS-------------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI----DT 296 (480)
++-.+.|+...++|.|.|+|.+.- .|...-.-|.+...+.+..+|+++++... .+ ||+| +.
T Consensus 161 ~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg-~~-~v~vRls~~~ 238 (361)
T 3gka_A 161 AAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWS-AA-RVGVHLAPRG 238 (361)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHC-GG-GEEEEECTTC
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcC-CC-eEEEeccccc
Confidence 444566788889999999998742 12211123566677788889999987632 12 5555 21
Q ss_pred C-------C-----HHHHHHHHHcCCCEEecCCCCCCCchHHHHHHh-cCCCEEEEc
Q 038230 297 F-------Y-----SKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAG-LKVPYVAMH 340 (480)
Q Consensus 297 ~-------~-----~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~-~~~~vVlmh 340 (480)
+ + .+++++.-++|+++|. +++....++++..+++ .+.+||..-
T Consensus 239 ~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~-v~~~~~~~~~~~~ik~~~~iPvi~~G 294 (361)
T 3gka_A 239 DAHTMGDSDPAATFGHVARELGRRRIAFLF-ARESFGGDAIGQQLKAAFGGPFIVNE 294 (361)
T ss_dssp CSSSCCCSCHHHHHHHHHHHHHHTTCSEEE-EECCCSTTCCHHHHHHHHCSCEEEES
T ss_pred ccCCCCCCCcHHHHHHHHHHHHHcCCCEEE-ECCCCCCHHHHHHHHHHcCCCEEEeC
Confidence 1 1 2234444456999998 4433222344444444 578877653
No 293
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=71.84 E-value=21 Score=36.03 Aligned_cols=98 Identities=11% Similarity=0.123 Sum_probs=62.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-+.|.|-+.. + +.+.++++ |+++++... .+++|.||. ++++.+.+.++
T Consensus 161 ~~~e~~~~~a~~~~~~Gf~~vKik~g~--~-----~~~~~~e~----v~avR~avg-~d~~l~vDan~~~~~~~a~~~~~ 228 (393)
T 2og9_A 161 TPIDQLMVNASASIERGIGGIKLKVGQ--P-----DGALDIAR----VTAVRKHLG-DAVPLMVDANQQWDRPTAQRMCR 228 (393)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECCC--S-----CHHHHHHH----HHHHHHHHC-TTSCEEEECTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--C-----CHHHHHHH----HHHHHHHcC-CCCEEEEECCCCCCHHHHHHHHH
Confidence 378999999999999999999985421 1 23444444 455554311 378999995 35554433332
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEc
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMH 340 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh 340 (480)
.|.++|-+--.....+.+..+.+..++|+++-.
T Consensus 229 ~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE 265 (393)
T 2og9_A 229 IFEPFNLVWIEEPLDAYDHEGHAALALQFDTPIATGE 265 (393)
T ss_dssp HHGGGCCSCEECCSCTTCHHHHHHHHHHCSSCEEECT
T ss_pred HHHhhCCCEEECCCCcccHHHHHHHHHhCCCCEEeCC
Confidence 388888764332212567777778889988743
No 294
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=71.71 E-value=39 Score=33.61 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHHHH-cCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHHH
Q 038230 232 SVEAAVSQVRLMIS-EGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAVG 307 (480)
Q Consensus 232 ~~e~a~~~A~~~v~-~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL~ 307 (480)
++++..+.|+++++ +|-+.+.|.... + +.+++++++..+-+.+- .+++|.+|.. +++.+.+.++
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~--~-----~~~~~~e~v~avr~a~g-----~~~~l~vDan~~~~~~~a~~~~~ 209 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGA--R-----TPAQDLEHIRSIVKAVG-----DRASVRVDVNQGWDEQTASIWIP 209 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSS--S-----CHHHHHHHHHHHHHHHG-----GGCEEEEECTTCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCC--C-----ChHHHHHHHHHHHHhcC-----CCCEEEEECCCCCCHHHHHHHHH
Confidence 57889999999999 999999986421 1 23455555543333332 2688999953 4554433332
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.|.++|-+--.....+.+..+.++.+++++.
T Consensus 210 ~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~ipIa~ 244 (370)
T 1nu5_A 210 RLEEAGVELVEQPVPRANFGALRRLTEQNGVAILA 244 (370)
T ss_dssp HHHHHTCCEEECCSCTTCHHHHHHHHHHCSSEEEE
T ss_pred HHHhcCcceEeCCCCcccHHHHHHHHHhCCCCEEe
Confidence 4999997654322125677777788888876
No 295
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=71.53 E-value=38 Score=33.53 Aligned_cols=97 Identities=19% Similarity=0.248 Sum_probs=67.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCC-----CCC-CCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQ-----STR-PMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASE 304 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~e-----Str-P~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~a 304 (480)
.+.+++.+..+++.+.|++.|.+-.. ++. ++....+ .+++.+ +++..++. ++++.+=......++.
T Consensus 173 ~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~-~~~l~~---~~~~A~~~----g~~v~~H~~~~~~i~~ 244 (418)
T 2qs8_A 173 NGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFT-QEEVDA---VVSAAKDY----GMWVAVHAHGAEGMKR 244 (418)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSC-HHHHHH---HHHHHHHT----TCEEEEEECSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCC-HHHHHH---HHHHHHHc----CCEEEEEECCHHHHHH
Confidence 35677777777778889999987431 111 1222333 355554 45555655 8999999999999999
Q ss_pred HHHcCCCEEecCCCCCCCchHHHHHHhcCCCEE
Q 038230 305 AVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYV 337 (480)
Q Consensus 305 aL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vV 337 (480)
++++|++.|-.... .+++.++.+++.|+.++
T Consensus 245 ~~~~g~~~i~H~~~--~~~~~i~~l~~~gv~v~ 275 (418)
T 2qs8_A 245 AIKAGVDSIEHGTF--MDLEAMDLMIENGTYYV 275 (418)
T ss_dssp HHHHTCSEEEECTT--CCHHHHHHHHHHTCEEE
T ss_pred HHHcCCCEEEECCC--CCHHHHHHHHHCCCEEe
Confidence 99999998876654 25788888898887643
No 296
>3qvs_A MIPS, MYO-inositol-1-phosphate synthase (INO1); NAD binding rossmann fold, L-MYO-inositol 1-phosphate syntha isomerase; HET: NAD PG4; 1.70A {Archaeoglobus fulgidus} PDB: 1u1i_A* 3qvt_A* 3qvw_A* 3qvx_A* 3qw2_A*
Probab=71.41 E-value=9.2 Score=39.19 Aligned_cols=95 Identities=17% Similarity=0.135 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCC
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAE-KELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAH 311 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~-eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~ 311 (480)
.|.+.+..+.+.+ ..+|-|+..||.|..+..+.- +.++.+ .++|.+. +--| =+...--+.+|+++|+.
T Consensus 127 ve~ir~DIr~Fk~--d~vVVlw~asTE~~~~~~~~~~~t~~~l---~~ai~~~----~~ei--~spS~~YA~AAl~ag~~ 195 (392)
T 3qvs_A 127 VSRIEEDIKSFAD--DETVVINVASTEPLPNYSEEYHGSLEGF---ERMIDED----RKEY--ASASMLYAYAALKLGLP 195 (392)
T ss_dssp HHHHHHHHHHHCC--TTEEEEECSCCCCCCCCCHHHHSSHHHH---HHHHHTT----CGGG--CCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhc--CCEEEEECCCCCCCCCCCcccccCHHHH---HHHHhcC----Cccc--cChHHHHHHHHHHcCCC
Confidence 3444444445444 899999999999987643210 133333 4555653 1111 12333457789999999
Q ss_pred EEecCCC-CCCCchHHHHHHhcCCCEEE
Q 038230 312 IVNDVSA-GQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 312 iINdVsg-~~~d~~m~~l~~~~~~~vVl 338 (480)
.||-.-. ...+|.+.+++.+.|++++-
T Consensus 196 fvN~~P~~~a~~P~~~ela~~~g~pi~G 223 (392)
T 3qvs_A 196 YANFTPSPGSAIPALKELAEKKGVPHAG 223 (392)
T ss_dssp EEECSSSCTTCSHHHHHHHHHHTCEEEC
T ss_pred eeecCCccccCCHHHHHHHHHcCCCEec
Confidence 9997765 23469999999999999875
No 297
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=70.93 E-value=10 Score=37.37 Aligned_cols=78 Identities=15% Similarity=0.196 Sum_probs=53.3
Q ss_pred CCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe---CCCH--HH
Q 038230 227 GGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD---TFYS--KV 301 (480)
Q Consensus 227 gg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID---T~~~--~v 301 (480)
+|+ .+++.+++.++++.+.||+.|-+.= |- | +...+++.++ ++.+++.. .++||++= ++-- .-
T Consensus 151 ~~~-~~~~~~~~~~~~~~~~Ga~~i~l~D--T~-G---~~~P~~v~~l---v~~l~~~~--~~~~l~~H~Hnd~Gla~AN 218 (307)
T 1ydo_A 151 EKD-VPIEQVIRLSEALFEFGISELSLGD--TI-G---AANPAQVETV---LEALLARF--PANQIALHFHDTRGTALAN 218 (307)
T ss_dssp TBC-CCHHHHHHHHHHHHHHTCSCEEEEC--SS-C---CCCHHHHHHH---HHHHHTTS--CGGGEEEECBGGGSCHHHH
T ss_pred CCC-CCHHHHHHHHHHHHhcCCCEEEEcC--CC-C---CcCHHHHHHH---HHHHHHhC--CCCeEEEEECCCCchHHHH
Confidence 454 5899999999999999999998872 21 1 1122445544 56667653 25889984 3443 34
Q ss_pred HHHHHHcCCCEEecC
Q 038230 302 ASEAVGKGAHIVNDV 316 (480)
Q Consensus 302 ~~aaL~~G~~iINdV 316 (480)
..+|+++|++.|..-
T Consensus 219 ~laAv~aGa~~vd~t 233 (307)
T 1ydo_A 219 MVTALQMGITVFDGS 233 (307)
T ss_dssp HHHHHHHTCCEEEEB
T ss_pred HHHHHHhCCCEEEEc
Confidence 567888999999753
No 298
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=70.76 E-value=20 Score=36.01 Aligned_cols=58 Identities=22% Similarity=0.138 Sum_probs=38.2
Q ss_pred HHHHHHHHHHcCCCEEEeCCC---------CC----CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE
Q 038230 236 AVSQVRLMISEGADMIDIGAQ---------ST----RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV 294 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~e---------St----rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI 294 (480)
-.+.|+..+++|.|.|+|.+. |. |...-.-|.+.-.+-+..+|+++++... .+.||+|
T Consensus 160 f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg-~d~pV~v 230 (363)
T 3l5l_A 160 FVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWP-ENLPLTA 230 (363)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSC-TTSCEEE
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcC-CCceEEE
Confidence 345577778899999999974 21 2221233556667778899999998742 2455554
No 299
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=70.72 E-value=61 Score=30.92 Aligned_cols=113 Identities=19% Similarity=0.166 Sum_probs=61.4
Q ss_pred HHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC----------HHHH----HH
Q 038230 239 QVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY----------SKVA----SE 304 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~----------~~v~----~a 304 (480)
.+++.++.||+.||+=. ..+. -+.++-++.+..+.+..++. ++|+-+.++- ++.+ +.
T Consensus 97 ~ve~Ai~~Ga~~v~~~~---nig~--~~~~~~~~~~~~v~~~~~~~----~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~ 167 (263)
T 1w8s_A 97 SVEEAVSLGASAVGYTI---YPGS--GFEWKMFEELARIKRDAVKF----DLPLVVESFPRGGKVVNETAPEIVAYAARI 167 (263)
T ss_dssp CHHHHHHTTCSEEEEEE---CTTS--TTHHHHHHHHHHHHHHHHHH----TCCEEEEECCCSTTCCCTTCHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEE---ecCC--cCHHHHHHHHHHHHHHHHHc----CCeEEEEeeCCCCccccCCCHHHHHHHHHH
Confidence 45666789999999832 1111 12333344444444444443 6777676653 3444 34
Q ss_pred HHHcCCCEEecCCCCCCCch-HHHHHHhcCC-CEEEEcCCCCCC-ccccccccchhhHHHHHHHHHHHHHHHHHHCCCC
Q 038230 305 AVGKGAHIVNDVSAGQLDPD-MYKVVAGLKV-PYVAMHMRGDPS-TMQNEENLQYDDVCKQVASELYSKVRDAELSGIP 380 (480)
Q Consensus 305 aL~~G~~iINdVsg~~~d~~-m~~l~~~~~~-~vVlmh~~g~p~-~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~ 380 (480)
|.+.|+|+|--=+ ....+ +-.+.+..+. ||++. .|+.. +. +.+.+.+..+.++|..
T Consensus 168 a~~~GAD~vkt~~--~~~~e~~~~~~~~~~~~pV~as--GGi~~~~~----------------~~~l~~i~~~~~aGA~ 226 (263)
T 1w8s_A 168 ALELGADAMKIKY--TGDPKTFSWAVKVAGKVPVLMS--GGPKTKTE----------------EDFLKQVEGVLEAGAL 226 (263)
T ss_dssp HHHHTCSEEEEEC--CSSHHHHHHHHHHTTTSCEEEE--CCSCCSSH----------------HHHHHHHHHHHHTTCC
T ss_pred HHHcCCCEEEEcC--CCCHHHHHHHHHhCCCCeEEEE--eCCCCCCH----------------HHHHHHHHHHHHcCCe
Confidence 5667999985222 22334 4444434455 87654 35532 21 3455667777788884
No 300
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=70.63 E-value=23 Score=35.91 Aligned_cols=97 Identities=14% Similarity=0.142 Sum_probs=62.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-+.|.+-... + +.+.+.+++ +++++... .+++|.||. ++++.+.+.++
T Consensus 174 ~~~e~~~~~a~~~~~~Gf~~vKik~g~--~-----~~~~d~e~v----~avR~avG-~d~~l~vDan~~~~~~~ai~~~~ 241 (398)
T 2pp0_A 174 TPLDQVLKNVVISRENGIGGIKLKVGQ--P-----NCAEDIRRL----TAVREALG-DEFPLMVDANQQWDRETAIRMGR 241 (398)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCC--S-----CHHHHHHHH----HHHHHHHC-SSSCEEEECTTCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCC--C-----CHHHHHHHH----HHHHHHcC-CCCeEEEECCCCCCHHHHHHHHH
Confidence 378999999999999999999985421 1 234455554 44444311 378999995 35554433332
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
+|.++|-+--.....+.+..+.++.+++++.-
T Consensus 242 ~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~d 277 (398)
T 2pp0_A 242 KMEQFNLIWIEEPLDAYDIEGHAQLAAALDTPIATG 277 (398)
T ss_dssp HHGGGTCSCEECCSCTTCHHHHHHHHHHCSSCEEEC
T ss_pred HHHHcCCceeeCCCChhhHHHHHHHHhhCCCCEEec
Confidence 38888876543221256777777888998873
No 301
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=70.63 E-value=24 Score=34.34 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=26.7
Q ss_pred EEEEEecCC--CCCCCCC--ccCCHHHHHHHHHHHHHcCCCEEEeCC
Q 038230 213 VMGILNLTP--DSFSDGG--KFQSVEAAVSQVRLMISEGADMIDIGA 255 (480)
Q Consensus 213 imGIlN~tp--DSFsdgg--~~~~~e~a~~~A~~~v~~GAdiIDIG~ 255 (480)
=||+...+. +||...| .-.+.++.++.+.++ .|.+.|++..
T Consensus 11 ~~~~w~~~~~~~~f~~~g~~~~~~~~e~l~~aa~~--~G~~~VEl~~ 55 (333)
T 3ktc_A 11 GAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEV--GELSYVDLPY 55 (333)
T ss_dssp EEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHH--SSEEEEEEEE
T ss_pred eeeeeeeecccccccCCCCCCCCCHHHHHHHHHHh--CCCCEEEecC
Confidence 344444444 7888765 335777777666653 4999999964
No 302
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=70.58 E-value=16 Score=35.69 Aligned_cols=76 Identities=12% Similarity=0.035 Sum_probs=52.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CC--HHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FY--SKVASE 304 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~--~~v~~a 304 (480)
..+++.+++.++++.+.|||.|-|. .|- |. ..+ ++.. ..++.|++.. .++||++=+ +- ..-+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~G~d~i~l~--DT~-G~--~~P-~~~~---~lv~~l~~~~--~~~~l~~H~Hn~~Gla~An~la 223 (302)
T 2ftp_A 155 DVDPRQVAWVARELQQMGCYEVSLG--DTI-GV--GTA-GATR---RLIEAVASEV--PRERLAGHFHDTYGQALANIYA 223 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEE--ESS-SC--CCH-HHHH---HHHHHHTTTS--CGGGEEEEEBCTTSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEe--CCC-CC--cCH-HHHH---HHHHHHHHhC--CCCeEEEEeCCCccHHHHHHHH
Confidence 4789999999999999999999987 122 11 122 3333 3466667653 258899843 43 344578
Q ss_pred HHHcCCCEEecC
Q 038230 305 AVGKGAHIVNDV 316 (480)
Q Consensus 305 aL~~G~~iINdV 316 (480)
|+++|++.||.-
T Consensus 224 Av~aGa~~vd~t 235 (302)
T 2ftp_A 224 SLLEGIAVFDSS 235 (302)
T ss_dssp HHHTTCCEEEEB
T ss_pred HHHhCCCEEEec
Confidence 899999999853
No 303
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=70.47 E-value=63 Score=31.99 Aligned_cols=145 Identities=16% Similarity=0.092 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-+.+-+-.. | +++.+++. ++++... .+++|.||.. +++. .+.++
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~vKik~~---~-------~~~~e~v~----avr~~~g-~~~~l~vDan~~~~~~~-~~~~~ 203 (368)
T 1sjd_A 140 DTIPQLLDVVGGYLDEGYVRIKLKIE---P-------GWDVEPVR----AVRERFG-DDVLLQVDANTAYTLGD-APQLA 203 (368)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECB---T-------TBSHHHHH----HHHHHHC-TTSEEEEECTTCCCGGG-HHHHH
T ss_pred CCHHHHHHHHHHHHHhCccEEEEecC---c-------hhHHHHHH----HHHHhcC-CCceEEEeccCCCCHHH-HHHHH
Confidence 37888999999999999999998641 2 23345543 3333211 2688999943 3333 33332
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCC
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWR 383 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~ 383 (480)
.|.++|-+--.....+.+..+.++.+++++.-.+- .+ .+.++.+.+.|-- +=
T Consensus 204 ~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~---~~--------------------~~~~~~~i~~~~~-d~ 259 (368)
T 1sjd_A 204 RLDPFGLLLIEQPLEEEDVLGHAELARRIQTPICLDESI---VS--------------------ARAAADAIKLGAV-QI 259 (368)
T ss_dssp TTGGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEESTTC---CS--------------------HHHHHHHHHTTCC-SE
T ss_pred HHHhcCCCeEeCCCChhhHHHHHHHHHhCCCCEEECCCc---CC--------------------HHHHHHHHHcCCC-CE
Confidence 48888876433221255667777778888762221 00 0122233334432 25
Q ss_pred EEEecCCCCccChhHHHHHHHhcccCCCcEEEee
Q 038230 384 IIIDPGLGFSKKAEHNLDILLGLAASHAPILIGP 417 (480)
Q Consensus 384 IilDPgiGf~k~~~~~~~~lr~l~~~g~Pil~G~ 417 (480)
|.+||.- .-...+.+++.+..+..|+++++|+
T Consensus 260 v~ik~~~--~GGit~~~~i~~~A~~~g~~~~~~~ 291 (368)
T 1sjd_A 260 VNIKPGR--VGGYLEARRVHDVCAAHGIPVWCGG 291 (368)
T ss_dssp EEECTTT--TTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred EEecccc--cCCHHHHHHHHHHHHHcCCcEEeCC
Confidence 7788853 0112233444444355789987775
No 304
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=70.31 E-value=10 Score=38.37 Aligned_cols=71 Identities=23% Similarity=0.238 Sum_probs=45.7
Q ss_pred HHHHHHHcCCCEEEeCCCCCCCCCC---------CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHH
Q 038230 239 QVRLMISEGADMIDIGAQSTRPMAT---------KISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVG 307 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eStrP~a~---------~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~ 307 (480)
.|+++.+.|||+|.+|.. ||+. ..+ .+..+..+.+...+. ++||--|- .+++-+.+|+.
T Consensus 158 ~A~~l~~aGaD~I~VG~~---~Gs~~~tr~~~g~g~p---~~~~i~~v~~~~~~~----~iPVIA~GGI~~~~di~kala 227 (361)
T 3khj_A 158 ATKELIENGADGIKVGIG---PGSICTTRIVAGVGVP---QITAIEKCSSVASKF----GIPIIADGGIRYSGDIGKALA 227 (361)
T ss_dssp HHHHHHHTTCSEEEECSS---CCTTCCHHHHTCBCCC---HHHHHHHHHHHHHHH----TCCEEEESCCCSHHHHHHHHH
T ss_pred HHHHHHHcCcCEEEEecC---CCcCCCcccccCCCCC---cHHHHHHHHHHHhhc----CCeEEEECCCCCHHHHHHHHH
Confidence 567888999999999743 2221 012 233333333333332 67888764 68999999999
Q ss_pred cCCCEEecCCCC
Q 038230 308 KGAHIVNDVSAG 319 (480)
Q Consensus 308 ~G~~iINdVsg~ 319 (480)
+||+.+---+.+
T Consensus 228 ~GAd~V~vGs~~ 239 (361)
T 3khj_A 228 VGASSVMIGSIL 239 (361)
T ss_dssp HTCSEEEESTTT
T ss_pred cCCCEEEEChhh
Confidence 999988655543
No 305
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=70.21 E-value=6.1 Score=39.40 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=41.1
Q ss_pred HHHcCCCEEEeCCCCCCCCCCCCCHH--HHHHHHHHHHHHHHcCCcCCCCeEEEe---C-CCHHHHHHHHHcCCCEEec
Q 038230 243 MISEGADMIDIGAQSTRPMATKISAE--KELERLIPVLEAVLTMPEMEGKLVSVD---T-FYSKVASEAVGKGAHIVND 315 (480)
Q Consensus 243 ~v~~GAdiIDIG~eStrP~a~~v~~~--eE~~rl~~vi~~l~~~~~~~~~pISID---T-~~~~v~~aaL~~G~~iINd 315 (480)
..+.|||.|+|+... |. +.+++. .++..+...|+.+++. .++||.+= . .+++.++.+.++|+|.|--
T Consensus 136 ~~~~gad~i~i~~~~--~~-~~~~~~~~~~~~~~~~~i~~vr~~---~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v 208 (349)
T 1p0k_A 136 VEMIGANALQIHLNV--IQ-EIVMPEGDRSFSGALKRIEQICSR---VSVPVIVKEVGFGMSKASAGKLYEAGAAAVDI 208 (349)
T ss_dssp HHHTTCSEEEEEECT--TT-TC--------CTTHHHHHHHHHHH---CSSCEEEEEESSCCCHHHHHHHHHHTCSEEEE
T ss_pred HHhcCCCeEEecccc--hh-hhcCCCCCcchHHHHHHHHHHHHH---cCCCEEEEecCCCCCHHHHHHHHHcCCCEEEE
Confidence 335799999998643 21 112211 1111244566777765 37888873 2 6799999999999997763
No 306
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=70.20 E-value=7.2 Score=41.72 Aligned_cols=21 Identities=33% Similarity=0.566 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCCEEEeCCC
Q 038230 236 AVSQVRLMISEGADMIDIGAQ 256 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~e 256 (480)
+++.|++++++|||.|.||..
T Consensus 349 ~~~~a~~~l~aGad~V~igt~ 369 (555)
T 1jvn_A 349 ALEVASLYFRSGADKVSIGTD 369 (555)
T ss_dssp HHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHHHHHcCCCEEEECCH
Confidence 677899999999999999953
No 307
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=70.10 E-value=12 Score=36.68 Aligned_cols=119 Identities=18% Similarity=0.160 Sum_probs=62.8
Q ss_pred CcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEE--eCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcC
Q 038230 210 KTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMID--IGAQSTRPMATKISAEKELERLIPVLEAVLTMPEM 287 (480)
Q Consensus 210 ~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiID--IG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~ 287 (480)
.++|-.+++ |--|.. +.+.-+..+++.+++|||-|| |+...-.- .+++.+..-|+.+++....
T Consensus 109 ~V~V~tVig-----FP~G~~--~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~--------g~~~~v~~eI~~V~~a~~~ 173 (288)
T 3oa3_A 109 QVGVTCVIG-----FHEGTY--STDQKVSEAKRAMQNGASELDMVMNYPWLSE--------KRYTDVFQDIRAVRLAAKD 173 (288)
T ss_dssp SCEEEEEES-----TTTSCS--CHHHHHHHHHHHHHTTCSEEEEECCHHHHHT--------TCHHHHHHHHHHHHHHTTT
T ss_pred CCeEEEEeC-----CCCCCC--cHHHHHHHHHHHHHcCCCEEEEEeehhhhcC--------CcHHHHHHHHHHHHHHhcC
Confidence 356666655 433432 346678889999999999999 44321000 1133333333444432211
Q ss_pred CCCeEEEeC--CCHHH----HHHHHHcCCCEEecCCCCCC------C-chHHHHHHhcCCCEEEEcCCC
Q 038230 288 EGKLVSVDT--FYSKV----ASEAVGKGAHIVNDVSAGQL------D-PDMYKVVAGLKVPYVAMHMRG 343 (480)
Q Consensus 288 ~~~pISIDT--~~~~v----~~aaL~~G~~iINdVsg~~~------d-~~m~~l~~~~~~~vVlmh~~g 343 (480)
.-+.+-|.| ...+. .+.|.++|+|+|---+|+.. + .-|.++++.++..+=+-...|
T Consensus 174 ~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGG 242 (288)
T 3oa3_A 174 AILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKASGG 242 (288)
T ss_dssp SEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESS
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCC
Confidence 124555555 33444 34455679999987776431 1 235666654344333333444
No 308
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=70.04 E-value=75 Score=31.82 Aligned_cols=107 Identities=10% Similarity=0.052 Sum_probs=64.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCC---CC--CCC-CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQST---RP--MAT-KISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKV 301 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eSt---rP--~a~-~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v 301 (480)
.++++..+.|++++++|-+.+.|-..-. .+ +.. .-+.+..++.....|+++++... .+++|.||.. +++.
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G-~d~~l~vD~n~~~~~~~ 214 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAG-PEIELMVDLSGGLTTDE 214 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHC-TTSEEEEECTTCSCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcC-CCCEEEEECCCCCCHHH
Confidence 4788999999999999999999753200 00 000 00112334445555666665321 3789999953 5544
Q ss_pred HHHHHH----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 302 ASEAVG----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 302 ~~aaL~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+.+.++ .|.++|-+--.....+.+..+.+..+++++.
T Consensus 215 a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~ 255 (392)
T 2poz_A 215 TIRFCRKIGELDICFVEEPCDPFDNGALKVISEQIPLPIAV 255 (392)
T ss_dssp HHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEe
Confidence 433332 3888887654322125677777778888886
No 309
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=70.00 E-value=8.9 Score=40.36 Aligned_cols=74 Identities=20% Similarity=0.206 Sum_probs=47.8
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCH------HHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcC
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISA------EKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKG 309 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~------~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G 309 (480)
+.|+.+.++|||.|.+|.. ||+..... ...+..+..+.+.+++. ++||--| -.+++-+.+|+.+|
T Consensus 282 e~a~~l~~aGaD~I~vg~g---~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~----~iPVIa~GGI~~~~di~kal~~G 354 (490)
T 4avf_A 282 EAAKALAEAGADAVKVGIG---PGSICTTRIVAGVGVPQISAIANVAAALEGT----GVPLIADGGIRFSGDLAKAMVAG 354 (490)
T ss_dssp HHHHHHHHTTCSEEEECSS---CSTTCHHHHHTCBCCCHHHHHHHHHHHHTTT----TCCEEEESCCCSHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECCC---CCcCCCccccCCCCccHHHHHHHHHHHhccC----CCcEEEeCCCCCHHHHHHHHHcC
Confidence 3578889999999999752 33211000 01244445555555443 7888885 57899999999999
Q ss_pred CCEEecCCC
Q 038230 310 AHIVNDVSA 318 (480)
Q Consensus 310 ~~iINdVsg 318 (480)
|+.+-=-+.
T Consensus 355 Ad~V~vGs~ 363 (490)
T 4avf_A 355 AYCVMMGSM 363 (490)
T ss_dssp CSEEEECTT
T ss_pred CCeeeecHH
Confidence 997754443
No 310
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=69.83 E-value=30 Score=32.52 Aligned_cols=150 Identities=11% Similarity=0.094 Sum_probs=85.2
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC----CCHHHHHH
Q 038230 229 KFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT----FYSKVASE 304 (480)
Q Consensus 229 ~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT----~~~~v~~a 304 (480)
...+.+++++.+. +.|.+.|++... .| +++++. +.+.+. ++.++.=. .+++.-++
T Consensus 29 ~~~~~~~~l~~~~---~~G~~~vEl~~~--~~---------~~~~~~---~~l~~~----gl~~~~~~~~~~~~~~~~~~ 87 (301)
T 3cny_A 29 KDNNLQQLLSDIV---VAGFQGTEVGGF--FP---------GPEKLN---YELKLR----NLEIAGQWFSSYIIRDGIEK 87 (301)
T ss_dssp TTCCHHHHHHHHH---HHTCCEECCCTT--CC---------CHHHHH---HHHHHT----TCEECEEEEEECHHHHHHHH
T ss_pred cCCCHHHHHHHHH---HhCCCEEEecCC--CC---------CHHHHH---HHHHHC----CCeEEEEeccCCCChhhHHH
Confidence 3467787777665 559999999831 11 233333 233443 44433211 11222222
Q ss_pred HHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCC-----CCCCc-cccccccchhhHHHHHHHHHHHHHHHHHHCC
Q 038230 305 AVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMR-----GDPST-MQNEENLQYDDVCKQVASELYSKVRDAELSG 378 (480)
Q Consensus 305 aL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~-----g~p~~-~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~G 378 (480)
+++ .-.+.+++|++.|+++|++|.. |.... ...+.....++..+...+.+.+..+.|.++|
T Consensus 88 ~~~-------------~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~g 154 (301)
T 3cny_A 88 ASE-------------AFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYG 154 (301)
T ss_dssp HHH-------------HHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHH-------------HHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 221 1256889999999999988852 32110 0000000023445667788889999999999
Q ss_pred CCCCCEEEecCCC-CccChhHHHHHHHhcccCCCcEEE
Q 038230 379 IPAWRIIIDPGLG-FSKKAEHNLDILLGLAASHAPILI 415 (480)
Q Consensus 379 i~~~~IilDPgiG-f~k~~~~~~~~lr~l~~~g~Pil~ 415 (480)
| +|.+-|.-+ |..+..+..++++.+..+.+-+++
T Consensus 155 v---~l~lE~~~~~~~~~~~~~~~l~~~~~~~~vg~~~ 189 (301)
T 3cny_A 155 L---KVAYHHHMGTGIQTKEETDRLMANTDPKLVGLLY 189 (301)
T ss_dssp C---EEEEECCTTSSSCSHHHHHHHHHTSCTTTCEEEE
T ss_pred C---EEEEecCCCcccCCHHHHHHHHHhCCccceeEEe
Confidence 9 499998654 456777777777765323344443
No 311
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=69.79 E-value=32 Score=34.05 Aligned_cols=97 Identities=12% Similarity=0.104 Sum_probs=62.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-+.|.|.+.. + +.+...++ ++++++... .+++|.+|.. +++.+.+.++
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~--~-----~~~~~~e~----v~avr~a~g-~~~~l~vDan~~~~~~~a~~~~~ 210 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGY--P-----ALDQDLAV----VRSIRQAVG-DDFGIMVDYNQSLDVPAAIKRSQ 210 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC--S-----SHHHHHHH----HHHHHHHHC-SSSEEEEECTTCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--C-----CHHHHHHH----HHHHHHHhC-CCCEEEEECCCCCCHHHHHHHHH
Confidence 467889999999999999999996421 1 23444444 444444321 2789999953 4544433322
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
+|.++|-+-......+.+..+.+..++|++.-
T Consensus 211 ~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPI~~d 246 (359)
T 1mdl_A 211 ALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMG 246 (359)
T ss_dssp HHHHHTCSCEECCSCTTCHHHHHHHHHTCSSCEEEC
T ss_pred HHHHhCCCeEECCCChhhHHHHHHHHHhCCCCEEeC
Confidence 49999876543221255677777788888863
No 312
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=69.56 E-value=15 Score=37.06 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=59.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE-EeCCCHHHHHHHHHcC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS-VDTFYSKVASEAVGKG 309 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS-IDT~~~~v~~aaL~~G 309 (480)
.+.+++++.|+.+.+.|+|+|++........ .... + ..++.+++. .++||. .-..+++.++++|+.|
T Consensus 248 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~~~~----~----~~~~~v~~~---~~iPvi~~Ggit~~~a~~~l~~g 315 (364)
T 1vyr_A 248 NEEADALYLIEELAKRGIAYLHMSETDLAGG-KPYS----E----AFRQKVRER---FHGVIIGAGAYTAEKAEDLIGKG 315 (364)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCBTTBC-CCCC----H----HHHHHHHHH---CCSEEEEESSCCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCcccCC-Cccc----H----HHHHHHHHH---CCCCEEEECCcCHHHHHHHHHCC
Confidence 4678899999999999999999975321111 1111 1 134445554 256654 3445799999999997
Q ss_pred -CCEEecCCCCCCCchHHHHHHh
Q 038230 310 -AHIVNDVSAGQLDPDMYKVVAG 331 (480)
Q Consensus 310 -~~iINdVsg~~~d~~m~~l~~~ 331 (480)
+|+|---++.-.+|.+..-+++
T Consensus 316 ~aD~V~~gR~~l~~P~~~~~~~~ 338 (364)
T 1vyr_A 316 LIDAVAFGRDYIANPDLVARLQK 338 (364)
T ss_dssp SCSEEEESHHHHHCTTHHHHHHH
T ss_pred CccEEEECHHHHhChhHHHHHHc
Confidence 9999766554446777766664
No 313
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=69.52 E-value=36 Score=34.29 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=61.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-+.+.|-... -+.+++.+++..+-+.+- .+++|.||. ++++.+.+.++
T Consensus 164 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-------~~~~~~~e~v~avr~a~g-----~~~~l~vDan~~~~~~~a~~~~~ 231 (392)
T 1tzz_A 164 KGLSMLRGEMRGYLDRGYNVVKMKIGG-------APIEEDRMRIEAVLEEIG-----KDAQLAVDANGRFNLETGIAYAK 231 (392)
T ss_dssp -CHHHHHHHHHHHHTTTCSEEEEECSS-------SCHHHHHHHHHHHHHHHT-----TTCEEEEECTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCC-------CCHHHHHHHHHHHHHhcC-----CCCeEEEECCCCCCHHHHHHHHH
Confidence 378899999999999999999986421 124455555543333331 278999994 45555433333
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.|.++|-+--.....+.+..+.++.+++++.
T Consensus 232 ~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~ 266 (392)
T 1tzz_A 232 MLRDYPLFWYEEVGDPLDYALQAALAEFYPGPMAT 266 (392)
T ss_dssp HHTTSCCSEEECCSCTTCHHHHHHHTTTCCSCEEE
T ss_pred HHHHcCCCeecCCCChhhHHHHHHHHhhCCCCEEE
Confidence 3888987654322125566776777888886
No 314
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=69.42 E-value=6.7 Score=39.07 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~ 297 (480)
.+++++.+.|.+..++||.|+=+=+-....|... -+.+++..+++.|++. +++.|-+=|-
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps----~d~~~y~e~i~~IR~~---~d~iI~~TTg 88 (314)
T 3lot_A 29 VTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPT----TDVEVFRYICREIKKQ---SDVVINVTTG 88 (314)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEE----CCHHHHHHHHHHHHHH---CCCEEEECSS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcC----CCHHHHHHHHHHHHhc---CCeEEEeCCC
Confidence 6899999999999999999999876321112211 2355677778888875 4788877554
No 315
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=69.21 E-value=15 Score=39.78 Aligned_cols=80 Identities=16% Similarity=0.118 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCC-------------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-----e
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQS-------------TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-----D 295 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eS-------------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-----D 295 (480)
++..+.|+...++|.|.|+|.+.- .|...-.-|.+...+.+..+++++++... .+.||++ |
T Consensus 141 ~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG-~~~~v~vrls~~~ 219 (671)
T 1ps9_A 141 DNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVG-NDFIIIYRLSMLD 219 (671)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC-SSSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcC-CCceEEEEECccc
Confidence 344567788889999999997632 12211123456678888899999987532 2667766 3
Q ss_pred C----CCH----HHHHHHHHcCCCEEe
Q 038230 296 T----FYS----KVASEAVGKGAHIVN 314 (480)
Q Consensus 296 T----~~~----~v~~aaL~~G~~iIN 314 (480)
. +.. +.+++.-++|+++|+
T Consensus 220 ~~~~g~~~~~~~~~a~~l~~~g~d~i~ 246 (671)
T 1ps9_A 220 LVEDGGTFAETVELAQAIEAAGATIIN 246 (671)
T ss_dssp CSTTCCCHHHHHHHHHHHHHHTCSEEE
T ss_pred cCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 2 233 334444456999996
No 316
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=69.15 E-value=55 Score=32.19 Aligned_cols=93 Identities=22% Similarity=0.235 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHHH-
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAVG- 307 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL~- 307 (480)
++++..+.|++++++|-+.+-+-... +.+++++++ +++++.. .+++|.||.. +++.+.+.++
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~--------~~~~d~~~v----~avr~~g--~~~~l~vDan~~~~~~~a~~~~~~ 204 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGE--------NLKEDIEAV----EEIAKVT--RGAKYIVDANMGYTQKEAVEFARA 204 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS--------CHHHHHHHH----HHHHHHS--TTCEEEEECTTCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecC--------CHHHHHHHH----HHHHhhC--CCCeEEEECCCCCCHHHHHHHHHH
Confidence 67888999999999999999986421 345556554 4445431 4799999953 4554433332
Q ss_pred ---cCCC--EEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ---KGAH--IVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ---~G~~--iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.|.+ +|-+--.....+.+..+.++.++|++.
T Consensus 205 l~~~~i~~~~iE~P~~~~~~~~~~~l~~~~~ipia~ 240 (345)
T 2zad_A 205 VYQKGIDIAVYEQPVRREDIEGLKFVRFHSPFPVAA 240 (345)
T ss_dssp HHHTTCCCSEEECCSCTTCHHHHHHHHHHSSSCEEE
T ss_pred HHhcCCCeeeeeCCCCcccHHHHHHHHHhCCCCEEE
Confidence 4888 988654322125677777788888887
No 317
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=69.07 E-value=19 Score=36.80 Aligned_cols=107 Identities=8% Similarity=0.005 Sum_probs=66.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHH-
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPM-ATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEA- 305 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~-a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aa- 305 (480)
.++++..++|++++++|-..+-+-......+ .......+++++-...++++++... .+++|.+|.. +++.+.+.
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G-~d~~l~vDaN~~~~~~~A~~~~ 221 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVG-SKADLLFGTHGQMVPSSAIRLA 221 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHT-TSSEEEECCCSCBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhC-CCCeEEEECCCCCCHHHHHHHH
Confidence 5889999999999999999998853211000 0011122345555556666766432 3789999964 44444332
Q ss_pred --HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 306 --VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 306 --L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
|+ .|..+|-.-......+.+..+.+..++|++.
T Consensus 222 ~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~ 257 (412)
T 4e4u_A 222 KRLEKYDPLWFEEPVPPGQEEAIAQVAKHTSIPIAT 257 (412)
T ss_dssp HHHGGGCCSEEECCSCSSCHHHHHHHHHTCSSCEEE
T ss_pred HHhhhcCCcEEECCCChhhHHHHHHHHhhCCCCEEe
Confidence 33 3889997654322125677777788888886
No 318
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=68.96 E-value=14 Score=36.55 Aligned_cols=57 Identities=26% Similarity=0.293 Sum_probs=42.6
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEe
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iIN 314 (480)
+.++...+.|+|+|.+++.. | . ++++.+++. ++|+.+....++.++.+.+.|+|.|.
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~--p-------~-------~~i~~l~~~----g~~v~~~v~~~~~a~~~~~~GaD~i~ 135 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGN--P-------S-------KYMERFHEA----GIIVIPVVPSVALAKRMEKIGADAVI 135 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSC--G-------G-------GTHHHHHHT----TCEEEEEESSHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHCCCCEEEECCCC--h-------H-------HHHHHHHHc----CCeEEEEeCCHHHHHHHHHcCCCEEE
Confidence 45566678999999999742 2 1 134555654 77888888889999999999999776
No 319
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=68.90 E-value=99 Score=30.96 Aligned_cols=96 Identities=11% Similarity=0.185 Sum_probs=63.8
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHH-
Q 038230 231 QSVEAAVSQVRLMISE-GADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEA- 305 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~-GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aa- 305 (480)
.++++.+++|++++++ |-..+-+-... -+.+++++++ +++++... .+++|.+|. ++++.+.+.
T Consensus 147 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~-------~~~~~d~~~v----~avR~a~g-~~~~l~vDan~~~~~~~A~~~~ 214 (383)
T 3i4k_A 147 LPLDVAVAEIEERIEEFGNRSFKLKMGA-------GDPAEDTRRV----AELAREVG-DRVSLRIDINARWDRRTALHYL 214 (383)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCS-------SCHHHHHHHH----HHHHHTTT-TTSEEEEECTTCSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCcEEEEeeCC-------CCHHHHHHHH----HHHHHHcC-CCCEEEEECCCCCCHHHHHHHH
Confidence 3678999999999998 99998875321 1355666664 56666532 368999994 455544332
Q ss_pred --HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 306 --VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 306 --L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
|+ .|..+|-+--.....+.+..+.+..++|+++
T Consensus 215 ~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~ 250 (383)
T 3i4k_A 215 PILAEAGVELFEQPTPADDLETLREITRRTNVSVMA 250 (383)
T ss_dssp HHHHHTTCCEEESCSCTTCHHHHHHHHHHHCCEEEE
T ss_pred HHHHhcCCCEEECCCChhhHHHHHHHHhhCCCCEEe
Confidence 22 4899997654322125677777788888886
No 320
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=68.67 E-value=15 Score=36.69 Aligned_cols=95 Identities=16% Similarity=0.195 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe---CCCHHHHHHH--
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD---TFYSKVASEA-- 305 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID---T~~~~v~~aa-- 305 (480)
.++++.+++|+++++.|-..+.+-.. .+.+++++++..+-+.+- .+++|.+| .++++.+.+.
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G--------~~~~~d~~~v~avR~~~g-----~~~~l~vDan~~~~~~~a~~~~~ 205 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLC--------GDEEQDFERLRRLHETLA-----GRAVVRVDPNQSYDRDGLLRLDR 205 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECC--------SCHHHHHHHHHHHHHHHT-----TSSEEEEECTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeC--------CCHHHHHHHHHHHHHHhC-----CCCEEEEeCCCCCCHHHHHHHHH
Confidence 47899999999999999999998642 145677777644433332 37899999 4556554433
Q ss_pred -HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 306 -VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 306 -L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
|+ .|..+|-+-......+.+..+.++.++|+++
T Consensus 206 ~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~ 240 (356)
T 3ro6_B 206 LVQELGIEFIEQPFPAGRTDWLRALPKAIRRRIAA 240 (356)
T ss_dssp HHHHTTCCCEECCSCTTCHHHHHTSCHHHHHTEEE
T ss_pred HHHhcCCCEEECCCCCCcHHHHHHHHhcCCCCEEe
Confidence 32 4888887543322114455555666788776
No 321
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=68.61 E-value=22 Score=34.61 Aligned_cols=78 Identities=21% Similarity=0.170 Sum_probs=52.9
Q ss_pred CCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe---CCCHH--
Q 038230 226 DGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD---TFYSK-- 300 (480)
Q Consensus 226 dgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID---T~~~~-- 300 (480)
|.|+ .+++.+++.++.+.+.||+.|-+.= |- | ..+ .++..++ ++.+++.. .++||++= ++--.
T Consensus 149 ~~~~-~~~~~~~~~~~~~~~~Ga~~i~l~D--T~-G--~~~-P~~~~~l---v~~l~~~~--~~~~i~~H~Hn~~Gla~A 216 (298)
T 2cw6_A 149 YEGK-ISPAKVAEVTKKFYSMGCYEISLGD--TI-G--VGT-PGIMKDM---LSAVMQEV--PLAALAVHCHDTYGQALA 216 (298)
T ss_dssp TTBS-CCHHHHHHHHHHHHHTTCSEEEEEE--TT-S--CCC-HHHHHHH---HHHHHHHS--CGGGEEEEEBCTTSCHHH
T ss_pred cCCC-CCHHHHHHHHHHHHHcCCCEEEecC--CC-C--CcC-HHHHHHH---HHHHHHhC--CCCeEEEEECCCCchHHH
Confidence 3455 5899999999999999999998872 11 1 122 2555554 44555442 25789884 45443
Q ss_pred HHHHHHHcCCCEEec
Q 038230 301 VASEAVGKGAHIVND 315 (480)
Q Consensus 301 v~~aaL~~G~~iINd 315 (480)
-..+|+++|++.|..
