BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038232
(217 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225439709|ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 136/230 (59%), Gaps = 28/230 (12%)
Query: 8 KIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGD-------IEPAKIEKVDKRTSEECQE 60
KIQ ASDL+ W+ + +++ R+++ G G E K+E K + ++
Sbjct: 70 KIQSLASDLLEMWKKVVIDETRNKKNGGLDNNGSAKAEVSKTETVKVEMAHKAGGVKVEK 129
Query: 61 ISGVGIVKVQKVDQNATSLSSNVVRPESVVTEK--------------------TNSSDNL 100
S V VK++K D+ +++ +V R E++ EK +N L
Sbjct: 130 ASKVETVKIEKFDRGSSTKPGSVSRSETIKVEKRVENVDERKQFSSVKKPPQASNGPPKL 189
Query: 101 SRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDR 160
+ +MI+CND R+ VRE + +AL KV+ EADE+I+DEVNACD +RVA+++ES MFEK R
Sbjct: 190 T-AMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPIRVAVSVESVMFEKMGR 248
Query: 161 YDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
+G K KY++++ N+KDP NPD RR V LG+VKP+ ++ M+ +EMA ++
Sbjct: 249 SNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQ 298
>gi|224087871|ref|XP_002308256.1| predicted protein [Populus trichocarpa]
gi|222854232|gb|EEE91779.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 140/220 (63%), Gaps = 19/220 (8%)
Query: 6 RKKIQDFASDLIVSWRNMSLEQMRDERKGSY----TIPGDI---EPAKIEKVDKRTSEEC 58
++KI+ ASDL+ W+ M +++ R ++ GS ++ ++ E K+EK+ K + +
Sbjct: 68 KEKIRAVASDLLEMWKKMVIDETR-KKNGSIDSKSSVKAEVSKSETVKVEKLRKTSVVKV 126
Query: 59 QEISGVGIVKVQKVDQNAT----SLSSNVVRPESVVTEKTNSSDNLS----RSMIRCNDC 110
+ S VKV+K+DQ+ T +S ++ SV K S + +++++CND
Sbjct: 127 ERASTSETVKVEKMDQDKTVKVEKMSKQEIQTSSV---KQPSQSPIGPPKLKTLVKCNDA 183
Query: 111 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
R+ +RE + +ALSKV+ EADE+IRDEV ACD +RVA+++ES MFEK R +G K+KY+
Sbjct: 184 LRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAVSVESMMFEKLGRSNGAQKLKYR 243
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
+++ N+KD NPDFRR V LG+V+PE +V M +EMA ++
Sbjct: 244 SIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGPEEMASEQ 283
>gi|449441244|ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 131/239 (54%), Gaps = 39/239 (16%)
Query: 6 RKKIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGD--------IEPAKIEKVDKRTSEE 57
+KKIQ+ ASDLI W+ + +++ +K D E K+EK K +S +
Sbjct: 67 KKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQKSSSMK 126
Query: 58 CQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTE-------KTNSSDNLSR-------- 102
+ +S KV++ D+N + S + ESVV+E KT+S + R
Sbjct: 127 VERVS-----KVEQFDRNGATSSVKYSKSESVVSERNSVKVEKTDSMVKVERVVKEEKKP 181
Query: 103 -----------SMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALE 151
SMI+ D R+ +RE + +A SKV GEADEE DEVNA D +RVA+++E
Sbjct: 182 SSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSVE 241
Query: 152 SAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
S MFE W G K KY++++ NLKDPKNPDFRR V LG +KPE ++ M+ +MA D+
Sbjct: 242 SVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQ 300
>gi|297735532|emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 128/206 (62%), Gaps = 25/206 (12%)
Query: 8 KIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEP---AKIEKVDKRTSEECQEISGV 64
KIQ ASDL+ W+ + +++ R+++ G G + +K+E V+KR
Sbjct: 70 KIQSLASDLLEMWKKVVIDETRNKKNGGLDNNGSAKAEKASKVETVEKR----------- 118
Query: 65 GIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALS 124
V+ VD+ S+V +P + +N L+ +MI+CND R+ VRE + +AL
Sbjct: 119 ----VENVDERKQF--SSVKKP----PQASNGPPKLT-AMIKCNDALRDKVRELLAEALF 167
Query: 125 KVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDF 184
KV+ EADE+I+DEVNACD +RVA+++ES MFEK R +G K KY++++ N+KDP NPD
Sbjct: 168 KVASEADEDIKDEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDL 227
Query: 185 RRNVHLGQVKPETIVGMTAKEMAGDK 210
RR V LG+VKP+ ++ M+ +EMA ++
Sbjct: 228 RRKVLLGEVKPDRLINMSPEEMASNQ 253
>gi|224139382|ref|XP_002323085.1| predicted protein [Populus trichocarpa]
gi|222867715|gb|EEF04846.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 131/208 (62%), Gaps = 17/208 (8%)
Query: 8 KIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISGVGIV 67
KI+ ASDL+ +W+ + +++ RK + T+ K+EK+ K + ++S V
Sbjct: 70 KIRAVASDLLETWKKIVIDETM--RKKNATV-------KVEKLQKTSM---VKVSTSETV 117
Query: 68 KVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLS-----RSMIRCNDCFREVVREKVCDA 122
KV+K+DQ+ T + + E + S + +++++CND R+ +RE + +A
Sbjct: 118 KVEKMDQDKTVKVAQTCKEEIQTSSVKKPSQAPTGPPKLKTLVKCNDALRDKIRELLAEA 177
Query: 123 LSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNP 182
LSKV+ EADE+IRDEV ACD +RVA+++ESAMFEK R +G K+KY++++ N+KD NP
Sbjct: 178 LSKVASEADEDIRDEVEACDPIRVAVSVESAMFEKLGRSNGAQKMKYRSIMFNIKDQNNP 237
Query: 183 DFRRNVHLGQVKPETIVGMTAKEMAGDK 210
D RR V LGQV+P+ +V M +EMA ++
Sbjct: 238 DLRRKVLLGQVQPQRLVTMPPEEMASEQ 265
>gi|255575598|ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 342
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 135/210 (64%), Gaps = 13/210 (6%)
Query: 6 RKKIQDFASDLIVSWRNMSLEQMRDERKGSY----TIPGDI---EPAKIEKVDKRTSEEC 58
R+KIQ ASDL+ W+ + +++ ++ G+ ++ ++ E K+EKV K ++ +
Sbjct: 68 REKIQTVASDLLEMWKKIVIDETTRKKNGTVDNKSSVKAEVSKVETIKVEKVQKASTVKV 127
Query: 59 QEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREK 118
++I VKV+K + + +V +P ++ + + L+ ++++CND R+ +RE
Sbjct: 128 EKIDRERTVKVEKKSEEKQQ-AIDVKKP----SQASVTPPKLT-AIVKCNDALRDKIREL 181
Query: 119 VCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKD 178
+ +ALSKV EA+E+ RDE++ CD +RVA+++ESAMFEK R +G K KY++++ NLKD
Sbjct: 182 LVEALSKVVSEANEDGRDEISKCDPIRVAVSVESAMFEKMGRSNGAQKFKYRSIMFNLKD 241
Query: 179 PKNPDFRRNVHLGQVKPETIVGMTAKEMAG 208
P NPD RR V LG+VKPE ++ MT +EMA
Sbjct: 242 PNNPDLRRKVLLGEVKPERLISMTPEEMAS 271
>gi|255559741|ref|XP_002520890.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223540021|gb|EEF41599.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 330
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 124/206 (60%), Gaps = 17/206 (8%)
Query: 5 SRKKIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISGV 64
SRK IQD ASD+ W+ LEQ +K G +E +K +++E + I
Sbjct: 71 SRKNIQDLASDVFPLWKKKFLEQTSSTKKN-----GMLE----DKTSVKSTENIK-IEKT 120
Query: 65 GIVKVQ-KVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDAL 123
+KV+ K + S+ VV E ++ +S+ +CND R+ +RE++ +AL
Sbjct: 121 RTIKVEAKTEHKGEPRSAKVVESECLL------RSPRMKSIPKCNDPSRDNIREQLYEAL 174
Query: 124 SKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPD 183
KVS EA+EEI+ EVNACD++ VA+A+ESA+F W +G +IKY++++ N +D KNPD
Sbjct: 175 CKVSSEANEEIQKEVNACDAIGVAVAVESALFSNWGPSNGSDRIKYRSLIFNTRDAKNPD 234
Query: 184 FRRNVHLGQVKPETIVGMTAKEMAGD 209
FRR V LGQVKPE I ++++EMA D
Sbjct: 235 FRRKVLLGQVKPERIAELSSEEMASD 260
>gi|388514187|gb|AFK45155.1| unknown [Medicago truncatula]
Length = 369
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 135/234 (57%), Gaps = 32/234 (13%)
Query: 6 RKKIQDFASDLIVSWRNMSLEQMRDERKG---SYTIPGDIEPAKIEKVDKRTSEECQEIS 62
R+ I+ FA DLI W+++ +++ + G S + E AK K+ K S + ++
Sbjct: 70 RENIRTFAVDLIAIWKDVIIKETSKNKNGASDSKVESTNGERAKAGKLQKSPSVKVEKGE 129
Query: 63 GVGIVKVQKVDQNATS-LSSNVVRPESV--VTEKTNSSDNLS------------------ 101
KV+KV+ N +S LSS VR ++V EKT+ + N+
Sbjct: 130 SA---KVEKVNGNGSSKLSSGNVRAQNVDVKIEKTDRTSNIKAKEEKPVSAAKKISSSAA 186
Query: 102 -----RSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 156
++MI+ ND R+ +RE + DAL+KV EADE++ DEVNACD +RVA+ +ES +FE
Sbjct: 187 APPKLKTMIKSNDSARDKIRELLRDALAKVFEEADEDMMDEVNACDPIRVAVTVESVLFE 246
Query: 157 KWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
W +G K+KY++++ NLKD KNPDFRR V LG V+P+ + M++ EMA ++
Sbjct: 247 NWGPSNGAQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRLAVMSSAEMASEQ 300
>gi|449499153|ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
[Cucumis sativus]
Length = 290
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 111/194 (57%), Gaps = 31/194 (15%)
Query: 43 EPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTE-------KTN 95
E K+EK K +S + + +S KV++ D+N + S + ESVV+E KT+
Sbjct: 33 ESVKVEKFQKSSSMKVERVS-----KVEQFDRNGATSSVKYSKSESVVSERNSVKVEKTD 87
Query: 96 SSDNLSR-------------------SMIRCNDCFREVVREKVCDALSKVSGEADEEIRD 136
S + R SMI+ D R+ +RE + +A SKV GEADEE D
Sbjct: 88 SMVKVERVVKEEKKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMD 147
Query: 137 EVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPE 196
EVNA D +RVA+++ES MFE W G K KY++++ NLKDPKNPDFRR V LG +KPE
Sbjct: 148 EVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPE 207
Query: 197 TIVGMTAKEMAGDK 210
++ M+ +MA D+
Sbjct: 208 RMINMSTADMASDQ 221
>gi|356509090|ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
[Glycine max]
Length = 368
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 138/245 (56%), Gaps = 36/245 (14%)
Query: 6 RKKIQDFASDLIVSWRNMSLEQMRDERKG---SYTIPGDIEPAKIEKVDKRTSEECQEIS 62
R KI+ FA DLI W+ + +++ + G S + E +K K+ K S + ++
Sbjct: 65 RLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDSKVESANGEKSKAGKMQKSPSVKVEKGE 124
Query: 63 GVGIVKVQKVDQNATSLSS--NVVRPES-VVTEKTNSSDNLS------------------ 101
VKV+K+D+N T+ SS N+ + ++ V EKT+ S ++
Sbjct: 125 ---TVKVEKIDRNGTTKSSSENMKKVQNDVKNEKTDRSASVKVEKIAKEEKPVSGAKKMS 181
Query: 102 ---------RSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 152
++MI+ ND R+ +RE + +ALSKV+GEADE++ D VN D +RVA+ +ES
Sbjct: 182 SSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSDPIRVAVTVES 241
Query: 153 AMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKML 212
+FEKW +G K+KY++++ NLKD NPDFRR V LG ++PE ++ M+ EMA ++
Sbjct: 242 VLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEMASEQRK 301
Query: 213 SCYQR 217
YQ+
Sbjct: 302 QEYQK 306
>gi|255637690|gb|ACU19168.1| unknown [Glycine max]
Length = 368
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 138/245 (56%), Gaps = 36/245 (14%)
Query: 6 RKKIQDFASDLIVSWRNMSLEQMRDERKG---SYTIPGDIEPAKIEKVDKRTSEECQEIS 62
R KI+ FA DLI W+ + +++ + G S + E +K K+ K S + ++
Sbjct: 65 RLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDSKVESANGEKSKAGKMQKSPSVKVEKGE 124
Query: 63 GVGIVKVQKVDQNATSLSS--NVVRPES-VVTEKTNSSDNLS------------------ 101
VKV+K+D+N T+ SS N+ + ++ V EKT+ S ++
Sbjct: 125 ---TVKVEKIDRNGTTKSSSENMKKVQNDVKNEKTDRSASVKVEKIAKEEKPVSGAKKMS 181
Query: 102 ---------RSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 152
++MI+ ND R+ +RE + +ALSKV+GEADE++ D VN D +RVA+ +ES
Sbjct: 182 SSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSDPIRVAVTVES 241
Query: 153 AMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKML 212
+FEKW +G K+KY++++ NLKD NPDFRR V LG ++PE ++ M+ EMA ++
Sbjct: 242 VLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEMASEQRK 301
Query: 213 SCYQR 217
YQ+
Sbjct: 302 QEYQK 306
>gi|356516223|ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like
[Glycine max]
Length = 367
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 133/244 (54%), Gaps = 35/244 (14%)
Query: 6 RKKIQDFASDLIVSWRNMSLEQMRDERKG---SYTIPGDIEPAKIEKVDKRTSEECQEIS 62
R+KI+ FA DLI W+ + +++ + G S + E +K K+ K S +I
Sbjct: 65 RQKIKSFAIDLIEIWKGIIIKETSKNKNGGSDSKDESANREKSKAGKMQKSPS---VKIE 121
Query: 63 GVGIVKVQKVDQNATSLSS--------NVVRPE------SVVTEKTNSSDNLS------- 101
VKV+K+++N TS SS N V+ E SV EK +S
Sbjct: 122 KGETVKVEKIERNGTSKSSFENMKKVQNDVKNERTDRAASVKMEKIAEEKPISGAKKMSS 181
Query: 102 --------RSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESA 153
++MI+ ND R+ +RE + +ALSKV+ EADE++ VN D +RVA+ +ES
Sbjct: 182 SSTAPPKLKTMIKSNDATRDKIREILHEALSKVTREADEDLVAVVNDSDPIRVAVTVESV 241
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLS 213
+FEKW +G K+KY++++ NLKD NPDFRR V LG V+PE ++ M+ EMA ++
Sbjct: 242 LFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMASEQRKQ 301
Query: 214 CYQR 217
YQ+
Sbjct: 302 EYQK 305
>gi|116789178|gb|ABK25146.1| unknown [Picea sitchensis]
Length = 331
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 120/209 (57%), Gaps = 24/209 (11%)
Query: 6 RKKIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPA-KIE-KVDKRTSEECQEISG 63
R+KI+ A++L+ +W+ + S T+P + A K+E K K E G
Sbjct: 72 REKIRTLAAELLDAWKKVVT---------SETLPDNGNKATKVEDKQFKSVKVEVNASKG 122
Query: 64 VGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLS---RSMIRCNDCFREVVREKVC 120
VKV+K + V ES+ ++K +SS N SMI+CND R+ RE +
Sbjct: 123 ES-VKVEKKPK---------VETESIGSKKASSSSNGPPKLTSMIKCNDALRDKFREILY 172
Query: 121 DALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPK 180
+A SKV EA+ E VNACD VR+A+++E+ MFEK R +G K KY++++ NLKD
Sbjct: 173 EAFSKVVNEAEGEDLARVNACDPVRIAVSVETVMFEKLGRSNGAQKFKYRSIMFNLKDGN 232
Query: 181 NPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
NPD RR V LGQ+KPE ++ MTA+EMA D
Sbjct: 233 NPDLRRRVLLGQIKPEKLIVMTAEEMASD 261
>gi|255641093|gb|ACU20825.1| unknown [Glycine max]
Length = 350
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 35/244 (14%)
Query: 6 RKKIQDFASDLIVSWRNMSLEQMRDERKG---SYTIPGDIEPAKIEKVDKRTSEECQEIS 62
R+KI+ FA DLI W+ + +++ + G S + E +K K+ K S +I
Sbjct: 65 RQKIKSFAIDLIEIWKGIIIKETGKNKNGGSDSKDESANREKSKAGKMQKSPS---VKIE 121
Query: 63 GVGIVKVQKVDQNATSLSS--------NVVRPE------SVVTEKTNSSDNLS------- 101
VKV+K+++N TS SS N V+ E SV EK +S
Sbjct: 122 KGETVKVEKIERNGTSKSSFENMKKVQNDVKNERTDRAASVKMEKIAEEKPISGAKKMSS 181
Query: 102 --------RSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESA 153
++MI+ +D R+ ++E + +ALSKV+ EADE++ VN D +RVA+ +ES
Sbjct: 182 SSTAPPKLKTMIKSSDATRDKIKEILHEALSKVTREADEDLVAVVNDSDPIRVAVTVESV 241
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLS 213
+FEKW +G K+KY++++ NLKD NPDFRR V LG V+PE ++ M+ EMA ++
Sbjct: 242 LFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMASEQRKQ 301
Query: 214 CYQR 217
YQ+
Sbjct: 302 EYQK 305
>gi|312283193|dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]
Length = 381
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 125/243 (51%), Gaps = 42/243 (17%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISGVGIVK 68
I+ A+DL+ W+ + +E+ +K T E AK K+D++ E + V + K
Sbjct: 71 IKSVATDLLEIWKKVVIEETSKAKKIGSTNGVKSETAKDGKIDRKDVERTSNPAPVKVQK 130
Query: 69 VQKVDQNATSLS--------------------------------SNVVRPESVVTEKTNS 96
+Q+ D +A S+ V+ E V E +S
Sbjct: 131 LQRGD-SAKSIKVEKKEPDNKVGAKIERKEQDNKVNTGAKLDHRGQTVKDEKVSKENQSS 189
Query: 97 SDNLSRS---------MIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVA 147
+ ++S M++CND R+ +RE + +ALS+V GE+DE R++VN CD RVA
Sbjct: 190 TKAPAKSPNAPPKLTSMLKCNDPVRDKIREMLVEALSRVHGESDEYDREKVNGCDPFRVA 249
Query: 148 IALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
+++ES MFEK R G K KY++++ NL+D NPD RR V G+V PE ++ ++A+EMA
Sbjct: 250 VSVESHMFEKLGRSTGAEKAKYRSIMFNLRDSNNPDLRRRVLTGEVPPEKLITLSAEEMA 309
Query: 208 GDK 210
DK
Sbjct: 310 SDK 312
>gi|224286619|gb|ACN41014.1| unknown [Picea sitchensis]
Length = 328
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Query: 90 VTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 149
V+ +N L+ SMI+CND R+ +RE + +A SKV EA+ E +NACD VRVA+
Sbjct: 140 VSSSSNGPPKLT-SMIKCNDAVRDKIREIIYEAFSKVVNEAEGENMVRINACDPVRVAVT 198
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E+ MFEK R +G K+KY++++ NLKD NPD RR V LG++KPE ++ MTA+EMA D
Sbjct: 199 VETLMFEKLGRSNGAQKLKYRSIIFNLKDANNPDLRRRVLLGEIKPEKLIVMTAEEMASD 258
Query: 210 K 210
+
Sbjct: 259 Q 259
>gi|383138603|gb|AFG50480.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138604|gb|AFG50481.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138605|gb|AFG50482.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138606|gb|AFG50483.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138607|gb|AFG50484.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138608|gb|AFG50485.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138609|gb|AFG50486.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138610|gb|AFG50487.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138611|gb|AFG50488.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138612|gb|AFG50489.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138613|gb|AFG50490.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138614|gb|AFG50491.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138615|gb|AFG50492.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138616|gb|AFG50493.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138617|gb|AFG50494.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138618|gb|AFG50495.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138619|gb|AFG50496.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 77/105 (73%)
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYD 162
SMI+CND R+ RE + +ALSKV+ EA+ E VNACD VR+A+++E+ MFEK R +
Sbjct: 33 SMIKCNDALRDKFREILYEALSKVASEAEGEDLARVNACDPVRIAVSVETVMFEKLGRSN 92
Query: 163 GPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
G K KY++++ NLKD NPD RR V LGQ+KPE ++ MTA+EMA
Sbjct: 93 GAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|361067733|gb|AEW08178.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 76/105 (72%)
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYD 162
SMI+CND R+ RE + +ALSKV EA+ E VNACD VR+A+++E+ MFEK R +
Sbjct: 33 SMIKCNDALRDKFREILYEALSKVVSEAEGEDLARVNACDPVRIAVSVETVMFEKLGRSN 92
Query: 163 GPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
G K KY++++ NLKD NPD RR V LGQ+KPE ++ MTA+EMA
Sbjct: 93 GAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|297823741|ref|XP_002879753.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297325592|gb|EFH56012.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 378
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 128/240 (53%), Gaps = 39/240 (16%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYT--------------IPGDIEPAKIEKVDKRT 54
I+ A+DL+ W+ + + + +K T P + P K++K+ +
Sbjct: 71 IKSVATDLLEIWKKVVIGETAKAKKTEGTNGCKEAKVNKMDVDKPSNPAPVKVQKLQRGD 130
Query: 55 SEECQEI-------SGVGIVKVQK--VDQNATSLSSNVVRPESVVTEKTNSSDNLSR--- 102
S + ++ GV VK+++ +D T+ + R ++V EK S DN S
Sbjct: 131 SAKSIKVERKEPDNKGVTGVKIERKELDNKVTNGTKIDYRGQAVKDEKV-SKDNQSSMKA 189
Query: 103 ------------SMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIAL 150
+M++CND R+ +RE + DAL +V+GEAD+ R VNA D +RVA+++
Sbjct: 190 PAKAPNAPPKLTAMLKCNDPVRDKIRELLVDALCRVAGEADDYERKSVNASDPLRVAVSV 249
Query: 151 ESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
ES MFEK R G K+KY++++ NL+D NPD RR V G++ PE ++ ++A+EMA DK
Sbjct: 250 ESLMFEKLGRSTGAQKLKYRSIMFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDK 309
>gi|357124260|ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
[Brachypodium distachyon]
Length = 364
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 118/227 (51%), Gaps = 26/227 (11%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISGVGI-- 66
IQ A+DL W+ + +E+ + S D A++EK E+ ++ V I
Sbjct: 68 IQAMATDLFGYWKKIVIEETGKKNGTSANEKLDNSAARLEKSQSMKVEKNSSLASVKIEK 127
Query: 67 -----------VKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSR------SMIRCND 109
VKV+K+ N + + +V + T T S ++ S++RCND
Sbjct: 128 NDLDIRVQKSDVKVEKIANNDSKVKVEMVSKDVSRTLDTKKSSSVPNGPPRLTSLVRCND 187
Query: 110 CFREVVREKVCDALSKVSGEAD----EEIR---DEVNACDSVRVAIALESAMFEKWDRYD 162
R+ RE + +A KVS E EE+R DEVNACD RV++ +ESA+FE+ R
Sbjct: 188 AARDKYRELLAEAFFKVSKETSKDDREEVRNLLDEVNACDPYRVSVTVESALFERLGRST 247
Query: 163 GPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
G +K KY+++L NLK NPDFRR V LG+V+P +V ++ EMA D
Sbjct: 248 GAHKAKYRSILFNLKADNNPDFRRRVLLGEVRPGRLVDISPDEMASD 294
>gi|115456173|ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|108711747|gb|ABF99542.1| transcription elongation factor S-II family protein, expressed
[Oryza sativa Japonica Group]
gi|113550158|dbj|BAF13601.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 125/232 (53%), Gaps = 33/232 (14%)
Query: 9 IQDFASDLIVSWRNMSLEQMR----DERKGSYTIPGDIEPAKIEKVDKRTSE-----ECQ 59
IQ A+DL+ W+ + +E+ + E GS E A+ KVDK ++ E +
Sbjct: 68 IQSMATDLLGYWKKVVIEEGKKNGTTENVGSTNSAARAEKAQPMKVDKSSASGSVKPEKR 127
Query: 60 EISGVG----IVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLS-----------RSM 104
E++ G +KV+K+ N + + V+ E E T + D S+
Sbjct: 128 EVNVRGQKPESIKVEKITNNDSK--NQQVKVERAPKEATRTPDTKKPSSVPNGPPKLTSL 185
Query: 105 IRCNDCFREVVREKVCDALSKVSGEAD----EEIR---DEVNACDSVRVAIALESAMFEK 157
++CND R+ +RE + DA S+V GE EE+R DEV+A D RVA+ +ESA+FE+
Sbjct: 186 VKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDARDPFRVAVTVESALFER 245
Query: 158 WDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
R G +K KY++++ NL+ N DFRR V LGQV+PE +V ++ +EMA D
Sbjct: 246 LGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDISPEEMASD 297
>gi|15224901|ref|NP_181390.1| transcript elongation factor IIS [Arabidopsis thaliana]
gi|3786016|gb|AAC67362.1| putative elongation factor [Arabidopsis thaliana]
gi|23297820|gb|AAN13033.1| putative elongation factor [Arabidopsis thaliana]
gi|26450199|dbj|BAC42218.1| putative elongation factor [Arabidopsis thaliana]
gi|330254456|gb|AEC09550.1| transcript elongation factor IIS [Arabidopsis thaliana]
Length = 378
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 128/241 (53%), Gaps = 41/241 (17%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYT--------------IPGDIEPAKIEKVDK-- 52
I+ A+DL+ W+ + +E+ +K T P + P K++K+ +
Sbjct: 71 IKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAPVKVQKLQRGD 130
Query: 53 --------RTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSR-- 102
R + + ++GV I + + D T+ + R ++V EK S DN S
Sbjct: 131 SAKSIKVERKEPDNKVVTGVKIER-KVPDIKVTNGTKIDYRGQAVKDEKV-SKDNQSSMK 188
Query: 103 -------------SMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 149
+M++CND R+ +RE + +AL +V+GEAD+ R+ VNA D +RVA++
Sbjct: 189 APAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERESVNASDPLRVAVS 248
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+ES MFEK R G K+KY++++ NL+D NPD RR V G++ PE ++ ++A++MA D
Sbjct: 249 VESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMASD 308
Query: 210 K 210
K
Sbjct: 309 K 309
>gi|37718881|gb|AAR01752.1| putative transcription elongation factor, 5'-partial [Oryza sativa
Japonica Group]
Length = 315
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 125/232 (53%), Gaps = 33/232 (14%)
Query: 9 IQDFASDLIVSWRNMSLEQMR----DERKGSYTIPGDIEPAKIEKVDKRTSE-----ECQ 59
IQ A+DL+ W+ + +E+ + E GS E A+ KVDK ++ E +
Sbjct: 16 IQSMATDLLGYWKKVVIEEGKKNGTTENVGSTNSAARAEKAQPMKVDKSSASGSVKPEKR 75
Query: 60 EISGVG----IVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLS-----------RSM 104
E++ G +KV+K+ N + + V+ E E T + D S+
Sbjct: 76 EVNVRGQKPESIKVEKITNNDSK--NQQVKVERAPKEATRTPDTKKPSSVPNGPPKLTSL 133
Query: 105 IRCNDCFREVVREKVCDALSKVSGEAD----EEIR---DEVNACDSVRVAIALESAMFEK 157
++CND R+ +RE + DA S+V GE EE+R DEV+A D RVA+ +ESA+FE+
Sbjct: 134 VKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDARDPFRVAVTVESALFER 193
Query: 158 WDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
R G +K KY++++ NL+ N DFRR V LGQV+PE +V ++ +EMA D
Sbjct: 194 LGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDISPEEMASD 245
>gi|18377737|gb|AAL67018.1| putative elongation factor [Arabidopsis thaliana]
Length = 378
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 128/241 (53%), Gaps = 41/241 (17%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYT--------------IPGDIEPAKIEKVDK-- 52
I+ A+DL+ W+ + +E+ +K T P + P K++K+ +
Sbjct: 71 IKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAPVKVQKLQRGD 130
Query: 53 --------RTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSR-- 102
R + + ++GV I + + D T+ + R ++V EK S DN S
Sbjct: 131 SAKSIKVERKEPDNKVVTGVKIER-KVPDIKVTNGTKIDYRGQAVKDEKV-SKDNQSSMK 188
Query: 103 -------------SMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 149
+M++CND R+ +RE + +AL +V+GEAD+ R+ VNA D +RVA++
Sbjct: 189 APAKAANAPPKLTAMLKCNDPVRDKIRELLMEALCRVAGEADDYERESVNASDPLRVAVS 248
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+ES MFEK R G K+KY++++ NL+D NPD RR V G++ PE ++ ++A++MA D
Sbjct: 249 VESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMASD 308
Query: 210 K 210
K
Sbjct: 309 K 309
>gi|194708758|gb|ACF88463.1| unknown [Zea mays]
Length = 376
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 118/230 (51%), Gaps = 29/230 (12%)
Query: 9 IQDFASDLIVSWRNMSLEQM-----RDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISG 63
IQ ASDL W+ + LE+ E + S G +E + KV+K ++ ++
Sbjct: 68 IQAVASDLFGYWKKVVLEETGKKNGSSENEKSMDSSGKVEKVRPMKVEKNSASASMKVEK 127
Query: 64 VGI---------VKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLS--------RSMIR 106
+ VKV+K N + S V S +T++ S S+++
Sbjct: 128 RDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTDAKKPASVPNGPPKLTSLVK 187
Query: 107 CNDCFREVVREKVCDALSKVSGEAD----EEIR---DEVNACDSVRVAIALESAMFEKWD 159
CND R+ +RE + +A +KV E +E+R DEV+ACD RVA+ +ESA+FE++
Sbjct: 188 CNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVESALFERFG 247
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
R G +K KY++++ NL+ N DFRR V +GQV PE + ++ EMA D
Sbjct: 248 RSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASD 297
>gi|226498648|ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
gi|194688540|gb|ACF78354.1| unknown [Zea mays]
gi|194707892|gb|ACF88030.1| unknown [Zea mays]
Length = 367
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 118/230 (51%), Gaps = 29/230 (12%)
Query: 9 IQDFASDLIVSWRNMSLEQM-----RDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISG 63
IQ ASDL W+ + LE+ E + S G +E + KV+K ++ ++
Sbjct: 68 IQAVASDLFGYWKKVVLEETGKKNGSSENEKSMDSSGKVEKVRPMKVEKNSASASMKVEK 127
Query: 64 VGI---------VKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLS--------RSMIR 106
+ VKV+K N + S V S +T++ S S+++
Sbjct: 128 RDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTDAKKPASVPNGPPKLTSLVK 187
Query: 107 CNDCFREVVREKVCDALSKVSGEAD----EEIR---DEVNACDSVRVAIALESAMFEKWD 159
CND R+ +RE + +A +KV E +E+R DEV+ACD RVA+ +ESA+FE++
Sbjct: 188 CNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVESALFERFG 247
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
R G +K KY++++ NL+ N DFRR V +GQV PE + ++ EMA D
Sbjct: 248 RSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASD 297
>gi|414873584|tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea mays]
Length = 318
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 118/230 (51%), Gaps = 29/230 (12%)
Query: 9 IQDFASDLIVSWRNMSLEQM-----RDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISG 63
IQ ASDL W+ + LE+ E + S G +E + KV+K ++ ++
Sbjct: 19 IQAVASDLFGYWKKVVLEETGKKNGSSENEKSMDSSGKVEKVRPMKVEKNSASASMKVEK 78
Query: 64 VGI---------VKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLS--------RSMIR 106
+ VKV+K N + S V S +T++ S S+++
Sbjct: 79 RDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTDAKKPASVPNGPPKLTSLVK 138
Query: 107 CNDCFREVVREKVCDALSKVSGEAD----EEIR---DEVNACDSVRVAIALESAMFEKWD 159
CND R+ +RE + +A +KV E +E+R DEV+ACD RVA+ +ESA+FE++
Sbjct: 139 CNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVESALFERFG 198
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
R G +K KY++++ NL+ N DFRR V +GQV PE + ++ EMA D
Sbjct: 199 RSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASD 248
>gi|242032519|ref|XP_002463654.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
gi|241917508|gb|EER90652.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
Length = 368
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 119/231 (51%), Gaps = 30/231 (12%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYT-----IPGDIEPAKIEKVDKRTSEECQEI-- 61
IQ A+DL W+ + LE+ + GS G +E + KV+K ++ ++
Sbjct: 68 IQAVAADLFGYWKKVVLEESGKKNGGSENERSSDSSGKVEKVRPMKVEKNSASASMKVEK 127
Query: 62 -------SGVGIVKVQKVDQNATS--------LSSNVVR-PESVVTEKTNSSDNLSRSMI 105
G VKV+K N + +S V R P++ T S S++
Sbjct: 128 RDVDVRGQKPGSVKVEKTASNGSRTQSVKVERVSKEVSRTPDAKKPASTPSGAPKLTSLV 187
Query: 106 RCNDCFREVVREKVCDALSKVSGEAD----EEIR---DEVNACDSVRVAIALESAMFEKW 158
+CND R+ +RE + +A +KVS E +E+R DEV+ACD RVA+ +ESA+FE+
Sbjct: 188 KCNDPTRDKIRELLAEAFAKVSRETSNDDRDEVRNILDEVDACDPYRVAVKVESALFERL 247
Query: 159 DRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
R G +K KY++++ NL+ N DFRR V +G+V PE + ++ EMA D
Sbjct: 248 GRSTGAHKTKYRSIMFNLRAENNTDFRRRVLIGEVTPEGLPDISPDEMASD 298
>gi|23617251|dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|125599607|gb|EAZ39183.1| hypothetical protein OsJ_23609 [Oryza sativa Japonica Group]
Length = 373
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 124/234 (52%), Gaps = 39/234 (16%)
Query: 9 IQDFASDLIVSWRNMSLEQ------MRDERKGSYTIPGD-IEPAKIEKVDKRTS------ 55
I+ ASDL+ W+ + +E+ +++ + S + + +EP K+EK R +
Sbjct: 76 IKATASDLLGHWKKVVIEEDKKNGALQNGKSSSTVVKVEKVEPMKVEKASPRATVNNNNM 135
Query: 56 ---------EECQEISGVGI----VKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSR 102
+ ++ S + +KV+KV + +SS V +P V L+
Sbjct: 136 DTRVVNHKGGKVEKFSNAELRTQSIKVEKVQKVVHKVSS-VEKPSPV----QGGPPRLT- 189
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEAD----EEIRD---EVNACDSVRVAIALESAMF 155
S+++C D R+ +R + DA S+VS E EE+R+ EV ACD R+A+ +E A+F
Sbjct: 190 SVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRIAVMVECALF 249
Query: 156 EKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+K ++GP K +Y++++ NLKD N DFRR V LGQV+PE I +T EMA D
Sbjct: 250 QKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASD 303
>gi|115471257|ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|215737106|dbj|BAG96035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 379
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 124/234 (52%), Gaps = 39/234 (16%)
Query: 9 IQDFASDLIVSWRNMSLEQ------MRDERKGSYTIPGD-IEPAKIEKVDKRTS------ 55
I+ ASDL+ W+ + +E+ +++ + S + + +EP K+EK R +
Sbjct: 82 IKATASDLLGHWKKVVIEEDKKNGALQNGKSSSTVVKVEKVEPMKVEKASPRATVNNNNM 141
Query: 56 ---------EECQEISGVGI----VKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSR 102
+ ++ S + +KV+KV + +SS V +P V L+
Sbjct: 142 DTRVVNHKGGKVEKFSNAELRTQSIKVEKVQKVVHKVSS-VEKPSPV----QGGPPRLT- 195
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEAD----EEIRD---EVNACDSVRVAIALESAMF 155
S+++C D R+ +R + DA S+VS E EE+R+ EV ACD R+A+ +E A+F
Sbjct: 196 SVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRIAVMVECALF 255
Query: 156 EKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+K ++GP K +Y++++ NLKD N DFRR V LGQV+PE I +T EMA D
Sbjct: 256 QKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASD 309
>gi|125557745|gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
Length = 373
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 123/234 (52%), Gaps = 39/234 (16%)
Query: 9 IQDFASDLIVSWRNMSLEQ------MRDERKGSYTIPGD-IEPAKIEKVDKRTS------ 55
I+ ASDL+ W+ + +E+ +++ + S + + +EP K+EK R +
Sbjct: 76 IKTTASDLLGHWKKVVIEEDKKNGALQNGKSSSTVVKVEKVEPMKVEKASPRATVNNNNM 135
Query: 56 ---------EECQEISGVGI----VKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSR 102
+ ++ S + +KV+KV + +SS V +P V L+
Sbjct: 136 DTRVVNHKGGKVEKFSNAELRTQSIKVEKVQKVVHKVSS-VEKPSPV----QGGPPRLT- 189
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEAD----EEIRD---EVNACDSVRVAIALESAMF 155
S+++C D R+ +R + DA S+VS E EE+R+ EV ACD R+A+ +E +F
Sbjct: 190 SVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVQACDPFRIAVMVECPLF 249
Query: 156 EKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+K ++GP K +Y++++ NLKD N DFRR V LGQV+PE I +T EMA D
Sbjct: 250 QKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASD 303
>gi|224086771|ref|XP_002307957.1| predicted protein [Populus trichocarpa]
gi|222853933|gb|EEE91480.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 77/115 (66%)
Query: 95 NSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM 154
S + S+ ++C+D R VR + ++L++V+ E + +R V++ D + VA +ES M
Sbjct: 265 GSFNKPSKEPVKCDDALRGKVRSILVESLTRVAKETEAGLRRAVSSRDPICVAADVESVM 324
Query: 155 FEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
F+K ++G +KY++VL NLKDPKNPD RR V LGQ+KPE +V MT++EMA +
Sbjct: 325 FQKMGAFNGAKTVKYRSVLFNLKDPKNPDLRRKVLLGQIKPEKLVTMTSEEMASN 379
>gi|147860975|emb|CAN82941.1| hypothetical protein VITISV_013128 [Vitis vinifera]
Length = 326
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 101/209 (48%), Gaps = 48/209 (22%)
Query: 7 KKIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQ-----EI 61
KKIQ ASDLI W+N+ +E+ +K GD+E + K E + ++
Sbjct: 77 KKIQALASDLIDIWKNIVIEETTKNKKN-----GDLEDKESPKPVTANPENVKATPLLKV 131
Query: 62 SGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCD 121
S +KV+K S N+V P + S+ +CND R+ VRE + +
Sbjct: 132 SKAENIKVEKQTSGVKKPSHNIVGPPKLT------------SISKCNDALRDKVRELLSE 179
Query: 122 ALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKN 181
ALSKV GEADE+I D VNACD +RVA+ + G D KN
Sbjct: 180 ALSKVVGEADEDIMDAVNACDPIRVAV------------FSG--------------DAKN 213
Query: 182 PDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
PD RR V LGQV PE ++ M +EMA D+
Sbjct: 214 PDLRRKVLLGQVMPERLLEMGPEEMASDR 242
>gi|224137638|ref|XP_002322607.1| predicted protein [Populus trichocarpa]
gi|222867237|gb|EEF04368.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 73/106 (68%)
Query: 105 IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGP 164
++C+D R VR + ++L +V+ E E++ + V D + VA +ES MFE+ ++G
Sbjct: 197 VKCSDGLRSKVRHILVESLCRVAKEVKEDLMEAVRLRDPIIVAADVESLMFERMGLFNGT 256
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
++KY+++L N+KDPKNPD RR V LGQ+KPE +V MTA+EMA ++
Sbjct: 257 KQLKYRSILFNMKDPKNPDLRRKVLLGQIKPEKLVTMTAEEMASNQ 302
>gi|224094063|ref|XP_002334806.1| predicted protein [Populus trichocarpa]
gi|222875111|gb|EEF12242.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 73/106 (68%)
Query: 105 IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGP 164
++C+D R VR + ++L +V+ E E++ + V D + VA +ES MFE+ ++G
Sbjct: 197 VKCSDGLRSKVRHILVESLCRVAKEVKEDLMEAVRLRDPIIVAADVESLMFERMGLFNGT 256
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
++KY+++L N+KDPKNPD RR + LGQ+KPE +V MTA+EMA ++
Sbjct: 257 KQLKYRSILFNMKDPKNPDLRRKLLLGQIKPEKLVTMTAEEMASNQ 302
>gi|297736471|emb|CBI25342.3| unnamed protein product [Vitis vinifera]
Length = 302
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 99/212 (46%), Gaps = 49/212 (23%)
Query: 7 KKIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISGVGI 66
KKIQ ASDLI W+N+ +E+ +K GD+E DK + +
Sbjct: 67 KKIQALASDLIDIWKNIVIEETTKNKKN-----GDLE-------DKESPKP--------- 105
Query: 67 VKVQKVDQNATSL---SSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDAL 123
V + AT L S N+V P + S+ +CND R+ VRE + +AL
Sbjct: 106 VTANPENVKATPLLKPSHNIVGPPKLT------------SISKCNDALRDKVRELLSEAL 153
Query: 124 SKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPK--N 181
SKV GEADE+I D VNACD +RVA+++ES MFEKWD + P + L P N
Sbjct: 154 SKVVGEADEDIMDAVNACDPIRVAVSVESVMFEKWDTPEAPPFLSLGTCLSTSPFPSTLN 213
Query: 182 P----------DFRRNVHLGQVKPETIVGMTA 203
P + H G + P GMTA
Sbjct: 214 PSHSPTPSGILSLNPDSHTGLLNP-VAAGMTA 244
>gi|255567202|ref|XP_002524582.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536135|gb|EEF37790.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 337
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 8 KIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISGVGIV 67
KI D ++ +I +W L+Q+ R Y I+ + + ++ ++ +
Sbjct: 64 KIVDLSARVIAAWCKKLLKQL--HRYEDYV--SSIQKQPCTRTTAPSKDQTSQVVAT-VP 118
Query: 68 KVQKVDQNATSLSSNVVRPESVVTEK----------TNSSDNLSRSMIRCNDCFREVVRE 117
K K+D NA + ++ ++ +K T + + S+ + ++ RE +RE
Sbjct: 119 KEAKIDINANPRTVKALKVQNKSFKKVSRTQTPKILTPHPHSKAASIPKSSNSLRESIRE 178
Query: 118 KVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLK 177
++ ALS V EA D + CD +++A +LESA+F KW + + KY+++L N+K
Sbjct: 179 QISQALSMVFNEAKH---DTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIK 235
Query: 178 DPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
DPKNPDFRR + +G++K E + M A +MA D+M
Sbjct: 236 DPKNPDFRRKILVGEIKAEEVAEMDAGQMASDEM 269
>gi|195622302|gb|ACG32981.1| transcription elongation factor A protein 2 [Zea mays]
gi|223947497|gb|ACN27832.1| unknown [Zea mays]
gi|413932648|gb|AFW67199.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 30/231 (12%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYT-----IPGDIE---PAKIEKVDKRTSEECQ- 59
IQ A+DL W+ + LE+ + GS G +E P KIEK S + +
Sbjct: 68 IQAVAADLFGYWKKVVLEESGKKNGGSENERSSDSSGKVEKVRPVKIEKNSASASMKLEK 127
Query: 60 ---EISG--VGIVKVQKVDQNATS--------LSSNVVR-PESVVTEKTNSSDNLSRSMI 105
++ G VKV+K N + +S V+R P+S + S++
Sbjct: 128 RDVDVRGQKPNNVKVEKTTSNGSKAQSVKVERVSKEVIRTPDSKRPASVPNGHPKLTSLV 187
Query: 106 RCNDCFREVVREKVCDALSKVSGEADEE-------IRDEVNACDSVRVAIALESAMFEKW 158
+CND R+ +RE + +A VS E ++ I DEV ACD RVA+ +ESA+FE+
Sbjct: 188 KCNDPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFERL 247
Query: 159 DRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
G ++ KY++++ NL+ N DFRR V +G V PE + + EMA D
Sbjct: 248 GPSTGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMASD 298
>gi|226504526|ref|NP_001149284.1| transcription elongation factor A protein 2 [Zea mays]
gi|195626030|gb|ACG34845.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 40/236 (16%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYT-----IPGDIEPAKIEKVDKRTSEECQEISG 63
IQ A+DL W+ + LE+ + GS G +E A+ K++K ++ ++
Sbjct: 68 IQAVAADLFGYWKKVVLEESGKKNGGSENERSSDSSGKVEKARSVKIEKNSASASMKLEK 127
Query: 64 VGI---------VKVQKVDQNATSLSS--------------NVVRPESVVTEKTNSSDNL 100
+ KV+K N + S + RP SV N L
Sbjct: 128 RDVDVRGQKPNNAKVEKTTSNGSKAQSVKVERVSKEVIRTPDAKRPASV----PNGHPKL 183
Query: 101 SRSMIRCNDCFREVVREKVCDALSKVSGEADEE-------IRDEVNACDSVRVAIALESA 153
+ S+++CND R+ +RE + +A +VS E ++ I DEV A D RVA+ +ESA
Sbjct: 184 T-SLVKCNDPTRDKIRELLAEAFVRVSRETSDDDRDEVRNILDEVEARDPYRVAVTVESA 242
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+FE+ G ++ KY++++ NL+ N DFRR V +G V PE + ++ EMA D
Sbjct: 243 LFERLGPSTGTHRAKYRSIMFNLRAESNTDFRRRVLIGLVAPERLPDVSPDEMASD 298
>gi|168033194|ref|XP_001769101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679630|gb|EDQ66075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%)
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYD 162
++ + D R+ RE + +A K E +E V D VRVA+A+ESA+F K +
Sbjct: 199 NLTKAGDSTRDRFREFLIEAFKKCCSEVTDEHLAMVKKTDLVRVAVAVESALFSKLGQSK 258
Query: 163 GPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
G K KY++++ NLKD NPDFRR + +G++KPE I MTA +MA D
Sbjct: 259 GSEKAKYRSIMFNLKDQNNPDFRRRILIGEIKPEEIANMTADDMASD 305
>gi|15227992|ref|NP_181801.1| F-box protein [Arabidopsis thaliana]
gi|4512680|gb|AAD21734.1| hypothetical protein [Arabidopsis thaliana]
gi|330255067|gb|AEC10161.1| F-box protein [Arabidopsis thaliana]
Length = 737
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGE-ADEEIRDEVNACDSVRVAIALESAMFEKWDRY 161
+M + D R+ VRE + +L KV+ E D E++ V ACD VA+++ESAMFEK +
Sbjct: 598 TMKKTGDSKRDKVREILQTSLVKVASEIVDTEMKTRVTACDPSVVAVSVESAMFEKLGCF 657
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
GP+K KY+++L N+ D NPD RR V +G++ E +V M +EM +K+ QR
Sbjct: 658 MGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKEVQR 713
>gi|413932649|gb|AFW67200.1| hypothetical protein ZEAMMB73_561219 [Zea mays]
Length = 246
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 92/168 (54%), Gaps = 17/168 (10%)
Query: 49 KVDKRTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCN 108
KV+K TS + S VKV++V + + + RP SV N L+ S+++CN
Sbjct: 19 KVEKTTSNGSKAQS----VKVERVSKEVIR-TPDSKRPASV----PNGHPKLT-SLVKCN 68
Query: 109 DCFREVVREKVCDALSKVSGEADEE-------IRDEVNACDSVRVAIALESAMFEKWDRY 161
D R+ +RE + +A VS E ++ I DEV ACD RVA+ +ESA+FE+
Sbjct: 69 DPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFERLGPS 128
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
G ++ KY++++ NL+ N DFRR V +G V PE + + EMA D
Sbjct: 129 TGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMASD 176
>gi|168041433|ref|XP_001773196.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675555|gb|EDQ62049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 353
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%)
Query: 112 REVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKA 171
R+ RE + DA K E +E V + D V+V +A+E+ +F K ++G K KY++
Sbjct: 186 RDRFRELLLDAFKKCCSELTDEHSKIVKSTDFVKVTLAVETVLFSKLGLFNGKEKAKYRS 245
Query: 172 VLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+L NLKD NPDFRR V +G++K E IV MTA +MA D
Sbjct: 246 ILFNLKDQNNPDFRRRVLMGEIKSEEIVNMTADDMASD 283
>gi|302757165|ref|XP_002962006.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
gi|302775328|ref|XP_002971081.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300161063|gb|EFJ27679.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300170665|gb|EFJ37266.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
Length = 303
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%)
Query: 96 SSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMF 155
+S + +R + + ND R+ +RE + +A KV EA+ + NA D V+VA+ +E+A+F
Sbjct: 120 NSSSKARPLPKSNDATRDKMREVLLEAFQKVPQEAEGQELARANAKDPVQVAVEVENALF 179
Query: 156 EKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
K + K KY++++ NLKDP NPD RR + LGQ+ + M+A++MA D+
Sbjct: 180 SKLESTKVDKKAKYRSIVFNLKDPNNPDLRRRLLLGQISGSQLTTMSAEDMASDQ 234
>gi|15233998|ref|NP_193607.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|4539391|emb|CAB37457.1| putative protein [Arabidopsis thaliana]
gi|7268666|emb|CAB78874.1| putative protein [Arabidopsis thaliana]
gi|332658681|gb|AEE84081.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 266
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEA-DEEIRDEVNACDSVRVAIALESAMFEKWDRY 161
+M + D R+ VRE + +L+KV+ E D E++ V ACD VA+++E+AMFE +
Sbjct: 109 TMKKTGDSKRDKVREILQTSLAKVASEVVDTEMKTRVTACDPWVVAVSVETAMFENLGCF 168
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
GP K KY+++L N+ D NPD RR V LG++ E +V M +EM
Sbjct: 169 MGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEKEEMG 214
>gi|255567144|ref|XP_002524553.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536106|gb|EEF37761.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 152
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 55/81 (67%)
Query: 131 DEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHL 190
+E D + CD +++A +LESA+F KW + + KY+++L N+KDPKNPDFRR + +
Sbjct: 4 NEAKHDTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKILV 63
Query: 191 GQVKPETIVGMTAKEMAGDKM 211
G++K E + M A +MA D+M
Sbjct: 64 GEIKAEEVAEMDAGQMASDEM 84
>gi|303290875|ref|XP_003064724.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453750|gb|EEH51058.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 325
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
D R+ RE + +A+++ G D E D + AIA+E+AM +W YK
Sbjct: 158 GDPLRDRTRELLAEAIAQAIGAPDVYASVE----DVAQTAIAIENAMHAQWSDTGKEYKA 213
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
K++ + NLKDPKNPD RR+V G + P ++ ++ +E+ D+
Sbjct: 214 KFRQLSFNLKDPKNPDLRRSVADGLISPAVLLDLSPEELGSDE 256
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +A++ +D CD ++A +E+ ++++ D Y+ + ++ +
Sbjct: 186 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIETHIYQELKSTDMKYRNRVRSRIS 242
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + PE I MTA+EMA D++
Sbjct: 243 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 279
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +A+++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 187 VRDKCVEMLS-AALKAEDDFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + PE I MTA+EMA D++
Sbjct: 244 NLKDPRNPGLRRNVLSGTISPELIAKMTAEEMASDEL 280
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
A D +A +ES F++++ D Y+ + ++ + NLKDPKNP+ R V +G +KPE +
Sbjct: 149 AADPDELAERIESTCFDEFNNTDTKYRSRIRSRVANLKDPKNPNLRLGVLIGSIKPERLA 208
Query: 200 GMTAKEMAGDKMLSCYQR 217
MTA+EMA D++ Q+
Sbjct: 209 KMTAEEMASDELKQLRQK 226
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +A++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 186 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 242
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + PE I MTA+EMA D++
Sbjct: 243 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 279
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +A++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 186 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 242
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + PE I MTA+EMA D++
Sbjct: 243 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 279
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +A++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 186 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 242
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + PE I MTA+EMA D++
Sbjct: 243 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 279
>gi|91834|pir||PS0180 transcription elongation factor S-II-related protein L122, hepatic
- mouse (fragment)
Length = 289
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +A++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 128 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 184
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + PE I MTA+EMA D++
Sbjct: 185 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 221
>gi|3133178|dbj|BAA28177.1| unnamed protein product [Mus musculus]
Length = 292
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +A++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 131 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 187
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + PE I MTA+EMA D++
Sbjct: 188 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 224
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
Query: 74 QNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCF--REVVREKVCDALSKVSGEAD 131
+ + S+ S V P+ T + S+ + S+ C+ + VR+K + LS + +A+
Sbjct: 156 ERSNSVGSKVETPK---TPSSPSTPTFAPSVCLLAPCYLTGDSVRDKCVEMLS-AALKAE 211
Query: 132 EEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLG 191
++ +D CD ++A +E ++++ D Y+ + ++ + NLKDP+NP RRNV G
Sbjct: 212 DDFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSG 269
Query: 192 QVKPETIVGMTAKEMAGDKM 211
+ P I MTA+EMA D++
Sbjct: 270 AISPGLIAKMTAEEMASDEL 289
>gi|348544613|ref|XP_003459775.1| PREDICTED: transcription elongation factor A protein 2-like
[Oreochromis niloticus]
Length = 308
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
DC R RE + AL + + + IR D +A +E +F+++ D YK
Sbjct: 139 TDCVRSKCRELLVVALQ--TDDDHKAIR-----VDCEHLAAQIEEQIFQEFKSTDMKYKT 191
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ ++ + NLKD KNP+ RRNV G + P I MTA+EMA ++
Sbjct: 192 RLRSRISNLKDQKNPELRRNVLCGNISPHRIACMTAEEMASAEL 235
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D VR++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I M
Sbjct: 135 DCVRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 194
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 195 TSEEMASDEL 204
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E +++++ D YK + ++ + NLKD KNPD RRNV G + PE I M
Sbjct: 163 DCEHMAAQIEDYIYQEFKSTDMKYKTRLRSRISNLKDQKNPDLRRNVLCGNISPERIASM 222
Query: 202 TAKEMAGDKM 211
TA+EMA ++
Sbjct: 223 TAEEMASPEL 232
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 80 SSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDE 137
+S+ + ES T + + + SM C+ + VR+K + LS + +AD++ +D
Sbjct: 150 NSSKSKAESPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLS-AALKADDDYKDY 208
Query: 138 VNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPET 197
CD ++A +E ++++ D Y+ + ++ + NLKDP+NP RRNV G +
Sbjct: 209 GVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGL 266
Query: 198 IVGMTAKEMAGDKM 211
I MTA+EMA D++
Sbjct: 267 IAKMTAEEMASDEL 280
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 80 SSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDE 137
+S+ + ES T + + + SM C+ + VR+K + LS + +AD++ +D
Sbjct: 122 NSSKSKAESPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLS-AALKADDDYKDY 180
Query: 138 VNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPET 197
CD ++A +E ++++ D Y+ + ++ + NLKDP+NP RRNV G +
Sbjct: 181 GVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGL 238
Query: 198 IVGMTAKEMAGDKM 211
I MTA+EMA D++
Sbjct: 239 IAKMTAEEMASDEL 252
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 80 SSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDE 137
+S+ + ES T + + + SM C+ + VR+K + LS + +AD++ +D
Sbjct: 150 NSSKSKAESPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLS-AALKADDDYKDY 208
Query: 138 VNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPET 197
CD ++A +E ++++ D Y+ + ++ + NLKDP+NP RRNV G +
Sbjct: 209 GVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGL 266
Query: 198 IVGMTAKEMAGDKM 211
I MTA+EMA D++
Sbjct: 267 IAKMTAEEMASDEL 280
>gi|426328285|ref|XP_004024930.1| PREDICTED: transcription elongation factor A protein 3 [Gorilla
gorilla gorilla]
Length = 327
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 87 ESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDEVNACDSV 144
ES T + + + SM C+ + VR+K + LS + +AD++ +D CD
Sbjct: 136 ESPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLS-AALKADDDYKDYGVNCD-- 192
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
++A +E ++++ D Y+ + ++ + NLKDP+NP RRNV G + I MTA+
Sbjct: 193 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 252
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 253 EMASDEL 259
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
++A +E +F++ D Y+ + ++ + NLKDPKNP RRNV G ++P I MTA+
Sbjct: 245 KMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPALRRNVLCGAIEPSLIARMTAE 304
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 305 EMASDEL 311
>gi|225716628|gb|ACO14160.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 181
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR K + LS+ D+ I + CD + I E ++F ++ D YK + ++ +
Sbjct: 20 VRMKCREMLSQALQAGDDYIAIGAD-CDELGAQI--EESIFSEFQNTDPKYKNRVRSRIA 76
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKD KNP+ RRNV G V P+ + MTA+EMA D++
Sbjct: 77 NLKDIKNPNLRRNVLCGNVAPDRMAKMTAEEMASDEL 113
>gi|405944776|pdb|2LW4|A Chain A, Solution Nmr Structure Of Human Transcription Elongation
Factor A Protein 2, Central Domain, Northeast Structural
Genomics Consortium (Nesg) Target Hr8682b
Length = 113
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I M
Sbjct: 36 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 95
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 96 TSEEMASDEL 105
>gi|444729710|gb|ELW70117.1| Transcription elongation factor A protein 2 [Tupaia chinensis]
Length = 298
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 113 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAV 172
+ +R K C+ L+ + + D + C+S+ I E ++F DG YK + ++
Sbjct: 135 DAIRSKCCEMLT-AALQKDLDYVALGADCESLSAQI--EESIFRDIGNTDGKYKNRVRSR 191
Query: 173 LGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ NL+D KNPD RR V G + P+ I MTA+EMA D+M
Sbjct: 192 IFNLRDAKNPDLRRKVLRGVITPQQIAVMTAEEMASDEM 230
>gi|213623950|gb|AAI70441.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ E V AL + D++ + C+ R+A +E ++ + D Y+ +
Sbjct: 482 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 534
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ + NLKDPKNP+ R+NV G V P++I MTA+EMA D++
Sbjct: 535 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDEL 577
>gi|147904545|ref|NP_001090166.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|10801727|dbj|BAB16755.1| transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ E V AL + D++ + C+ R+A +E ++ + D Y+ +
Sbjct: 482 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 534
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ + NLKDPKNP+ R+NV G V P++I MTA+EMA D++
Sbjct: 535 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDEL 577
>gi|3347834|gb|AAC64679.1| transcription elongation factor S-II [Xenopus laevis]
Length = 289
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ E V AL + D++ + C+ R+A +E ++ + D Y+ +
Sbjct: 126 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 178
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ + NLKDPKNP+ R+NV G V P++I MTA+EMA D++
Sbjct: 179 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDEL 221
>gi|213625366|gb|AAI70443.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ E V AL + D++ + C+ R+A +E ++ + D Y+ +
Sbjct: 482 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 534
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ + NLKDPKNP+ R+NV G V P++I MTA+EMA D++
Sbjct: 535 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDEL 577
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
E+TN+SD+ S R +D R RE + AL ++ ADEE
Sbjct: 118 EETNASDSFIPSFPRAPSTSDSVRMKCREMLAAALRTGDDYIAIGADEE----------- 166
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 167 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 227 EMASDEL 233
>gi|380807497|gb|AFE75624.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 155
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +AD++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 28 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 84
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 85 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 121
>gi|301620068|ref|XP_002939405.1| PREDICTED: transcription elongation factor A protein 3-like
[Xenopus (Silurana) tropicalis]
Length = 453
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K D ++ + + D++ + C+ R+A +E ++ D Y+ + ++ +
Sbjct: 292 VRDKCVDMVAS-ALKTDDDYKQFGTNCE--RLAWEIEECIYRDIKATDMKYRNRIRSRIS 348
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDPKNP+ R+NV G V P+ I MTA+EMA D++
Sbjct: 349 NLKDPKNPNLRKNVLCGVVTPQNIATMTAEEMASDEL 385
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +AD++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 187 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 244 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 280
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +AD++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 187 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 244 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 280
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +AD++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 187 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 244 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 280
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+ +E A+F+++ D YK + ++ + NLKD KNP+ RRNV G + P+ M+A+E
Sbjct: 170 LGAQIEEAVFQEFKNTDAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEE 229
Query: 206 MAGDKM 211
MA D++
Sbjct: 230 MASDEL 235
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +AD++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 188 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 244
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 245 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 281
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I M
Sbjct: 162 DCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 221
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 222 TSEEMASDEL 231
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I M
Sbjct: 162 DCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 221
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 222 TSEEMASDEL 231
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I M
Sbjct: 135 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 194
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 195 TSEEMASDEL 204
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 87 ESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDEVNACDSV 144
E+ T + + + SM C+ + VR+K + LS + +AD++ +D CD
Sbjct: 158 EAPKTPSSPLTPTFAPSMCLLAPCYLTGDSVRDKCVEMLS-AALKADDDYKDYGVNCD-- 214
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
++A +E ++++ D Y+ + ++ + NLKDP+NP RRNV G + I MTA+
Sbjct: 215 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 274
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 275 EMASDEL 281
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I M
Sbjct: 162 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 221
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 222 TSEEMASDEL 231
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 141 CDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
CD + I E +F ++ D YK + ++ + NLKD KNP+ RRNV G V P+ I
Sbjct: 173 CDELGAQI--EECIFLEFKNTDMKYKNRVRSRISNLKDAKNPNLRRNVLCGNVSPDRIAK 230
Query: 201 MTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 231 MTAEEMASDEL 241
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR K C L + + D++ + CD +A +E +F+++ D YK + ++ +
Sbjct: 148 VRNK-CRELLVAALQTDDDYKTIGVDCD--HLAAQIEHQIFQEFKSTDMKYKARLRSRIS 204
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKD KNPD RRNV G + + I MTA+EMA ++
Sbjct: 205 NLKDQKNPDLRRNVLCGNISAQRIACMTAEEMASAEL 241
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAI 148
E+TN+SD+ S R +D R RE + AL D+ I D +
Sbjct: 166 EETNASDSFIPSFPRAPSTSDSVRMKCREMLAAALRT----GDDYI---AIGADEEELGS 218
Query: 149 ALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAG 208
+E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+EMA
Sbjct: 219 QIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMAS 278
Query: 209 DKM 211
D++
Sbjct: 279 DEL 281
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I M
Sbjct: 162 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 221
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 222 TSEEMASDEL 231
>gi|226478976|emb|CAX72983.1| RNA polymerase II elongation factor [Schistosoma japonicum]
Length = 317
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 92 EKTNSSDNLSRSM-----IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRV 146
E T S N SR + ND R RE + AL SG A +S +
Sbjct: 133 EPTEPSGNASRGFFPVHTLTTNDQVRLKAREMLQSALE--SGNIPS------GAYESEFL 184
Query: 147 AIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEM 206
AI +ES++++ ++ D YK + + + NL+D NP+ R NV +G V P+ + MT++EM
Sbjct: 185 AIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEEM 244
Query: 207 AGDKM 211
A +M
Sbjct: 245 ASKEM 249
>gi|427797651|gb|JAA64277.1| Putative transcription elongation factor a sii 1, partial
[Rhipicephalus pulchellus]
Length = 292
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 136 DEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKP 195
D C++ +A +E +++ ++ + YK + ++ + NLKD KNP R NV G ++P
Sbjct: 149 DMPEGCNTDSLAAKIEESIYNEFGDTNNKYKNRVRSRVSNLKDSKNPALRINVLHGAIEP 208
Query: 196 ETIVGMTAKEMAGDKMLSCYQR 217
E I MTA+EMA D M QR
Sbjct: 209 ERIARMTAEEMASDDMKQLRQR 230
>gi|348588983|ref|XP_003480244.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Cavia
porcellus]
Length = 2019
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 17 IVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNA 76
I W+ L +M G +P K EK+ K T+ S G + Q+V +
Sbjct: 832 IKKWQLAPLRKM-----GQPVLPRRSSEEKSEKIPKETTNIICTASKPGTHEKQEVKRKK 886
Query: 77 TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRD 136
V P + K ++ D R+ VR + D L K E++ ++ +
Sbjct: 887 VEKGVPSVHPAAPRASKPSA------------DQIRQSVRHSLKDILMKRLTESNLKVPE 934
Query: 137 EVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPE 196
E A +VA +E +F + D YK KY++++ NLKDPKN + V G+V P+
Sbjct: 935 EKAA----KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 990
Query: 197 TIVGMTAKEMAGDKMLSCYQR 217
++ M+++E+A K L+ ++R
Sbjct: 991 HLIKMSSEELAS-KELAAWRR 1010
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +AD++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 227 VRDKCVEMLS-AALKADDDYKDYGINCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 283
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 284 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 320
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 85 RPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVN-ACDS 143
RPE T T + C D R RE + AL + D D V D
Sbjct: 113 RPELPRTPSTPRITTFPPVPVTC-DAVRNKCREMLAIAL-----QTDH---DHVAIGADC 163
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
R++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I MT+
Sbjct: 164 KRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTS 223
Query: 204 KEMAGDKM 211
+EMA D++
Sbjct: 224 EEMASDEL 231
>gi|358254214|dbj|GAA54231.1| transcription elongation factor S-II, partial [Clonorchis sinensis]
Length = 143
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
A +S +AI +ESA+++ ++ D YK + + + NL+D NP+ R NV +G V P+ +
Sbjct: 5 AYESEFLAIRIESAIYDIFNNTDSKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVNPDKLA 64
Query: 200 GMTAKEMAGDKM 211
MT++EMA +M
Sbjct: 65 SMTSEEMASKEM 76
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 80 SSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDE 137
+S+ + E+ T + S+ + S+ C+ + VR+K + LS + +A+++ +D
Sbjct: 149 NSSKSKAETPKTPTSPSTPTFAPSICLLAPCYLTGDSVRDKCVEMLS-AALKAEDDYKDY 207
Query: 138 VNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPET 197
CD ++A +E ++++ D Y+ + ++ + NLKDP+NP RRNV G +
Sbjct: 208 GVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGL 265
Query: 198 IVGMTAKEMAGDKM 211
I MTA+EMA D++
Sbjct: 266 IAKMTAEEMASDEL 279
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
E+TN+SD+ S R +D R RE + AL ++ ADEE
Sbjct: 118 EETNASDSFIPSFPRAPSTSDSVRMKCREMLAAALRTGDDYIAIGADEE----------- 166
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ +TA+
Sbjct: 167 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARLTAE 226
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 227 EMASDEL 233
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD +NPD RRNV G + P+ I M
Sbjct: 162 DCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDARNPDLRRNVLCGAITPQQIAVM 221
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 222 TSEEMASDEL 231
>gi|126342513|ref|XP_001362316.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
E+TN+SD+ S R +D R RE + AL ++ ADEE
Sbjct: 97 EETNASDSFIPSFPRAPSTSDSVRMKCREMLAAALRTGDDYIAIGADEE----------- 145
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ +TA+
Sbjct: 146 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARLTAE 205
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 206 EMASDEL 212
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I M
Sbjct: 162 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 221
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 222 TSEEMASDEL 231
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD +NPD RRNV G + P+ I M
Sbjct: 138 DCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDARNPDLRRNVLCGAITPQQIAVM 197
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 198 TSEEMASDEL 207
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 81/150 (54%), Gaps = 21/150 (14%)
Query: 77 TSLSSNVVRPESVVTEKTNSSDNLSR--------SMIRCNDCFR-------EVVREKVCD 121
+S +S++ RP T+++NSS + ++ SM+ + C + +R+K +
Sbjct: 136 SSATSSLKRPS---TKRSNSSKSKAKTPKTPSGPSMLAPSPCLLSPRYLTGDCIRDKCVE 192
Query: 122 ALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKN 181
LS V+ +A+++ +D CD ++A +E ++ + D Y+ + ++ + NLKDPKN
Sbjct: 193 MLS-VALKAEDDYKDYGVNCD--KMASEIEDHIYRELKSTDMKYRNRVRSRISNLKDPKN 249
Query: 182 PDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
P RRNV G + I M A+EMA D++
Sbjct: 250 PGLRRNVLSGAISTGLIAKMMAEEMASDEL 279
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E A+F+++ + YK + ++ + NLKD KNP+ RRNV G + P+ MTA+EMA D
Sbjct: 174 IEDAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDFFARMTAEEMASD 233
Query: 210 KM 211
++
Sbjct: 234 EL 235
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D + +E A+F++ D YK + ++ + NLKD KNP+ R+NV G + P+ M
Sbjct: 167 DEEELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDTKNPNLRKNVLCGNIAPDRFAKM 226
Query: 202 TAKEMAGDKM 211
TA+EMA D++
Sbjct: 227 TAEEMASDEL 236
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D + +E A+F+++ D YK + ++ + NLKD KNP+ RRNV G + P M
Sbjct: 169 DDEELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDGKNPNLRRNVLCGNISPIVFAKM 228
Query: 202 TAKEMAGDKM 211
+A+EMA D++
Sbjct: 229 SAEEMASDEL 238
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 47/221 (21%)
Query: 2 KASSRKKIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEI 61
K S+ +++ A LI SW+ ++ DE PG E +TSEE ++
Sbjct: 59 KQSTDEEVTSLAKSLIKSWK-----KLLDE-------PGSGE---------KTSEEKRKE 97
Query: 62 SGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSS----DNLSRSMIRC-------NDC 110
I+ ++S S R ES + TNS D+ S + +D
Sbjct: 98 QSTPII--------SSSQESPDAREESCSSSNTNSRSEPLDDTPGSFVNAFPRAASTSDP 149
Query: 111 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
R RE + +AL D+ I + CD + I E +F+++ D YK + +
Sbjct: 150 IRVKCREMLANALQT----GDDYIAIGAD-CDELGAQI--EDFIFQEFKNTDMKYKNRVR 202
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ + NLKD KNP+ RR V G + PE + MTA+EMA D++
Sbjct: 203 SRISNLKDVKNPNLRRTVLCGSITPERMAKMTAEEMASDEL 243
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 43/216 (19%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K I P E
Sbjct: 55 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSP-----------EA 103
Query: 58 CQEISGVGIVKVQKVDQNA--TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVV 115
+E + G V +K + NA T LSS P ++SD++ ++C RE++
Sbjct: 104 REESTSSGNVSNRKDETNARDTYLSSFPRAP--------STSDSVR---LKC----REML 148
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
+ ++ ADEE + +E A++++ D YK + ++ + N
Sbjct: 149 AAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISN 197
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
LKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 198 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 233
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I M
Sbjct: 219 DLERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 278
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 279 TSEEMASDEL 288
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 87 ESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDEVNACDSV 144
E+ T + S+ + S+ C+ + VR+K + LS + +A+++ +D CD
Sbjct: 157 ETPKTPTSPSTPTFAPSVCLLAPCYLTGDSVRDKCVEMLS-AALKAEDDYKDYGVNCD-- 213
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
++A +E ++++ D Y+ + ++ + NLKDP+NP RRNV G + I MTA+
Sbjct: 214 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAE 273
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 274 EMASDEL 280
>gi|50552628|ref|XP_503724.1| YALI0E09196p [Yarrowia lipolytica]
gi|49649593|emb|CAG79314.1| YALI0E09196p [Yarrowia lipolytica CLIB122]
Length = 295
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 2 KASSRKKIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEI 61
+ SS +I D +I SW++ Q RD K +E K K + R +
Sbjct: 54 RTSSDSRISDLVKKMIKSWKDTVTAQKRDASK-------KVEGKKETKEESRPVKSSSAS 106
Query: 62 SGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCD 121
SG NATS + P S ++T + D +S + + + VR + D
Sbjct: 107 SG-----------NATSYT-----PPS--GQRTPAKDGVS------TEIYSDKVRNRCID 142
Query: 122 ALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKN 181
+EV AC A A+E+ +++ + G Y+ K +++ NLKDPKN
Sbjct: 143 VTYTALAVGMTAHPNEVLAC-----AKAIENEVYKMENGTGGNYRPKMRSLYINLKDPKN 197
Query: 182 PDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
P R NV G++ E + M+ +EMA D++
Sbjct: 198 PGLRGNVISGKISAERLCRMSPQEMASDEL 227
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 141 CDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
CD + I E +F+++ D YK + ++ + NLKD KNP+ RR V G V PE +
Sbjct: 175 CDELGAQI--EECIFQEFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAK 232
Query: 201 MTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 233 MTAEEMASDEL 243
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I M
Sbjct: 169 DCKRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQRIAVM 228
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 229 TSEEMASDEL 238
>gi|441639245|ref|XP_003280185.2| PREDICTED: transcription elongation factor A protein 2 [Nomascus
leucogenys]
Length = 443
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 85 RPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVN-ACDS 143
RPE T + C D R RE + AL + RD V D
Sbjct: 257 RPELPRAPSTPRITTFPPVPVTC-DAVRSKCREMLAAAL--------QTDRDHVAIGADC 307
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
R++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I MT+
Sbjct: 308 ERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTS 367
Query: 204 KEMAGDKM 211
+EMA D++
Sbjct: 368 EEMASDEL 375
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E A+F+++ + YK + ++ + NLKD KNP+ RRNV G + P+ M+A+EMA D
Sbjct: 175 IEEAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASD 234
Query: 210 KM 211
++
Sbjct: 235 EL 236
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +AD++ +D CD ++A +E + ++ D Y+ + ++ +
Sbjct: 189 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIHQELKSTDMKYRNRVRSRIS 245
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 246 NLKDPRNPGLRRNVLSGAISTGLIAKMTAEEMASDEL 282
>gi|449494108|ref|XP_004175278.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Taeniopygia guttata]
Length = 267
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D + +E A+F++ D YK + ++ + NLKD KNP+ R+NV G + P+ M
Sbjct: 130 DEEELGSLIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKM 189
Query: 202 TAKEMAGDKM 211
TA+EMA D++
Sbjct: 190 TAEEMASDEL 199
>gi|126342557|ref|XP_001363001.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
E+T++SD+ S R +D R RE + AL ++ ADEE
Sbjct: 97 EETDASDSFIPSFPRAPSTSDSVRMKCREMLAAALRTGDDYIAIGADEE----------- 145
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 146 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAE 205
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 206 EMASDEL 212
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
D + +E A+F++ D YK + ++ + NLKD KNP+ R+NV G + P+
Sbjct: 165 GADEEELGSLIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFA 224
Query: 200 GMTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 225 KMTAEEMASDEL 236
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
D + +E A+F++ D YK + ++ + NLKD KNP+ R+NV G + P+
Sbjct: 165 GADEEELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFA 224
Query: 200 GMTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 225 KMTAEEMASDEL 236
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
E+T++SD+ S R +D R RE + AL ++ ADEE
Sbjct: 118 EETDASDSFIPSFPRAPSTSDSVRMKCREMLAAALRTGDDYIAIGADEE----------- 166
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 167 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 227 EMASDEL 233
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
+D R RE + +AL +GE I D + +E +F+++ D YK
Sbjct: 131 SDSIRLKCREMLANALQ--TGEDYIAI-----GADCEELGAQIEECIFQEFKNTDMKYKN 183
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ ++ + NLKD KNP+ RR V G V PE + MTA+EMA D++
Sbjct: 184 RVRSRISNLKDMKNPNLRRTVLCGSVSPERMAKMTAEEMASDEL 227
>gi|297827973|ref|XP_002881869.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
gi|297327708|gb|EFH58128.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 23/113 (20%)
Query: 106 RCNDCFREVVREKVCDALSKVSGEA-DEEIRDEVNACDSVRVAIALESAMFEKWDRYDGP 164
+ D R+ VRE + +L+KV+ E D E++ V ACD VAI++ESAMFE
Sbjct: 111 KTGDSKRDKVREILQTSLAKVATEVVDTEMKTRVTACDPWVVAISVESAMFE-------- 162
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
NPD RR V +G++ E +V M +EM +K+ QR
Sbjct: 163 --------------SNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKEVQR 201
>gi|428183038|gb|EKX51897.1| hypothetical protein GUITHDRAFT_102510 [Guillardia theta CCMP2712]
Length = 298
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 92 EKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALE 151
EK S D +++ D R VRE A + GE+D + +D ++ +E
Sbjct: 109 EKVKSEDKVTKKPAEPVDGKRLKVRELFEKAFADWKGESDVDRKD---------LSARIE 159
Query: 152 SAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAG 208
SAM+E + + Y K+V NL DPKNPDFR V G + E I +++ +MAG
Sbjct: 160 SAMYEHFGGANEQYLNHAKSVKFNLSDPKNPDFRSKVIFGDIDAEEIPKLSSGQMAG 216
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D R++ +E +F D YK + ++ + NLKD KNP+ RRNV G + P+ I M
Sbjct: 163 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPELRRNVLCGTITPQQIAVM 222
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 223 TSEEMASDEL 232
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E A+F++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+EMA D
Sbjct: 175 IEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASD 234
Query: 210 KM 211
++
Sbjct: 235 EL 236
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R RE +C+AL +G+ E + +AI LE A++ ++ D YK +
Sbjct: 164 DAVRLKCREMLCNALK--TGDIPE------GWPEPEEMAIELEEAIYAEFRNTDMKYKNR 215
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ + NLKDPKNP R N G + + + MT +EMA D+M
Sbjct: 216 VRSRVANLKDPKNPTLRGNFMCGAITAQQLAKMTPEEMASDEM 258
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + +A+++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 164 VRDKCVEMLS-AALKAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 220
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 221 NLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDEL 257
>gi|114620135|ref|XP_001151569.1| PREDICTED: transcription elongation factor A protein 1 isoform 3
[Pan troglodytes]
gi|397505491|ref|XP_003823294.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Pan paniscus]
gi|410212654|gb|JAA03546.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251520|gb|JAA13727.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298810|gb|JAA28005.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341537|gb|JAA39715.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 280
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 43/216 (19%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K I P E
Sbjct: 34 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSP-----------EA 82
Query: 58 CQEISGVGIVKVQKVDQNA--TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVV 115
+E + G V +K + NA T +SS P ++SD++ ++C RE++
Sbjct: 83 REESTSSGNVSNRKDETNARDTYVSSFPRAP--------STSDSVR---LKC----REML 127
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
+ ++ ADEE + +E A++++ D YK + ++ + N
Sbjct: 128 AAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEMRNTDMKYKNRVRSRISN 176
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
LKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 177 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 212
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 53/221 (23%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K EPA + + S E
Sbjct: 55 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKK--------EPA----ITSQNSPE 102
Query: 58 CQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC---NDCFREV 114
+E S + S NV S ++TN+ D S R +D R
Sbjct: 103 AREES---------------TSSGNV----SNRKDETNARDTYVSSFPRAPSTSDSVRLK 143
Query: 115 VREKVCDALSK----VSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
RE + AL ++ ADEE + +E A++++ D YK + +
Sbjct: 144 CREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEMRNTDMKYKNRVR 192
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 193 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 233
>gi|410959484|ref|XP_003986338.1| PREDICTED: PHD finger protein 3 [Felis catus]
Length = 2211
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K E++ ++ +E A +VA +E +F + D YK K
Sbjct: 1099 DQIRQSVRHSLKDILMKRLTESNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 1154
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 1155 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1202
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 43/216 (19%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K I P E
Sbjct: 55 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSP-----------EA 103
Query: 58 CQEISGVGIVKVQKVDQNA--TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVV 115
+E + G V +K ++NA T +SS P ++SD++ ++C RE++
Sbjct: 104 REESTSSGNVSNRKDERNARDTYVSSFPRAP--------STSDSVR---LKC----REML 148
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
+ ++ ADEE + +E A++++ D YK + ++ + N
Sbjct: 149 AAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISN 197
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
LKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 198 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 233
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
D + +E A+F++ D YK + ++ + NLKD KNP+ R+NV G + P+
Sbjct: 165 GADEEELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDTKNPNLRKNVLCGNILPDRFA 224
Query: 200 GMTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 225 KMTAEEMASDEL 236
>gi|119607146|gb|EAW86740.1| transcription elongation factor A (SII), 1, isoform CRA_b [Homo
sapiens]
Length = 260
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 43/216 (19%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K I P E
Sbjct: 14 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSP-----------EA 62
Query: 58 CQEISGVGIVKVQKVDQNA--TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVV 115
+E + G V +K + NA T +SS P ++SD++ ++C RE++
Sbjct: 63 REESTSSGNVSNRKDETNARDTYVSSFPRAP--------STSDSVR---LKC----REML 107
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
+ ++ ADEE + +E A++++ D YK + ++ + N
Sbjct: 108 AAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISN 156
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
LKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 157 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 192
>gi|256071836|ref|XP_002572244.1| transcription elongation factor s-II [Schistosoma mansoni]
gi|360043833|emb|CCD81379.1| putative transcription elongation factor s-II [Schistosoma mansoni]
Length = 318
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
A +S +AI +ES++++ ++ D YK + + + NL+D NP+ R NV +G V P+ +
Sbjct: 179 AYESEFLAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLA 238
Query: 200 GMTAKEMAGDKM 211
MT++EMA +M
Sbjct: 239 SMTSEEMASKEM 250
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 53/221 (23%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K EPA + + S E
Sbjct: 34 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKK--------EPA----ITSQNSPE 81
Query: 58 CQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC---NDCFREV 114
+E S + S NV S ++TN+ D S R +D R
Sbjct: 82 AREES---------------TSSGNV----SNRKDETNARDTYVSSFPRAPSTSDSVRLK 122
Query: 115 VREKVCDALSK----VSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
RE + AL ++ ADEE + +E A++++ D YK + +
Sbjct: 123 CREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVR 171
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 172 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 212
>gi|208968915|dbj|BAG74296.1| Transcription elongation factor A protein 1 [synthetic construct]
Length = 284
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 43/216 (19%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K I P E
Sbjct: 38 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSP-----------EA 86
Query: 58 CQEISGVGIVKVQKVDQNA--TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVV 115
+E + G V +K + NA T +SS P ++SD++ ++C RE++
Sbjct: 87 REESTSSGNVSNRKDETNARDTYVSSFPRAP--------STSDSVQ---LKC----REML 131
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
+ ++ ADEE + +E A++++ D YK + ++ + N
Sbjct: 132 AAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISN 180
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
LKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 181 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 216
>gi|157817961|ref|NP_001102261.1| PHD finger protein 3 [Rattus norvegicus]
gi|149046439|gb|EDL99332.1| PHD finger protein 3 (predicted) [Rattus norvegicus]
Length = 2020
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ +I +E S +VA +E +F + D YK K
Sbjct: 908 DQIRQSVRHSLKDILMKRLTDSNLKIPEE----KSAKVATKIEKELFSFFRDTDAKYKNK 963
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 964 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1011
>gi|359318997|ref|XP_003638964.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Canis lupus familiaris]
Length = 1183
Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V A+ +V +E+ D V + ++V +A +E+A+F YK KY+++L
Sbjct: 561 VRNTVVHAMQEVLRSRLQELPDLVLSEEAVEGIAAGIETALFNLTQTTSCRYKTKYRSLL 620
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQ 216
NL+DP+NPD V G V PE +V M++ ++A + L+C++
Sbjct: 621 FNLRDPRNPDLFLKVVRGDVTPEDLVQMSSIQLAPQE-LACWR 662
>gi|332862535|ref|XP_003317935.1| PREDICTED: PHD finger protein 3 isoform 1 [Pan troglodytes]
gi|410216400|gb|JAA05419.1| PHD finger protein 3 [Pan troglodytes]
gi|410258332|gb|JAA17133.1| PHD finger protein 3 [Pan troglodytes]
gi|410301720|gb|JAA29460.1| PHD finger protein 3 [Pan troglodytes]
gi|410354663|gb|JAA43935.1| PHD finger protein 3 [Pan troglodytes]
Length = 2039
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ +I +E A +VA +E +F + D YK K
Sbjct: 925 DQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 980
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 981 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1028
>gi|149024308|gb|EDL80805.1| transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 299