T Consensus 217 n~laA~~aGa~~vd~ 231 (298)
T 2cw6_A 217 NTLMALQMGVSVVDS 231 (298)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHhCCCEEEe
Confidence 447889999999985
No 322
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=68.60 E-value=13 Score=37.76 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCC--CCCCCCCCCCHHHHHH-HHHHHHHHHHcCCcCCCCeEEEe-C---CCHHHHHH
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQ--STRPMATKISAEKELE-RLIPVLEAVLTMPEMEGKLVSVD-T---FYSKVASE 304 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~e--StrP~a~~v~~~eE~~-rl~~vi~~l~~~~~~~~~pISID-T---~~~~v~~a 304 (480)
+++. .++|.+++++||..|+++.. ...|..+ .++. .....|+.+++. .++||.+- + ..++.++.
T Consensus 136 ~~~~-~~~av~~~~a~al~Ihln~~~~~~~p~g~-----~~~~~~~~~~i~~i~~~---~~vPVivK~vG~g~s~~~A~~ 206 (368)
T 3vkj_A 136 GLKE-FQDAIQMIEADAIAVHLNPAQEVFQPEGE-----PEYQIYALEKLRDISKE---LSVPIIVKESGNGISMETAKL 206 (368)
T ss_dssp CHHH-HHHHHHHTTCSEEEEECCHHHHHHSSSCC-----CBCBTHHHHHHHHHHTT---CSSCEEEECSSSCCCHHHHHH
T ss_pred CHHH-HHHHHHHhcCCCeEEEecchhhhhCCCCC-----chhhHHHHHHHHHHHHH---cCCCEEEEeCCCCCCHHHHHH
Confidence 3444 45566666899999998731 0001100 0111 244567777776 48999997 3 57999999
Q ss_pred HHHcCCCEEecCCC
Q 038230 305 AVGKGAHIVNDVSA 318 (480)
Q Consensus 305 aL~~G~~iINdVsg 318 (480)
+.++|++.|. |++
T Consensus 207 l~~aGad~I~-V~g 219 (368)
T 3vkj_A 207 LYSYGIKNFD-TSG 219 (368)
T ss_dssp HHHTTCCEEE-CCC
T ss_pred HHhCCCCEEE-EeC
Confidence 9999999986 644
No 323
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=68.55 E-value=18 Score=37.60 Aligned_cols=83 Identities=13% Similarity=0.091 Sum_probs=51.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCC-CCCC-------CCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE--eCCCHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQST-RPMA-------TKISAEKELERLIPVLEAVLTMPEMEGKLVSV--DTFYSK 300 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eSt-rP~a-------~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI--DT~~~~ 300 (480)
.+.+++.+.|+...+.|||.|.+-.-.. ++.. ...|-...+..-..++..+++... .++||.- +-.+++
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~-~~iPVIg~GGI~s~~ 386 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTN-KQIPIIASGGIFSGL 386 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTT-TCSCEEEESSCCSHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcC-CCCcEEEECCCCCHH
Confidence 4667899999999999999998864211 1110 111111122333455666665421 1566655 567888
Q ss_pred HHHHHHHcCCCEEe
Q 038230 301 VASEAVGKGAHIVN 314 (480)
Q Consensus 301 v~~aaL~~G~~iIN 314 (480)
.+.+++.+||+.+-
T Consensus 387 DA~e~l~aGAd~Vq 400 (443)
T 1tv5_A 387 DALEKIEAGASVCQ 400 (443)
T ss_dssp HHHHHHHTTEEEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 88888888888885
No 324
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=68.46 E-value=18 Score=37.80 Aligned_cols=67 Identities=21% Similarity=0.251 Sum_probs=42.8
Q ss_pred HHHHHHcCCCEEEeCCCCCC-------CCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHcCC
Q 038230 240 VRLMISEGADMIDIGAQSTR-------PMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGKGA 310 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~eStr-------P~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~G~ 310 (480)
|+.+.+.|||.|++|.+... .+. ..+. +..+..+.+.+++ .++||..|. .+++-+.+|+..||
T Consensus 292 a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~-g~p~---~~~l~~v~~~~~~----~~ipvia~GGI~~~~di~kala~GA 363 (494)
T 1vrd_A 292 TEALIKAGADAVKVGVGPGSICTTRVVAGV-GVPQ---LTAVMECSEVARK----YDVPIIADGGIRYSGDIVKALAAGA 363 (494)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHHCC-CCCH---HHHHHHHHHHHHT----TTCCEEEESCCCSHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEcCCCCccccccccCCC-CccH---HHHHHHHHHHHhh----cCCCEEEECCcCCHHHHHHHHHcCC
Confidence 47778999999999764310 000 1111 2333333333333 278888854 68999999999999
Q ss_pred CEEe
Q 038230 311 HIVN 314 (480)
Q Consensus 311 ~iIN 314 (480)
+.+.
T Consensus 364 d~V~ 367 (494)
T 1vrd_A 364 ESVM 367 (494)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 9987
No 325
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=68.46 E-value=9.2 Score=40.26 Aligned_cols=75 Identities=17% Similarity=0.101 Sum_probs=46.5
Q ss_pred HHHHHHHHcCCCEEEeCCCC-----CCCCC-CCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcC
Q 038230 238 SQVRLMISEGADMIDIGAQS-----TRPMA-TKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKG 309 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eS-----trP~a-~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G 309 (480)
+.|+++.+.|||.|++|..+ |+... ..++... -...+..+++. .++||..| -.++.-+.+|+..|
T Consensus 308 ~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~----~~~~~~~~~~~---~~ipVia~GGI~~~~di~kala~G 380 (514)
T 1jcn_A 308 AQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGT----AVYKVAEYARR---FGVPIIADGGIQTVGHVVKALALG 380 (514)
T ss_dssp HHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHH----HHHHHHHHHGG---GTCCEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEECCCCCcccccccccCCCccchh----HHHHHHHHHhh---CCCCEEEECCCCCHHHHHHHHHcC
Confidence 34788889999999996421 12110 0111211 12334444543 37888874 46889999999999
Q ss_pred CCEEecCCCC
Q 038230 310 AHIVNDVSAG 319 (480)
Q Consensus 310 ~~iINdVsg~ 319 (480)
|+.+-=-+.+
T Consensus 381 Ad~V~iG~~~ 390 (514)
T 1jcn_A 381 ASTVMMGSLL 390 (514)
T ss_dssp CSEEEESTTT
T ss_pred CCeeeECHHH
Confidence 9988755543
No 326
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=68.24 E-value=23 Score=36.36 Aligned_cols=109 Identities=12% Similarity=0.103 Sum_probs=67.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEE--EeCCCC-------C------CC------CCCCCCHHHHHHHHHHHHHHHHcCCcCCC
Q 038230 231 QSVEAAVSQVRLMISEGADMI--DIGAQS-------T------RP------MATKISAEKELERLIPVLEAVLTMPEMEG 289 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiI--DIG~eS-------t------rP------~a~~v~~~eE~~rl~~vi~~l~~~~~~~~ 289 (480)
.++++..+.|++++++|-..+ .+|... . .| +....+.++.+++....|+++++... .+
T Consensus 149 ~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~G-~d 227 (425)
T 3vcn_A 149 ETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVLG-WD 227 (425)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHHC-SS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHcC-CC
Confidence 468999999999999999876 456310 0 01 10112233334455555666666432 37
Q ss_pred CeEEEeCC---CHHHHHHH---HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEc
Q 038230 290 KLVSVDTF---YSKVASEA---VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMH 340 (480)
Q Consensus 290 ~pISIDT~---~~~v~~aa---L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh 340 (480)
++|.+|.. +++.+.+. |+ .|..+|-.-......+.+..+.+..++|+++-.
T Consensus 228 ~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE 285 (425)
T 3vcn_A 228 VHLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDSVPAENQAGFRLIRQHTTTPLAVGE 285 (425)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCSCEEECT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhcCCCCEEeCC
Confidence 89999964 45544333 32 389999765443223678888888899988733
No 327
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=67.95 E-value=30 Score=34.97 Aligned_cols=94 Identities=12% Similarity=0.114 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHH-
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVG- 307 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~- 307 (480)
++++..+.|++++++|-+.|.+-... +.+++.+++ +++++... .+++|.||. ++++.+.+.++
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~--------~~~~~~e~v----~avR~a~g-~d~~l~vDan~~~~~~~a~~~~~~ 211 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGG--------PLKADIAMV----AEVRRAVG-DDVDLFIDINGAWTYDQALTTIRA 211 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCS--------CHHHHHHHH----HHHHHHHC-TTSCEEEECTTCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhheeecccC--------CHHHHHHHH----HHHHHhhC-CCCEEEEECCCCCCHHHHHHHHHH
Confidence 67889999999999999999986421 344455554 44444311 278999995 45554433333
Q ss_pred ---cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ---KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ---~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.|.++|-+--.....+.+..+.+..++|+++
T Consensus 212 l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~ 245 (397)
T 2qde_A 212 LEKYNLSKIEQPLPAWDLDGMARLRGKVATPIYA 245 (397)
T ss_dssp HGGGCCSCEECCSCTTCHHHHHHHHTTCSSCEEE
T ss_pred HHhCCCCEEECCCChhhHHHHHHHHhhCCCCEEE
Confidence 3888887654322125567777777888876
No 328
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=67.77 E-value=78 Score=29.34 Aligned_cols=141 Identities=13% Similarity=0.068 Sum_probs=80.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC----------CCHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT----------FYSK 300 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT----------~~~~ 300 (480)
.+.+++++.+. +.|.+.|++......+. + +++++++... +++. ++.++.=+ .+++
T Consensus 17 ~~~~~~l~~~~---~~G~~~vEl~~~~~~~~----~-~~~~~~~~~~---l~~~----gl~~~~~~~~~~~~~l~~~d~~ 81 (290)
T 2qul_A 17 VDFPATAKRIA---GLGFDLMEISLGEFHNL----S-DAKKRELKAV---ADDL----GLTVMCCIGLKSEYDFASPDKS 81 (290)
T ss_dssp CCHHHHHHHHH---HTTCSEEEEESTTGGGS----C-HHHHHHHHHH---HHHH----TCEEEEEEEECGGGCTTCSCHH
T ss_pred ccHHHHHHHHH---HhCCCEEEEecCCcccc----c-hhhHHHHHHH---HHHc----CCceEEecCCCCCCCCCCCCHH
Confidence 35666665554 57999999986431111 1 2445554433 3443 55544321 1122
Q ss_pred HHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcC---CCCC-CccccccccchhhHHHHHHHHHHHHHHHHHH
Q 038230 301 VASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHM---RGDP-STMQNEENLQYDDVCKQVASELYSKVRDAEL 376 (480)
Q Consensus 301 v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~---~g~p-~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~ 376 (480)
.-+++++ .-.+.++++++.|+++|.++. .|.. ... ....++..+...+.+.+..+.|.+
T Consensus 82 ~r~~~~~-------------~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~l~~l~~~a~~ 144 (290)
T 2qul_A 82 VRDAGTE-------------YVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLD----MKDKRPYVDRAIESVRRVIKVAED 144 (290)
T ss_dssp HHHHHHH-------------HHHHHHHHHHHHTCSEEEEEEEEESSCCCCTT----CCCCHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHH-------------HHHHHHHHHHHcCCCEEEeeccccCCcccCCC----cccHHHHHHHHHHHHHHHHHHHHH
Confidence 2222111 014678899999999998642 2320 000 011234456667788888899999
Q ss_pred CCCCCCCEEEecCCC----CccChhHHHHHHHhc
Q 038230 377 SGIPAWRIIIDPGLG----FSKKAEHNLDILLGL 406 (480)
Q Consensus 377 ~Gi~~~~IilDPgiG----f~k~~~~~~~~lr~l 406 (480)
+|+ +|.+-|.-. +..+..+..++++.+
T Consensus 145 ~gv---~l~lEn~~~~~~~~~~~~~~~~~l~~~~ 175 (290)
T 2qul_A 145 YGI---IYALEVVNRFEQWLCNDAKEAIAFADAV 175 (290)
T ss_dssp HTC---EEEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred cCC---EEEEEeCccccccccCCHHHHHHHHHHc
Confidence 999 599998543 345667777777765
No 329
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=67.46 E-value=45 Score=33.72 Aligned_cols=108 Identities=17% Similarity=0.132 Sum_probs=65.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQ-----STRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVA 302 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~e-----StrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~ 302 (480)
.++++..+.|++++++|-+.|-+-.. ...|.......+..++.....|+++++... .+++|.||. ++++.+
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G-~d~~l~vDan~~~~~~~a 226 (410)
T 2qq6_A 148 GSNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVG-PEVEVAIDMHGRFDIPSS 226 (410)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHC-SSSEEEEECTTCCCHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcC-CCCEEEEECCCCCCHHHH
Confidence 47889999999999999999987531 000100011112334445555666666421 378999995 455544
Q ss_pred HHHHH----cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 303 SEAVG----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 303 ~aaL~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
.+.++ +|.++|-+--.....+.+..+.++.+++++.-
T Consensus 227 ~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~d 267 (410)
T 2qq6_A 227 IRFARAMEPFGLLWLEEPTPPENLDALAEVRRSTSTPICAG 267 (410)
T ss_dssp HHHHHHHGGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEEC
T ss_pred HHHHHHHhhcCCCeEECCCChhhHHHHHHHHhhCCCCEEeC
Confidence 33333 38999987543321255677777778888863
No 330
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=67.45 E-value=19 Score=33.50 Aligned_cols=85 Identities=20% Similarity=0.101 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHcCCCEEEe---CCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC--CHHHHHHHHHcC
Q 038230 235 AAVSQVRLMISEGADMIDI---GAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF--YSKVASEAVGKG 309 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDI---G~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~--~~~v~~aaL~~G 309 (480)
+.++.|+.+.+.|||.|-+ .+. + .. .......++.+++. .++||.+..+ +++.++++++.|
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~----~---~~----~~~~~~~i~~i~~~---~~iPvi~~Ggi~~~~~~~~~~~~G 97 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISAT----H---EE----RAILLDVVARVAER---VFIPLTVGGGVRSLEDARKLLLSG 97 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSS----T---TC----HHHHHHHHHHHHTT---CCSCEEEESSCCSHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCcc----c---cC----ccccHHHHHHHHHh---CCCCEEEECCcCCHHHHHHHHHcC
Confidence 5677889999999995544 321 1 01 11233456677765 4788888554 389999999999
Q ss_pred CCEEecCCCCCCCch-HHHHHHhcC
Q 038230 310 AHIVNDVSAGQLDPD-MYKVVAGLK 333 (480)
Q Consensus 310 ~~iINdVsg~~~d~~-m~~l~~~~~ 333 (480)
++.+---+....+++ +.++++.++
T Consensus 98 ad~V~lg~~~l~~p~~~~~~~~~~~ 122 (252)
T 1ka9_F 98 ADKVSVNSAAVRRPELIRELADHFG 122 (252)
T ss_dssp CSEEEECHHHHHCTHHHHHHHHHHC
T ss_pred CCEEEEChHHHhCcHHHHHHHHHcC
Confidence 997753332222344 556666665
No 331
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=67.43 E-value=56 Score=32.79 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=74.2
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC--------------------
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF-------------------- 297 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~-------------------- 297 (480)
+.++.+.++|+++|=|=-.+-+. ..++-.++.+++++.+.+.. ...+.|=+.
T Consensus 175 ~ei~~l~~aG~~~IQiDeP~l~~-----~~~~~~~~~v~~~n~~~~~~---~~~~~iHiC~G~~~~~n~d~~~t~~~~~g 246 (357)
T 3rpd_A 175 EEAKELEAAGVDIIQFDEPAFNV-----FFDEVNDWGIACLERAIEGL---KCETAVHICYGYGIKANTDWKKTLGSEWR 246 (357)
T ss_dssp HHHHHHHHTTCSEEEEECGGGGT-----CHHHHHHTHHHHHHHHHTTC---CSEEEEEECSCCSSHHHHHHHTTSCSCCC
T ss_pred HHHHHHHHcCCCEEEecCccccc-----cHHHHHHHHHHHHHHHHhCC---CCceEEEEecCCccCCccccccccccccC
Confidence 45677889999999886432221 13343455667776666542 334433222
Q ss_pred -CHHHHHHHHHcCCCEEecCCCCCC--CchHHHHHHhcCCCEEEEcC-C-CCCCccccccccchhhHHHHHHHHHHHHHH
Q 038230 298 -YSKVASEAVGKGAHIVNDVSAGQL--DPDMYKVVAGLKVPYVAMHM-R-GDPSTMQNEENLQYDDVCKQVASELYSKVR 372 (480)
Q Consensus 298 -~~~v~~aaL~~G~~iINdVsg~~~--d~~m~~l~~~~~~~vVlmh~-~-g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~ 372 (480)
...++..-.+.++|.+. +-.... +-+.++..+ + ..|++-- . -.|. . ++ . +.+.++++
T Consensus 247 ~y~~i~~~l~~~~~D~i~-lE~~~~r~~~e~l~~~~--~-k~v~lGvvd~~s~~-v--------e~-~----eev~~ri~ 308 (357)
T 3rpd_A 247 QYEEVFPKLQKSNIDIIS-LECHNSHVPMELLELIR--G-KKVMVGAIDVATDT-I--------ET-A----EEVADTLR 308 (357)
T ss_dssp GGGGTHHHHHHSSCCEEE-ECCTTCCCCGGGGGGGT--T-SEEEEECSCTTCSS-C--------CC-H----HHHHHHHH
T ss_pred cHHHHHHHHHhCCCCEEE-EEecCCCCChHHHHhcC--C-CEEEeccccCcCCC-C--------CC-H----HHHHHHHH
Confidence 24566666778999884 322211 123444333 2 2332211 0 0111 0 11 1 34456677
Q ss_pred HHHHCCCCCCCEEEecCCCCcc-ChhHHHHHHHhc
Q 038230 373 DAELSGIPAWRIIIDPGLGFSK-KAEHNLDILLGL 406 (480)
Q Consensus 373 ~a~~~Gi~~~~IilDPgiGf~k-~~~~~~~~lr~l 406 (480)
++.+. ++.+++++-|.-||+. +.+..+.-|+.+
T Consensus 309 ~a~~~-v~~~~l~lsPdCGl~~~~~~~a~~kL~~m 342 (357)
T 3rpd_A 309 KALKF-VDADKLYPCTNCGMTPLSHQVTRGKLNAL 342 (357)
T ss_dssp HHHTT-SCGGGEEEECSSCCTTSCHHHHHHHHHHH
T ss_pred HHHHh-CCcccEEEeCCCCCCCCCHHHHHHHHHHH
Confidence 77554 5567999999888853 444444444443
No 332
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=67.35 E-value=26 Score=34.13 Aligned_cols=90 Identities=19% Similarity=0.221 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE------------EeCCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS------------VDTFY 298 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS------------IDT~~ 298 (480)
.+++.+++.|.++++.||+-+=|=+. + ++.+.|+.+.+. ++|++ .+.|.
T Consensus 92 ~s~~~a~~na~rl~kaGa~aVklEdg------------~---e~~~~I~al~~a----gIpV~gHiGLtPQs~~~~ggf~ 152 (275)
T 1o66_A 92 QSKEQAFAAAAELMAAGAHMVKLEGG------------V---WMAETTEFLQMR----GIPVCAHIGLTPQSVFAFGGYK 152 (275)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECS------------G---GGHHHHHHHHHT----TCCEEEEEESCGGGTTC-----
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCc------------H---HHHHHHHHHHHc----CCCeEeeeccCceeecccCCeE
Confidence 47899999999999999999988432 1 244556676665 67765 22221
Q ss_pred --------HHHHHHHHH---cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcC
Q 038230 299 --------SKVASEAVG---KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 299 --------~~v~~aaL~---~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
.+.++.|.. +||+.|- +-+-. .+....+.++..+|++.+-.
T Consensus 153 v~grt~~a~~~i~rA~a~~eAGA~~iv-lE~vp-~~~a~~it~~l~iP~igIGa 204 (275)
T 1o66_A 153 VQGRGGKAQALLNDAKAHDDAGAAVVL-MECVL-AELAKKVTETVSCPTIGIGA 204 (275)
T ss_dssp ------CHHHHHHHHHHHHHTTCSEEE-EESCC-HHHHHHHHHHCSSCEEEESS
T ss_pred EEeChHHHHHHHHHHHHHHHcCCcEEE-EecCC-HHHHHHHHHhCCCCEEEECC
Confidence 344444433 5999886 33322 24456677778899887643
No 333
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=67.13 E-value=51 Score=32.30 Aligned_cols=140 Identities=19% Similarity=0.122 Sum_probs=73.9
Q ss_pred HHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCe--EEEeCCCH-------------HHHHH
Q 038230 240 VRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKL--VSVDTFYS-------------KVASE 304 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~p--ISIDT~~~-------------~v~~a 304 (480)
|....+.|||.|.+...-.-+|-+| |. .+++.+++. .++| +.|--+.- +-++.
T Consensus 52 a~~A~~gGAdRIELc~~l~~GGlTP-S~--------g~i~~a~~~---~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~ 119 (287)
T 3iwp_A 52 AVNAERGGADRIELCSGLSEGGTTP-SM--------GVLQVVKQS---VQIPVFVMIRPRGGDFLYSDREIEVMKADIRL 119 (287)
T ss_dssp HHHHHHHTCSEEEECBCGGGTCBCC-CH--------HHHHHHHTT---CCSCEEEECCSSSSCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEECCCCCCCCCCC-CH--------HHHHHHHHh---cCCCeEEEEecCCCCcccCHHHHHHHHHHHHH
Confidence 4455789999999985432333222 11 234445554 2445 44443332 46777
Q ss_pred HHHcCCCEEecCCCC-----CCC-chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCC
Q 038230 305 AVGKGAHIVNDVSAG-----QLD-PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSG 378 (480)
Q Consensus 305 aL~~G~~iINdVsg~-----~~d-~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~G 378 (480)
+.++|++-| |-|. ..| +.+.++++..+..=|.+|.- -++ . .| ..+.++.+.++|
T Consensus 120 ~~~~GAdGv--VfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRA---FD~--~-----~d--------~~~Ale~Li~lG 179 (287)
T 3iwp_A 120 AKLYGADGL--VFGALTEDGHIDKELCMSLMAICRPLPVTFHRA---FDM--V-----HD--------PMAALETLLTLG 179 (287)
T ss_dssp HHHTTCSEE--EECCBCTTSCBCHHHHHHHHHHHTTSCEEECGG---GGG--C-----SC--------HHHHHHHHHHHT
T ss_pred HHHcCCCEE--EEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECc---hhc--c-----CC--------HHHHHHHHHHcC
Confidence 788898866 3332 123 45666666654333444541 000 0 01 124455556668
Q ss_pred CCCCCEEEecCCCCccChhHHHHHHHhc-c--cCCCcEEEe
Q 038230 379 IPAWRIIIDPGLGFSKKAEHNLDILLGL-A--ASHAPILIG 416 (480)
Q Consensus 379 i~~~~IilDPgiGf~k~~~~~~~~lr~l-~--~~g~Pil~G 416 (480)
++ +|+-= |-..+..++++.|+++ . ...++|+.|
T Consensus 180 vd--rILTS---G~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaG 215 (287)
T 3iwp_A 180 FE--RVLTS---GCDSSALEGLPLIKRLIEQAKGRIVVMPG 215 (287)
T ss_dssp CS--EEEEC---TTSSSTTTTHHHHHHHHHHHTTSSEEEEC
T ss_pred CC--EEECC---CCCCChHHhHHHHHHHHHHhCCCCEEEEC
Confidence 86 66652 2244456778888877 2 224677775
No 334
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=66.98 E-value=43 Score=32.19 Aligned_cols=172 Identities=13% Similarity=0.220 Sum_probs=107.6
Q ss_pred cEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCC
Q 038230 211 TSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGK 290 (480)
Q Consensus 211 ~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~ 290 (480)
-.+.|||--. |.+.|+|++..+++.+..-.-|-||....-| .+|+++..+-...+.
T Consensus 59 hvlvGVLskn---------y~tve~AV~~mk~y~~~~~~avSVGLGaGDP--------~Q~~~Va~IA~~~~P------- 114 (275)
T 3m6y_A 59 YVVVGVLSKD---------YPTVEEAVTAMKAYGKEIDDAVSIGLGAGDN--------RQAAVVAEIAKHYPG------- 114 (275)
T ss_dssp CEEEEEEGGG---------SSSHHHHHHHHHHHHHHTTTCEEEECCTTCG--------GGHHHHHHHTTTCCC-------
T ss_pred cEEEEEEeCC---------CCCHHHHHHHHHHHHHhCCCceEEecCCCCH--------HHHHHHHHHHHhcCC-------
Confidence 4688888654 7899999999999999987668898765444 468776554433332
Q ss_pred eEEEeC--CCHHHHHHHHHcCCCEEecC-------------CC----CCCC------chHHHHHHhcCCCEE-EEcCCCC
Q 038230 291 LVSVDT--FYSKVASEAVGKGAHIVNDV-------------SA----GQLD------PDMYKVVAGLKVPYV-AMHMRGD 344 (480)
Q Consensus 291 pISIDT--~~~~v~~aaL~~G~~iINdV-------------sg----~~~d------~~m~~l~~~~~~~vV-lmh~~g~ 344 (480)
==|.- .-.-..+++|...-.+||.. +| .+.. +..+.++++-|+.-| .+++.|.
T Consensus 115 -~HVNQVFtgag~trg~L~~~~T~VNaLVSPTG~~G~VkISTGp~Sas~~~~~~V~vetAiaml~dmG~~SvKffPM~Gl 193 (275)
T 3m6y_A 115 -SHINQVFPSVGATRANLGEKDSWINSLVSPTGKVGYVNISTGPISAAGEEKAIVPIKTAIALVRDMGGNSLKYFPMKGL 193 (275)
T ss_dssp -SEECCBGGGHHHHHHHHTTCCCEEEEEEBCCSSTTEEECCCSTTGGGSSSCCEEEHHHHHHHHHHHTCCEEEECCCTTT
T ss_pred -CcccccccchHHHHhhcCCCccEEEEEEcCCCCcceEEeccCCCccccCCCceeeHHHHHHHHHHcCCCeeeEeecCCc
Confidence 12221 22334455565446677743 22 1111 236778888888777 6677764
Q ss_pred CCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc-ccCCCcEEEeecccccc
Q 038230 345 PSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL-AASHAPILIGPSRKRFL 423 (480)
Q Consensus 345 p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l-~~~g~Pil~G~SrKsfi 423 (480)
-. .+++....+.|-+.|+ +|.|--|.... |++.|-++ ..-|+|.+|-+=-.|.|
T Consensus 194 ~~-----------------leEl~avAkAca~~g~-----~lEPTGGIdl~---Nf~~I~~i~l~aGv~~viPHIYsSII 248 (275)
T 3m6y_A 194 AH-----------------EEEYRAVAKACAEEGF-----ALEPTGGIDKE---NFETIVRIALEANVEQVIPHVYSSII 248 (275)
T ss_dssp TT-----------------HHHHHHHHHHHHHHTC-----EEEEBSSCCTT---THHHHHHHHHHTTCSCBCCEECGGGB
T ss_pred cc-----------------HHHHHHHHHHHHHcCc-----eECCCCCccHh---HHHHHHHHHHHcCCCeecccccceec
Confidence 31 2556677777888887 89995454332 33333332 34588877777677787
Q ss_pred ccccCCCCc
Q 038230 424 GEICNRPSA 432 (480)
Q Consensus 424 ~~v~g~~~~ 432 (480)
..-+|...|
T Consensus 249 Dk~TG~Trp 257 (275)
T 3m6y_A 249 DKETGNTKV 257 (275)
T ss_dssp CTTTCCBCH
T ss_pred cCCCCCCCH
Confidence 777776543
No 335
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=66.94 E-value=12 Score=38.06 Aligned_cols=102 Identities=12% Similarity=-0.085 Sum_probs=61.9
Q ss_pred cCCCCCCCCC-ccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eC
Q 038230 219 LTPDSFSDGG-KFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DT 296 (480)
Q Consensus 219 ~tpDSFsdgg-~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT 296 (480)
++|+.++.|. .-.+.+++++.|+.+.+.|+|+|++.+.. ........ .+ +.++.+++. .++||.. --
T Consensus 239 ls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~-~~~~~~~~---~~----~~~~~ik~~---~~iPvi~~Gg 307 (377)
T 2r14_A 239 LTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPD-WIGGDITY---PE----GFREQMRQR---FKGGLIYCGN 307 (377)
T ss_dssp ECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC-------CC---CT----THHHHHHHH---CCSEEEEESS
T ss_pred eccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCc-ccCCCCcc---hH----HHHHHHHHH---CCCCEEEECC
Confidence 4555444321 12467889999999999999999996522 11000000 01 234445544 2556543 34
Q ss_pred CCHHHHHHHHHcC-CCEEecCCCCCCCchHHHHHHh
Q 038230 297 FYSKVASEAVGKG-AHIVNDVSAGQLDPDMYKVVAG 331 (480)
Q Consensus 297 ~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l~~~ 331 (480)
.+++.++++|+.| +|+|-=-.+.-.+|.+..-+++
T Consensus 308 i~~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~ 343 (377)
T 2r14_A 308 YDAGRAQARLDDNTADAVAFGRPFIANPDLPERFRL 343 (377)
T ss_dssp CCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCHHHHHHHHHCCCceEEeecHHHHhCchHHHHHHc
Confidence 4699999999997 9998755554446777766654
No 336
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=66.77 E-value=20 Score=37.46 Aligned_cols=93 Identities=11% Similarity=0.178 Sum_probs=62.1
Q ss_pred CeEEEeCCCHHHHHHHHHc----CCCEEecCCCCCC---------C-----chHHHHHHhcCCCE--EEEcC-CCCCCcc
Q 038230 290 KLVSVDTFYSKVASEAVGK----GAHIVNDVSAGQL---------D-----PDMYKVVAGLKVPY--VAMHM-RGDPSTM 348 (480)
Q Consensus 290 ~pISIDT~~~~v~~aaL~~----G~~iINdVsg~~~---------d-----~~m~~l~~~~~~~v--Vlmh~-~g~p~~~ 348 (480)
-..|+.+.+++++++++++ +.++|--++..+. + .-+..++++.++++ |++|- .|.|..-
T Consensus 22 gi~av~~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv~pV~LhlDHg~~~~w 101 (450)
T 3txv_A 22 GIPSICSAHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPREKILLGGDHLGPNPW 101 (450)
T ss_dssp CEEEECCCCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSGGG
T ss_pred EEEEeCcCCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCcccEEEECCCCCCccc
Confidence 4589999999999999985 7787765654321 1 12345667789996 55554 4444222
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC
Q 038230 349 QNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG 391 (480)
Q Consensus 349 ~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG 391 (480)
+..+ .++-++.-.+.+..+.++|++ .|-||+-..
T Consensus 102 ~~~~-------~~~am~~a~e~i~~aI~AGFt--SVMiD~S~~ 135 (450)
T 3txv_A 102 KHLP-------ADEAMAKAEAMITAYAKAGFT--KLHLDTSMG 135 (450)
T ss_dssp TTSC-------HHHHHHHHHHHHHHHHTTTCC--EEEECCCBC
T ss_pred cccc-------HHHHHHHHHHHHHHHHHcCCC--EEEECCCCC
Confidence 2211 223445667889999999998 999998543
No 337
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=66.75 E-value=7.2 Score=37.09 Aligned_cols=155 Identities=12% Similarity=0.142 Sum_probs=87.4
Q ss_pred HHHHHHHHHHcCCC---EEEeCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHcC
Q 038230 236 AVSQVRLMISEGAD---MIDIGAQST-RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGKG 309 (480)
Q Consensus 236 a~~~A~~~v~~GAd---iIDIG~eSt-rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~G 309 (480)
-++.|+.+.++||| ++|+.+... ++ ....+|+.+.+. ..+|+.+.- .+.+.++..|+.|
T Consensus 33 P~~~a~~~~~~gad~lhvvDld~a~~~~~------------~~~~~i~~i~~~---~~~pl~vGGGIrs~e~~~~~l~~G 97 (243)
T 4gj1_A 33 PLKKFKEYEKAGAKELHLVDLTGAKDPSK------------RQFALIEKLAKE---VSVNLQVGGGIRSKEEVKALLDCG 97 (243)
T ss_dssp HHHHHHHHHHHTCCEEEEEEHHHHHCGGG------------CCHHHHHHHHHH---CCSEEEEESSCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccccch------------hHHHHHHHHHHh---cCCCeEeccccccHHHHHHHHHcC
Confidence 45678899999995 779875311 11 112345566555 478999974 6789999999999
Q ss_pred CC--EEecCCCCCCCchHH-HHHHhcCCC--EEEEcC---C-CCCCcc--ccccccchhhHHHHHHHHHHHHHHHHHHCC
Q 038230 310 AH--IVNDVSAGQLDPDMY-KVVAGLKVP--YVAMHM---R-GDPSTM--QNEENLQYDDVCKQVASELYSKVRDAELSG 378 (480)
Q Consensus 310 ~~--iINdVsg~~~d~~m~-~l~~~~~~~--vVlmh~---~-g~p~~~--~~~~~~~~~~v~~ev~~~l~~~i~~a~~~G 378 (480)
++ +||+.. -.+|+++ +++++|+.. ++.+.. + +...+- ++..+ ..+.+.+..+.+.|
T Consensus 98 adkVii~t~a--~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~-----------~~~~~~~~~~~~~g 164 (243)
T 4gj1_A 98 VKRVVIGSMA--IKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASD-----------KKLMEVLDFYSNKG 164 (243)
T ss_dssp CSEEEECTTT--TTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------C-----------CBHHHHHHHHHTTT
T ss_pred CCEEEEcccc--ccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceeccc-----------chHHHHHHHHhhcC
Confidence 88 455443 2367765 777888744 222221 1 000000 00000 11345566778889
Q ss_pred CCCCCEEE-ec---CCCCccChhHHHHHHHhc-c-cCCCcEEE--eeccccccc
Q 038230 379 IPAWRIII-DP---GLGFSKKAEHNLDILLGL-A-ASHAPILI--GPSRKRFLG 424 (480)
Q Consensus 379 i~~~~Iil-DP---giGf~k~~~~~~~~lr~l-~-~~g~Pil~--G~SrKsfi~ 424 (480)
+. .|++ |- |.+-|-+ +++++.+ + ..++|++. |++...=+.
T Consensus 165 ~~--eil~t~Id~DGt~~G~d----~~l~~~l~~~~~~ipviasGGv~~~~Dl~ 212 (243)
T 4gj1_A 165 LK--HILCTDISKDGTMQGVN----VRLYKLIHEIFPNICIQASGGVASLKDLE 212 (243)
T ss_dssp CC--EEEEEETTC-----CCC----HHHHHHHHHHCTTSEEEEESCCCSHHHHH
T ss_pred Cc--EEEeeeecccccccCCC----HHHHHHHHHhcCCCCEEEEcCCCCHHHHH
Confidence 87 5665 43 5544544 5566666 2 35789876 665444433
No 338
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=66.73 E-value=11 Score=36.84 Aligned_cols=67 Identities=12% Similarity=0.078 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCCEEEeCC-----CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC--HHHHHHHHHcCC
Q 038230 238 SQVRLMISEGADMIDIGA-----QSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY--SKVASEAVGKGA 310 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~-----eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~--~~v~~aaL~~G~ 310 (480)
+.|+.+.+.||+.|++-. .....|.......+ .++.+++. .++|+.+..+- .+.++.+++.|+
T Consensus 32 ~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~-------~i~~I~~~---~~iPv~~k~r~g~~~~~~~~~a~GA 101 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPT-------IVEEVMNA---VSIPVMAKARIGHIVEARVLEAMGV 101 (305)
T ss_dssp HHHHHHHHTTCSEEEECCC-------CCCCCCCCCHH-------HHHHHHHH---CSSCEEEEECTTCHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHH-------HHHHHHHh---CCCCEEecccccchHHHHHHHHCCC
Confidence 578888899999995421 11111111111112 23333443 37888876554 788888999999
Q ss_pred CEEe
Q 038230 311 HIVN 314 (480)
Q Consensus 311 ~iIN 314 (480)
+.|-
T Consensus 102 d~V~ 105 (305)
T 2nv1_A 102 DYID 105 (305)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 9985
No 339
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=66.71 E-value=3.2 Score=38.95 Aligned_cols=142 Identities=18% Similarity=0.152 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHcCCCEE---EeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE--eCCCHHHHHHHHHcC
Q 038230 235 AAVSQVRLMISEGADMI---DIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV--DTFYSKVASEAVGKG 309 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiI---DIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI--DT~~~~v~~aaL~~G 309 (480)
+.++.|+.+.+.|||.| |..+.....+.. ...++.++ . .++|+-+ .-.+++-++++++.|
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~-----------~~~i~~i~-~---~~ipvi~~Ggi~~~~~~~~~~~~G 95 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNAIENSGEN-----------LPVLEKLS-E---FAEHIQIGGGIRSLDYAEKLRKLG 95 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHHHHCCCTT-----------HHHHHHGG-G---GGGGEEEESSCCSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCCEEEEecccccccCCchh-----------HHHHHHHH-h---cCCcEEEECCCCCHHHHHHHHHCC
Q ss_pred CCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHH----------------HHHHHHHH
Q 038230 310 AHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVAS----------------ELYSKVRD 373 (480)
Q Consensus 310 ~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~----------------~l~~~i~~ 373 (480)
++.+---+....+++.+.-+++++-.+++.-+ - ...+...+
T Consensus 96 ad~V~lg~~~l~~p~~~~~~~~~g~~i~~~~d-----------------------~~~~~v~~~g~~~~~~~~~~e~~~~ 152 (241)
T 1qo2_A 96 YRRQIVSSKVLEDPSFLKSLREIDVEPVFSLD-----------------------TRGGRVAFKGWLAEEEIDPVSLLKR 152 (241)
T ss_dssp CCEEEECHHHHHCTTHHHHHHTTTCEEEEEEE-----------------------EETTEECCTTCSSCSCCCHHHHHHH
T ss_pred CCEEEECchHhhChHHHHHHHHcCCcEEEEEE-----------------------ecCCEEEECCceecCCCCHHHHHHH
Q ss_pred HHHCCCCCCCEEEecCCCCccChhHHHHHHHhc-ccCCCcEEEe
Q 038230 374 AELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL-AASHAPILIG 416 (480)
Q Consensus 374 a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l-~~~g~Pil~G 416 (480)
+.+.|+. -|++=.----+....-++++++++ +..+.|++.+
T Consensus 153 ~~~~G~~--~i~~t~~~~~g~~~g~~~~~i~~l~~~~~iPvia~ 194 (241)
T 1qo2_A 153 LKEYGLE--EIVHTEIEKDGTLQEHDFSLTKKIAIEAEVKVLAA 194 (241)
T ss_dssp HHTTTCC--EEEEEETTHHHHTCCCCHHHHHHHHHHHTCEEEEE
T ss_pred HHhCCCC--EEEEEeecccccCCcCCHHHHHHHHHhcCCcEEEE
No 340
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=66.64 E-value=10 Score=37.10 Aligned_cols=125 Identities=10% Similarity=0.129 Sum_probs=71.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGA 310 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~ 310 (480)
.+++++.+.|.+-.++||.++=+=+-. ..|... -+.+++..+++.|++.. ++++|-+-|--.
T Consensus 31 vTpeEia~~A~~a~~AGAaivHlHvRd-~~G~ps----~d~~~~~e~~~~IR~~~--pd~ii~~TTg~~----------- 92 (282)
T 2y7e_A 31 ITPEEQAKEAKACFEAGARVIHLHIRE-DDGRPS----QRLDRFQEAISAIREVV--PEIIIQISTGGA----------- 92 (282)
T ss_dssp CSHHHHHHHHHHHHHHTEEEEEECEEC-TTSCEE----CCHHHHHHHHHHHHHHC--TTSEEEECSSCS-----------
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeecC-CCCCcC----CCHHHHHHHHHHHHHHC--CCeEEEeCCCCC-----------
Confidence 689999999999999999999886533 222221 23556677778888642 478888877310
Q ss_pred CEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCC
Q 038230 311 HIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGL 390 (480)
Q Consensus 311 ~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgi 390 (480)
.....++.+..+ +..-.++-+... +|. ..+..|.+.. .++++.++.+.+.|+.++=.++|+|.
T Consensus 93 -------~~~~~eeR~~~~-~~~Pe~asl~~g----s~N-f~~~v~~n~~----~~~~~~~~~~~e~Gv~pE~e~fd~g~ 155 (282)
T 2y7e_A 93 -------VGESFDKRLAPL-ALKPEMATLNAG----TLN-FGDDIFINHP----ADIIRLAEAFKQYNVVPEVEVYESGM 155 (282)
T ss_dssp -------TTCCHHHHHGGG-GGCCSEEEEECC----CEE-ETTEEECCCH----HHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred -------CCCCHHHHHHHh-hcCCCEEEeccc----ccc-cccccccCCH----HHHHHHHHHHHHcCCeEEEEEECHHH
Confidence 000012233333 333344433321 110 0001111211 44566677778888888888888854
No 341
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=66.62 E-value=29 Score=40.43 Aligned_cols=110 Identities=16% Similarity=0.183 Sum_probs=70.7
Q ss_pred cEEEEEEecCCCCCCCC-CccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCC
Q 038230 211 TSVMGILNLTPDSFSDG-GKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEG 289 (480)
Q Consensus 211 ~~imGIlN~tpDSFsdg-g~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~ 289 (480)
....+.+.-|-|-|+.. +...+.+..++.++++.+.||++|-|.= |. ....+ .+..++ |+.+++. .+
T Consensus 668 ~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~D--t~---G~~~P-~~~~~l---v~~l~~~---~~ 735 (1150)
T 3hbl_A 668 KISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKD--MA---GLLKP-KAAYEL---IGELKSA---VD 735 (1150)
T ss_dssp CEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEE--TT---CCCCH-HHHHHH---HHHHHHH---CC
T ss_pred hheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcC--cc---CCCCH-HHHHHH---HHHHHHh---cC
Confidence 45677888887766643 2235899999999999999999997762 11 11122 445444 5666665 37
Q ss_pred CeEEE---eCCCH--HHHHHHHHcCCCEEec----CCCCCCCchHHHHHHhc
Q 038230 290 KLVSV---DTFYS--KVASEAVGKGAHIVND----VSAGQLDPDMYKVVAGL 332 (480)
Q Consensus 290 ~pISI---DT~~~--~v~~aaL~~G~~iINd----Vsg~~~d~~m~~l~~~~ 332 (480)
+||++ ||+-- ....+|+++|+++|.. +.+....+.+-.++.-.
T Consensus 736 ~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ai~GlG~~~gn~~lE~lv~~L 787 (1150)
T 3hbl_A 736 LPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQPSANSLYYAL 787 (1150)
T ss_dssp SCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCCBHHHHHHHT
T ss_pred CeEEEEeCCCCcHHHHHHHHHHHhCCCEEEEeccccCCCCCCccHHHHHHHH
Confidence 89999 55443 4456888999999853 33333345555555443
No 342
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=66.32 E-value=63 Score=32.51 Aligned_cols=96 Identities=9% Similarity=0.008 Sum_probs=64.4
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISE-GADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAV 306 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~-GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL 306 (480)
.++++..++|++++++ |-..+-+-... -+.+++++++..+-+.+- .+++|.||. ++++.+.+.+
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~-------~~~~~d~~~v~avR~a~G-----~~~~l~vDaN~~~~~~~A~~~~ 233 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGH-------GDLATDEAMIKGLRALLG-----PDIALMLDFNQSLDPAEATRRI 233 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCS-------SCHHHHHHHHHHHHHHHC-----TTSEEEEECTTCSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCC-------CCHHHHHHHHHHHHHHhC-----CCCeEEEeCCCCCCHHHHHHHH
Confidence 6789999999999999 99998765311 135677777644333332 378999995 4555443333
Q ss_pred H----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 307 G----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 307 ~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+ .|..+|-+--.....+.+..+.++.++|++.
T Consensus 234 ~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~ 269 (383)
T 3toy_A 234 ARLADYDLTWIEEPVPQENLSGHAAVRERSEIPIQA 269 (383)
T ss_dssp HHHGGGCCSEEECCSCTTCHHHHHHHHHHCSSCEEE
T ss_pred HHHHhhCCCEEECCCCcchHHHHHHHHhhcCCCEEe
Confidence 2 3888997654322125678888888999887
No 343
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=66.14 E-value=44 Score=33.16 Aligned_cols=90 Identities=20% Similarity=0.145 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHH-
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVG- 307 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~- 307 (480)
++++..+.|++++++|-+.+-+-.. | +++++++ +++++.. .+++|.+|. ++++. .+.++
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~~---~-------~~d~~~v----~avr~a~--~~~~l~vDan~~~~~~~-~~~~~~ 203 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKIK---P-------GWDYEVL----KAVREAF--PEATLTADANSAYSLAN-LAQLKR 203 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECB---T-------TBSHHHH----HHHHHHC--TTSCEEEECTTCCCGGG-HHHHHG
T ss_pred CHHHHHHHHHHHHHhhhheeeeecC---h-------hHHHHHH----HHHHHHc--CCCeEEEecCCCCCHHH-HHHHHH
Confidence 7888999999999999999998641 2 2345554 4444432 378899995 34443 23332
Q ss_pred ---cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ---KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ---~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.|..+|-+--.....+.+..+.++.+++++.