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 87 ESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDEVNACDSV 144
E+ T + S+ + ++ C+ + VR+K + LS + +A+++ +D CD
Sbjct: 157 ETPKTPSSPSTPTFAPAVCLLASCYLTGDSVRDKCVEMLS-AALKAEDDFKDYGVNCD-- 213
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
++A +E+ ++++ D Y+ + ++ + NLKDP+NP RRNV G + PE I MTA
Sbjct: 214 KLASEIETHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGTISPELIAKMTA 272
>gi|73973196|ref|XP_538985.2| PREDICTED: PHD finger protein 3 isoform 1 [Canis lupus familiaris]
Length = 2043
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L + E++ ++ +E A +VA +E +F + D YK K
Sbjct: 927 DQIRQSVRHSLKDILMRRLTESNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 982
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 983 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1030
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 53/221 (23%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K EPA + + S E
Sbjct: 55 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKK--------EPA----ITSQNSPE 102
Query: 58 CQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC---NDCFREV 114
+E S + S NV S ++TN+ D S R +D R
Sbjct: 103 AREES---------------TSSGNV----SNRKDETNARDTYVSSFPRAPSTSDSVRLK 143
Query: 115 VREKVCDALSK----VSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
RE + AL ++ ADEE + +E A++++ D YK + +
Sbjct: 144 CREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVR 192
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 193 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 233
>gi|332862537|ref|XP_003317936.1| PREDICTED: PHD finger protein 3 isoform 2 [Pan troglodytes]
Length = 1951
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ +I +E A +VA +E +F + D YK K
Sbjct: 837 DQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 892
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 893 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 940
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 53/221 (23%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K EPA + + S E
Sbjct: 55 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKK--------EPA----ITSQNSPE 102
Query: 58 CQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC---NDCFREV 114
+E S + S NV S ++TN+ D S R +D R
Sbjct: 103 AREES---------------TSSGNV----SNRKDETNARDTYVSSFPRAPSTSDSVRLK 143
Query: 115 VREKVCDALSK----VSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
RE + AL ++ ADEE + +E A++++ D YK + +
Sbjct: 144 CREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVR 192
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 193 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 233
>gi|221042038|dbj|BAH12696.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 43/216 (19%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K I P E
Sbjct: 34 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSP-----------EA 82
Query: 58 CQEISGVGIVKVQKVDQNA--TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVV 115
+E + G V +K + NA T +SS P ++SD++ ++C RE++
Sbjct: 83 REESTSSGNVSNRKDETNARDTYVSSFPRAP--------STSDSVR---LKC----REML 127
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
+ ++ ADEE + +E A++++ D YK + ++ + N
Sbjct: 128 AAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISN 176
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
LKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 177 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 212
>gi|397521935|ref|XP_003831038.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pan
paniscus]
Length = 2054
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ +I +E A +VA +E +F + D YK K
Sbjct: 940 DQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 995
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 996 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1043
>gi|45439355|ref|NP_958845.1| transcription elongation factor A protein 1 isoform 2 [Homo
sapiens]
gi|332213783|ref|XP_003256010.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Nomascus leucogenys]
gi|426359605|ref|XP_004047058.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|37072|emb|CAA40484.1| transcription elongation factor [Homo sapiens]
Length = 280
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 43/216 (19%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K I P E
Sbjct: 34 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSP-----------EA 82
Query: 58 CQEISGVGIVKVQKVDQNA--TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVV 115
+E + G V +K + NA T +SS P ++SD++ ++C RE++
Sbjct: 83 REESTSSGNVSNRKDETNARDTYVSSFPRAP--------STSDSVR---LKC----REML 127
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
+ ++ ADEE + +E A++++ D YK + ++ + N
Sbjct: 128 AAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISN 176
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
LKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 177 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 212
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 53/221 (23%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K EPA + + S E
Sbjct: 55 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKK--------EPA----ITSQNSPE 102
Query: 58 CQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC---NDCFREV 114
+E S + S NV S ++TN+ D S R +D R
Sbjct: 103 AREES---------------TSSGNV----SNRKDETNARDTYVSSFPRAPSTSDSVRLK 143
Query: 115 VREKVCDALSK----VSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
RE + AL ++ ADEE + +E A++++ D YK + +
Sbjct: 144 CREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVR 192
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 193 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 233
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 53/221 (23%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K EPA + + S E
Sbjct: 41 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKK--------EPA----ITSQNSPE 88
Query: 58 CQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC---NDCFREV 114
+E S + S NV S ++TN+ D S R +D R
Sbjct: 89 AREES---------------TSSGNV----SNRKDETNARDTYVSSFPRAPSTSDSVRLK 129
Query: 115 VREKVCDALSK----VSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
RE + AL ++ ADEE + +E A++++ D YK + +
Sbjct: 130 CREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVR 178
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 179 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 219
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 43/216 (19%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K I P E
Sbjct: 77 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSP-----------EA 125
Query: 58 CQEISGVGIVKVQKVDQNA--TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVV 115
+E + G V +K ++NA T +SS P ++SD++ ++C RE++
Sbjct: 126 REESTSSGNVSNRKDERNARDTYVSSFPRAP--------STSDSVR---LKC----REML 170
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
+ ++ ADEE + +E A++++ D YK + ++ + N
Sbjct: 171 AAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISN 219
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
LKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 220 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 255
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 53/221 (23%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K EPA + + S E
Sbjct: 55 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKK--------EPA----ITSQNSPE 102
Query: 58 CQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC---NDCFREV 114
+E S + S NV S ++TN+ D S R +D R
Sbjct: 103 AREES---------------TSSGNV----SNRKDETNARDTYVSSFPRAPSTSDSVRLK 143
Query: 115 VREKVCDALSK----VSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
RE + AL ++ ADEE + +E A++++ D YK + +
Sbjct: 144 CREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVR 192
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 193 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 233
>gi|410929091|ref|XP_003977933.1| PREDICTED: transcription elongation factor A protein 2-like
[Takifugu rubripes]
Length = 284
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E +++++ + YK + ++ + NLKD KNP+ RRNV G + P+ I M
Sbjct: 164 DCQHLAAQIEEEIYQEFKSTETKYKSRLRSRISNLKDQKNPELRRNVLCGNISPQRIASM 223
Query: 202 TAKEMAGDKM 211
+A+EMA ++
Sbjct: 224 SAEEMASAEL 233
>gi|449497988|ref|XP_004176896.1| PREDICTED: PHD finger protein 3 isoform 2 [Taeniopygia guttata]
Length = 2069
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 32 RKGSYT--IPGDIEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESV 89
RKGS T IP K EK+ K + + + G+ + Q++ + S
Sbjct: 872 RKGSQTAAIPRRSPEDKNEKISKESLSTVERSTKSGVHEKQEIKKKKNEKGSISATHLPA 931
Query: 90 VTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 149
V S+D + +S+ + +E++ +++ D+ K+ E + +VA
Sbjct: 932 VPASKPSADQIRQSVKQS---LKEILMKRLTDSSLKIPEER------------AAKVATR 976
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + D YK KY++++ NLKDPKN + V G+V P+ ++ M+ +E+A
Sbjct: 977 IERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASK 1036
Query: 210 KMLSCYQR 217
++ + QR
Sbjct: 1037 ELAAWRQR 1044
>gi|3347836|gb|AAC64680.1| transcription elongation factor S-II [Xenopus laevis]
Length = 121
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
D Y+ + ++ + NLKDPKNP+ R+NV G V P++I MTA+EMA D++
Sbjct: 4 DMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDEL 53
>gi|449497986|ref|XP_002192240.2| PREDICTED: PHD finger protein 3 isoform 1 [Taeniopygia guttata]
Length = 2086
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 32 RKGSYT--IPGDIEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESV 89
RKGS T IP K EK+ K + + + G+ + Q++ + S
Sbjct: 889 RKGSQTAAIPRRSPEDKNEKISKESLSTVERSTKSGVHEKQEIKKKKNEKGSISATHLPA 948
Query: 90 VTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 149
V S+D + +S+ + +E++ +++ D+ K+ E + +VA
Sbjct: 949 VPASKPSADQIRQSVKQS---LKEILMKRLTDSSLKIPEER------------AAKVATR 993
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + D YK KY++++ NLKDPKN + V G+V P+ ++ M+ +E+A
Sbjct: 994 IERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASK 1053
Query: 210 KMLSCYQR 217
++ + QR
Sbjct: 1054 ELAAWRQR 1061
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 80 SSNVVRPESVVTEKTNSSDNLSRSMIRCNDCF--REVVREKVCDALSKVSGEADEEIRDE 137
S +PE + + ++ + S+ C+ + VR+K + +S D+
Sbjct: 150 SDGKAKPEGPKSPTSPTTPTFASSVCFLPPCYLTGDSVRDKCIEMISAALKMDDDYKEFG 209
Query: 138 VNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPET 197
VN CD ++A +E ++++ D Y+ + ++ + NLKDPKNP RRNV G +
Sbjct: 210 VN-CD--KMAAEIEDHIYQELKGTDMKYRNRVRSRISNLKDPKNPGLRRNVLCGAISAGR 266
Query: 198 IVGMTAKEMAGDKM 211
I MTA+EMA D++
Sbjct: 267 IAKMTAEEMASDEL 280
>gi|54304003|emb|CAH59746.1| transcription elongation factor A protein 2 (SII) [Homo sapiens]
Length = 86
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F D YK + ++ + NLKD KNPD RRNV G + P+ I MT++EMA D
Sbjct: 3 IEECIFRGVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASD 62
Query: 210 KM 211
++
Sbjct: 63 EL 64
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 80 SSNVVRPESVVTEKTNSSDNLSRSMIRCNDCF--REVVREKVCDALSKVSGEADEEIRDE 137
+S+ + ES T + + + S+ C+ + VR+K + LS + +A+++ +D
Sbjct: 294 NSSTSKAESPKTPGSPLTPTFAPSVCLLAPCYLTGDSVRDKCVEMLS-AALKAEDDYKDY 352
Query: 138 VNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPET 197
CD ++A +E ++++ D Y+ + ++ + NLKDP+NP RRNV G +
Sbjct: 353 GVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGTISAGL 410
Query: 198 IVGMTAKEMAGDKM 211
I MTA+EMA D++
Sbjct: 411 IAKMTAEEMASDEL 424
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + L+ + +A+++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 192 VRDKCVEMLA-AALKAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 248
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 249 NLKDPRNPGLRRNVLSGAISSGLIAKMTAEEMASDEL 285
>gi|449497990|ref|XP_004176897.1| PREDICTED: PHD finger protein 3 isoform 3 [Taeniopygia guttata]
gi|449497992|ref|XP_004176898.1| PREDICTED: PHD finger protein 3 isoform 4 [Taeniopygia guttata]
Length = 1981
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 32 RKGSYT--IPGDIEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESV 89
RKGS T IP K EK+ K + + + G+ + Q++ + S
Sbjct: 784 RKGSQTAAIPRRSPEDKNEKISKESLSTVERSTKSGVHEKQEIKKKKNEKGSISATHLPA 843
Query: 90 VTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 149
V S+D + +S+ + +E++ +++ D+ K+ E + +VA
Sbjct: 844 VPASKPSADQIRQSVKQS---LKEILMKRLTDSSLKIPEER------------AAKVATR 888
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + D YK KY++++ NLKDPKN + V G+V P+ ++ M+ +E+A
Sbjct: 889 IERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASK 948
Query: 210 KMLSCYQR 217
++ + QR
Sbjct: 949 ELAAWRQR 956
>gi|344264752|ref|XP_003404454.1| PREDICTED: PHD finger protein 3 [Loxodonta africana]
Length = 2047
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 928 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 983
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 984 YRSLMFNLKDPKNSILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1031
>gi|349802183|gb|AEQ16564.1| putative transcription elongation factor a protein 1 [Pipa
carvalhoi]
Length = 208
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
D + +E A+F+++ D YK + ++ + NLKD KNP+ RRNV G + +
Sbjct: 79 GADDEELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDAKNPNLRRNVLCGNIATDRFA 138
Query: 200 GMTAKEMAGDKM 211
M+A+EMA D++
Sbjct: 139 RMSAEEMASDEL 150
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I MT++E
Sbjct: 175 LSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEE 234
Query: 206 MAGDKM 211
MA D++
Sbjct: 235 MASDEL 240
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
L +F++ D Y+ + ++ + NLKDPKNP+ RRNV G + P I MTA+EMA D
Sbjct: 272 LAPHIFQELKSTDMKYRNRVRSRISNLKDPKNPNLRRNVLCGAIAPALIARMTAEEMASD 331
Query: 210 KM 211
++
Sbjct: 332 EL 333
>gi|281350870|gb|EFB26454.1| hypothetical protein PANDA_015611 [Ailuropoda melanoleuca]
Length = 2043
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 928 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 983
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 984 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1031
>gi|291391945|ref|XP_002712401.1| PREDICTED: transcription elongation factor A 1 isoform 2
[Oryctolagus cuniculus]
Length = 279
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 2 KASSRKKIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEI 61
K S+ +++ A LI SW+ + G T E K + + S E +E
Sbjct: 34 KQSTDEEVTSLAKSLIKSWKKL--------LDGPSTEKDPEEKKKEPAITSQNSPEAREE 85
Query: 62 SGVGIVKVQKVDQNA--TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKV 119
S G V +K + NA T +SS P ++SD++ ++C RE++ +
Sbjct: 86 SSSGNVSNRKDETNARDTYVSSFPRAP--------STSDSVR---LKC----REMLAAAL 130
Query: 120 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDP 179
V+ ADEE + +E A++++ D YK + ++ + NLKD
Sbjct: 131 RTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDA 179
Query: 180 KNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 180 KNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 211
>gi|159164218|pdb|2DME|A Chain A, Solution Structure Of The Tfiis Domain Ii Of Human Phd
Finger Protein 3
Length = 120
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 10 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 65
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 66 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 113
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 2 KASSRKKIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEI 61
K S+ +++ A LI SW+ + G T E K + + S E +E
Sbjct: 55 KQSTDEEVTSLAKSLIKSWKKL--------LDGPSTEKDPEEKKKEPAITSQNSPEAREE 106
Query: 62 SGVGIVKVQKVDQNA--TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKV 119
S G V +K + NA T +SS P ++SD++ ++C RE++ +
Sbjct: 107 SSSGNVSNRKDETNARDTYVSSFPRAP--------STSDSVR---LKC----REMLAAAL 151
Query: 120 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDP 179
V+ ADEE + +E A++++ D YK + ++ + NLKD
Sbjct: 152 RTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDA 200
Query: 180 KNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 201 KNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 232
>gi|301781204|ref|XP_002926018.1| PREDICTED: PHD finger protein 3-like [Ailuropoda melanoleuca]
Length = 2074
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 959 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 1014
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 1015 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1062
>gi|45549559|ref|NP_573049.2| CG8117 [Drosophila melanogaster]
gi|45446964|gb|AAF48482.2| CG8117 [Drosophila melanogaster]
gi|66571116|gb|AAY51523.1| IP08861p [Drosophila melanogaster]
gi|66772509|gb|AAY55566.1| IP09061p [Drosophila melanogaster]
gi|220943416|gb|ACL84251.1| CG8117-PA [synthetic construct]
gi|220953346|gb|ACL89216.1| CG8117-PA [synthetic construct]
Length = 162
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A LE A++ + YK + ++ L NL+DPKNP+ R+ LGQ+ PE + MT +E
Sbjct: 32 MAAKLEDAIYGDLNGCKVKYKNRIRSRLANLRDPKNPELRQKFLLGQITPEELSKMTPEE 91
Query: 206 MAGDKM 211
MA D M
Sbjct: 92 MASDDM 97
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 141 CDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
CD + I E +F+++ D YK + ++ + NLKD KNP+ RR V G V PE +
Sbjct: 174 CDELGAQI--EEVIFQEFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAK 231
Query: 201 MTAKEMAGDKM 211
M+A+EMA D++
Sbjct: 232 MSAEEMASDEL 242
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
+R+K + L+ + D++ +D C+++ I E ++++ D YK + ++ +
Sbjct: 248 IRDKCIEMLT-AALRTDDDYKDYGTNCEAMGAEI--EDYIYQETKATDMKYKNRVRSRIS 304
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDPKNP+ R+NV G ++ I MTA+EMA D++
Sbjct: 305 NLKDPKNPNLRKNVLAGAIELSRIASMTAEEMASDEL 341
>gi|431838241|gb|ELK00173.1| PHD finger protein 3 [Pteropus alecto]
Length = 2121
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 991 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 1046
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 1047 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1094
>gi|301619923|ref|XP_002939342.1| PREDICTED: hypothetical protein LOC100497807 [Xenopus (Silurana)
tropicalis]
Length = 392
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 113 EVVREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKA 171
E VR ALS V + +E D +V + A +E +F + D YK KY++
Sbjct: 227 ENVRTTTVQALSDVLLKRVKEAPDLDVQEETLLNAAKNIEQEIFALFYHTDARYKKKYRS 286
Query: 172 VLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+L NLKDP N R + LG++ P+ + +++ EMAGD++
Sbjct: 287 ILFNLKDPNNKVLFRRLVLGEITPQHLASLSSTEMAGDEL 326
>gi|395737392|ref|XP_002817084.2| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pongo
abelii]
Length = 2061
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 940 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 995
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 996 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1043
>gi|198419645|ref|XP_002120544.1| PREDICTED: similar to transcription elongation factor A (SII) 1
[Ciona intestinalis]
Length = 298
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 79 LSSNVVRPESVVTEKTNSSDNLSRSMIR-CNDCFREVVREKVCDALS--KVSGEADEEIR 135
+S+N+ + + E + SS + S ++ + R+ RE + L SG +D++
Sbjct: 104 ISTNIRKTSTTKMEVSASSHTMDTSSLQSTGNSVRDKCREMLVRGLQTDNTSGHSDQQC- 162
Query: 136 DEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKP 195
+A A+E A++ ++ YK + ++ NLKD +N R NV G +KP
Sbjct: 163 --------AFLAAAIEEAIYSEFKDTGVKYKNRIRSRFSNLKDTRNSILRLNVLNGILKP 214
Query: 196 ETIVGMTAKEMAGDKM 211
E I MTA+EMA D+M
Sbjct: 215 EQIAKMTAEEMASDEM 230
>gi|20521870|dbj|BAA13438.2| KIAA0244 [Homo sapiens]
Length = 2044
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 930 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 985
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 986 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1033
>gi|7662018|ref|NP_055968.1| PHD finger protein 3 [Homo sapiens]
gi|34098662|sp|Q92576.3|PHF3_HUMAN RecName: Full=PHD finger protein 3
gi|6648928|gb|AAF21292.1|AF091622_1 PHD finger protein 3 [Homo sapiens]
gi|109731109|gb|AAI13651.1| PHD finger protein 3 [Homo sapiens]
gi|109731774|gb|AAI13653.1| PHD finger protein 3 [Homo sapiens]
gi|119608902|gb|EAW88496.1| PHD finger protein 3 [Homo sapiens]
gi|126540985|emb|CAM45842.1| PHD finger protein 3 [Homo sapiens]
gi|168278551|dbj|BAG11155.1| PHD finger protein 3 [synthetic construct]
Length = 2039
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 925 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 980
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 981 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1028
>gi|60219226|emb|CAI56715.1| hypothetical protein [Homo sapiens]
Length = 1951
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 837 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 892
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 893 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 940
>gi|417406878|gb|JAA50079.1| Putative transcription factor datf1 [Desmodus rotundus]
Length = 2045
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 930 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 985
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 986 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1033
>gi|432112838|gb|ELK35434.1| PHD finger protein 3 [Myotis davidii]
Length = 2033
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 925 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 980
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 981 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1028
>gi|355711246|gb|AES03948.1| PHD finger protein 3 [Mustela putorius furo]
Length = 1987
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 873 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 928
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 929 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 976
>gi|194391306|dbj|BAG60771.1| unnamed protein product [Homo sapiens]
Length = 861
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 194 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 249
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 250 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 297
>gi|351711851|gb|EHB14770.1| PHD finger protein 3 [Heterocephalus glaber]
Length = 2028
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 914 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 969
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 970 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELAS-KELAAWRR 1017
>gi|297291110|ref|XP_001106919.2| PREDICTED: PHD finger protein 3 [Macaca mulatta]
Length = 2037
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 927 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 982
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 983 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1030
>gi|148682474|gb|EDL14421.1| mCG4035 [Mus musculus]
Length = 2020
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ +I +E A +VA +E +F + D YK K
Sbjct: 904 DQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 959
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 960 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1007
>gi|124487309|ref|NP_001074549.1| PHD finger protein 3 [Mus musculus]
gi|187953739|gb|AAI37914.1| PHD finger protein 3 [Mus musculus]
Length = 2025
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ +I +E A +VA +E +F + D YK K
Sbjct: 904 DQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 959
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 960 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1007
>gi|28972117|dbj|BAC65512.1| mKIAA0244 protein [Mus musculus]
Length = 1184
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ +I +E A +VA +E +F + D YK K
Sbjct: 63 DQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 118
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 119 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 166
>gi|26337609|dbj|BAC32490.1| unnamed protein product [Mus musculus]
Length = 371
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ +I +E A +VA +E +F + D YK K
Sbjct: 195 DQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 250
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 251 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 298
>gi|426353656|ref|XP_004044303.1| PREDICTED: PHD finger protein 3-like [Gorilla gorilla gorilla]
Length = 1309
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 194 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 249
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 250 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 297
>gi|355561823|gb|EHH18455.1| hypothetical protein EGK_15055 [Macaca mulatta]
Length = 2040
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1029
>gi|126303931|ref|XP_001375763.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 1 CKASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSE 56
CK S+ +++ A LI SW+ + S ++ DE+K I P E
Sbjct: 33 CKQSTNEEVTSLAKSLIKSWKKLLDGPSTDKDSDEKKKEPAISSQNSP-----------E 81
Query: 57 ECQEISGVGIVKVQKVDQNAT-SLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVV 115
+E S +K + NA+ S + R S +SD++ +RC +
Sbjct: 82 AKEESSSSSNGSNRKEETNASDSFIPSFPRAPS-------TSDSVP---MRCRGMLAAAL 131
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
R ++ ADEE + +E A++++ D YK + ++ + N
Sbjct: 132 R----TGDDYIAIGADEE-----------ELGSQIEEAIYQELRNTDMKYKNRVRSRIAN 176
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
LKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 177 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 212
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F D YK + ++ + NLKD KNPD RRNV G + P+ I MT++EMA D
Sbjct: 145 IEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASD 204
Query: 210 KM 211
++
Sbjct: 205 EL 206
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 80 SSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDE 137
+S+ + ES T + + + S+ C+ + VR+K + LS + +A+++ +D
Sbjct: 127 NSSTSKAESPKTPGSPLTPTFAPSVCLLAPCYLTGDSVRDKCVEMLS-AALKAEDDYKDY 185
Query: 138 VNACDSVRVAIA-----LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQ 192
CD + I L S ++++ D Y+ + ++ + NLKDP+NP RRNV G
Sbjct: 186 GVNCDKMASEIEDHILELRSHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGT 245
Query: 193 VKPETIVGMTAKEMAGDKM 211
+ I MTA+EMA D++
Sbjct: 246 ISAGLIAKMTAEEMASDEL 264
>gi|456753196|gb|JAA74119.1| PHD finger protein 3 [Sus scrofa]
Length = 2032
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 918 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 973
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 974 YRSLMFNLKDPKNNILFKKVLRGEVTPDHLIRMSPEELAS-KELAAWRR 1021
>gi|332253853|ref|XP_003276047.1| PREDICTED: PHD finger protein 3, partial [Nomascus leucogenys]
Length = 1807
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 691 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 746
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 747 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 794
>gi|355762974|gb|EHH62098.1| hypothetical protein EGM_20299 [Macaca fascicularis]
Length = 2040
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1029
>gi|383417063|gb|AFH31745.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1029
>gi|380811170|gb|AFE77460.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1029
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE
Sbjct: 118 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE----------- 166
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 227 EMASDEL 233
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 141 CDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
CD + I E +F+ + D YK + ++ + NLKD KNP+ RR V G + PE +
Sbjct: 175 CDELGAQI--EDFIFQVFKNTDMKYKNRVRSRISNLKDVKNPNLRRTVLCGSITPERMAK 232
Query: 201 MTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 233 MTAEEMASDEL 243
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS V+ +A+++ ++ CD ++A +E ++++ D Y+ + ++ +
Sbjct: 182 VRDKCVEMLS-VALKAEDDYKNYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 238
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKD KNP RRNV G + E I M A+EMA D++
Sbjct: 239 NLKDSKNPGLRRNVLSGAISTELIAKMMAEEMASDEL 275
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 1 CKASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSE 56
CK S+ +++ A LI SW+ + S ++ DE+K I P E
Sbjct: 54 CKQSTNEEVTSLAKSLIKSWKKLLDGPSTDKDSDEKKKEPAISSQNSP-----------E 102
Query: 57 ECQEISGVGIVKVQKVDQNAT-SLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVV 115
+E S +K + NA+ S + R S +SD++ +RC +
Sbjct: 103 AKEESSSSSNGSNRKEETNASDSFIPSFPRAPS-------TSDSVP---MRCRGMLAAAL 152
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
R ++ ADEE + +E A++++ D YK + ++ + N
Sbjct: 153 R----TGDDYIAIGADEE-----------ELGSQIEEAIYQELRNTDMKYKNRVRSRIAN 197
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
LKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 198 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 233
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK-----VSGEADEEIRDEVNACDS 143
E SSD+ S R +D R RE + AL G DEE+ ++
Sbjct: 108 EANASSDSFIPSFPRAPSTSDSVRVKCREMLAAALKTGDDYIAIGADDEELGSQI----- 162
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA
Sbjct: 163 -------EEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTA 215
Query: 204 KEMAGDKM 211
+EMA D++
Sbjct: 216 EEMASDEL 223
>gi|402867376|ref|XP_003897831.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3 [Papio anubis]
Length = 2165
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 1051 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 1106
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 1107 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1154
>gi|334324097|ref|XP_001372425.2| PREDICTED: PHD finger protein 3 [Monodelphis domestica]
Length = 2036
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ V+ + D L K +++ +I +E A +VA +E +F + D YK K
Sbjct: 924 DQIRQSVKHSLKDILMKRLTDSNLKIPEERAA----KVATKIEKELFSFFRDTDAKYKNK 979
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 980 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1027
>gi|300796758|ref|NP_001179500.1| PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 917 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 972
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1020
>gi|296484308|tpg|DAA26423.1| TPA: PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 917 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 972
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1020
>gi|440911148|gb|ELR60861.1| PHD finger protein 3, partial [Bos grunniens mutus]
Length = 1943
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 836 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 891
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 892 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 939
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE
Sbjct: 118 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE----------- 166
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 227 EMASDEL 233
>gi|426235316|ref|XP_004011630.1| PREDICTED: PHD finger protein 3 isoform 1 [Ovis aries]
Length = 2027
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 917 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 972
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1020
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE
Sbjct: 118 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE----------- 166
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 227 EMASDEL 233
>gi|432094021|gb|ELK25813.1| Transcription elongation factor A protein 2 [Myotis davidii]
Length = 131
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+ + +F D YK + ++ + NLKD KNPD RRNV G + P+ I MT++EMA D
Sbjct: 1 MPARIFRDVGNTDMKYKNRVRSRIANLKDAKNPDLRRNVLCGTITPQQIAVMTSEEMASD 60
Query: 210 KM 211
++
Sbjct: 61 EL 62
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE
Sbjct: 129 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE----------- 177
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 178 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 237
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 238 EMASDEL 244
>gi|426235318|ref|XP_004011631.1| PREDICTED: PHD finger protein 3 isoform 2 [Ovis aries]
Length = 1939
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 829 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 884
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 885 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 932
>gi|344272860|ref|XP_003408247.1| PREDICTED: transcription elongation factor A protein 1-like
[Loxodonta africana]
Length = 380
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL ++ ADEE
Sbjct: 132 DETNTRDTYVSSFPRAPNTSDSVRLKCREMIAAALRTGDDYIAIGADEE----------- 180
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 181 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 240
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 241 EMASDEL 247
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE
Sbjct: 118 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE----------- 166
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 227 EMASDEL 233
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
D + +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 200 GMTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 222 RMTAEEMASDEL 233
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE
Sbjct: 118 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE----------- 166
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 227 EMASDEL 233
>gi|395833391|ref|XP_003789720.1| PREDICTED: PHD finger protein 3 isoform 2 [Otolemur garnettii]
Length = 1953
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 28/170 (16%)
Query: 48 EKVDKRTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC 107
EK K + E QE+ K +KVD+ S V P + K S+D + +S+
Sbjct: 802 EKSSKSGTHEKQEM------KKKKVDKGVPS-----VHPPAAPASKP-STDQIRQSV--- 846
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
+E++ +++ D+ KV E + +VA +E +F + D YK
Sbjct: 847 RHSLKEILMKRLTDSNLKVPEEK------------AAKVATKIEKELFSFFRDTDAKYKN 894
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
KY++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 895 KYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 943
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE
Sbjct: 117 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE----------- 165
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 166 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 225
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 226 EMASDEL 232
>gi|17136888|ref|NP_476967.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|442627872|ref|NP_001260457.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
gi|135660|sp|P20232.1|TFS2_DROME RecName: Full=Transcription elongation factor S-II; AltName:
Full=RNA polymerase II elongation factor DMS-II;
AltName: Full=TFIIS
gi|7921|emb|CAA37710.1| unnamed protein product [Drosophila melanogaster]
gi|6713129|gb|AAA92864.2| transcription elongation factor [Drosophila melanogaster]
gi|7298202|gb|AAF53436.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|15291997|gb|AAK93267.1| LD34766p [Drosophila melanogaster]
gi|220942248|gb|ACL83667.1| TfIIS-PA [synthetic construct]
gi|440213800|gb|AGB92992.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
Length = 313
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A LE A++ +++ D YK + ++ + NLKDPKNP R N G V + + MT +E
Sbjct: 180 MAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEE 239
Query: 206 MAGDKM 211
MA D+M
Sbjct: 240 MASDEM 245
>gi|395833389|ref|XP_003789719.1| PREDICTED: PHD finger protein 3 isoform 1 [Otolemur garnettii]
Length = 2041
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 28/170 (16%)
Query: 48 EKVDKRTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC 107
EK K + E QE+ K +KVD+ S V P + K S+D + +S+
Sbjct: 890 EKSSKSGTHEKQEM------KKKKVDKGVPS-----VHPPAAPASKP-STDQIRQSV--- 934
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
+E++ +++ D+ KV E + +VA +E +F + D YK
Sbjct: 935 RHSLKEILMKRLTDSNLKVPEEK------------AAKVATKIEKELFSFFRDTDAKYKN 982
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
KY++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 983 KYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1031
>gi|201937|gb|AAA40418.1| transcription factor S-II [Mus musculus]
Length = 266
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE
Sbjct: 83 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE----------- 131
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 132 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 191
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 192 EMASDEL 198
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D + +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ M
Sbjct: 164 DEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARM 223
Query: 202 TAKEMAGDKM 211
TA+EMA D++
Sbjct: 224 TAEEMASDEL 233
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
D + +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 200 GMTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 222 RMTAEEMASDEL 233
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE
Sbjct: 132 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE----------- 180
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 181 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 240
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 241 EMASDEL 247
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
++ +E +F D Y+ + ++ + NLKD KNPD RRNV G + P+ I MT++E
Sbjct: 167 LSAQIEECIFRDVGNTDMKYRNRVRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEE 226
Query: 206 MAGDKM 211
MA D++
Sbjct: 227 MASDEL 232
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 43/216 (19%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K I P E
Sbjct: 55 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSP-----------EA 103
Query: 58 CQEISGVGIVKVQKVDQNA--TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVV 115
+E + G V +K + NA T +SS P ++SD++ ++C RE++
Sbjct: 104 REESTSSGNVSNRKDETNARDTYVSSFPRAP--------STSDSVQ---LKC----REML 148
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
+ ++ ADEE + +E A++++ D YK + ++ + N
Sbjct: 149 AAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISN 197
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
LKD KNP R+NV G + P+ MTA+EMA D++
Sbjct: 198 LKDAKNPYLRKNVLCGNIPPDLFARMTAEEMASDEL 233
>gi|291396440|ref|XP_002714452.1| PREDICTED: PHD finger protein 3 [Oryctolagus cuniculus]
Length = 2194
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 28/170 (16%)
Query: 48 EKVDKRTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC 107
EK K + E QEI K +KV++ + V P + T K +++
Sbjct: 1041 EKTSKPGTHEKQEI------KKKKVEKGVAN-----VHPPAATTSKPSANQ--------- 1080
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
R+ VR + D L K +++ ++ +E A +VA +E +F + D YK
Sbjct: 1081 ---IRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKN 1133
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
KY++++ NLKDPKN + V G+V P+ ++ M +E+A K L+ ++R
Sbjct: 1134 KYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMNPEELAS-KELAAWRR 1182
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS +A+++ +D CD ++A +E ++++ D Y+ + ++ +
Sbjct: 392 VRDKCVEMLSAAL-KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 448
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 449 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 485
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR K + LS+ D+ I + CD ++A +E +F ++ D YK + ++ +
Sbjct: 150 VRIKCREMLSQALQAGDDYIAIGAD-CD--QLAAQIEEYIFCEFKNTDPKYKNRVRSRIA 206
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKD KNP+ R++V G V P+ + MTA+EMA D++
Sbjct: 207 NLKDIKNPNLRKSVLCGNVSPDRMAKMTAQEMASDEL 243
>gi|395841854|ref|XP_003793745.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Otolemur garnettii]
Length = 280
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
D + +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+
Sbjct: 141 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 200
Query: 200 GMTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 201 RMTAEEMASDEL 212
>gi|91833|pir||JX0167 transcription elongation factor S-II-related protein L121, hepatic
- mouse
Length = 235
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D + +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ M
Sbjct: 98 DEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARM 157
Query: 202 TAKEMAGDKM 211
TA+EMA D++
Sbjct: 158 TAEEMASDEL 167
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E +++ D YK + ++ + NLKD KNP+ ++NV G + PE I M
Sbjct: 137 DCEHIAAQIEECIYQDIKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVM 196
Query: 202 TAKEMAGDKM 211
T++EMA +++
Sbjct: 197 TSEEMASNEL 206
>gi|220592|dbj|BAA00768.1| unnamed protein product [Mus musculus]
Length = 235
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D + +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ M
Sbjct: 98 DEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARM 157
Query: 202 TAKEMAGDKM 211
TA+EMA D++
Sbjct: 158 TAEEMASDEL 167
>gi|412992662|emb|CCO18642.1| predicted protein [Bathycoccus prasinos]
Length = 331
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
R+ +E AM EKW YK K + + N+KDPKNPD RR + ++ T++ +++
Sbjct: 196 ARIVEEVEDAMSEKWKDLGKEYKAKLRQLAFNMKDPKNPDLRRAIAKREIDATTLIDLSS 255
Query: 204 KEMAGDKMLSCYQ 216
+E+ D+ + Q
Sbjct: 256 EELGSDERRAANQ 268
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
D + +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+
Sbjct: 161 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 220
Query: 200 GMTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 221 RMTAEEMASDEL 232
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
D + +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 200 GMTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 222 RMTAEEMASDEL 233
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
D + +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+
Sbjct: 151 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 210
Query: 200 GMTAKEMAGDKM 211
MTA+EMA D++
Sbjct: 211 RMTAEEMASDEL 222
>gi|195338531|ref|XP_002035878.1| GM14545 [Drosophila sechellia]
gi|194129758|gb|EDW51801.1| GM14545 [Drosophila sechellia]
Length = 311
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A LE A++ +++ D YK + ++ + NLKDPKNP R N G V + + MT +E
Sbjct: 178 MAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLARMTPEE 237
Query: 206 MAGDKM 211
MA D+M
Sbjct: 238 MASDEM 243
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
+R+K + L+ D+ VN CDS+ I E ++++ D YK + ++ +
Sbjct: 359 IRDKCIEMLAAALRTDDDHKEFGVN-CDSMGAEI--EDYIYQEIKATDMKYKNRVRSRIS 415
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDPKNP RRNV G ++ I M+A+EMA D++
Sbjct: 416 NLKDPKNPGLRRNVLAGSIELSRIASMSAEEMASDEL 452
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 53/221 (23%)
Query: 2 KASSRKKIQDFASDLIVSWRNM----SLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEE 57
K S+ +++ A LI SW+ + S E+ DE+K EPA + + S E
Sbjct: 55 KQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKK--------EPA----ITSQNSPE 102
Query: 58 CQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC---NDCFREV 114
+E S + S NV S ++TN+ D S R +D R
Sbjct: 103 AREES---------------TSSGNV----SNRKDETNARDTYVSSFPRAPSTSDSVRLK 143
Query: 115 VREKVCDALSK----VSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
RE + AL ++ ADEE + +E A++++ D YK + +
Sbjct: 144 CREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVR 192
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ + NLKD KNP+ R+NV G + P+ MTA+EM D++
Sbjct: 193 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMPSDEL 233
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D ++ +E +++ D YK + ++ + NLKD KNPD R+NV G + PE I M
Sbjct: 163 DCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVM 222
Query: 202 TAKEMAGDKM 211
T++EMA +++
Sbjct: 223 TSEEMASNEL 232
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F D YK + ++ L NLKD KNP RRNV G + P+ I MT++E
Sbjct: 203 LAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRNVLCGAITPQQIAVMTSEE 262
Query: 206 MAGDKM 211
MA D++
Sbjct: 263 MASDEL 268
>gi|405958419|gb|EKC24549.1| Transcription elongation factor A protein 1 [Crassostrea gigas]
Length = 369
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 120 CDALSKVSGEADEEIRDEV-NACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKD 178
C L S DEE++ + NA +A +E ++ ++ D YK + ++ + NLKD
Sbjct: 137 CRELLASSLVLDEEVKVRIPNAQCPKELAAKIEDSIHLEFKNTDQKYKARIRSRVANLKD 196
Query: 179 PKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KNP + V +G + PE I M+A+EMA D+M
Sbjct: 197 KKNPKLKEGVIMGLIPPERIANMSAEEMASDEM 229
>gi|440804552|gb|ELR25429.1| transcription elongation factor SII, hS-II-T1 isoform 8, putative
[Acanthamoeba castellanii str. Neff]
Length = 188
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 105 IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGP 164
I+ ND R+ E + +AL + +AD +A+ +E+ MF+ + +
Sbjct: 26 IKLNDATRQKCFEMLAEALEQSESDAD-----------YFELALDIEAEMFKLFGETNPN 74
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK K++ + NLK+ KN D R V G + PE + MT++E+A ++
Sbjct: 75 YKAKFRQLFMNLKNVKNHDLRLGVLNGHISPERLCQMTSQELASKEL 121
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE
Sbjct: 118 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE----------- 166
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 227 EMASDEL 233
>gi|332807989|ref|XP_513192.3| PREDICTED: transcription elongation factor A protein 3, partial
[Pan troglodytes]
Length = 295
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 87 ESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDEVNACDSV 144
ES T + + + SM C+ + VR+K + LS + +AD++ +D CD
Sbjct: 157 ESPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLS-AALKADDDYKDYGVNCD-- 213
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
++A +E ++++ D Y+ + ++ + NLKDP+NP RRNV G + I MTA+
Sbjct: 214 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 273
Query: 205 EMAG 208
AG
Sbjct: 274 VRAG 277
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E +++ D YK + ++ + NLKD KNP+ ++NV G + PE I M
Sbjct: 163 DCEHIAAQIEECIYQDVKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVM 222
Query: 202 TAKEMAGDKM 211
T++EMA +++
Sbjct: 223 TSEEMASNEL 232
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E +++ D YK + ++ + NLKD KNP+ ++NV G + PE I M
Sbjct: 163 DCEHIAAQIEECIYQDIKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVM 222
Query: 202 TAKEMAGDKM 211
T++EMA +++
Sbjct: 223 TSEEMASNEL 232
>gi|403268694|ref|XP_003926404.1| PREDICTED: PHD finger protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1951
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E ++ + D YK K
Sbjct: 836 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSFFRDTDAKYKNK 891
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 892 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 939
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL ++ ADEE
Sbjct: 215 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEE----------- 263
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 264 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 323
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 324 EMASDEL 330
>gi|344254454|gb|EGW10558.1| Transcription elongation factor A protein 2 [Cricetulus griseus]
Length = 255
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D ++ +E +F D YK + ++ + NLKD KNP RRNV G + P+ I M
Sbjct: 118 DCEHLSAQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVM 177
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 178 TSEEMASDEL 187
>gi|296198507|ref|XP_002746742.1| PREDICTED: PHD finger protein 3 isoform 1 [Callithrix jacchus]
Length = 2039
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E ++ + D YK K
Sbjct: 924 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSFFRDTDAKYKNK 979
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 980 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1027
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE--KWDRYDGPYKIKYKAV 172
VR+K + LS + +AD++ +D CD ++A +E + E + D Y+ + ++
Sbjct: 165 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHILELGELKSTDMKYRNRVRSR 221
Query: 173 LGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 222 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 260
>gi|403268692|ref|XP_003926403.1| PREDICTED: PHD finger protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 2039
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E ++ + D YK K
Sbjct: 924 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSFFRDTDAKYKNK 979
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 980 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1027
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A LE A++ ++ D YK + ++ + NLKDPKNP R N G V + + MT +E
Sbjct: 182 MAAELEDAIYAEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEE 241
Query: 206 MAGDKM 211
MA D+M
Sbjct: 242 MASDEM 247
>gi|125987179|ref|XP_001357352.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|195155927|ref|XP_002018852.1| GL25727 [Drosophila persimilis]
gi|54645683|gb|EAL34421.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|194115005|gb|EDW37048.1| GL25727 [Drosophila persimilis]
Length = 313
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A LE A++ ++ D YK + ++ + NLKDPKNP R N G V + + MT +E
Sbjct: 180 MAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEE 239
Query: 206 MAGDKM 211
MA D+M
Sbjct: 240 MASDEM 245
>gi|354485811|ref|XP_003505075.1| PREDICTED: PHD finger protein 3-like [Cricetulus griseus]
Length = 2005
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L + +++ ++ +E A +VA +E +F + D YK K
Sbjct: 907 DQIRQSVRHSLKDILMRRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 962
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 963 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1010
>gi|296198509|ref|XP_002746743.1| PREDICTED: PHD finger protein 3 isoform 2 [Callithrix jacchus]
Length = 1951
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E ++ + D YK K
Sbjct: 836 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSFFRDTDAKYKNK 891
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 892 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 939
>gi|395534413|ref|XP_003769236.1| PREDICTED: PHD finger protein 3 [Sarcophilus harrisii]
Length = 2029
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ V+ + D L K +++ +I +E + +VA +E +F + D YK K
Sbjct: 916 DQIRQSVKHSLKDILMKRLTDSNLKIPEER----ASKVATKIEKELFSFFRDTDAKYKNK 971
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 972 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1019
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E +++ D YK + ++ + NLKD KNPD R+NV G + PE I M
Sbjct: 162 DCEEMAAQIEEFIYQDVKNTDLKYKNRVRSRISNLKDSKNPDLRKNVLCGVITPEQIAVM 221
Query: 202 TAKEMAGDKM 211
T++EMA +++
Sbjct: 222 TSEEMASNEL 231
>gi|321466977|gb|EFX77969.1| hypothetical protein DAPPUDRAFT_53771 [Daphnia pulex]
Length = 299
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A LE +++++ D YK + ++ + NLKD +NP+ R N GQV P + MT++E
Sbjct: 166 LAQMLEECIYKEFRNTDMKYKNRVRSRVSNLKDARNPNLRLNFLCGQVSPARLSNMTSEE 225
Query: 206 MAGDKMLSCYQR 217
MA D+M + Q+
Sbjct: 226 MASDEMKNIRQK 237
>gi|346466499|gb|AEO33094.1| hypothetical protein [Amblyomma maculatum]
Length = 313
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 136 DEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKP 195
D + C+ +A +E +++ ++ + YK + ++ + NLKD +NP R NV G + P
Sbjct: 170 DMPDGCNVDGLAAKIEESIYNEFGDTNMKYKNRVRSRVSNLKDSRNPALRLNVLHGAIDP 229
Query: 196 ETIVGMTAKEMAGDKMLSCYQR 217
E I M+A+EMA D+M QR
Sbjct: 230 ERIARMSAEEMASDEMKELRQR 251
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL ++ ADEE
Sbjct: 183 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEE----------- 231
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 232 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 291
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 292 EMASDEL 298
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D ++ +E +++ D YK + ++ + NLKD KNPD R+NV G + PE I M
Sbjct: 164 DCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVM 223
Query: 202 TAKEMAGDKM 211
T++EMA +++
Sbjct: 224 TSEEMASNEL 233
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F + D YK + ++ + NLKD KNPD R+NV G + PE I M+ +E
Sbjct: 159 LAAQIEEVVFRELQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGIITPEQIAIMSCEE 218
Query: 206 MAGDKM 211
MA +++
Sbjct: 219 MASNEL 224
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D ++ +E +F D YK + ++ + NLKD KNP RRNV G + P+ I M
Sbjct: 162 DCEHLSAQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVM 221
Query: 202 TAKEMAGDKM 211
T++EMA D++
Sbjct: 222 TSEEMASDEL 231
>gi|194857365|ref|XP_001968937.1| GG24225 [Drosophila erecta]
gi|190660804|gb|EDV57996.1| GG24225 [Drosophila erecta]
Length = 313
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A LE A++ ++ D YK + ++ + NLKDPKNP R N G V + + MT +E
Sbjct: 180 MAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEE 239
Query: 206 MAGDKM 211
MA D+M
Sbjct: 240 MASDEM 245
>gi|344248661|gb|EGW04765.1| Transcription elongation factor A protein 3 [Cricetulus griseus]
Length = 138
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 151 ESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
++ ++++ D Y+ + ++ + NLKDP+NP RRNV G + P I MTA+EMA D+
Sbjct: 8 QTHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDE 67
Query: 211 M 211
+
Sbjct: 68 L 68
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + L+ + D + ++ CDS+ A +E ++++ D YK + ++ +
Sbjct: 325 VRDKCIEMLA-AALRTDNDYKEFGTNCDSM--AAEIEDHIYQEIKATDMKYKNRVRSRIS 381
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDPKNP R+NV G + I M+A+EMA D++
Sbjct: 382 NLKDPKNPGLRKNVLAGTLALSRIASMSAEEMASDEL 418
>gi|195115581|ref|XP_002002335.1| GI17330 [Drosophila mojavensis]
gi|193912910|gb|EDW11777.1| GI17330 [Drosophila mojavensis]
Length = 323
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 92 EKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALE 151
EK SS S D R RE + +AL GE E + +A LE
Sbjct: 144 EKKPSSAQTSFPAGGMTDAVRLKCREMLTNALK--IGEVPE------GCAEPEEMAAELE 195
Query: 152 SAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
A++ ++ D YK + ++ + NLKDPKNP R N G V + + MT +EMA D+M
Sbjct: 196 DAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEM 255
>gi|149732314|ref|XP_001503413.1| PREDICTED: PHD finger protein 3 isoform 1 [Equus caballus]
Length = 2042
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 930 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFCFFRDTDAKYKNK 985
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 986 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 1033
>gi|194207770|ref|XP_001916902.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Equus caballus]
Length = 1162
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V A+ +V +E+ D V + ++V +A +E+A+F+ + YK KY+++L
Sbjct: 534 VRGTVVRAMQEVLWSRLQELPDLVLSEEAVEGIAAGIEAALFDLTQATNCRYKTKYRSLL 593
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+NPD V G V P+ +V M++ ++A ++
Sbjct: 594 FNLRDPRNPDLFLKVVHGDVTPQGLVQMSSIQLAPQRL 631
>gi|350585852|ref|XP_003482063.1| PREDICTED: SPOC domain-containing protein 1-like [Sus scrofa]
Length = 1288
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V A+ +V +E+ D V + +V +A +E+A+F+ +G Y+ KY+++L
Sbjct: 593 VRSTVVRAMREVLWSRLQELPDLVLSEGAVEGLAAGIEAALFDLTHATNGHYRTKYRSLL 652
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+NPD V G V P+ +V M + ++A ++
Sbjct: 653 FNLRDPRNPDLFLKVIHGDVTPQGLVRMNSVQLAPQEL 690
>gi|395526680|ref|XP_003765486.1| PREDICTED: uncharacterized protein LOC100925432 [Sarcophilus
harrisii]
Length = 1362
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 113 EVVREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKA 171
E VR V D+L +V + +E + ++VR +A +E+A+F+ D YK KY++
Sbjct: 766 EQVRSAVADSLREVLLKRLQEPANLTVGEEAVRGIAANIEAAIFDLMQCTDYRYKTKYRS 825
Query: 172 VLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ NL+DP+N D V G + P+ +V M+A E+A ++
Sbjct: 826 LVFNLRDPRNKDLFLQVIRGDITPQGLVRMSATELASQEL 865
>gi|327280228|ref|XP_003224854.1| PREDICTED: PHD finger protein 3-like [Anolis carolinensis]
Length = 2037
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 94 TNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESA 153
+N+ +S + D R+ VR+ + + L K ++ +I +E A +VA +E
Sbjct: 910 SNTHTPVSSATKPSVDQIRQSVRQSLKEILEKRLTDSTLKIPEERAA----KVATKIEKE 965
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLS 213
+F + D YK KY++++ NLKDPKN + V G+V P+ ++ M+ +E+A ++ +
Sbjct: 966 LFSFFRDTDSKYKNKYRSLIFNLKDPKNKILFKRVLKGEVTPDHLIRMSPEELASKELAA 1025
Query: 214 CYQR 217
+R
Sbjct: 1026 WRKR 1029
>gi|149732316|ref|XP_001503414.1| PREDICTED: PHD finger protein 3 isoform 2 [Equus caballus]
Length = 1954
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 842 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFCFFRDTDAKYKNK 897
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 898 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 945
>gi|327276421|ref|XP_003222968.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 209
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E +++ D YK + ++ + NLKD KNPD R+NV G + PE I M
Sbjct: 68 DCEEMAAQIEEFIYQDVKNTDLKYKNRVRSHISNLKDSKNPDLRKNVLCGVITPEEIAVM 127
Query: 202 TAKEMAGDKM 211
T++EMA +++
Sbjct: 128 TSEEMASNEL 137
>gi|195475592|ref|XP_002090068.1| GE19417 [Drosophila yakuba]
gi|194176169|gb|EDW89780.1| GE19417 [Drosophila yakuba]
Length = 313
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A LE A++ ++ D YK + ++ + NLKDPKNP R N G V + + MT +E
Sbjct: 180 MAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEE 239
Query: 206 MAGDKM 211
MA D+M
Sbjct: 240 MASDEM 245
>gi|301777208|ref|XP_002924013.1| PREDICTED: SPOC domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 1182
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V A+ +V +E+ D V + ++V +A +E+A+F+ YK KY+++L
Sbjct: 561 VRGTVVHAMQEVLWSRLQELPDLVLSEEAVEGIAAGIETALFDLTQATSCRYKTKYRSLL 620
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+NPD V G V P +V M+ ++A ++
Sbjct: 621 FNLRDPRNPDLFLKVVQGDVTPHDLVRMSTAQLAPQEL 658
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + + D++ ++ CD ++A +E + + D Y+ + ++ +
Sbjct: 192 VRDKCVEMLS-AALKMDDDYKEYGVNCD--KMASEIEDHILSELKGTDMKYRNRVRSRIS 248
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP+ RRNV G + I MTA+EMA D++
Sbjct: 249 NLKDPRNPNLRRNVLCGAISTSLIARMTAEEMASDEL 285
>gi|307105461|gb|EFN53710.1| hypothetical protein CHLNCDRAFT_53651 [Chlorella variabilis]
Length = 1283
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 111 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
R+ VR + AL V+ EA E + A A+E+A+F+ + YK K++
Sbjct: 367 LRQKVRGGIQQALELVATEAAGEAG---RLPEPAPTAEAVEAALFKLYGGTTKDYKQKFR 423
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
+ NLKD NPD R +V G + P+ V MTA E+A +K L+ Y++
Sbjct: 424 TLQFNLKDAHNPDLRAHVLRGDIAPDAFVRMTATELA-NKELAAYRK 469
>gi|118088827|ref|XP_426199.2| PREDICTED: PHD finger protein 3 [Gallus gallus]
Length = 2065
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R V++ + + L K ++ +I +E A +VA +E +F + D YK K
Sbjct: 933 DQIRHSVKQSLKEILMKRLTDSSLKIPEERAA----KVATRIERELFSFFRDTDSKYKNK 988
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A ++ + QR
Sbjct: 989 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQR 1037
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F D YK + ++ + NLKD KNP RRNV G + P+ I MT++EMA D
Sbjct: 170 IEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASD 229
Query: 210 KM 211
++
Sbjct: 230 EL 231
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR+K + LS + + D + ++ CD ++A +E ++++ D Y+ + ++ +
Sbjct: 201 VRDKCVEMLS-AALKMDGDYKEYGVNCD--KMASEIEDHIYQELKGTDMKYRNRVRSRIS 257
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 258 NLKDPRNPSLRRNVLCGAISTSLIARMTAEEMASDEL 294
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE E+ + +
Sbjct: 97 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE---ELGS--QI 151
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
I + ++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+
Sbjct: 152 EEDILFQVPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 211
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 212 EMASDEL 218
>gi|326916345|ref|XP_003204468.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Meleagris
gallopavo]
Length = 2064
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R V++ + + L K ++ +I +E A +VA +E +F + D YK K
Sbjct: 933 DQIRHSVKQSLKEILMKRLTDSSLKIPEERAA----KVATRIERELFSFFRDTDSKYKNK 988
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A ++ + QR
Sbjct: 989 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQR 1037
>gi|195030242|ref|XP_001987977.1| GH10818 [Drosophila grimshawi]
gi|193903977|gb|EDW02844.1| GH10818 [Drosophila grimshawi]
Length = 350
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A LE A++ ++ D YK + ++ + NLKDPKNP R N G V + + MT +E
Sbjct: 217 MAAELEDAIYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEE 276
Query: 206 MAGDKM 211
MA D+M
Sbjct: 277 MASDEM 282
>gi|345304943|ref|XP_001505863.2| PREDICTED: PHD finger protein 3-like [Ornithorhynchus anatinus]
Length = 1190
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ V+ + D L K +++ +I +E + +VA+ +E +F + D YK K
Sbjct: 82 DQIRQSVKHSLKDILMKRLTDSNLKIPEE----RASKVAMKIEKELFSFFRDTDAKYKNK 137
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKDPKN + V G+V P+ ++ M+ +E+A K L+ ++R
Sbjct: 138 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS-KELAAWRR 185
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F D YK + ++ + NLKD KNP RRNV G + P+ I MT++EMA D
Sbjct: 170 IEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASD 229
Query: 210 KM 211
++
Sbjct: 230 EL 231
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F + D YK + ++ + NLKD KNPD R+NV G + PE I M+ +E
Sbjct: 159 LAAQIEEVVFGEMQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEE 218
Query: 206 MAGDKM 211
MA +++
Sbjct: 219 MASNEL 224
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F + D YK + ++ + NLKD KNPD R+NV G + PE I M+ +E
Sbjct: 159 LAAQIEEVVFGEMQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEE 218
Query: 206 MAGDKM 211
MA +++
Sbjct: 219 MASNEL 224
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F D YK + ++ + NLKD KNP RRNV G + P+ I MT++EMA D
Sbjct: 144 IEECIFLDVGNADMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASD 203
Query: 210 KM 211
++
Sbjct: 204 EL 205
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F D YK + ++ L NLKD KNP RR V G + P+ I MT++E
Sbjct: 167 LAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEE 226
Query: 206 MAGDKM 211
MA D++
Sbjct: 227 MASDEL 232
>gi|22327517|ref|NP_680377.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|332007413|gb|AED94796.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 233
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 18/117 (15%)
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEA-DEEIRDEV-NACDSVRVAIALESAMFEKWDR 160
+M + D R+ V E + +L+KV+ E D E++ V CD VA+++ESAM
Sbjct: 108 TMKKTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCDPWVVAVSVESAM------ 161
Query: 161 YDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
++L N+ D NPD RR V +G++ E +V M EM +K+ QR
Sbjct: 162 ----------SILFNMGDSNNPDLRRKVLIGEISGERLVKMEKDEMGSEKIQKEVQR 208
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F D YK + ++ L NLKD KNP RR V G + P+ I MT++E
Sbjct: 167 LAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEE 226
Query: 206 MAGDKM 211
MA D++
Sbjct: 227 MASDEL 232
>gi|333361278|pdb|3NDQ|A Chain A, Structure Of Human Tfiis Domain Ii
Length = 108
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E A++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+EMA D
Sbjct: 48 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 107
Query: 210 K 210
+
Sbjct: 108 E 108
>gi|402853390|ref|XP_003891378.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Papio anubis]
Length = 280
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 87 ESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDEVNACDSV 144
ES T + + + S+ C+ + VR+K + LS + +AD++ +D CD
Sbjct: 157 ESPRTPSSPLTPTFASSICLLAPCYLTGDSVRDKCVEMLS-AALKADDDYKDYGVNCD-- 213
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
++A +E ++++ D Y+ + ++ + NLKDP+NP RRNV G + I MTA+
Sbjct: 214 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 273
Query: 205 EMAG 208
AG
Sbjct: 274 VRAG 277
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 116 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGN 175
RE + ++L +V GE + + E VA A E +FE++ + YK + ++ + N
Sbjct: 145 REMIVNSL-QVQGEFEAVTKPE-------EVAAACEQLIFEEFKDTNVKYKQRIRSRVNN 196
Query: 176 LKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
L+DPKNP + V G++ P + MT++EMA D+M
Sbjct: 197 LRDPKNPMLKVRVLGGEISPARLAVMTSEEMASDEM 232
>gi|412991105|emb|CCO15950.1| predicted protein [Bathycoccus prasinos]
Length = 768
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 139 NACDSVRVAIALESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPET 197
NA + +A+ +E A+FE+ R G Y + ++++ NL+DP+NP R V V ET
Sbjct: 140 NALNPSEIAVGIERALFERCGRDTGKEYGVHARSLMFNLRDPQNPTLRARVLHENVSAET 199
Query: 198 IVGMTAKEMAGDKML 212
+V MT E+A +++
Sbjct: 200 LVKMTPAELANKELI 214
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
++ +E +F D YK + ++ + NLKD KNPD RRNV G + P+ I MT++E
Sbjct: 459 LSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEE 518
Query: 206 MAGDKM 211
MA D++
Sbjct: 519 MASDEL 524
>gi|47215864|emb|CAG02327.1| unnamed protein product [Tetraodon nigroviridis]
Length = 124
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+++++ + YK + ++ + NLKD KNP+ RRNV G + P+ I M+A+EMA ++
Sbjct: 1 IYQEFKSTEMKYKTRLRSRISNLKDHKNPELRRNVLCGNISPQRIASMSAEEMASAEL 58
>gi|363742332|ref|XP_003642622.1| PREDICTED: transcription elongation factor A protein 3-like [Gallus
gallus]
Length = 398
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 91 TEKTNSSDNLSRSMIRCNDCF--REVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAI 148
T +T S + S S+ C+ + VR+K + L+ D+ VN C+ ++A
Sbjct: 216 TPRTPGSPSFSPSICLLPPCYLTGDSVRDKCIEMLTAALRMDDDYKEFGVN-CE--KMAS 272
Query: 149 ALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
+E +F++ D Y+ + ++ + NLKDPKNP+ RRNV G + P I MTA
Sbjct: 273 EIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPNLRRNVLCGAIAPALIARMTA 327
>gi|145351408|ref|XP_001420072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580305|gb|ABO98365.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 173
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 104 MIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDG 163
+ R ND R+ RE DAL+ + E V+A + +E++M KW
Sbjct: 1 LTRVNDAARDRTREIFADALALCVTDGKIE---SVDAKKLASIVDQIENSMTAKWPSGGK 57
Query: 164 PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
YK K + + NLKD KNPD R N+ G++ ++ ++ +E+ ++ + +R
Sbjct: 58 DYKAKVRQLAFNLKDAKNPDLRTNLATGEISAGVLIDLSPEELGSNERRNANER 111
>gi|357607939|gb|EHJ65747.1| transcription elongation factor S-II [Danaus plexippus]
Length = 292
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKI 167
D R RE + AL K+ GE NAC + +A LE ++ ++ D YK
Sbjct: 129 DAVRLKCRELLTQAL-KIDGE-------NPNACATPEELAEDLEECIYAEFKNTDMRYKN 180
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ ++ + NLKDPKNP R N G + + MT +EMA D+M
Sbjct: 181 RVRSRVANLKDPKNPTLRTNFLNGVINAARLAKMTPEEMASDEM 224
>gi|410966896|ref|XP_003989963.1| PREDICTED: SPOC domain-containing protein 1 [Felis catus]
Length = 1178
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V A+ +V +E+ D V + ++V +A +E+A+F+ + YK KY+++L
Sbjct: 570 VRGAVVHAMREVLWSRLQELPDLVLSEEAVGGIAADIEAALFDLTQATNCRYKTKYRSLL 629
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+NPD V G V P +V M++ ++A ++
Sbjct: 630 FNLRDPRNPDLFLKVLQGDVTPHGLVRMSSTQLAPQEL 667
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D ++ +E +++ D YK + ++ + NLKD KNPD R+NV G + PE I M
Sbjct: 228 DCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVM 287
Query: 202 TAKEMAGDKM 211
T++EMA +++
Sbjct: 288 TSEEMASNEL 297
>gi|328709087|ref|XP_001946550.2| PREDICTED: hypothetical protein LOC100167834 [Acyrthosiphon pisum]
Length = 1750
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 111 FREVVREKVCDALS-KVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKY 169
R VR+ + ++LS ++S E + + ++ D + + +E ++ ++ + D YK KY
Sbjct: 989 LRSNVRKSLLESLSSRISEEPELKTAEQ----DLEELILKIEEELYNQFSKVDQKYKTKY 1044
Query: 170 KAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
+++L N+KDPKN +F + + V P +V MTA EMA ++ +R
Sbjct: 1045 RSLLFNIKDPKNLNFFKKIMFKWVTPYQLVRMTADEMASQELAEWRER 1092
>gi|302831355|ref|XP_002947243.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
gi|300267650|gb|EFJ51833.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
Length = 304
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 106 RCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPY 165
RC + R+ VR + +AL+ I D AL + G Y
Sbjct: 152 RCGNDTRDKVRVMLAEALAVGFNSGGAVIED------------ALHELLAGSGSSVSGEY 199
Query: 166 KIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
K K +++ NLKD KNPD R V G + PE++V M+A+E+A D+
Sbjct: 200 KAKARSLCFNLKDAKNPDLRERVLSGSIPPESLVRMSAEELASDE 244
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 21/150 (14%)
Query: 80 SSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFR--EVVREKVCDALSKVSGEADEEIRDE 137
+S+ + ES T + + + S+ C+ + VR+K + LS + +AD++ +D
Sbjct: 131 NSSKSKAESPRTPSSPLTPTFASSICLLAPCYLTGDSVRDKCVEMLS-AALKADDDYKDY 189
Query: 138 VNACDSVRVAIALESAMFEK------WDRYDGP----------YKIKYKAVLGNLKDPKN 181
CD ++A +E + E DR P Y+ + ++ + NLKDP+N
Sbjct: 190 GVNCD--KMASEIEDHILELCQGCGCLDRLAAPLQELKSTDMKYRNRVRSRISNLKDPRN 247
Query: 182 PDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
P RRNV G + I MTA+EMA D++
Sbjct: 248 PGLRRNVLSGAISAGLIAKMTAEEMASDEL 277
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 151 ESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
E ++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+EMA D+
Sbjct: 174 EVPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDE 233
Query: 211 M 211
+
Sbjct: 234 L 234
>gi|159474128|ref|XP_001695181.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276115|gb|EDP01889.1| predicted protein [Chlamydomonas reinhardtii]
Length = 348
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
YK K +++ NLKD KNPD R V G V PET+V ++A+EMA D+
Sbjct: 233 YKAKARSLCFNLKDAKNPDLRERVLSGSVPPETLVRLSAEEMASDE 278
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 151 ESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
E ++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+EMA D+
Sbjct: 174 EVPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDE 233
Query: 211 M 211
+
Sbjct: 234 L 234
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK-----VSGEADEEIRDEVNACDS 143
++TN+ D S R +D R RE + AL G +EE+ ++ D
Sbjct: 97 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEE-DI 155
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
+ V I + ++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA
Sbjct: 156 LCVYIHI-VPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTA 214
Query: 204 KEMAGDKM 211
+EMA D++
Sbjct: 215 EEMASDEL 222
>gi|312382732|gb|EFR28086.1| hypothetical protein AND_04400 [Anopheles darlingi]
Length = 420
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 86 PESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVR 145
P S+ ++ +N++D + ++C RE + +AL +V GE E + + +
Sbjct: 157 PVSIPSQSSNTTDAVR---LKC--------REMLANAL-RVDGEPPEGCQTPEELGEELE 204
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
AI F ++ D YK + ++ + NLKDPKNP R N G + + + MT++E
Sbjct: 205 EAI------FVEFKNTDMRYKNRIRSRVANLKDPKNPSLRSNFVSGALTAQRLAKMTSEE 258
Query: 206 MAGDKM 211
MA D+M
Sbjct: 259 MASDEM 264
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 151 ESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
E +F D YK + ++ L NLKD KNP RR V G + P+ I MT++EMA D+
Sbjct: 158 EYILFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDE 217
Query: 211 M 211
+
Sbjct: 218 L 218
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 188 IYQEIRNTDMKYKNRIQSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 245
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
D YK + ++ + NLKD KNP RRNV G + P+ I MT++EMA D++
Sbjct: 181 DMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDEL 230
>gi|390348322|ref|XP_799219.3| PREDICTED: transcription elongation factor S-II-like
[Strongylocentrotus purpuratus]
Length = 306
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 113 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAV 172
+VVRE+ L A ++ D D +A +E ++ ++ D YK + ++
Sbjct: 140 DVVRERCKQMLVNALKVAIPDLDDGEELQDPEELAGIIEDCIYTEFGNSDLRYKNRVRSR 199
Query: 173 LGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
+ NL+D KNPD RR V G + E I M A+EMA + M Q+
Sbjct: 200 VSNLQDSKNPDLRRMVLRGTIPAEKIASMAAEEMASEAMKQMRQK 244
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK + ++ + NLKD KNP+ RRNV G + P+ I MT++EMA D++
Sbjct: 157 YKNRVRSRISNLKDAKNPELRRNVLCGAITPQQIAVMTSEEMASDEL 203
>gi|281346348|gb|EFB21932.1| hypothetical protein PANDA_019839 [Ailuropoda melanoleuca]
Length = 264
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 140 IYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 197
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK-----VSGEADEEIRDEVNACDS 143
E+ N+ D S R +D R RE + AL G +EE+ ++ D
Sbjct: 163 EEANARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEE-DI 221
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
+ V + + +++ D YK + ++ + NLKD KNP+ R+NV G + P+ MTA
Sbjct: 222 LSVLVPI----YQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTA 277
Query: 204 KEMAGDKM 211
+EMA D++
Sbjct: 278 EEMASDEL 285
>gi|389743667|gb|EIM84851.1| transcription elongation factor [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 91 TEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIAL 150
T +T +D ++ + R D R+ E + DAL+ SG E I + A A
Sbjct: 122 TTRTTKTDGINTDVTR--DKTRDKCIELLYDALAFDSGAPSELI---------FQRAKAA 170
Query: 151 ESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
E A+F ++ G YK K ++++ NLKD KNP R +V G + + MT+++MA +
Sbjct: 171 EDAVFHTFNGTTGDYKTKIRSLVVNLKDKKNPGLRESVVSGDLPAAKLAKMTSQDMASE 229
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
AC+ +A +E +++ ++ + YK + ++ + NL+D KNP R V G + PE +
Sbjct: 173 ACE---LAAGIEQSIYNEFKNTEMKYKTRVRSRVANLRDSKNPKLREGVMYGFIPPERMA 229
Query: 200 GMTAKEMAGDKM 211
MT++EMA D +
Sbjct: 230 SMTSEEMASDDL 241
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 141 CDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
C+S+ I E ++++ D YK + ++ + NLKDPKNP R+NV G ++ I
Sbjct: 484 CESMGAEI--EDHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGSIELRRIAT 541
Query: 201 MTAKEMAGDKM 211
M+A+EMA D++
Sbjct: 542 MSAEEMASDEL 552
>gi|431891278|gb|ELK02155.1| Zinc finger protein 436 [Pteropus alecto]
Length = 622
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
Y+ + ++ + NLKDP+NP RRNV G + E I MTA+EMA D++
Sbjct: 3 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAELIAKMTAEEMASDEL 49
>gi|242017625|ref|XP_002429288.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
gi|212514184|gb|EEB16550.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
Length = 289
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 136 DEVNACDS-VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVK 194
D+V+ C S +A LE A+F ++ D YK + ++ + NLKDPKNP+ R N +G +
Sbjct: 145 DQVDGCGSPEDLAEELEEAIFNEFRNTDIKYKNRIRSRVANLKDPKNPNLRMNYLIGALP 204
Query: 195 PETIVGMTAKEMAGDKM 211
+ MTA+E+A D+M
Sbjct: 205 ASRLAVMTAEELASDEM 221
>gi|452821015|gb|EME28050.1| hypothetical protein Gasu_43890 [Galdieria sulphuraria]
Length = 707
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 113 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAV 172
E +REK + L+++ E E+ +++ + ++AI +E+A+FEK+ + D Y + +++
Sbjct: 183 ENIREKAKNVLNQILLENLEDTGVDIDKTNISKIAIDIENALFEKYFKAD--YLEQLRSL 240
Query: 173 LGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+ +N D +R + + + P + MTA E+A M
Sbjct: 241 TFNLRGKRNLDLKRAIVMSDISPTRLAEMTADELASKSM 279
>gi|327268236|ref|XP_003218904.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Anolis carolinensis]
Length = 350
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ A +E +F D YK ++ + NLK+PKN + ++H+G + P+T GM+A
Sbjct: 199 QTAEEIEQHIFALHAGNDRKYKNSIRSKVSNLKNPKNYHLKHSLHIGVLSPQTFAGMSAV 258
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 259 EMAHDEL 265
>gi|290462619|gb|ADD24357.1| Transcription elongation factor S-II [Lepeophtheirus salmonis]
Length = 291
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 12/126 (9%)
Query: 92 EKTNSSDNLSRSM-----IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVR- 145
E S+ LS+S I D R RE + +AL + + + I C S
Sbjct: 104 ESNAKSNGLSKSFPQKTNIATTDDVRLRCREMLTNALKGIGSDLPDGI------CKSPEE 157
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E A+F + YK + ++ + NLKD KNP R NV G ++P MTA E
Sbjct: 158 LADLIEEAIFSNFKSTSAKYKNQIRSRVFNLKDKKNPALRENVLTGIIEPSKFAVMTADE 217
Query: 206 MAGDKM 211
MA +++
Sbjct: 218 MASNEV 223
>gi|240972273|ref|XP_002400972.1| transcription factor S-II, putative [Ixodes scapularis]
gi|215490968|gb|EEC00609.1| transcription factor S-II, putative [Ixodes scapularis]
Length = 255
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 136 DEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK----AVLGNLKDPKNPDFRRNVHLG 191
D + CD +A +E + W G +KYK + + NLKD KNP+ R NV G
Sbjct: 109 DMPDGCDLDGLAAKIEEYILS-WHCEFGDTNMKYKNRVRSRVSNLKDSKNPNLRLNVLHG 167
Query: 192 QVKPETIVGMTAKEMAGDKM 211
+ P+ I MTA EMA D+M
Sbjct: 168 AIDPDRIARMTADEMASDEM 187
>gi|428183234|gb|EKX52092.1| hypothetical protein GUITHDRAFT_133829 [Guillardia theta CCMP2712]
Length = 390
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 16/88 (18%)
Query: 109 DCFREVVREKVCDALSK--VSGEADEEIRDEVNACDSVRVAIALESAMFE----KWDRYD 162
+ R+++REK+CDAL + G D+ +A D+ AIA+E +M++ D +
Sbjct: 251 NAVRDLIREKLCDALQPHVLPG-------DKYSALDA---AIAIEHSMYQYRFFGKDESN 300
Query: 163 GPYKIKYKAVLGNLKDPKNPDFRRNVHL 190
YK + +++L NL+D KNPD RR V L
Sbjct: 301 SRYKGRARSILFNLRDSKNPDLRRRVRL 328
>gi|118791506|ref|XP_319787.3| AGAP009035-PA [Anopheles gambiae str. PEST]
gi|116117634|gb|EAA14772.3| AGAP009035-PA [Anopheles gambiae str. PEST]
Length = 315
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDS-VRVAIALESAMFEKWDRYDGPYKI 167
D R RE + +AL +V GE E C + + LE A+F ++ D YK
Sbjct: 152 DAVRLKCREMLANAL-RVDGEPPE-------GCQTPEELGEELEEAIFVEFKNTDMRYKN 203
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ ++ + NLKDPKNP R N G + + + MT++EMA D+M
Sbjct: 204 RVRSRVANLKDPKNPSLRANFVSGAITAQRLAKMTSEEMASDEM 247
>gi|317418995|emb|CBN81033.1| Death-inducer obliterator 1 [Dicentrarchus labrax]
Length = 2389
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 99 NLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW 158
++S N+ R+ +R + D L K ++D+ ++ + R+A+A+E MF
Sbjct: 649 HVSPMPPPPNNQMRQNIRRSLTDILYKRVSDSDDL---KMTESEVGRLAVAIEKEMFNLC 705
Query: 159 DRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEM 206
D YK KY++++ NLKDPKN V G+V P +V ++A+E+
Sbjct: 706 LSTDSKYKNKYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEEL 753
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 182 DMKYKNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDEL 231
>gi|209876019|ref|XP_002139452.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
gi|209555058|gb|EEA05103.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
Length = 322
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 38/209 (18%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDK----RTSEECQEISGV 64
I D A +LI W+N + ++ + S + P K+ K+D+ RT E+ ++IS
Sbjct: 72 IADMADNLIRKWKNSLALEGKERSQSSQKSDSESLPKKVAKIDESYGLRTPEK-EDISET 130
Query: 65 GIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALS 124
+KV+ V + T + + R+ R+ + A
Sbjct: 131 ASIKVKNVHNSYTGPLTG--------------------------EPLRDKARQFLWKAFV 164
Query: 125 KVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDG----PYKIKYKAVLGNLKDPK 180