T Consensus 204 l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~ 237 (369)
T 2zc8_A 204 LDELRLDYIEQPLAYDDLLDHAKLQRELSTPICL 237 (369)
T ss_dssp GGGGCCSCEECCSCTTCSHHHHHHHHHCSSCEEE
T ss_pred HHhCCCcEEECCCCcccHHHHHHHHhhCCCCEEE
Confidence 3888888654332236677888888888876
No 344
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=65.82 E-value=31 Score=33.38 Aligned_cols=90 Identities=13% Similarity=0.254 Sum_probs=58.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE------------EeCC-
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS------------VDTF- 297 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS------------IDT~- 297 (480)
.+++.+++.|.++++.||+-+=|=+. + ++.+.|+.+.+. ++|++ .+.|
T Consensus 91 ~~~~~a~~~a~rl~kaGa~aVklEgg------------~---e~~~~I~al~~a----gipV~gHiGLtPq~v~~~ggf~ 151 (264)
T 1m3u_A 91 ATPEQAFENAATVMRAGANMVKIEGG------------E---WLVETVQMLTER----AVPVCGHLGLTPQSVNIFGGYK 151 (264)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEECCCS------------G---GGHHHHHHHHHT----TCCEEEEEESCGGGHHHHTSSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCc------------H---HHHHHHHHHHHC----CCCeEeeecCCceeecccCCeE
Confidence 38899999999999999999988432 1 344566777765 78876 2223
Q ss_pred ----CHHHHHHHHH-------cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcC
Q 038230 298 ----YSKVASEAVG-------KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 298 ----~~~v~~aaL~-------~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
..+.++++++ +|++.|- +-+-. .+..-.+.++..+|++.+-.
T Consensus 152 v~grt~~~a~~~i~rA~a~~eAGA~~iv-lE~vp-~~~a~~it~~l~iP~igIGa 204 (264)
T 1m3u_A 152 VQGRGDEAGDQLLSDALALEAAGAQLLV-LECVP-VELAKRITEALAIPVIGIGA 204 (264)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHTCCEEE-EESCC-HHHHHHHHHHCSSCEEEESS
T ss_pred EEeCCHHHHHHHHHHHHHHHHCCCcEEE-EecCC-HHHHHHHHHhCCCCEEEeCC
Confidence 2333333332 4999886 33322 24455677778899887643
No 345
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=65.79 E-value=84 Score=29.09 Aligned_cols=87 Identities=11% Similarity=-0.004 Sum_probs=51.6
Q ss_pred HHHHHHHHcCCCEEecCCCCCCC-chHHHHHHhcCCCEEEEcCC-CCCCccccccccchhhHHHHHHHHHHHHHHHHHHC
Q 038230 300 KVASEAVGKGAHIVNDVSAGQLD-PDMYKVVAGLKVPYVAMHMR-GDPSTMQNEENLQYDDVCKQVASELYSKVRDAELS 377 (480)
Q Consensus 300 ~v~~aaL~~G~~iINdVsg~~~d-~~m~~l~~~~~~~vVlmh~~-g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~ 377 (480)
+.++.+-+.|.+-|--......+ +++.+.++++|..++.+|.. +.-........ ..++..++..+.+++.++.|.+.
T Consensus 27 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~i~~A~~l 105 (269)
T 3ngf_A 27 ERFRLAAEAGFGGVEFLFPYDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMA-AISGREQEFRDNVDIALHYALAL 105 (269)
T ss_dssp HHHHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCT-TCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEecCCccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcC-CCccHHHHHHHHHHHHHHHHHHc
Confidence 45555555666655321111112 67889999999999987742 11000000000 01233455667889999999999
Q ss_pred CCCCCCEEEecC
Q 038230 378 GIPAWRIIIDPG 389 (480)
Q Consensus 378 Gi~~~~IilDPg 389 (480)
|.+ .|++=||
T Consensus 106 Ga~--~v~~~~g 115 (269)
T 3ngf_A 106 DCR--TLHAMSG 115 (269)
T ss_dssp TCC--EEECCBC
T ss_pred CCC--EEEEccC
Confidence 997 7888787
No 346
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=65.44 E-value=45 Score=33.58 Aligned_cols=102 Identities=10% Similarity=-0.002 Sum_probs=73.3
Q ss_pred CCHHHHHHHHHHHHHcCCC-------EEEeCCCCCC--CCCCCCC----------HHHHHHHHHHHHHHHHcCCcCCCCe
Q 038230 231 QSVEAAVSQVRLMISEGAD-------MIDIGAQSTR--PMATKIS----------AEKELERLIPVLEAVLTMPEMEGKL 291 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAd-------iIDIG~eStr--P~a~~v~----------~~eE~~rl~~vi~~l~~~~~~~~~p 291 (480)
-|.+.+++.|+++.+.|+. |.-.+++-.| |+....- .++=++.+..++-.+.+. ++|
T Consensus 64 e~~e~aleyA~~L~~~~~~l~d~l~ivmR~yfeKPRTs~g~kGl~~dP~ld~s~~i~~GL~ilr~ll~~~~e~----GlP 139 (350)
T 1n8f_A 64 HDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDS----GLP 139 (350)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTTTEEEEEECCCCCCCSSSSCCCTTTCTTSSSCCCHHHHHHHHHHHHHHHHHT----TCC
T ss_pred CCHHHHHHHHHHHHHHHHhhccCeEEEEEeccccCcCCcCcCCCCCCCCccccccHHHHHHHHHHHHHHHHHh----CCc
Confidence 4789999999999999998 8888876544 3433333 356677777665555654 999
Q ss_pred EEEeCCCHHHHHHHHHcCCCEEecCCCCCC-CchHHHHHHhcCCCEEE
Q 038230 292 VSVDTFYSKVASEAVGKGAHIVNDVSAGQL-DPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 292 ISIDT~~~~v~~aaL~~G~~iINdVsg~~~-d~~m~~l~~~~~~~vVl 338 (480)
+.-|-.+|...+.+.+. ++|+- |-+.+- ....+++|...++||-+
T Consensus 140 v~TEvld~~~~~~vad~-vd~~q-IGAR~~esq~hr~~asg~~~PVg~ 185 (350)
T 1n8f_A 140 AAGEFLDMITPQYLADL-MSWGA-IGARTTESQVHRELASGLSCPVGF 185 (350)
T ss_dssp EEEECCCSSTHHHHGGG-CSEEE-ECTTTTTCHHHHHHHHTCSSCEEE
T ss_pred eEEeecCcccHHHHhhc-CcEEE-ECCccccCHHHHHHHhcCCCeEEE
Confidence 99988888888877764 56654 555432 25678888888888776
No 347
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=65.09 E-value=46 Score=34.19 Aligned_cols=81 Identities=11% Similarity=0.163 Sum_probs=48.5
Q ss_pred HHHHHHHHHcCCCEEEeCCCC---------C----CCCCCCCCH-HHHHHHHHHHHHHHHcCCc---CCCCeEEE----e
Q 038230 237 VSQVRLMISEGADMIDIGAQS---------T----RPMATKISA-EKELERLIPVLEAVLTMPE---MEGKLVSV----D 295 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eS---------t----rP~a~~v~~-~eE~~rl~~vi~~l~~~~~---~~~~pISI----D 295 (480)
.+-|+..+++|.|.|+|.+.- . |...-.-|. +...+-+..+|+++++... -.+.||++ +
T Consensus 173 ~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~ 252 (419)
T 3l5a_A 173 RDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPE 252 (419)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSC
T ss_pred HHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccc
Confidence 355677788999999998652 1 111112344 6667778889988886520 02556555 2
Q ss_pred -------CCCH----HHHHHHHH-cCCCEEecCCC
Q 038230 296 -------TFYS----KVASEAVG-KGAHIVNDVSA 318 (480)
Q Consensus 296 -------T~~~----~v~~aaL~-~G~~iINdVsg 318 (480)
.+.. ++++...+ +|+|+|. |++
T Consensus 253 ~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~-vs~ 286 (419)
T 3l5a_A 253 ETRGSDLGYTIDEFNQLIDWVMDVSNIQYLA-IAS 286 (419)
T ss_dssp EEETTEEEECHHHHHHHHHHHHHHSCCCCEE-ECC
T ss_pred cccCCCCCCCHHHHHHHHHHHHhhcCCcEEE-Eee
Confidence 1222 34455556 7999887 443
No 348
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=65.03 E-value=42 Score=34.42 Aligned_cols=108 Identities=15% Similarity=0.076 Sum_probs=67.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEe--CCCCC--------------CCC-------CCCCCHHHHHHHHHHHHHHHHcCCcC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDI--GAQST--------------RPM-------ATKISAEKELERLIPVLEAVLTMPEM 287 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDI--G~eSt--------------rP~-------a~~v~~~eE~~rl~~vi~~l~~~~~~ 287 (480)
.+++++.+.+++.+++|-..+=+ |.... .|. .+..+.+++++.....++++++...
T Consensus 148 ~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~avR~a~G- 226 (426)
T 4e4f_A 148 HSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKLFEAVRDKFG- 226 (426)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHhC-
Confidence 46789999999999999988654 42110 000 0011234566767777888887532
Q ss_pred CCCeEEEeCC---CHHHHHHHHH----cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 288 EGKLVSVDTF---YSKVASEAVG----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 288 ~~~pISIDT~---~~~v~~aaL~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
.+++|.+|.. +++.+.+.++ .|..+|-.-......+.+..+.+..++|+++-
T Consensus 227 ~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~d 285 (426)
T 4e4f_A 227 FNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWMEDPTPAENQACFRLIRQHTVTPIAVG 285 (426)
T ss_dssp TSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECCSCCSSGGGGHHHHTTCCSCEEEC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEECCCChHHHHHHHHHHhcCCCCEEeC
Confidence 3789999964 4444433332 38889976544322256788888888998873
No 349
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=64.97 E-value=24 Score=32.61 Aligned_cols=86 Identities=15% Similarity=0.229 Sum_probs=52.4
Q ss_pred HHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC-------------------CH
Q 038230 239 QVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF-------------------YS 299 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~-------------------~~ 299 (480)
+++++++.|||.+-+|.+.. ....++..+++.+-. .+.+++|.. ..
T Consensus 88 ~~~~~l~~Gad~V~lg~~~l----------~~p~~~~~~~~~~g~-----~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~ 152 (244)
T 2y88_A 88 SLAAALATGCARVNVGTAAL----------ENPQWCARVIGEHGD-----QVAVGLDVQIIDGEHRLRGRGWETDGGDLW 152 (244)
T ss_dssp HHHHHHHTTCSEEEECHHHH----------HCHHHHHHHHHHHGG-----GEEEEEEEEEETTEEEEEEGGGTEEEEEHH
T ss_pred HHHHHHHcCCCEEEECchHh----------hChHHHHHHHHHcCC-----CEEEEEeccccCCCCEEEECCccCCCCCHH
Confidence 47788889999999996431 112344444544432 356777765 26
Q ss_pred HHHHHHHHcCCC--EEecCCCCC----CCchHH-HHHHhcCCCEEEE
Q 038230 300 KVASEAVGKGAH--IVNDVSAGQ----LDPDMY-KVVAGLKVPYVAM 339 (480)
Q Consensus 300 ~v~~aaL~~G~~--iINdVsg~~----~d~~m~-~l~~~~~~~vVlm 339 (480)
+.++.+.+.|++ ++++++... .+.+++ ++.+..+.++|..
T Consensus 153 e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~ipvia~ 199 (244)
T 2y88_A 153 DVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIAS 199 (244)
T ss_dssp HHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHHHTTCSSCEEEE
T ss_pred HHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHHHHhCCCCEEEE
Confidence 777888888887 457766421 133344 4444457777763
No 350
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=64.96 E-value=16 Score=33.78 Aligned_cols=83 Identities=16% Similarity=0.036 Sum_probs=55.0
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHH
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDI 402 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~ 402 (480)
.+.++++++.|+++|++|....+.... ..+++..+...+.+.+..+.|.++|+ +|.+-|.-+. +..+..++
T Consensus 79 ~~~i~~A~~lGa~~v~~~~g~~~~~~~----~~~~~~~~~~~~~l~~l~~~a~~~gv---~l~lEn~~~~--~~~~~~~l 149 (254)
T 3ayv_A 79 LFGLDRAAELGADRAVFHSGIPHGRTP----EEALERALPLAEALGLVVRRARTLGV---RLLLENSHEP--HPEALRPV 149 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCCTTCCH----HHHHHTHHHHHHHTHHHHHHHHHHTC---EEEEECSSCS--SGGGTHHH
T ss_pred HHHHHHHHHhCCCEEEECCCCCccccc----ccHHHHHHHHHHHHHHHHHHHhhcCC---EEEEcCCCCC--CHHHHHHH
Confidence 357889999999999998753332110 01233345566778888889999999 5999986543 55666677
Q ss_pred HHhcccCCCcEEE
Q 038230 403 LLGLAASHAPILI 415 (480)
Q Consensus 403 lr~l~~~g~Pil~ 415 (480)
++.+. +.+.+++
T Consensus 150 ~~~v~-~~vg~~~ 161 (254)
T 3ayv_A 150 LEAHA-GELGFCF 161 (254)
T ss_dssp HHHHT-TSSEEEE
T ss_pred HHhcC-cCEEEEE
Confidence 77654 4444444
No 351
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=64.94 E-value=19 Score=35.80 Aligned_cols=60 Identities=8% Similarity=0.082 Sum_probs=44.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT 296 (480)
.+++++.+.|.+-.++||.|+=+=+--...|... -+.+++..+++.|++.. ++++|-+-|
T Consensus 45 vTpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps----~d~~~y~e~~~~IR~~~--~d~ii~~TT 104 (316)
T 3c6c_A 45 ITPAQIADACVEAAKAGASVAHIHVRDPKTGGGS----RDPVLFKEVVDRVRSSG--TDIVLNLTC 104 (316)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEE----CCHHHHHHHHHHHHTTT--CCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcC----CCHHHHHHHHHHHHHHC--CCeEEEeCC
Confidence 6899999999999999999999875321112211 23567778888888752 488888877
No 352
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=64.89 E-value=23 Score=36.39 Aligned_cols=73 Identities=25% Similarity=0.248 Sum_probs=45.5
Q ss_pred HHHHHHHHcCCCEEEeCCCC-----CCCCCC-CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcC
Q 038230 238 SQVRLMISEGADMIDIGAQS-----TRPMAT-KISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKG 309 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eS-----trP~a~-~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G 309 (480)
+.|+.+.+.|||+|.+|.+. |+.... .++ .+.-+..+.+.+.+ .++||--| -.+++-+.+|+.+|
T Consensus 196 e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p---~~~al~~v~~~~~~----~~IPVIA~GGI~~~~di~kalalG 268 (400)
T 3ffs_A 196 EATKELIENGADGIKVGIGPGSICTTRIVAGVGVP---QITAIEKCSSVASK----FGIPIIADGGIRYSGDIGKALAVG 268 (400)
T ss_dssp HHHHHHHHTTCSEEEECC---------CCSCBCCC---HHHHHHHHHHHHTT----TTCCEEEESCCCSHHHHHHHHTTT
T ss_pred HHHHHHHHcCCCEEEEeCCCCcCcccccccccchh---HHHHHHHHHHHHHh----cCCCEEecCCCCCHHHHHHHHHcC
Confidence 35677889999999997431 221100 122 23444444444443 37888885 46899999999999
Q ss_pred CCEEecCC
Q 038230 310 AHIVNDVS 317 (480)
Q Consensus 310 ~~iINdVs 317 (480)
|+.+-=-+
T Consensus 269 Ad~V~vGt 276 (400)
T 3ffs_A 269 ASSVMIGS 276 (400)
T ss_dssp CSEEEECG
T ss_pred CCEEEECh
Confidence 99886333
No 353
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=64.71 E-value=19 Score=34.60 Aligned_cols=59 Identities=25% Similarity=0.250 Sum_probs=44.6
Q ss_pred HHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHc-CCCEE
Q 038230 240 VRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGK-GAHIV 313 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~-G~~iI 313 (480)
..+..+.|||+|=+-+. .. +. ++ +...++..++. +.-+-+|..+.+.++.|++. |+++|
T Consensus 116 i~ea~~~GAD~ilLi~a-~l------~~-~~---l~~l~~~a~~l----Gl~~lvEv~~~eE~~~A~~l~g~~iI 175 (251)
T 1i4n_A 116 VKLASSVGADAILIIAR-IL------TA-EQ---IKEIYEAAEEL----GMDSLVEVHSREDLEKVFSVIRPKII 175 (251)
T ss_dssp HHHHHHTTCSEEEEEGG-GS------CH-HH---HHHHHHHHHTT----TCEEEEEECSHHHHHHHHTTCCCSEE
T ss_pred HHHHHHcCCCEEEEecc-cC------CH-HH---HHHHHHHHHHc----CCeEEEEeCCHHHHHHHHhcCCCCEE
Confidence 44467899999998863 11 22 34 44455666665 88999999999999999999 99987
No 354
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=64.25 E-value=15 Score=34.50 Aligned_cols=84 Identities=19% Similarity=0.156 Sum_probs=51.5
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCC
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVS 317 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVs 317 (480)
++++..++.|||++-.|.. + .++++..++. +.++-+-+.+++.+.+|++.|+|+|-=..
T Consensus 80 d~~~~A~~aGAd~v~~p~~---------d--------~~v~~~ar~~----g~~~i~Gv~t~~e~~~A~~~Gad~vk~Fp 138 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPGL---------N--------PKIVKLCQDL----NFPITPGVNNPMAIEIALEMGISAVKFFP 138 (224)
T ss_dssp HHHHHHHHHTCSEEECSSC---------C--------HHHHHHHHHT----TCCEECEECSHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHCCCCEEEECCC---------C--------HHHHHHHHHh----CCCEEeccCCHHHHHHHHHCCCCEEEEee
Confidence 5778888999999966631 1 1234444553 55555567789999999999999886433
Q ss_pred CCCC-CchHHHHHHh-c-CCCEEEEcCCCC
Q 038230 318 AGQL-DPDMYKVVAG-L-KVPYVAMHMRGD 344 (480)
Q Consensus 318 g~~~-d~~m~~l~~~-~-~~~vVlmh~~g~ 344 (480)
+... -.+.++-++. . +.++ +...|+
T Consensus 139 a~~~gG~~~lk~l~~~~~~ipv--vaiGGI 166 (224)
T 1vhc_A 139 AEASGGVKMIKALLGPYAQLQI--MPTGGI 166 (224)
T ss_dssp TTTTTHHHHHHHHHTTTTTCEE--EEBSSC
T ss_pred CccccCHHHHHHHHhhCCCCeE--EEECCc
Confidence 2211 1344444443 3 3454 456665
No 355
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=64.10 E-value=26 Score=34.69 Aligned_cols=73 Identities=18% Similarity=0.137 Sum_probs=45.0
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHH--H---HHHHHHHHHHcCCcCCCCeEEE--eCCCHHHHHHHHHcCC
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKEL--E---RLIPVLEAVLTMPEMEGKLVSV--DTFYSKVASEAVGKGA 310 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~--~---rl~~vi~~l~~~~~~~~~pISI--DT~~~~v~~aaL~~G~ 310 (480)
+.|+++++.|||.|+++.- +|.. .+...+. . +-...+..+++. .++||-. .-.+++-+.+||..||
T Consensus 161 e~A~~a~~aGad~Ivvs~h---gG~~-~~~~~~~~~g~~g~~~~~l~~v~~~---~~ipVIa~GGI~~g~Dv~kalalGA 233 (336)
T 1ypf_A 161 EAVRELENAGADATKVGIG---PGKV-CITKIKTGFGTGGWQLAALRWCAKA---ASKPIIADGGIRTNGDVAKSIRFGA 233 (336)
T ss_dssp HHHHHHHHHTCSEEEECSS---CSTT-CHHHHHHSCSSTTCHHHHHHHHHHT---CSSCEEEESCCCSTHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEecC---CCce-eecccccCcCCchhHHHHHHHHHHH---cCCcEEEeCCCCCHHHHHHHHHcCC
Confidence 4678889999999999532 2221 1110110 0 012234444544 3788888 6688899999999999
Q ss_pred CEEecCC
Q 038230 311 HIVNDVS 317 (480)
Q Consensus 311 ~iINdVs 317 (480)
+.+--=+
T Consensus 234 daV~iGr 240 (336)
T 1ypf_A 234 TMVMIGS 240 (336)
T ss_dssp SEEEESG
T ss_pred CEEEeCh
Confidence 9876333
No 356
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=63.90 E-value=16 Score=37.13 Aligned_cols=101 Identities=10% Similarity=-0.002 Sum_probs=64.8
Q ss_pred EecCCCCCCCCC-ccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-
Q 038230 217 LNLTPDSFSDGG-KFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV- 294 (480)
Q Consensus 217 lN~tpDSFsdgg-~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI- 294 (480)
+=++|+.+..+. .-.+.+++++.++.+.+.|+|+|++-.....+ ...+. . ++.+++. .++||..
T Consensus 248 vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~--~~~~~--------~-~~~ir~~---~~iPvi~~ 313 (379)
T 3aty_A 248 LRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN--QQIGD--------V-VAWVRGS---YSGVKISN 313 (379)
T ss_dssp EEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS--CCCCC--------H-HHHHHTT---CCSCEEEE
T ss_pred EEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC--CCccH--------H-HHHHHHH---CCCcEEEE
Confidence 345665543321 12467889999999999999999997532111 11111 2 3455655 3556544
Q ss_pred eCCCHHHHHHHHHcC-CCEEecCCCCCCCchHHHHHHh
Q 038230 295 DTFYSKVASEAVGKG-AHIVNDVSAGQLDPDMYKVVAG 331 (480)
Q Consensus 295 DT~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l~~~ 331 (480)
-..+++.++++|+.| +|+|.--.+.-.+|.+..-+++
T Consensus 314 G~it~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~ 351 (379)
T 3aty_A 314 LRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQ 351 (379)
T ss_dssp SSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHHc
Confidence 445899999999997 9999855554446777766654
No 357
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=63.75 E-value=23 Score=35.99 Aligned_cols=71 Identities=21% Similarity=0.208 Sum_probs=43.7
Q ss_pred HHHHHHHHcCCCEEEeCCCCCC-------CCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 238 SQVRLMISEGADMIDIGAQSTR-------PMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStr-------P~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
+.|+.+.+.|||.|++|++... .+. ..+ .+..+..+.+. .+. .++||..+. .+++-+.+++..
T Consensus 206 ~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~-g~p---~~~~l~~v~~~-~~~---~~ipVia~GGI~~~~d~~~ala~ 277 (404)
T 1eep_A 206 EAALDLISVGADCLKVGIGPGSICTTRIVAGV-GVP---QITAICDVYEA-CNN---TNICIIADGGIRFSGDVVKAIAA 277 (404)
T ss_dssp HHHHHHHTTTCSEEEECSSCSTTSHHHHHHCC-CCC---HHHHHHHHHHH-HTT---SSCEEEEESCCCSHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEECCCCCcCcCccccCCC-Ccc---hHHHHHHHHHH-Hhh---cCceEEEECCCCCHHHHHHHHHc
Confidence 4567778899999999643211 000 011 12223222222 222 378888854 789999999999
Q ss_pred CCCEEecC
Q 038230 309 GAHIVNDV 316 (480)
Q Consensus 309 G~~iINdV 316 (480)
||+.+.--
T Consensus 278 GAd~V~iG 285 (404)
T 1eep_A 278 GADSVMIG 285 (404)
T ss_dssp TCSEEEEC
T ss_pred CCCHHhhC
Confidence 99988743
No 358
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=63.65 E-value=20 Score=41.77 Aligned_cols=92 Identities=14% Similarity=0.109 Sum_probs=60.9
Q ss_pred cEEEEEEecCCCCCCCCCc-cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCC
Q 038230 211 TSVMGILNLTPDSFSDGGK-FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEG 289 (480)
Q Consensus 211 ~~imGIlN~tpDSFsdgg~-~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~ 289 (480)
..+-+.+..|. +|.|+.+ ..+++.+++.++++.+.||++|-|.= |.- +....+..++ |+.+++. .+
T Consensus 686 ~~v~~~i~~~~-~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~D--T~G----~~~P~~~~~l---v~~l~~~---~~ 752 (1165)
T 2qf7_A 686 KLCEAAICYTG-DILNSARPKYDLKYYTNLAVELEKAGAHIIAVKD--MAG----LLKPAAAKVL---FKALREA---TG 752 (1165)
T ss_dssp CEEEEEEECCS-CTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEE--TTC----CCCHHHHHHH---HHHHHHH---CS
T ss_pred ceEEEEEEEec-cccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC--ccC----CcCHHHHHHH---HHHHHHh---cC
Confidence 34555555553 4667655 25799999999999999999998872 111 1112455554 5555655 27
Q ss_pred CeEEE---eCCCHHH--HHHHHHcCCCEEec
Q 038230 290 KLVSV---DTFYSKV--ASEAVGKGAHIVND 315 (480)
Q Consensus 290 ~pISI---DT~~~~v--~~aaL~~G~~iINd 315 (480)
+||++ ||+--.+ ..+|+++|+++|..
T Consensus 753 ~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ 783 (1165)
T 2qf7_A 753 LPIHFHTHDTSGIAAATVLAAVEAGVDAVDA 783 (1165)
T ss_dssp SCEEEEECBTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhCCCEEEe
Confidence 89999 5555444 46788899999753
No 359
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=63.61 E-value=19 Score=34.93 Aligned_cols=88 Identities=17% Similarity=0.218 Sum_probs=57.6
Q ss_pred EEEEEEecC---CCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCC
Q 038230 212 SVMGILNLT---PDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEME 288 (480)
Q Consensus 212 ~imGIlN~t---pDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~ 288 (480)
.+.|.|..+ || ++ ..+++.+++.++.+.+.|||.|-|.= |- |. ..+ ++.. .+++.+++.. .
T Consensus 135 ~V~~~l~~~~~~e~----~~-~~~~~~~~~~~~~~~~~G~d~i~l~D--t~-G~--~~P-~~~~---~lv~~l~~~~--~ 198 (295)
T 1ydn_A 135 AIRGYVSCVVECPY----DG-PVTPQAVASVTEQLFSLGCHEVSLGD--TI-GR--GTP-DTVA---AMLDAVLAIA--P 198 (295)
T ss_dssp EEEEEEECSSEETT----TE-ECCHHHHHHHHHHHHHHTCSEEEEEE--TT-SC--CCH-HHHH---HHHHHHHTTS--C
T ss_pred eEEEEEEEEecCCc----CC-CCCHHHHHHHHHHHHhcCCCEEEecC--CC-CC--cCH-HHHH---HHHHHHHHhC--C
Confidence 455555554 44 23 36899999999999999999999872 11 11 223 3333 3456667653 2
Q ss_pred CCeEEEeC---CCH--HHHHHHHHcCCCEEec
Q 038230 289 GKLVSVDT---FYS--KVASEAVGKGAHIVND 315 (480)
Q Consensus 289 ~~pISIDT---~~~--~v~~aaL~~G~~iINd 315 (480)
++||++=+ +-- .-..+|+++|++.||-
T Consensus 199 ~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 199 AHSLAGHYHDTGGRALDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp GGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEE
T ss_pred CCeEEEEECCCcchHHHHHHHHHHhCCCEEEe
Confidence 37898854 332 3457888899999985
No 360
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=63.19 E-value=7 Score=38.87 Aligned_cols=59 Identities=12% Similarity=0.159 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT 296 (480)
.+++++.+.|.+-.++||.|+=+=+-....|..- -+.+++..+++.|++. ++++|-+=|
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps----~d~~~~~e~~~~IR~~---~d~iI~~TT 87 (311)
T 3e49_A 29 VTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPT----QDPAAFAEFLPRIKSN---TDAVINLTT 87 (311)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEE----CCHHHHTTHHHHHHHH---CCCEEEECS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcC----CCHHHHHHHHHHHHHh---CCcEEEECC
Confidence 6899999999999999999999875321112211 2355666777778765 355554433
No 361
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=63.07 E-value=26 Score=34.52 Aligned_cols=58 Identities=22% Similarity=0.231 Sum_probs=42.2
Q ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEe
Q 038230 237 VSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iIN 314 (480)
.+.++..++.|+++|.+++.. | .+ +++.+++. ++++......++.++.+.+.|+|.|-
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~--p-------~~-------~~~~l~~~----g~~v~~~v~s~~~a~~a~~~GaD~i~ 149 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGN--P-------TK-------YIRELKEN----GTKVIPVVASDSLARMVERAGADAVI 149 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSC--C-------HH-------HHHHHHHT----TCEEEEEESSHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHHCCCCEEEECCCC--c-------HH-------HHHHHHHc----CCcEEEEcCCHHHHHHHHHcCCCEEE
Confidence 345566678999999998742 2 11 24455554 77888888899999999999999663
No 362
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=63.05 E-value=17 Score=37.84 Aligned_cols=67 Identities=16% Similarity=0.223 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCEE
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHIV 313 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~iI 313 (480)
...++++.++++|+|.|.++..... ....+ ..++.+++.. .++||.+ ....++.++.+.++|+|.|
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G~-------~~~~~----e~i~~i~~~~--p~~pvi~g~~~t~e~a~~l~~~G~d~I 303 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHGH-------SRRVI----ETLEMIKADY--PDLPVVAGNVATPEGTEALIKAGADAV 303 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCS-------SHHHH----HHHHHHHHHC--TTSCEEEEEECSHHHHHHHHHTTCSEE
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCc-------hHHHH----HHHHHHHHHC--CCceEEeCCcCCHHHHHHHHHcCCCEE
Confidence 4567899999999999999753211 11223 3455666542 2577654 4677888999999999988
Q ss_pred e
Q 038230 314 N 314 (480)
Q Consensus 314 N 314 (480)
.
T Consensus 304 ~ 304 (494)
T 1vrd_A 304 K 304 (494)
T ss_dssp E
T ss_pred E
Confidence 6
No 363
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=63.02 E-value=24 Score=37.24 Aligned_cols=70 Identities=23% Similarity=0.328 Sum_probs=44.6
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCC------CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcC
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMAT------KISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKG 309 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~------~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G 309 (480)
+.|+.+++.|||.|.+|...+..... ..+ .+.-+..+.+..++. ++||-.| -.+++-+.+|+.+|
T Consensus 309 e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p---~~~~l~~v~~~~~~~----~iPVIa~GGI~~~~di~kala~G 381 (511)
T 3usb_A 309 EATKALIEAGANVVKVGIGPGSICTTRVVAGVGVP---QLTAVYDCATEARKH----GIPVIADGGIKYSGDMVKALAAG 381 (511)
T ss_dssp HHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCC---HHHHHHHHHHHHHTT----TCCEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCEEEECCCCccccccccccCCCCC---cHHHHHHHHHHHHhC----CCcEEEeCCCCCHHHHHHHHHhC
Confidence 34778889999999997643221100 011 133333444444443 6888775 47899999999999
Q ss_pred CCEEe
Q 038230 310 AHIVN 314 (480)
Q Consensus 310 ~~iIN 314 (480)
|+.+-
T Consensus 382 A~~V~ 386 (511)
T 3usb_A 382 AHVVM 386 (511)
T ss_dssp CSEEE
T ss_pred chhhe
Confidence 98775
No 364
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=62.84 E-value=15 Score=37.13 Aligned_cols=27 Identities=15% Similarity=0.159 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCC
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQST 258 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eSt 258 (480)
+.+...+.+++..+.|++.|+|+....
T Consensus 134 d~~~~~~~~~~a~~~G~~ai~it~d~p 160 (370)
T 1gox_A 134 DRNVVAQLVRRAERAGFKAIALTVDTP 160 (370)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECSCS
T ss_pred CchHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 566677788888899999999997643
No 365
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=62.78 E-value=15 Score=37.94 Aligned_cols=116 Identities=11% Similarity=0.101 Sum_probs=71.9
Q ss_pred CcEEEEEEecCCCCCCCCCcc------CCHHHHHHHHHHHHH-cCCCEEEeCCCCCCCCCCCCCHH--HHHHHHHHHHHH
Q 038230 210 KTSVMGILNLTPDSFSDGGKF------QSVEAAVSQVRLMIS-EGADMIDIGAQSTRPMATKISAE--KELERLIPVLEA 280 (480)
Q Consensus 210 ~~~imGIlN~tpDSFsdgg~~------~~~e~a~~~A~~~v~-~GAdiIDIG~eStrP~a~~v~~~--eE~~rl~~vi~~ 280 (480)
...||==.+.+ .||+.|.| .+.+++++.++++++ -+-..|. +|++++ +.|.++. +.
T Consensus 238 dv~l~vD~aas--e~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~IE----------dPl~~dD~eg~~~L~---~~ 302 (428)
T 3tqp_A 238 DIYLALDAASS--ELYQNGRYDFENNQLTSEEMIDRLTEWTKKYPVISIE----------DGLSENDWAGWKLLT---ER 302 (428)
T ss_dssp TBEEEEECCGG--GSEETTEECCSSSCBCHHHHHHHHHHHHHHSCEEEEE----------CCSCTTCHHHHHHHH---HH
T ss_pred ceEEEEecchh--hhccCCceeccccccCHHHHHHHHHHHHhhcccceEe----------CCCCcccHHHHHHHH---Hh
Confidence 45554333333 47777653 689999999998544 5544443 223221 3344433 22
Q ss_pred HHcCCcCCCCeEEEeC-C--CHHHHHHHHHcC-CCEEe-cC---CCCCCCchHHHHHHhcCCCEEEEcCCCCC
Q 038230 281 VLTMPEMEGKLVSVDT-F--YSKVASEAVGKG-AHIVN-DV---SAGQLDPDMYKVVAGLKVPYVAMHMRGDP 345 (480)
Q Consensus 281 l~~~~~~~~~pISIDT-~--~~~v~~aaL~~G-~~iIN-dV---sg~~~d~~m~~l~~~~~~~vVlmh~~g~p 345 (480)
+. ..++++-|- + +++-++.+++.| +++|| ++ -|.+.--+++.+|+.+|.++++.|..|.+
T Consensus 303 ~~-----~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v~H~sGEt 370 (428)
T 3tqp_A 303 LE-----NKVQLVGDDIFVTNPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVIISHRSGET 370 (428)
T ss_dssp HT-----TTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCC
T ss_pred cC-----CCcceeccccccCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCc
Confidence 21 246777785 5 899999999985 57776 11 11111246889999999999999987654
No 366
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=62.66 E-value=27 Score=32.80 Aligned_cols=115 Identities=18% Similarity=0.136 Sum_probs=61.2
Q ss_pred CcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCC
Q 038230 210 KTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEG 289 (480)
Q Consensus 210 ~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~ 289 (480)
.+++-.++ +|-.|. .+.+.-+..+++-++.|||-||+-.. .++. ...+++.+..-|..+++......
T Consensus 54 ~v~v~~vi-----gFP~G~--~~~~~k~~e~~~Ai~~GAdevd~vin---ig~~---~~g~~~~v~~ei~~v~~a~~~~~ 120 (220)
T 1ub3_A 54 PFRLVTVV-----GFPLGY--QEKEVKALEAALACARGADEVDMVLH---LGRA---KAGDLDYLEAEVRAVREAVPQAV 120 (220)
T ss_dssp SSEEEEEE-----STTTCC--SCHHHHHHHHHHHHHTTCSEEEEECC---HHHH---HTTCHHHHHHHHHHHHHHSTTSE
T ss_pred CceEEEEe-----cCCCCC--CchHHHHHHHHHHHHcCCCEEEeccc---chhh---hCCCHHHHHHHHHHHHHHHcCCC
Confidence 35555554 343332 35577888899999999999998531 1110 00112233333333333221124
Q ss_pred CeEEEeCC--CHHHH----HHHHHcCCCEEecCCCCC-C-----C-chHHHHHHhcCCCEEE
Q 038230 290 KLVSVDTF--YSKVA----SEAVGKGAHIVNDVSAGQ-L-----D-PDMYKVVAGLKVPYVA 338 (480)
Q Consensus 290 ~pISIDT~--~~~v~----~aaL~~G~~iINdVsg~~-~-----d-~~m~~l~~~~~~~vVl 338 (480)
+++-+.|. +++.+ +.|.++|+|+|---+|.. . + ..|.+++ ...++|.+
T Consensus 121 lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~v-g~~v~Vka 181 (220)
T 1ub3_A 121 LKVILETGYFSPEEIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRVA-QGRAQVKA 181 (220)
T ss_dssp EEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHH-TTSSEEEE
T ss_pred ceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhh-CCCCeEEE
Confidence 66666653 34444 444556999999776643 1 1 2344443 44566665
No 367
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=62.65 E-value=20 Score=36.12 Aligned_cols=90 Identities=13% Similarity=0.116 Sum_probs=62.2
Q ss_pred CCHHHHHHHHHHHHH--cCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCC-CCeEEEeCC-CHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMIS--EGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEME-GKLVSVDTF-YSKVASEAV 306 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~--~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~-~~pISIDT~-~~~v~~aaL 306 (480)
.+.+++++.++.+.+ .|.++|+ + | +++ +.++- .+.|++. . ++||+.|=. +++.++.++
T Consensus 201 ~~~~~a~~~~~~l~~~g~~i~~iE---q---P----~~~-~~~~~----~~~l~~~---~~~iPIa~dE~~~~~~~~~~i 262 (389)
T 2oz8_A 201 WTSKEALTKLVAIREAGHDLLWVE---D---P----ILR-HDHDG----LRTLRHA---VTWTQINSGEYLDLQGKRLLL 262 (389)
T ss_dssp BCHHHHHHHHHHHHHTTCCCSEEE---S---C----BCT-TCHHH----HHHHHHH---CCSSEEEECTTCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCceEEe---C---C----CCC-cCHHH----HHHHHhh---CCCCCEEeCCCCCHHHHHHHH
Confidence 478999999999888 6777775 2 2 211 11222 2334443 4 689999866 889999999
Q ss_pred HcC-CCEEecCCCCCCC-chHHHHHHhcCCCEEEE
Q 038230 307 GKG-AHIVNDVSAGQLD-PDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 307 ~~G-~~iINdVsg~~~d-~~m~~l~~~~~~~vVlm 339 (480)
+.| +++|| +.|+-.. -+++.+|+.+|.++++-
T Consensus 263 ~~~~~d~v~-ikGGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 263 EAHAADILN-VHGQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp HTTCCSEEE-ECSCHHHHHHHHHHHHHHTCCEEEC
T ss_pred HcCCCCEEE-ECcCHHHHHHHHHHHHHcCCeEeec
Confidence 986 78887 3343211 57889999999998874
No 368
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=62.59 E-value=6.3 Score=39.23 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT 296 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT 296 (480)
.+++++.+.|.+-.++||.++=+=+-....|... -+.+++..+++.|++. ++++|-+=|
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps----~d~~~~~e~~~~IR~~---~d~iI~~TT 87 (311)
T 3e02_A 29 ITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPS----QDPDLFMRFLPQLKER---TDAILNITT 87 (311)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEE----CCHHHHTTTHHHHHHH---CCCEEEECS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcC----CCHHHHHHHHHHHHHh---CCcEEEECC
Confidence 6899999999999999999998875321112211 2355666777777765 355554433
No 369
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=62.46 E-value=66 Score=32.14 Aligned_cols=97 Identities=10% Similarity=0.051 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISE-GADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAV 306 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~-GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL 306 (480)
.++++..++|++++++ |-..+-+-... + +.+++++++ +++++... .+++|.||.. +++.+.+.+
T Consensus 150 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~--~-----~~~~d~~~v----~avR~~~g-~~~~l~vDan~~~~~~~a~~~~ 217 (372)
T 3tj4_A 150 FTLEDLLAGSARAVEEDGFTRLKIKVGH--D-----DPNIDIARL----TAVRERVD-SAVRIAIDGNGKWDLPTCQRFC 217 (372)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEECCC--S-----SHHHHHHHH----HHHHHHSC-TTCEEEEECTTCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEcCCC--C-----CHHHHHHHH----HHHHHHcC-CCCcEEeeCCCCCCHHHHHHHH
Confidence 4789999999999999 99998875421 1 245666664 55555322 3789999954 455443333
Q ss_pred H----cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 307 G----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 307 ~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
+ .|..+|-+-......+.+..+.++.++|+++-
T Consensus 218 ~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~d 254 (372)
T 3tj4_A 218 AAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALG 254 (372)
T ss_dssp HHTTTSCEEEEESCSCTTCHHHHHHHHHHCSSCEEEC
T ss_pred HHHhhcCCCEEECCCCchhHHHHHHHHhhcCCCEEeC
Confidence 3 27778876443221256777888889998873
No 370
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=62.34 E-value=26 Score=34.83 Aligned_cols=80 Identities=14% Similarity=0.110 Sum_probs=54.7
Q ss_pred CCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE---eCCCHH
Q 038230 224 FSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV---DTFYSK 300 (480)
Q Consensus 224 Fsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI---DT~~~~ 300 (480)
|+++++ .+++.+++.++++.+.||+.|-++= |- | +...+++.++ ++.+++.. .+++|++ ||+--.
T Consensus 160 ~~~~~~-~~~~~~~~~~~~~~~~Ga~~i~l~D--T~-G---~~~P~~v~~l---v~~l~~~~--p~~~i~~H~Hnd~GlA 227 (337)
T 3ble_A 160 WSNGFR-NSPDYVKSLVEHLSKEHIERIFLPD--TL-G---VLSPEETFQG---VDSLIQKY--PDIHFEFHGHNDYDLS 227 (337)
T ss_dssp HHHHHH-HCHHHHHHHHHHHHTSCCSEEEEEC--TT-C---CCCHHHHHHH---HHHHHHHC--TTSCEEEECBCTTSCH
T ss_pred CCCCCc-CCHHHHHHHHHHHHHcCCCEEEEec--CC-C---CcCHHHHHHH---HHHHHHhc--CCCeEEEEecCCcchH
Confidence 666776 4789999999999999999998862 11 1 1122555554 45555542 2688998 445443
Q ss_pred --HHHHHHHcCCCEEec
Q 038230 301 --VASEAVGKGAHIVND 315 (480)
Q Consensus 301 --v~~aaL~~G~~iINd 315 (480)
...+|+++|+++|..
T Consensus 228 ~AN~laAv~aGa~~vd~ 244 (337)
T 3ble_A 228 VANSLQAIRAGVKGLHA 244 (337)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEE
Confidence 456888999999874
No 371
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=62.32 E-value=42 Score=33.67 Aligned_cols=97 Identities=11% Similarity=0.043 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CC-HHHHHHHHH
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FY-SKVASEAVG 307 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~-~~v~~aaL~ 307 (480)
++++..+.|++.+++|-+.+.+-.. .++ -+.+++++++ +++++... .+++|.+|. ++ ++.+.+.++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g--~~g---~~~~~d~~~v----~avR~a~g-~~~~l~vDan~~~~d~~~A~~~~~ 215 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGG--VMG---DDPDTDYAIV----KAVREAAG-PEMEVQIDLASKWHTCGHSAMMAK 215 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECT--TTT---SCHHHHHHHH----HHHHHHHC-SSSEEEEECTTTTCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccC--CCC---CCHHHHHHHH----HHHHHHhC-CCCeEEEECCCCCCCHHHHHHHHH
Confidence 3478889999999999999998652 111 1355666665 44444311 378999996 34 555444333
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.|..+|-+-......+.+..+.+..++|++.
T Consensus 216 ~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~ 250 (374)
T 3sjn_A 216 RLEEFNLNWIEEPVLADSLISYEKLSRQVSQKIAG 250 (374)
T ss_dssp HSGGGCCSEEECSSCTTCHHHHHHHHHHCSSEEEE
T ss_pred HhhhcCceEEECCCCcccHHHHHHHHhhCCCCEEe
Confidence 3889997654322125677777788888886
No 372
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=62.31 E-value=43 Score=35.39 Aligned_cols=74 Identities=16% Similarity=0.063 Sum_probs=46.1
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcCCCEEe
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G~~iIN 314 (480)
+.|+...+.|||.|+|++-..+......+ .++-+..+.+.+.+.....++||-.| -++++-+.+||..||+.+.
T Consensus 355 e~A~~a~~aGad~I~vs~hgG~~~d~~~~---~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~ 430 (511)
T 1kbi_A 355 EDVIKAAEIGVSGVVLSNHGGRQLDFSRA---PIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVG 430 (511)
T ss_dssp HHHHHHHHTTCSEEEECCTTTTSSTTCCC---HHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCccCCCCCc---hHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 34788889999999996532221111112 24444455555542100125777775 4789999999999999886
No 373
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=62.21 E-value=7.6 Score=37.69 Aligned_cols=69 Identities=14% Similarity=0.011 Sum_probs=43.6
Q ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHH------HHHHHHHHHHHHcCCcCCCCeEE--EeCCCHHHHHHHHHc
Q 038230 237 VSQVRLMISEGADMIDIGAQSTRPMATKISAEKE------LERLIPVLEAVLTMPEMEGKLVS--VDTFYSKVASEAVGK 308 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE------~~rl~~vi~~l~~~~~~~~~pIS--IDT~~~~v~~aaL~~ 308 (480)
.+.|+.+.+.||+.|++.. + ++.+.. .......|+.+++. .++|+. .+..+.+.++.++++
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e-~-------v~~~~~~~~G~~~~~~~~~i~~i~~~---~~~Pvi~~~~~~~~~~~~~~~~a 99 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALE-R-------VPADIRAQGGVARMSDPKIIKEIMAA---VSIPVMAKVRIGHFVEAMILEAI 99 (297)
T ss_dssp HHHHHHHHHHTCSEEEECS-S-------CHHHHHHTTCCCCCCCHHHHHHHHTT---CSSCEEEEEETTCHHHHHHHHHT
T ss_pred HHHHHHHHHCCCcEEEecc-c-------cchHHHhhcCCccCCCHHHHHHHHHh---cCCCeEEEeccCCHHHHHHHHHC
Confidence 5688889999999999842 1 111100 00012345566665 367754 345568999999999
Q ss_pred CCCEEecCC
Q 038230 309 GAHIVNDVS 317 (480)
Q Consensus 309 G~~iINdVs 317 (480)
|++.| |.+
T Consensus 100 Gad~v-~~~ 107 (297)
T 2zbt_A 100 GVDFI-DES 107 (297)
T ss_dssp TCSEE-EEE
T ss_pred CCCEE-eee
Confidence 99999 443
No 374
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=61.99 E-value=16 Score=39.76 Aligned_cols=104 Identities=14% Similarity=0.113 Sum_probs=63.8
Q ss_pred EecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCC----CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeE
Q 038230 217 LNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQS----TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLV 292 (480)
Q Consensus 217 lN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eS----trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pI 292 (480)
+=++|+.|.++| .+.+++++.|+.+.+ |+|.|+|-+.. ..|.. ...+ . ...+.++.+++. .++||
T Consensus 229 ~r~s~~~~~~~g--~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~-~~~~-~---~~~~~~~~i~~~---~~~pv 297 (690)
T 3k30_A 229 CRITVEEEIDGG--ITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSR-FAPE-G---RQEEFVAGLKKL---TTKPV 297 (690)
T ss_dssp EEEECCCCSTTS--CCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTT-TCCT-T---TTHHHHTTSGGG---CSSCE
T ss_pred EEECccccCCCC--CCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCc-cCCc-c---ccHHHHHHHHHH---cCCeE
Confidence 334788888887 456888888887755 99999997532 01100 0000 0 012345556655 36776
Q ss_pred EE--eCCCHHHHHHHHHcC-CCEEecCCCCCCCchHHHHHHh
Q 038230 293 SV--DTFYSKVASEAVGKG-AHIVNDVSAGQLDPDMYKVVAG 331 (480)
Q Consensus 293 SI--DT~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l~~~ 331 (480)
.. +-++++.++++|+.| +|+|-=-.+.-.||.+..-+++
T Consensus 298 i~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~~ 339 (690)
T 3k30_A 298 VGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRD 339 (690)
T ss_dssp EECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHT
T ss_pred EEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHHc
Confidence 55 446799999999997 8988533333235666665554
No 375
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=61.99 E-value=33 Score=34.92 Aligned_cols=68 Identities=21% Similarity=0.183 Sum_probs=42.8
Q ss_pred HHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHcCCCEEe
Q 038230 239 QVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~G~~iIN 314 (480)
.|+...+.|||.|+|.+-..+......+. ++-+..+.+.+.. ++||-.|. .+++-+.+||..||+.+.