+ E+ D C+ ++ +ESA+++++ G Y ++ K + NL D K
Sbjct: 165 MGVPVSQAELMDPSQVCE---ISAEVESALYKEYIIKQGNSVRDYNLQLKTIKWNLGDLK 221
Query: 181 NPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
NP+ +++G++ P+ I M ++EMA +
Sbjct: 222 NPELNSKLYIGKITPDEIATMHSREMASE 250
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 152 SAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
S ++++ D Y+ + ++ + NLKDP+NP RRNV G + I MTA+EMA D++
Sbjct: 303 SHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLNGAISAGLIAKMTAEEMASDEL 362
>gi|345324936|ref|XP_003430868.1| PREDICTED: transcription elongation factor A protein 3-like
[Ornithorhynchus anatinus]
Length = 281
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
++A +E ++++ D Y+ + ++ + NL+DP+NP RR+V G + I MTA+
Sbjct: 147 QLASEIEDHIYQELKSTDMKYRNRVRSRISNLRDPRNPALRRSVLCGGIAASRIARMTAE 206
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 207 EMASDEL 213
>gi|351709942|gb|EHB12861.1| SPOC domain-containing protein 1 [Heterocephalus glaber]
Length = 1116
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+A+F+ YKIKY+++L NL+DP+NPD V G V P +V M + +
Sbjct: 550 IAAGIEAALFDLTQGTSCRYKIKYRSLLFNLRDPRNPDLFLKVVHGDVTPHDLVRMNSVQ 609
Query: 206 MAGDKM 211
+A ++
Sbjct: 610 LAPQEL 615
>gi|410920567|ref|XP_003973755.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Takifugu rubripes]
Length = 2311
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N+ R+ +R + D L K ++D+ ++ + R+A A+E MF D YK
Sbjct: 639 NNQMRQNIRRSLTDILYKRVSDSDDL---KMTESEVGRLAFAIEKEMFNLCLNTDSKYKN 695
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY++++ NLKDPKN V G V P +V ++A+E+ +M
Sbjct: 696 KYRSLMFNLKDPKNKGLFYRVIGGDVTPFRLVRLSAEELLSKEM 739
>gi|170036779|ref|XP_001846239.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879682|gb|EDS43065.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 292
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 153 AMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
A+F + D YK + ++ + NLKDPKNP R N G + E + MT +EMA D+M
Sbjct: 166 AIFAEIKNTDFRYKNRVRSRVANLKDPKNPSLRANFVSGAITAERLAKMTPEEMASDEM 224
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
D YK + ++ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 246 DMKYKNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDEL 295
>gi|440896934|gb|ELR48725.1| SPOC domain-containing protein 1, partial [Bos grunniens mutus]
Length = 1171
Score = 49.7 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 41/66 (62%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+A+F +G YK KY+++L NL+DP+NP+ V G + P +V M++ +
Sbjct: 581 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 640
Query: 206 MAGDKM 211
+A ++
Sbjct: 641 LAPQEL 646
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
D YK + ++ + NLKD KNP+ ++NV G + PE I MT++EMA +++
Sbjct: 167 DMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNEL 216
>gi|91084035|ref|XP_966732.1| PREDICTED: similar to transcription elongation factor S-II
[Tribolium castaneum]
gi|270008004|gb|EFA04452.1| hypothetical protein TcasGA2_TC014756 [Tribolium castaneum]
Length = 294
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLS 213
+F+++ D YK + ++ + NLKD KNP+ R N +G + + MTA+EMA D++
Sbjct: 169 IFQEFKNTDMRYKNRVRSRIANLKDVKNPNLRTNFRIGAIPASRLAVMTAEEMANDEIKQ 228
Query: 214 CYQR 217
+R
Sbjct: 229 LRER 232
>gi|114050769|ref|NP_001040406.1| transcription elongation factor S-II [Bombyx mori]
gi|95102774|gb|ABF51328.1| transcription elongation factor S-II [Bombyx mori]
Length = 288
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDS-VRVAIALESAMFEKWDRYDGPYKI 167
D R RE + AL K +GE NAC S +A LE ++ ++ D YK
Sbjct: 125 DAVRLKCRELLTQAL-KAAGETS-------NACGSPEELAEELEECIYAEFKNTDMRYKN 176
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ ++ + NLKDPKNP R N G + + MT +EMA D+M
Sbjct: 177 RVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEM 220
>gi|194664368|ref|XP_588581.4| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|297472143|ref|XP_002685704.1| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|296490254|tpg|DAA32367.1| TPA: SPOC domain containing 1-like [Bos taurus]
Length = 1249
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 41/66 (62%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+A+F +G YK KY+++L NL+DP+NP+ V G + P +V M++ +
Sbjct: 659 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 718
Query: 206 MAGDKM 211
+A ++
Sbjct: 719 LAPQEL 724
>gi|67968616|dbj|BAE00667.1| unnamed protein product [Macaca fascicularis]
Length = 117
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK + ++ + NLKD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 3 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 49
>gi|384246149|gb|EIE19640.1| hypothetical protein COCSUDRAFT_25684 [Coccomyxa subellipsoidea
C-169]
Length = 127
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+ YK KY++++ NLKD NPD RR V G++ + +V ++A+E+A D
Sbjct: 9 NARYKAKYRSLIFNLKDANNPDLRRRVLSGEITGDVLVNLSAEELASD 56
>gi|291233503|ref|XP_002736692.1| PREDICTED: transcription elongation factor A 1-like [Saccoglossus
kowalevskii]
Length = 138
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ YK + ++ + NLKD +NP R+ V G + PE I MTA+EMA D++
Sbjct: 21 EAKYKTRVRSRVANLKDVRNPILRQQVLCGSIPPEKIANMTAEEMASDRL 70
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 143 SVRVAIALESAMFEKWDRY--------DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVK 194
S + ++L + + W R D Y+ + ++ + NLKDP+NP RRNV G +
Sbjct: 67 SDKEVVSLAKVLIKNWKRLLAGELKGTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAIS 126
Query: 195 PETIVGMTAKEMAGDKM 211
I MTA+EMA D++
Sbjct: 127 AGLIAKMTAEEMASDEL 143
>gi|326673092|ref|XP_686400.5| PREDICTED: hypothetical protein LOC553518 [Danio rerio]
Length = 1738
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 111 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
R VR+ + + L K S E+D +I + A VA E +F + D YK KY+
Sbjct: 802 IRRSVRDSLEEILLKRSKESDLKISSDRPA----EVARRTEKELFALFQGVDSKYKNKYR 857
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
++ NLKD KN + V G+V P +V MTA+E+A ++ + +R
Sbjct: 858 SLTFNLKDAKNNVLFKRVLKGEVSPADLVRMTAEELASKELAAWRKR 904
>gi|170036777|ref|XP_001846238.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879681|gb|EDS43064.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 301
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 19/109 (17%)
Query: 109 DCFREVVREKVCDALSKVSGE------ADEEIRDEVNACDSVRVAIALESAMFEKWDRYD 162
D R RE + A+ +V GE EE+ DE LE A+F ++ D
Sbjct: 138 DAVRLKCREMLASAI-RVDGEPPEGCQTPEELGDE------------LEEAIFSEFRNTD 184
Query: 163 GPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK + ++ + NLKD KNP R N G + + + MT +EMA D+M
Sbjct: 185 MKYKNRVRSRVANLKDLKNPSLRSNYINGAITAQRLAKMTPEEMASDEM 233
>gi|392584823|gb|EIW74165.1| transcription elongation factor [Coniophora puteana RWD-64-598 SS2]
Length = 294
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ E + D L+ SG ++I + A A+E+A+F ++ YK K
Sbjct: 133 DNTRDKCSELMYDGLASDSGAPSDQIASK---------AAAVETAVFNQFGSTSAEYKSK 183
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+++ NLKD NP R + G + P M++ EMA +
Sbjct: 184 IRSLFVNLKDKNNPSLRETIVSGDLSPSKFATMSSSEMASE 224
>gi|356509950|ref|XP_003523705.1| PREDICTED: uncharacterized protein LOC100791982 [Glycine max]
Length = 1090
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+ +F+ + + YK K +++L NLKD NP+ R V G++ PE + MTA+E
Sbjct: 366 LASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDHNNPELRERVMFGKIPPEQLCSMTAEE 425
Query: 206 MAGDKM 211
+A ++
Sbjct: 426 LASKEL 431
>gi|145349019|ref|XP_001418938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579168|gb|ABO97231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 528
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 111 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
R VRE + A+ + E DE N S VA A+ESA+++K D Y+ + +
Sbjct: 11 IRSTVREFILKAMEMAAEETKASGHDEANGTPS-EVAAAVESALYKKCGSADKEYRTRAR 69
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKML 212
++ NL+D +NP R V +K +V M+ ++A +++
Sbjct: 70 SLKSNLQDVRNPQLRARVLANDLKASQLVDMSPLQLANKELV 111
>gi|119579238|gb|EAW58834.1| hCG1746234, isoform CRA_b [Homo sapiens]
Length = 241
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK + ++ + NL D KNPD R+N G + P+ + MTA+EMA D++
Sbjct: 127 YKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDEL 173
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 92 EKTNSSDNLSRSMIRC---NDCFREVVREKVCDALSK----VSGEADEEIRDEVNACDSV 144
++TN+ D S R +D R RE + AL V+ ADEE
Sbjct: 135 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEE----------- 183
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+ +E A++++ D YK + ++ + KD KNP+ R+NV G + P+ MTA+
Sbjct: 184 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISVPKDAKNPNLRKNVLCGNIPPDLFARMTAE 243
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 244 EMASDEL 250
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++++ D YK + ++ + NLKDPKNP R+NV G + I M+A+EMA D++
Sbjct: 299 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEEMASDEL 356
>gi|431891151|gb|ELK02028.1| SPOC domain-containing protein 1 [Pteropus alecto]
Length = 1093
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V A+ +V E D V + + V +A +E+A+F+ + YK KY+++L
Sbjct: 550 VRGTVVRAMQEVLWSRLLEFPDLVLSEEVVESIAAGIEAALFDLTQATNCRYKTKYRSLL 609
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+NPD V G + P +V M++ ++A ++
Sbjct: 610 FNLRDPRNPDLFLKVVHGDITPHGLVQMSSMQLAPQEL 647
>gi|196008337|ref|XP_002114034.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
gi|190583053|gb|EDV23124.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
Length = 302
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 149 ALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAG 208
L A+F++ + YK + ++ + NLKD KNP+ + V G + PE I MTA+EMA
Sbjct: 160 GLNKAIFKELKGPNMKYKNRVRSRISNLKDSKNPNLCQKVLSGIITPEQIAKMTAEEMAS 219
Query: 209 DKM 211
D+M
Sbjct: 220 DEM 222
>gi|403412176|emb|CCL98876.1| predicted protein [Fibroporia radiculosa]
Length = 348
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 20/208 (9%)
Query: 2 KASSRKKIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEI 61
++ + K++ D A +++ W+ +E+ + + G T G + P + V ++
Sbjct: 53 RSHAAKEVSDLAKEIVKKWKT-EVEREKQQNAGKSTPNGKVPPMRKASVASTSTATSATP 111
Query: 62 SGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCD 121
SG + A S +R T +D + ++ D R+ E + D
Sbjct: 112 SGTPSTPITPTMTMANGGSKGELR--------TAKTDGIKMNI--TGDKIRDKCVELIYD 161
Query: 122 ALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKN 181
AL+ SG E+I A ++ES + ++ G Y+ K + NLKD N
Sbjct: 162 ALASDSGAPSEQIMSR---------AKSIESTVLAEFSGTTGEYRSKIRTFFVNLKDKNN 212
Query: 182 PDFRRNVHLGQVKPETIVGMTAKEMAGD 209
P R +V G++ + M+++EMA +
Sbjct: 213 PGLRESVISGELPVQKFCRMSSQEMASE 240
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R RE + +AL +V GE E + D + AI +E + D YK +
Sbjct: 140 DAVRLKCREMLTNAL-RVDGEQPEGCQSPEELADELEEAIYVE------FKNTDMKYKNR 192
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ + NLKDPKNP R N G + + + MT +EMA D+M
Sbjct: 193 VRSRVANLKDPKNPSLRSNFVSGAITAQRLAKMTPEEMASDEM 235
>gi|119579237|gb|EAW58833.1| hCG1746234, isoform CRA_a [Homo sapiens]
Length = 160
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK + ++ + NL D KNPD R+N G + P+ + MTA+EMA D++
Sbjct: 46 YKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDEL 92
>gi|356515496|ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808809 [Glycine max]
Length = 1143
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+ +F+ + + YK K +++L NLKD NP+ R V G++ PE + MTA+E
Sbjct: 417 LASRIEAELFKLFQGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIPPEQLCSMTAEE 476
Query: 206 MAGDKM 211
+A ++
Sbjct: 477 LASKEL 482
>gi|170111316|ref|XP_001886862.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638220|gb|EDR02499.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
D R+ E + DAL+ SG E I ++ A A+E+++ D YK
Sbjct: 132 GDSTRDKCTELIYDALASDSGAPVELI---------LKHAKAIEASVLADCDGVTAAYKS 182
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
K +++ NLKD NP R ++ G+++ E MT++EMA +
Sbjct: 183 KIRSLFVNLKDKSNPSLRESIVSGELQAEKFTKMTSQEMASE 224
>gi|156541048|ref|XP_001600804.1| PREDICTED: transcription elongation factor S-II-like [Nasonia
vitripennis]
Length = 312
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+F ++ D Y+ + ++ + NL+D KNP R N +G + P + MTA+EMA D++
Sbjct: 187 IFGEFKNTDNKYRNRVRSRVANLRDSKNPTLRTNFIIGAITPGRLATMTAEEMASDEI 244
>gi|403293239|ref|XP_003937628.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Saimiri boliviensis boliviensis]
Length = 1200
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V +A +E+A+++ DG YK KY+++L
Sbjct: 605 VRGTVFRSMQEVLWTRLRELPDLVLSEEVVEGIAAGIEAALWDLTQGTDGRYKAKYRSLL 664
Query: 174 GNLKDPKNPD-FRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D F R VH G V P +V M++ ++A ++
Sbjct: 665 FNLRDPRNLDLFLRVVH-GDVNPYDLVRMSSMQLAPQEL 702
>gi|307180955|gb|EFN68743.1| Transcription elongation factor A protein 1 [Camponotus floridanus]
Length = 311
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ ++ D YK + ++ + NL+D KNP+ R N +G + P + MTA+EMA D++
Sbjct: 186 IYGEFKNTDNRYKNRVRSRIANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEI 243
>gi|363741478|ref|XP_001234737.2| PREDICTED: death-inducer obliterator 1 [Gallus gallus]
Length = 2152
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Query: 76 ATSLSSNVVRPESVVTEKTNSSDNLSRSMI----RCNDCFREVVREKVCDALSKVSGEAD 131
++SL + + RP + S + S I + N R+ +R + + L K ++D
Sbjct: 724 SSSLGAGLKRPAPSSVPTASGSSQVKVSAIPIQSQPNSQIRQNIRRSLKEILWKRVNDSD 783
Query: 132 EEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLG 191
+ + E + +VA+ +E MF + D YK KY++++ NLKDPKN V G
Sbjct: 784 DLVMTE---SEVGKVALNIEKEMFNLFHVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLHG 840
Query: 192 QVKPETIVGMTAKEMAGDKMLSCYQ 216
++ +V M +E+ K LS ++
Sbjct: 841 EISLSKLVRMKPEELL-SKELSVWK 864
>gi|300120236|emb|CBK19790.2| unnamed protein product [Blastocystis hominis]
Length = 285
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
Y K + +L NL DPKNPD R + G+++PE + MT EMA +M
Sbjct: 27 YNAKLRNILFNLSDPKNPDLRNRIFSGELEPERLPIMTNDEMASSEM 73
>gi|326931937|ref|XP_003212080.1| PREDICTED: death-inducer obliterator 1-like [Meleagris gallopavo]
Length = 2496
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 76 ATSLSSNVVRP--ESVVTEKTNSSDNLSRSMIRC--NDCFREVVREKVCDALSKVSGEAD 131
++SL + + RP SV T +S +S I+ N R+ +R + + L K ++D
Sbjct: 811 SSSLGAGLKRPAPSSVPTASGSSQVKVSAVPIQSQPNSQIRQNIRRSLKEILWKRVNDSD 870
Query: 132 EEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLG 191
+ + E + +VA+ +E MF + D YK KY++++ NLKDPKN V G
Sbjct: 871 DLVMTE---SEVGKVALNIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLHG 927
Query: 192 QVKPETIVGMTAKEMAGDKMLSCYQ 216
++ +V M +E+ K LS ++
Sbjct: 928 EISLSKLVRMKPEELL-SKELSVWK 951
>gi|296081928|emb|CBI20933.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+ +F+ + + YK K +++L NLKD NP+ R V G++ PE + MTA+E
Sbjct: 390 LAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMTAEE 449
Query: 206 MAGDKM 211
+A ++
Sbjct: 450 LASKEL 455
>gi|189514890|ref|XP_001919157.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Danio rerio]
Length = 394
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
R YK ++ + NLK+P NP R+ + GQ+ P+ M+ +EMAG+K+
Sbjct: 258 RNQHKYKFHIRSKVANLKNPNNPHLRQGLISGQLTPDAFAQMSVEEMAGEKL 309
>gi|260826962|ref|XP_002608434.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
gi|229293785|gb|EEN64444.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
Length = 130
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK + ++ NLKDP+NP+ RR + G++ P+ + M+A+EMA D++
Sbjct: 12 YKNRVRSRAANLKDPRNPELRRRLIQGEITPQQMATMSAQEMASDEV 58
>gi|426328836|ref|XP_004025454.1| PREDICTED: SPOC domain-containing protein 1 [Gorilla gorilla
gorilla]
Length = 1173
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V +E+ D V + + V +A +E+A+++ +G YK KY+++L
Sbjct: 608 VRGTVVRSMQEVLWTRLQELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 667
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V P +V M++ ++A ++
Sbjct: 668 FNLRDPRNLDLFLKVVHGDVNPYDLVRMSSMQLAPQEL 705
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A A+E+ +F + + Y+ K K+ + NL+D +NP+ + V G + PE M
Sbjct: 150 DPTNIAAAIENEIFMCFKDTNIKYRNKIKSKVMNLRDKRNPELCQLVIEGVITPERFAKM 209
Query: 202 TAKEMAGDKM 211
TA+EMA D+M
Sbjct: 210 TAEEMASDEM 219
>gi|147841857|emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]
Length = 1059
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+ +F+ + + YK K +++L NLKD NP+ R V G++ PE + MTA+E
Sbjct: 408 LAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMTAEE 467
Query: 206 MAGDKM 211
+A ++
Sbjct: 468 LASKEL 473
>gi|195579326|ref|XP_002079513.1| GD21972 [Drosophila simulans]
gi|194191522|gb|EDX05098.1| GD21972 [Drosophila simulans]
Length = 146
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 155 FEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ +++ D YK + ++ + NLKDPKNP R N G V + + MT +EMA D+M
Sbjct: 22 YSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEM 78
>gi|194894439|ref|XP_001978066.1| GG17893 [Drosophila erecta]
gi|190649715|gb|EDV46993.1| GG17893 [Drosophila erecta]
Length = 162
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A LE A++ + YK + ++ L NL+DPKNP R LG + E + MT +E
Sbjct: 32 MAAQLEEAIYVELKSCQVKYKNRIRSRLANLRDPKNPALREKFLLGLISVEQLARMTPEE 91
Query: 206 MAGDKM 211
MA D +
Sbjct: 92 MASDDL 97
>gi|390465645|ref|XP_003733445.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Callithrix jacchus]
Length = 1096
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V +A +E+A+++ +G YK KY+++L
Sbjct: 507 VRGTVVRSMQEVLWTRLRELPDLVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 566
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V P +V M+++++A ++
Sbjct: 567 FNLRDPRNLDLFLKVVHGDVNPYDLVRMSSRQLAPQEL 604
>gi|156082914|ref|XP_001608941.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia bovis
T2Bo]
gi|154796191|gb|EDO05373.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia
bovis]
Length = 302
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW---DRYDGPYKIKYKA 171
+R+K L K E + D A R+A +E+ +F ++ Y +K K+
Sbjct: 131 IRDKAIIYLFKSLLAGKENVYDHKKAG---RLAYDMEAGLFSRYLYNQNNQKDYTLKLKS 187
Query: 172 VLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+ NLKDPKN F ++ G ++P ++ M A EMA +
Sbjct: 188 IAFNLKDPKNSTFSDKIYNGDIEPRSVAIMEAAEMASE 225
>gi|195355349|ref|XP_002044154.1| GM22558 [Drosophila sechellia]
gi|194129443|gb|EDW51486.1| GM22558 [Drosophila sechellia]
Length = 162
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 147 AIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEM 206
A LE A++ + YK + ++ L NL+DPKNP R +G + P+ + MT +EM
Sbjct: 33 AAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQELSRMTPEEM 92
Query: 207 AGDKM 211
A D +
Sbjct: 93 ASDDL 97
>gi|195566922|ref|XP_002107024.1| GD17224 [Drosophila simulans]
gi|194204421|gb|EDX17997.1| GD17224 [Drosophila simulans]
Length = 141
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 147 AIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEM 206
A LE A++ + YK + ++ L NL+DPKNP R +G + P+ + MT +EM
Sbjct: 12 AAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQELSRMTPEEM 71
Query: 207 AGDKM 211
A D +
Sbjct: 72 ASDDL 76
>gi|357466369|ref|XP_003603469.1| Transcription elongation factor A protein [Medicago truncatula]
gi|355492517|gb|AES73720.1| Transcription elongation factor A protein [Medicago truncatula]
Length = 1132
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+ +F+ + + YK K +++L NLKD NP+ R V G++ PE + MTA+E
Sbjct: 396 LASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKILPEQLCSMTAEE 455
Query: 206 MAGDKM 211
+A ++
Sbjct: 456 LASKEL 461
>gi|348570704|ref|XP_003471137.1| PREDICTED: SPOC domain-containing protein 1-like [Cavia porcellus]
Length = 1143
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+A+F+ YK KY+ +L NL+DP+NPD V G V P +V M++ +
Sbjct: 565 IAADIEAALFDLMQGTTYRYKTKYRTLLFNLRDPRNPDLFLKVVHGNVTPHDLVRMSSVQ 624
Query: 206 MAGDKM 211
+A ++
Sbjct: 625 LASQEL 630
>gi|195437119|ref|XP_002066492.1| GK18066 [Drosophila willistoni]
gi|194162577|gb|EDW77478.1| GK18066 [Drosophila willistoni]
Length = 319
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ ++ D YK + ++ + NLKDPKNP R N G V + + MT +EMA D+M
Sbjct: 194 IYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEM 251
>gi|30689925|ref|NP_197934.2| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|26449758|dbj|BAC42002.1| putative PHD finger protein [Arabidopsis thaliana]
gi|332006074|gb|AED93457.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 735
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E +F+ + + YK K +++L NLKD NP+ R +V G++ PE + M
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418
Query: 202 TAKEMAGDKM 211
TA+E+A ++
Sbjct: 419 TAEELASKEL 428
>gi|195385615|ref|XP_002051500.1| TfIIS [Drosophila virilis]
gi|194147957|gb|EDW63655.1| TfIIS [Drosophila virilis]
Length = 324
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ ++ D YK + ++ + NLKDPKNP R N G V + + MT +EMA D+M
Sbjct: 199 IYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEM 256
>gi|449437376|ref|XP_004136468.1| PREDICTED: uncharacterized protein LOC101216628 [Cucumis sativus]
gi|449503562|ref|XP_004162064.1| PREDICTED: uncharacterized protein LOC101228635 [Cucumis sativus]
Length = 1124
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A+ +E +F+ + + YK K +++L NLKD NP+ R V G++ PE + MTA+E
Sbjct: 372 LALKIEEELFKLFSGVNKKYKEKGRSLLFNLKDRNNPELRERVMSGEITPERLCSMTAEE 431
Query: 206 MAGDKM 211
+A ++
Sbjct: 432 LASKEL 437
>gi|348510333|ref|XP_003442700.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Oreochromis niloticus]
Length = 2408
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N+ R+ +R + D L K ++D+ ++ + R+A A+E MF D YK
Sbjct: 734 NNQMRQNIRRSLTDILYKRVCDSDDL---KMTESEVGRLAFAIEKEMFNLCLSTDSKYKN 790
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEM 206
KY++++ NLKDPKN V G+V P +V ++A+E+
Sbjct: 791 KYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEEL 829
>gi|119627993|gb|EAX07588.1| SPOC domain containing 1, isoform CRA_c [Homo sapiens]
Length = 626
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V +A +E+A+++ +G YK KY+++L
Sbjct: 31 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 90
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V P +V M++ ++A ++
Sbjct: 91 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQEL 128
>gi|21749290|dbj|BAC03567.1| unnamed protein product [Homo sapiens]
Length = 696
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V +A +E+A+++ +G YK KY+++L
Sbjct: 101 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 160
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V P +V M++ ++A ++
Sbjct: 161 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQEL 198
>gi|170579780|ref|XP_001894980.1| transcription elongation factor S-II (TFIIS) [Brugia malayi]
gi|158598237|gb|EDP36172.1| transcription elongation factor S-II (TFIIS), putative [Brugia
malayi]
Length = 305
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +AI E +FE Y+ ++ + NL+D KN R NV +G V PE M
Sbjct: 168 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 227
Query: 202 TAKEMAGDKM 211
TA EMA D+M
Sbjct: 228 TADEMASDEM 237
>gi|432905920|ref|XP_004077476.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1575
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
+ R VR+ + D L++ E+D I E + VA E +F + D YK K
Sbjct: 625 EAIRRSVRDSLKDILTQRLKESDLHISVE----RASEVAKKTERELFHLFKDTDHKYKNK 680
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
Y++++ NLKD KN + V G++ P ++ M+ +E+A ++ + QR
Sbjct: 681 YRSLIFNLKDTKNNVLFKRVLKGEISPANLIRMSPEELASKELAAWRQR 729
>gi|8050580|gb|AAF71710.1|AF220261_1 transcription elongation factor TFIIS [Drosophila virilis]
Length = 324
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ ++ D YK + ++ + NLKDPKNP R N G V + + MT +EMA D+M
Sbjct: 199 IYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEM 256
>gi|332023706|gb|EGI63930.1| Transcription elongation factor S-II [Acromyrmex echinatior]
Length = 288
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ ++ D YK + ++ + NL+D KNP+ R N +G + P + MTA+EMA D++
Sbjct: 163 IYAEFKNTDSRYKNRVRSRVANLRDVKNPNLRTNFLVGAITPARLAVMTAEEMASDEI 220
>gi|33988379|gb|AAH07910.2| SPOCD1 protein, partial [Homo sapiens]
Length = 342
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 120 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDP 179
C L + D + +EV +A +E+A+++ +G YK KY+++L NL+DP
Sbjct: 16 CPGLHSLRELPDPVLSEEVVE----GIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDP 71
Query: 180 KNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+N D V G V P +V M++ ++A ++
Sbjct: 72 RNLDLFLKVVHGDVTPYDLVRMSSMQLAPQEL 103
>gi|119627992|gb|EAX07587.1| SPOC domain containing 1, isoform CRA_b [Homo sapiens]
Length = 644
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V +A +E+A+++ +G YK KY+++L
Sbjct: 36 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 95
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V P +V M++ ++A ++
Sbjct: 96 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQEL 133
>gi|225430091|ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267937 [Vitis vinifera]
Length = 1146
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+ +F+ + + YK K +++L NLKD NP+ R V G++ PE + MTA+E
Sbjct: 408 LAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMTAEE 467
Query: 206 MAGDKM 211
+A ++
Sbjct: 468 LASKEL 473
>gi|42573473|ref|NP_974833.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|332006075|gb|AED93458.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 997
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E +F+ + + YK K +++L NLKD NP+ R +V G++ PE + M
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418
Query: 202 TAKEMAGDKM 211
TA+E+A ++
Sbjct: 419 TAEELASKEL 428
>gi|307192626|gb|EFN75800.1| Transcription elongation factor S-II [Harpegnathos saltator]
Length = 278
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ ++ D YK + ++ + NL+D KNP+ R N +G + P + MTA+EMA D++
Sbjct: 153 IYAEFKNTDNRYKNRVRSRVANLRDVKNPNLRTNFIVGAITPARLAVMTAEEMASDEI 210
>gi|383847731|ref|XP_003699506.1| PREDICTED: transcription elongation factor S-II-like isoform 1
[Megachile rotundata]
Length = 312
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ ++ D YK + ++ + NL+D KNP+ R N G + P + MTA+EMA D++
Sbjct: 187 IYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITPARLAVMTAEEMASDEI 244
>gi|426222699|ref|XP_004005523.1| PREDICTED: SPOC domain-containing protein 1 [Ovis aries]
Length = 1255
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+A+F + YK KY+++L NL+DP+NP+ V G + P +V M++ +
Sbjct: 696 IAAGIEAALFNLTQATNSRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 755
Query: 206 MAGDKM 211
+A ++
Sbjct: 756 LAPQEL 761
>gi|397515906|ref|XP_003828182.1| PREDICTED: SPOC domain-containing protein 1 isoform 2 [Pan
paniscus]
Length = 1216
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V +A +E+A+++ +G YK KY+++L
Sbjct: 608 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 667
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V P +V M++ ++A ++
Sbjct: 668 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQEL 705
>gi|393904020|gb|EJD73631.1| transcription elongation factor S-II [Loa loa]
Length = 310
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A+ E +FE Y+ ++ + NL+D KN R NV +G V PE M
Sbjct: 173 DPEELAVRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 232
Query: 202 TAKEMAGDKM 211
TA EMA D+M
Sbjct: 233 TADEMASDEM 242
>gi|431894648|gb|ELK04448.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 269
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK + ++ + NLKD KNP RR V G + P+ I MT++EMA D++
Sbjct: 3 YKNRVRSRISNLKDAKNPGLRRQVLCGSITPQQIAVMTSEEMASDEL 49
>gi|47271475|ref|NP_653170.3| SPOC domain-containing protein 1 [Homo sapiens]
gi|74749560|sp|Q6ZMY3.1|SPOC1_HUMAN RecName: Full=SPOC domain-containing protein 1
gi|47077409|dbj|BAD18592.1| unnamed protein product [Homo sapiens]
Length = 1216
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V +A +E+A+++ +G YK KY+++L
Sbjct: 608 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 667
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V P +V M++ ++A ++
Sbjct: 668 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQEL 705
>gi|383847733|ref|XP_003699507.1| PREDICTED: transcription elongation factor S-II-like isoform 2
[Megachile rotundata]
Length = 311
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ ++ D YK + ++ + NL+D KNP+ R N G + P + MTA+EMA D++
Sbjct: 186 IYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITPARLAVMTAEEMASDEI 243
>gi|225710958|gb|ACO11325.1| Transcription elongation factor S-II [Caligus rogercresseyi]
Length = 299
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 17/134 (12%)
Query: 80 SSNVVRPESVVTEKTN--SSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDE 137
S N P+ V + TN ++D++ +RC + ++ L + + EE D
Sbjct: 113 SGNGPAPKGFVPKSTNIGTTDDVR---LRCREMISNALKGTTDAGLPDGTVKPPEEFGD- 168
Query: 138 VNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPET 197
+E A+F + YK + ++ + NL+D KNP R NV G + P
Sbjct: 169 -----------LIEEAIFSNFKSTSAKYKNQIRSRVFNLRDKKNPALRENVLTGIIDPPK 217
Query: 198 IVGMTAKEMAGDKM 211
MTA EMA D++
Sbjct: 218 FAVMTADEMASDEI 231
>gi|395856832|ref|XP_003800822.1| PREDICTED: SPOC domain-containing protein 1 [Otolemur garnettii]
Length = 1272
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
+R V A+ +V +E+ D V + V VA ++E+A+F+ + YK KY+++L
Sbjct: 677 IRGTVARAMQEVLWSRLQELPDLVLHEEVVESVAASIEAALFDLTQGTNCRYKTKYRSLL 736
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V P +V M++ ++A ++
Sbjct: 737 FNLRDPRNMDLFLKVVHGDVSPHDLVRMSSIQLAPQEL 774
>gi|168012823|ref|XP_001759101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689800|gb|EDQ76170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 90
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 170 KAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
++++ N+KD N DFRR + LG++KPE +V MT +MA ++
Sbjct: 1 RSIMFNVKDDTNLDFRRRILLGRIKPEAVVSMTFSDMASEQ 41
>gi|402588846|gb|EJW82779.1| hypothetical protein WUBG_06311 [Wuchereria bancrofti]
Length = 154
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +AI E +FE Y+ ++ + NL+D KN R NV +G V PE M
Sbjct: 17 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 76
Query: 202 TAKEMAGDKM 211
TA EMA D+M
Sbjct: 77 TADEMASDEM 86
>gi|397515904|ref|XP_003828181.1| PREDICTED: SPOC domain-containing protein 1 isoform 1 [Pan
paniscus]
Length = 1203
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V +A +E+A+++ +G YK KY+++L
Sbjct: 608 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 667
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V P +V M++ ++A ++
Sbjct: 668 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQEL 705
>gi|332808286|ref|XP_003307989.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Pan troglodytes]
Length = 1204
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V +A +E+A+++ +G YK KY+++L
Sbjct: 609 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 668
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V P +V M++ ++A ++
Sbjct: 669 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQEL 706
>gi|312088616|ref|XP_003145930.1| hypothetical protein LOAG_10358 [Loa loa]
Length = 241
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A+ E +FE Y+ ++ + NL+D KN R NV +G V PE M
Sbjct: 104 DPEELAVRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 163
Query: 202 TAKEMAGDKM 211
TA EMA D+M
Sbjct: 164 TADEMASDEM 173
>gi|89365915|gb|AAI14431.1| SPOCD1 protein [Homo sapiens]
Length = 1203
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V +A +E+A+++ +G YK KY+++L
Sbjct: 608 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 667
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V P +V M++ ++A ++
Sbjct: 668 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQEL 705
>gi|308808340|ref|XP_003081480.1| putative elongation factor (ISS) [Ostreococcus tauri]
gi|116059943|emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri]
Length = 126
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
M KW YK K + + N++DPKNPD R N+ +G++ + ++ +T +E+ ++
Sbjct: 1 MTAKWPEGGKDYKAKVRQLAFNMRDPKNPDLRTNLAMGEISADVLIDLTPEELGSNE 57
>gi|449544753|gb|EMD35725.1| hypothetical protein CERSUDRAFT_115683 [Ceriporiopsis subvermispora
B]
Length = 306
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ E + DAL+ SG E+I + A A+ES + +++ + YK K
Sbjct: 145 DKTRDKCAELIYDALAFDSGAPSEQI---------LSRAKAIESTVLSQFNGTNAEYKAK 195
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+++ NLKD NP R +V G + + M+++EMA +
Sbjct: 196 IRSLFVNLKDKNNPSLRESVVAGDLPVQRFCKMSSQEMASE 236
>gi|224143046|ref|XP_002324832.1| predicted protein [Populus trichocarpa]
gi|222866266|gb|EEF03397.1| predicted protein [Populus trichocarpa]
Length = 633
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 113 EVVREKVCDALSKVSGEA--DEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
E+ +K +A G+ DE + EV D +A +E+ +F+ + + YK K +
Sbjct: 250 EIAEKKEIEAAQTPHGQEHIDEYVGKEV-VRDPRVLASEIEAELFKLFGGVNKKYKEKGR 308
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++L NLKD NP+ R V G++ P + MTA+E+A ++
Sbjct: 309 SLLFNLKDRNNPELREKVMSGEIPPGRLCSMTAEELASKEL 349
>gi|242060932|ref|XP_002451755.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
gi|241931586|gb|EES04731.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
Length = 1087
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F+ + + YK K +++L NLKD NP+ R V G + PE + MTA+E
Sbjct: 341 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAEE 400
Query: 206 MAGDKM 211
+A ++
Sbjct: 401 LASKEL 406
>gi|212536338|ref|XP_002148325.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
gi|210070724|gb|EEA24814.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
Length = 296
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 147 AIALESAMFEKWDRYDGP-----YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
AIA+E+A F + GP YK K +++ NLK+ NP R+ V G V P+ V M
Sbjct: 164 AIAVEAAAFTSF----GPETKEQYKTKIRSLFQNLKNKSNPQLRQRVLSGDVTPDKFVNM 219
Query: 202 TAKEMAGD 209
T E+ D
Sbjct: 220 THDELKSD 227
>gi|444707355|gb|ELW48637.1| SPOC domain-containing protein 1 [Tupaia chinensis]
Length = 694
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETI 198
+A +E+A+F+ G YK KY+++L NL+DP+NPD V G V P +
Sbjct: 133 IAAGVEAALFDLTQGTQGRYKAKYRSLLFNLRDPRNPDLFLKVLHGDVTPHDL 185
>gi|198432582|ref|XP_002121512.1| PREDICTED: similar to death inducer-obliterator 1 [Ciona
intestinalis]
Length = 1728
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 111 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYK 170
R V++ + LSK S E+ E++R ++ R+ +E ++ + + + YK +Y+
Sbjct: 772 IRHNVKKSILGILSKRSEES-EDLR--MHPSSITRLVDKIEDSLHKLFGETNVKYKNRYR 828
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQ 216
+++ NLKD +N R V +G V +V MTA++MA K+ Q
Sbjct: 829 SIMFNLKDERNHGLWRKVIIGDVTTSELVQMTAEQMASKKLAEWRQ 874
>gi|115444961|ref|NP_001046260.1| Os02g0208600 [Oryza sativa Japonica Group]
gi|113535791|dbj|BAF08174.1| Os02g0208600, partial [Oryza sativa Japonica Group]
Length = 913
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 99 NLSRSMIRCNDCFREVVREKVCDALSKVSGEA-DEEIRDE---VNACDSVRVAIALESAM 154
NL RS R +D VV + + ++ SK A DEE D+ + D + A+ +E +
Sbjct: 301 NLKRS--RASD-IDPVVADTLSESESKRMKSANDEEAIDKDSIIQKADDL--AVRVEEEL 355
Query: 155 FEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
F+ + + YK K +++L NLKD NP+ R V G + P+ + MTA+E+A ++
Sbjct: 356 FKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEELASKEL 412
>gi|297808571|ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
gi|297318006|gb|EFH48428.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E +F+ + + YK K +++L NLKD NP+ R +V G++ PE + M
Sbjct: 353 DPELLASKIELELFKLFRGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 412
Query: 202 TAKEMAGDKM 211
TA+E+A ++
Sbjct: 413 TAEELASKEL 422
>gi|345566736|gb|EGX49678.1| hypothetical protein AOL_s00078g167 [Arthrobotrys oligospora ATCC
24927]
Length = 316
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
+ D Y+ K +++ NLKDPKNP R NV G+++P + M+++EMA
Sbjct: 197 KTDTAYRNKLRSLFFNLKDPKNPSLRNNVISGRIEPMRLALMSSEEMA 244
>gi|255582730|ref|XP_002532142.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223528178|gb|EEF30241.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 1154
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
VA +E+ ++ + + YK K +++L NLKD NP+ R V G++ PE + MTA+E
Sbjct: 394 VASTIEAELYNLFGGVNKKYKEKGRSLLFNLKDRNNPELRARVMSGEIPPEKLCSMTAEE 453
Query: 206 MAGDKM 211
+A ++
Sbjct: 454 LASKEL 459
>gi|441636142|ref|XP_003276474.2| PREDICTED: SPOC domain-containing protein 1 [Nomascus leucogenys]
Length = 1522
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 41/66 (62%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+A+++ +G YK KY+++L NL+DP+N D V G V P +V M++ +
Sbjct: 945 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 1004
Query: 206 MAGDKM 211
+A ++
Sbjct: 1005 LAPQEL 1010
>gi|291224586|ref|XP_002732285.1| PREDICTED: PHD finger protein 3-like [Saccoglossus kowalevskii]
Length = 1741
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
+V +E +F+ + YK KY+ ++ NLKD N R V G + P +VGMT++
Sbjct: 820 KVVNRIEHELFKLYQDTSSKYKAKYRTLMFNLKDVNNKGLFRRVLKGDISPSKLVGMTSE 879
Query: 205 EMAGDKMLSCYQR 217
+MA ++ +R
Sbjct: 880 QMACKELFEWRER 892
>gi|49387896|dbj|BAD24999.1| PHD finger protein-like [Oryza sativa Japonica Group]
gi|49387908|dbj|BAD25008.1| PHD finger protein-like [Oryza sativa Japonica Group]
Length = 1119
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 99 NLSRSMIRCNDCFREVVREKVCDALSKVSGEA-DEEIRDE---VNACDSVRVAIALESAM 154
NL RS R +D VV + + ++ SK A DEE D+ + D + A+ +E +
Sbjct: 301 NLKRS--RASD-IDPVVADTLSESESKRMKSANDEEAIDKDSIIQKADDL--AVRVEEEL 355
Query: 155 FEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
F+ + + YK K +++L NLKD NP+ R V G + P+ + MTA+E+A ++
Sbjct: 356 FKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEELASKEL 412
>gi|255730739|ref|XP_002550294.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
gi|240132251|gb|EER31809.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
Length = 312
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 144 VRVAIALESAMFE-KWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
+++A +ES +F+ ++ R D Y+ K ++ NL++ KNP+ R + Q+ + MT
Sbjct: 176 LKIATEIESEVFKSQYSRVDDTYRNKLRSFTMNLRNKKNPELRERILTKQITAAAFIKMT 235
Query: 203 AKEMAGDKM 211
KEMA + +
Sbjct: 236 PKEMAPEAL 244
>gi|444728032|gb|ELW68496.1| Zinc finger protein 436 [Tupaia chinensis]
Length = 763
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
D Y+ + ++ + NLKDP+NP RR V G + I MTA+EMA D++
Sbjct: 158 DMKYRNRVRSRISNLKDPRNPGLRRKVLSGAIAAGLIAKMTAEEMASDEL 207
>gi|115709498|ref|XP_797149.2| PREDICTED: uncharacterized protein LOC592539, partial
[Strongylocentrotus purpuratus]
Length = 403
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 124 SKVSGEADEEIR---------------------DEVNACDSVRVAIALESAMFEKWDRYD 162
SK++G+A E +R V A D RV+ +E +++ ++
Sbjct: 285 SKLAGQASESVRVNVKRTLLDVLLTRVKKAPDVKNVTADDVKRVSKQVEFELYKLFNDTG 344
Query: 163 GPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKML 212
YK KY+ ++ N+KD KN R++ G++ P +V M++ ++A +++
Sbjct: 345 AKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQELM 394
>gi|116283511|gb|AAH29069.1| SPOCD1 protein [Homo sapiens]
Length = 266
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 133 EIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLG 191
E+ D V + + V +A +E+A+++ +G YK KY+++L NL+DP+N D V G
Sbjct: 8 ELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHG 67
Query: 192 QVKPETIVGMTAKEMAGDKM 211
V P +V M++ ++A ++
Sbjct: 68 DVTPYDLVRMSSMQLAPQEL 87
>gi|321468633|gb|EFX79617.1| hypothetical protein DAPPUDRAFT_244816 [Daphnia pulex]
Length = 2274
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 112 REVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGP-YKIKYK 170
R + R + +AL EA++ DE +VA +E ++F + G YK KY+
Sbjct: 1709 RSISRSSLKEALWSRCKEANDVETDEAIV---EQVAKEIEESLFSLYKHDVGSKYKNKYR 1765
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
+++ N+KDPKNP R + Q+ P+ +V M+ +++A
Sbjct: 1766 SLIFNIKDPKNPGLFREIITKQLLPDELVKMSTEDLA 1802