T Consensus 265 ~A~~a~~aGad~I~vs~~ggr~~~~g~~~---~~~l~~v~~av~~-----~ipVia~GGI~~g~Dv~kalalGAd~V~ 334 (392)
T 2nzl_A 265 DAREAVKHGLNGILVSNHGARQLDGVPAT---IDVLPEIVEAVEG-----KVEVFLDGGVRKGTDVLKALALGAKAVF 334 (392)
T ss_dssp HHHHHHHTTCCEEEECCGGGTSSTTCCCH---HHHHHHHHHHHTT-----SSEEEECSSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEeCCCCCCcCCCCcCh---HHHHHHHHHHcCC-----CCEEEEECCCCCHHHHHHHHHhCCCeeE
Confidence 47888899999999954322221111222 3333333333331 46777754 789999999999999885
No 376
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=61.82 E-value=58 Score=32.66 Aligned_cols=95 Identities=9% Similarity=0.062 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-+.|.|-... + +.+. .++ |+++++... .+++|.||. ++++.+.+.++
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~--~-----~~~~-~e~----v~avr~a~g-~d~~l~vDan~~~~~~~a~~~~~ 229 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPV--A-----DDGP-AAE----IANLRQVLG-PQAKIAADMHWNQTPERALELIA 229 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGG--C-----TTCH-HHH----HHHHHHHHC-TTSEEEEECCSCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCC--C-----ChHH-HHH----HHHHHHHhC-CCCEEEEECCCCCCHHHHHHHHH
Confidence 378899999999999999999986421 1 1123 443 444444211 278999995 45544433332
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+|.++|-+-......+.+..+.+..++|++.
T Consensus 230 ~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~ 264 (388)
T 2nql_A 230 EMQPFDPWFAEAPVWTEDIAGLEKVSKNTDVPIAV 264 (388)
T ss_dssp HHGGGCCSCEECCSCTTCHHHHHHHHTSCCSCEEE
T ss_pred HHhhcCCCEEECCCChhhHHHHHHHHhhCCCCEEE
Confidence 4888887654322114566676677888886
No 377
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=61.75 E-value=28 Score=34.09 Aligned_cols=74 Identities=16% Similarity=0.111 Sum_probs=48.8
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCC---C-CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHHc--
Q 038230 238 SQVRLMISEGADMIDIGAQSTRP---M-ATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVGK-- 308 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP---~-a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~~-- 308 (480)
+.|+.|.+.|||+|-+-..-|.- | ...+|.++-.+++...++++++.. .++.+-.-. ..|+-++.+++.
T Consensus 174 eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vn--pdvivLc~gGpIstpeDv~~~l~~t~ 251 (286)
T 2p10_A 174 EDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIR--DDIIILSHGGPIANPEDARFILDSCQ 251 (286)
T ss_dssp HHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHC--SCCEEEEESTTCCSHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhC--CCcEEEecCCCCCCHHHHHHHHhcCC
Confidence 56778999999999886542222 2 235666665777777777777653 366555555 688888888887
Q ss_pred CCCEE
Q 038230 309 GAHIV 313 (480)
Q Consensus 309 G~~iI 313 (480)
|++=+
T Consensus 252 G~~G~ 256 (286)
T 2p10_A 252 GCHGF 256 (286)
T ss_dssp TCCEE
T ss_pred CccEE
Confidence 76533
No 378
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=61.06 E-value=18 Score=36.30 Aligned_cols=58 Identities=16% Similarity=0.238 Sum_probs=42.0
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEe
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iIN 314 (480)
+.++...+.|+++|.+++.. |. .+ +++.+++. ++++.+....++.++.+.+.|+|.|.
T Consensus 113 ~~~~~~~~~g~~~V~~~~g~--~~------~~-------~i~~~~~~----g~~v~~~v~t~~~a~~a~~~GaD~i~ 170 (369)
T 3bw2_A 113 AKLAVLLDDPVPVVSFHFGV--PD------RE-------VIARLRRA----GTLTLVTATTPEEARAVEAAGADAVI 170 (369)
T ss_dssp HHHHHHHHSCCSEEEEESSC--CC------HH-------HHHHHHHT----TCEEEEEESSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhcCCCEEEEeCCC--Cc------HH-------HHHHHHHC----CCeEEEECCCHHHHHHHHHcCCCEEE
Confidence 34566678999999998643 21 12 34445553 67888888889999999999999886
No 379
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=60.98 E-value=37 Score=34.27 Aligned_cols=96 Identities=11% Similarity=0.114 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCC-CCCCCCH-HHHHHHHHHHHHHHHcCCcCCCCeEEEeCC-----CHHHHHH
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRP-MATKISA-EKELERLIPVLEAVLTMPEMEGKLVSVDTF-----YSKVASE 304 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP-~a~~v~~-~eE~~rl~~vi~~l~~~~~~~~~pISIDT~-----~~~v~~a 304 (480)
++++..+.|++++++|-+.|.+-+ | | |. +. +...++ |+++++... .+++|.||.. +++.+.+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~-s--pvG~---~~~~~~~e~----v~avr~a~G-~d~~l~vDan~~~~~~~~~a~~ 213 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGW-G--PIGR---GTVAADADQ----IMAAREGLG-PDGDLMVDVGQIFGEDVEAAAA 213 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEES-T--TTTS---SCHHHHHHH----HHHHHHHHC-SSSEEEEECTTTTTTCHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcC-C--CCCC---CHHHHHHHH----HHHHHHHhC-CCCeEEEECCCCCCCCHHHHHH
Confidence 678899999999999999999874 1 2 21 22 334444 445554321 2789999953 4444322
Q ss_pred H---H-HcCCCEEecCCCCCCC-chHHHHHH-hcCCCEEEE
Q 038230 305 A---V-GKGAHIVNDVSAGQLD-PDMYKVVA-GLKVPYVAM 339 (480)
Q Consensus 305 a---L-~~G~~iINdVsg~~~d-~~m~~l~~-~~~~~vVlm 339 (480)
. | ++|.++|-+--... + +.+..+.+ ..+++++.-
T Consensus 214 ~~~~l~~~~i~~iEqP~~~~-d~~~~~~l~~~~~~iPI~~d 253 (401)
T 2hzg_A 214 RLPTLDAAGVLWLEEPFDAG-ALAAHAALAGRGARVRIAGG 253 (401)
T ss_dssp THHHHHHTTCSEEECCSCTT-CHHHHHHHHTTCCSSEEEEC
T ss_pred HHHHHHhcCCCEEECCCCcc-CHHHHHHHHhhCCCCCEEec
Confidence 2 2 24899997754322 3 45666665 677887763
No 380
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=60.94 E-value=29 Score=34.73 Aligned_cols=93 Identities=14% Similarity=0.112 Sum_probs=64.2
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVG 307 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~ 307 (480)
..+.++|++.++++.+.|.++|+ | | +.++ .++. ...|++. +++||+.| -+++.-++..++
T Consensus 194 ~~~~~~A~~~~~~l~~~~i~~iE---q---P----~~~~-~~~~----~~~l~~~---~~iPIa~dE~~~~~~~~~~~~~ 255 (368)
T 3q45_A 194 GWSVETAIETLTLLEPYNIQHCE---E---P----VSRN-LYTA----LPKIRQA---CRIPIMADESCCNSFDAERLIQ 255 (368)
T ss_dssp CBCHHHHHHHHHHHGGGCCSCEE---C---C----BCGG-GGGG----HHHHHHT---CSSCEEESTTCCSHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhhcCCCEEE---C---C----CChh-HHHH----HHHHHhh---CCCCEEEcCCcCCHHHHHHHHH
Confidence 35789999999999899999997 2 2 2221 1221 2334554 48999998 467888999998
Q ss_pred c-CCCEEecCCCCC-----CCchHHHHHHhcCCCEEEEcC
Q 038230 308 K-GAHIVNDVSAGQ-----LDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 308 ~-G~~iINdVsg~~-----~d~~m~~l~~~~~~~vVlmh~ 341 (480)
. .+++|| +.-.. .--+++.+|..+|.++++-++
T Consensus 256 ~~~~d~v~-~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 294 (368)
T 3q45_A 256 IQACDSFN-LKLSKSAGITNALNIIRLAEQAHMPVQVGGF 294 (368)
T ss_dssp TTCCSEEE-ECTTTTTSHHHHHHHHHHHHHTTCCEEECCS
T ss_pred cCCCCeEE-echhhcCCHHHHHHHHHHHHHcCCcEEecCc
Confidence 7 478886 32111 114689999999999987443
No 381
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=60.91 E-value=71 Score=32.22 Aligned_cols=97 Identities=14% Similarity=0.079 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHHHHc---CCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHH
Q 038230 231 QSVEAAVSQVRLMISE---GADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASE 304 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~---GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~a 304 (480)
.++++.+++|++++++ |-..+-+-... -+.+++++++.. +++... .+++|.||. ++++.+.+
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~-------~~~~~d~~~v~a----vR~a~G-~~~~l~vDaN~~~~~~~A~~ 237 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLRMGR-------DDPAVDIETAEA----VWDAVG-RDTALMVDFNQGLDMAEAMH 237 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEECCC-------SSHHHHHHHHHH----HHHHHC-TTSEEEEECTTCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEecCC-------CCHHHHHHHHHH----HHHHhC-CCCEEEEECCCCCCHHHHHH
Confidence 5789999999999999 99988765311 135677777544 443211 378999994 45555433
Q ss_pred HHH----cCCCEEecCCCCCCCchHHHHHHhcCCCEEEE
Q 038230 305 AVG----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 305 aL~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm 339 (480)
.++ .|..+|-+--.....+.+..+.++.++|+++-
T Consensus 238 ~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~d 276 (390)
T 3ugv_A 238 RTRQIDDLGLEWIEEPVVYDNFDGYAQLRHDLKTPLMIG 276 (390)
T ss_dssp HHHHHTTSCCSEEECCSCTTCHHHHHHHHHHCSSCEEEC
T ss_pred HHHHHHhhCCCEEECCCCcccHHHHHHHHHhcCCCEEeC
Confidence 333 38888876543221256788888889998874
No 382
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=60.84 E-value=39 Score=34.57 Aligned_cols=94 Identities=16% Similarity=0.101 Sum_probs=59.7
Q ss_pred CH-HHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHHH
Q 038230 232 SV-EAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAVG 307 (480)
Q Consensus 232 ~~-e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL~ 307 (480)
++ ++..+.|++++++|-+.|.+-... +.+++.+++ +++++... .+++|.||.. +++.+.+.++
T Consensus 184 ~~~e~~~~~a~~~~~~Gf~~vKik~g~--------~~~~d~e~v----~avR~avG-~d~~l~vDan~~~~~~eai~~~~ 250 (428)
T 3bjs_A 184 QPKESLAEEAQEYIARGYKALKLRIGD--------AARVDIERV----RHVRKVLG-DEVDILTDANTAYTMADARRVLP 250 (428)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCS--------CHHHHHHHH----HHHHHHHC-TTSEEEEECTTCCCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHCCCCEEEECCCC--------CHHHHHHHH----HHHHHhcC-CCCEEEEECCCCCCHHHHHHHHH
Confidence 45 888999999999999999985321 344555554 44444311 3789999953 5554433332
Q ss_pred ----cCCCEEecCCCCCCCchHHHHHHhcC-CCEEE
Q 038230 308 ----KGAHIVNDVSAGQLDPDMYKVVAGLK-VPYVA 338 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d~~m~~l~~~~~-~~vVl 338 (480)
+|.++|-+--.....+.+..+.++.+ +++++
T Consensus 251 ~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~ 286 (428)
T 3bjs_A 251 VLAEIQAGWLEEPFACNDFASYREVAKITPLVPIAA 286 (428)
T ss_dssp HHHHTTCSCEECCSCTTCHHHHHHHTTTCSSSCEEE
T ss_pred HHHhcCCCEEECCCCccCHHHHHHHHHhCCCCcEEc
Confidence 48888876543221245666666677 88876
No 383
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=60.81 E-value=21 Score=32.79 Aligned_cols=87 Identities=16% Similarity=0.282 Sum_probs=47.6
Q ss_pred HHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC--------------------C
Q 038230 239 QVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF--------------------Y 298 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~--------------------~ 298 (480)
.++++.+.|||.+.+|.+.. ++...+..+++.+... .+.+++|.. .
T Consensus 91 ~~~~~~~~Gad~V~i~~~~~----------~~~~~~~~~~~~~g~~----~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 156 (253)
T 1h5y_A 91 DATTLFRAGADKVSVNTAAV----------RNPQLVALLAREFGSQ----STVVAIDAKWNGEYYEVYVKGGREATGLDA 156 (253)
T ss_dssp HHHHHHHHTCSEEEESHHHH----------HCTHHHHHHHHHHCGG----GEEEEEEEEECSSSEEEEETTTTEEEEEEH
T ss_pred HHHHHHHcCCCEEEEChHHh----------hCcHHHHHHHHHcCCC----cEEEEEEeecCCCcEEEEEeCCeecCCCCH
Confidence 45667778999999995321 1112233333332211 244666653 2
Q ss_pred HHHHHHHHHcCCCEE--ecCCCC----CCCch-HHHHHHhcCCCEEEE
Q 038230 299 SKVASEAVGKGAHIV--NDVSAG----QLDPD-MYKVVAGLKVPYVAM 339 (480)
Q Consensus 299 ~~v~~aaL~~G~~iI--NdVsg~----~~d~~-m~~l~~~~~~~vVlm 339 (480)
.+.++++.+.|++.| ++++.. ..+.+ +..+.+..++++++.
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~~pvia~ 204 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSVRIPVIAS 204 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhcCCCEEEe
Confidence 466888888899865 656531 11323 344444457777764
No 384
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=60.74 E-value=29 Score=33.83 Aligned_cols=82 Identities=20% Similarity=0.244 Sum_probs=52.4
Q ss_pred CCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCc-CCCCeEEE---eCCCH--
Q 038230 226 DGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPE-MEGKLVSV---DTFYS-- 299 (480)
Q Consensus 226 dgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~-~~~~pISI---DT~~~-- 299 (480)
|+++ .+++.+++.++++.+.||+.|-++= |-- +...+++.++ ++.+++..+ ..++||++ ||+--
T Consensus 143 d~~~-~~~~~~~~~~~~~~~~G~~~i~l~D--T~G----~~~P~~v~~l---v~~l~~~~~~~~~~~l~~H~Hnd~Gla~ 212 (293)
T 3ewb_X 143 DATR-SDRAFLIEAVQTAIDAGATVINIPD--TVG----YTNPTEFGQL---FQDLRREIKQFDDIIFASHCHDDLGMAT 212 (293)
T ss_dssp TGGG-SCHHHHHHHHHHHHHTTCCEEEEEC--SSS----CCCHHHHHHH---HHHHHHHCTTGGGSEEEEECBCTTSCHH
T ss_pred cCCC-CCHHHHHHHHHHHHHcCCCEEEecC--CCC----CCCHHHHHHH---HHHHHHhcCCccCceEEEEeCCCcChHH
Confidence 3444 5889999999999999999998762 111 1122455554 444454321 01378998 55443
Q ss_pred HHHHHHHHcCCCEEecCC
Q 038230 300 KVASEAVGKGAHIVNDVS 317 (480)
Q Consensus 300 ~v~~aaL~~G~~iINdVs 317 (480)
....+|+++|++.|..--
T Consensus 213 AN~laA~~aGa~~vd~sv 230 (293)
T 3ewb_X 213 ANALAAIENGARRVEGTI 230 (293)
T ss_dssp HHHHHHHHTTCCEEEEBG
T ss_pred HHHHHHHHhCCCEEEeec
Confidence 445678889999986443
No 385
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=60.70 E-value=6.8 Score=38.83 Aligned_cols=36 Identities=22% Similarity=0.279 Sum_probs=29.7
Q ss_pred EEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCC
Q 038230 216 ILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGA 255 (480)
Q Consensus 216 IlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~ 255 (480)
+||.-=|+|... ..|++++|++.+.++|||.|=+=+
T Consensus 156 ~I~ARTDa~~~~----gldeAi~Ra~ay~eAGAD~ifi~g 191 (302)
T 3fa4_A 156 VVIARTDSLQTH----GYEESVARLRAARDAGADVGFLEG 191 (302)
T ss_dssp EEEEEECCHHHH----CHHHHHHHHHHHHTTTCSEEEETT
T ss_pred EEEEEecccccC----CHHHHHHHHHHHHHcCCCEEeecC
Confidence 567777888642 589999999999999999998843
No 386
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=60.64 E-value=3.2 Score=40.77 Aligned_cols=62 Identities=13% Similarity=0.073 Sum_probs=43.4
Q ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEec
Q 038230 237 VSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVND 315 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINd 315 (480)
...|+.+.+.|||+||-- +--.| + ++... |.+. ..++|+.-|-.+.+.+..++++|++||-.
T Consensus 80 ~~EAqilea~GaD~IDes-evltp-a------d~~~~-------I~k~--~f~vpfv~~~~~l~EAlrri~eGA~mIrT 141 (291)
T 3o07_A 80 FVEAQIIEALEVDYIDES-EVLTP-A------DWTHH-------IEKD--KFKVPFVCGAKDLGEALRRINEGAAMIRT 141 (291)
T ss_dssp HHHHHHHHHTTCSEEEEE-TTSCC-S------CSSCC-------CCGG--GCSSCEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEecc-cCCCH-H------HHHHH-------hhhh--cCCCcEEeeCCCHHHHHHHHHCCCCEEEe
Confidence 557788888999999874 21222 1 11111 1221 12789999999999999999999999973
No 387
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=60.60 E-value=1.1e+02 Score=28.51 Aligned_cols=141 Identities=15% Similarity=0.157 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCC---------CHHH
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTF---------YSKV 301 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~---------~~~v 301 (480)
+.+++++.+ .+.|.+.|++.... -| ..+ +++++++.. .+++. ++.++. =+. +++.
T Consensus 18 ~~~~~l~~~---~~~G~~~vEl~~~~-~~---~~~-~~~~~~~~~---~l~~~----gl~i~~~~~~~~~~~l~~~d~~~ 82 (294)
T 3vni_A 18 DYKYYIEKV---AKLGFDILEIAASP-LP---FYS-DIQINELKA---CAHGN----GITLTVGHGPSAEQNLSSPDPDI 82 (294)
T ss_dssp CHHHHHHHH---HHHTCSEEEEESTT-GG---GCC-HHHHHHHHH---HHHHT----TCEEEEEECCCGGGCTTCSCHHH
T ss_pred CHHHHHHHH---HHcCCCEEEecCcc-cC---CcC-HHHHHHHHH---HHHHc----CCeEEEeecCCCCcCCCCCCHHH
Confidence 566666555 45799999998643 11 122 345555543 33443 666654 221 2222
Q ss_pred HHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEE--cCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCC
Q 038230 302 ASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAM--HMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGI 379 (480)
Q Consensus 302 ~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlm--h~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi 379 (480)
-+++++. -.+.++++++.|+++|.. |. |.|..... ...+++..+...+.+.+..+.|.++|+
T Consensus 83 r~~~~~~-------------~~~~i~~a~~lG~~~v~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~a~~~Gv 146 (294)
T 3vni_A 83 RKNAKAF-------------YTDLLKRLYKLDVHLIGGALYS-YWPIDYTK--TIDKKGDWERSVESVREVAKVAEACGV 146 (294)
T ss_dssp HHHHHHH-------------HHHHHHHHHHHTCCEEEESTTS-CSSCCTTS--CCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHH-------------HHHHHHHHHHhCCCeeeccccC-CCCCcCCC--CCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2222110 135788999999999964 43 22211110 112345566777888999999999999
Q ss_pred CCCCEEEecCCC----CccChhHHHHHHHhc
Q 038230 380 PAWRIIIDPGLG----FSKKAEHNLDILLGL 406 (480)
Q Consensus 380 ~~~~IilDPgiG----f~k~~~~~~~~lr~l 406 (480)
. |.+-|.-. +..+..+..++++.+
T Consensus 147 ~---l~lEn~~~~~~~~~~~~~~~~~l~~~v 174 (294)
T 3vni_A 147 D---FCLEVLNRFENYLINTAQEGVDFVKQV 174 (294)
T ss_dssp E---EEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred E---EEEEecCcccCcccCCHHHHHHHHHHc
Confidence 4 99998632 345667777777765
No 388
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=60.42 E-value=20 Score=35.20 Aligned_cols=57 Identities=16% Similarity=0.158 Sum_probs=42.7
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEe
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iIN 314 (480)
+.++...+.|+|+|.+++.. | . .+++.+++. ++++..+...++.++.+.+.|+|.|-
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~--p-------~-------~~~~~l~~~----gi~vi~~v~t~~~a~~~~~~GaD~i~ 143 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGND--P-------G-------EHIAEFRRH----GVKVIHKCTAVRHALKAERLGVDAVS 143 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESC--C-------H-------HHHHHHHHT----TCEEEEEESSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhcCCCEEEEcCCC--c-------H-------HHHHHHHHc----CCCEEeeCCCHHHHHHHHHcCCCEEE
Confidence 45666678999999999642 2 1 234555654 67888888889999999999999776
No 389
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=60.31 E-value=77 Score=32.39 Aligned_cols=95 Identities=14% Similarity=0.151 Sum_probs=61.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-+.|-|-+.. +.++.++++ +++++... .+++|.||. ++++.+.+.++
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g~--------~~~~d~e~v----~avR~a~G-~d~~l~vDan~~~~~~~a~~~~~ 263 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVGA--------NVQDDIRRC----RLARAAIG-PDIAMAVDANQRWDVGPAIDWMR 263 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCS--------CHHHHHHHH----HHHHHHHC-SSSEEEEECTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCC--------CHHHHHHHH----HHHHHhcC-CCCeEEEECCCCCCHHHHHHHHH
Confidence 477889999999999999999986421 244555554 44444211 378999995 45555444443
Q ss_pred ----cCCCEEecCCCCCCC-chHHHHHHhc-CCCEEEE
Q 038230 308 ----KGAHIVNDVSAGQLD-PDMYKVVAGL-KVPYVAM 339 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d-~~m~~l~~~~-~~~vVlm 339 (480)
.|.++|-+--... + +.+..+.+.. +++++.-
T Consensus 264 ~l~~~~i~~iEqP~~~~-d~~~~~~l~~~~~~iPIa~d 300 (441)
T 2hxt_A 264 QLAEFDIAWIEEPTSPD-DVLGHAAIRQGITPVPVSTG 300 (441)
T ss_dssp TTGGGCCSCEECCSCTT-CHHHHHHHHHHHTTSCEEEC
T ss_pred HHHhcCCCeeeCCCCHH-HHHHHHHHHhhCCCCCEEEe
Confidence 3888887643322 3 4556666665 5888763
No 390
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=60.21 E-value=46 Score=32.37 Aligned_cols=91 Identities=15% Similarity=0.225 Sum_probs=59.4
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE------------eCC
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV------------DTF 297 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI------------DT~ 297 (480)
|.+++++++.|.+++++||+-+=|=+.. +..+.|+.|.+. ++|++- +.|
T Consensus 102 Y~s~~~a~~~a~rl~kaGa~aVklEdg~---------------~~~~~i~~l~~~----GIpv~gHlgltPq~~~~~gg~ 162 (275)
T 3vav_A 102 YGTPADAFASAVKLMRAGAQMVKFEGGE---------------WLAETVRFLVER----AVPVCAHVGLTPQSVHAFGGF 162 (275)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEECCG---------------GGHHHHHHHHHT----TCCEEEEEESCGGGHHHHC--
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCch---------------hHHHHHHHHHHC----CCCEEEecCCCceEEeccCCe
Confidence 3678999999999999999998875421 234556677765 788761 212
Q ss_pred -----CHHHHHHHHH-------cCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcC
Q 038230 298 -----YSKVASEAVG-------KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 298 -----~~~v~~aaL~-------~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
..+.++++++ +||+.|- +-+-. ++.+..+.++..+|+|.+-.
T Consensus 163 ~vqgrt~~~a~~~i~rA~a~~eAGA~~iv-lE~vp-~~~a~~It~~l~iP~igIGa 216 (275)
T 3vav_A 163 KVQGKTEAGAAQLLRDARAVEEAGAQLIV-LEAVP-TLVAAEVTRELSIPTIGIGA 216 (275)
T ss_dssp -CCCCSHHHHHHHHHHHHHHHHHTCSEEE-EESCC-HHHHHHHHHHCSSCEEEESS
T ss_pred EEEcCCHHHHHHHHHHHHHHHHcCCCEEE-ecCCC-HHHHHHHHHhCCCCEEEEcc
Confidence 2233333333 4999886 43333 34566677788999997744
No 391
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=60.05 E-value=61 Score=35.79 Aligned_cols=92 Identities=14% Similarity=0.140 Sum_probs=61.0
Q ss_pred cEEEEEEecCCCCCCCCCc-cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCC
Q 038230 211 TSVMGILNLTPDSFSDGGK-FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEG 289 (480)
Q Consensus 211 ~~imGIlN~tpDSFsdgg~-~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~ 289 (480)
..+.+.+-.+.| |.|+.+ ..+++.+++.++++.+.||++|-|.= |.- .. ...++.++ |+.+++.. .+
T Consensus 238 ~~v~~~i~~~~d-~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~D--T~G---~~-~P~~v~~l---V~~lk~~~--p~ 305 (718)
T 3bg3_A 238 GVVEAAISYTGD-VADPSRTKYSLQYYMGLAEELVRAGTHILCIKD--MAG---LL-KPTACTML---VSSLRDRF--PD 305 (718)
T ss_dssp SEEEEEEECCSC-TTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEEC--TTS---CC-CHHHHHHH---HHHHHHHS--TT
T ss_pred CeEEEEEEeecc-ccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcC--cCC---Cc-CHHHHHHH---HHHHHHhC--CC
Confidence 456677777764 345443 25899999999999999999998872 111 11 22455554 55556542 26
Q ss_pred CeEEE---eCCCHH--HHHHHHHcCCCEEe
Q 038230 290 KLVSV---DTFYSK--VASEAVGKGAHIVN 314 (480)
Q Consensus 290 ~pISI---DT~~~~--v~~aaL~~G~~iIN 314 (480)
+||++ ||+--. ...+|+++|+++|.
T Consensus 306 ~~I~~H~Hnd~GlAvANslaAveAGa~~VD 335 (718)
T 3bg3_A 306 LPLHIHTHDTSGAGVAAMLACAQAGADVVD 335 (718)
T ss_dssp CCEEEECCCTTSCHHHHHHHHHHTTCSEEE
T ss_pred CeEEEEECCCccHHHHHHHHHHHhCCCEEE
Confidence 89999 444433 45688899999975
No 392
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=59.75 E-value=22 Score=33.54 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=52.1
Q ss_pred cEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCC
Q 038230 211 TSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGK 290 (480)
Q Consensus 211 ~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~ 290 (480)
.++-.+++ |--|. .+.+.-+..+++ +++|||-||+-..- ++ + ...+++.+..-|..+++......+
T Consensus 51 v~v~tvig-----FP~G~--~~~~~k~~E~~~-i~~GAdEID~Vini---g~--~-~~g~~~~v~~ei~~v~~a~~~~~l 116 (226)
T 1vcv_A 51 VKLCVVAD-----FPFGA--LPTASRIALVSR-LAEVADEIDVVAPI---GL--V-KSRRWAEVRRDLISVVGAAGGRVV 116 (226)
T ss_dssp SEEEEEES-----TTTCC--SCHHHHHHHHHH-HTTTCSEEEEECCH---HH--H-HTTCHHHHHHHHHHHHHHTTTSEE
T ss_pred CeEEEEeC-----CCCCC--CchHHHHHHHHH-HHCCCCEEEEecch---hh--h-cCCCHHHHHHHHHHHHHHHcCCCc
Confidence 45555553 43332 466777788899 99999999986421 10 0 001122233333333332111245
Q ss_pred eEEEeCCC--HH----HHHHHHHcCCCEEecCCCCC
Q 038230 291 LVSVDTFY--SK----VASEAVGKGAHIVNDVSAGQ 320 (480)
Q Consensus 291 pISIDT~~--~~----v~~aaL~~G~~iINdVsg~~ 320 (480)
++-|.|.. .+ ..+.|.++|+|+|---+|..
T Consensus 117 KvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~ 152 (226)
T 1vcv_A 117 KVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFA 152 (226)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCC
T ss_pred eEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCC
Confidence 65565532 33 33444567999999877754
No 393
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=59.27 E-value=79 Score=31.77 Aligned_cols=95 Identities=12% Similarity=0.129 Sum_probs=64.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHH---
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASE--- 304 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~a--- 304 (480)
.++++.+++|+++++.|-..+-+-.. .+.+++++++ +++++... .+++|.||. ++++.+.+
T Consensus 141 ~~~e~~~~~a~~~~~~Gf~~~KlK~g--------~~~~~d~~~v----~avR~a~g-~~~~L~vDaN~~w~~~~A~~~~~ 207 (379)
T 3r0u_A 141 GNVAETIQNIQNGVEANFTAIKVKTG--------ADFNRDIQLL----KALDNEFS-KNIKFRFDANQGWNLAQTKQFIE 207 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECS--------SCHHHHHHHH----HHHHHHCC-TTSEEEEECTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeecC--------CCHHHHHHHH----HHHHHhcC-CCCeEEEeCCCCcCHHHHHHHHH
Confidence 47899999999999999999887642 1356777775 44555321 268999995 44544433
Q ss_pred HHHc---CCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 305 AVGK---GAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 305 aL~~---G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+|+. |..+|-+--.....+.+..+.+..++|++.
T Consensus 208 ~l~~~~~~l~~iEeP~~~~d~~~~~~l~~~~~iPIa~ 244 (379)
T 3r0u_A 208 EINKYSLNVEIIEQPVKYYDIKAMAEITKFSNIPVVA 244 (379)
T ss_dssp HHHTSCCCEEEEECCSCTTCHHHHHHHHHHCSSCEEE
T ss_pred HHhhcCCCcEEEECCCCcccHHHHHHHHhcCCCCEEe
Confidence 3332 567777654332126788888889999887
No 394
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=59.25 E-value=42 Score=37.25 Aligned_cols=155 Identities=9% Similarity=0.159 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHcCCCEEEeCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE--Ee-CCCHHHHHHHHHcC
Q 038230 235 AAVSQVRLMISEGADMIDIGAQSTRPMA--TKISAEKELERLIPVLEAVLTMPEMEGKLVS--VD-TFYSKVASEAVGKG 309 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~eStrP~a--~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS--ID-T~~~~v~~aaL~~G 309 (480)
...+.++.+.++|+++|=|--.+-+.+. ..++.++..++.+++++.+.+... .+..+. +. .....++..-.+.+
T Consensus 571 a~~~ei~~L~~aG~~~IQiDEP~l~~~l~~~~~~~~~~~~~av~~l~~~~~~v~-~~~~i~~HiC~G~~~~i~~~L~~~~ 649 (755)
T 2nq5_A 571 AIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVK-DETQIHTHMCYSKFDEIIDAIRALD 649 (755)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCHHHHSCSSHHHHHHHHHHHHHHHHHHHSSSC-TTSEEEEEECCSCCSTTHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCcccccccccCCCHHHHHHHHHHHHHHHHhcCC-CCCeEEEEeccCCcHHHHHHHHhCC
Confidence 3445577888999999877632222111 113344556777777777765422 244444 44 22224455555678
Q ss_pred CCEEecCCCCCCCchHHHHHHhc--CCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEe
Q 038230 310 AHIVNDVSAGQLDPDMYKVVAGL--KVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIID 387 (480)
Q Consensus 310 ~~iINdVsg~~~d~~m~~l~~~~--~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilD 387 (480)
+|.|. +-....+-+.+..+.++ +-.+++=-. ++.++.- ++ . +.+.++++++.+. ++.+++++-
T Consensus 650 aD~is-lE~~rsd~e~L~~~~~~~~~~~v~lGvv--d~~s~~v------e~-~----eeV~~ri~~a~~~-v~~e~l~ls 714 (755)
T 2nq5_A 650 ADVIS-IETSRSHGDIIESFETAVYPLGIGLGVY--DIHSPRV------PT-K----EEVVANIERPLRQ-LSPTQFWVN 714 (755)
T ss_dssp CSEEE-C-------------------CEEEEECS--CTTSSCC------CC-H----HHHHHHHHGGGGS-SCGGGEEEE
T ss_pred CCEEE-EecCCCCHHHHHHHHhccCCCeEEEeec--cCccCCC------CC-H----HHHHHHHHHHHHh-CCcccEEEe
Confidence 88875 43221122233333332 433443111 1111110 01 1 3445777777665 566799999
Q ss_pred cCCCCc-cChhHHHHHHHh
Q 038230 388 PGLGFS-KKAEHNLDILLG 405 (480)
Q Consensus 388 PgiGf~-k~~~~~~~~lr~ 405 (480)
|.-||+ .+..+.+..|+.
T Consensus 715 PdCGl~t~t~~e~~~kL~~ 733 (755)
T 2nq5_A 715 PDCGLKTRQEPETIAALKV 733 (755)
T ss_dssp CSSCCTTSCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHH
Confidence 999996 455543333333
No 395
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=59.21 E-value=68 Score=32.20 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=64.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCC--C------CCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQS--T------RPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVA 302 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eS--t------rP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~ 302 (480)
.+.+++.+..+++.+.|++.|.+-... . .|+....+ .+++.+ +++..++. ++++++=+...+.+
T Consensus 182 ~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~-~~~l~~---~~~~a~~~----g~~v~~H~~~~~~i 253 (458)
T 2p9b_A 182 GTPEEARTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMS-VEQMRA---ICDEAHQY----GVIVGAHAQSPEGV 253 (458)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCC-HHHHHH---HHHHHHHT----TCCEEEEECSHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccCCCCCCcCC-HHHHHH---HHHHHHHC----CCeEEEEeCCHHHH
Confidence 356777777888889999988764310 1 22222233 344544 45666665 88999988889999
Q ss_pred HHHHHcCCCEEecCCCCCCCchHHHHHH------hcCCCEE
Q 038230 303 SEAVGKGAHIVNDVSAGQLDPDMYKVVA------GLKVPYV 337 (480)
Q Consensus 303 ~aaL~~G~~iINdVsg~~~d~~m~~l~~------~~~~~vV 337 (480)
+.++++|++.|-=... .+++.++.++ +.|+.++
T Consensus 254 ~~~~~~G~~~i~H~~~--~~~~~~~~~~~~~~~~~~g~~v~ 292 (458)
T 2p9b_A 254 RRSLLAGVDTIEHGSV--LDDELIGMFRHNPNALRGYSALI 292 (458)
T ss_dssp HHHHHHTCSEEEECCC--CCHHHHHHHHCCTTSTTSCCEEE
T ss_pred HHHHHcCCCEEEECCC--CCHHHHHHHhcccccccCCeEEE
Confidence 9999999876644332 2578899999 8887654
No 396
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=59.10 E-value=16 Score=36.96 Aligned_cols=28 Identities=25% Similarity=0.150 Sum_probs=20.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCC
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTR 259 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStr 259 (480)
+.+...+.+++..+.|++.|+|+....-
T Consensus 144 d~~~~~~~~~ra~~aG~~ai~it~d~p~ 171 (368)
T 2nli_A 144 DDQQNRDILDEAKSDGATAIILTADSTV 171 (368)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEESBCC-
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCc
Confidence 5555666667777899999999976544
No 397
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=58.46 E-value=10 Score=37.51 Aligned_cols=49 Identities=20% Similarity=0.291 Sum_probs=35.5
Q ss_pred EEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHH
Q 038230 216 ILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPV 277 (480)
Q Consensus 216 IlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~v 277 (480)
+||.--|+|... ..|++++||+.+.++|||.|=+=+. ...+|++++...
T Consensus 157 ~I~ARTDa~~~~----gldeai~Ra~ay~~AGAD~if~~~~---------~~~ee~~~~~~~ 205 (298)
T 3eoo_A 157 VIMARTDAAAAE----GIDAAIERAIAYVEAGADMIFPEAM---------KTLDDYRRFKEA 205 (298)
T ss_dssp EEEEEECTHHHH----HHHHHHHHHHHHHHTTCSEEEECCC---------CSHHHHHHHHHH
T ss_pred EEEEeehhhhhc----CHHHHHHHHHhhHhcCCCEEEeCCC---------CCHHHHHHHHHH
Confidence 455567888543 4789999999999999999988542 124777776443
No 398
>1vko_A Inositol-3-phosphate synthase; CE21227, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD; 2.30A {Caenorhabditis elegans} SCOP: c.2.1.3 d.81.1.3
Probab=58.33 E-value=22 Score=37.67 Aligned_cols=96 Identities=17% Similarity=0.167 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHH-cC-CCEEEeCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcC
Q 038230 233 VEAAVSQVRLMIS-EG-ADMIDIGAQSTRPMATKISA-EKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKG 309 (480)
Q Consensus 233 ~e~a~~~A~~~v~-~G-AdiIDIG~eStrP~a~~v~~-~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G 309 (480)
.+.+.+..+.+.+ .| ..++-|...||.|..+..+. -..++.+. ++|.+. +-.|+ ...--+.+||++|
T Consensus 224 ve~ir~DIr~Fk~~~~ldrvVVlwtAsTE~~~~~~~g~~~t~~~L~---~ai~~~----~~eis---aS~~YA~AAl~aG 293 (537)
T 1vko_A 224 LEHIRADIRKFKQEHELECVIVLWTANTERYTDVRQGLNATADEIM---ESIRVN----EDEVS---PSNIFAVASILEG 293 (537)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEECSCCCCCCCCCTTTTSSHHHHH---HHHHTT----CSSCC---HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEeCCCCcCCCCCccccccCHHHHH---HHHhcC----CccCC---hHHHHHHHHHhcC
Confidence 5566666666644 66 46788899999997765431 12344443 444543 21222 3334467889999
Q ss_pred CCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 310 AHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 310 ~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+..||-.-....+|++.+++.+.|++++-
T Consensus 294 ~~FIN~sP~~~~~P~~~elae~~gvpI~G 322 (537)
T 1vko_A 294 AHYINGSPQNTLVPGLIELAERHKVFVGG 322 (537)
T ss_dssp CEEEECSSSCCCCHHHHHHHHHHTCCEEC
T ss_pred CceeecCCcccCCHHHHHHHHHhCCceec
Confidence 99999776665579999999999999874
No 399
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=58.29 E-value=54 Score=31.69 Aligned_cols=104 Identities=17% Similarity=0.193 Sum_probs=62.2
Q ss_pred CCCCcc-CCHHHHHHHHHHHHHcC-CCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe----CCC
Q 038230 225 SDGGKF-QSVEAAVSQVRLMISEG-ADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD----TFY 298 (480)
Q Consensus 225 sdgg~~-~~~e~a~~~A~~~v~~G-AdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID----T~~ 298 (480)
..||.+ .+.++-++.-+..++.| +|+|||=.. .+ ++.+ ..+++..++.. +++.+|-= |..
T Consensus 109 ~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~--~~-------~~~~---~~l~~~a~~~~--~kvI~S~Hdf~~tP~ 174 (276)
T 3o1n_A 109 KEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELF--TG-------DDEV---KATVGYAHQHN--VAVIMSNHDFHKTPA 174 (276)
T ss_dssp GGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGG--GC-------HHHH---HHHHHHHHHTT--CEEEEEEEESSCCCC
T ss_pred hhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECc--CC-------HHHH---HHHHHHHHhCC--CEEEEEeecCCCCcC
Confidence 577776 45667777777888889 999999542 21 2223 33455444431 35666642 555
Q ss_pred HHHHHH----HHHcCCCEEecCCCCCCCc---hHHHHHHh-----cCCCEEEEcCC
Q 038230 299 SKVASE----AVGKGAHIVNDVSAGQLDP---DMYKVVAG-----LKVPYVAMHMR 342 (480)
Q Consensus 299 ~~v~~a----aL~~G~~iINdVsg~~~d~---~m~~l~~~-----~~~~vVlmh~~ 342 (480)
.+.+.+ +.+.|+|++-=+...+... .++....+ .+.|+|.|.|.
T Consensus 175 ~~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG 230 (276)
T 3o1n_A 175 AEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMS 230 (276)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 455444 4556999988665444222 24443322 47899999884
No 400
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=58.27 E-value=25 Score=33.97 Aligned_cols=60 Identities=20% Similarity=0.327 Sum_probs=42.3
Q ss_pred HHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEe
Q 038230 240 VRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iIN 314 (480)
..+..+.|||.|=+|... ++ .+++..+ ++..++. ++.+-++..+++.++.|++.|+++|-
T Consensus 128 v~~A~~~GAD~VlLi~a~-------l~-~~~l~~l---~~~a~~l----Gl~~lvev~t~ee~~~A~~~Gad~IG 187 (272)
T 3qja_A 128 IHEARAHGADMLLLIVAA-------LE-QSVLVSM---LDRTESL----GMTALVEVHTEQEADRALKAGAKVIG 187 (272)
T ss_dssp HHHHHHTTCSEEEEEGGG-------SC-HHHHHHH---HHHHHHT----TCEEEEEESSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHcCCCEEEEeccc-------CC-HHHHHHH---HHHHHHC----CCcEEEEcCCHHHHHHHHHCCCCEEE
Confidence 344457999999998521 11 2455554 4444554 77778888999999999999999864
No 401
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=58.23 E-value=37 Score=31.88 Aligned_cols=155 Identities=11% Similarity=0.138 Sum_probs=0.0
Q ss_pred CCCcEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHH-HHcCCc
Q 038230 208 SLKTSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEA-VLTMPE 286 (480)
Q Consensus 208 ~~~~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~-l~~~~~ 286 (480)
+..|+| ++-+++ .+.+++++.+++..+ |||++.+=. +.....+ .+.+...++. ++
T Consensus 1 ~~~~~I--cvpi~~---------~t~~e~~~~~~~~~~-~~D~vElRv-------D~l~~~~-~~~v~~~l~~~~~---- 56 (231)
T 2ocz_A 1 SNAMRI--VAPVMP---------RHFDEAQAIDISKYE-DVNLIEWRA-------DFLPKDE-IVAVAPAIFEKFA---- 56 (231)
T ss_dssp --CCEE--EEEECC---------SSHHHHHTCCGGGGT-TCSEEEEEG-------GGSCGGG-HHHHHHHHHHHTT----
T ss_pred CCCCEE--EEEeCC---------CCHHHHHHHHHHhcc-CCCEEEEEe-------ccccccC-HHHHHHHHHHHcC----
Q ss_pred CCCCeEEEeCC--------------CHHHHHHHHHcC-CCEEecCCCCCCCchHHHHHHhcCCCEEEEcC--CCCCCccc
Q 038230 287 MEGKLVSVDTF--------------YSKVASEAVGKG-AHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHM--RGDPSTMQ 349 (480)
Q Consensus 287 ~~~~pISIDT~--------------~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~--~g~p~~~~ 349 (480)
++|+-+--+ +-+.++.|++.| +++| ||--.. .++++..++++ +.+|+.+- .++|
T Consensus 57 --~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~d~i-DvEl~~-~~~~i~~~~~~-~kvI~S~Hdf~~tp---- 127 (231)
T 2ocz_A 57 --GKEIIFTLRTVQEGGNITLSSQEYVDIIKEINAIYNPDYI-DFEYFT-HKSVFQEMLDF-PNLILSYHNFEETP---- 127 (231)
T ss_dssp --TSEEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHHCCSEE-EEETTT-TGGGGGGGTTC-SSEEEEEEESSCCC----
T ss_pred --CCcEEEEEeecccCCCCCCCHHHHHHHHHHHHHcCCCCEE-EEECCC-CHHHHHHhhcC-CeEEEEecCCCCCH----
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc-----ccCCCcEEE
Q 038230 350 NEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL-----AASHAPILI 415 (480)
Q Consensus 350 ~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l-----~~~g~Pil~ 415 (480)
+.+.++++++.+.|-+-=+|..=| ++..+++.+++-. ...+.|++.
T Consensus 128 ---------------~el~~~~~~~~~~gaDivKia~~a-----~~~~D~l~ll~~~~~~~~~~~~~P~I~ 178 (231)
T 2ocz_A 128 ---------------ENLMEAFSEMTKLAPRVVKIAVMP-----QSEQDVLDLMNYTRGFKTLNPEQEFAT 178 (231)
T ss_dssp ---------------TTHHHHHHHHHHTCCSEEEEEECC-----SSHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ---------------HHHHHHHHHHHHcCCCEEEEEeec-----CCHHHHHHHHHHHHHHhhccCCCCEEE
No 402
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=58.09 E-value=10 Score=37.82 Aligned_cols=93 Identities=14% Similarity=0.171 Sum_probs=63.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.+++++.++++.+.|.++|+ |...|. .-+.+ ..|++. .++||+.|= ++++-++.+++.
T Consensus 194 ~~~~~a~~~~~~L~~~~i~~iE---qP~~~~-----d~~~~-------~~l~~~---~~iPIa~dE~~~~~~~~~~~l~~ 255 (354)
T 3jva_A 194 WTPKDAVKAIQALADYQIELVE---QPVKRR-----DLEGL-------KYVTSQ---VNTTIMADESCFDAQDALELVKK 255 (354)
T ss_dssp SCHHHHHHHHHHTTTSCEEEEE---CCSCTT-----CHHHH-------HHHHHH---CSSEEEESTTCCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEE---CCCChh-----hHHHH-------HHHHHh---CCCCEEEcCCcCCHHHHHHHHHc
Confidence 5889999999999888999998 222221 11223 334443 479999983 678888889987
Q ss_pred -CCCEEecCC-----CCCCCchHHHHHHhcCCCEEEEcCC
Q 038230 309 -GAHIVNDVS-----AGQLDPDMYKVVAGLKVPYVAMHMR 342 (480)
Q Consensus 309 -G~~iINdVs-----g~~~d~~m~~l~~~~~~~vVlmh~~ 342 (480)
.+++|| +. |.+.--+++.+|..+|.++++-++.
T Consensus 256 ~~~d~v~-~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 256 GTVDVIN-IKLMKCGGIHEALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp TCCSEEE-ECHHHHTSHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CCCCEEE-ECchhcCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 578887 32 1111147889999999999875543
No 403
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=57.89 E-value=28 Score=34.88 Aligned_cols=105 Identities=13% Similarity=0.155 Sum_probs=59.9
Q ss_pred EecCCCCCCCCCccC-CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCe-EEE
Q 038230 217 LNLTPDSFSDGGKFQ-SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKL-VSV 294 (480)
Q Consensus 217 lN~tpDSFsdgg~~~-~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~p-ISI 294 (480)
+=++|+.|..|+... +.+..+..++.+.+.|.+.|++...+..+....... . .+.+.++.+. ..| +.-
T Consensus 223 vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~---~~a~~ik~~~------~~~v~~~ 292 (358)
T 4a3u_A 223 VRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQ-P---KLSPEIRKVF------KPPLVLN 292 (358)
T ss_dssp EEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSS-C---CCHHHHHHHC------CSCEEEE
T ss_pred EEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCccccccc-H---HHHHHHHHhc------CCcEEEe
Confidence 466888888887654 455667788889999999999975332221111100 0 0111222222 233 333
Q ss_pred eCCCHHHHHHHHHcC-CCEEecCCCCCCCchHHHHHHh
Q 038230 295 DTFYSKVASEAVGKG-AHIVNDVSAGQLDPDMYKVVAG 331 (480)
Q Consensus 295 DT~~~~v~~aaL~~G-~~iINdVsg~~~d~~m~~l~~~ 331 (480)
=-++++.++++|+.| +|+|-=-...-.||.+..-+++
T Consensus 293 g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp~k~~~ 330 (358)
T 4a3u_A 293 QDYTFETAQAALDSGVADAISFGRPFIGNPDLPRRFFE 330 (358)
T ss_dssp SSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCceEeHhhHHHHhChhHHHHHHh
Confidence 446789999999887 7887532222235665555444
No 404
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=57.81 E-value=8.3 Score=37.39 Aligned_cols=60 Identities=13% Similarity=0.044 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEE
Q 038230 237 VSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIV 313 (480)
Q Consensus 237 ~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iI 313 (480)
.+.++.+.+.|||.||.-...+.|. +++.+++.. .++++++|+.+++.+..+.+.|+++|
T Consensus 90 ~~~~~~~~~aGad~v~~~~~~~~~~---------------~~~~~~~~~--~~i~l~~~v~~~~~~~~a~~~Gad~I 149 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDESEVLTPAD---------------EEHHIDKWK--FKVPFVCGARNLGEALRRIAEGAAMI 149 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSC---------------SSCCCCGGG--CSSCEEEEESSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHCCCCEEeeeCCCChHH---------------HHHHHHHhC--CCceEEeecCCHHHHHHHHHcCCCEE
Confidence 3556777789999996432111110 122222211 27899999999999999999999998
No 405
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=57.80 E-value=18 Score=37.38 Aligned_cols=118 Identities=16% Similarity=0.138 Sum_probs=72.4
Q ss_pred CcEEEEEEecCCCCCCCCCcc------CCHHHHHHHHHHHHH-cCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 038230 210 KTSVMGILNLTPDSFSDGGKF------QSVEAAVSQVRLMIS-EGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVL 282 (480)
Q Consensus 210 ~~~imGIlN~tpDSFsdgg~~------~~~e~a~~~A~~~v~-~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~ 282 (480)
...||==.|.+ .||+.|+| .+.+++++..+++++ -+-..|. +|+++ +.|+-+..+-+.+-
T Consensus 236 dv~l~vD~~as--e~~~~g~y~l~~~~~t~~eai~~~~~ll~~y~i~~IE----------dPl~~-dD~e~~~~L~~~~g 302 (417)
T 3qn3_A 236 RVKIALDVAST--EFFKDGKYHMEGKAFSSEALIERYVELCAKYPICSIE----------DGLAE-NDFEGWIKLTEKLG 302 (417)
T ss_dssp TEEEEEECCGG--GGEETTEEEETTEEECHHHHHHHHHHHHHHSCEEEEE----------SSSCT-TCHHHHHHHHHHHT
T ss_pred CceEEEECCch--hhccCCeeecCCCccCHHHHHHHHHHHHhhcceeEEe----------cCCCc-ccHHHHHHHHHhhC
Confidence 34443333433 48887777 378999999998555 4533333 22322 22433322222221
Q ss_pred cCCcCCCCeEEEeCC---CHHHHHHHHHcC-CCEEe-cC---CCCCCCchHHHHHHhcCCCEEEEcCCCCC
Q 038230 283 TMPEMEGKLVSVDTF---YSKVASEAVGKG-AHIVN-DV---SAGQLDPDMYKVVAGLKVPYVAMHMRGDP 345 (480)
Q Consensus 283 ~~~~~~~~pISIDT~---~~~v~~aaL~~G-~~iIN-dV---sg~~~d~~m~~l~~~~~~~vVlmh~~g~p 345 (480)
.++||+-|=. +++-++.+++.| +++|| ++ -|.+.--+++.+|..+|.++++.|+.|..
T Consensus 303 -----~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vsh~sgEt 368 (417)
T 3qn3_A 303 -----NKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHRSGES 368 (417)
T ss_dssp -----TTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCC
T ss_pred -----CCCceecCCcccCCHHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCCCc
Confidence 1589999843 599999999875 66765 11 11111246889999999999999987654
No 406
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=57.76 E-value=23 Score=32.66 Aligned_cols=57 Identities=11% Similarity=0.051 Sum_probs=38.5
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEec
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVND 315 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINd 315 (480)
++++..++.|||++-.|.. + . ++++..++. ++++.+-..+++.+.+|.+.|+|+|-=
T Consensus 74 d~~~~A~~~GAd~v~~~~~---------d--~------~v~~~~~~~----g~~~i~G~~t~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPGL---------L--E------EVAALAQAR----GVPYLPGVLTPTEVERALALGLSALKF 130 (207)
T ss_dssp HHHHHHHHHTCSEEEESSC---------C--H------HHHHHHHHH----TCCEEEEECSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCCEEEcCCC---------C--H------HHHHHHHHh----CCCEEecCCCHHHHHHHHHCCCCEEEE
Confidence 5677778899999977631 1 1 233333332 455555566799999999999999864
No 407
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=57.75 E-value=20 Score=34.53 Aligned_cols=76 Identities=14% Similarity=0.086 Sum_probs=44.8
Q ss_pred HHHHHHHHHHcCCCEEEeCC---------CCCCCC----CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHH
Q 038230 236 AVSQVRLMISEGADMIDIGA---------QSTRPM----ATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSK 300 (480)
Q Consensus 236 a~~~A~~~v~~GAdiIDIG~---------eStrP~----a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~ 300 (480)
..+.|+.+.+.|||.|++-. .+.+|. ....+....+......++.+++. .++||...- .+++
T Consensus 178 ~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~---~~ipvia~GGI~~~~ 254 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQD---VDIPIIGMGGVANAQ 254 (311)
T ss_dssp SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTT---CSSCEEECSSCCSHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHh---cCCCEEEECCcCCHH
Confidence 34557788899999999932 111110 00011111222234556667765 367777654 5788
Q ss_pred HHHHHHHcCCCEEe
Q 038230 301 VASEAVGKGAHIVN 314 (480)
Q Consensus 301 v~~aaL~~G~~iIN 314 (480)
-++++++.|++.+-
T Consensus 255 d~~~~l~~GAd~V~ 268 (311)
T 1ep3_A 255 DVLEMYMAGASAVA 268 (311)
T ss_dssp HHHHHHHHTCSEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 88888888888774
No 408
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=57.53 E-value=12 Score=38.12 Aligned_cols=90 Identities=13% Similarity=0.053 Sum_probs=63.1
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVG 307 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~ 307 (480)
-.+.++|++.++.+.+.|.++|+= ...|. .-+.+ ..|++. +++||+.|= ++++.++.+++
T Consensus 201 ~~~~~~A~~~~~~L~~~~i~~iEq---P~~~~-----d~~~~-------~~l~~~---~~iPIa~dE~~~~~~~~~~~i~ 262 (393)
T 4dwd_A 201 GYSVGGAIRVGRALEDLGYSWFEE---PVQHY-----HVGAM-------GEVAQR---LDITVSAGEQTYTLQALKDLIL 262 (393)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEC---CSCTT-----CHHHH-------HHHHHH---CSSEEEBCTTCCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCEEEC---CCCcc-----cHHHH-------HHHHhh---CCCCEEecCCcCCHHHHHHHHH
Confidence 357899999999999999999982 22221 11223 334444 489999984 57888899998
Q ss_pred cCCCEEecCCCCC-----CCchHHHHHHhcCCCEEE
Q 038230 308 KGAHIVNDVSAGQ-----LDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ~G~~iINdVsg~~-----~d~~m~~l~~~~~~~vVl 338 (480)
.|+++|| +.-.. .--+++.+|..+|.+++.
T Consensus 263 ~~~d~v~-~k~~~~GGit~~~~ia~~A~~~gi~~~~ 297 (393)
T 4dwd_A 263 SGVRMVQ-PDIVKMGGITGMMQCAALAHAHGVEFVP 297 (393)
T ss_dssp HTCCEEC-CCTTTTTHHHHHHHHHHHHHHHTCEECC
T ss_pred cCCCEEE-eCccccCCHHHHHHHHHHHHHcCCEEee
Confidence 8899998 32211 014688999999999874
No 409
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=57.50 E-value=1.3e+02 Score=28.73 Aligned_cols=59 Identities=12% Similarity=0.100 Sum_probs=40.4
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCC
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLG 391 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiG 391 (480)
+++.++++++|..++.+|......+.. ....++..+.+++.++.|.+.|.+ .|++ ||..
T Consensus 79 ~~l~~~l~~~GL~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~A~~lG~~--~v~~-~~~~ 137 (305)
T 3obe_A 79 KDYKKMVDDAGLRISSSHLTPSLREYT-------KENMPKFDEFWKKATDIHAELGVS--CMVQ-PSLP 137 (305)
T ss_dssp HHHHHHHHHTTCEEEEEBCCCSCCCCC-------GGGHHHHHHHHHHHHHHHHHHTCS--EEEE-CCCC
T ss_pred HHHHHHHHHCCCeEEEeeccccccccc-------hhhHHHHHHHHHHHHHHHHHcCCC--EEEe-CCCC
Confidence 467888999999999888632111110 122344567889999999999997 6665 7653
No 410
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=57.32 E-value=56 Score=31.19 Aligned_cols=105 Identities=19% Similarity=0.182 Sum_probs=63.8
Q ss_pred CCCCCCcc--CCHHHHHHHHHHHHHcC-CCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-e---
Q 038230 223 SFSDGGKF--QSVEAAVSQVRLMISEG-ADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-D--- 295 (480)
Q Consensus 223 SFsdgg~~--~~~e~a~~~A~~~v~~G-AdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-D--- 295 (480)
+-..||.+ .+.++-++.-+..++.| +|+|||=.. .+ + .+..+++..++.. +.+.+|- |
T Consensus 87 t~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~--~~--------~---~~~~l~~~~~~~~--~kvI~S~Hdf~~ 151 (257)
T 2yr1_A 87 SEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELA--YG--------E---RIADVRRMTEECS--VWLVVSRHYFDG 151 (257)
T ss_dssp CTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGG--GT--------T---HHHHHHHHHHHTT--CEEEEEEEESSC
T ss_pred ecccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECC--CC--------h---hHHHHHHHHHhCC--CEEEEEecCCCC
Confidence 45678877 56777777778888888 999999542 11 1 2333455444431 4577776 3
Q ss_pred CCCHHHHH----HHHHcCCCEEecCCCCCCCch---HHHHHHh----cCCCEEEEcCC
Q 038230 296 TFYSKVAS----EAVGKGAHIVNDVSAGQLDPD---MYKVVAG----LKVPYVAMHMR 342 (480)
Q Consensus 296 T~~~~v~~----aaL~~G~~iINdVsg~~~d~~---m~~l~~~----~~~~vVlmh~~ 342 (480)
|...+.+. ++.+.|+|++-=+...+...+ ++.+..+ .+.|+|.|.|.
T Consensus 152 tP~~~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG 209 (257)
T 2yr1_A 152 TPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMG 209 (257)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECT
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 55545544 445569999886655442233 3333222 26899999884
No 411
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=57.22 E-value=41 Score=33.97 Aligned_cols=69 Identities=17% Similarity=0.130 Sum_probs=41.4
Q ss_pred HHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHH----HHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHcCCCE
Q 038230 239 QVRLMISEGADMIDIGAQSTRPMATKISAEKELE----RLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGKGAHI 312 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~----rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~G~~i 312 (480)
.|+.++++|||.|++|.. ||... ...... -....|..+.+. .. ||-.|- .++.-+.+||.+||+.
T Consensus 154 ~A~~a~~aGaD~I~Vg~g---~G~~~--~tr~~~g~g~p~l~aI~~~~~~---~~-PVIAdGGI~~~~di~kALa~GAd~ 224 (361)
T 3r2g_A 154 GADYLASCGADIIKAGIG---GGSVC--STRIKTGFGVPMLTCIQDCSRA---DR-SIVADGGIKTSGDIVKALAFGADF 224 (361)
T ss_dssp HHHHHHHTTCSEEEECCS---SSSCH--HHHHHHCCCCCHHHHHHHHTTS---SS-EEEEESCCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHcCCCEEEEcCC---CCcCc--cccccCCccHHHHHHHHHHHHh---CC-CEEEECCCCCHHHHHHHHHcCCCE
Confidence 477888999999999743 33210 000000 011223333333 12 887764 5799999999999998
Q ss_pred EecC
Q 038230 313 VNDV 316 (480)
Q Consensus 313 INdV 316 (480)
+--=
T Consensus 225 V~iG 228 (361)
T 3r2g_A 225 VMIG 228 (361)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8633
No 412
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=57.19 E-value=11 Score=37.51 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=34.9
Q ss_pred EEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHH
Q 038230 216 ILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIP 276 (480)
Q Consensus 216 IlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~ 276 (480)
+||.--|+|.. ...|++++|++.+.++|||.|=+=+. ...+|++++..
T Consensus 164 ~I~ARTDa~~~----~gldeAi~Ra~ay~eAGAD~ifi~~~---------~~~~~~~~i~~ 211 (307)
T 3lye_A 164 VLIARTDALQS----LGYEECIERLRAARDEGADVGLLEGF---------RSKEQAAAAVA 211 (307)
T ss_dssp EEEEEECCHHH----HCHHHHHHHHHHHHHTTCSEEEECCC---------SCHHHHHHHHH
T ss_pred EEEEechhhhc----cCHHHHHHHHHHHHHCCCCEEEecCC---------CCHHHHHHHHH
Confidence 45666778753 35899999999999999999988431 12467776543
No 413
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=56.89 E-value=1.2e+02 Score=30.56 Aligned_cols=94 Identities=12% Similarity=-0.003 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHcCCCEEEeC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC----CHHHHHHHHH--
Q 038230 235 AAVSQVRLMISEGADMIDIG-AQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF----YSKVASEAVG-- 307 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG-~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~----~~~v~~aaL~-- 307 (480)
+..+.|++++++|-..+=++ . |....+.+++++++. ++++... .+++|.+|.. +++.+.+.++
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~-----g~~~~~~~~d~~~v~----avR~a~G-~d~~l~vDan~~~~~~~~A~~~~~~L 224 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCII-----PNDKVSDKEIVAYLR----ELREVIG-WDMDMMVDCLYRWTDWQKARWTFRQL 224 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC-----CCTTSCHHHHHHHHH----HHHHHHC-SSSEEEEECTTCCSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEeccc-----CCCccCHHHHHHHHH----HHHHHhC-CCCeEEEECCCCCCCHHHHHHHHHHH
Confidence 55668999999999999883 2 111124566666654 4444311 3789999953 5554444333
Q ss_pred --cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 --KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 --~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.|..+|-.-......+.+..+.+..++|++.
T Consensus 225 ~~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~ 257 (394)
T 3mqt_A 225 EDIDLYFIEACLQHDDLIGHQKLAAAINTRLCG 257 (394)
T ss_dssp GGGCCSEEESCSCTTCHHHHHHHHHHSSSEEEE
T ss_pred hhcCCeEEECCCCcccHHHHHHHHhhCCCCEEe
Confidence 3899997654322125677777778888876
No 414
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=56.79 E-value=44 Score=33.62 Aligned_cols=92 Identities=12% Similarity=0.145 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.++|++.++++.+.|.++|+ |...|. .-+.+.+ |++. .++||+.|= ++++-++.+++.
T Consensus 205 ~~~~~A~~~~~~l~~~~i~~iE---qP~~~~-----d~~~~~~-------l~~~---~~iPIa~dE~~~~~~~~~~~i~~ 266 (383)
T 3i4k_A 205 WDRRTALHYLPILAEAGVELFE---QPTPAD-----DLETLRE-------ITRR---TNVSVMADESVWTPAEALAVVKA 266 (383)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEE---SCSCTT-----CHHHHHH-------HHHH---HCCEEEESTTCSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEE---CCCChh-----hHHHHHH-------HHhh---CCCCEEecCccCCHHHHHHHHHc
Confidence 5789999999999999999998 322221 1123333 3433 378999984 578888999987
Q ss_pred C-CCEEecCCC----C-CCCchHHHHHHhcCCCEEEEcC
Q 038230 309 G-AHIVNDVSA----G-QLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 309 G-~~iINdVsg----~-~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
| +++|| +.- + +.--+++.+|..+|.++++-++
T Consensus 267 ~~~d~v~-~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~ 304 (383)
T 3i4k_A 267 QAADVIA-LKTTKHGGLLESKKIAAIAEAGGLACHGATS 304 (383)
T ss_dssp TCCSEEE-ECTTTTTSHHHHHHHHHHHHHTTCEEEECCS
T ss_pred CCCCEEE-EcccccCCHHHHHHHHHHHHHcCCeEEeCCC
Confidence 5 78887 321 1 1114688889999999887544
No 415
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=56.65 E-value=28 Score=35.63 Aligned_cols=60 Identities=22% Similarity=0.141 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCC-------------CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQS-------------TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD 295 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eS-------------trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID 295 (480)
++..+.|+..+++|.|.|+|++.- .|...-.-|.+...+.+..+|+++++... +-||+|.
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg--~~~V~vR 243 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIG--ADRVGVR 243 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC--GGGEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhC--CCcEEEE
Confidence 455677788889999999999741 12221123556777788899999987631 1266664
No 416
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=56.60 E-value=93 Score=31.26 Aligned_cols=125 Identities=14% Similarity=0.044 Sum_probs=73.2
Q ss_pred HHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHc----CCCEEecCCCCC-------CCc-----------hHHHHHH
Q 038230 273 RLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGK----GAHIVNDVSAGQ-------LDP-----------DMYKVVA 330 (480)
Q Consensus 273 rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~----G~~iINdVsg~~-------~d~-----------~m~~l~~ 330 (480)
++..+++..++.. -..-.+..++.+.+++.+++ +.++|-.++.+. .-. -+..+++
T Consensus 8 ~~~~ll~~A~~~~---yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~~g~~~~~~v~g~~~~a~~v~~~A~ 84 (349)
T 3elf_A 8 VYAEMLGQAKQNS---YAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFTHVIAA 84 (349)
T ss_dssp HHHHHHHHHHHTT---CCEEEEECCSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcC---ceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhcCcchhhhhhhhHHHHHHHHHHHHH
Confidence 4445566666651 35568888999888877764 888887776321 000 1234566
Q ss_pred hcCCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhc----
Q 038230 331 GLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGL---- 406 (480)
Q Consensus 331 ~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l---- 406 (480)
+|++||++--+.|.-.. .+..+....+...+.+..+.+.|++ .+-+|- -....++|+++-+++
T Consensus 85 ~~~VPVaLHlDHg~~~~--------ld~~~~~~l~~~~~~i~~~i~~GFt--SVMiDg---S~lp~eENi~~Tk~vv~~a 151 (349)
T 3elf_A 85 KYPVNVALHTDHCPKDK--------LDSYVRPLLAISAQRVSKGGNPLFQ--SHMWDG---SAVPIDENLAIAQELLKAA 151 (349)
T ss_dssp TSSSCEEEEECCCCGGG--------GGGTHHHHHHHHHHHHHTTCCCSCS--EEEECC---TTSCHHHHHHHHHHHHHHH
T ss_pred HCCCCEEEECCCCCCcc--------cchhhhhhHHHHHHHHHHHhhcCCC--EEEecC---CCCCHHHHHHHHHHHHHHH
Confidence 78999877434442110 1122333333444555555566776 788883 445678888887776
Q ss_pred ccCCCcE
Q 038230 407 AASHAPI 413 (480)
Q Consensus 407 ~~~g~Pi 413 (480)
+..|+.+
T Consensus 152 h~~gvsV 158 (349)
T 3elf_A 152 AAAKIIL 158 (349)
T ss_dssp HHTTCEE
T ss_pred HHcCCeE
Confidence 3345554
No 417
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=56.33 E-value=91 Score=31.58 Aligned_cols=105 Identities=12% Similarity=0.003 Sum_probs=65.5
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCC-------------CCCCCC--CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGA-------------QSTRPM--ATKISAEKELERLIPVLEAVLTMPEMEGKLVSV 294 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~-------------eStrP~--a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI 294 (480)
..++++..+.|++++++|-..+=+-. ....|. ...++ .+.++.....|+++++... .+++|.|
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~-~~~~~~~~e~v~avR~avG-~d~~l~v 218 (409)
T 3go2_A 141 VTDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVD-RKVLRNLRAHLEALRDGAG-PDVEILL 218 (409)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCC-HHHHHHHHHHHHHHHHHHC-TTSEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccc-hHHHHHHHHHHHHHHHHhC-CCCEEEE
Confidence 35789999999999999999987643 001111 11122 2345555666777776532 3789999
Q ss_pred eC---CCHHHHHHHHH----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 295 DT---FYSKVASEAVG----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 295 DT---~~~~v~~aaL~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
|. ++++.+.+.++ .|..+|-.- . ...+.+..+.+..++|+++
T Consensus 219 DaN~~~~~~~A~~~~~~L~~~~i~~iE~P-~-~d~~~~~~l~~~~~iPIa~ 267 (409)
T 3go2_A 219 DLNFNAKPEGYLKILRELADFDLFWVEID-S-YSPQGLAYVRNHSPHPISS 267 (409)
T ss_dssp ECTTCSCHHHHHHHHHHTTTSCCSEEECC-C-SCHHHHHHHHHTCSSCEEE
T ss_pred ECCCCCCHHHHHHHHHHHhhcCCeEEEeC-c-CCHHHHHHHHhhCCCCEEe
Confidence 95 34544433333 388888732 2 2125677777778888886
No 418
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=56.22 E-value=51 Score=33.16 Aligned_cols=94 Identities=15% Similarity=0.096 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHH---HH
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVAS---EA 305 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~---aa 305 (480)
++++.++.|++++++|-..+-+-... -+.+++++++.. +++.. .+++|.+|. ++++.+. .+
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~-------~~~~~d~~~v~a----vR~a~--~~~~l~vDan~~~~~~~A~~~~~~ 214 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGF-------RDHAFDIMRLEL----IARDF--PEFRVRVDYNQGLEIDEAVPRVLD 214 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSS-------SCHHHHHHHHHH----HHHHC--TTSEEEEECTTCCCGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC-------CCHHHHHHHHHH----HHHhC--CCCeEEEECCCCCCHHHHHHHHHH
Confidence 67888999999999999998875321 124567777544 44432 378999994 3343332 23
Q ss_pred HH-cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 306 VG-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 306 L~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
|+ .|..+|-+--.....+.+..+.++.++|++.
T Consensus 215 L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~ 248 (385)
T 3i6e_A 215 VAQFQPDFIEQPVRAHHFELMARLRGLTDVPLLA 248 (385)
T ss_dssp HHTTCCSCEECCSCTTCHHHHHHHHTTCSSCEEE
T ss_pred HHhcCCCEEECCCCcccHHHHHHHHHhCCCCEEE
Confidence 33 4888887654322125677777778888886
No 419
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=56.20 E-value=31 Score=36.85 Aligned_cols=68 Identities=12% Similarity=0.148 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-eCCCHHHHHHHHHcCCCE
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV-DTFYSKVASEAVGKGAHI 312 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI-DT~~~~v~~aaL~~G~~i 312 (480)
++..+++..++++|+|+|-|-.. .-.+ +.+...++.|++.. .+++|.. .--.++.+++-+++|||.
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~a--hGhs---------~~v~~~i~~ik~~~--p~~~viaGNVaT~e~a~~Li~aGAD~ 346 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSS--QGNS---------VYQIEFIKWIKQTY--PKIDVIAGNVVTREQAAQLIAAGADG 346 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCS--CCCS---------HHHHHHHHHHHHHC--TTSEEEEEEECSHHHHHHHHHHTCSE
T ss_pred ccHHHHHHHHHhcCCcEEEEecc--cccc---------HHHHHHHHHHHhhC--CcceEEeccccCHHHHHHHHHcCCCE
Confidence 35788999999999999999642 2111 23445566666653 3666544 777788888888999998
Q ss_pred Ee
Q 038230 313 VN 314 (480)
Q Consensus 313 IN 314 (480)
|-
T Consensus 347 vk 348 (556)
T 4af0_A 347 LR 348 (556)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 420
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=56.19 E-value=95 Score=30.66 Aligned_cols=95 Identities=16% Similarity=0.215 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHH---
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEA--- 305 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aa--- 305 (480)
++++..+.|++++++|-+.|.+-... + +.+++.+++ +++++... .+++|.+|. ++++.+.+.
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~--~-----~~~~d~~~v----~avr~a~g-~~~~l~vDan~~~~~~~a~~~~~~ 207 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGK--D-----DIATDIARI----QEIRKRVG-SAVKLRLDANQGWRPKEAVTAIRK 207 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCS--S-----CHHHHHHHH----HHHHHHHC-SSSEEEEECTTCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCC--C-----CHHHHHHHH----HHHHHHhC-CCCeEEEECCCCCCHHHHHHHHHH
Confidence 67888999999999999999986421 1 345556655 44443211 278999995 454443222
Q ss_pred H-H--cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 306 V-G--KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 306 L-~--~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
| + .|..+|-+--.....+.+..+.+..+++++.
T Consensus 208 l~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~ 243 (366)
T 1tkk_A 208 MEDAGLGIELVEQPVHKDDLAGLKKVTDATDTPIMA 243 (366)
T ss_dssp HHHTTCCEEEEECCSCTTCHHHHHHHHHHCSSCEEE
T ss_pred HhhcCCCceEEECCCCcccHHHHHHHHhhCCCCEEE
Confidence 3 3 4778887644322125677777788888886
No 421
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=56.02 E-value=20 Score=36.65 Aligned_cols=92 Identities=10% Similarity=-0.016 Sum_probs=64.5
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVG 307 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~ 307 (480)
-.+.++|++.++++.+.|.++|+. |. ..-+.+ +.|++. +++||+.|= +++..++.+++
T Consensus 223 ~~~~~~A~~~~~~L~~~~i~~iE~------P~----~d~~~~-------~~l~~~---~~iPIa~dE~~~~~~~~~~~i~ 282 (409)
T 3go2_A 223 NAKPEGYLKILRELADFDLFWVEI------DS----YSPQGL-------AYVRNH---SPHPISSCETLFGIREFKPFFD 282 (409)
T ss_dssp CSCHHHHHHHHHHTTTSCCSEEEC------CC----SCHHHH-------HHHHHT---CSSCEEECTTCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCCeEEEe------Cc----CCHHHH-------HHHHhh---CCCCEEeCCCcCCHHHHHHHHH
Confidence 358899999999999999999993 32 111223 444555 489999984 46788889998
Q ss_pred cC-CCEEec-CC-CC-CCCchHHHHHHhcCCCEEEEcCC
Q 038230 308 KG-AHIVND-VS-AG-QLDPDMYKVVAGLKVPYVAMHMR 342 (480)
Q Consensus 308 ~G-~~iINd-Vs-g~-~~d~~m~~l~~~~~~~vVlmh~~ 342 (480)
.| +++||= ++ |+ +.--+++.+|..+|.+++. |+-
T Consensus 283 ~~~~d~v~~k~~~GGit~~~~ia~~A~~~gi~~~~-h~~ 320 (409)
T 3go2_A 283 ANAVDVAIVDTIWNGVWQSMKIAAFADAHDINVAP-HNF 320 (409)
T ss_dssp TTCCSEEEECHHHHCHHHHHHHHHHHHHTTCEEEE-CCC
T ss_pred hCCCCEEEeCCCCCCHHHHHHHHHHHHHcCCEEee-cCC
Confidence 85 788761 11 22 1114688999999999985 763
No 422
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=55.98 E-value=25 Score=32.60 Aligned_cols=84 Identities=14% Similarity=0.075 Sum_probs=50.1
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCC
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVS 317 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVs 317 (480)
++++..++.|||++-.|.. . . ++++..++. ++++-+-..+++.+.+|++.|+|+|-=..
T Consensus 79 d~~~~A~~aGAd~v~~p~~--d---------~------~v~~~~~~~----g~~~i~G~~t~~e~~~A~~~Gad~v~~Fp 137 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISPGL--T---------E------PLLKAATEG----TIPLIPGISTVSELMLGMDYGLKEFKFFP 137 (214)
T ss_dssp HHHHHHHHHTCSCEEESSC--C---------H------HHHHHHHHS----SSCEEEEESSHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHcCCCEEEcCCC--C---------H------HHHHHHHHh----CCCEEEecCCHHHHHHHHHCCCCEEEEec
Confidence 5677888899999987731 1 1 233444443 45554456779999999999999886433
Q ss_pred CCCC-CchHHHHHHh-c-CCCEEEEcCCCC
Q 038230 318 AGQL-DPDMYKVVAG-L-KVPYVAMHMRGD 344 (480)
Q Consensus 318 g~~~-d~~m~~l~~~-~-~~~vVlmh~~g~ 344 (480)
+... -.++++-++. . +.++ |...|+
T Consensus 138 a~~~gG~~~lk~i~~~~~~ipv--vaiGGI 165 (214)
T 1wbh_A 138 AEANGGVKALQAIAGPFSQVRF--CPTGGI 165 (214)
T ss_dssp TTTTTHHHHHHHHHTTCTTCEE--EEBSSC
T ss_pred CccccCHHHHHHHhhhCCCCeE--EEECCC
Confidence 2211 1344444433 3 4444 455665
No 423
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=55.97 E-value=50 Score=33.42 Aligned_cols=94 Identities=10% Similarity=0.108 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHH---H
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEA---V 306 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aa---L 306 (480)
+++..+.|+++++.|-..+-+-... +.+++++++. ++++... .+++|.||. ++++.+.+. |
T Consensus 156 ~e~~~~~a~~~~~~G~~~iKlK~g~--------~~~~d~~~v~----avR~a~g-~~~~l~vDaN~~~~~~~A~~~~~~L 222 (392)
T 3ddm_A 156 PENPEDVVARKAAEGYRAFKLKVGF--------DDARDVRNAL----HVRELLG-AATPLMADANQGWDLPRARQMAQRL 222 (392)
T ss_dssp SSSHHHHHHHHHHHTCCCEEEECSS--------CHHHHHHHHH----HHHHHHC-SSSCEEEECTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCC--------CHHHHHHHHH----HHHHhcC-CCceEEEeCCCCCCHHHHHHHHHHH
Confidence 3668889999999999998886421 3566777654 4444311 378999995 455544433 3
Q ss_pred H-cCCCEEecCCCCCC-CchHHHHHHhcCCCEEEE
Q 038230 307 G-KGAHIVNDVSAGQL-DPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 307 ~-~G~~iINdVsg~~~-d~~m~~l~~~~~~~vVlm 339 (480)
+ .|..+|-+-..... .+.+..+.+..++|++.-
T Consensus 223 ~~~~i~~iEeP~~~~d~~~~~~~l~~~~~iPIa~d 257 (392)
T 3ddm_A 223 GPAQLDWLEEPLRADRPAAEWAELAQAAPMPLAGG 257 (392)
T ss_dssp GGGCCSEEECCSCTTSCHHHHHHHHHHCSSCEEEC
T ss_pred HHhCCCEEECCCCccchHHHHHHHHHhcCCCEEeC
Confidence 3 38999987554322 245777777889998873
No 424
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=55.78 E-value=65 Score=35.98 Aligned_cols=146 Identities=13% Similarity=0.162 Sum_probs=74.4
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCC---CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC----CCHHHHHHHHHcCC
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMAT---KISAEKELERLIPVLEAVLTMPEMEGKLVSVDT----FYSKVASEAVGKGA 310 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~---~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT----~~~~v~~aaL~~G~ 310 (480)
+.++.+.++|+++|=|=-.+-+-+.. ..+.++..++.+.+++.+.+..+ .+..|.+=. ++. ..-.+.++
T Consensus 620 ~Ei~~L~~AG~r~IQiDEPal~e~l~~r~g~d~~~~l~~av~a~n~a~~g~p-~d~~I~tHiC~Gnf~~---~~I~~l~a 695 (789)
T 3ppg_A 620 DEVNDLEGAGITVIQVDEPAIREGLPLRAGKERSDYLNWAAQSFRVATSGVE-NSTQIHSHFCYSDLDP---NHIKALDA 695 (789)
T ss_dssp HHHHHHHHTTCCEEEEECTTTGGGSCSSSSHHHHHHHHHHHHHHHHHHSSSC-TTSEEEEECC---CCH---HHHHHHCC
T ss_pred HHHHHHHHcCCCEEEEcccchhhcccccccCCHHHHHHHHHHHHHHHHhcCC-CCcEEEEeccCCCCCh---hHHHhCCC
Confidence 45677889999999887544332221 12345556667777776665422 244444322 222 22234577
Q ss_pred CEEecCC-CCCCCchHHHHHHhcCCCEEE----EcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 038230 311 HIVNDVS-AGQLDPDMYKVVAGLKVPYVA----MHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRII 385 (480)
Q Consensus 311 ~iINdVs-g~~~d~~m~~l~~~~~~~vVl----mh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Ii 385 (480)
|.+. +- ....+-+.+..+++++-.|++ .|+.-.| + . +.+.++++++.+. ++.++++
T Consensus 696 D~is-lE~~~Rs~~e~L~~~~~~~k~V~lGVvds~sp~vE------------s-~----EeV~~rI~~a~~~-v~~erL~ 756 (789)
T 3ppg_A 696 DVVS-IEFSKKDDPNYIQEFSEYPNHIGLGLFDIHSPRIP------------S-K----QEFVSRIEEILKV-YPASKFW 756 (789)
T ss_dssp SEEE-EC---------CGGGGGCCSEEEEC-------CCC------------C-H----HHHHHHHHHHTTT-SCGGGEE
T ss_pred CEEE-EecCCCcchHHHHHHHhcCCeEEeeeecCCCCCCC------------C-H----HHHHHHHHHHHHh-cCcccEE
Confidence 7764 22 111112344445556554443 2221111 1 1 3445777777655 7778999
Q ss_pred EecCCCCc-cChhHHHHHHHhc
Q 038230 386 IDPGLGFS-KKAEHNLDILLGL 406 (480)
Q Consensus 386 lDPgiGf~-k~~~~~~~~lr~l 406 (480)
+.|--||+ -+.+.....|+++
T Consensus 757 lsPdCGl~t~~~~~a~akL~~m 778 (789)
T 3ppg_A 757 VNPDCGLKTRGWPEVKESLTNM 778 (789)
T ss_dssp ECCSCC---CCHHHHHHHHHHH
T ss_pred EeCCCCCCCCCHHHHHHHHHHH
Confidence 99988885 3444555555554
No 425
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=55.64 E-value=25 Score=36.05 Aligned_cols=96 Identities=16% Similarity=0.228 Sum_probs=59.7
Q ss_pred CHHHHHHHH-HHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHH--HHHHHHc
Q 038230 232 SVEAAVSQV-RLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKV--ASEAVGK 308 (480)
Q Consensus 232 ~~e~a~~~A-~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v--~~aaL~~ 308 (480)
+..+.+++. +++.+..++|+ |+..||.+..+ +..+++. ++++.+.. .-.|+=.++++.. +++++++
T Consensus 119 ~~~e~i~~~~k~~~~~~~~Vv-vn~asTE~ylp-vgs~~~~------~~a~~~~~---~~~i~as~~YA~AAl~~aa~~a 187 (394)
T 3cin_A 119 TLKEAVDTLVKEWTELDPDVI-VNTCTTEAFVP-FGNKEDL------LKAIENND---KERLTATQVYAYAAALYANKRG 187 (394)
T ss_dssp CHHHHHHHHHHHHHHHCCSEE-EECCCCCCCCC-CSSHHHH------HHHHHTTC---TTTCCHHHHHHHHHHHHHHHHT
T ss_pred hHHHhHHHHHHHhhhccceeE-eeecccccCCC-CCCHHHH------HHHhhccc---cccCChhHHHHHHHHHhhhhhc
Confidence 445555544 56667788877 88889987654 4444433 23444331 2223333333322 2344489
Q ss_pred CCCEEecCCCCCC-CchHHHHHHhcCCCEEE
Q 038230 309 GAHIVNDVSAGQL-DPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 309 G~~iINdVsg~~~-d~~m~~l~~~~~~~vVl 338 (480)
|+..||-+-.+.. +|++.+++++.|++++-
T Consensus 188 G~~fvN~~P~~ia~~P~~~ela~~~gvpi~G 218 (394)
T 3cin_A 188 GAAFVNVIPTFIANDPAFVELAKENNLVVFG 218 (394)
T ss_dssp CEEEEECSSSCSTTCHHHHHHHHHTTEEEEC
T ss_pred CCceecCCCccccCcHHHHHHHHHcCCcEec
Confidence 9999997765543 48999999999999885
No 426
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=55.41 E-value=30 Score=34.13 Aligned_cols=26 Identities=12% Similarity=0.201 Sum_probs=20.5
Q ss_pred CCeEEEe--CCCHHHHHHHHHcCCCEEe
Q 038230 289 GKLVSVD--TFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 289 ~~pISID--T~~~~v~~aaL~~G~~iIN 314 (480)
++||..+ -.+++-+.++|..||+.+.
T Consensus 256 ~ipvia~GGI~~~~d~~kal~~GAd~V~ 283 (332)
T 1vcf_A 256 HLPLVASGGVYTGTDGAKALALGADLLA 283 (332)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred CCeEEEECCCCCHHHHHHHHHhCCChHh
Confidence 4676664 4788889999988998886
No 427
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=55.12 E-value=37 Score=34.20 Aligned_cols=69 Identities=19% Similarity=0.253 Sum_probs=42.7
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHcCCCEEe
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~G~~iIN 314 (480)
+.|+...+.|||.|+|.+-..|......+. ++-+..+.+.+.. ++||-.| -.+++-+.+||..||+.+-
T Consensus 241 e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~---~~~l~~v~~~v~~-----~ipVia~GGI~~g~D~~kalalGAd~V~ 311 (368)
T 2nli_A 241 EDADMAIKRGASGIWVSNHGARQLYEAPGS---FDTLPAIAERVNK-----RVPIVFDSGVRRGEHVAKALASGADVVA 311 (368)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSCSSCCCH---HHHHHHHHHHHTT-----SSCEEECSSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCCCCCCh---HHHHHHHHHHhCC-----CCeEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 346788899999999964322221112222 3333333333331 4666665 4789999999999999885
No 428
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=55.04 E-value=28 Score=34.46 Aligned_cols=92 Identities=10% Similarity=0.124 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHcCCCEEEeCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE---eCCCHHHHHHHHH-cC
Q 038230 235 AAVSQVRLMISEGADMIDIGA-QSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV---DTFYSKVASEAVG-KG 309 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG~-eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI---DT~~~~v~~aaL~-~G 309 (480)
+.++.|.++ .++..-+|+.+ |...| + ++ +.++.+..++. ++++.+ .+..++.+..|++ .|
T Consensus 150 ~~~~~a~~~-~~~vvG~dL~g~E~~~~------~-~~---~~~~~~~A~~~----gl~~~~HagE~~~~~~i~~al~~lg 214 (326)
T 3pao_A 150 KTLDQALPF-RDAFIAVGLDSSEVGHP------P-SK---FQRVFDRARSE----GFLTVAHAGEEGPPEYIWEALDLLK 214 (326)
T ss_dssp HHHHHHGGG-GGGCSEEEEESCCTTCC------G-GG---GHHHHHHHHHT----TCEECEEESSSSCHHHHHHHHHTTC
T ss_pred HHHHHHhhc-cccceeeCCCCCCCCCC------H-HH---HHHHHHHHHHc----CCceeeecCCCCCHHHHHHHHhcCC
Confidence 444555555 34889999965 32222 1 22 34556666664 777766 3456888899996 68
Q ss_pred CCEEecCCCCCCCchHHHHHHhcCCCEEEEcC
Q 038230 310 AHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 310 ~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
++-|-=-.....+++.++.+++.++++++++.