>gi|225719828|gb|ACO15760.1| Transcription elongation factor A protein 1 [Caligus clemensi]
Length = 296
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 102 RSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDR 160
++ I D R RE + +AL K +G+ + I C S +A +E ++F
Sbjct: 125 KANINTTDDVRLRCREMITNAL-KGAGDLPDGI------CKSPEELADLIEESIFSSNKS 177
Query: 161 YDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK + ++ + NL+D KNP R NV G ++P MTA EMA D++
Sbjct: 178 TSAKYKNQIRSRVFNLRDKKNPALRENVLTGIIEPSKFAVMTADEMASDEV 228
>gi|297665702|ref|XP_002811186.1| PREDICTED: SPOC domain-containing protein 1 [Pongo abelii]
Length = 1158
Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 41/66 (62%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+A+++ +G YK KY+++L NL+DP+N D V G V P +V M++ +
Sbjct: 595 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGAVTPYDLVRMSSMQ 654
Query: 206 MAGDKM 211
+A ++
Sbjct: 655 LAPQEL 660
>gi|432866827|ref|XP_004070955.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1340
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 137 EVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPE 196
E++ + ++ +E+ MF+ + D Y KY+ ++ NLKDPKN V G++ P
Sbjct: 570 EMSESEVAKLVACIETEMFDIFRNTDSKYMNKYRTIMFNLKDPKNKGLLYRVVHGEIGPF 629
Query: 197 TIVGMTAKEM 206
+V M+ K+M
Sbjct: 630 RLVRMSQKDM 639
>gi|222622404|gb|EEE56536.1| hypothetical protein OsJ_05842 [Oryza sativa Japonica Group]
Length = 614
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A+ +E +F+ + + YK K +++L NLKD NP+ R V G + P+ + MTA+E
Sbjct: 22 LAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEE 81
Query: 206 MAGDKM 211
+A ++
Sbjct: 82 LASKEL 87
>gi|195478903|ref|XP_002100690.1| GE17201 [Drosophila yakuba]
gi|194188214|gb|EDX01798.1| GE17201 [Drosophila yakuba]
Length = 162
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A LE A++ + YK + ++ L NL+DPKNP R LG + E + MT +E
Sbjct: 32 MAAQLEEAIYVELKCCQVKYKNRIRSRLANLRDPKNPGLREKFLLGLIGVEKMARMTPEE 91
Query: 206 MAGDKM 211
MA D +
Sbjct: 92 MASDDL 97
>gi|348507274|ref|XP_003441181.1| PREDICTED: hypothetical protein LOC100699272 [Oreochromis
niloticus]
Length = 1691
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 40 GDIEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDN 99
G + P K + +++++ + G+ Q+ A SL+S +K S +
Sbjct: 642 GGVRPVKKDAERRQSTDAREAAHKTGVSMKQESKHKAPSLAS----------KKPVSLEA 691
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+ RS+ D +E++ +++ D+ +S E E+ A +E +F +
Sbjct: 692 IRRSV---RDSLKEILIQRLKDSDLNISVERASEL------------AKKIERELFHLYK 736
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
D YK KY++++ NLKD KN + V G++ P ++ M+ +E+A ++ + QR
Sbjct: 737 DTDNKYKNKYRSLMFNLKDTKNNILCKRVLKGEISPANLIRMSPEELASKELAAWRQR 794
>gi|357139063|ref|XP_003571105.1| PREDICTED: uncharacterized protein LOC100836963 [Brachypodium
distachyon]
Length = 1244
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR----VAIALESAMFEKWDRYDGPYKIKYK 170
V E + ++ SK ADE D V++ ++ +A+ +E +F+ + + YK + +
Sbjct: 316 VTESLAESGSKRMKSADEAAMD-VDSNSIIQKAESLALRIEEELFKLFGGVNKKYKERGR 374
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++L NLKD NP+ R V G + PE + MTA+E+A ++
Sbjct: 375 SLLFNLKDKSNPELRVRVLSGDIAPERLCSMTAEELASKEL 415
>gi|218190291|gb|EEC72718.1| hypothetical protein OsI_06323 [Oryza sativa Indica Group]
Length = 907
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A+ +E +F+ + + YK K +++L NLKD NP+ R V G + P+ + MTA+E
Sbjct: 22 LAVRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEE 81
Query: 206 MAGDKM 211
+A ++
Sbjct: 82 LASKEL 87
>gi|351704572|gb|EHB07491.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 741
Score = 45.4 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
L + ++ R+++R + + L K E+ + IR E + AI LE MF +
Sbjct: 225 LPKPSVQPESQLRQIIRHSLKEILWKRVCESGDLIRTENEVG---KTAIRLEEEMFNLFR 281
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNVHL-GQVKPETI 198
D Y+ KY++++ LKDP + D +H+ G++ P+T+
Sbjct: 282 VTDHRYRSKYRSIMLRLKDPASQDLPDTIHIGGRIAPKTV 321
>gi|324513389|gb|ADY45503.1| Transcription elongation factor S-II [Ascaris suum]
Length = 301
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +AI +E +FE Y+ ++ + NL+D KN R NV G V P M
Sbjct: 164 DPEELAIKIEKKLFEVHRGTGDKYRSAVRSRVFNLRDKKNAALRENVLTGVVTPAKFAVM 223
Query: 202 TAKEMAGDKMLS 213
T++EMA D+M S
Sbjct: 224 TSEEMASDEMRS 235
>gi|297823711|ref|XP_002879738.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
gi|297325577|gb|EFH55997.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 173 LGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
+ NL+D NPD RR V G++ PE ++ ++A+EMA DK
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDK 38
>gi|413936812|gb|AFW71363.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1082
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F+ + + YK K +++L NLKD NP+ R V G + PE + MTA+E
Sbjct: 344 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIVPERLCSMTAEE 403
Query: 206 MAGDKM 211
+A ++
Sbjct: 404 LASKEL 409
>gi|255083388|ref|XP_002504680.1| predicted protein [Micromonas sp. RCC299]
gi|226519948|gb|ACO65938.1| predicted protein [Micromonas sp. RCC299]
Length = 114
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
YK K + + NLKDPKNPD RR+V G + P+ ++ + +E+ D
Sbjct: 1 YKAKVRQLSFNLKDPKNPDLRRSVADGLISPKVLLDLKPEELGSD 45
>gi|297788910|ref|XP_002862485.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
gi|297308027|gb|EFH38743.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 173 LGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
+ NL+D NPD RR V G++ PE ++ ++A+EMA DK
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDK 38
>gi|302796655|ref|XP_002980089.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
gi|302811590|ref|XP_002987484.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300144890|gb|EFJ11571.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300152316|gb|EFJ18959.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
Length = 58
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK K ++++ NLKD NPD R V +G+V PE + MT +++A ++
Sbjct: 2 YKEKARSLVFNLKDKNNPDLRARVFVGEVSPEQLCSMTIEQLASKEL 48
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 108 NDCFREVVREKVCDALSKVSGEADE--EIRDEVNACDSVRVAIALESAMFEKWDRYDGPY 165
N R+ +R + D L K ++D+ +EV R+A A+E MF D Y
Sbjct: 654 NTQMRQNIRRSLTDILFKRVSDSDDLKMTENEVG-----RLAFAIEKEMFNLCLSTDSKY 708
Query: 166 KIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
K KY+ ++ +LKDPKN V G V P +V + A+E+ +M
Sbjct: 709 KNKYRTLMLHLKDPKNKGLFYKVMGGDVTPFRLVRLGAEELVSREM 754
>gi|413926158|gb|AFW66090.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1080
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F+ + + YK K +++L NLKD NP+ R V G + PE + MTA+E
Sbjct: 339 LAFRIEEELFKLFRGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAEE 398
Query: 206 MAGDKM 211
+A ++
Sbjct: 399 LASKEL 404
>gi|224092388|ref|XP_002309587.1| predicted protein [Populus trichocarpa]
gi|222855563|gb|EEE93110.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E+ +F+ + + YK K +++L NLKD NP+ R V G++ P + M
Sbjct: 390 DPQFLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRSNPELREKVMSGEITPGRLCSM 449
Query: 202 TAKEMAGDKM 211
TA+E+A ++
Sbjct: 450 TAEELASKEL 459
>gi|407929237|gb|EKG22072.1| Zinc finger TFIIS-type protein [Macrophomina phaseolina MS6]
Length = 302
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 146 VAIALESAMFEKWD-RYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
VA +E A + K+ PYK + +++ NLK+ NP R+ V G+++PE V M+++
Sbjct: 168 VAREVELAAYNKYQPETSAPYKERMRSLFQNLKNKSNPGLRKRVLAGEIRPEKFVTMSSE 227
Query: 205 EM 206
E+
Sbjct: 228 EL 229
>gi|401887634|gb|EJT51614.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 2479]
Length = 300
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 147 AIALESAMFEKWDRYDG-PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
AI +E F+ G Y+ K +++ N+KD NP R + LGQV P+ +V M+ +E
Sbjct: 178 AIGIEREAFKLLKFNSGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEE 237
Query: 206 MAGD 209
MA +
Sbjct: 238 MASE 241
>gi|301791824|ref|XP_002930880.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Ailuropoda melanoleuca]
Length = 285
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
++A +E ++E+ D Y + + NLKD +NP RRNV G + I MTA+
Sbjct: 169 KMASVIEDNIYEELKSMDMKYWNLVHSXIRNLKDXRNPSLRRNVLSGTISAGLIAKMTAE 228
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 229 EMACDEL 235
>gi|260949205|ref|XP_002618899.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
gi|238846471|gb|EEQ35935.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
Length = 309
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 144 VRVAIALESAMFE-KWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
+R+A +ES +F+ ++ + Y+ + + NL++ KNP+ R + GQ+ P + + MT
Sbjct: 173 LRIATEIESEVFKSEYSNVNDNYRNRLRTFTMNLRNKKNPELRARLLSGQITPSSFIKMT 232
Query: 203 AKEMAGDKM 211
EMA + +
Sbjct: 233 PNEMAPEAL 241
>gi|403341216|gb|EJY69907.1| Transcription elongation factor TFIIS [Oxytricha trifallax]
Length = 340
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 136 DEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKP 195
+E+ + ++ + +E +++ + R Y+ K ++++ NLKDPKNPD R ++ G ++P
Sbjct: 194 EEIVLTRAAQLGLQIEDELYKSFPRL-AEYQNKARSLMFNLKDPKNPDLRMSLIEGVIEP 252
Query: 196 ETIVGMTAKEMA 207
+V + +K +A
Sbjct: 253 NQLVRLDSKSLA 264
>gi|66361609|ref|XP_627328.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
gi|46228708|gb|EAK89578.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
Length = 332
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW----DRYDGP 164
D R+ R + A+ + ++ E C+ +A +ES + ++ D
Sbjct: 159 DVMRDKARHFLWKAMVTGVPYSQAKLMKESQVCE---IAAEIESVLHREYIVKGDNSVRD 215
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
Y ++ K + NL D KNP+ +++G++ PE I M ++EMA D
Sbjct: 216 YNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIARMQSREMASD 260
>gi|67588103|ref|XP_665338.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis
TU502]
gi|54655975|gb|EAL35108.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis]
Length = 332
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW----DRYDGP 164
D R+ R + A+ + ++ E C+ +A +ES + ++ D
Sbjct: 159 DVMRDKARHFLWKAMVTGVPYSQAKLMKESQVCE---IAAEIESVLHREYIVKGDNSVRD 215
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
Y ++ K + NL D KNP+ +++G++ PE I M ++EMA D
Sbjct: 216 YNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIARMQSREMASD 260
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 142 DSVR------VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKP 195
DSVR +A AL++ F+ + YK + ++ + NLKD KNP R V G V
Sbjct: 112 DSVREKCREMLANALKTDEFKNTEMK---YKTRVRSRIANLKDAKNPGLREKVLHGDVSA 168
Query: 196 ETIVGMTAKEMAGDKM 211
E + MTA+EMA +M
Sbjct: 169 EKMAKMTAEEMASPEM 184
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 142 DSVR------VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKP 195
DSVR +A AL++ F+ + YK + ++ + NLKD KNP R V G V
Sbjct: 361 DSVREKCREMLANALKTDEFKNTEMK---YKTRVRSRIANLKDAKNPGLREKVLHGDVSA 417
Query: 196 ETIVGMTAKEMAGDKM 211
E + MTA+EMA +M
Sbjct: 418 EKMAKMTAEEMASPEM 433
>gi|51968872|dbj|BAD43128.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 745
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+ +F+ + + YK K +++L NLKD NP R V G++ E + M+A+E
Sbjct: 319 LAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSMSAEE 378
Query: 206 MAGDKM 211
+A ++
Sbjct: 379 LASKEL 384
>gi|406699653|gb|EKD02852.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 8904]
Length = 317
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 147 AIALESAMFEKWDRYDG-PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
AI +E F+ G Y+ K +++ N+KD NP R + LGQV P+ +V M+ +E
Sbjct: 185 AIGIEREAFKLLKFNSGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEE 244
Query: 206 MAGD 209
MA +
Sbjct: 245 MASE 248
>gi|79563173|ref|NP_180135.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|330252635|gb|AEC07729.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 745
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+ +F+ + + YK K +++L NLKD NP R V G++ E + M+A+E
Sbjct: 319 LAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSMSAEE 378
Query: 206 MAGDKM 211
+A ++
Sbjct: 379 LASKEL 384
>gi|4874303|gb|AAD31365.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 643
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 141 CDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
D +A +E+ +F+ + + YK K +++L NLKD NP R V G++ E +
Sbjct: 263 LDPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCS 322
Query: 201 MTAKEMAGDKM 211
M+A+E+A ++
Sbjct: 323 MSAEELASKEL 333
>gi|384246623|gb|EIE20112.1| hypothetical protein COCSUDRAFT_67485 [Coccomyxa subellipsoidea
C-169]
Length = 1199
Score = 44.7 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 111 FREVVREKVCDALSKVSGEADEEIRDEVNACD---SVRVAIALESAMFEKWDRYDGPYKI 167
FRE R ++ ++L++ A EE++ + + D VA +E+ MF+ + + Y
Sbjct: 337 FREKQRREMKESLTR----ALEELKAKGHEGDLPAPDMVAQRIEATMFKHFGGVNKEYGA 392
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+ +++ NL D NPDFR V G ++P ++ M +EMA +
Sbjct: 393 RNRSIQFNLADKSNPDFRAKVLRGDLEPAKLMTMHTQEMASE 434
>gi|402853722|ref|XP_003891539.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Papio anubis]
Length = 1199
Score = 44.7 bits (104), Expect = 0.029, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V+ +A +E+A+++ +G YK KY+++L
Sbjct: 604 VRGTVVRSMQEVLWTRLRELPDSVLSEEVVKGIAAGIEAALWDLTQGTNGRYKTKYRSLL 663
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V +V M++ ++A ++
Sbjct: 664 FNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQLAPQEL 701
>gi|171424|gb|AAA34580.1| DST1 [Saccharomyces cerevisiae]
gi|172773|gb|AAA88734.1| DNA strand transferase alpha [Saccharomyces cerevisiae]
Length = 309
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 32/211 (15%)
Query: 2 KASSRKKIQDFASDLIVSWRNMSLEQMR---DERKGSYTIPGDIEPAKIEKVDKRTSEEC 58
K S+ +I +I SW+ ++ R ++ PG+ E DK T E
Sbjct: 54 KKSTNVEISKLVKKMISSWKAQLIKNKRCRQPQQHHQDHAPGNAE-------DKTTVGES 106
Query: 59 QEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREK 118
V V Q A+S S + + + V T+ NS ++ + I + +R++
Sbjct: 107 ----------VNGVQQPASSQSDAMKQDKYVSTKPRNSKNDGVDTAI-----YHHKLRDQ 151
Query: 119 VCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWDRYDGPYKIKYKAVLGNL 176
V AL V + E + + A A+ES M D + YK +Y+ + N+
Sbjct: 152 VLKALYDVLAKESEHPPQSI-----LHTAKAIESEMNKVNNCDTNEAAYKARYRIIYSNV 206
Query: 177 KDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
NPD + + G + PE + AK++A
Sbjct: 207 ISKNNPDLKHKIANGDITPEFLATCDAKDLA 237
>gi|213404362|ref|XP_002172953.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
gi|212001000|gb|EEB06660.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
Length = 698
Score = 44.3 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 70 QKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREV------VREKVCDAL 123
Q + QN+ +L S V S K S+ + +M R F + VR+ V A
Sbjct: 122 QDIVQNSDTLPSYVNNKRSKSNPKPTSTSAPTPAMDRDLQEFTNIEEIPNKVRQSVAKAW 181
Query: 124 SKVSGEADEEIRDE---VNACDSVRVAIALESAMF-EKWDRYDG------PYKIKYKAVL 173
E+ + E + D V A+ LE MF E + DG Y+ K++ +
Sbjct: 182 LSALKSMVEKCKTESANLKFPDLVEFALQLERTMFIELSYKIDGNAIPNKAYRDKFRNIK 241
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
NL D +NP R ++ G++ P +V MT++EMA
Sbjct: 242 FNLTDDRNPHLRASLFKGEITPVQLVHMTSEEMA 275
>gi|6321395|ref|NP_011472.1| Dst1p [Saccharomyces cerevisiae S288c]
gi|1729915|sp|P07273.4|TFS2_YEAST RecName: Full=Transcription elongation factor S-II; AltName:
Full=DNA strand transfer protein alpha; Short=STP-alpha;
AltName: Full=DNA strand transferase 1; AltName:
Full=Pyrimidine pathway regulatory protein 2
gi|34810565|pdb|1PQV|S Chain S, Rna Polymerase Ii-Tfiis Complex
gi|218517|dbj|BAA02046.1| transcriptional elongation factor S-II [Saccharomyces cerevisiae]
gi|1322528|emb|CAA96744.1| DST1 [Saccharomyces cerevisiae]
gi|151943248|gb|EDN61561.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
gi|190407007|gb|EDV10274.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
RM11-1a]
gi|256271330|gb|EEU06396.1| Dst1p [Saccharomyces cerevisiae JAY291]
gi|285812157|tpg|DAA08057.1| TPA: Dst1p [Saccharomyces cerevisiae S288c]
gi|323304905|gb|EGA58662.1| Dst1p [Saccharomyces cerevisiae FostersB]
gi|323309085|gb|EGA62313.1| Dst1p [Saccharomyces cerevisiae FostersO]
gi|323337623|gb|EGA78868.1| Dst1p [Saccharomyces cerevisiae Vin13]
gi|323348527|gb|EGA82771.1| Dst1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354949|gb|EGA86780.1| Dst1p [Saccharomyces cerevisiae VL3]
gi|349578179|dbj|GAA23345.1| K7_Dst1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765583|gb|EHN07090.1| Dst1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299216|gb|EIW10310.1| Dst1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 309
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 32/211 (15%)
Query: 2 KASSRKKIQDFASDLIVSWRNMSLEQMRDERKGSYT---IPGDIEPAKIEKVDKRTSEEC 58
K S+ +I +I SW++ + R + + PG+ E DK T E
Sbjct: 54 KKSTNVEISKLVKKMISSWKDAINKNKRSRQAQQHHQDHAPGNAE-------DKTTVGES 106
Query: 59 QEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREK 118
V V Q A+S S + + + V T+ NS ++ + I + +R++
Sbjct: 107 ----------VNGVQQPASSQSDAMKQDKYVSTKPRNSKNDGVDTAI-----YHHKLRDQ 151
Query: 119 VCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWDRYDGPYKIKYKAVLGNL 176
V AL V + E + + A A+ES M D + YK +Y+ + N+
Sbjct: 152 VLKALYDVLAKESEHPPQSI-----LHTAKAIESEMNKVNNCDTNEAAYKARYRIIYSNV 206
Query: 177 KDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
NPD + + G + PE + AK++A
Sbjct: 207 ISKNNPDLKHKIANGDITPEFLATCDAKDLA 237
>gi|427780239|gb|JAA55571.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2067
Score = 44.3 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
Query: 87 ESVVTEKTNSSDNLSRSMIRCNDCFREVVREKV---CDALSKVSGEADEEIRDEVNACDS 143
E+V K S +R N R+V+R+ + C S +S DE +R
Sbjct: 967 EAVTEVKKTEPAQPSIEPVRLN--VRKVLRDALLNRCKEASDLSLSGDE-VR-------- 1015
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
R+A+ +E +F+ + YK KY++++ N+KD +N R + G++ P+ +V MT
Sbjct: 1016 -RMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTP 1074
Query: 204 KEMAGDKM 211
+E+A ++
Sbjct: 1075 EELASKEL 1082
>gi|47229319|emb|CAG04071.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3036
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N+ R+ +++ + L K G+ ++ E + V++ ++E MF + D Y
Sbjct: 2109 NNQIRQSIQKSLVSILVKRVGDCEDLKTSE---SEVVKLVASIEVEMFNIFRNTDSKYMN 2165
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEM 206
KY+ ++ NLKDP+N G++ P +V MT K+M
Sbjct: 2166 KYRTIMFNLKDPRNKGLLYGFVRGEISPFRLVRMTQKDM 2204
>gi|344253671|gb|EGW09775.1| Transcription elongation factor A protein 1 [Cricetulus griseus]
Length = 278
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++++ D YK + ++ + KD KNP+ R+NV G + P+ MTA+EMA D++
Sbjct: 153 IYQEIRNTDMKYKNRVRSRISVPKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL 210
>gi|384484057|gb|EIE76237.1| transcription elongation factor S-II [Rhizopus delemar RA 99-880]
Length = 304
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%)
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
++ A+A+E+ +F+++ + YK K + + NLK NP R +V G++ E + M+
Sbjct: 169 LKRALAIETRIFDEYGSVNEGYKSKVRTLANNLKSKSNPGLRESVVSGELTIEKLCTMSV 228
Query: 204 KEMAGD 209
+EMA +
Sbjct: 229 EEMASE 234
>gi|427788339|gb|JAA59621.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2019
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
Query: 87 ESVVTEKTNSSDNLSRSMIRCNDCFREVVREKV---CDALSKVSGEADEEIRDEVNACDS 143
E+V K S +R N R+V+R+ + C S +S DE +R
Sbjct: 955 EAVTEVKKTEPAQPSIEPVRLN--VRKVLRDALLNRCKEASDLSLSGDE-VR-------- 1003
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
R+A+ +E +F+ + YK KY++++ N+KD +N R + G++ P+ +V MT
Sbjct: 1004 -RMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTP 1062
Query: 204 KEMAGDKM 211
+E+A ++
Sbjct: 1063 EELASKEL 1070
>gi|427788337|gb|JAA59620.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2031
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
Query: 87 ESVVTEKTNSSDNLSRSMIRCNDCFREVVREKV---CDALSKVSGEADEEIRDEVNACDS 143
E+V K S +R N R+V+R+ + C S +S DE +R
Sbjct: 967 EAVTEVKKTEPAQPSIEPVRLN--VRKVLRDALLNRCKEASDLSLSGDE-VR-------- 1015
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
R+A+ +E +F+ + YK KY++++ N+KD +N R + G++ P+ +V MT
Sbjct: 1016 -RMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTP 1074
Query: 204 KEMAGDKM 211
+E+A ++
Sbjct: 1075 EELASKEL 1082
>gi|440800297|gb|ELR21336.1| transcription factor sii (tfiis), central domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 653
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 107 CNDCFREVVREKV----CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD-RY 161
C++ R VRE+V +ALS E R V+A +A +E+ M+ ++ +
Sbjct: 225 CDETTR-AVRERVVASLAEALSMPRPATAENERSVVDAAAVQALAEGIETEMWRMFELQT 283
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
YK K++ +L NLKD +N + R +V G++ P + T+KE+A
Sbjct: 284 SSAYKAKFRTLLFNLKDERNQELRESVLSGEMAPAELCKKTSKELA 329
>gi|340376666|ref|XP_003386853.1| PREDICTED: transcription elongation factor A protein 2-like
[Amphimedon queenslandica]
Length = 314
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 136 DEVNACDSVRV---AIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQ 192
+EVN D R+ + A+E +F ++ + YK + ++ + N+ D KNP ++ + G+
Sbjct: 168 NEVNIEDDTRLYNLSAAIEDQIFSEFKDTNMKYKNRVRSRVSNIGDLKNPGLKQKIISGE 227
Query: 193 VKPETIVGMTAKEMAGDKM 211
+ P I M+ +EMA + M
Sbjct: 228 ISPARIAKMSTEEMASEDM 246
>gi|207345303|gb|EDZ72168.1| YGL043Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323333438|gb|EGA74832.1| Dst1p [Saccharomyces cerevisiae AWRI796]
Length = 242
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 12/141 (8%)
Query: 69 VQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSG 128
V V Q A+S S + + + V T+ NS ++ + I + +R++V AL V
Sbjct: 40 VNGVQQPASSQSDAMKQDKYVSTKPRNSKNDGVDTAI-----YHHKLRDQVLKALYDVLA 94
Query: 129 EADEEIRDEVNACDSVRVAIALESAM--FEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRR 186
+ E + + A A+ES M D + YK +Y+ + N+ NPD +
Sbjct: 95 KESEHPPQSI-----LHTAKAIESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKH 149
Query: 187 NVHLGQVKPETIVGMTAKEMA 207
+ G + PE + AK++A
Sbjct: 150 KIANGDITPEFLATCDAKDLA 170
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 94 TNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESA 153
T S S + N R+ +R + + L K ++D+ I E ++A+ +E
Sbjct: 691 TTGKSGASPSQSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKE 747
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLS 213
MF + D YK KY++++ NLKDPKN V ++ +V M +E+ K LS
Sbjct: 748 MFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELV-SKELS 806
Query: 214 CYQ 216
++
Sbjct: 807 MWK 809
>gi|355745090|gb|EHH49715.1| hypothetical protein EGM_00425 [Macaca fascicularis]
Length = 1212
Score = 43.9 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V+ +A +E+A+++ +G YK KY+++L
Sbjct: 604 VRGTVVHSMQEVLWTRLRELPDLVLSEEVVKGIAAGIEAALWDLTQGTNGRYKTKYRSLL 663
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V +V M++ ++A ++
Sbjct: 664 FNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQLAPQEL 701
>gi|355557769|gb|EHH14549.1| hypothetical protein EGK_00493 [Macaca mulatta]
Length = 1212
Score = 43.9 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V+ +A +E+A+++ +G YK KY+++L
Sbjct: 604 VRGTVVHSMQEVLWTRLRELPDLVLSEEVVKGIAAGIEAALWDLTQGTNGRYKTKYRSLL 663
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V +V M++ ++A ++
Sbjct: 664 FNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQLAPQEL 701
>gi|410901489|ref|XP_003964228.1| PREDICTED: PHD finger protein 3-like [Takifugu rubripes]
Length = 1448
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%)
Query: 113 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAV 172
E +R V D+L ++ + +E ++ + VA +E +F D YK KY+++
Sbjct: 654 EAIRRSVRDSLKEILIQRLKESNLSISVEKASDVAKKIERELFHLNKDTDNKYKNKYRSL 713
Query: 173 LGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
+ NLKD KN + V G++ P ++ M+ +E+A ++ + +R
Sbjct: 714 MFNLKDTKNNVLYKKVLKGEISPGNLIRMSPEELASKELAAWRKR 758
>gi|451849746|gb|EMD63049.1| hypothetical protein COCSADRAFT_182336 [Cochliobolus sativus
ND90Pr]
Length = 306
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 30/201 (14%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISGVGIVK 68
+Q A++L+ WR+ ++ ++ G PAK+ + S SG
Sbjct: 66 VQKLATELVAKWRDEVKKKQPPKKDG---------PAKVATSNGSASSPAPPPSGT---- 112
Query: 69 VQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSG 128
A+ S + V ++K N + + + N+ VR + D L+ +S
Sbjct: 113 -------ASPAPSQSKKKHDVPSDKRNHKTDKVKYQVTGNEARDNCVRL-MYDGLAFMS- 163
Query: 129 EADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNV 188
E + DE+ + +A +E+A + + YK K +++ NLK+ NP R+ V
Sbjct: 164 ---EAMPDEI-----LNIAKHVEAAAYSNAGSVNDAYKGKMRSLFQNLKNKSNPQLRKRV 215
Query: 189 HLGQVKPETIVGMTAKEMAGD 209
G++ + V MT EM D
Sbjct: 216 LTGEITAKRFVVMTHDEMKSD 236
>gi|297821975|ref|XP_002878870.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
gi|297324709|gb|EFH55129.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+ +F+ + + YK K +++L N KD NP R V G++ E + M+A+E
Sbjct: 300 LAFEIEAELFKLFGGVNKKYKEKGRSLLFNFKDKSNPKLREKVMYGEIAAERLCSMSAEE 359
Query: 206 MAGDKM 211
+A ++
Sbjct: 360 LASKEL 365
>gi|355683932|gb|AER97239.1| death inducer-obliterator 1 [Mustela putorius furo]
Length = 804
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYD 162
++ + N R+ +R + + L K ++D+ I E + ++A+ +E MF + D
Sbjct: 655 ALSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE---SEVGKIALHIEKEMFNLFQVTD 711
Query: 163 GPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
YK +Y++++ NLKDPKN V ++ +V M +E+A ++ + +R
Sbjct: 712 NRYKSRYRSIMFNLKDPKNQGLFHRVLREEISSAKLVRMKPEELASKELSTWRER 766
>gi|390339426|ref|XP_780718.3| PREDICTED: uncharacterized protein LOC575208 [Strongylocentrotus
purpuratus]
Length = 2433
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%)
Query: 138 VNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPET 197
V A D RV+ +E +++ ++ YK KY+ ++ N+KD KN R++ G++ P
Sbjct: 1291 VTADDVKRVSKQVEFELYKLFNDTGAKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRN 1350
Query: 198 IVGMTAKEMAGDKML 212
+V M++ ++A +++
Sbjct: 1351 LVRMSSDQLASQELM 1365
>gi|241063664|ref|XP_002408196.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
gi|215492398|gb|EEC02039.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
Length = 1507
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 115 VREKVCDALSKVSGEADE--EIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAV 172
VR+ + D+LS +AD+ DEV R+A+ +E +F+ + YK KY+++
Sbjct: 816 VRKVLRDSLSNRCKDADDISLSGDEVK-----RMAVRIEEELFKYFKDTGTKYKSKYRSL 870
Query: 173 LGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
+ N+KD +N R + G++ P+ +V MT +E+A ++ +R
Sbjct: 871 VFNIKDTRNQGLFRKILKGKIAPDKLVRMTPEELASKELAKWRER 915
>gi|383422683|gb|AFH34555.1| SPOC domain-containing protein 1 [Macaca mulatta]
Length = 1199
Score = 43.5 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V ++ +V E+ D V + + V+ +A +E+A+++ +G YK KY+++L
Sbjct: 604 VRGTVVHSMQEVLWTRLRELPDLVLSEEVVKGIAAGIEAALWDLTQGTNGRYKTKYRSLL 663
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL+DP+N D V G V +V M++ ++A ++
Sbjct: 664 FNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQLAPQEL 701
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 94 TNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESA 153
T S S + N R+ +R + + L K ++D+ I E ++A+ +E
Sbjct: 689 TPGKSGASPSQSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKE 745
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLS 213
MF + D YK KY++++ NLKDPKN V ++ +V M +E+ K LS
Sbjct: 746 MFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELV-SKELS 804
Query: 214 CYQ 216
++
Sbjct: 805 TWK 807
>gi|443915704|gb|ELU37060.1| transcription factor s-II (TFIIS), central domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 377
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 15/217 (6%)
Query: 1 CKASSRKKIQDFASDLIVSWRNMSLEQMRDERK--GSYTIPGDIEPAKIEKVDKRTSEEC 58
++ RK+I D A +L+ W+ ++E + + G+ + P P+ + +
Sbjct: 55 LRSHPRKEIADLAKELVKKWKE-AVEAGKKVKAAGGTPSTPSTATPSGKPTPPPAATSQP 113
Query: 59 QEISGVGI---VKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRC---NDCFR 112
+ I + Q V A S ++ ++ ++N + ++ D R
Sbjct: 114 TKPQPSPIDPPSRKQSVSTTAASTPTSSKPTPTLKQPQSNVVRTVKNDAVKIESKGDKTR 173
Query: 113 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAV 172
+ E + DA++ SG R+ + RV A+E +++++D Y K + +
Sbjct: 174 DKCMELLYDAMASDSG-----ARESTHLIILKRV-YAIEYQVYKEFDGVTKEYSTKMRRL 227
Query: 173 LGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
NLKD KNP R V G + E V MT +EMA +
Sbjct: 228 FNNLKDKKNPGLREAVVSGDISAEKFVKMTPEEMASE 264
>gi|407261229|ref|XP_003086425.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 1090
Score = 43.5 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V A+ +V +E+ D D V +A +E A+F + YK KY+++L
Sbjct: 485 VRSTVVRAMQEVLWTRAQELPDLALREDEVEAIAEGIEEALFHLTQDTNLRYKNKYRSLL 544
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
NL+DP+N D V V P +V M++ ++A
Sbjct: 545 FNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLA 578
>gi|344306328|ref|XP_003421840.1| PREDICTED: death-inducer obliterator 1 [Loxodonta africana]
Length = 2247
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E RVA+ +E MF + D YK
Sbjct: 673 NSQIRQNIRRSLKEILWKRVSDSDDLIMTENEVG---RVALRIEKEMFSLFQVTDNRYKS 729
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
KY++++ NLKDPKN V ++ +V M +E+A ++ + +R
Sbjct: 730 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELASKELSTWKER 779
>gi|431894600|gb|ELK04400.1| Death-inducer obliterator 1 [Pteropus alecto]
Length = 1849
Score = 43.5 bits (101), Expect = 0.062, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E + RVA+ +E +F + D YK
Sbjct: 632 NSQIRQNIRRSLKEILWKRVSDSDDLIMTE---SEVGRVALRIEKELFNLFRVTDNRYKS 688
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY++++ NLKDPKN V ++ +V M +E+ ++
Sbjct: 689 KYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 732
>gi|363755550|ref|XP_003647990.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892026|gb|AET41173.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
Length = 306
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW--DRYDGPY 165
ND R++V + DAL+K S + I + +AI +E M++ D Y
Sbjct: 142 NDKLRDMVIKAFYDALAKQSEHPPQSI---------LAIAIDIEKHMYKLKIPAENDKGY 192
Query: 166 KIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
K KY+ + N+ NPD + + G + P+ +V KE+A + +
Sbjct: 193 KDKYRVIYSNVISKNNPDLKHKITNGDISPDYLVNCDPKELAPEHL 238
>gi|407263151|ref|XP_003085477.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 843
Score = 43.1 bits (100), Expect = 0.067, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V A+ +V +E+ D D V +A +E A+F + YK KY+++L
Sbjct: 238 VRSTVVRAMQEVLWTRAQELPDLALREDEVEAIAEGIEEALFHLTQDTNLRYKNKYRSLL 297
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
NL+DP+N D V V P +V M++ ++A
Sbjct: 298 FNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLA 331
>gi|169602463|ref|XP_001794653.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
gi|111066873|gb|EAT87993.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D + VA +E+A + + YK K +++ NLK+ NP R++V G+++P+ V M
Sbjct: 164 DIITVAKHVEAAAYGNAGSVNDAYKQKMRSLFQNLKNKSNPALRKDVLSGKIQPKKFVVM 223
Query: 202 TAKEMAGD 209
+ EM D
Sbjct: 224 SHDEMKSD 231
>gi|407264578|ref|XP_003945793.1| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 883
Score = 43.1 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V A+ +V +E+ D D V +A +E A+F + YK KY+++L
Sbjct: 278 VRSTVVRAMQEVLWTRAQELPDLALREDEVEAIAEGIEEALFHLTQDTNLRYKNKYRSLL 337
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
NL+DP+N D V V P +V M++ ++A
Sbjct: 338 FNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLA 371
>gi|432094051|gb|ELK25843.1| Death-inducer obliterator 1 [Myotis davidii]
Length = 1848
Score = 43.1 bits (100), Expect = 0.080, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K + ++D+ + E + +VA +E MF + D YK
Sbjct: 306 NSQIRQNIRRSLKEILWKRASDSDDLMMTE---SEVGKVAFHIEKEMFNLFHVTDNRYKS 362
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
KY++++ NLKDPKN L Q +T V A
Sbjct: 363 KYRSIMFNLKDPKNQVMESRARLHQESKKTAVRQEA 398
>gi|242025624|ref|XP_002433224.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518765|gb|EEB20486.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 2246
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 115 VREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKW-DRYDGPYKIKYKAV 172
+RE V L++ +E +D E N ++I +E +F+ + ++ D YK KY+++
Sbjct: 1122 IRESVKKTLAETLKVRVQECKDMEYNEEHIDNLSIKIEEKLFKHFENKVDTKYKSKYRSL 1181
Query: 173 LGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ N+KDPKN + + + P+ +V ++ +E+A ++
Sbjct: 1182 IFNIKDPKNETLYKKIVDNLISPKDLVKLSPEELASQEL 1220
>gi|322786324|gb|EFZ12874.1| hypothetical protein SINV_06958 [Solenopsis invicta]
Length = 113
Score = 43.1 bits (100), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 167 IKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
++ ++ + NL+D KNP+ R N +G + P + MTA+EMA D++
Sbjct: 1 MQVRSRVANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEI 45
>gi|410953420|ref|XP_003983369.1| PREDICTED: death-inducer obliterator 1 [Felis catus]
Length = 2093
Score = 42.7 bits (99), Expect = 0.088, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 101 SRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDR 160
S ++ + N R+ +R + + L K ++D+ I E ++A+ +E +F +
Sbjct: 659 SPALSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKELFNLFQV 715
Query: 161 YDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
D YK KY++++ NLKDPKN V ++ +V M +E+ ++ + +R
Sbjct: 716 TDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTWRER 772
>gi|380804173|gb|AFE73962.1| death-inducer obliterator 1 isoform b, partial [Macaca mulatta]
Length = 243
Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 31 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 87
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
D YK KY++++ NLKDPKN V ++ +V + +E+ ++ + +R
Sbjct: 88 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKER 145
>gi|321260424|ref|XP_003194932.1| positive transcription elongation factor [Cryptococcus gattii
WM276]
gi|317461404|gb|ADV23145.1| positive transcription elongation factor, putative [Cryptococcus
gattii WM276]
Length = 333
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 26/217 (11%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYTIPG-DIEPAKIEKVDKRTSEECQEISGVGIV 67
+ + A +++ WR+ ++E+ + +RK + G D++ K E KR E +
Sbjct: 63 VSNLAKEIVKKWRD-AVEESKKKRKRAEGDEGKDVKKEKEEGNGKRVKAESIHVYFAA-- 119
Query: 68 KVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALS--- 124
+++++ + P SV T ++ +R + D R R D ++
Sbjct: 120 -------GSSAVTPSASTPASVSTPDVKATSPPARQPLSTIDSSRTTPRTAKSDGMTDSL 172
Query: 125 ---KVSGEADEEIRD-------EVNACDSV-RVAIALESAMFEKWDRYDG-PYKIKYKAV 172
G + + +RD + A DS AI +E A + + G Y+ K +++
Sbjct: 173 KADSSEGGSVDSVRDKCVVMIYDALALDSTAERAIGIERAANKSMNFSTGNDYRAKMRSL 232
Query: 173 LGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
NLKD NP R + LG + E + M+ EMA +
Sbjct: 233 FLNLKDKGNPALRNEIVLGYISTEKVASMSKDEMASE 269
>gi|313225202|emb|CBY20996.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 135 RDEVNACDSVRVAIALESAM--FEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQ 192
+D+ N +A +E A+ F D Y+ K ++ NLKD KNPD R +V G
Sbjct: 149 KDKFNPQFVSLMAAKIEEAIYNFHGNSSSDTKYRNKIRSRYSNLKDAKNPDLRDSVMTGV 208
Query: 193 VKPETIVGMTAKEMAGDKM 211
+ P+ + M +EMA ++
Sbjct: 209 ISPDKLASMKPEEMASKQL 227
>gi|171687673|ref|XP_001908777.1| hypothetical protein [Podospora anserina S mat+]
gi|170943798|emb|CAP69450.1| unnamed protein product [Podospora anserina S mat+]
Length = 295
Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
VR+A+ +E+A F + Y+ K + ++ +LK NP + V G + P+T V MT
Sbjct: 160 VRLAMEVEAAAFRVFKGDTPEYRQKIRGLMTSLKRKDNPALGKRVRSGAITPDTFVKMTD 219
Query: 204 KEMAGD 209
E+A D
Sbjct: 220 VELASD 225
>gi|166796454|gb|AAI59331.1| Unknown (protein for IMAGE:8927043) [Xenopus (Silurana) tropicalis]
Length = 1162
Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 80 SSNVVRPESVVTEKTNSSDNLSRSM-IRCN--DCFREVVREKVCDALSKVSGEADEEIRD 136
++N +P S + SS + +M IR N ++++ ++V D+ V + +
Sbjct: 591 TANTSQPTSSTPQSAQSSSHPVPNMQIRQNIRRSLKQILWKRVIDSDDLVM------VEN 644
Query: 137 EVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPE 196
EV R+A +E MF + D YK KY+ ++ NLKDPKN V ++
Sbjct: 645 EV-----ARIATNIEREMFNLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLA 699
Query: 197 TIVGMTAKEMAGDKMLS 213
+V + +E+A K+ S
Sbjct: 700 KLVRLKPEELASRKLSS 716
>gi|76154247|gb|AAX25738.2| SJCHGC09202 protein [Schistosoma japonicum]
Length = 229
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 92 EKTNSSDNLSRSM-----IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRV 146
E T S N SR + ND R RE + AL SG A +S +
Sbjct: 133 EPTEPSGNASRGFFPVHTLTTNDQVRLKAREMLQSALE--SGNIPS------GAYESEFL 184
Query: 147 AIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLG 191
AI +ES++++ ++ D YK + + + NL+D NP+ R NV +G
Sbjct: 185 AIRIESSIYDLFNNTDPQYKQRVRTRVMNLRDSNNPNLRLNVLMG 229
>gi|344245025|gb|EGW01129.1| SPOC domain-containing protein 1 [Cricetulus griseus]
Length = 928
Score = 42.7 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V + +V +E+ D + + +A +E+A+F + YK KY+++L
Sbjct: 355 VRSTVVRTMQEVLWTRVQELPDLPLRKEEVASIAEDIEAALFHLTQDTNLRYKTKYRSLL 414
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
NLKDP+N D V V P+ +V M++ ++A
Sbjct: 415 FNLKDPRNSDLILKVAQCDVSPQDLVQMSSIQLA 448
>gi|354472422|ref|XP_003498438.1| PREDICTED: SPOC domain-containing protein 1-like [Cricetulus
griseus]
Length = 971
Score = 42.7 bits (99), Expect = 0.094, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 115 VREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V + +V +E+ D + + +A +E+A+F + YK KY+++L
Sbjct: 356 VRSTVVRTMQEVLWTRVQELPDLPLRKEEVASIAEDIEAALFHLTQDTNLRYKTKYRSLL 415
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
NLKDP+N D V V P+ +V M++ ++A
Sbjct: 416 FNLKDPRNSDLILKVAQCDVSPQDLVQMSSIQLA 449
>gi|195391634|ref|XP_002054465.1| GJ24469 [Drosophila virilis]
gi|194152551|gb|EDW67985.1| GJ24469 [Drosophila virilis]
Length = 2055
Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 86 PESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKV-SGEADEEIRDEVNACDSV 144
PE TE+ S N IR N R ++E++ + + + E E D + A +
Sbjct: 1288 PEKSSTERPVS--NSQPEPIRFN--VRRTLKEQLLSRIKEAQAAELPTEKSDWLTAAEVE 1343
Query: 145 RVAIALESAMFEKWDR-YDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
+ES M+ + R YK KY++++ N+KD KN + QV+P+ +V MT
Sbjct: 1344 NFVKRVESEMYHSFGRDVSAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTP 1403
Query: 204 KEMAGDKM 211
E+A ++
Sbjct: 1404 AELASQEL 1411
>gi|327271898|ref|XP_003220724.1| PREDICTED: death-inducer obliterator 1-like [Anolis carolinensis]
Length = 2331
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 96 SSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMF 155
SS N S+S + N R+ +R + + L K ++D+ + E + ++A+ +E MF
Sbjct: 819 SSVNASQS--QPNSQIRQNIRRSLKEILWKRVNDSDDLVMTE---SEVGKIALNIEKEMF 873
Query: 156 EKWDRYDGPYKIKYKAVLGNLKDPKN 181
+ D YK KY++++ NLKDPKN
Sbjct: 874 NLFHATDNRYKSKYRSIMFNLKDPKN 899
>gi|444520653|gb|ELV13035.1| PHD finger protein 3 [Tupaia chinensis]
Length = 1690
Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIK 168
D R+ VR + D L K +++ ++ +E A +VA +E +F + D YK K
Sbjct: 640 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 695
Query: 169 YKAVLGNLKDPKN 181
Y++++ NLKDPKN
Sbjct: 696 YRSLMFNLKDPKN 708
>gi|302833984|ref|XP_002948555.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
gi|300266242|gb|EFJ50430.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
Length = 1482
Score = 42.7 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDR-YDGPYK 166
+D R VRE++ AL + E E E D VA +E+ +++ D YK
Sbjct: 404 DDEVRSKVREQLASALQRALDELKAEGYTEALP-DPAAVAADVETELYKLHDNSVSKDYK 462
Query: 167 IKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
K++++ NL+D NP+ R V G++ P +V + E+A ++ Q+
Sbjct: 463 AKFRSLSFNLRDNGNPELRARVLRGELPPPRLVTLGPAELARKELSEWRQK 513
>gi|336369371|gb|EGN97713.1| hypothetical protein SERLA73DRAFT_184533 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382153|gb|EGO23304.1| hypothetical protein SERLADRAFT_472264 [Serpula lacrymans var.