T Consensus 215 ~~rigHgv~l~~d~~l~~~l~~~~i~le~cP~ 246 (326)
T 3pao_A 215 VERIDHGVRAFEDERLMRRLIDEQIPLTVCPL 246 (326)
T ss_dssp CSSEEECGGGGGCHHHHHHHHHHTCCEEECHH
T ss_pred CceeeeeeeecccHHHHHHHHHcCCeEEECch
Confidence 77553221122357899999999999999864
No 429
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=54.89 E-value=59 Score=32.45 Aligned_cols=116 Identities=9% Similarity=0.040 Sum_probs=65.2
Q ss_pred HHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE----------eCCC-------HHHH
Q 038230 240 VRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV----------DTFY-------SKVA 302 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI----------DT~~-------~~v~ 302 (480)
+++.++.|||.+=+=.- -+|..+.--.++..+.+..+.++.++. ++|+-+ |..+ |+.+
T Consensus 116 ve~a~~~GADAVk~lv~-~g~d~~~e~~~~q~~~l~rv~~ec~~~----GiPlllEil~y~~~~~~~~~~~~a~~~p~~V 190 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLY-YDVDGDPQVNVQKQAYIERIGSECQAE----DIPFFLEILTYDETISNNSSVEFAKVKVHKV 190 (332)
T ss_dssp HHHHHHTTCSEEEEEEE-ECTTSCHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEECBTTBSCTTSHHHHTTHHHHH
T ss_pred HHHHHHcCCCEEEEEEE-cCCCchHHHHHHHHHHHHHHHHHHHHc----CCceEEEEeccCCCCCCCcchhhhccCHHHH
Confidence 56667899999876532 122111000013455666666666654 777655 3342 3334
Q ss_pred HH----H--HHcCCCEEecCCCCCCC------------------chHHHHHHhcCCCEEEEcCCCCCCccccccccchhh
Q 038230 303 SE----A--VGKGAHIVNDVSAGQLD------------------PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDD 358 (480)
Q Consensus 303 ~a----a--L~~G~~iINdVsg~~~d------------------~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~ 358 (480)
.. + ++.|+|++---.-++.+ +.+.+++....+|+|++.- |.+
T Consensus 191 ~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsg-G~~------------- 256 (332)
T 3iv3_A 191 NDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSA-GVS------------- 256 (332)
T ss_dssp HHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECT-TCC-------------
T ss_pred HHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECC-CCC-------------
Confidence 44 4 44599998643222110 1266677778899987664 221
Q ss_pred HHHHHHHHHHHHHHHHHHCCC
Q 038230 359 VCKQVASELYSKVRDAELSGI 379 (480)
Q Consensus 359 v~~ev~~~l~~~i~~a~~~Gi 379 (480)
.+.|.+.++.|.++|-
T Consensus 257 -----~~~fl~~v~~A~~aGa 272 (332)
T 3iv3_A 257 -----AELFQETLVFAHKAGA 272 (332)
T ss_dssp -----HHHHHHHHHHHHHHTC
T ss_pred -----HHHHHHHHHHHHHcCC
Confidence 0346677788888886
No 430
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=54.89 E-value=16 Score=36.90 Aligned_cols=25 Identities=24% Similarity=0.303 Sum_probs=17.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCC
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQS 257 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eS 257 (480)
++++.++-++++ ..+||+||||..+
T Consensus 162 ~~~dy~~~~~~~-~~~ad~ielNisC 186 (367)
T 3zwt_A 162 AAEDYAEGVRVL-GPLADYLVVNVSS 186 (367)
T ss_dssp HHHHHHHHHHHH-GGGCSEEEEECCC
T ss_pred CHHHHHHHHHHH-hhhCCEEEEECCC
Confidence 456666655554 5789999999754
No 431
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=54.69 E-value=1.3e+02 Score=30.36 Aligned_cols=94 Identities=6% Similarity=-0.049 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHcCCCEEEeC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC----CHHHHHHHHH--
Q 038230 235 AAVSQVRLMISEGADMIDIG-AQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF----YSKVASEAVG-- 307 (480)
Q Consensus 235 ~a~~~A~~~v~~GAdiIDIG-~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~----~~~v~~aaL~-- 307 (480)
+..+.|++++++|-..+=+. . |....+.+++++++. ++++... .+++|.+|.. +++.+.+.++
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~-----g~~~~~~~~d~e~v~----avR~a~G-~d~~l~vDaN~~~~~~~~A~~~~~~L 229 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVP-----IKADWSTKEVAYYLR----ELRGILG-HDTDMMVDYLYRFTDWYEVARLLNSI 229 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC-----TTCCCCHHHHHHHHH----HHHHHHC-SSSEEEEECTTCCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEeCcc-----CCCccCHHHHHHHHH----HHHHHhC-CCCeEEEeCCCCCCCHHHHHHHHHHh
Confidence 55668999999999999883 2 111134566676654 4444321 3789999953 5555444433
Q ss_pred --cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 --KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 --~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
.|..+|-.-......+.+..+.+..++|++.
T Consensus 230 ~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~ 262 (394)
T 3mkc_A 230 EDLELYFAEATLQHDDLSGHAKLVENTRSRICG 262 (394)
T ss_dssp GGGCCSEEESCSCTTCHHHHHHHHHHCSSCBEE
T ss_pred hhcCCeEEECCCCchhHHHHHHHHhhCCCCEEe
Confidence 3888987654322125677777788888876
No 432
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=54.66 E-value=77 Score=31.56 Aligned_cols=93 Identities=11% Similarity=0.124 Sum_probs=59.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-+.|.+-... | +.+++.+ .++++++... .+++|.+|.. +++.+.+.++
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~--~-----~~~~~~e----~v~avr~a~g-~~~~l~vDan~~~~~~~a~~~~~ 211 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGG--S-----DPAQDIA----RIEAISAGLP-DGHRVTFDVNRAWTPAIAVEVLN 211 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCS--S-----CHHHHHH----HHHHHHHSCC-TTCEEEEECTTCCCHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCC--C-----ChHHHHH----HHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHH
Confidence 367889999999999999999986421 1 2334444 4566676532 2789999954 4554444333
Q ss_pred ---cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 ---KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ---~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+|. +|-+--. ..+.+..+.+..++|++.
T Consensus 212 ~l~~~i-~iEqP~~--d~~~~~~l~~~~~iPI~~ 242 (378)
T 2qdd_A 212 SVRARD-WIEQPCQ--TLDQCAHVARRVANPIML 242 (378)
T ss_dssp SCCCCC-EEECCSS--SHHHHHHHHTTCCSCEEE
T ss_pred HhCCCc-EEEcCCC--CHHHHHHHHHhCCCCEEE
Confidence 366 6654322 125566676677888886
No 433
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=54.33 E-value=88 Score=31.45 Aligned_cols=93 Identities=17% Similarity=0.154 Sum_probs=62.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEE-EeCC---CHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVS-VDTF---YSKVASEAV 306 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pIS-IDT~---~~~v~~aaL 306 (480)
.++++..+.|++++++|-..+-+-... +.+++++++..+-+.+- .+++|. ||.. +++.+.+.+
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~--------~~~~d~~~v~avR~a~g-----~~~~l~~vDan~~~~~~~A~~~~ 207 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGK--------NLDADEEFLSRVKEEFG-----SRVRIKSYDFSHLLNWKDAHRAI 207 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSS--------CHHHHHHHHHHHHHHHG-----GGCEEEEEECTTCSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCC--------CHHHHHHHHHHHHHHcC-----CCCcEEEecCCCCcCHHHHHHHH
Confidence 468899999999999999999886421 35677777654443332 267899 9964 455544333
Q ss_pred H----cCC--CEEecCCCCCCCchHHHHHHhcCCCE
Q 038230 307 G----KGA--HIVNDVSAGQLDPDMYKVVAGLKVPY 336 (480)
Q Consensus 307 ~----~G~--~iINdVsg~~~d~~m~~l~~~~~~~v 336 (480)
+ .|. .+|-+--.....+.+..+.+..++++
T Consensus 208 ~~l~~~~i~~~~iEqP~~~~d~~~~~~l~~~~~iPI 243 (391)
T 3gd6_A 208 KRLTKYDLGLEMIESPAPRNDFDGLYQLRLKTDYPI 243 (391)
T ss_dssp HHHTTCCSSCCEEECCSCTTCHHHHHHHHHHCSSCE
T ss_pred HHHHhcCCCcceecCCCChhhHHHHHHHHHHcCCCc
Confidence 3 388 88876543221256777878888887
No 434
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=54.06 E-value=13 Score=37.97 Aligned_cols=26 Identities=19% Similarity=0.118 Sum_probs=18.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCC
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQS 257 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eS 257 (480)
+.+...+.+++..+.|++.|+|+...
T Consensus 158 d~~~~~~~~~ra~~~G~~al~itvd~ 183 (392)
T 2nzl_A 158 DREVTKKLVRQAEKMGYKAIFVTVDT 183 (392)
T ss_dssp SHHHHHHHHHHHHHTTCCCEEEECSC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45555666666678999999997644
No 435
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=53.98 E-value=1.6e+02 Score=28.50 Aligned_cols=99 Identities=13% Similarity=0.137 Sum_probs=60.6
Q ss_pred CCeEEEe----CCC-HHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCccccccccchhhHHHHH
Q 038230 289 GKLVSVD----TFY-SKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDVCKQV 363 (480)
Q Consensus 289 ~~pISID----T~~-~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev 363 (480)
++.+-++ ... .+.++.+++.|+++|- +.++. ..++++.+++++.+++.... +.
T Consensus 71 ~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~-~~~g~-p~~~~~~l~~~gi~vi~~v~-----t~--------------- 128 (328)
T 2gjl_A 71 GVNLTLLPTQKPVPYAEYRAAIIEAGIRVVE-TAGND-PGEHIAEFRRHGVKVIHKCT-----AV--------------- 128 (328)
T ss_dssp EEEEEECCCSSCCCHHHHHHHHHHTTCCEEE-EEESC-CHHHHHHHHHTTCEEEEEES-----SH---------------
T ss_pred EEEEeccccccCccHHHHHHHHHhcCCCEEE-EcCCC-cHHHHHHHHHcCCCEEeeCC-----CH---------------
Confidence 3445555 222 4788899999999886 43332 36788888899888874321 10
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEecC-CC-C-ccChhHHHHHHHhc-ccCCCcEEEe
Q 038230 364 ASELYSKVRDAELSGIPAWRIIIDPG-LG-F-SKKAEHNLDILLGL-AASHAPILIG 416 (480)
Q Consensus 364 ~~~l~~~i~~a~~~Gi~~~~IilDPg-iG-f-~k~~~~~~~~lr~l-~~~g~Pil~G 416 (480)
+....+.+.|.+ -|+++.. .| . +.....++++++++ +..++|++++
T Consensus 129 -----~~a~~~~~~GaD--~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaa 178 (328)
T 2gjl_A 129 -----RHALKAERLGVD--AVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIAS 178 (328)
T ss_dssp -----HHHHHHHHTTCS--EEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEE
T ss_pred -----HHHHHHHHcCCC--EEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEE
Confidence 112346778986 7888741 12 1 11112457778877 3468998763
No 436
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=53.92 E-value=26 Score=33.95 Aligned_cols=82 Identities=9% Similarity=-0.070 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCC----------CCCCCC------CCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE-
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQS----------TRPMAT------KISAEKELERLIPVLEAVLTMPEMEGKLVSV- 294 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eS----------trP~a~------~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI- 294 (480)
+.+++.+.|+.+.+.|||.|.+-.-. .+|... ..+.......-...++.+++... .++||..
T Consensus 170 ~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~-~~ipvi~~ 248 (311)
T 1jub_A 170 DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLK-PEIQIIGT 248 (311)
T ss_dssp SHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSC-TTSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcC-CCCCEEEE
Confidence 56778888999999999999885311 001000 00000001112345666666521 1567665
Q ss_pred -eCCCHHHHHHHHHcCCCEEe
Q 038230 295 -DTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 295 -DT~~~~v~~aaL~~G~~iIN 314 (480)
+-.+++.+++++.+||+.+-
T Consensus 249 GGI~~~~da~~~l~~GAd~V~ 269 (311)
T 1jub_A 249 GGIETGQDAFEHLLCGATMLQ 269 (311)
T ss_dssp SSCCSHHHHHHHHHHTCSEEE
T ss_pred CCCCCHHHHHHHHHcCCCEEE
Confidence 44678888888888888774
No 437
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=53.85 E-value=1.5e+02 Score=30.88 Aligned_cols=168 Identities=14% Similarity=0.102 Sum_probs=87.7
Q ss_pred HHHHHHHHHHcCCcCCC---CeEEEeCCC----------------HHHHHHHHHcCCC-EEecCCCCCCCc---------
Q 038230 273 RLIPVLEAVLTMPEMEG---KLVSVDTFY----------------SKVASEAVGKGAH-IVNDVSAGQLDP--------- 323 (480)
Q Consensus 273 rl~~vi~~l~~~~~~~~---~pISIDT~~----------------~~v~~aaL~~G~~-iINdVsg~~~d~--------- 323 (480)
.+...++.+.+... .+ +.|-+|=.. .+.+++|+++|.. +--|-|....++
T Consensus 70 ~f~~~V~~~A~~~~-vPv~pV~LhlDHg~~~~w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p~eeNi~lt~evv 148 (450)
T 3txv_A 70 DFTRFVGAIADRIE-FPREKILLGGDHLGPNPWKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGCAGEPTALPDATT 148 (450)
T ss_dssp HHHHHHHHHHHHTT-CCGGGEEEEEEEESSGGGTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCCSSSCSBCCHHHH
T ss_pred HHHHHHHHHHHHcC-cCcccEEEECCCCCCcccccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCchhhccchhHHHH
Confidence 34445555554321 12 346789876 5899999999976 444555543332
Q ss_pred -----hHHHHHHhcCC-------CEEEEcCCCCCCccc-cccccchhhHHHHHHHHHHHHHHHHHHCCCC----C-CCEE
Q 038230 324 -----DMYKVVAGLKV-------PYVAMHMRGDPSTMQ-NEENLQYDDVCKQVASELYSKVRDAELSGIP----A-WRII 385 (480)
Q Consensus 324 -----~m~~l~~~~~~-------~vVlmh~~g~p~~~~-~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~----~-~~Ii 385 (480)
++.++|.+++. .+|+=+..+.|...+ ......|.+ .++..+|++.....+.+.|++ + --++
T Consensus 149 a~rtaeL~~~A~~~~~~~g~~e~~yviGtEvpvpGGa~~~~~~~~~T~-PeeA~~fv~~~~~~f~~~gld~~w~~v~~lv 227 (450)
T 3txv_A 149 AARAARLAAVAEDAVGGRGGVLPVYIIGTEVPIPGGALEELDTLEVTA-PEAAIETVRVHRAAFEEAGAAGAFSRVVGAV 227 (450)
T ss_dssp HHHHHHHHHHHHHTC------CCEEEEECC-------------CCCCC-HHHHHHHHHHHHHHHHHHTCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHhhcCCCCceEEeeeecCCCCccccccccCCCCC-HHHHHHHHHHHHHHHHHhCcccccCceeEEE
Confidence 23466666432 345544332222100 000111212 244556777777777889993 1 1256
Q ss_pred EecCCCCccCh--hHHHHHHHhc-ccC-CCc-EEE-eeccccccccccCCCCcCcccHHHHHHHHHHHHcCCcEEEcCC
Q 038230 386 IDPGLGFSKKA--EHNLDILLGL-AAS-HAP-ILI-GPSRKRFLGEICNRPSADERDPATIASITAGVLGGANIVRVHN 458 (480)
Q Consensus 386 lDPgiGf~k~~--~~~~~~lr~l-~~~-g~P-il~-G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~IlRvHd 458 (480)
+-||+.|+... .-+++.++.| +.. ++| +++ |+|= -|.+ -.....++..|..++.|=-
T Consensus 228 VqpGt~f~~~~v~~y~~e~~~~L~~~v~~~P~LVlhghSt-------Dy~~---------~e~l~~~V~~GiaklNVgp 290 (450)
T 3txv_A 228 VQPGVEFGNENVIAYDRARAEKLSATLGQLHGMVFEAHST-------DYQT---------PDALRELVADGFAILKVGP 290 (450)
T ss_dssp CCCSCEECSSCEECCCTTTTSHHHHGGGTSTTCEEEESCC-------TTCC---------HHHHHHHHHTTEEEEEECH
T ss_pred ecCCcccCCCCCCCCCHHHHHHHHHHhccCCCEEEecCCC-------CCCC---------HHHHHHHHHcCCcEEEECh
Confidence 88999886321 2224444444 223 788 655 6650 0121 1224678889999999843
No 438
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=53.74 E-value=18 Score=37.03 Aligned_cols=90 Identities=8% Similarity=0.007 Sum_probs=62.5
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVG 307 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~ 307 (480)
-.+.++|++.++++.+.|.++|+= ...|. .++ ....|++. +++||+.|= +++..++.+++
T Consensus 211 ~~~~~~A~~~~~~L~~~~i~~iEe---P~~~~--------d~~----~~~~l~~~---~~iPIa~dE~~~~~~~~~~~i~ 272 (412)
T 4e4u_A 211 QMVPSSAIRLAKRLEKYDPLWFEE---PVPPG--------QEE----AIAQVAKH---TSIPIATGERLTTKYEFHKLLQ 272 (412)
T ss_dssp CBCHHHHHHHHHHHGGGCCSEEEC---CSCSS--------CHH----HHHHHHHT---CSSCEEECTTCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhcCCcEEEC---CCChh--------hHH----HHHHHHhh---CCCCEEecCccCCHHHHHHHHH
Confidence 468899999999999999999982 22221 122 23444555 489999984 46778889998
Q ss_pred cC-CCEEecCCCC-----CCCchHHHHHHhcCCCEEE
Q 038230 308 KG-AHIVNDVSAG-----QLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ~G-~~iINdVsg~-----~~d~~m~~l~~~~~~~vVl 338 (480)
.| +++|| +.-. +.--+++.+|..+|.+++.
T Consensus 273 ~~a~d~v~-~d~~~~GGit~~~kia~~A~~~gi~v~~ 308 (412)
T 4e4u_A 273 AGGASILQ-LNVARVGGLLEAKKIATLAEVHYAQIAP 308 (412)
T ss_dssp TTCCSEEC-CCTTTTTSHHHHHHHHHHHHHTTCEECC
T ss_pred cCCCCEEE-eCccccCCHHHHHHHHHHHHHcCCEEEe
Confidence 85 88887 3211 1114688999999999754
No 439
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=53.72 E-value=15 Score=37.90 Aligned_cols=92 Identities=9% Similarity=-0.005 Sum_probs=63.2
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVG 307 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~ 307 (480)
-.+.++|++.++++.+.|.++|+= ...|. .++. .+.|++. +++||+.| -+++..++.+++
T Consensus 213 ~~t~~~A~~~~~~Le~~~i~~iEe---P~~~~--------~~~~----~~~l~~~---~~iPIa~dE~~~~~~~~~~~l~ 274 (433)
T 3rcy_A 213 QFTTAGAIRLGQAIEPYSPLWYEE---PVPPD--------NVGA----MAQVARA---VRIPVATGERLTTKAEFAPVLR 274 (433)
T ss_dssp CBCHHHHHHHHHHHGGGCCSEEEC---CSCTT--------CHHH----HHHHHHH---SSSCEEECTTCCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhcCCCEEEC---CCChh--------hHHH----HHHHHhc---cCCCEEecCCCCCHHHHHHHHH
Confidence 357899999999999999999982 22221 1222 2334444 47999998 357889999999
Q ss_pred cC-CCEEecCC----C-CCCCchHHHHHHhcCCCEEEEcC
Q 038230 308 KG-AHIVNDVS----A-GQLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 308 ~G-~~iINdVs----g-~~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
.| +|+|| +. | .+.-.+++.+|..+|++++. |.
T Consensus 275 ~g~~D~v~-~d~~~~GGit~~~kia~lA~~~gv~~~~-h~ 312 (433)
T 3rcy_A 275 EGAAAILQ-PALGRAGGIWEMKKVAAMAEVYNAQMAP-HL 312 (433)
T ss_dssp TTCCSEEC-CCHHHHTHHHHHHHHHHHHHTTTCEECC-CC
T ss_pred cCCCCEEE-eCchhcCCHHHHHHHHHHHHHcCCEEEe-cC
Confidence 85 88887 32 1 11114688999999998764 53
No 440
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=53.55 E-value=47 Score=32.82 Aligned_cols=81 Identities=17% Similarity=0.219 Sum_probs=52.3
Q ss_pred CCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCc-CCCCeEEE---eCCCH--
Q 038230 226 DGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPE-MEGKLVSV---DTFYS-- 299 (480)
Q Consensus 226 dgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~-~~~~pISI---DT~~~-- 299 (480)
|+++ .+++.+++.++++.+.||+.|-++= |-- +...+++.++ ++.+++... ..+++|++ ||+--
T Consensus 144 d~~~-~~~~~~~~~~~~~~~~G~~~i~l~D--T~G----~~~P~~v~~l---v~~l~~~~~~~~~~~i~~H~Hnd~GlA~ 213 (325)
T 3eeg_A 144 DAGR-ADQAFLARMVEAVIEAGADVVNIPD--TTG----YMLPWQYGER---IKYLMDNVSNIDKAILSAHCHNDLGLAT 213 (325)
T ss_dssp TGGG-SCHHHHHHHHHHHHHHTCSEEECCB--SSS----CCCHHHHHHH---HHHHHHHCSCGGGSEEEECBCCTTSCHH
T ss_pred cccc-chHHHHHHHHHHHHhcCCCEEEecC--ccC----CcCHHHHHHH---HHHHHHhCCCCCceEEEEEeCCCCCHHH
Confidence 3454 5899999999999999999998862 211 1122555554 455554421 01288999 45443
Q ss_pred HHHHHHHHcCCCEEecC
Q 038230 300 KVASEAVGKGAHIVNDV 316 (480)
Q Consensus 300 ~v~~aaL~~G~~iINdV 316 (480)
....+|+++|++.|..-
T Consensus 214 AN~laA~~aGa~~vd~t 230 (325)
T 3eeg_A 214 ANSLAALQNGARQVECT 230 (325)
T ss_dssp HHHHHHHHHTCCEEEEB
T ss_pred HHHHHHHHhCCCEEEEe
Confidence 34567888999998643
No 441
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=53.44 E-value=87 Score=31.13 Aligned_cols=96 Identities=13% Similarity=0.157 Sum_probs=61.6
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISE-GADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAV 306 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~-GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL 306 (480)
.++++.+++|++++++ |-..+-+-... .| .+++++++..+-+.+- .+++|.+|.. +++.+.+.+
T Consensus 138 ~~~~~~~~~a~~~~~~~G~~~~K~K~g~-~~------~~~d~~~v~avR~a~g-----~~~~l~vDan~~~~~~~a~~~~ 205 (367)
T 3dg3_A 138 DDPVKMVAEAERIRETYGINTFKVKVGR-RP------VQLDTAVVRALRERFG-----DAIELYVDGNRGWSAAESLRAM 205 (367)
T ss_dssp SCHHHHHHHHHHHHHHHCCCEEEEECCC-SS------THHHHHHHHHHHHHHG-----GGSEEEEECTTCSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCccEEEEeeCC-Ch------hhhHHHHHHHHHHHhC-----CCCEEEEECCCCCCHHHHHHHH
Confidence 4689999999999999 99998775321 11 1256666544333332 2689999954 455444333
Q ss_pred H----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 307 G----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 307 ~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+ .|..+|-+-......+.+..+.+..++|+++
T Consensus 206 ~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~ 241 (367)
T 3dg3_A 206 REMADLDLLFAEELCPADDVLSRRRLVGQLDMPFIA 241 (367)
T ss_dssp HHTTTSCCSCEESCSCTTSHHHHHHHHHHCSSCEEE
T ss_pred HHHHHhCCCEEECCCCcccHHHHHHHHHhCCCCEEe
Confidence 3 3888887543322125677777788999886
No 442
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=53.40 E-value=16 Score=36.39 Aligned_cols=93 Identities=17% Similarity=0.209 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.++ ++.++++.+.|.++|+= | +++ +.++- .+.|++. .++||+.|= ++++.++.+++.
T Consensus 194 ~~~~~-~~~~~~l~~~~i~~iE~------P----~~~-~~~~~----~~~l~~~---~~ipIa~dE~~~~~~~~~~~i~~ 254 (368)
T 1sjd_A 194 YTLGD-APQLARLDPFGLLLIEQ------P----LEE-EDVLG----HAELARR---IQTPICLDESIVSARAAADAIKL 254 (368)
T ss_dssp CCGGG-HHHHHTTGGGCCSEEEC------C----SCT-TCHHH----HHHHHTT---CSSCEEESTTCCSHHHHHHHHHT
T ss_pred CCHHH-HHHHHHHHhcCCCeEeC------C----CCh-hhHHH----HHHHHHh---CCCCEEECCCcCCHHHHHHHHHc
Confidence 46677 88888888889999872 2 211 11222 2344555 479999985 478999999988
Q ss_pred C-CCEEe-cCC--CC-CCCchHHHHHHhcCCCEEEEcCC
Q 038230 309 G-AHIVN-DVS--AG-QLDPDMYKVVAGLKVPYVAMHMR 342 (480)
Q Consensus 309 G-~~iIN-dVs--g~-~~d~~m~~l~~~~~~~vVlmh~~ 342 (480)
| +++|| +++ |+ +.--+++.+|+.+|.++++.|+-
T Consensus 255 ~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 293 (368)
T 1sjd_A 255 GAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGMI 293 (368)
T ss_dssp TCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred CCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEeCCcc
Confidence 5 78887 232 11 11147899999999999888874
No 443
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=53.30 E-value=23 Score=35.78 Aligned_cols=92 Identities=15% Similarity=0.119 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHc-CCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLT-MPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~-~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
+.+++++.++.+.+.|.++|+=.. ++ +.++- .+.|++ . .++||+.|= +.++.++.+++.
T Consensus 207 ~~~~a~~~~~~l~~~~i~~iEqP~----------~~-~d~~~----~~~l~~~~---~~iPI~~dE~~~~~~~~~~~i~~ 268 (401)
T 2hzg_A 207 DVEAAAARLPTLDAAGVLWLEEPF----------DA-GALAA----HAALAGRG---ARVRIAGGEAAHNFHMAQHLMDY 268 (401)
T ss_dssp CHHHHHTTHHHHHHTTCSEEECCS----------CT-TCHHH----HHHHHTTC---CSSEEEECTTCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEECCC----------Cc-cCHHH----HHHHHhhC---CCCCEEecCCcCCHHHHHHHHHC
Confidence 789999999999999999997321 11 12322 234455 4 479999974 368999999987
Q ss_pred C-CCEEec-CC--CC-CCCchHHHHHHhcCCCEEEEcCC
Q 038230 309 G-AHIVND-VS--AG-QLDPDMYKVVAGLKVPYVAMHMR 342 (480)
Q Consensus 309 G-~~iINd-Vs--g~-~~d~~m~~l~~~~~~~vVlmh~~ 342 (480)
| +++||= ++ |+ +.--+++.+|+.+|.+++ .|+.
T Consensus 269 ~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~-~h~~ 306 (401)
T 2hzg_A 269 GRIGFIQIDCGRIGGLGPAKRVADAAQARGITYV-NHTF 306 (401)
T ss_dssp SCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEE-ECCC
T ss_pred CCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEe-cCCC
Confidence 5 888872 11 21 111468899999999977 5653
No 444
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=53.04 E-value=15 Score=36.85 Aligned_cols=94 Identities=11% Similarity=-0.031 Sum_probs=63.9
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVG 307 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~ 307 (480)
..+.++|++.++++.+.|.++|+ +...|. .-+.+ ..|++. .++||+.|= +++..++.+++
T Consensus 195 ~~~~~~a~~~~~~l~~~~i~~iE---qP~~~~-----d~~~~-------~~l~~~---~~iPIa~dE~~~~~~~~~~~i~ 256 (367)
T 3dg3_A 195 GWSAAESLRAMREMADLDLLFAE---ELCPAD-----DVLSR-------RRLVGQ---LDMPFIADESVPTPADVTREVL 256 (367)
T ss_dssp CSCHHHHHHHHHHTTTSCCSCEE---SCSCTT-----SHHHH-------HHHHHH---CSSCEEECTTCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCEEE---CCCCcc-----cHHHH-------HHHHHh---CCCCEEecCCcCCHHHHHHHHH
Confidence 35789999999999889999998 322221 11223 334443 479999984 46888889888
Q ss_pred cC-CCEEec-CC--CCCCCchHHHHHHhcCCCEEEEcC
Q 038230 308 KG-AHIVND-VS--AGQLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 308 ~G-~~iINd-Vs--g~~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
.| +++||= ++ |.+.--+++.+|..+|.++++-++
T Consensus 257 ~~~~d~v~~k~~~~Git~~~~ia~~A~~~gi~~~~~~~ 294 (367)
T 3dg3_A 257 GGSATAISIKTARTGFTGSTRVHHLAEGLGLDMVMGNQ 294 (367)
T ss_dssp HTSCSEEEECHHHHTTHHHHHHHHHHHHHTCEEEECCS
T ss_pred cCCCCEEEeehhhhhHHHHHHHHHHHHHcCCeEEECCc
Confidence 75 788872 11 332224688999999999887443
No 445
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=52.87 E-value=39 Score=32.20 Aligned_cols=99 Identities=17% Similarity=-0.033 Sum_probs=0.0
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHH
Q 038230 223 SFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSK 300 (480)
Q Consensus 223 SFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~ 300 (480)
|-|.|-... .+..+.|+.+.+.||+.|-+ -|.+++-.-+.+ -++.+++. +++||-.-- .++.
T Consensus 56 SPskg~i~~--~~p~~~A~~~~~~GA~~isv---lt~~~~f~G~~~--------~l~~i~~~---v~lPvl~kdfI~d~~ 119 (254)
T 1vc4_A 56 SPSEGLIRE--VDPVEAALAYARGGARAVSV---LTEPHRFGGSLL--------DLKRVREA---VDLPLLRKDFVVDPF 119 (254)
T ss_dssp CTTTCCCCS--CCHHHHHHHHHHTTCSEEEE---ECCCSSSCCCHH--------HHHHHHHH---CCSCEEEESCCCSHH
T ss_pred CcCCCcCCC--CCHHHHHHHHHHcCCCEEEE---ecchhhhccCHH--------HHHHHHHh---cCCCEEECCcCCCHH
Q ss_pred HHHHHHHcCCCEEecCCCCCCCchHHHHHH---hcCCCEEE
Q 038230 301 VASEAVGKGAHIVNDVSAGQLDPDMYKVVA---GLKVPYVA 338 (480)
Q Consensus 301 v~~aaL~~G~~iINdVsg~~~d~~m~~l~~---~~~~~vVl 338 (480)
.+.+|+++|||.|--+..... +.+-+++. ++|..+.+
T Consensus 120 qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lGl~~lv 159 (254)
T 1vc4_A 120 MLEEARAFGASAALLIVALLG-ELTGAYLEEARRLGLEALV 159 (254)
T ss_dssp HHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCCCeEEE
No 446
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=52.85 E-value=20 Score=37.45 Aligned_cols=105 Identities=10% Similarity=0.024 Sum_probs=67.8
Q ss_pred CCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHH
Q 038230 226 DGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVA 302 (480)
Q Consensus 226 dgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~ 302 (480)
|++++.+.+++++..+++++.= .|+=|= +|++ +++|+-...+-+.+. ..+||.-|- ++++-+
T Consensus 276 ~~~~~~t~~Elid~y~~lle~y-pIv~IE--------DPl~-~dD~eg~a~Lt~~lg-----~~iqIvGDDl~vTn~~~i 340 (452)
T 3otr_A 276 NASKHLTGEKLKEVYEGWLKKY-PIISVE--------DPFD-QDDFASFSAFTKDVG-----EKTQVIGDDILVTNILRI 340 (452)
T ss_dssp CGGGEECHHHHHHHHHHHHHHS-CEEEEE--------CCSC-TTCHHHHHHHHHHHT-----TTSEEEESTTTTTCHHHH
T ss_pred cccccccHHHHHHHHHHHHhhh-CceEEe--------cCCC-hhhHHHHHHHHHhhC-----CCeEEEeCccccCCHHHH
Confidence 4556788999999999987752 244331 1222 234554443333332 148999984 389999
Q ss_pred HHHHHcC-CCEEe-cC---CCCCCCchHHHHHHhcCCCEEEEcCCCCC
Q 038230 303 SEAVGKG-AHIVN-DV---SAGQLDPDMYKVVAGLKVPYVAMHMRGDP 345 (480)
Q Consensus 303 ~aaL~~G-~~iIN-dV---sg~~~d~~m~~l~~~~~~~vVlmh~~g~p 345 (480)
+.+++.+ ++.|| .+ .+.+.--++..+|+.+|.++++-|..|..
T Consensus 341 ~~~Ie~~a~n~IlIKvnQIGgITEalka~~lA~~~G~~vmvshrSGET 388 (452)
T 3otr_A 341 EKALKDKACNCLLLKVNQIGSVTEAIEACLLAQKSGWGVQVSHRSGET 388 (452)
T ss_dssp HHHHHHTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSSCC
T ss_pred HHHHhcCCCCEEEeeccccccHHHHHHHHHHHHHcCCeEEEeCCCCCC
Confidence 9999975 55665 11 11111146889999999999999977654
No 447
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=52.78 E-value=24 Score=35.41 Aligned_cols=91 Identities=15% Similarity=0.050 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC--CHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF--YSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~--~~~v~~aaL~~ 308 (480)
.+.+++++.++.+.+.|.++|+=. ..| +.++- .+.|++. .++||..|=. +++.++.+++.
T Consensus 201 ~~~~~a~~~~~~l~~~~i~~iEqP---~~~--------~~~~~----~~~l~~~---~~iPI~~de~i~~~~~~~~~i~~ 262 (384)
T 2pgw_A 201 WSVHDAINMCRKLEKYDIEFIEQP---TVS--------WSIPA----MAHVREK---VGIPIVADQAAFTLYDVYEICRQ 262 (384)
T ss_dssp CCHHHHHHHHHHHGGGCCSEEECC---SCT--------TCHHH----HHHHHHH---CSSCEEESTTCCSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCCCEEeCC---CCh--------hhHHH----HHHHHhh---CCCCEEEeCCcCCHHHHHHHHHc
Confidence 478999999999999999999822 111 11222 2333443 3789999754 79999999998
Q ss_pred C-CCEEec-CC--CC-CCCchHHHHHHhcCCCEEEE
Q 038230 309 G-AHIVND-VS--AG-QLDPDMYKVVAGLKVPYVAM 339 (480)
Q Consensus 309 G-~~iINd-Vs--g~-~~d~~m~~l~~~~~~~vVlm 339 (480)
| +|+|+= ++ |+ ..--+++.+|+++|.++++-
T Consensus 263 ~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 298 (384)
T 2pgw_A 263 RAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIH 298 (384)
T ss_dssp TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeec
Confidence 5 888872 21 11 11146889999999998763
No 448
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=52.75 E-value=30 Score=35.01 Aligned_cols=90 Identities=7% Similarity=0.110 Sum_probs=62.9
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-cCCcCCCCeEEEeC--CCHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVL-TMPEMEGKLVSVDT--FYSKVASEAV 306 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~-~~~~~~~~pISIDT--~~~~v~~aaL 306 (480)
-.+.++|++.++.+.+.|.++|+ |...| +.++. ...|+ +. .++||+.|= ++++.++.++
T Consensus 205 ~~~~~~A~~~~~~l~~~~i~~iE---qP~~~--------~d~~~----~~~l~~~~---~~iPIa~dE~i~~~~~~~~~i 266 (389)
T 3ozy_A 205 SLGRHDALAMLRILDEAGCYWFE---EPLSI--------DDIEG----HRILRAQG---TPVRIATGENLYTRNAFNDYI 266 (389)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEE---SCSCT--------TCHHH----HHHHHTTC---CSSEEEECTTCCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhcCCCEEE---CCCCc--------ccHHH----HHHHHhcC---CCCCEEeCCCCCCHHHHHHHH
Confidence 35789999999999999999997 22221 11222 34456 55 589999984 4677888899
Q ss_pred HcC-CCEEecCCCCC-----CCchHHHHHHhcCCCEEE
Q 038230 307 GKG-AHIVNDVSAGQ-----LDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 307 ~~G-~~iINdVsg~~-----~d~~m~~l~~~~~~~vVl 338 (480)
+.| +|+|| +.-.. .--+++.+|..+|.+++.
T Consensus 267 ~~~~~d~v~-ik~~~~GGit~~~~ia~~A~~~gi~~~~ 303 (389)
T 3ozy_A 267 RNDAIDVLQ-ADASRAGGITEALAISASAASAHLAWNP 303 (389)
T ss_dssp HTTCCSEEC-CCTTTSSCHHHHHHHHHHHHHTTCEECC
T ss_pred HcCCCCEEE-eCccccCCHHHHHHHHHHHHHcCCEEEe
Confidence 874 88888 32211 014688899999999874
No 449
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=52.71 E-value=51 Score=34.60 Aligned_cols=145 Identities=16% Similarity=0.176 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--------------
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT-------------- 296 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT-------------- 296 (480)
.+.+++++.+++..+.|||+|.+=...-. ..++.+++.++ .+. .++||-+--
T Consensus 14 ~~~~~~~~~~~~~~~~g~D~vElRvD~l~----~~~~~~~l~~l-------~~~---~~~PiI~T~R~~~eGG~~~~~~~ 79 (523)
T 2o7s_A 14 DSIDKMVIETSKAHELGADLVEIRLDWLK----DFNPLEDLKTI-------IKK---SPLPTLFTYRPKWEGGQYEGDEN 79 (523)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEEGGGCS----SCCHHHHHHHH-------HHH---CSSCEEEECCBGGGTSSBCSCHH
T ss_pred CCHHHHHHHHHHhhhcCCCEEEEEEeccc----ccChHHHHHHH-------Hhc---CCCcEEEEecccccCCCCCCCHH
Confidence 47899999999989999999998764221 12222333332 222 255653311
Q ss_pred CCHHHHHHHHHcCCCEEecCCCCCCCchHHHHH---HhcCCCEEEE-cC-CCCCCccccccccchhhHHHHHHHHHHHHH
Q 038230 297 FYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVV---AGLKVPYVAM-HM-RGDPSTMQNEENLQYDDVCKQVASELYSKV 371 (480)
Q Consensus 297 ~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~---~~~~~~vVlm-h~-~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i 371 (480)
.+-+.++.|++.|+++| ||.... .++...-+ +..++.+|+. |+ .++|.. +.+.+++
T Consensus 80 ~~~~ll~~~~~~~~~yi-DvEl~~-~~~~~~~~~~~~~~~~kiI~S~H~f~~tp~~-----------------~~~~~~~ 140 (523)
T 2o7s_A 80 ERRDVLRLAMELGADYI-DVELQV-ASEFIKSIDGKKPGKFKVIVSSHNYQNTPSV-----------------EDLDGLV 140 (523)
T ss_dssp HHHHHHHHHHHHTCSEE-EEEHHH-HHHHHHHTTTCCCTTCEEEEEEECSSCCCCH-----------------HHHHHHH
T ss_pred HHHHHHHHHHHhCCCEE-EEECCC-chHHHHHHHHhccCCCEEEEEcccCCCCcCH-----------------HHHHHHH
Confidence 12456788888899987 453211 23333322 1236788876 43 345521 3456778
Q ss_pred HHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhcccCCCcE
Q 038230 372 RDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGLAASHAPI 413 (480)
Q Consensus 372 ~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l~~~g~Pi 413 (480)
+++.+.|-+-=+|.. .+++.++++.+++-......|+
T Consensus 141 ~~~~~~gaDivKia~-----~a~~~~D~~~l~~~~~~~~~p~ 177 (523)
T 2o7s_A 141 ARIQQTGADIVKIAT-----TAVDIADVARMFHITSKAQVPT 177 (523)
T ss_dssp HHHHTTTCSEEEEEE-----ECSSGGGHHHHHHHHHHCSSCE
T ss_pred HHHHHhCCCEEEEEe-----cCCCHHHHHHHHHHHhhcCCCE
Confidence 888888864224443 4577788888776433335664
No 450
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=52.54 E-value=29 Score=32.22 Aligned_cols=88 Identities=16% Similarity=0.265 Sum_probs=50.6
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC--------------------
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF-------------------- 297 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~-------------------- 297 (480)
+.++++.+.|||.+-+|.+.. ++...+..+++.+-.. .+.+++|..
T Consensus 87 ~~~~~~~~~Gad~V~lg~~~l----------~~p~~~~~~~~~~g~~----~i~~~~~~~~~~g~~~v~~~g~~~~~~~~ 152 (253)
T 1thf_D 87 ETASELILRGADKVSINTAAV----------ENPSLITQIAQTFGSQ----AVVVAIDAKRVDGEFMVFTYSGKKNTGIL 152 (253)
T ss_dssp HHHHHHHHTTCSEEEESHHHH----------HCTHHHHHHHHHHCGG----GEEEEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred HHHHHHHHcCCCEEEEChHHH----------hChHHHHHHHHHcCCC----cEEEEEEEEccCCcEEEEECCCccccCCC
Confidence 347777789999999995321 1122333334333211 245788774
Q ss_pred CHHHHHHHHHcCCC--EEecCCCCC----CCchHHHH-HHhcCCCEEEE
Q 038230 298 YSKVASEAVGKGAH--IVNDVSAGQ----LDPDMYKV-VAGLKVPYVAM 339 (480)
Q Consensus 298 ~~~v~~aaL~~G~~--iINdVsg~~----~d~~m~~l-~~~~~~~vVlm 339 (480)
..+.++++.+.|++ ++++++... .+.+++.- .+..+.|+|..
T Consensus 153 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~ipvia~ 201 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIAS 201 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcCCCEEEE
Confidence 24668888899987 446665211 13344444 44457888764
No 451
>3epo_A Thiamine biosynthesis protein THIC; alpha-beta barrel, SAM superfamily, biosynthetic protein; HET: MP5; 2.10A {Caulobacter crescentus} PDB: 3epm_A* 3epn_A*
Probab=52.31 E-value=1.1e+02 Score=32.72 Aligned_cols=194 Identities=16% Similarity=0.236 Sum_probs=107.5
Q ss_pred cCCHHHHHHHHHHHHHcCCCEE-EeCCCCCCCCCCCCCHHHHHHH-HH----------HHHHHHHcCCcCCCCeEEEeCC
Q 038230 230 FQSVEAAVSQVRLMISEGADMI-DIGAQSTRPMATKISAEKELER-LI----------PVLEAVLTMPEMEGKLVSVDTF 297 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiI-DIG~eStrP~a~~v~~~eE~~r-l~----------~vi~~l~~~~~~~~~pISIDT~ 297 (480)
..+.++=+++++--++.|||-| |+ ||..+ . .|+++ ++ |+-+++.+.. + .+--.
T Consensus 226 ~~~ie~EveK~~~A~~~GADtvMDL---STGgd-----i-~~~R~~Il~~spvPiGTVPIYqA~~k~~---g---~~~~l 290 (612)
T 3epo_A 226 LSTVADEVDKLVWATRWGADTVMDL---STGRN-----I-HNIRDWIIRNSSVPIGTVPIYQALEKVN---G---VAEDL 290 (612)
T ss_dssp --CHHHHHHHHHHHHHTTCSEEEEC---CCSTT-----H-HHHHHHHHTTCSSCEEECHHHHHHHHTT---T---CGGGC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEec---cCCCC-----H-HHHHHHHHHcCCCCccCcchHHHHHHhC---C---ChhhC
Confidence 4578888999999999999854 77 34322 1 22222 21 2333332210 1 13334
Q ss_pred CHHHHHHHHH----cCCCEEecCCCCCC-------------------------------------CchHHHHHHhcCCCE
Q 038230 298 YSKVASEAVG----KGAHIVNDVSAGQL-------------------------------------DPDMYKVVAGLKVPY 336 (480)
Q Consensus 298 ~~~v~~aaL~----~G~~iINdVsg~~~-------------------------------------d~~m~~l~~~~~~~v 336 (480)
..+.+...++ .|+|++-==.|-+. -+++++++++|++.+
T Consensus 291 t~e~~~d~ie~QAeqGVDfmTIHaGv~~~~v~~~~~R~tgIVSRGGSima~Wml~~~kENplYe~FD~ileI~k~YDVtl 370 (612)
T 3epo_A 291 NWEVFRDTLIEQCEQGVDYFTIHAGVRLPFIPMTAKRVTGIVSRGGSIMAKWCLAHHKENFLYERFDEICEIMRAYDVSF 370 (612)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECTTCCGGGGGGGTTSSSCCCCHHHHHHHHHHHHHTCCCHHHHTHHHHHHHHTTTTCEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcccccHHHHHHhcCCcCCeecCcHHHHHHHHHHcCCcChHHHHHHHHHHHHHHhCeEE
Confidence 5555555554 38887541111110 036899999999988
Q ss_pred EEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEe-cCCCCccChhHHHHHHHhcccCCCcEEE
Q 038230 337 VAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIID-PGLGFSKKAEHNLDILLGLAASHAPILI 415 (480)
Q Consensus 337 Vlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilD-PgiGf~k~~~~~~~~lr~l~~~g~Pil~ 415 (480)
=|=.-. .|....+-.+ ..=+.|+ ..|-++.++|.++|+ ++++. ||.-.-...+.|+++.+++ ..+.|..+
T Consensus 371 SLGDgl-RPG~iaDA~D---~AQ~~EL-~~LGELtkrAwe~gV---QVMIEGPGHVPl~~I~~Nv~lqk~l-C~~APfYv 441 (612)
T 3epo_A 371 SLGDGL-RPGSTADAND---EAQFSEL-RTLGELTKVAWKHGV---QVMIEGPGHVAMHKIKANMDEQLKH-CHEAPFYT 441 (612)
T ss_dssp EECCTT-CCSSGGGTTC---HHHHHHH-HHHHHHHHHHHHTTC---CEEEECCCBCCHHHHHHHHHHHHHH-TTTCCEEE
T ss_pred eccccc-CCCccccCCc---HHHHHHH-HHHHHHHHHHHHcCC---cEEEECCCCCCHHHHHHHHHHHHHh-cCCCCccc
Confidence 773321 2443322111 1123333 467789999999999 46665 5544445567788888775 34778743
Q ss_pred -eeccccccccccCCCCcCcccHHHHHHHHHHHHcCCcEEE
Q 038230 416 -GPSRKRFLGEICNRPSADERDPATIASITAGVLGGANIVR 455 (480)
Q Consensus 416 -G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a~~~Ga~IlR 455 (480)
|. -+|.-. |.=-+..++.-.+++...|+++|=
T Consensus 442 LGP-------LvTDIA-PGYDHItsAIGaA~aa~~GadfLC 474 (612)
T 3epo_A 442 LGP-------LTTDIA-PGYDHITSAIGAAMIGWFGTAMLC 474 (612)
T ss_dssp ECC-------BSCSSC-TTCHHHHHHHHHHHHHHHTCCEEE
T ss_pred cCc-------cccccC-CCchHHHHHHHHHHHHHhchhhee
Confidence 42 123322 221222334457888999999874
No 452
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=52.22 E-value=23 Score=35.85 Aligned_cols=90 Identities=10% Similarity=0.036 Sum_probs=62.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.+++++.++.+.+.|.++|+=- ..| +.++- .+.|++. .++||+.|= ++++.++.+++.