lacrymans S7.9]
Length = 298
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGP---Y 165
D R+ E + DAL+ SG E+I A +S VA ++ GP Y
Sbjct: 137 DKTRDKCMELIYDALACDSGAPSEQILGRARAIESAVVA------------QFSGPSVEY 184
Query: 166 KIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
K K +++ NLKD NP R ++ G + E M++ EMA +
Sbjct: 185 KSKIRSLFVNLKDKNNPGLRESIVSGDLSVEKFGKMSSAEMASE 228
>gi|313221451|emb|CBY32201.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 146 VAIALESAM--FEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
+A +E A+ F D Y+ K ++ NLKD KNPD R +V G + P+ + M
Sbjct: 160 MAAKIEEAIYNFHGNSSSDTKYRNKIRSRYSNLKDAKNPDLRDSVMTGVISPDKLASMKP 219
Query: 204 KEMAGDKM 211
+EMA ++
Sbjct: 220 EEMASKQL 227
>gi|427779725|gb|JAA55314.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1186
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
Query: 87 ESVVTEKTNSSDNLSRSMIRCNDCFREVVREKV---CDALSKVSGEADEEIRDEVNACDS 143
E+V K S +R N R+V+R+ + C S +S DE +R
Sbjct: 999 EAVTEVKKTEPAQPSIEPVRLN--VRKVLRDALLNRCKEASDLSLSGDE-VR-------- 1047
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
R+A+ +E +F+ + YK KY++++ N+KD +N R + G++ P+ +V MT
Sbjct: 1048 -RMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTP 1106
Query: 204 KEMAGDKM 211
+E+A ++
Sbjct: 1107 EELASKEL 1114
>gi|224042778|ref|XP_002197835.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Taeniopygia
guttata]
Length = 360
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 135 RDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVK 194
+DE + +A +E +F + D YK ++ + NLK+PK+ + N+ G +
Sbjct: 199 KDEEETGKWLELAKEIEEHIFALHAKNDKKYKNCIRSKISNLKNPKSCHLKHNLFSGTLS 258
Query: 195 PETIVGMTAKEMAGDKM 211
P+ MT EMA D++
Sbjct: 259 PKAFAEMTVMEMASDEL 275
>gi|301628193|ref|XP_002943242.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 2281
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 80 SSNVVRPESVVTEKTNSSDNLSRSM-IRCN--DCFREVVREKVCDALSKVSGEADEEIRD 136
++N +P S + SS + +M IR N ++++ ++V D+ V + +
Sbjct: 676 TANTSQPTSSTPQSAQSSSHPVPNMQIRQNIRRSLKQILWKRVIDSDDLVM------VEN 729
Query: 137 EVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPE 196
EV R+A +E MF + D YK KY+ ++ NLKDPKN V ++
Sbjct: 730 EV-----ARIATNIEREMFNLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLA 784
Query: 197 TIVGMTAKEMAGDKMLS 213
+V + +E+A K+ S
Sbjct: 785 KLVRLKPEELASRKLSS 801
>gi|301628195|ref|XP_002943243.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 2209
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 80 SSNVVRPESVVTEKTNSSDNLSRSM-IRCN--DCFREVVREKVCDALSKVSGEADEEIRD 136
++N +P S + SS + +M IR N ++++ ++V D+ V + +
Sbjct: 604 TANTSQPTSSTPQSAQSSSHPVPNMQIRQNIRRSLKQILWKRVIDSDDLVM------VEN 657
Query: 137 EVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPE 196
EV R+A +E MF + D YK KY+ ++ NLKDPKN V ++
Sbjct: 658 EV-----ARIATNIEREMFNLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLA 712
Query: 197 TIVGMTAKEMAGDKMLS 213
+V + +E+A K+ S
Sbjct: 713 KLVRLKPEELASRKLSS 729
>gi|194742650|ref|XP_001953814.1| GF17954 [Drosophila ananassae]
gi|190626851|gb|EDV42375.1| GF17954 [Drosophila ananassae]
Length = 1976
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 149 ALESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
A+ES M+ + R G YK KY++++ N+KD KN + QV+P+ +V MTA+++A
Sbjct: 1299 AVESEMYHSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTAEQLA 1358
Query: 208 GDKM 211
++
Sbjct: 1359 SQEL 1362
>gi|449266698|gb|EMC77719.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Columba livia]
Length = 360
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 114 VVREKVCDALSK-VSGEA-DEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKA 171
V+R K D L K ++G A D+E D+ + ++ +E +F + + YK ++
Sbjct: 181 VLRCKCTDLLYKALAGSAKDKEETDKW-----LELSKEIEEHIFSLHAKNNKKYKNCIRS 235
Query: 172 VLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ NLK+PK+ R N+ G + P+ MT EMA D++
Sbjct: 236 KISNLKNPKSCHLRHNLFSGTLSPKAFAEMTVMEMASDEL 275
>gi|449482931|ref|XP_004174984.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Taeniopygia
guttata]
Length = 381
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 135 RDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVK 194
+DE + +A +E +F + D YK ++ + NLK+PK+ + N+ G +
Sbjct: 220 KDEEETGKWLELAKEIEEHIFALHAKNDKKYKNCIRSKISNLKNPKSCHLKHNLFSGTLS 279
Query: 195 PETIVGMTAKEMAGDKM 211
P+ MT EMA D++
Sbjct: 280 PKAFAEMTVMEMASDEL 296
>gi|221061105|ref|XP_002262122.1| transcription factor [Plasmodium knowlesi strain H]
gi|193811272|emb|CAQ42000.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 407
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 44/242 (18%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISGVGIVK 68
IQ A DL+ W+N+++++ + ++ K E V++ S C E + +K
Sbjct: 94 IQSIAKDLVDKWKNIAIKE-KHSSSSGSKSAESLKKRKSELVERSDSHTCSEDYELKKIK 152
Query: 69 VQKVDQ----NATSLSSNVVRPES-------VVTEKTNSSDNLS-RSMIRCNDCFRE--- 113
V+ ++ AT SSN E ++ K ++SDN+ + I+ + F E
Sbjct: 153 VKNSNEYKSEQATIQSSNANHNEPNNKTHDILLHTKHDNSDNIQIKESIKNSYQFSELKH 212
Query: 114 --------------------VVREKVCDALSK--VSGEADEEI----RDEVNACDSVRVA 147
V+R+K L K ++G D + R ++N +
Sbjct: 213 MNTDLKALSEWNYNGKFHNDVLRDKAKQFLFKAFITGSDDNLLYLIDRKKLNDI-IYNIE 271
Query: 148 IALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
L EK + Y ++ K++ NL D KNP F ++ + P+ I M ++EMA
Sbjct: 272 NELHKIFIEK-KQSQKEYNMQLKSIKFNLCDKKNPSFNEKIYAEYISPKIIATMNSQEMA 330
Query: 208 GD 209
D
Sbjct: 331 SD 332
>gi|195453902|ref|XP_002073994.1| GK14401 [Drosophila willistoni]
gi|194170079|gb|EDW84980.1| GK14401 [Drosophila willistoni]
Length = 2012
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 105 IRCNDCFREVVREKVCDALSKVSGEADEEIRDE----VNACDSVRVAIALESAMFEKWDR 160
IR N R ++E++ L+++ EA E +D+ + + + + A ++ES M+ + R
Sbjct: 1285 IRVN--VRRTLKEQL---LARIK-EAQEANKDKAIKWLTSLEVEQFAKSVESEMYHSFGR 1338
Query: 161 YDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
G YK KY++++ N+KD KN + QV+P+ +V MT +++A ++
Sbjct: 1339 DAGAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPEQLASQEL 1390
>gi|449015636|dbj|BAM79038.1| similar to transcription elongation factor TFIIS.h [Cyanidioschyzon
merolae strain 10D]
Length = 691
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 146 VAIALESAMFEKWDR--YDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
VA +ESA+FE D +D Y+ + + ++ NL+D +N + R V G + P T+ M +
Sbjct: 232 VAYEIESALFELMDHKVHDD-YRARLRNLVANLRDQRNDELREAVISGSISPSTLCQMNS 290
Query: 204 KEMA 207
+E+A
Sbjct: 291 EELA 294
>gi|259146459|emb|CAY79716.1| Dst1p [Saccharomyces cerevisiae EC1118]
Length = 309
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 32/211 (15%)
Query: 2 KASSRKKIQDFASDLIVSWRNMSLEQMRDERKGSYT---IPGDIEPAKIEKVDKRTSEEC 58
K S+ +I +I SW++ + R + + PG+ E DK T E
Sbjct: 54 KKSTNVEISKLVKKMISSWKDAINKNKRSRQAQQHHQDHAPGNAE-------DKTTVGES 106
Query: 59 QEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREK 118
V V Q A+S S + + + V T+ NS ++ + I + +V++
Sbjct: 107 ----------VNGVQQPASSQSDAMKQDKYVSTKPRNSKNDGVDTAIYHHKLCDQVLKA- 155
Query: 119 VCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWDRYDGPYKIKYKAVLGNL 176
+ D L+K S + I + A A+ES M D + YK +Y+ + N+
Sbjct: 156 LYDVLAKESEHPPQSI---------LHTAKAIESEMNKVNNCDTNEAAYKARYRIIYSNV 206
Query: 177 KDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
NPD + + G + PE + AK++A
Sbjct: 207 ISKNNPDLKHKIANGDITPEFLATCDAKDLA 237
>gi|358390984|gb|EHK40389.1| hypothetical protein TRIATDRAFT_302747 [Trichoderma atroviride IMI
206040]
Length = 305
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D + A+A+E A F YK K +++ NLK+ N D + V G + PE V M
Sbjct: 168 DVIARAVAVEHAAFTTLKGETPEYKKKIRSLFTNLKNKSNRDLGKQVMAGDISPEKFVNM 227
Query: 202 TAKEM 206
T +E+
Sbjct: 228 TDEEL 232
>gi|444517013|gb|ELV11334.1| Death-inducer obliterator 1 [Tupaia chinensis]
Length = 1966
Score = 42.0 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E RVA+ +E MF + D YK
Sbjct: 677 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---RVALHIEKEMFSLFHVTDNRYKS 733
Query: 168 KYKAVLGNLKDPKN 181
KY++++ NLKDPKN
Sbjct: 734 KYRSIMFNLKDPKN 747
>gi|51571541|ref|NP_808520.2| death-inducer obliterator 1 isoform 2 [Mus musculus]
gi|187951163|gb|AAI38714.1| Death inducer-obliterator 1 [Mus musculus]
gi|187952021|gb|AAI38713.1| Death inducer-obliterator 1 [Mus musculus]
Length = 1183
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E ++A+ +E MF + D YK
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 720
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY++++ NLKDPKN V ++ +V M +E+ ++
Sbjct: 721 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 764
>gi|156102921|ref|XP_001617153.1| transcription elongation factor [Plasmodium vivax Sal-1]
gi|148806027|gb|EDL47426.1| transcription elongation factor, putative [Plasmodium vivax]
Length = 435
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 104/241 (43%), Gaps = 44/241 (18%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEISGVGIVK 68
IQ+ A DL+ W+N+++++ + GS + ++ K E V+ + C E + VK
Sbjct: 124 IQNVAKDLVDKWKNIAIKE-KHSSTGSRSAES-LKKRKSELVEGSDNNTCSEDYELKKVK 181
Query: 69 VQKVDQNAT------SLSSNVVRP----ESVVTEKTNSSDNLS-RSMIRCNDCFRE---- 113
V+ V +++ S S N P + ++ K ++SD+L + ++ + F E
Sbjct: 182 VKNVSEHSAKQGTIQSGSPNHGEPNNKADHLLFSKHHNSDHLPIKGSVQNSYHFSELKHV 241
Query: 114 -------------------VVREKVCDALSK--VSGEADEEI----RDEVNACDSVRVAI 148
V+R+K L K ++G D + R ++N +
Sbjct: 242 NTDLKALTEWNYNGKFHNDVLRDKAKQFLFKAFITGSDDNLLYLIDRKKLNDI-IYNIEN 300
Query: 149 ALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAG 208
L EK + Y ++ K++ NL D KNP F ++ + P TI M ++EMA
Sbjct: 301 ELHKFFIEK-KQSQKEYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMAS 359
Query: 209 D 209
D
Sbjct: 360 D 360
>gi|440907449|gb|ELR57597.1| Death-inducer obliterator 1 [Bos grunniens mutus]
Length = 2175
Score = 42.0 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E ++A+ +E MF + D YK
Sbjct: 669 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALLIEKEMFNLFRVTDNRYKS 725
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY++++ NLKDPKN V ++ +V M +E+ ++
Sbjct: 726 KYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 769
>gi|359071808|ref|XP_003586878.1| PREDICTED: death-inducer obliterator 1 [Bos taurus]
Length = 2196
Score = 42.0 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E ++A+ +E MF + D YK
Sbjct: 669 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALLIEKEMFNLFRVTDNRYKS 725
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY++++ NLKDPKN V ++ +V M +E+ ++
Sbjct: 726 KYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 769
>gi|358415060|ref|XP_003582994.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Bos taurus]
Length = 2196
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E ++A+ +E MF + D YK
Sbjct: 669 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALLIEKEMFNLFRVTDNRYKS 725
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY++++ NLKDPKN V ++ +V M +E+ ++
Sbjct: 726 KYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 769
>gi|83766945|dbj|BAE57085.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 761
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 74/136 (54%), Gaps = 19/136 (13%)
Query: 82 NVVRPESVVTEKTNSS-DNLSRSMIRCNDCFREVVRE-KVCDALSKVSGEADEEIRDEVN 139
+V PE V E +N + + + +++R F + V E + + S G++ EE+
Sbjct: 237 DVSTPEPTVEELSNPARKSAASALVRL---FVDQVSEARRRGSFSLSDGKSAEEV----- 288
Query: 140 ACDSVRVAIALESAMFEKWDRYDG----PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKP 195
+ ++A+++E+AM+E + G YK + + +L N+K KNP R + +G + P
Sbjct: 289 ---ARQLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLP 343
Query: 196 ETIVGMTAKEMAGDKM 211
+T+ M++++MA +++
Sbjct: 344 DTLSKMSSQDMASEEL 359
>gi|392572626|gb|EIW65771.1| hypothetical protein TREMEDRAFT_72529 [Tremella mesenterica DSM
1558]
Length = 335
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 130 ADEEIRDE-----VNAC---DSVRVAIALESAMFEKWDRYDG-PYKIKYKAVLGNLKDPK 180
DE +RD+ NA + ++A+E+A+F++ G Y+ K +++ NLKD
Sbjct: 183 GDESVRDKCVEMIYNALAGDSTAERSVAIEAAVFKQQKSQSGNEYRAKMRSLFLNLKDKG 242
Query: 181 NPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NP R + LG + E + ++ ++MA + +
Sbjct: 243 NPGLRNEIVLGYLTAEKLASLSKEDMASESI 273
>gi|409041587|gb|EKM51072.1| hypothetical protein PHACADRAFT_263043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 303
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
D R+ E + DAL+ SG E+I + A A+E+A YK
Sbjct: 141 GDATRDKCLELIYDALAFDSGAPSEQILGK---------AKAIEAAALTDNGGVTAAYKA 191
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
K + + NLKD NP R +V G + MT+ EMA +
Sbjct: 192 KIRTLFVNLKDKNNPGLRESVVAGDLPVTRFCKMTSAEMASE 233
>gi|37359898|dbj|BAC97927.1| mKIAA0333 protein [Mus musculus]
Length = 1201
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E ++A+ +E MF + D YK
Sbjct: 682 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 738
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY++++ NLKDPKN V ++ +V M +E+ ++
Sbjct: 739 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 782
>gi|330921683|ref|XP_003299524.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
gi|311326749|gb|EFQ92363.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
Length = 306
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
VA +E+A + + YK K +++ NLK NP R+ V +G+V + V MT E
Sbjct: 173 VAKQVEAAAYTNAGSVNDAYKAKMRSLFQNLKSKSNPALRKRVLIGEVPAKRFVVMTHDE 232
Query: 206 MAGD 209
M D
Sbjct: 233 MKSD 236
>gi|148698211|gb|EDL30158.1| mCG52124 [Mus musculus]
Length = 216
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 136 DEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKP 195
DEV A +A +E A+F + YK KY+++L NL+DP+N D V V P
Sbjct: 28 DEVEA-----IAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVAHCDVTP 82
Query: 196 ETIVGMTAKEMAGDKM 211
+V M++ ++A ++
Sbjct: 83 NNLVQMSSIQLAPKEL 98
>gi|28204843|gb|AAH44755.1| Dido1 protein [Mus musculus]
Length = 643
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 106 RCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPY 165
+ N R+ +R + + L K ++D+ I E ++A+ +E MF + D Y
Sbjct: 122 QPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRY 178
Query: 166 KIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
K KY++++ NLKDPKN V ++ +V M +E+ ++
Sbjct: 179 KSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 224
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 101 SRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDR 160
S + + N R+ +R + + L K ++D+ + E +VA+ +E MF +
Sbjct: 678 SPAQSQPNSQIRQNIRRSLKEILWKRVNDSDDLVMTESEVG---KVALNIEKEMFNLFQG 734
Query: 161 YDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQ 216
D YK KY++++ NLKDPKN V ++ +V M +E+ K LS ++
Sbjct: 735 TDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLSKLVRMKPEELL-SKELSVWK 789
>gi|398398099|ref|XP_003852507.1| hypothetical protein MYCGRDRAFT_59339, partial [Zymoseptoria
tritici IPO323]
gi|339472388|gb|EGP87483.1| hypothetical protein MYCGRDRAFT_59339 [Zymoseptoria tritici IPO323]
Length = 314
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 144 VRVAIALESAMFEKWDR-YDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
+ VA +E A FE + R + YK K +++ NLK N R+NV ++ PE V MT
Sbjct: 180 LTVARKVEVAAFEHFKRETNAEYKTKMRSLFQNLKMRSNTLLRKNVFSEEIPPEKFVAMT 239
Query: 203 AKEM 206
++E+
Sbjct: 240 SEEL 243
>gi|241948245|ref|XP_002416845.1| DNA strand transfer protein alpha, putative; dna strand transferase
1, putative; pyrimidine pathway regulatory protein 2,
putative; transcription elongation factor SII, putative
[Candida dubliniensis CD36]
gi|223640183|emb|CAX44432.1| DNA strand transfer protein alpha, putative [Candida dubliniensis
CD36]
Length = 303
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 144 VRVAIALESAMFE-KWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
+R+AI +ES +++ ++ + Y+ K ++ NL++ KNP+ R + Q+ P + M+
Sbjct: 167 LRIAIEIESEVYKNEYSKISDSYRNKLRSFTMNLRNKKNPELRERILSKQILPAEFIKMS 226
Query: 203 AKEMAGDKM 211
EMA + +
Sbjct: 227 PNEMAPEAL 235
>gi|68486327|ref|XP_712962.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|68486518|ref|XP_712868.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434285|gb|EAK93699.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434386|gb|EAK93797.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|238879330|gb|EEQ42968.1| hypothetical protein CAWG_01194 [Candida albicans WO-1]
Length = 305
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 144 VRVAIALESAMFE-KWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
+R+AI +E+ +++ ++ + Y+ + ++ NL++ KNP+ R + Q+ P + MT
Sbjct: 169 LRIAIEIEAEVYKSEYSKVSDSYRNRLRSFTMNLRNKKNPELRERILSKQILPAAFIKMT 228
Query: 203 AKEMAGDKM 211
EMA + +
Sbjct: 229 PNEMAPEAL 237
>gi|242096284|ref|XP_002438632.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
gi|241916855|gb|EER89999.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
Length = 732
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A+ +E +F+ YK K +++L NLKD NP R V G++ P+ + MT +E
Sbjct: 338 LALRIEEDLFQLCGGVSKKYKEKGRSLLFNLKDKSNPVLRGQVLSGEITPKCLCSMTTEE 397
Query: 206 MAGDKM 211
+A ++
Sbjct: 398 LASKEL 403
>gi|156040461|ref|XP_001587217.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum
1980]
gi|154696303|gb|EDN96041.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum 1980
UF-70]
Length = 301
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 147 AIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEM 206
A+A+E A F+ + YK K +++ NLK N R+ V G ++P V MT +E+
Sbjct: 169 AMAVEQAAFDHFGGETKDYKEKLRSLFQNLKQVSNTQLRKRVMSGDIEPARFVVMTHEEL 228
Query: 207 AGDKM 211
++M
Sbjct: 229 KSEEM 233
>gi|196008633|ref|XP_002114182.1| predicted protein [Trichoplax adhaerens]
gi|190583201|gb|EDV23272.1| predicted protein [Trichoplax adhaerens]
Length = 996
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VRE + A + + E+I +++ +++ +E +F ++ YK KY+++
Sbjct: 503 VRENIYKAFRDILSKVAEKIAIQMSVVS--KLSKDIEEQLFNLFNDTGSRYKNKYRSLSF 560
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NLKD KN + G + P +V MT++E+A ++
Sbjct: 561 NLKDEKNKALVERILHGDISPSKLVRMTSEELANKEL 597
>gi|409075972|gb|EKM76347.1| hypothetical protein AGABI1DRAFT_45124 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 293
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
YK K +++ NLKD NP FR NV G V E + MT+++MA +
Sbjct: 179 YKQKIRSLFVNLKDKNNPGFRENVISGDVPVEKLAKMTSEDMASE 223
>gi|426192898|gb|EKV42833.1| hypothetical protein AGABI2DRAFT_195610 [Agaricus bisporus var.