T Consensus 200 ~~~~~a~~~~~~l~~~~i~~iEqP---~~~--------~~~~~----~~~l~~~---~~iPIa~dE~~~~~~~~~~~i~~ 261 (397)
T 2qde_A 200 WTYDQALTTIRALEKYNLSKIEQP---LPA--------WDLDG----MARLRGK---VATPIYADESAQELHDLLAIINK 261 (397)
T ss_dssp CCHHHHHHHHHHHGGGCCSCEECC---SCT--------TCHHH----HHHHHTT---CSSCEEESTTCCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCEEECC---CCh--------hhHHH----HHHHHhh---CCCCEEEeCCcCCHHHHHHHHHc
Confidence 478999999999988999998722 111 11222 2444555 489999984 468899999987
Q ss_pred C-CCEEec-CC---CCCCCchHHHHHHhcCCCEEE
Q 038230 309 G-AHIVND-VS---AGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 309 G-~~iINd-Vs---g~~~d~~m~~l~~~~~~~vVl 338 (480)
| +++||= ++ |.+.--+++.+|+.+|.++++
T Consensus 262 ~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 296 (397)
T 2qde_A 262 GAADGLMIKTQKAGGLLKAQRWLTLARLANLPVIC 296 (397)
T ss_dssp TCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 5 888872 21 211114688999999999776
No 453
>3tqk_A Phospho-2-dehydro-3-deoxyheptonate aldolase; transferase; 2.30A {Francisella tularensis}
Probab=52.21 E-value=1.5e+02 Score=29.81 Aligned_cols=177 Identities=11% Similarity=0.081 Sum_probs=99.7
Q ss_pred CCHHHHHHHHHHHHHcC-------CCEEEeCCCCCCC--CCCCC----------CHHHHHHHHHHHHHHHHcCCcCCCCe
Q 038230 231 QSVEAAVSQVRLMISEG-------ADMIDIGAQSTRP--MATKI----------SAEKELERLIPVLEAVLTMPEMEGKL 291 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~G-------AdiIDIG~eStrP--~a~~v----------~~~eE~~rl~~vi~~l~~~~~~~~~p 291 (480)
-+.+.+++.|+++.+.| +.++-+|++-.|. +.... +.++-++.+..++..+.+. ++|
T Consensus 61 ed~eq~leyA~~Lk~~~~~~~d~l~~vmR~y~~KPRTs~g~kGL~nDP~ld~s~~i~~GL~~~R~ll~~~~e~----GLp 136 (346)
T 3tqk_A 61 HDPAAAIEYATKLKEQVKKFHKDILIIMRVYFEKPRTTIGWKGFINDPDLDNSYNINKGLRLARNLLSDLTNM----GLP 136 (346)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCCSSCSCCCTTTCTTSSSCCCHHHHHHHHHHHHHHHHHT----TCC
T ss_pred CCHHHHHHHHHHHHHHHhhhcccceEEeeecccCCCCCcCccccccCCCCCCCccHHHHHHHHHHHHHHHHhc----CCC
Confidence 47889999999888776 6799999876552 32211 1245566666666666654 888
Q ss_pred EEEeCCCHHHHHHHHH-----------------------c--CCCEEecCCCCCCCchHHHHHHh------------cCC
Q 038230 292 VSVDTFYSKVASEAVG-----------------------K--GAHIVNDVSAGQLDPDMYKVVAG------------LKV 334 (480)
Q Consensus 292 ISIDT~~~~v~~aaL~-----------------------~--G~~iINdVsg~~~d~~m~~l~~~------------~~~ 334 (480)
+.-.-.+|...+...+ . -+-+-|..+|. -..++..+.. .|.
T Consensus 137 iatE~ld~~~~qyv~dlvs~~aIGARt~enq~hre~asg~s~PVg~Kngt~gt--i~~ai~Ai~aa~~pH~Fl~~~~~G~ 214 (346)
T 3tqk_A 137 CATEFLDVITPQYFAELITWGAIGARTVESQVHRELASGLSASIGFKNATNGD--VQVAVDAVKSATYPHHFLSTTKSGS 214 (346)
T ss_dssp EEEECCSSSGGGGTGGGCSEEEECGGGTTCHHHHHHHTTCSSEEEEECCTTCC--SHHHHHHHHHHTSCCEEEEECTTSC
T ss_pred EEEEecCcCCHHHHHHHhheeeeCcccccCHHHHHHhcCCCCceEEeCCCCCc--hHHHhhHHHHHhCCceEEeeCCCCc
Confidence 8765544422221111 1 12244555442 1333333221 122
Q ss_pred CEEEEcCCCCCCcc------ccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCC-ccChhHHHHHHHhc-
Q 038230 335 PYVAMHMRGDPSTM------QNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGF-SKKAEHNLDILLGL- 406 (480)
Q Consensus 335 ~vVlmh~~g~p~~~------~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf-~k~~~~~~~~lr~l- 406 (480)
.. +.++.|.|..- ...+||++++ +.+..+.+.++|++ .+|++|...|- .|+..+-..+.+.+
T Consensus 215 ~a-iv~T~GN~~~HvILRGg~~gpNY~~~~--------v~~a~~~l~k~~l~-~~imVDcSH~NS~K~~~~Q~~V~~~v~ 284 (346)
T 3tqk_A 215 TA-IFATKGNQNGHVILRGGASGPNFSKEH--------VDDCIAKLKKADIN-TKVMIDCSHGNSQKDHSKQISVLADIC 284 (346)
T ss_dssp EE-EEECCCCSCEEEEECCCTTCCCCSHHH--------HHHHHHHHHHTTCC-CCEEEESSHHHHTTCGGGHHHHHHHHH
T ss_pred EE-EEECCCCCCEEEEecCCCCCCCCCHHH--------HHHHHHHHHhCCCC-CeEEEecCcccccccHHHHHHHHHHHH
Confidence 22 23455666421 1225666544 34556677788985 58999998874 67766556666554
Q ss_pred ---ccCCCcEEEeecccccccc
Q 038230 407 ---AASHAPILIGPSRKRFLGE 425 (480)
Q Consensus 407 ---~~~g~Pil~G~SrKsfi~~ 425 (480)
.. -..++|+=-.|||..
T Consensus 285 ~q~~~--~~~I~GvMiES~l~~ 304 (346)
T 3tqk_A 285 EQIKH--SNDIFGVMIESNLVA 304 (346)
T ss_dssp HHHHH--CSSEEEEEEEBCSEE
T ss_pred HHHhc--CCceeeeeHHhhhhc
Confidence 23 344667766777654
No 454
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=52.19 E-value=52 Score=33.25 Aligned_cols=81 Identities=16% Similarity=0.125 Sum_probs=52.4
Q ss_pred CCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCc-CCCCeEEE---eCCCHH-
Q 038230 226 DGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPE-MEGKLVSV---DTFYSK- 300 (480)
Q Consensus 226 dgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~-~~~~pISI---DT~~~~- 300 (480)
|+++ .+++.+++.++.+.+.||+.|-++= |--. . ...++.++ ++.+++... ..+++|++ |++--.
T Consensus 150 d~~r-~~~~~~~~~~~~~~~~Ga~~i~l~D--T~G~---~-~P~~~~~l---v~~l~~~~~~~~~~~l~~H~Hnd~GlAv 219 (370)
T 3rmj_A 150 DALR-SEIDFLAEICGAVIEAGATTINIPD--TVGY---S-IPYKTEEF---FRELIAKTPNGGKVVWSAHCHNDLGLAV 219 (370)
T ss_dssp TGGG-SCHHHHHHHHHHHHHHTCCEEEEEC--SSSC---C-CHHHHHHH---HHHHHHHSTTGGGSEEEEECBCTTSCHH
T ss_pred CCCc-cCHHHHHHHHHHHHHcCCCEEEecC--ccCC---c-CHHHHHHH---HHHHHHhCCCcCceEEEEEeCCCCChHH
Confidence 4554 5889999999999999999998862 2211 1 22455554 444454321 01288999 454433
Q ss_pred -HHHHHHHcCCCEEecC
Q 038230 301 -VASEAVGKGAHIVNDV 316 (480)
Q Consensus 301 -v~~aaL~~G~~iINdV 316 (480)
-..+|+++|++.|..-
T Consensus 220 AN~laAv~aGa~~vd~t 236 (370)
T 3rmj_A 220 ANSLAALKGGARQVECT 236 (370)
T ss_dssp HHHHHHHHTTCCEEEEB
T ss_pred HHHHHHHHhCCCEEEEe
Confidence 4568888999998643
No 455
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=52.00 E-value=47 Score=33.82 Aligned_cols=91 Identities=8% Similarity=0.004 Sum_probs=62.9
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQS-TRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAV 306 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eS-trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL 306 (480)
-.+.++|++.++++.+.|.++|+- . ..|. .-+.+.+ |++. +++||+.| -+++..++.++
T Consensus 223 ~~~~~~A~~~~~~L~~~~i~~iEq---P~~~~~-----~~~~~~~-------l~~~---~~iPIa~dE~~~~~~~~~~~l 284 (410)
T 3dip_A 223 LWGTHAAARICNALADYGVLWVED---PIAKMD-----NIPAVAD-------LRRQ---TRAPICGGENLAGTRRFHEML 284 (410)
T ss_dssp CBCHHHHHHHHHHGGGGTCSEEEC---CBSCTT-----CHHHHHH-------HHHH---HCCCEEECTTCCSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEC---CCCCcc-----cHHHHHH-------HHhh---CCCCEEecCCcCCHHHHHHHH
Confidence 468999999999999999999982 2 2221 1233333 3433 37899998 46788999999
Q ss_pred HcC-CCEEec-CC--CC-CCCchHHHHHHhcCCCEEE
Q 038230 307 GKG-AHIVND-VS--AG-QLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 307 ~~G-~~iINd-Vs--g~-~~d~~m~~l~~~~~~~vVl 338 (480)
+.| +++||= ++ |+ +.--+++.+|..+|.+++.
T Consensus 285 ~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~ 321 (410)
T 3dip_A 285 CADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAP 321 (410)
T ss_dssp HTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEE
T ss_pred HcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEee
Confidence 985 788872 21 11 1114688999999999875
No 456
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=51.97 E-value=23 Score=32.01 Aligned_cols=58 Identities=21% Similarity=0.283 Sum_probs=34.0
Q ss_pred HHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC----HHHHHHHHHcCCCEE
Q 038230 240 VRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY----SKVASEAVGKGAHIV 313 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~----~~v~~aaL~~G~~iI 313 (480)
+++..+.|||.+=+..++ .++.++++ ++.+++. +.++.++... .+.++.+++.|+++|
T Consensus 70 ~~~~~~~Gad~v~v~~~~---------~~~~~~~~---~~~~~~~----g~~~~v~~~~~~t~~~~~~~~~~~g~d~i 131 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVT---------DVLTIQSC---IRAAKEA----GKQVVVDMICVDDLPARVRLLEEAGADML 131 (211)
T ss_dssp HHHHHHTTCSEEEEETTS---------CHHHHHHH---HHHHHHH----TCEEEEECTTCSSHHHHHHHHHHHTCCEE
T ss_pred HHHHHhcCCCEEEEeCCC---------ChhHHHHH---HHHHHHc----CCeEEEEecCCCCHHHHHHHHHHcCCCEE
Confidence 778889999999998653 12334444 4445543 5555555222 244555555666654
No 457
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=51.97 E-value=76 Score=31.72 Aligned_cols=93 Identities=14% Similarity=0.119 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHHH---
Q 038230 234 EAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAVG--- 307 (480)
Q Consensus 234 e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL~--- 307 (480)
++..+.|++++++|-+.+.+-... -+.+++.+++ +++++... .+++|.||.. +++.+.+.++
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~-------~~~~~d~e~v----~avR~a~G-~d~~l~vDan~~~~~~~a~~~~~~l~ 208 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGG-------TSFKEDVRHI----NALQHTAG-SSITMILDANQSYDAAAAFKWERYFS 208 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSS-------SCHHHHHHHH----HHHHHHHC-TTSEEEEECTTCCCHHHHHTTHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCC-------CCHHHHHHHH----HHHHHhhC-CCCEEEEECCCCCCHHHHHHHHHHHh
Confidence 888999999999999999985321 1244555554 44444311 2789999953 4444332222
Q ss_pred -c-CCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 308 -K-GAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 -~-G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
. |.++|-+--.....+.+..+.++.++|++.
T Consensus 209 ~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~ 241 (382)
T 2gdq_A 209 EWTNIGWLEEPLPFDQPQDYAMLRSRLSVPVAG 241 (382)
T ss_dssp TCSCEEEEECCSCSSCHHHHHHHHTTCSSCEEE
T ss_pred hccCCeEEECCCCcccHHHHHHHHhhCCCCEEe
Confidence 4 677776543322125567777777888876
No 458
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=51.93 E-value=44 Score=34.98 Aligned_cols=72 Identities=22% Similarity=0.222 Sum_probs=42.7
Q ss_pred HHHHHHHcCCCEEEeCCCCC-----CCCCC-CCCHHHHHHHHHHHHHHHHcC---CcCCCCeEEEe--CCCHHHHHHHHH
Q 038230 239 QVRLMISEGADMIDIGAQST-----RPMAT-KISAEKELERLIPVLEAVLTM---PEMEGKLVSVD--TFYSKVASEAVG 307 (480)
Q Consensus 239 ~A~~~v~~GAdiIDIG~eSt-----rP~a~-~v~~~eE~~rl~~vi~~l~~~---~~~~~~pISID--T~~~~v~~aaL~ 307 (480)
.|+.+++.|||+|++|.+++ |-... .++. +.-+..+.+...+. .. .++||-.| -.++.-+.+||.
T Consensus 297 ~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~---~~~l~~v~~~~~~~~~~~~-~~ipvia~GGi~~~~di~kAla 372 (503)
T 1me8_A 297 GFRYLADAGADFIKIGIGGGSICITREQKGIGRGQ---ATAVIDVVAERNKYFEETG-IYIPVCSDGGIVYDYHMTLALA 372 (503)
T ss_dssp HHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCH---HHHHHHHHHHHHHHHHHHS-EECCEEEESCCCSHHHHHHHHH
T ss_pred HHHHHHHhCCCeEEecccCCcCcccccccCCCCch---HHHHHHHHHHHHHHhhhcC-CCceEEEeCCCCCHHHHHHHHH
Confidence 56778899999999986542 21110 1232 22233333332210 00 14677664 578899999999
Q ss_pred cCCCEEe
Q 038230 308 KGAHIVN 314 (480)
Q Consensus 308 ~G~~iIN 314 (480)
.||+.+-
T Consensus 373 lGA~~V~ 379 (503)
T 1me8_A 373 MGADFIM 379 (503)
T ss_dssp TTCSEEE
T ss_pred cCCCEEE
Confidence 9999875
No 459
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=51.63 E-value=44 Score=34.81 Aligned_cols=60 Identities=15% Similarity=0.142 Sum_probs=45.2
Q ss_pred HHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEe
Q 038230 240 VRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 240 A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iIN 314 (480)
..+..+.|||.|=+-+. . .+ .++++.+ ++..++. ++-+-+|..+.+.++.|++.|+++|-
T Consensus 123 i~ea~~~GAD~ILLi~a-~------l~-~~~l~~l---~~~a~~l----gm~~LvEvh~~eE~~~A~~lga~iIG 182 (452)
T 1pii_A 123 IYLARYYQADACLLMLS-V------LD-DDQYRQL---AAVAHSL----EMGVLTEVSNEEEQERAIALGAKVVG 182 (452)
T ss_dssp HHHHHHTTCSEEEEETT-T------CC-HHHHHHH---HHHHHHT----TCEEEEEECSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHcCCCEEEEEcc-c------CC-HHHHHHH---HHHHHHc----CCeEEEEeCCHHHHHHHHHCCCCEEE
Confidence 44467899999999863 2 22 2445544 5555664 88999999999999999999999874
No 460
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=51.53 E-value=22 Score=34.05 Aligned_cols=42 Identities=17% Similarity=0.197 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHcCCcCCCCeEEE--eCCCHHHHHHHHHcCCCEEe
Q 038230 268 EKELERLIPVLEAVLTMPEMEGKLVSV--DTFYSKVASEAVGKGAHIVN 314 (480)
Q Consensus 268 ~eE~~rl~~vi~~l~~~~~~~~~pISI--DT~~~~v~~aaL~~G~~iIN 314 (480)
....+++.++++.+++. ++.+|+ | .+++-+++|.+.|++.|-
T Consensus 110 ~~~~~~l~~~i~~L~~~----GIrVSLFID-pd~~qi~aA~~~GA~~IE 153 (243)
T 1m5w_A 110 AGQRDKMRDACKRLADA----GIQVSLFID-ADEEQIKAAAEVGAPFIE 153 (243)
T ss_dssp GGGHHHHHHHHHHHHHT----TCEEEEEEC-SCHHHHHHHHHTTCSEEE
T ss_pred HhhHHHHHHHHHHHHHC----CCEEEEEeC-CCHHHHHHHHHhCcCEEE
Confidence 34578899999999986 777664 5 556666666666666664
No 461
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=51.52 E-value=30 Score=35.05 Aligned_cols=90 Identities=9% Similarity=0.013 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHcC
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGKG 309 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~G 309 (480)
+.++|++.++++.+.|.++|+= ...|. .++. ...|++. +++||+.|= +++..++.+++.|
T Consensus 218 ~~~~A~~~~~~L~~~~i~~iEe---P~~~~--------d~~~----~~~l~~~---~~iPIa~dE~~~~~~~~~~~l~~~ 279 (394)
T 3mkc_A 218 DWYEVARLLNSIEDLELYFAEA---TLQHD--------DLSG----HAKLVEN---TRSRICGAEMSTTRFEAEEWITKG 279 (394)
T ss_dssp CHHHHHHHHHHTGGGCCSEEES---CSCTT--------CHHH----HHHHHHH---CSSCBEECTTCCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhhhcCCeEEEC---CCCch--------hHHH----HHHHHhh---CCCCEEeCCCCCCHHHHHHHHHcC
Confidence 8899999999999999999972 22221 1222 2344544 479999984 4678889999885
Q ss_pred -CCEEecCCCCC-----CCchHHHHHHhcCCCEEEEcC
Q 038230 310 -AHIVNDVSAGQ-----LDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 310 -~~iINdVsg~~-----~d~~m~~l~~~~~~~vVlmh~ 341 (480)
+|+|| +.-.. .--+++.+|..+|.+++ .|.
T Consensus 280 ~~d~v~-~k~~~~GGit~~~~ia~~A~~~gi~~~-~h~ 315 (394)
T 3mkc_A 280 KVHLLQ-SDYNRCGGLTELRRITEMATANNVQVM-PHN 315 (394)
T ss_dssp CCSEEC-CCTTTTTHHHHHHHHHHHHHHTTCEEC-CCC
T ss_pred CCCeEe-cCccccCCHHHHHHHHHHHHHcCCEEe-ecC
Confidence 88887 33211 01468899999999987 354
No 462
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=51.45 E-value=29 Score=35.23 Aligned_cols=92 Identities=9% Similarity=0.039 Sum_probs=62.9
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVG 307 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~ 307 (480)
-.+.++|++.++++.+.|.++|+ |...|. .-+.+. .|++. +++||+.|= +++..++.+++
T Consensus 220 ~~~~~~A~~~~~~L~~~~i~~iE---eP~~~~-----~~~~~~-------~l~~~---~~iPIa~dE~~~~~~~~~~~l~ 281 (400)
T 4dxk_A 220 MWQLLPAMQIAKALTPYQTFWHE---DPIKMD-----SLSSLT-------RYAAV---SPAPISASETLGSRWAFRDLLE 281 (400)
T ss_dssp CBCHHHHHHHHHHTGGGCCSEEE---CCBCTT-----SGGGHH-------HHHHH---CSSCEEECTTCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCCCEEE---cCCCcc-----cHHHHH-------HHHHh---CCCCEEecCCcCCHHHHHHHHH
Confidence 46899999999999999999999 222221 112233 33443 489999984 46778889998
Q ss_pred cC-CCEEecCCCCC-----CCchHHHHHHhcCCCEEEEcC
Q 038230 308 KG-AHIVNDVSAGQ-----LDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 308 ~G-~~iINdVsg~~-----~d~~m~~l~~~~~~~vVlmh~ 341 (480)
.| +++|| +.-.. .--+++.+|..+|.+++. |.
T Consensus 282 ~~a~d~v~-~d~~~~GGit~~~kia~~A~~~gi~~~~-h~ 319 (400)
T 4dxk_A 282 TGAAGVVM-LDISWCGGLSEARKIASMAEAWHLPVAP-HX 319 (400)
T ss_dssp TTCCCEEE-ECTTTTTHHHHHHHHHHHHHHTTCCEEE-C-
T ss_pred cCCCCEEE-eCccccCCHHHHHHHHHHHHHcCCEEEe-cC
Confidence 86 78887 32211 114688999999999875 54
No 463
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=51.38 E-value=19 Score=36.33 Aligned_cols=93 Identities=12% Similarity=0.036 Sum_probs=62.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.+++++.++++.+.|.++|+=- +++ +.++. .+.|++. .++||+.|= ++++.++.+++.
T Consensus 205 ~~~~~a~~~~~~l~~~~i~~iEqP----------~~~-~d~~~----~~~l~~~---~~iPIa~dE~~~~~~~~~~~i~~ 266 (391)
T 2qgy_A 205 EDLDQTKSFLKEVSSFNPYWIEEP----------VDG-ENISL----LTEIKNT---FNMKVVTGEKQSGLVHFRELISR 266 (391)
T ss_dssp SCHHHHHHHHHHHGGGCCSEEECS----------SCT-TCHHH----HHHHHHH---CSSCEEECTTCCSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCCCeEeCC----------CCh-hhHHH----HHHHHhh---CCCCEEEcCCcCCHHHHHHHHHc
Confidence 578999999999989999999732 111 11222 2333443 378999974 478999999988
Q ss_pred C-CCEEec-CC--CC-CCCchHHHHHHhcCCCEEEEcC
Q 038230 309 G-AHIVND-VS--AG-QLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 309 G-~~iINd-Vs--g~-~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
| +++||= ++ |+ +.--+++.+|+.+|.++++-.+
T Consensus 267 ~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 267 NAADIFNPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp TCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CCCCEEEECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 5 788872 22 11 1114688899999999876433
No 464
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=51.25 E-value=26 Score=34.93 Aligned_cols=93 Identities=12% Similarity=0.094 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.+++++.++.+.+.|.++|. + | +++ +.++.+ +.+++. .++||+.|= ++++.++.+++.
T Consensus 199 ~~~~~a~~~~~~l~~~~i~~iE---q---P----~~~-~~~~~~----~~l~~~---~~ipIa~dE~~~~~~~~~~~i~~ 260 (370)
T 1nu5_A 199 WDEQTASIWIPRLEEAGVELVE---Q---P----VPR-ANFGAL----RRLTEQ---NGVAILADESLSSLSSAFELARD 260 (370)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEE---C---C----SCT-TCHHHH----HHHHHH---CSSEEEESTTCCSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCcceEe---C---C----CCc-ccHHHH----HHHHHh---CCCCEEeCCCCCCHHHHHHHHHh
Confidence 4789999999999999999987 2 2 211 122222 333443 378999974 478999999998
Q ss_pred C-CCEEec-CC---CCCCCchHHHHHHhcCCCEEEEcC
Q 038230 309 G-AHIVND-VS---AGQLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 309 G-~~iINd-Vs---g~~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
| +++||= ++ |.+.--+++.+|+.+|.++++-++
T Consensus 261 ~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~ 298 (370)
T 1nu5_A 261 HAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGTM 298 (370)
T ss_dssp TCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCS
T ss_pred CCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecCC
Confidence 5 788872 11 211114688899999999886444
No 465
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=51.25 E-value=1.2e+02 Score=26.94 Aligned_cols=129 Identities=18% Similarity=0.173 Sum_probs=75.6
Q ss_pred HHHHHHHHcCCCEEEeCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCe-EEE----eCCCHHHHHHHHHcCCC
Q 038230 238 SQVRLMISEGADMIDIGAQS-TRPMATKISAEKELERLIPVLEAVLTMPEMEGKL-VSV----DTFYSKVASEAVGKGAH 311 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eS-trP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~p-ISI----DT~~~~v~~aaL~~G~~ 311 (480)
+.++++.++|- +||.-| +-+.....+.++..+.+....+.|++.. +.+ ... =.+++.+.+.+-+.|-.
T Consensus 47 ~~~~~~~~~Gh---eIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~---G~~~~~fr~P~G~~~~~~~~~~~~~G~~ 120 (195)
T 2cc0_A 47 SLVRAQVDAGM---WVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAG---GGTPKLFRPPYGETNATLRSVEAKYGLT 120 (195)
T ss_dssp HHHHHHHHTTC---EEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHTT---SCCCSEECCGGGCCCHHHHHHHHHTTCE
T ss_pred HHHHHHHHCCC---EEEcCCCCccccccCCHHHHHHHHHHHHHHHHHHh---CCCCCEEECCCCCcCHHHHHHHHHCCCe
Confidence 56788999993 555432 3344455677666666666666666542 221 111 23567777777777876
Q ss_pred EEe-cCCCCCC---C-chHHHHHHhc-CCCEEEEcCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 038230 312 IVN-DVSAGQL---D-PDMYKVVAGL-KVPYVAMHMRGDPSTMQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRII 385 (480)
Q Consensus 312 iIN-dVsg~~~---d-~~m~~l~~~~-~~~vVlmh~~g~p~~~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~Ii 385 (480)
++. ++....+ . +.+...+++. .-.+|+||... +. ..+.|.+.++.+++.|+. =+-
T Consensus 121 ~v~w~~d~~Dw~~~~~~~i~~~~~~~~~g~IiL~Hd~~-~~----------------t~~al~~ii~~l~~~Gy~--~v~ 181 (195)
T 2cc0_A 121 EVIWDVDSQDWNNASTDAIVQAVSRLGNGQVILMHDWP-AN----------------TLAAIPRIAQTLAGKGLC--SGM 181 (195)
T ss_dssp ECCCSEECCGGGTCCHHHHHHHHHTCCTTCEEEEESSC-HH----------------HHHHHHHHHHHHHHTTEE--ECE
T ss_pred EEEeccCCCccCCCCHHHHHHHHhCcCcCeEEEECCCc-hh----------------HHHHHHHHHHHHHHCCCE--EEE
Confidence 652 2322111 1 3455555543 34699999641 11 125678889999999986 356
Q ss_pred EecCCC
Q 038230 386 IDPGLG 391 (480)
Q Consensus 386 lDPgiG 391 (480)
+++..|
T Consensus 182 l~~~~~ 187 (195)
T 2cc0_A 182 ISPQTG 187 (195)
T ss_dssp ECTTTS
T ss_pred eCcccC
Confidence 676554
No 466
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=51.18 E-value=52 Score=31.72 Aligned_cols=109 Identities=21% Similarity=0.192 Sum_probs=68.1
Q ss_pred cCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCC
Q 038230 219 LTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFY 298 (480)
Q Consensus 219 ~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~ 298 (480)
+|| |.+.|. .|.+...++++.++++ +|-|=++| ||.-+. ..|. +|..++...+ .+. ..+.+.+=+.+
T Consensus 7 vTP--f~~dg~-iD~~~l~~lv~~li~~-v~gl~v~G-ttGE~~-~Ls~-~Er~~v~~~~---~~r---vpviaGvg~~~ 73 (283)
T 2pcq_A 7 PTP--FDREGR-LDEEAFRELAQALEPL-VDGLLVYG-SNGEGV-HLTP-EERARGLRAL---RPR---KPFLVGLMEET 73 (283)
T ss_dssp CCC--BCTTCC-BCHHHHHHHHHHHGGG-SSCCEETC-TTTTGG-GSCH-HHHHHHHHTC---CCS---SCCEEEECCSS
T ss_pred eCC--CCCCCC-cCHHHHHHHHHHHHhh-CCEEEECC-cCcCch-hcCH-HHHHHHHHHH---HhC---CcEEEeCCCCC
Confidence 688 765553 6899999999999999 99999987 444332 3444 5666654433 332 35666666555
Q ss_pred HH-HH---HHHHHcCCCEEecCCCCC----CCch---HHHHHHhcCCCEEEEcC
Q 038230 299 SK-VA---SEAVGKGAHIVNDVSAGQ----LDPD---MYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 299 ~~-v~---~aaL~~G~~iINdVsg~~----~d~~---m~~l~~~~~~~vVlmh~ 341 (480)
.+ ++ +.|-+.|+|-+--+...- .+++ -+.-+++ +.|+++-+.
T Consensus 74 t~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~-~lPiilYn~ 126 (283)
T 2pcq_A 74 LPQAEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE-KMPLFLYHV 126 (283)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH-HSCEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc-CCCEEEEeC
Confidence 33 33 334456999776665421 1233 3445556 899998664
No 467
>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*
Probab=51.07 E-value=48 Score=33.85 Aligned_cols=92 Identities=16% Similarity=0.139 Sum_probs=61.5
Q ss_pred HHHHHH-HHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHH----
Q 038230 233 VEAAVS-QVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVG---- 307 (480)
Q Consensus 233 ~e~a~~-~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~---- 307 (480)
.+++++ .++.+.+.|+|+ -|+.-||.|..+ +..++++. +++.+.. .-.|+ ...--+.+|++
T Consensus 120 ~~e~v~~vv~~lk~~~~DV-vIn~~STE~~~p-~gs~~~l~------~ai~~~~---~~~i~---aS~~YA~AAl~~~~~ 185 (394)
T 1vjp_A 120 LKEAVDTLVKEWTELDPDV-IVNTCTTEAFVP-FGNKEDLL------KAIENND---KERLT---ATQVYAYAAALYANK 185 (394)
T ss_dssp HHHHHHHHHHHHHHHCCSE-EEECCCCCCCCC-CSSHHHHH------HHHHTTC---TTTCC---HHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHcCCCE-EEEecCccCCCC-CCCHHHHH------HHHhcCC---CCccC---hHHHHHHHHHhhccc
Confidence 456664 678899999995 488889998754 34434333 4455431 11122 22234568888
Q ss_pred -cCCCEEecCCCCC-CCchHHHHHHhcCCCEEE
Q 038230 308 -KGAHIVNDVSAGQ-LDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 -~G~~iINdVsg~~-~d~~m~~l~~~~~~~vVl 338 (480)
+|+..||-.-... .+|.+.+++.+.|++++-
T Consensus 186 ~aG~~fVN~~P~~ia~~P~~~ela~~~gvpi~G 218 (394)
T 1vjp_A 186 RGGAAFVNVIPTFIANDPAFVELAKENNLVVFG 218 (394)
T ss_dssp HTCEEEEECSSSCSTTCHHHHHHHHHTTEEEEC
T ss_pred cCCcceEecCCccccCCHHHHHHHHHcCCCEEc
Confidence 8999999776532 359999999999998774
No 468
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=51.03 E-value=13 Score=38.41 Aligned_cols=24 Identities=25% Similarity=0.166 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEeCCCC
Q 038230 233 VEAAVSQVRLMISEGADMIDIGAQS 257 (480)
Q Consensus 233 ~e~a~~~A~~~v~~GAdiIDIG~eS 257 (480)
.++-++-++++. .-||+||||..|
T Consensus 198 ~~Dy~~~a~~l~-~~ad~ieiNiSc 221 (415)
T 3i65_A 198 VDDLKYCINKIG-RYADYIAINVSS 221 (415)
T ss_dssp HHHHHHHHHHHG-GGCSEEEEECCC
T ss_pred HHHHHHHHHHHH-hhCCEEEEECCC
Confidence 556666666654 459999999855
No 469
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=50.95 E-value=30 Score=34.49 Aligned_cols=65 Identities=14% Similarity=0.007 Sum_probs=38.4
Q ss_pred HHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEecCCCCCCC-chHHHHHHhcCCCEEEEcCCCC
Q 038230 275 IPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVNDVSAGQLD-PDMYKVVAGLKVPYVAMHMRGD 344 (480)
Q Consensus 275 ~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINdVsg~~~d-~~m~~l~~~~~~~vVlmh~~g~ 344 (480)
...++..++......+.+.+||+ +.+++|+++|+|+|--=+ .+ +.|-+.++..+-.+.+..+.|+
T Consensus 219 ~~Av~~ar~~~p~~kIeVEVdtl--dea~eAl~aGaD~I~LDn---~~~~~l~~av~~l~~~v~ieaSGGI 284 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVETETL--AELEEAISAGADIIMLDN---FSLEMMREAVKINAGRAALENSGNI 284 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEESSH--HHHHHHHHTTCSEEEEES---CCHHHHHHHHHHHTTSSEEEEESSC
T ss_pred HHHHHHHHHhCCCCeEEEEECCH--HHHHHHHHcCCCEEEECC---CCHHHHHHHHHHhCCCCeEEEECCC
Confidence 34555555543223456788887 788999999999886322 23 3455555444334455556554
No 470
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=50.80 E-value=52 Score=33.45 Aligned_cols=107 Identities=9% Similarity=0.114 Sum_probs=68.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEE--eCCCCCCCC----------CCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC-
Q 038230 231 QSVEAAVSQVRLMISEGADMID--IGAQSTRPM----------ATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF- 297 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiID--IG~eStrP~----------a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~- 297 (480)
.++++..+.+++++++|-..+= +|.....|. ....+..+.+++-...++++++... .++.|.||..
T Consensus 152 ~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G-~~~~l~vDan~ 230 (421)
T 4hnl_A 152 DNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYG-NQFQMLHDVHE 230 (421)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHT-TSSEEEEECTT
T ss_pred CCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhC-CCceEeccccc
Confidence 3678999999999999998875 454221110 1122334455556666677776432 3789999975
Q ss_pred --CHHHHHHHHH----cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 298 --YSKVASEAVG----KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 298 --~~~v~~aaL~----~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
+++.+.+.++ .+..+|=+--.....+.+..+.++.+++++.
T Consensus 231 ~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~ 277 (421)
T 4hnl_A 231 RLHPNQAIQFAKAAEPYQLFFLEDILPPDQSHWLTQLRSQSATPIAT 277 (421)
T ss_dssp CSCHHHHHHHHHHHGGGCCSEEECCSCGGGGGGHHHHHTTCCCCEEE
T ss_pred cCCHHHHHHHHHHhhhhhhcccccCCcccchHHHHHHHhcCCCCeec
Confidence 4444433332 3888887654332236788888889999887
No 471
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=50.69 E-value=90 Score=32.11 Aligned_cols=94 Identities=10% Similarity=0.068 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC---CHHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF---YSKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~---~~~v~~aaL~ 307 (480)
.++++..+.|++++++|-..+-+-... +.+++++|+..+-+.+- .++.|.||.. +++.+.+.++
T Consensus 200 ~~~e~~~~~a~~~~~~Gf~~~KlKvG~--------~~~~d~~~v~avR~a~G-----~~~~l~vDaN~~~~~~~A~~~~~ 266 (441)
T 4a35_A 200 YSDDTLKQLCAQALKDGWTRFKVKVGA--------DLQDDMRRCQIIRDMIG-----PEKTLMMDANQRWDVPEAVEWMS 266 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSS--------CHHHHHHHHHHHHHHHC-----TTSEEEEECTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCC--------CHHHHHHHHHHHHHHhC-----CCCeEEEECCCCCCHHHHHHHHH
Confidence 478999999999999999999875311 46777887654433332 3789999964 4444333332
Q ss_pred ----cCCCEEecCCCCCCC-chHHHHHHh---cCCCEEE
Q 038230 308 ----KGAHIVNDVSAGQLD-PDMYKVVAG---LKVPYVA 338 (480)
Q Consensus 308 ----~G~~iINdVsg~~~d-~~m~~l~~~---~~~~vVl 338 (480)
.+..+|-+-.... + +.+..+.+. .++|+..
T Consensus 267 ~L~~~~~~~iEeP~~~~-d~~~~~~l~~~l~~~~iPIa~ 304 (441)
T 4a35_A 267 KLAKFKPLWIEEPTSPD-DILGHATISKALVPLGIGIAT 304 (441)
T ss_dssp HHGGGCCSEEECCSCTT-CHHHHHHHHHHHGGGTCEEEE
T ss_pred hhcccCccEEeCCCCcc-cHHHHHHHHHhccCCCCCEEe
Confidence 3788887665432 3 456666665 7788776
No 472
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=50.68 E-value=84 Score=29.87 Aligned_cols=101 Identities=19% Similarity=0.179 Sum_probs=57.3
Q ss_pred cCCHHHHHHHHHHHHHc-CCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCe-EEEeCCCHHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISE-GADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKL-VSVDTFYSKVASEAVG 307 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~-GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~p-ISIDT~~~~v~~aaL~ 307 (480)
+.+.+++...++...+. |+++|-+..-...|.. . +|...+...++.+... ++. +.+.+.+++.++++.+
T Consensus 75 ~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~~~--~---~e~~~~~~~a~~~~~~----g~~vi~~~~~~~~~a~~~~~ 145 (264)
T 1xm3_A 75 ASTAEEAVRIARLAKASGLCDMIKVEVIGCSRSL--L---PDPVETLKASEQLLEE----GFIVLPYTSDDVVLARKLEE 145 (264)
T ss_dssp CSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTTC--C---BCHHHHHHHHHHHHHT----TCCEEEEECSCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCeEEEeecCCCccc--c---cchHHHHHHHHHHHCC----CeEEEEEcCCCHHHHHHHHH
Confidence 56788888777776665 6777666543333310 1 2233343444443322 332 3255556788999999
Q ss_pred cCCCEEecC---CCCC---CCchHHHHHHh-cCCCEEEE
Q 038230 308 KGAHIVNDV---SAGQ---LDPDMYKVVAG-LKVPYVAM 339 (480)
Q Consensus 308 ~G~~iINdV---sg~~---~d~~m~~l~~~-~~~~vVlm 339 (480)
.|+++|-.. .|.. ..++.++.+++ .+.|+|+.
T Consensus 146 ~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv~ 184 (264)
T 1xm3_A 146 LGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVD 184 (264)
T ss_dssp HTCSCBEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEE
T ss_pred hCCCEEEECCcccCCCCCCCCHHHHHHHHhcCCCCEEEE
Confidence 999998442 2211 12456666655 46788875
No 473
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=50.52 E-value=1.5e+02 Score=28.07 Aligned_cols=89 Identities=11% Similarity=0.119 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCCEEecCC-----CCCCC-chHHHHHHhcCCCEEEEcCCCCCCccccccc----cchhhHHHHHHHHHH
Q 038230 299 SKVASEAVGKGAHIVNDVS-----AGQLD-PDMYKVVAGLKVPYVAMHMRGDPSTMQNEEN----LQYDDVCKQVASELY 368 (480)
Q Consensus 299 ~~v~~aaL~~G~~iINdVs-----g~~~d-~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~----~~~~~v~~ev~~~l~ 368 (480)
.+.++.+-++|.+-|--.. ....+ +++.+.++++|..++.+|....+........ .......++..+.++
T Consensus 32 ~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 111 (303)
T 3l23_A 32 AANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWK 111 (303)
T ss_dssp HHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHHHHH
Confidence 3566777777877664221 01112 5688899999999998886431111100000 000112245567889
Q ss_pred HHHHHHHHCCCCCCCEEEecCC
Q 038230 369 SKVRDAELSGIPAWRIIIDPGL 390 (480)
Q Consensus 369 ~~i~~a~~~Gi~~~~IilDPgi 390 (480)
+.++.|.+.|.+ .|++ |+.
T Consensus 112 ~~i~~A~~lG~~--~v~~-~~~ 130 (303)
T 3l23_A 112 ATAADHAKLGCK--YLIQ-PMM 130 (303)
T ss_dssp HHHHHHHHTTCS--EEEE-CSC
T ss_pred HHHHHHHHcCCC--EEEE-CCC
Confidence 999999999997 5665 654
No 474
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=50.22 E-value=47 Score=32.39 Aligned_cols=119 Identities=16% Similarity=0.206 Sum_probs=71.4
Q ss_pred cEEEEEEecCCCCCCCCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHH---HHHHHHHHHHcCCcC
Q 038230 211 TSVMGILNLTPDSFSDGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELE---RLIPVLEAVLTMPEM 287 (480)
Q Consensus 211 ~~imGIlN~tpDSFsdgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~---rl~~vi~~l~~~~~~ 287 (480)
++|-.++| |--|. .+.+.-+..+++.+++|||-||+-.. .++ + .+.+++ .+..-|.++++...
T Consensus 90 v~v~tVig-----FP~G~--~~~~~Kv~E~~~Av~~GAdEIDmVin---ig~--l-ksg~~~~~~~v~~eI~~v~~a~~- 155 (281)
T 2a4a_A 90 PKIACVIN-----FPYGT--DSMEKVLNDTEKALDDGADEIDLVIN---YKK--I-IENTDEGLKEATKLTQSVKKLLT- 155 (281)
T ss_dssp SEEEEEES-----TTTCC--SCHHHHHHHHHHHHHHTCSEEEEECC---HHH--H-HHSHHHHHHHHHHHHHHHHTTCT-
T ss_pred ceEEEEeC-----CCCCC--CCHHHHHHHHHHHHHcCCCEEEEecc---hHh--h-hCCChhHHHHHHHHHHHHHHHhc-
Confidence 56666654 33332 46677888899999999999998641 010 0 012344 56666677776532
Q ss_pred CCCe--EEEeC---CCHH----HHHHHHHcCCCEEecCCCCC-C-----C-chHHHHHHhc-------CCCEEEEcCCCC
Q 038230 288 EGKL--VSVDT---FYSK----VASEAVGKGAHIVNDVSAGQ-L-----D-PDMYKVVAGL-------KVPYVAMHMRGD 344 (480)
Q Consensus 288 ~~~p--ISIDT---~~~~----v~~aaL~~G~~iINdVsg~~-~-----d-~~m~~l~~~~-------~~~vVlmh~~g~ 344 (480)
+.| +-|.| .+++ ..+.|.++|+|+|---+|.. . + .-|.+.++++ +..+=+-...|+
T Consensus 156 -~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGI 234 (281)
T 2a4a_A 156 -NKILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGI 234 (281)
T ss_dssp -TSEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSC
T ss_pred -CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCC
Confidence 334 35555 3344 34556678999999777754 1 2 3477888766 655444445553
No 475
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=50.04 E-value=54 Score=32.37 Aligned_cols=89 Identities=15% Similarity=0.142 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.+++++.++.+.+.|.++|+= | +++ +.++. .+.|++. .++||+.|= ++++.++.+++.
T Consensus 200 ~~~~~a~~~~~~l~~~~i~~iE~------P----~~~-~~~~~----~~~l~~~---~~iPI~~de~~~~~~~~~~~i~~ 261 (359)
T 1mdl_A 200 LDVPAAIKRSQALQQEGVTWIEE------P----TLQ-HDYEG----HQRIQSK---LNVPVQMGENWLGPEEMFKALSI 261 (359)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEC------C----SCT-TCHHH----HHHHHHT---CSSCEEECTTCCSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCCeEEC------C----CCh-hhHHH----HHHHHHh---CCCCEEeCCCCCCHHHHHHHHHc
Confidence 47899999999999999999962 2 111 11222 2344554 479999975 478999999998
Q ss_pred C-CCEEecCCCCC-----CCchHHHHHHhcCCCEEE
Q 038230 309 G-AHIVNDVSAGQ-----LDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 309 G-~~iINdVsg~~-----~d~~m~~l~~~~~~~vVl 338 (480)
| +++|| +.-.. .--+++.+|+.+|.++++
T Consensus 262 ~~~d~v~-ik~~~~GGi~~~~~i~~~A~~~g~~~~~ 296 (359)
T 1mdl_A 262 GACRLAM-PDAMKIGGVTGWIRASALAQQFGIPMSS 296 (359)
T ss_dssp TCCSEEC-CBTTTTTHHHHHHHHHHHHHHTTCCBCC
T ss_pred CCCCEEe-ecchhhCCHHHHHHHHHHHHHcCCeEee
Confidence 5 88887 32111 014688899999999775
No 476
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=50.04 E-value=9.4 Score=38.12 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=54.0
Q ss_pred EecCCCCC--CCCCcc----CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCC
Q 038230 217 LNLTPDSF--SDGGKF----QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGK 290 (480)
Q Consensus 217 lN~tpDSF--sdgg~~----~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~ 290 (480)
+..+| +| -|-..| .+..+|+..+..=+++|||+|=|= |+-.+ ..+|+.+++. .++
T Consensus 218 a~Sap-~f~~GDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVK-----Pal~Y----------LDIir~vk~~---~~~ 278 (337)
T 1w5q_A 218 VGSAS-NLGKGNRATYQMDPANSDEALHEVAADLAEGADMVMVK-----PGMPY----------LDIVRRVKDE---FRA 278 (337)
T ss_dssp -----------CGGGTSBCTTCSHHHHHHHHHHHHTTCSEEEEE-----SCGGG----------HHHHHHHHHH---HCS
T ss_pred hcCCc-ccCCCCccccCCCCCChHHHHHHHHhhHHhCCCEEEEc-----CCCch----------HHHHHHHHHh---cCC
Confidence 45666 56 454444 345789999999999999999885 65433 2356666665 377
Q ss_pred eEEEe--CCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEc
Q 038230 291 LVSVD--TFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMH 340 (480)
Q Consensus 291 pISID--T~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh 340 (480)
|+..= |-...-+++|.++| +|+ . ..--|.+--.+..|+.+|+..
T Consensus 279 PvaaYqVSGEYAMikaAa~~G--wiD--~--~~v~Esl~~~kRAGAd~IiTY 324 (337)
T 1w5q_A 279 PTFVYQVSGEYAMHMGAIQNG--WLA--E--SVILESLTAFKRAGADGILTY 324 (337)
T ss_dssp CEEEEECHHHHHHHHHHHHTT--SSC--T--THHHHHHHHHHHHTCSEEEET
T ss_pred CEEEEEcCcHHHHHHHHHHcC--Ccc--H--HHHHHHHHHHHhcCCCEEeee
Confidence 87642 22344555666555 221 1 001234445566777777743
No 477
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=50.00 E-value=1.5e+02 Score=28.90 Aligned_cols=105 Identities=21% Similarity=0.168 Sum_probs=62.9
Q ss_pred CCccCC---HHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE----eC-CC
Q 038230 227 GGKFQS---VEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSV----DT-FY 298 (480)
Q Consensus 227 gg~~~~---~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI----DT-~~ 298 (480)
|+..++ .+..++.++.+.+.|||-|-+|+-. ..+ .++ .+++..+++... ++++.. |- .+
T Consensus 101 GdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~-~dg--~iD----~~~~~~Li~~a~------~l~vTFHRAFD~~~d 167 (287)
T 3iwp_A 101 GDFLYSDREIEVMKADIRLAKLYGADGLVFGALT-EDG--HID----KELCMSLMAICR------PLPVTFHRAFDMVHD 167 (287)
T ss_dssp SCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBC-TTS--CBC----HHHHHHHHHHHT------TSCEEECGGGGGCSC
T ss_pred CCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeC-CCC--CcC----HHHHHHHHHHcC------CCcEEEECchhccCC
Confidence 334444 4455678899999999999999721 111 123 556666666544 345543 21 23
Q ss_pred H-HHHHHHHHcCCCEEecCCCCCCC-----chHHHHHHhcCCCEEEEcCCCCC
Q 038230 299 S-KVASEAVGKGAHIVNDVSAGQLD-----PDMYKVVAGLKVPYVAMHMRGDP 345 (480)
Q Consensus 299 ~-~v~~aaL~~G~~iINdVsg~~~d-----~~m~~l~~~~~~~vVlmh~~g~p 345 (480)
| +.++..++.|.+-|.- +|.... +.+.++++.++-.+.+|.-.|..
T Consensus 168 ~~~Ale~Li~lGvdrILT-SG~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~ 219 (287)
T 3iwp_A 168 PMAALETLLTLGFERVLT-SGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGIT 219 (287)
T ss_dssp HHHHHHHHHHHTCSEEEE-CTTSSSTTTTHHHHHHHHHHHTTSSEEEECTTCC
T ss_pred HHHHHHHHHHcCCCEEEC-CCCCCChHHhHHHHHHHHHHhCCCCEEEECCCcC
Confidence 3 4555555569998863 553211 34666666777678888877753
No 478
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=49.99 E-value=32 Score=33.08 Aligned_cols=101 Identities=23% Similarity=0.250 Sum_probs=57.9
Q ss_pred CCCCCCcc-CCHHHHHHHHHHHHH-cCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe----C
Q 038230 223 SFSDGGKF-QSVEAAVSQVRLMIS-EGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD----T 296 (480)
Q Consensus 223 SFsdgg~~-~~~e~a~~~A~~~v~-~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID----T 296 (480)
+-..||++ .+.++-++.-+...+ .|+|+|||=.. .-...++.+.+. .++.+|-= |
T Consensus 97 t~~EGG~~~~~~~~y~~ll~~~~~~~~~dyIDVEl~----------------~~~~~~~~l~~~---~kiI~S~Hdf~~t 157 (259)
T 3l9c_A 97 TEKEGGNISLSNEDYLAIIRDIAALYQPDYIDFEYF----------------SYRDVLEEMYDF---SNLILSYHNFEET 157 (259)
T ss_dssp BGGGTCSBCCCHHHHHHHHHHHHHHHCCSEEEEEHH----------------HHGGGGGGGTTC---SSEEEEEEESSCC
T ss_pred ehhhCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECc----------------CCHHHHHHHHhc---CeEEEEeccCCCC
Confidence 35678876 455555555555555 69999999531 111223344433 36666663 2
Q ss_pred CC--HHHHHHHHHcCCCEEecCCCCCCCc---hHHHHHHh-----cCCCEEEEcCC
Q 038230 297 FY--SKVASEAVGKGAHIVNDVSAGQLDP---DMYKVVAG-----LKVPYVAMHMR 342 (480)
Q Consensus 297 ~~--~~v~~aaL~~G~~iINdVsg~~~d~---~m~~l~~~-----~~~~vVlmh~~ 342 (480)
.. -+..+++.+.|+|++-=+...+... .++.+..+ .+.|+|.|.|.
T Consensus 158 p~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG 213 (259)
T 3l9c_A 158 PENLMEVFSELTALAPRVVKIAVMPKNEQDVLDLMNYTRGFKTLNPNQEYVTMSMS 213 (259)
T ss_dssp CTTHHHHHHHHHHTCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 22 2345566667999988655443222 34444433 36899998874
No 479
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=49.61 E-value=38 Score=34.16 Aligned_cols=83 Identities=12% Similarity=0.121 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCC-CCCCCCC---------CCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEE--eCCC
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGA-QSTRPMA---------TKISAEKELERLIPVLEAVLTMPEMEGKLVSV--DTFY 298 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~-eStrP~a---------~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISI--DT~~ 298 (480)
.+.+++.+.|+...+.|||.|-+-. -..++.. ...|....+..-..+|..+++... .++||.. +-.+
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~-~~ipvI~~GGI~s 309 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQ-GRVPIIGVGGVSS 309 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTT-TCSCEEEESSCCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcC-CCceEEEECCCCC
Confidence 5667899999999999999888642 1123211 111211122222344555554421 1456555 4567
Q ss_pred HHHHHHHHHcCCCEEe
Q 038230 299 SKVASEAVGKGAHIVN 314 (480)
Q Consensus 299 ~~v~~aaL~~G~~iIN 314 (480)
++.+.+++++||+.+-
T Consensus 310 ~~da~~~l~~GAd~V~ 325 (367)
T 3zwt_A 310 GQDALEKIRAGASLVQ 325 (367)
T ss_dssp HHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHcCCCEEE
Confidence 8888888888887775
No 480
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=49.46 E-value=15 Score=36.75 Aligned_cols=93 Identities=14% Similarity=0.082 Sum_probs=62.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.++ ++.++.+.+.|.++|+ +...|. .-+.+.++ ++. .++||+.|= +++..++.+++.
T Consensus 193 ~~~~~-~~~~~~l~~~~i~~iE---qP~~~~-----d~~~~~~l-------~~~---~~ipIa~dE~~~~~~~~~~~i~~ 253 (369)
T 2zc8_A 193 YSLAN-LAQLKRLDELRLDYIE---QPLAYD-----DLLDHAKL-------QRE---LSTPICLDESLTGAEKARKAIEL 253 (369)
T ss_dssp CCGGG-HHHHHGGGGGCCSCEE---CCSCTT-----CSHHHHHH-------HHH---CSSCEEESTTCCSHHHHHHHHHH
T ss_pred CCHHH-HHHHHHHHhCCCcEEE---CCCCcc-----cHHHHHHH-------Hhh---CCCCEEEcCccCCHHHHHHHHHh
Confidence 35667 8888888888999998 222111 11334333 333 378999985 478899999988
Q ss_pred C-CCEEec-CC---CCCCCchHHHHHHhcCCCEEEEcCC
Q 038230 309 G-AHIVND-VS---AGQLDPDMYKVVAGLKVPYVAMHMR 342 (480)
Q Consensus 309 G-~~iINd-Vs---g~~~d~~m~~l~~~~~~~vVlmh~~ 342 (480)
| +++||= ++ |.+.--+++.+|+++|.++++.|+-
T Consensus 254 ~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 292 (369)
T 2zc8_A 254 GAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGML 292 (369)
T ss_dssp TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred CCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 6 788872 22 2111147899999999999888874
No 481
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=49.46 E-value=17 Score=36.86 Aligned_cols=90 Identities=9% Similarity=-0.019 Sum_probs=61.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.+++++.++++.+.|.++|+= | +++ +.++. .+.|++. .++||+.|= ++++.++.+++.
T Consensus 218 ~~~~~a~~~~~~l~~~~i~~iE~------P----~~~-~~~~~----~~~l~~~---~~iPIa~dE~~~~~~~~~~~i~~ 279 (393)
T 2og9_A 218 WDRPTAQRMCRIFEPFNLVWIEE------P----LDA-YDHEG----HAALALQ---FDTPIATGEMLTSAAEHGDLIRH 279 (393)
T ss_dssp CCHHHHHHHHHHHGGGCCSCEEC------C----SCT-TCHHH----HHHHHHH---CSSCEEECTTCCSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhhCCCEEEC------C----CCc-ccHHH----HHHHHHh---CCCCEEeCCCcCCHHHHHHHHHC
Confidence 47899999999998899999972 2 111 11222 2333443 378999985 478999999998
Q ss_pred C-CCEEec-CC---CCCCCchHHHHHHhcCCCEEE
Q 038230 309 G-AHIVND-VS---AGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 309 G-~~iINd-Vs---g~~~d~~m~~l~~~~~~~vVl 338 (480)
| +|+||= ++ |.+.--+++.+|+.+|.+++.
T Consensus 280 ~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~ 314 (393)
T 2og9_A 280 RAADYLMPDAPRVGGITPFLKIASLAEHAGLMLAP 314 (393)
T ss_dssp TCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECC
T ss_pred CCCCEEeeCccccCCHHHHHHHHHHHHHcCCEEec
Confidence 6 888872 11 211114689999999999873
No 482
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=49.16 E-value=47 Score=33.38 Aligned_cols=94 Identities=13% Similarity=0.063 Sum_probs=63.0
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVG 307 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~ 307 (480)
..+.++|++.++++-+.|..+|. | | +++ +.++-+ ..|++. +++||+.| -+++.-++.+++
T Consensus 203 ~~~~~~A~~~~~~l~~~~i~~iE---e---P----~~~-~d~~~~----~~l~~~---~~ipIa~dE~~~~~~~~~~~~~ 264 (381)
T 3fcp_A 203 AWDAATGAKGCRELAAMGVDLIE---Q---P----VSA-HDNAAL----VRLSQQ---IETAILADEAVATAYDGYQLAQ 264 (381)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEE---C---C----BCT-TCHHHH----HHHHHH---SSSEEEESTTCCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCcccee---C---C----CCc-ccHHHH----HHHHHh---CCCCEEECCCcCCHHHHHHHHH
Confidence 35789999999999998988885 2 2 221 112222 233443 37999998 456788888998
Q ss_pred c-CCCEEec----CCCCCCCchHHHHHHhcCCCEEEEcC
Q 038230 308 K-GAHIVND----VSAGQLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 308 ~-G~~iINd----Vsg~~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
. +++++|= +-|.+.--+++.+|..+|.++++-++
T Consensus 265 ~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~ 303 (381)
T 3fcp_A 265 QGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTM 303 (381)
T ss_dssp TTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCS
T ss_pred cCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCCC
Confidence 7 5888872 12222225788999999999976433
No 483
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=49.11 E-value=15 Score=37.90 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=67.1
Q ss_pred EEEEEecCCCCCCCC--CccCCHHHHHHHHHHHHH-cCCCEEEeCCCCC----CCCCCCCCHHHHHHHHHHHHHHHHcCC
Q 038230 213 VMGILNLTPDSFSDG--GKFQSVEAAVSQVRLMIS-EGADMIDIGAQST----RPMATKISAEKELERLIPVLEAVLTMP 285 (480)
Q Consensus 213 imGIlN~tpDSFsdg--g~~~~~e~a~~~A~~~v~-~GAdiIDIG~eSt----rP~a~~v~~~eE~~rl~~vi~~l~~~~ 285 (480)
.+|+ =++|+.|.+| | .+.++.++.|+.+.+ .|+|+|+|-+... ... ........+ +.++.+++..
T Consensus 244 ~v~v-Ris~~~~~~~~~G--~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~-~~~g~~~~~----~~a~~Ik~~v 315 (419)
T 3l5a_A 244 ILGF-RATPEETRGSDLG--YTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTS-RTPGDHFGR----PVNQIVYEHL 315 (419)
T ss_dssp EEEE-EECSCEEETTEEE--ECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBC-CCSSTTTTS----BHHHHHHHHH
T ss_pred eEEE-ecccccccCCCCC--CCHHHHHHHHHHHHhhcCCcEEEEeeCCcccccccc-CCCCccccH----HHHHHHHHHc
Confidence 3443 5688888887 5 467899999999999 9999999975321 000 000000011 1222333221
Q ss_pred cCCCCeEEE--eCCCHHHHHHHHHcCCCEEecCCCCCCCchHHHHHHhc
Q 038230 286 EMEGKLVSV--DTFYSKVASEAVGKGAHIVNDVSAGQLDPDMYKVVAGL 332 (480)
Q Consensus 286 ~~~~~pISI--DT~~~~v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~ 332 (480)
. .++||.. +-++++.++++|+. +|+|-=-.+.-.+|.+..-+++-
T Consensus 316 ~-~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~IanPdlv~ki~~G 362 (419)
T 3l5a_A 316 A-GRIPLIASGGINSPESALDALQH-ADMVGMSSPFVTEPDFVHKLAEQ 362 (419)
T ss_dssp T-TSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHHCTTHHHHHHTT
T ss_pred C-CCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHHCcHHHHHHHcC
Confidence 0 1356554 33689999999999 99886444443468877766653
No 484
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=48.95 E-value=30 Score=36.00 Aligned_cols=103 Identities=13% Similarity=0.040 Sum_probs=66.0
Q ss_pred CCCccCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCC-CeEEEeC---CCHHH
Q 038230 226 DGGKFQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEG-KLVSVDT---FYSKV 301 (480)
Q Consensus 226 dgg~~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~-~pISIDT---~~~~v 301 (480)
|++++.+.+++++..+++++.- .++=|= +|+++ ++|+-... |++. .+ +||.-|- ++++-
T Consensus 274 ~~~~~~t~~elid~y~~lle~y-pI~~IE--------DPl~~-dD~eg~a~----Lt~~---lg~i~IvGDEl~vTn~~~ 336 (441)
T 3qtp_A 274 DPSLVKDVDGLIAEYVDYGKHY-PIASIE--------DPFAE-DDWAAWNK----FTVE---HGNFQIVGDDLLVTNPAR 336 (441)
T ss_dssp CGGGEECHHHHHHHHHHHHHHS-CEEEEE--------SCSCT-TCHHHHHH----HHHH---TTTSEEEESTTTTTCHHH
T ss_pred ccccccCHHHHHHHHHHHhhhc-ceeeec--------CCCCh-HHHHHHHH----HHHh---cCCceEEeccccccCHHH
Confidence 4456788999999999988752 244331 12222 33444322 2333 23 8899984 37999
Q ss_pred HHHHHHcC-CCEEe-cCC---CCCCCchHHHHHHhcCCCEEEEcCCCCC
Q 038230 302 ASEAVGKG-AHIVN-DVS---AGQLDPDMYKVVAGLKVPYVAMHMRGDP 345 (480)
Q Consensus 302 ~~aaL~~G-~~iIN-dVs---g~~~d~~m~~l~~~~~~~vVlmh~~g~p 345 (480)
++.+++.+ +++|| +++ +.+.--++..+|+.+|..+++-|..|..
T Consensus 337 i~~~Ie~~a~n~IlIKvnqiGGITEalkaa~lA~~~G~~vmvsHrsgET 385 (441)
T 3qtp_A 337 VQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMASHRSGET 385 (441)
T ss_dssp HHHHHHHTCCSEEEECGGGTCCHHHHHHHHHHHHHTTCEEEEECCSSCC
T ss_pred HHHHHHcCCCCEEEecccccccHHHHHHHHHHHHHcCCeEEEeCCCCCc
Confidence 99999985 55555 222 1111146888999999999999986654
No 485
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=48.79 E-value=1.4e+02 Score=29.63 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.+++++.++.+.+.|.++|+=- ..| ..-+.+.++ ++. .++||+.|= ++++.++.+++.
T Consensus 202 ~~~~~a~~~~~~l~~~~i~~iEqP---~~~-----~d~~~~~~l-------~~~---~~iPI~~dE~~~~~~~~~~~i~~ 263 (371)
T 2ovl_A 202 WTVDGAIRAARALAPFDLHWIEEP---TIP-----DDLVGNARI-------VRE---SGHTIAGGENLHTLYDFHNAVRA 263 (371)
T ss_dssp SCHHHHHHHHHHHGGGCCSEEECC---SCT-----TCHHHHHHH-------HHH---HCSCEEECTTCCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEECC---CCc-----ccHHHHHHH-------Hhh---CCCCEEeCCCCCCHHHHHHHHHc
Confidence 478999999999999999999722 111 011333333 332 268999875 478999999988
Q ss_pred C-CCEEec-CCC--C-CCCchHHHHHHhcCCCEEE
Q 038230 309 G-AHIVND-VSA--G-QLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 309 G-~~iINd-Vsg--~-~~d~~m~~l~~~~~~~vVl 338 (480)
| +++||= ++- + +.--+++.+|+.+|.++++
T Consensus 264 ~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~ 298 (371)
T 2ovl_A 264 GSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTS 298 (371)
T ss_dssp TCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEeeCccccCCHHHHHHHHHHHHHcCCeEcc
Confidence 5 888872 221 1 1014688899999999887
No 486
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=48.37 E-value=29 Score=32.56 Aligned_cols=57 Identities=12% Similarity=-0.003 Sum_probs=38.8
Q ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCCCHHHHHHHHHcCCCEEec
Q 038230 238 SQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTFYSKVASEAVGKGAHIVND 315 (480)
Q Consensus 238 ~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~~~~v~~aaL~~G~~iINd 315 (480)
++++..++.|||++-.|.. + . ++++..+.. ++++-+-...++.+.+|++.|+|+|-=
T Consensus 89 d~~~~A~~aGAd~v~~p~~---------d--~------~v~~~~~~~----g~~~i~G~~t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVTPGI---------T--E------DILEAGVDS----EIPLLPGISTPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp HHHHHHHHHTCSSEECSSC---------C--H------HHHHHHHHC----SSCEECEECSHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEeCCC---------C--H------HHHHHHHHh----CCCEEEeeCCHHHHHHHHHCCCCEEEE
Confidence 5677888899999976631 1 1 233333443 455544577789999999999998863
No 487
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=48.20 E-value=40 Score=33.74 Aligned_cols=90 Identities=18% Similarity=0.171 Sum_probs=62.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.+++++.++.+.+.|. +|.= | ++ .++ ..+.|++. .++||..|= ++++.++.+++.
T Consensus 200 ~~~~~a~~~~~~l~~~~i-~iE~------P----~~---~~~----~~~~l~~~---~~iPI~~de~i~~~~~~~~~i~~ 258 (379)
T 2rdx_A 200 WRVDNAIRLARATRDLDY-ILEQ------P----CR---SYE----ECQQVRRV---ADQPMKLDECVTGLHMAQRIVAD 258 (379)
T ss_dssp SCHHHHHHHHHHTTTSCC-EEEC------C----SS---SHH----HHHHHHTT---CCSCEEECTTCCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCe-EEeC------C----cC---CHH----HHHHHHhh---CCCCEEEeCCcCCHHHHHHHHHc
Confidence 478999999999888899 8852 2 22 122 23444555 489999974 478999999998
Q ss_pred C-CCEEec-CCC--C-CCCchHHHHHHhcCCCEEEEcC
Q 038230 309 G-AHIVND-VSA--G-QLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 309 G-~~iINd-Vsg--~-~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
| +|+||= ++- + +.--+++.+|+.+|.++++-.+
T Consensus 259 ~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~ 296 (379)
T 2rdx_A 259 RGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAEDS 296 (379)
T ss_dssp TCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEeec
Confidence 5 888872 321 1 1114688899999999877433
No 488
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=48.12 E-value=71 Score=33.51 Aligned_cols=102 Identities=21% Similarity=0.243 Sum_probs=60.0
Q ss_pred CCCCCccC-CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCc-CCCCeEEEe----CC
Q 038230 224 FSDGGKFQ-SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPE-MEGKLVSVD----TF 297 (480)
Q Consensus 224 Fsdgg~~~-~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~-~~~~pISID----T~ 297 (480)
-..||++. +.++-++.-+..++.|+++|||=.. .-...++.+.+... .+++.+|-= |.
T Consensus 68 ~~eGG~~~~~~~~~~~ll~~~~~~~~~yiDvEl~----------------~~~~~~~~~~~~~~~~~kiI~S~H~f~~tp 131 (523)
T 2o7s_A 68 KWEGGQYEGDENERRDVLRLAMELGADYIDVELQ----------------VASEFIKSIDGKKPGKFKVIVSSHNYQNTP 131 (523)
T ss_dssp GGGTSSBCSCHHHHHHHHHHHHHHTCSEEEEEHH----------------HHHHHHHHTTTCCCTTCEEEEEEECSSCCC
T ss_pred cccCCCCCCCHHHHHHHHHHHHHhCCCEEEEECC----------------CchHHHHHHHHhccCCCEEEEEcccCCCCc
Confidence 35677663 4455555566667789999999431 11122333433211 245677762 55
Q ss_pred CHHHH----HHHHHcCCCEEecCCCCCCC---chHHHHHHhcCCCEEEEcC
Q 038230 298 YSKVA----SEAVGKGAHIVNDVSAGQLD---PDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 298 ~~~v~----~aaL~~G~~iINdVsg~~~d---~~m~~l~~~~~~~vVlmh~ 341 (480)
+.+.+ +.+.+.|+|++-=+...+.. -+++.+..+.+.|+|.|.|
T Consensus 132 ~~~~~~~~~~~~~~~gaDivKia~~a~~~~D~~~l~~~~~~~~~p~i~~~M 182 (523)
T 2o7s_A 132 SVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVM 182 (523)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEEEECSSGGGHHHHHHHHHHCSSCEEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEc
Confidence 44544 45555799998755543322 3466666778899998876
No 489
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=48.06 E-value=17 Score=36.94 Aligned_cols=90 Identities=8% Similarity=0.011 Sum_probs=62.8
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVG 307 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~ 307 (480)
-.+.++|++.++++.+.|.++|+= ...|. .++ ....|++. +++||+.| -+++..++.+++
T Consensus 211 ~~~~~~A~~~~~~L~~~~i~~iEq---P~~~~--------~~~----~~~~l~~~---~~iPIa~dE~~~~~~~~~~~i~ 272 (401)
T 3sbf_A 211 RLFPNQAIQFAKEVEQYKPYFIED---ILPPN--------QTE----WLDNIRSQ---SSVSLGLGELFNNPEEWKSLIA 272 (401)
T ss_dssp CSCHHHHHHHHHHHGGGCCSCEEC---SSCTT--------CGG----GHHHHHTT---CCCCEEECTTCCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEC---CCChh--------HHH----HHHHHHhh---CCCCEEeCCccCCHHHHHHHHh
Confidence 357899999999999999999982 22221 111 13445655 58999998 457889999998
Q ss_pred cC-CCEEecCC----CC-CCCchHHHHHHhcCCCEEE
Q 038230 308 KG-AHIVNDVS----AG-QLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ~G-~~iINdVs----g~-~~d~~m~~l~~~~~~~vVl 338 (480)
.| +++|| +. |+ +.--+++.+|..+|.+++.
T Consensus 273 ~~~~d~v~-~k~~~~GGit~~~kia~~A~~~gi~~~~ 308 (401)
T 3sbf_A 273 NRRIDFIR-CHVSQIGGITPALKLGHLCQNFGVRIAW 308 (401)
T ss_dssp TTCCSEEC-CCGGGGTSHHHHHHHHHHHHHHTCEECC
T ss_pred cCCCCEEe-cCccccCCHHHHHHHHHHHHHcCCEEEe
Confidence 85 88887 32 11 1114688999999999764
No 490
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=48.06 E-value=1.2e+02 Score=29.87 Aligned_cols=91 Identities=11% Similarity=0.077 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC---CCHHHHHHH---
Q 038230 232 SVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT---FYSKVASEA--- 305 (480)
Q Consensus 232 ~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT---~~~~v~~aa--- 305 (480)
++++..+.|++++++|-+.|.|.... +.+.+. ..++++++... .+++|.||. ++++.+.+.
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g~--------~~~~~~----e~v~avr~a~g-~~~~l~vDan~~~~~~~a~~~~~~ 212 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKISG--------EPVTDA----KRITAALANQQ-PDEFFIVDANGKLSVETALRLLRL 212 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECCS--------CHHHHH----HHHHHHTTTCC-TTCEEEEECTTBCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhChheEEeecCC--------CHHHHH----HHHHHHHHhcC-CCCEEEEECCCCcCHHHHHHHHHH
Confidence 67889999999999999999986421 233333 45677777532 378999995 455444332
Q ss_pred H-H-cCCCEEecCCCCCCCchHHHHHHhcCCCEEE
Q 038230 306 V-G-KGAHIVNDVSAGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 306 L-~-~G~~iINdVsg~~~d~~m~~l~~~~~~~vVl 338 (480)
| + +|. +|-+-.. ..+.+..+.+..++|++.
T Consensus 213 l~~~~~i-~iE~P~~--~~~~~~~l~~~~~iPI~~ 244 (371)
T 2ps2_A 213 LPHGLDF-ALEAPCA--TWRECISLRRKTDIPIIY 244 (371)
T ss_dssp SCTTCCC-EEECCBS--SHHHHHHHHTTCCSCEEE
T ss_pred HHhhcCC-cCcCCcC--CHHHHHHHHhhCCCCEEe
Confidence 2 2 377 7765332 125566666677888876
No 491
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=47.97 E-value=30 Score=36.97 Aligned_cols=68 Identities=13% Similarity=0.197 Sum_probs=47.9
Q ss_pred HHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHhcccCCCcEEEeeccccccccccCCCCcCcccHHHHHHHHHH
Q 038230 367 LYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLGLAASHAPILIGPSRKRFLGEICNRPSADERDPATIASITAG 446 (480)
Q Consensus 367 l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~l~~~g~Pil~G~SrKsfi~~v~g~~~~~~r~~~t~a~~~~a 446 (480)
-.++++.+.++|++ =|++|--.|..+...+.++.++. .++++|++.| |+ +|...+..+
T Consensus 282 ~~eR~~aLv~AGvD--~iviD~ahGhs~~v~~~i~~ik~-~~p~~~viaG--------NV-----------aT~e~a~~L 339 (556)
T 4af0_A 282 DKDRLKLLAEAGLD--VVVLDSSQGNSVYQIEFIKWIKQ-TYPKIDVIAG--------NV-----------VTREQAAQL 339 (556)
T ss_dssp HHHHHHHHHHTTCC--EEEECCSCCCSHHHHHHHHHHHH-HCTTSEEEEE--------EE-----------CSHHHHHHH
T ss_pred HHHHHHHHHhcCCc--EEEEeccccccHHHHHHHHHHHh-hCCcceEEec--------cc-----------cCHHHHHHH
Confidence 45788889999997 79999988887665444444443 4678999887 33 122334457
Q ss_pred HHcCCcEEEc
Q 038230 447 VLGGANIVRV 456 (480)
Q Consensus 447 ~~~Ga~IlRv 456 (480)
+..|||.++|
T Consensus 340 i~aGAD~vkV 349 (556)
T 4af0_A 340 IAAGADGLRI 349 (556)
T ss_dssp HHHTCSEEEE
T ss_pred HHcCCCEEee
Confidence 7899999986
No 492
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=47.96 E-value=36 Score=33.98 Aligned_cols=90 Identities=13% Similarity=-0.004 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC--C-HHHHHHHHH
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF--Y-SKVASEAVG 307 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~--~-~~v~~aaL~ 307 (480)
.+.+++++.++.+.+.|.++|.=-. .| +.++. .+.|++. .++||+.|=. . ++.++.+++
T Consensus 211 ~~~~~a~~~~~~l~~~~i~~iE~P~---~~--------~~~~~----~~~l~~~---~~iPIa~dE~~~~~~~~~~~~i~ 272 (382)
T 1rvk_A 211 YSRTDALALGRGLEKLGFDWIEEPM---DE--------QSLSS----YKWLSDN---LDIPVVGPESAAGKHWHRAEWIK 272 (382)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEECCS---CT--------TCHHH----HHHHHHH---CSSCEEECSSCSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEeCCC---Ch--------hhHHH----HHHHHhh---CCCCEEEeCCccCcHHHHHHHHH
Confidence 4789999999999889999997321 11 11222 2333443 3789999754 5 889999999
Q ss_pred cC-CCEEec-CC---CCCCCchHHHHHHhcCCCEEE
Q 038230 308 KG-AHIVND-VS---AGQLDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ~G-~~iINd-Vs---g~~~d~~m~~l~~~~~~~vVl 338 (480)
.| +++||= ++ |.+.--+++.+|+.+|.++++
T Consensus 273 ~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 308 (382)
T 1rvk_A 273 AGACDILRTGVNDVGGITPALKTMHLAEAFGMECEV 308 (382)
T ss_dssp TTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEee
Confidence 85 788872 21 211114688999999999887
No 493
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=47.92 E-value=1.7e+02 Score=27.05 Aligned_cols=96 Identities=13% Similarity=0.065 Sum_probs=61.8
Q ss_pred CCeEEEeCCC------HHHHHHHHHcCCCEEecCCCCCCC---chHHHHHHhcCCCEEEEcCCCCCCccccccccchhhH
Q 038230 289 GKLVSVDTFY------SKVASEAVGKGAHIVNDVSAGQLD---PDMYKVVAGLKVPYVAMHMRGDPSTMQNEENLQYDDV 359 (480)
Q Consensus 289 ~~pISIDT~~------~~v~~aaL~~G~~iINdVsg~~~d---~~m~~l~~~~~~~vVlmh~~g~p~~~~~~~~~~~~~v 359 (480)
...|++-|+. .+.++.+-+.|.+-|- +...... +++.++++++|..+..+|.. .+..... ..++.
T Consensus 25 ~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vE-l~~~~~~~~~~~~~~~l~~~gl~v~~~~~~-~~~~l~~----~d~~~ 98 (287)
T 3kws_A 25 ELKLSFQEGIAPGESLNEKLDFMEKLGVVGFE-PGGGGLAGRVNEIKQALNGRNIKVSAICAG-FKGFILS----TDPAI 98 (287)
T ss_dssp CCEEEEETTSSCCSSHHHHHHHHHHTTCCEEE-CBSTTCGGGHHHHHHHHTTSSCEECEEECC-CCSCTTB----SSHHH
T ss_pred eeeEEEEecccCCCCHHHHHHHHHHcCCCEEE-ecCCchHHHHHHHHHHHHHcCCeEEEEecC-CCCcCCC----CCHHH
Confidence 4567776542 3566777777888765 3322111 56788888999998876642 1111100 01344
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCC
Q 038230 360 CKQVASELYSKVRDAELSGIPAWRIIIDPGLGF 392 (480)
Q Consensus 360 ~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf 392 (480)
.++..+.+.+.++.|...|.+ .|++=||.+.
T Consensus 99 r~~~~~~~~~~i~~a~~lGa~--~v~~~~g~~~ 129 (287)
T 3kws_A 99 RKECMDTMKEIIAAAGELGST--GVIIVPAFNG 129 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTCS--EEEECSCCTT
T ss_pred HHHHHHHHHHHHHHHHHcCCC--EEEEecCcCC
Confidence 556678889999999999998 7888787653
No 494
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=47.72 E-value=73 Score=30.39 Aligned_cols=81 Identities=11% Similarity=-0.013 Sum_probs=51.0
Q ss_pred chHHHHHHhcCCCEEEEcCCCCCCc-c---ccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCC-ccChh
Q 038230 323 PDMYKVVAGLKVPYVAMHMRGDPST-M---QNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGF-SKKAE 397 (480)
Q Consensus 323 ~~m~~l~~~~~~~vVlmh~~g~p~~-~---~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf-~k~~~ 397 (480)
.+.+++|++.|+++|++|....+.. . ...+....++..+...+.+.+..+.|.++|+ +|.+-|.-+. ..+..
T Consensus 114 ~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv---~l~lEn~~~~~~~~~~ 190 (340)
T 2zds_A 114 KDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGV---RFAHEVHPSEIAYDYW 190 (340)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTC---EEEEECCTTSSCCSHH
T ss_pred HHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCC---EEEEEcCCCcccCCHH
Confidence 4679999999999999986322100 0 0000001234455667788888899999999 5999985443 34555
Q ss_pred HHHHHHHhc
Q 038230 398 HNLDILLGL 406 (480)
Q Consensus 398 ~~~~~lr~l 406 (480)
+..++++.+
T Consensus 191 ~~~~ll~~v 199 (340)
T 2zds_A 191 TTHRALEAV 199 (340)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 556666654
No 495
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=47.65 E-value=47 Score=33.68 Aligned_cols=90 Identities=12% Similarity=0.088 Sum_probs=61.5
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHH
Q 038230 230 FQSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVG 307 (480)
Q Consensus 230 ~~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~ 307 (480)
-.+.++|++.++++.+.|.++|+= ...|. .-+.+ +.|++. +++||+.|= ++++.++.+++
T Consensus 218 ~~~~~~A~~~~~~l~~~~i~~iEe---P~~~~-----~~~~~-------~~l~~~---~~iPIa~dE~~~~~~~~~~~i~ 279 (404)
T 4e5t_A 218 QFTVSGAKRLARRLEAYDPLWFEE---PIPPE-----KPEDM-------AEVARY---TSIPVATGERLCTKYEFSRVLE 279 (404)
T ss_dssp CBCHHHHHHHHHHHGGGCCSEEEC---CSCTT-----CHHHH-------HHHHHH---CSSCEEECTTCCHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHhhcCCcEEEC---CCCcc-----cHHHH-------HHHHhh---CCCCEEeCCCcCCHHHHHHHHH
Confidence 358899999999999999999982 22221 11223 334444 479999984 45778888888
Q ss_pred cC-CCEEecCCCCC-----CCchHHHHHHhcCCCEEE
Q 038230 308 KG-AHIVNDVSAGQ-----LDPDMYKVVAGLKVPYVA 338 (480)
Q Consensus 308 ~G-~~iINdVsg~~-----~d~~m~~l~~~~~~~vVl 338 (480)
.| +++|| +.-.. .-.+++.+|..+|.+++.
T Consensus 280 ~~a~d~v~-~d~~~~GGit~~~~ia~~A~~~gi~~~~ 315 (404)
T 4e5t_A 280 TGAASILQ-MNLGRVGGLLEAKKIAAMAECHSAQIAP 315 (404)
T ss_dssp HTCCSEEC-CCTTTSSCHHHHHHHHHHHHHTTCEECC
T ss_pred hCCCCEEe-cCccccCCHHHHHHHHHHHHHcCCEEee
Confidence 75 78887 32211 014689999999999754
No 496
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=47.28 E-value=24 Score=35.61 Aligned_cols=90 Identities=6% Similarity=-0.071 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeCC--CHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDTF--YSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT~--~~~v~~aaL~~ 308 (480)
.+.+++++.++.+.+.|.++|+= | +++ +.++- .+.|++. .++||+.|=. +++.++.+++.
T Consensus 221 ~~~~~a~~~~~~l~~~~i~~iEq------P----~~~-~d~~~----~~~l~~~---~~iPIa~dE~~~~~~~~~~~i~~ 282 (392)
T 1tzz_A 221 FNLETGIAYAKMLRDYPLFWYEE------V----GDP-LDYAL----QAALAEF---YPGPMATGENLFSHQDARNLLRY 282 (392)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEC------C----SCT-TCHHH----HHHHTTT---CCSCEEECTTCCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeecC------C----CCh-hhHHH----HHHHHhh---CCCCEEECCCCCCHHHHHHHHHc
Confidence 57899999999998899999972 2 221 12222 3445555 4799999754 78999999998
Q ss_pred C-----CCEEec-CC---CCCCCchHHHHHHhcCCC---EEE
Q 038230 309 G-----AHIVND-VS---AGQLDPDMYKVVAGLKVP---YVA 338 (480)
Q Consensus 309 G-----~~iINd-Vs---g~~~d~~m~~l~~~~~~~---vVl 338 (480)
| +++||= ++ |.+.--+++.+|+++|.+ +++
T Consensus 283 ~~~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 324 (392)
T 1tzz_A 283 GGMRPDRDWLQFDCALSYGLCEYQRTLEVLKTHGWSPSRCIP 324 (392)
T ss_dssp SCCCTTTCEECCCTTTTTCHHHHHHHHHHHHHTTCCGGGBCC
T ss_pred CCCccCCcEEEECccccCCHHHHHHHHHHHHHCCCCCceEee
Confidence 7 888872 22 111114788999999999 654
No 497
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=46.99 E-value=20 Score=35.87 Aligned_cols=93 Identities=12% Similarity=0.145 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEeC--CCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVDT--FYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISIDT--~~~~v~~aaL~~ 308 (480)
.+.++|++.++.+.+.|.++|+ | | +.+ ++++. ...|++. +++||+.|= +++.-++.+++.
T Consensus 199 ~~~~~a~~~~~~l~~~~i~~iE---q---P----~~~-~~~~~----~~~l~~~---~~iPia~dE~~~~~~~~~~~~~~ 260 (370)
T 1chr_A 199 WDEQVASVYIPELEALGVELIE---Q---P----VGR-ENTQA----LRRLSDN---NRVAIMADESLSTLASAFDLARD 260 (370)
T ss_dssp CCTTHHHHHTHHHHTTTEEEEE---C---C----SCT-TCHHH----HHHHHHH---SCSEEEESSSCCSHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcCCCEEE---C---C----CCc-ccHHH----HHHHHhh---CCCCEEeCCCcCCHHHHHHHHHc
Confidence 4678899999999888999987 2 2 221 11222 2334443 479999984 578888899987
Q ss_pred C-CCEEe-cCC--CC-CCCchHHHHHHhcCCCEEEEcC
Q 038230 309 G-AHIVN-DVS--AG-QLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 309 G-~~iIN-dVs--g~-~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
| +++|| |++ |+ +.--+++.+|..+|.++++-++
T Consensus 261 ~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~~ 298 (370)
T 1chr_A 261 RSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTM 298 (370)
T ss_dssp TSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECCS
T ss_pred CCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecCC
Confidence 4 88887 222 11 1114688899999999886444
No 498
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=46.89 E-value=43 Score=32.29 Aligned_cols=92 Identities=17% Similarity=0.194 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHcCCcCCCCeEEEeCCCHH----HHHHHHHcCCCEEecCCCCCCCchHHHHHHhcCCCEEEEcCCCCCCc
Q 038230 272 ERLIPVLEAVLTMPEMEGKLVSVDTFYSK----VASEAVGKGAHIVNDVSAGQLDPDMYKVVAGLKVPYVAMHMRGDPST 347 (480)
Q Consensus 272 ~rl~~vi~~l~~~~~~~~~pISIDT~~~~----v~~aaL~~G~~iINdVsg~~~d~~m~~l~~~~~~~vVlmh~~g~p~~ 347 (480)
+.+...++.+++. -|+.-.-+|.= ++-..|..|+.=|-.-. .+|+.++++..++-+| +-|++..
T Consensus 2 ~~i~~~l~~vr~~-----~PLvh~iTN~V~~n~~AN~lLA~GasPiMa~~----~~E~~e~~~~a~al~i---NiGtl~~ 69 (265)
T 3hpd_A 2 KFIIEALKRVRER-----RPLVHNITNFVVMNTTANALLALGASPVMAHA----EEELEEMIRLADAVVI---NIGTLDS 69 (265)
T ss_dssp HHHHHHHHHHHHH-----CCEEEEECCTTTHHHHHHHHHHHTCEEEECCC----TTTHHHHHHHCSEEEE---ECTTCCH
T ss_pred hHHHHHHHHHHhc-----CCcEEeccchhhHHHHHHHHHHhCCchhhcCC----HHHHHHHHHHCCeEEE---ECCCCCh
Confidence 4556677788865 34444444433 34444556887665332 3577788887775333 2244421
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEec-CCCC
Q 038230 348 MQNEENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDP-GLGF 392 (480)
Q Consensus 348 ~~~~~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDP-giGf 392 (480)
+..+.+....+.+.+.|++ ++||| |.|-
T Consensus 70 --------------~~~~~m~~A~~~A~~~~~P---vVLDPVg~ga 98 (265)
T 3hpd_A 70 --------------GWRRSMVKATEIANELGKP---IVLDPVGAGA 98 (265)
T ss_dssp --------------HHHHHHHHHHHHHHHHTCC---EEEECTTBTT
T ss_pred --------------HHHHHHHHHHHHHHHcCCC---EEEcCCCCCC
Confidence 1224455677888999998 99999 5553
No 499
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=46.85 E-value=2.9e+02 Score=29.35 Aligned_cols=165 Identities=13% Similarity=0.074 Sum_probs=90.3
Q ss_pred EEEEEEecCCCCCCCCCccCCHHHHHH----HHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcC
Q 038230 212 SVMGILNLTPDSFSDGGKFQSVEAAVS----QVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEM 287 (480)
Q Consensus 212 ~imGIlN~tpDSFsdgg~~~~~e~a~~----~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~ 287 (480)
.|-|-+-=+.+.. ++-...+.+++.+ +++.+++.|+|+|=+-. -|. -+|.+-....+ ++.+
T Consensus 101 ~VAGsiGP~g~~~-~~~~~~~~~e~~~~~~~qi~~l~~~gvD~l~~ET---~~~------~~Ea~aa~~a~---~~~~-- 165 (566)
T 1q7z_A 101 LVFGDIGPTGELP-YPLGSTLFEEFYENFRETVEIMVEEGVDGIIFET---FSD------ILELKAAVLAA---REVS-- 165 (566)
T ss_dssp EEEEEECCCSCCB-TTTSSBCHHHHHHHHHHHHHHHHHTTCSEEEEEE---ECC------HHHHHHHHHHH---HHHC--
T ss_pred eEEEeCCCcccCC-CCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEec---cCC------HHHHHHHHHHH---HHhC--
Confidence 6777776666543 3323457777765 45555699999998863 332 35565554444 4321
Q ss_pred CCCe--EEE---------eCCCHHHHHHHHHc-CCCEEecCCCCCCCchHHHHHHh----cCCCEEEEcCCCCCCccccc
Q 038230 288 EGKL--VSV---------DTFYSKVASEAVGK-GAHIVNDVSAGQLDPDMYKVVAG----LKVPYVAMHMRGDPSTMQNE 351 (480)
Q Consensus 288 ~~~p--ISI---------DT~~~~v~~aaL~~-G~~iINdVsg~~~d~~m~~l~~~----~~~~vVlmh~~g~p~~~~~~ 351 (480)
+++| +|. |-...+.+-..++. |++.|- ++....-+.|.+++++ .+.++++.++-|.|...+..
T Consensus 166 ~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~~~~~avG-~NC~~gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~ 244 (566)
T 1q7z_A 166 RDVFLIAHMTFDEKGRSLTGTDPANFAITFDELDIDALG-INCSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGK 244 (566)
T ss_dssp SSSCEEEEECCCTTSCCTTSCCHHHHHHHHHTSSCSEEE-EESSSCHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTE
T ss_pred CCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhccCCCEEE-EeCCCCHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCc
Confidence 1444 443 22345555555553 766543 4443322345555443 47899999998888411111
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHCCCCCCCEEEecCCCCccChhHHHHHHHh
Q 038230 352 ENLQYDDVCKQVASELYSKVRDAELSGIPAWRIIIDPGLGFSKKAEHNLDILLG 405 (480)
Q Consensus 352 ~~~~~~~v~~ev~~~l~~~i~~a~~~Gi~~~~IilDPgiGf~k~~~~~~~~lr~ 405 (480)
. .|+.-. +.|.+.+..+.+.|+ +|| |-=-+.+++| ++.|++
T Consensus 245 ~--~~~~~p----~~~a~~~~~~~~~G~---~ii---GGCCGTtP~h-I~aia~ 285 (566)
T 1q7z_A 245 T--VYPLKP----HDFAVHIDSYYELGV---NIF---GGCCGTTPEH-VKLFRK 285 (566)
T ss_dssp E--ECCCCH----HHHHTTHHHHHHTTC---SEE---CCCTTCCHHH-HHHHHH
T ss_pred c--ccCCCH----HHHHHHHHHHHHcCC---cEE---ccccCCCHHH-HHHHHH
Confidence 1 122111 345667777788997 454 3224667666 444433
No 500
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=46.75 E-value=22 Score=35.88 Aligned_cols=93 Identities=16% Similarity=0.179 Sum_probs=62.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCcCCCCeEEEe--CCCHHHHHHHHHc
Q 038230 231 QSVEAAVSQVRLMISEGADMIDIGAQSTRPMATKISAEKELERLIPVLEAVLTMPEMEGKLVSVD--TFYSKVASEAVGK 308 (480)
Q Consensus 231 ~~~e~a~~~A~~~v~~GAdiIDIG~eStrP~a~~v~~~eE~~rl~~vi~~l~~~~~~~~~pISID--T~~~~v~~aaL~~ 308 (480)
.+.++|++.++++.+.|.++|+ | | +.+ +.++. ...|++. +++||+.| -+++.-++.+++.
T Consensus 203 ~~~~~A~~~~~~L~~~~i~~iE---q---P----~~~-~d~~~----~~~l~~~---~~iPIa~dE~~~~~~~~~~~~~~ 264 (385)
T 3i6e_A 203 LEIDEAVPRVLDVAQFQPDFIE---Q---P----VRA-HHFEL----MARLRGL---TDVPLLADESVYGPEDMVRAAHE 264 (385)
T ss_dssp CCGGGHHHHHHHHHTTCCSCEE---C---C----SCT-TCHHH----HHHHHTT---CSSCEEESTTCCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEE---C---C----CCc-ccHHH----HHHHHHh---CCCCEEEeCCcCCHHHHHHHHHc
Confidence 4678899999999888999987 2 2 222 11222 3445655 48999998 3567788888887
Q ss_pred C-CCEEe-cCC--C-CCCCchHHHHHHhcCCCEEEEcC
Q 038230 309 G-AHIVN-DVS--A-GQLDPDMYKVVAGLKVPYVAMHM 341 (480)
Q Consensus 309 G-~~iIN-dVs--g-~~~d~~m~~l~~~~~~~vVlmh~ 341 (480)
| +++|| |++ | .+.--+++.+|+.+|.+++.-++
T Consensus 265 ~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 302 (385)
T 3i6e_A 265 GICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGDM 302 (385)
T ss_dssp TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 4 78887 111 2 12124688999999999976333
Done!