bisporus H97]
Length = 293
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 12/160 (7%)
Query: 53 RTSEECQEISGVGIVKVQKVDQNATSLSSNVVRP--ESVVTEKTNS-SDNLSRSMIRCND 109
+++ E ++++ G K Q+ + +SSN+ P ++ + K N S L D
Sbjct: 73 KSAVEKEKLANGGTPKPQQNGKPERKMSSNISTPVTPTMTSGKPNGRSAKLDGVKGGTGD 132
Query: 110 CFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKY 169
R+ E V DAL S E I + A +E + YK K
Sbjct: 133 TTRDKCIELVYDALVNDSSAPVELI---------LSRARGVEKCVHHDNGGTTAAYKQKI 183
Query: 170 KAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+++ NLKD NP FR NV G V E + MT+++MA +
Sbjct: 184 RSLFVNLKDKNNPGFRENVISGDVPVEKLAKMTSEDMASE 223
>gi|255713242|ref|XP_002552903.1| KLTH0D04136p [Lachancea thermotolerans]
gi|238934283|emb|CAR22465.1| KLTH0D04136p [Lachancea thermotolerans CBS 6340]
Length = 293
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWDRYDGPY 165
N R++V DAL+K S + I + AIA+E + + + Y
Sbjct: 129 NHKLRDMVIRAFYDALAKESEHPPQSI---------LTTAIAIEKELNKVNNCELNEKAY 179
Query: 166 KIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
K KY+ V N+ NPD + + G V PE +V KE+A + +
Sbjct: 180 KDKYRVVYANVISKNNPDLKHRITGGDVSPEYLVNCDPKELAPEHL 225
>gi|238501684|ref|XP_002382076.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
gi|220692313|gb|EED48660.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
Length = 924
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 145 RVAIALESAMFEKWDRYDG----PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
++A+++E+AM+E + G YK + + +L N+K KNP R + +G + P+T+
Sbjct: 378 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 435
Query: 201 MTAKEMAGDKM 211
M++++MA +++
Sbjct: 436 MSSQDMASEEL 446
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N+ R+ +R + D L K ++D+ ++ + R+A A+E MF D YK
Sbjct: 635 NNQMRQNIRRSLTDILYKRVSDSDDL---KMTESEVARLAFAIEKEMFNLCLNTDSKYKR 691
Query: 168 KYKAVLGNLKDPK 180
KY++++ NLKDPK
Sbjct: 692 KYRSLMFNLKDPK 704
>gi|58257648|dbj|BAA20791.2| KIAA0333 [Homo sapiens]
Length = 1223
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 693 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 749
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNV--------HLGQVKPETIV 199
D YK KY++++ NLKDPKN V L ++KPE +V
Sbjct: 750 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 797
>gi|391863799|gb|EIT73098.1| putative transcription factor [Aspergillus oryzae 3.042]
Length = 903
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 145 RVAIALESAMFEKWDRYDG----PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
++A+++E+AM+E + G YK + + +L N+K KNP R + +G + P+T+
Sbjct: 357 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 414
Query: 201 MTAKEMAGDKM 211
M++++MA +++
Sbjct: 415 MSSQDMASEEL 425
>gi|70991879|ref|XP_750788.1| PHD finger domain protein [Aspergillus fumigatus Af293]
gi|66848421|gb|EAL88750.1| PHD finger domain protein, putative [Aspergillus fumigatus Af293]
Length = 884
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 145 RVAIALESAMFEKWDRYDG----PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
++ ++E AM++ G PYK++ + +L N+K KNP R + +G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 201 MTAKEMAGDKML 212
M++++MA +++L
Sbjct: 383 MSSQDMASEELL 394
>gi|328351440|emb|CCA37839.1| Transcription elongation factor A protein 2 .l [Komagataella
pastoris CBS 7435]
Length = 329
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
D Y+ K ++++ NLK+ NP RR++ ++ P +V M+A+E+A D +
Sbjct: 212 DDTYRNKLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSL 261
>gi|159124350|gb|EDP49468.1| PHD finger domain protein, putative [Aspergillus fumigatus A1163]
Length = 885
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 145 RVAIALESAMFEKWDRYDG----PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
++ ++E AM++ G PYK++ + +L N+K KNP R + +G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 201 MTAKEMAGDKML 212
M++++MA +++L
Sbjct: 383 MSSQDMASEELL 394
>gi|154320754|ref|XP_001559693.1| transcription elongation factor S-II [Botryotinia fuckeliana
B05.10]
gi|347838992|emb|CCD53564.1| similar to transcription elongation factor s-ii [Botryotinia
fuckeliana]
Length = 301
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 147 AIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEM 206
A+A+E A F+ + YK K +++ NLK N R+ V G + P V MT +E+
Sbjct: 169 AMAVEQAAFDHFGGETKEYKEKLRSLFQNLKQVSNTQLRKRVMSGDIDPARFVVMTHEEL 228
Query: 207 AGDKM 211
++M
Sbjct: 229 KSEEM 233
>gi|119595732|gb|EAW75326.1| death inducer-obliterator 1, isoform CRA_e [Homo sapiens]
Length = 1225
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 695 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 751
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNV--------HLGQVKPETIV 199
D YK KY++++ NLKDPKN V L ++KPE +V
Sbjct: 752 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 799
>gi|71044477|ref|NP_542987.2| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|301129172|ref|NP_001180299.1| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|168278571|dbj|BAG11165.1| death-inducer obliterator 1 [synthetic construct]
gi|223459792|gb|AAI37178.1| Death inducer-obliterator 1 [Homo sapiens]
Length = 1189
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 659 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 715
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNV--------HLGQVKPETIV 199
D YK KY++++ NLKDPKN V L ++KPE +V
Sbjct: 716 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 763
>gi|410227676|gb|JAA11057.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410263506|gb|JAA19719.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410304004|gb|JAA30602.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354255|gb|JAA43731.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 1189
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 659 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 715
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNV--------HLGQVKPETIV 199
D YK KY++++ NLKDPKN V L ++KPE +V
Sbjct: 716 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 763
>gi|383415435|gb|AFH30931.1| death-inducer obliterator 1 isoform b [Macaca mulatta]
Length = 1186
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 656 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 712
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNV--------HLGQVKPETIV 199
D YK KY++++ NLKDPKN V L ++KPE +V
Sbjct: 713 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 760
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYD 162
S + N R+ +R + + L K ++D+ I E ++A+ +E +F + D
Sbjct: 910 SQSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKELFNLFHVTD 966
Query: 163 GPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQ 216
YK KY++++ NLKDPKN V ++ +V M +E+ K LS ++
Sbjct: 967 NRYKSKYRSIMFNLKDPKNQGLFHRVLREEIPLSKLVRMKPEELL-SKELSVWK 1019
>gi|344232834|gb|EGV64707.1| transcription elongation factor [Candida tenuis ATCC 10573]
Length = 286
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 144 VRVAIALESAMF-EKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
+ VA ++E+ +F +++ + Y+ K + + NL++ KNP+ R + GQ+ P V M+
Sbjct: 150 LSVAKSIEAEVFKDEYSKVADGYRNKLRTFVMNLRNKKNPELRDRILSGQITPGKFVKMS 209
Query: 203 AKEMAGDKM 211
EMA + +
Sbjct: 210 PNEMAPETL 218
>gi|254569920|ref|XP_002492070.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
gi|238031867|emb|CAY69790.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
Length = 285
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
D Y+ K ++++ NLK+ NP RR++ ++ P +V M+A+E+A D +
Sbjct: 168 DDTYRNKLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSL 217
>gi|44971658|gb|AAS49898.1| death inducer-obliterator-2 [Homo sapiens]
Length = 1189
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 659 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 715
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNV--------HLGQVKPETIV 199
D YK KY++++ NLKDPKN V L ++KPE +V
Sbjct: 716 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 763
>gi|317142778|ref|XP_001819087.2| PHD finger domain protein [Aspergillus oryzae RIB40]
Length = 896
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 145 RVAIALESAMFEKWDRYDG----PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
++A+++E+AM+E + G YK + + +L N+K KNP R + +G + P+T+
Sbjct: 350 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 407
Query: 201 MTAKEMAGDKM 211
M++++MA +++
Sbjct: 408 MSSQDMASEEL 418
>gi|115468770|ref|NP_001057984.1| Os06g0595900 [Oryza sativa Japonica Group]
gi|113596024|dbj|BAF19898.1| Os06g0595900, partial [Oryza sativa Japonica Group]
Length = 630
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F + YK K +++L NLKD NP R V G + P+ + MT +E
Sbjct: 80 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 139
Query: 206 MAGDKM 211
+A ++
Sbjct: 140 LASKEL 145
>gi|350539011|ref|NP_001232124.1| putative transcription elongation factor A2 [Taeniopygia guttata]
gi|197129380|gb|ACH45878.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 229
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 140 ACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
D +A +E +++ D YK + ++ + NLKD KNP+ ++NV G + P
Sbjct: 161 GADCEHIAAQIEECIYQDVKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPRADC 220
Query: 200 G 200
G
Sbjct: 221 G 221
>gi|189203175|ref|XP_001937923.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985022|gb|EDU50510.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 306
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
VA +E+A + + YK K +++ NLK NP R+ V G+V + V MT E
Sbjct: 173 VAKQVEAAAYTNAGSVNDGYKAKMRSLFQNLKSKSNPALRKRVLTGEVPAKRFVTMTHDE 232
Query: 206 MAGD 209
M D
Sbjct: 233 MKSD 236
>gi|326913628|ref|XP_003203138.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Meleagris gallopavo]
Length = 381
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + D YK ++ + NLK+PK+ + + N+ G + P+ MT EMA D
Sbjct: 235 IEEHVFALHSKNDRKYKNCIRSKISNLKNPKSCNLKHNLFSGTLSPKAFAEMTVMEMASD 294
Query: 210 KM 211
++
Sbjct: 295 EL 296
>gi|190345115|gb|EDK36938.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 146 VAIALESAMF-EKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
VA +E +F +++ + Y+ K + + NL++ KNPD R + GQ+ P + M
Sbjct: 79 VARNIELGVFKQEYSAVNDAYRNKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNPN 138
Query: 205 EMAGDKM 211
EMA + +
Sbjct: 139 EMAPESL 145
>gi|301780734|ref|XP_002925785.1| PREDICTED: death-inducer obliterator 1-like [Ailuropoda
melanoleuca]
Length = 2165
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYD 162
++ + N R+ +R + + L K ++D+ I E + ++A+ +E MF+ + D
Sbjct: 660 ALSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE---SEVGKIALHIEKEMFQLFQVTD 716
Query: 163 GPYKIKYKAVLGNLKDPKN 181
YK KY++++ NLKDPKN
Sbjct: 717 NRYKSKYRSIMFNLKDPKN 735
>gi|281352337|gb|EFB27921.1| hypothetical protein PANDA_015330 [Ailuropoda melanoleuca]
Length = 2163
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYD 162
++ + N R+ +R + + L K ++D+ I E + ++A+ +E MF+ + D
Sbjct: 660 ALSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE---SEVGKIALHIEKEMFQLFQVTD 716
Query: 163 GPYKIKYKAVLGNLKDPKN 181
YK KY++++ NLKDPKN
Sbjct: 717 NRYKSKYRSIMFNLKDPKN 735
>gi|47200172|emb|CAF87330.1| unnamed protein product [Tetraodon nigroviridis]
Length = 255
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 154 MFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
++++ D YK + ++ + NLKDPKNP R+NV G + I M+A+
Sbjct: 111 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAE 161
>gi|146423462|ref|XP_001487659.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 146 VAIALESAMF-EKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
VA +E +F +++ + Y+ K + + NL++ KNPD R + GQ+ P + M
Sbjct: 79 VARNIELGVFKQEYSAVNDAYRNKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNPN 138
Query: 205 EMAGDKM 211
EMA + +
Sbjct: 139 EMAPESL 145
>gi|452001563|gb|EMD94022.1| hypothetical protein COCHEDRAFT_1201848 [Cochliobolus
heterostrophus C5]
Length = 306
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 132 EEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLG 191
E + DE+ + +A +E+A + + YK K +++ NLK+ NP R+ V G
Sbjct: 164 EAMPDEI-----LNIAKHVEAAAYSNAGSVNDAYKGKMRSLFQNLKNKSNPQLRKRVLTG 218
Query: 192 QVKPETIVGMTAKEMAGD 209
++ + V MT EM D
Sbjct: 219 EITAKRFVVMTHDEMKSD 236
>gi|320164226|gb|EFW41125.1| transcription elongation factor A [Capsaspora owczarzaki ATCC
30864]
Length = 433
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 99 NLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDS-VRVAIALESAMFEK 157
N +++ D R+ + + AL D + DE + V +A ++E+++++
Sbjct: 133 NAISTLVHTGDAHRDSCIKALAKAL-------DPTVTDETQISEYFVSLAQSIEASIYKL 185
Query: 158 WDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ P YK ++ + NLK +N DFR+ V G + PE + MT++EMA ++
Sbjct: 186 HNSEVSPKYKTAVRSKMFNLK--QNEDFRKAVLNGSIPPEKVAVMTSEEMATKEL 238
>gi|441637983|ref|XP_004090096.1| PREDICTED: death-inducer obliterator 1 [Nomascus leucogenys]
Length = 1185
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ + E +VA+ +E MF +
Sbjct: 655 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLLMTENEVG---KVALHIEKEMFNLFQ 711
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNV--------HLGQVKPETIV 199
D YK KY++++ NLKDPKN V L ++KPE +V
Sbjct: 712 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 759
>gi|71023611|ref|XP_762035.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
gi|46101600|gb|EAK86833.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
Length = 315
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 146 VAIALESAMFEKWDR--YDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
A+A+E+A+ + Y+ K +++ N+KD NPD R V G + + +V MT
Sbjct: 180 AAVAVEAAILSNQGKGSVTADYRNKVRSLSLNIKDKNNPDLRVRVVEGDIAADKLVTMTN 239
Query: 204 KEMAGDK 210
+E+A DK
Sbjct: 240 EELASDK 246
>gi|443894971|dbj|GAC72317.1| transcription elongation factor TFIIS [Pseudozyma antarctica T-34]
Length = 321
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 113 EVVREKVCDALSKVSGEADEEIRDEVNACDS--VRVAIALESAMFEKWDR--YDGPYKIK 168
E++++KV +A K+ +A E +++ DS A+A+E+A+ + Y+ K
Sbjct: 151 EILQDKVRNACLKLLYQALEIGKEQHGHSDSQVFDAAVAVEAAILANQGKGSVTADYRNK 210
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
+++ N+KD NPD R V + + +V MT +E+A DK
Sbjct: 211 VRSLSLNIKDKNNPDLRVRVVERDIAADKLVTMTNEELASDK 252
>gi|339245691|ref|XP_003374479.1| transcription elongation factor S-II [Trichinella spiralis]
gi|316972266|gb|EFV55949.1| transcription elongation factor S-II [Trichinella spiralis]
Length = 347
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 82 NVVRPESVVTE-----KTNSSDNLSRSMIRC-----NDCFREV---VREKVCDALSKVSG 128
N+ R +SV + ++N SD ++ + IR N F VREK C + S
Sbjct: 139 NLTRNDSVASNMSEGGRSNDSDGVASTPIRPRPFQKNTTFPPQMTDVREK-CRQMLLKSL 197
Query: 129 EADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNV 188
E D E++ R+A +E ++ ++ Y ++ + NL+D KNPD +R+V
Sbjct: 198 EPDLN-SPEISVLTRERLAAEIEQEIYSLFNNTGDRYCACVRSRVFNLRDKKNPDLKRSV 256
Query: 189 HLGQVKPETIVGMTAKEMAGDKM 211
G++ + MT++EMA + +
Sbjct: 257 LSGEITAIRLATMTSEEMASEAL 279
>gi|148234998|ref|NP_001088057.1| death inducer-obliterator 1 [Xenopus laevis]
gi|52354786|gb|AAH82851.1| LOC494751 protein [Xenopus laevis]
Length = 2234
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 94 TNSSDNLSRSMIRCN--DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALE 151
TNSS IR N +E++ ++V D+ V + +EV R+A +E
Sbjct: 623 TNSSQPGPNMQIRQNIRRSLKEILWKRVIDSDDLVM------VENEV-----ARIASNIE 671
Query: 152 SAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
MF + D YK KY+ ++ NLKDPKN V ++ +V + +++A K+
Sbjct: 672 REMFNLYRDTDSRYKSKYRNIMFNLKDPKNQGLYHRVLKEEISLAKLVRLKPEDLASKKL 731
Query: 212 LS 213
S
Sbjct: 732 SS 733
>gi|294656076|ref|XP_458316.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
gi|199430838|emb|CAG86394.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
Length = 290
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 42/211 (19%)
Query: 2 KASSRKKIQDFASDLIVSWRNMSLEQMRDERKGSYTIPGDIEPAKIEKVDKRTSEECQEI 61
+ +S ++ +I +WR + + ++ GS T D +P + K++S E +
Sbjct: 53 RGNSNPEVSSLVKKMIRNWREVVQNEKTKKKTGSATPDKDSKP--VNNNTKQSSTESKFH 110
Query: 62 SGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCD 121
SG + K D T+L N R SV T
Sbjct: 111 SGP---RNPKTDGINTTLYDNTTRNASVSALYT--------------------------- 140
Query: 122 ALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE-KWDRYDGPYKIKYKAVLGNLKDPK 180
AL+ ++ E I + V+ +E+ +F+ ++ + Y+ K + NL++ K
Sbjct: 141 ALAIERNDSGEHI---------LAVSRDIENEVFKAEYSSVNDNYRNKLRTFTMNLRNKK 191
Query: 181 NPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NPD R + ++KP + MT EMA + +
Sbjct: 192 NPDLRDRLLTNKIKPSNFIKMTPNEMAPESL 222
>gi|50556790|ref|XP_505803.1| YALI0F23815p [Yarrowia lipolytica]
gi|74632309|sp|Q6C0K9.1|BYE1_YARLI RecName: Full=Transcription factor BYE1
gi|49651673|emb|CAG78614.1| YALI0F23815p [Yarrowia lipolytica CLIB122]
Length = 822
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 146 VAIALESAMFEKWDRYD----GPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
+A+ +E +++ + + Y+ K++ + NL+D KN R V GQV P+T+V M
Sbjct: 237 LALTIEQELYDAYGTVEPEIGSNYRDKFRTLSFNLRDSKNETLRIRVMTGQVTPQTLVAM 296
Query: 202 TAKEM 206
+++EM
Sbjct: 297 SSEEM 301
>gi|50730263|ref|XP_416834.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Gallus gallus]
Length = 359
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + D YK ++ + NLK+PK+ + + N+ G + P+ MT EMA D
Sbjct: 213 IEEHVFALHCKNDKKYKNCIRSKISNLKNPKSCNLKHNLFSGTLSPKAFAEMTVMEMASD 272
Query: 210 KM 211
++
Sbjct: 273 EL 274
>gi|61679514|pdb|1Y1V|S Chain S, Refined Rna Polymerase Ii-tfiis Complex
gi|61679527|pdb|1Y1Y|S Chain S, Rna Polymerase Ii-Tfiis-DnaRNA COMPLEX
Length = 179
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 111 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWDRYDGPYKIK 168
+ +R++V AL V + E + + A A+ES M D + YK +
Sbjct: 14 YHHKLRDQVLKALYDVLAKESEHPPQSI-----LHTAKAIESEMNKVNNCDTNEAAYKAR 68
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
Y+ + N+ NPD + + G + PE + AK++A
Sbjct: 69 YRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 107
>gi|340517178|gb|EGR47423.1| predicted protein [Trichoderma reesei QM6a]
Length = 309
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 147 AIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
A+A+E+A + ++ YK K +++ NLK+ N D + V G + PE V MT
Sbjct: 177 AVAVENAAYTVFNGEGAEYKKKIRSLFANLKNKSNRDLGKRVMSGDIAPERFVSMT 232
>gi|396472195|ref|XP_003839048.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
gi|312215617|emb|CBX95569.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
Length = 304
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+A + + YK K +++ NLK+ NP R+ V G + + V MT E
Sbjct: 171 IAKQVEAAAYTNAGSINDAYKAKMRSLFQNLKNKTNPQLRKRVFSGDISAKRFVVMTHDE 230
Query: 206 MAGD 209
M D
Sbjct: 231 MKSD 234
>gi|46108040|ref|XP_381078.1| hypothetical protein FG00902.1 [Gibberella zeae PH-1]
Length = 307
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
V AI +E+A F K+ YK K +++ NLK+ N + ++V G++ PE V M+
Sbjct: 172 VNKAITVENAAFVKFKGETADYKKKIRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSD 231
Query: 204 KEMAGD 209
E+ +
Sbjct: 232 DELKSE 237
>gi|408389619|gb|EKJ69057.1| hypothetical protein FPSE_10756 [Fusarium pseudograminearum CS3096]
Length = 308
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
V AI +E+A F K+ YK K +++ NLK+ N + ++V G++ PE V M+
Sbjct: 173 VNKAITVENAAFVKFKGETADYKKKIRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSD 232
Query: 204 KEMAGD 209
E+ +
Sbjct: 233 DELKSE 238
>gi|125597753|gb|EAZ37533.1| hypothetical protein OsJ_21863 [Oryza sativa Japonica Group]
Length = 1136
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F + YK K +++L NLKD NP R V G + P+ + MT +E
Sbjct: 323 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 382
Query: 206 MAGDKM 211
+A ++
Sbjct: 383 LASKEL 388
>gi|325053992|pdb|3PO3|S Chain S, Arrested Rna Polymerase Ii Reactivation Intermediate
Length = 178
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 111 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWDRYDGPYKIK 168
+ +R++V AL V + E + + A A+ES M D + YK +
Sbjct: 13 YHHKLRDQVLKALYDVLAKESEHPPQSI-----LHTAKAIESEMNKVNNCDTNEAAYKAR 67
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
Y+ + N+ NPD + + G + PE + AK++A
Sbjct: 68 YRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 106
>gi|322712025|gb|EFZ03598.1| transcription elongation factor S-II [Metarhizium anisopliae ARSEF
23]
Length = 300
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 142 DSVRVAIALESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
D + A+A+E A+F ++ +G YK K +++ NLK N D + V G + PE
Sbjct: 162 DVIARAVAVEHAVFIEFKEDEGEGYKKKIRSLFANLKTKSNKDLGKRVMSGDISPEKFAK 221
Query: 201 MTAKEM 206
MT +E+
Sbjct: 222 MTDEEL 227
>gi|322694712|gb|EFY86534.1| transcription elongation factor s-ii [Metarhizium acridum CQMa 102]
Length = 303
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 142 DSVRVAIALESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
D + A+A+E A+F ++ +G YK K +++ NLK N D + V G + PE
Sbjct: 162 DVIARAVAVEHAVFVEFKEDEGEGYKKKIRSLFANLKTKSNKDLGKRVMSGDILPEKFAK 221
Query: 201 MTAKEM 206
MT +E+
Sbjct: 222 MTDEEL 227
>gi|76096375|ref|NP_780760.2| death-inducer obliterator 1 isoform 3 [Mus musculus]
gi|152031593|sp|Q8C9B9.4|DIDO1_MOUSE RecName: Full=Death-inducer obliterator 1; Short=DIO-1; AltName:
Full=Death-associated transcription factor 1;
Short=DATF-1
Length = 2256
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 656 VSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 712
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPD-----FRRNVHLGQV---KPETIV 199
D YK KY++++ NLKDPKN R + L ++ KPE +V
Sbjct: 713 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELV 760
>gi|154288118|ref|XP_001544854.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408495|gb|EDN04036.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 378
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 147 AIALESAMFEKWDRYDGP-----YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
AI +ESA + + GP Y+ K +++ NLK+ NPD R V ++ P+ V M
Sbjct: 240 AIQVESAAYNAF----GPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRM 295
Query: 202 TAKEMAGD 209
T E+ D
Sbjct: 296 THDELKSD 303
>gi|392339728|ref|XP_003753889.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
gi|392346978|ref|XP_003749689.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
Length = 2258
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 658 VSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 714
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPD-----FRRNVHLGQV---KPETIV 199
D YK KY++++ NLKDPKN R + L ++ KPE +V
Sbjct: 715 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELV 762
>gi|149034011|gb|EDL88794.1| death associated transcription factor 1 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 2099
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 499 VSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 555
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPD-----FRRNVHLGQV---KPETIV 199
D YK KY++++ NLKDPKN R + L ++ KPE +V
Sbjct: 556 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELV 603
>gi|168050394|ref|XP_001777644.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670987|gb|EDQ57546.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1465
Score = 40.4 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 130 ADEEIRDEVNACDSVR-VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNV 188
A E+++ ++ D R +A +E+ +F+ + Y K +++L NLKD NP+ R V
Sbjct: 343 AVEDVKGGLHFMDQARKLATDIEAELFKLYGS-KKMYNQKARSLLFNLKDKSNPELRARV 401
Query: 189 HLGQVKPETIVGMTAKEMAGDKM 211
G++ PE + M+ +++A ++
Sbjct: 402 FSGEIPPEDLCRMSGEQLASKEL 424
>gi|395526959|ref|XP_003765621.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sarcophilus harrisii]
Length = 352
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
++A +E +F + + YK ++ L NLK+ KN ++N+ G + P+ MT
Sbjct: 201 KLAKEIEGHIFALYSKNLKKYKNCIRSKLSNLKNQKNSHLQQNLFSGALSPKEFAEMTVM 260
Query: 205 EMAGDKM 211
EMA D++
Sbjct: 261 EMANDEL 267
>gi|148675399|gb|EDL07346.1| death inducer-obliterator 1, isoform CRA_a [Mus musculus]
Length = 2056
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 499 VSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 555
Query: 160 RYDGPYKIKYKAVLGNLKDPKN 181
D YK KY++++ NLKDPKN
Sbjct: 556 VTDNRYKSKYRSIMFNLKDPKN 577
>gi|332030327|gb|EGI70070.1| Death-inducer obliterator 1 [Acromyrmex echinatior]
Length = 2282
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 130 ADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVH 189
DEEI D +A +E M++ + YK KY++++ N+KD KN R +
Sbjct: 1288 TDEEIAD---------LAFNIEFEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIA 1338
Query: 190 LGQVKPETIVGMTAKEMAGDKM 211
+ P+ +V ++ EMA ++
Sbjct: 1339 DHSLTPDAVVRLSPDEMASQEL 1360
>gi|393220677|gb|EJD06163.1| transcription elongation factor [Fomitiporia mediterranea MF3/22]
Length = 296
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 144 VRVAIALESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
++ A A+ES + E + G YK K +++ NLKD NP R N+ G+++ M+
Sbjct: 160 LKRATAIESTVLEDHNNDTGKEYKGKIRSLFLNLKDKNNPGLRANIVSGELEVAKFCRMS 219
Query: 203 AKEMAGD 209
++EMA +
Sbjct: 220 SQEMASE 226
>gi|399215957|emb|CCF72645.1| unnamed protein product [Babesia microti strain RI]
Length = 300
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
LE +FE + Y + K++ NL+D N N+H+G++ P+ + M ++MA +
Sbjct: 167 LEQHVFESFHE-KRLYAQQIKSIRFNLQDNNNTQLNYNLHVGEITPQQLATMAPQDMASE 225
Query: 210 KM 211
K+
Sbjct: 226 KL 227
>gi|351714883|gb|EHB17802.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 2261
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 76 ATSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIR 135
ATS + V P + T S+ + S IR N +R + + L K ++D+ I
Sbjct: 648 ATSAPTTV--PATGRLGGTGSAQSQPNSQIRQN------IRRSLKEILWKRVNDSDDLIM 699
Query: 136 DEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKN 181
E ++A+ +E MF + D YK KY++++ NLKDPKN
Sbjct: 700 TENEVG---KIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKN 742
>gi|242795417|ref|XP_002482584.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
gi|218719172|gb|EED18592.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
YK K +++ NLK+ NP R+ V +V PE V MT +E+ D
Sbjct: 183 YKTKIRSLFQNLKNKSNPQLRQRVLSNEVTPEKFVKMTHEELKSD 227
>gi|149638336|ref|XP_001515301.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Ornithorhynchus
anatinus]
Length = 359
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLG 174
VR K A+ + G + D+ ++A +E ++ + + YK ++ +
Sbjct: 181 VRHK---AVGLLHGALTDSSSDQSKVDQGQKLAREIEEHIYALYSKTIKKYKNCIRSKVS 237
Query: 175 NLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
NL++PKN ++N+ G + PE MT +MA D++
Sbjct: 238 NLRNPKNVHLQQNLFSGSLTPEAFAEMTVMDMASDEL 274
>gi|367015614|ref|XP_003682306.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
gi|359749968|emb|CCE93095.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
Length = 295
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDG---P 164
N R++V + DAL+K S + I ++ A A+E M K + DG
Sbjct: 131 NHKLRDMVIRAMYDALAKDSEHPPKSI---------LQTAKAVEEEM-HKLNNCDGSEKA 180
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK KY+ + N+ NPD + + G V P +V KE+A + +
Sbjct: 181 YKDKYRIIYSNIISKNNPDLKHKITSGDVSPFYLVNCDPKELAPEHL 227
>gi|195055893|ref|XP_001994847.1| GH13879 [Drosophila grimshawi]
gi|193892610|gb|EDV91476.1| GH13879 [Drosophila grimshawi]
Length = 2061
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 150 LESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAG 208
+ES M+ + R G YK KY++++ N++D KN + QV+P+ +V MT E+A
Sbjct: 1339 VESEMYHSFGRDVGAKYKSKYRSLIFNIRDRKNKTLFEKICAKQVEPKQLVRMTPSELAS 1398
Query: 209 DKM 211
++
Sbjct: 1399 QEL 1401
>gi|355562965|gb|EHH19527.1| Death-inducer obliterator 1 [Macaca mulatta]
Length = 2238
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 656 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 712
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPD-----FRRNVHLGQ---VKPETIV 199
D YK KY++++ NLKDPKN R + L + +KPE +V
Sbjct: 713 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 760
>gi|109091362|ref|XP_001086709.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Macaca mulatta]
Length = 2238
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 656 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 712
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPD-----FRRNVHLGQ---VKPETIV 199
D YK KY++++ NLKDPKN R + L + +KPE +V
Sbjct: 713 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 760
>gi|134079343|emb|CAK96972.1| unnamed protein product [Aspergillus niger]
Length = 955
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 145 RVAIALESAMFEKWDRYDG----PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
+++++LESAM+E G PY+ + + ++ N+K KNP R + +G + P+ +
Sbjct: 396 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 453
Query: 201 MTAKEMAGDKM 211
M+ ++MA +++
Sbjct: 454 MSTQDMASEEL 464
>gi|354481959|ref|XP_003503168.1| PREDICTED: death-inducer obliterator 1 [Cricetulus griseus]
Length = 2263
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 659 VSSAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 715
Query: 160 RYDGPYKIKYKAVLGNLKDPKN 181
D YK KY++++ NLKDPKN
Sbjct: 716 VTDNRYKSKYRSIMFNLKDPKN 737
>gi|402882034|ref|XP_003904560.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Papio anubis]
gi|402882036|ref|XP_003904561.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Papio anubis]
Length = 2239
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 656 MSAAPSQPNSQIRQNIRRSLKEILWKRVSDSDDLIMTENEVG---KIALHIEKEMFNLFQ 712
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPD-----FRRNVHLGQ---VKPETIV 199
D YK KY++++ NLKDPKN R + L + +KPE +V
Sbjct: 713 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 760
>gi|389586162|dbj|GAB68891.1| transcription elongation factor [Plasmodium cynomolgi strain B]
Length = 405
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
Y ++ K++ NL D KNP F ++ + P TI M ++EMA D
Sbjct: 283 YNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASD 327
>gi|380476055|emb|CCF44922.1| transcription elongation factor S-II [Colletotrichum higginsianum]
Length = 302
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 135 RDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVK 194
R + D + A+A+E A F + Y+ K +++ NLK N NV G++
Sbjct: 158 RSTASVTDVLAKAVAVEHAAFSHYKGVTKEYREKLRSLFSNLKVKSNRQLGVNVMEGKIA 217
Query: 195 PETIVGMTAKEM 206
PE V MT +E+
Sbjct: 218 PERFVVMTHEEL 229
>gi|426392422|ref|XP_004062551.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Gorilla gorilla
gorilla]
gi|426392424|ref|XP_004062552.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 2239
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 658 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 714
Query: 160 RYDGPYKIKYKAVLGNLKDPKN 181
D YK KY++++ NLKDPKN
Sbjct: 715 VTDNRYKSKYRSIMFNLKDPKN 736
>gi|297259403|ref|XP_002798112.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Macaca mulatta]
Length = 2250
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 668 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 724
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPD-----FRRNVHLGQ---VKPETIV 199
D YK KY++++ NLKDPKN R + L + +KPE +V
Sbjct: 725 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 772
>gi|44971714|gb|AAS49899.1| death inducer-obliterator-3 [Homo sapiens]
Length = 2240
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 659 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 715
Query: 160 RYDGPYKIKYKAVLGNLKDPKN 181
D YK KY++++ NLKDPKN
Sbjct: 716 VTDNRYKSKYRSIMFNLKDPKN 737
>gi|410227672|gb|JAA11055.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410227678|gb|JAA11058.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354253|gb|JAA43730.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 2237
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 659 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 715
Query: 160 RYDGPYKIKYKAVLGNLKDPKN 181
D YK KY++++ NLKDPKN
Sbjct: 716 VTDNRYKSKYRSIMFNLKDPKN 737
>gi|317032975|ref|XP_001394653.2| PHD finger domain protein [Aspergillus niger CBS 513.88]
Length = 903
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 145 RVAIALESAMFEKWDRYDG----PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
+++++LESAM+E G PY+ + + ++ N+K KNP R + +G + P+ +
Sbjct: 344 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 401
Query: 201 MTAKEMAGDKM 211
M+ ++MA +++
Sbjct: 402 MSTQDMASEEL 412
>gi|119595730|gb|EAW75324.1| death inducer-obliterator 1, isoform CRA_c [Homo sapiens]
Length = 2276
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 695 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 751
Query: 160 RYDGPYKIKYKAVLGNLKDPKN 181
D YK KY++++ NLKDPKN
Sbjct: 752 VTDNRYKSKYRSIMFNLKDPKN 773
>gi|397479128|ref|XP_003810881.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Pan paniscus]
gi|397479130|ref|XP_003810882.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Pan paniscus]
Length = 2240
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 659 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 715
Query: 160 RYDGPYKIKYKAVLGNLKDPKN 181
D YK KY++++ NLKDPKN
Sbjct: 716 VTDNRYKSKYRSIMFNLKDPKN 737
>gi|355723573|gb|AES07935.1| transcription elongation factor A N-terminal and central domain
containing [Mustela putorius furo]
Length = 146
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F + YKI ++ + NLK+P N ++N+ G P MTA E
Sbjct: 34 LAREIEGHLFTLHSKNLRKYKICVRSKVANLKNPHNSHLQQNLLSGTTSPREFAEMTALE 93
Query: 206 MAGDKM 211
MA +++
Sbjct: 94 MASEEL 99
>gi|452979563|gb|EME79325.1| hypothetical protein MYCFIDRAFT_57652 [Pseudocercospora fijiensis
CIRAD86]
Length = 312
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 146 VAIALESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
VA +E A FE + P YK K +++ NLK N R++V+ ++ P+ V MT+
Sbjct: 178 VARKVEVAAFEHFKHQTSPEYKAKMRSLYQNLKMKGNARLRKDVYSMEIMPKRFVAMTSD 237
Query: 205 EMAGDKM 211
E+ ++M
Sbjct: 238 ELKSEEM 244
>gi|301129165|ref|NP_149072.2| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|301129170|ref|NP_001180298.1| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|116241332|sp|Q9BTC0.5|DIDO1_HUMAN RecName: Full=Death-inducer obliterator 1; Short=DIO-1;
Short=hDido1; AltName: Full=Death-associated
transcription factor 1; Short=DATF-1
Length = 2240
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 659 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 715
Query: 160 RYDGPYKIKYKAVLGNLKDPKN 181
D YK KY++++ NLKDPKN
Sbjct: 716 VTDNRYKSKYRSIMFNLKDPKN 737
>gi|403255274|ref|XP_003920366.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Saimiri boliviensis
boliviensis]
gi|403255276|ref|XP_003920367.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Saimiri boliviensis
boliviensis]
gi|403255278|ref|XP_003920368.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Saimiri boliviensis
boliviensis]
Length = 350
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + + YK ++ + NLK+PKN ++N+ G + P+ MT EMA
Sbjct: 204 IEEHVFALYSKNIKKYKTCIRSKVANLKNPKNSHLKQNLFSGTMSPQEFAEMTVMEMANK 263
Query: 210 KM 211
++
Sbjct: 264 EL 265
>gi|355784325|gb|EHH65176.1| Death-inducer obliterator 1 [Macaca fascicularis]
Length = 2156
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 638 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQ 694
Query: 160 RYDGPYKIKYKAVLGNLKDPKN 181
D YK KY++++ NLKDPKN
Sbjct: 695 VTDNRYKSKYRSIMFNLKDPKN 716
>gi|392340808|ref|XP_003754176.1| PREDICTED: SPOC domain-containing protein 1-like [Rattus
norvegicus]
Length = 663
Score = 40.0 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 115 VREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V A+ +V +E+ + E+ + +A +E+A+F + YK KY+ +L
Sbjct: 56 VRSTVVRAMQEVLWTRTQELPNLELREDEVEGIAEGIEAALFHLTQDTNLRYKSKYRNLL 115
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
NL+DP+N F + H V P+ +V M++ ++A
Sbjct: 116 FNLRDPRNDLFLKVAHC-DVTPKDLVQMSSIQLA 148
>gi|213406231|ref|XP_002173887.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
gi|212001934|gb|EEB07594.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
Length = 296
Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+ D Y+ K +++ NLKD +NP R+ V G + P+ + M++ E+A +
Sbjct: 177 KTDSAYRNKMRSLYMNLKDKQNPQLRKRVISGAISPKRLSEMSSAELASE 226
>gi|150864771|ref|XP_001383742.2| hypothetical protein PICST_57286 [Scheffersomyces stipitis CBS
6054]
gi|149386027|gb|ABN65713.2| transcription elongation factor S-IIMeiotic DNA recombination
factor (STP-alpha) [Scheffersomyces stipitis CBS 6054]
Length = 294
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 144 VRVAIALESAMFE-KWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
+ VA +ES +F+ ++ + Y+ K + NL++ KNP+ R + G +KP + M+
Sbjct: 158 LSVAREIESEVFKSEYSNVNDNYRNKLRTFTMNLRNKKNPELRERLLSGGIKPAEFIKMS 217
Query: 203 AKEMAGDKM 211
EMA + +
Sbjct: 218 PNEMAPEAL 226
>gi|392348387|ref|XP_003750093.1| PREDICTED: SPOC domain-containing protein 1-like [Rattus
norvegicus]
Length = 768
Score = 39.7 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 115 VREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVL 173
VR V A+ +V +E+ + E+ + +A +E+A+F + YK KY+ +L
Sbjct: 161 VRSTVVRAMQEVLWTRTQELPNLELREDEVEGIAEGIEAALFHLTQDTNLRYKSKYRNLL 220
Query: 174 GNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
NL+DP+N F + H V P+ +V M++ ++A
Sbjct: 221 FNLRDPRNDLFLKVAHC-DVTPKDLVQMSSIQLA 253
>gi|302842544|ref|XP_002952815.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
gi|300261855|gb|EFJ46065.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
Length = 233
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 162 DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
D YK + ++ +LK +N D RR V GQV+P+ +VGM +++A + Y R
Sbjct: 103 DQEYKAAARTLVASLK--RNADLRRRVLSGQVRPDELVGMGVRQLATPQQQEEYAR 156
>gi|259482276|tpe|CBF76603.1| TPA: transcription elongation factor S-II (AFU_orthologue;
AFUA_3G07670) [Aspergillus nidulans FGSC A4]
Length = 304
Score = 39.7 bits (91), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 164 PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
PY+ K +++ NLK+ NP R V +V PE V MT +E+ D
Sbjct: 190 PYRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELRSD 235
>gi|67537382|ref|XP_662465.1| hypothetical protein AN4861.2 [Aspergillus nidulans FGSC A4]
gi|40741749|gb|EAA60939.1| hypothetical protein AN4861.2 [Aspergillus nidulans FGSC A4]
Length = 386
Score = 39.7 bits (91), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 164 PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
PY+ K +++ NLK+ NP R V +V PE V MT +E+ D
Sbjct: 190 PYRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELRSD 235
>gi|395840531|ref|XP_003793109.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Otolemur garnettii]
Length = 352
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F ++ + YK ++ + NLK+P+N ++N+ G + P MT EMA +
Sbjct: 206 IEEHIFTRYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGALSPREFAEMTVMEMANE 265
Query: 210 KM 211
++
Sbjct: 266 EL 267
>gi|332262279|ref|XP_003280189.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Nomascus
leucogenys]
gi|332262281|ref|XP_003280190.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Nomascus
leucogenys]
Length = 2236
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D+ + E +VA+ +E MF +
Sbjct: 655 MSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLLMTENEVG---KVALHIEKEMFNLFQ 711
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPD-----FRRNVHLGQ---VKPETIV 199
D YK KY++++ NLKDPKN R + L + +KPE +V
Sbjct: 712 VTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 759
>gi|307203942|gb|EFN82849.1| Death-inducer obliterator 1 [Harpegnathos saltator]
Length = 2352
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 130 ADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVH 189
DEEI D +A +E M++ + YK KY++++ N+KD KN R +
Sbjct: 1340 TDEEIAD---------LAFNIELEMYKYFKDTGAKYKAKYRSLVFNIKDTKNLTLFRKIA 1390
Query: 190 LGQVKPETIVGMTAKEMAGDKM 211
+ P+ +V ++ EMA ++
Sbjct: 1391 DRSLTPDAVVRLSPDEMASQEL 1412
>gi|159162262|pdb|1ENW|A Chain A, Elongation Factor Tfiis Domain Ii
Length = 114
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 111 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWDRYDGPYKIK 168
+ +R++V AL V + E + + A A+ES M D + YK +
Sbjct: 18 YHHKLRDQVLKALYDVLAKESEHPPQSI-----LHTAKAIESEMNKVNNCDTNEAAYKAR 72
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
Y+ + N+ NPD + + G + PE + AK++A
Sbjct: 73 YRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 111
>gi|395829525|ref|XP_003787906.1| PREDICTED: death-inducer obliterator 1 [Otolemur garnettii]
Length = 2230
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E ++A+ +E MF + D YK
Sbjct: 670 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 726
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQR 217
KY++++ NLKDPKN V ++ +V M +E+ ++ + +R
Sbjct: 727 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTWKER 776
>gi|353234293|emb|CCA66319.1| related to transcription elongation factor TFIIS [Piriformospora
indica DSM 11827]
Length = 280
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDR--YDGPY 165
D R+ R + +AL SG E I ++ AIA+E A F + + Y
Sbjct: 116 GDKTRDSTRPLIYNALCIDSGAPSELI---------LKRAIAVEEAAFTICGKGESNSDY 166
Query: 166 KIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+ K +++ NLK +NP R+ V G + E +V M++ +MA +
Sbjct: 167 RNKMRSLFLNLKGKENPSLRQGVVSGDISAEKLVTMSSSDMASE 210
>gi|418489153|ref|YP_007003009.1| putative DNA primase [Lactobacillus phage JCL1032]
gi|175940328|gb|ACB72586.1| putative DNA primase [Lactobacillus phage JCL1032]
Length = 784
Score = 39.3 bits (90), Expect = 0.99, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 115 VREKVCDALSKVSGEADEE---IRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKA 171
V E + A+ G+ DE + DE C+ +V+ + + F+ W R +G Y +KA
Sbjct: 687 VPESIKSAVEDYRGQMDEVQAFLEDETAPCEGAQVSSKVLYSKFQDWARRNGEYVFSHKA 746
Query: 172 VLGNLKDPKNPDFRR--NVHLGQVKPETIVGMTAKEM 206
+KD R V+LG ET++G TAKE+
Sbjct: 747 FSQKMKDKCKKKHTRVGTVYLGIRTTETVIGDTAKEV 783
>gi|322795023|gb|EFZ17875.1| hypothetical protein SINV_15581 [Solenopsis invicta]
Length = 695
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 130 ADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVH 189
DEEI D +A +E M++ + YK KY++++ N+KD KN R +
Sbjct: 162 TDEEIAD---------LAFNIELEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIA 212
Query: 190 LGQVKPETIVGMTAKEMAGDKM 211
+ P+ +V ++ EMA ++
Sbjct: 213 DRSLTPDAVVRLSPDEMASQEL 234
>gi|449299188|gb|EMC95202.1| hypothetical protein BAUCODRAFT_530419 [Baudoinia compniacensis
UAMH 10762]
Length = 311
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 78 SLSSNVVRPESVVTEK-TNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRD 136
S +SN R V EK T ++D ++ + D R + + L+ +S E+ +E+
Sbjct: 119 SATSNPARKSKVPPEKRTFTADEVNTDLT--GDTTRNGCIGLIYNGLAYMSEESPDEV-- 174
Query: 137 EVNACDSVRVAIALESAMFE-KWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKP 195
+ A ++E+A F + YK+K +++ NLK N RR+V G+++P
Sbjct: 175 -------LVAARSVEAAAFSVHNNETSSAYKMKMRSLFQNLKMKGNATLRRDVFNGKIEP 227
Query: 196 ETIVGMTAKEM 206
+ V MT+ E+
Sbjct: 228 KRFVTMTSDEL 238
>gi|239781978|pdb|3GTM|S Chain S, Co-Complex Of Backtracked Rna Polymerase Ii With Tfiis
Length = 173
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 111 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWDRYDGPYKIK 168
R+ V + + D L+K S + I + A A+ES M D + YK +
Sbjct: 12 LRDQVLKALYDVLAKESEHPPQSI---------LHTAKAIESEMNKVNNCDTNEAAYKAR 62
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
Y+ + N+ NPD + + G + PE + AK++A
Sbjct: 63 YRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 101
>gi|302507047|ref|XP_003015480.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
gi|291179052|gb|EFE34840.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
Length = 297
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 144 VRVAIALESAMFEKWDRYDGP-----YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETI 198
+R A +E+A F+ + GP Y+ K +++ NLK+ N R V +V PE
Sbjct: 162 LRKATEVEAAAFKAF----GPENKEVYRTKMRSLFQNLKNKSNLSLRTRVLTNEVTPERF 217
Query: 199 VGMTAKEMAGD 209
V MT +E+ D
Sbjct: 218 VNMTHEELKSD 228
>gi|40287878|gb|AAR84049.1| death inducer-obliterator-2 [Mus musculus]
Length = 1183
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D I E ++A+ +E MF + D +K
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDYLIMTENEVG---KIALHIEKEMFNLFQVTDNRFKS 720
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY++++ NLKDPKN V ++ +V M +E+ ++
Sbjct: 721 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 764
>gi|119470088|ref|XP_001258016.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
gi|119406168|gb|EAW16119.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
Length = 884
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 145 RVAIALESAMFEKWDRYDG----PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
++ ++E AM++ G PYK++ + +L N+K KNP R + +G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 201 MTAKEMAGDKM 211
M++++MA +++
Sbjct: 383 MSSQDMASEEL 393
>gi|384495291|gb|EIE85782.1| hypothetical protein RO3G_10492 [Rhizopus delemar RA 99-880]
Length = 511
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 146 VAIALESAMFEKWD---RYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
+A ++ES MF + R G YK K++++L NLKD N F+ + G + P ++ M
Sbjct: 126 LAKSIESTMFSQLGDRGRTCGEVYKNKFRSLLHNLKDKANQTFQLRIVTGDLSPLELIKM 185
Query: 202 TAKEMAGDKMLS 213
++++MA ++ S
Sbjct: 186 SSEDMANPELKS 197
>gi|448079285|ref|XP_004194362.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359375784|emb|CCE86366.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
Y+ K + NL++ KNPD R + G++ PE + M+ +MA + +
Sbjct: 182 YRTKLRTFTMNLRNKKNPDLRDRLLSGKISPEAFIKMSPNDMAPEAL 228
>gi|302658771|ref|XP_003021085.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
gi|291184964|gb|EFE40467.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
Length = 297
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 144 VRVAIALESAMFEKWDRYDGP-----YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETI 198
+R A +E+A F+ + GP Y+ K +++ NLK+ N R V +V PE
Sbjct: 162 LRKAAEVEAAAFKAF----GPESKEVYRTKMRSLFQNLKNTSNLSLRTRVLTNEVTPERF 217
Query: 199 VGMTAKEMAGD 209
V MT +E+ D
Sbjct: 218 VNMTHEELKSD 228
>gi|358387656|gb|EHK25250.1| hypothetical protein TRIVIDRAFT_81951 [Trichoderma virens Gv29-8]
Length = 304
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D + A+A+E+A F ++ YK K +++ NLK N D + V G + P V M
Sbjct: 167 DVIAKAVAVENAAFTLFNGEGAEYKKKIRSLFSNLKSKTNRDLGKRVMSGDITPSRFVTM 226
Query: 202 TAKEM 206
T +++
Sbjct: 227 TDEDL 231
>gi|348554091|ref|XP_003462859.1| PREDICTED: death-inducer obliterator 1 [Cavia porcellus]
Length = 2259
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E ++A+ +E MF + D YK
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 720
Query: 168 KYKAVLGNLKDPKN 181
KY++++ NLKDPKN
Sbjct: 721 KYRSIMFNLKDPKN 734
>gi|58268784|ref|XP_571548.1| positive transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113304|ref|XP_774677.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257321|gb|EAL20030.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227783|gb|AAW44241.1| positive transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 349
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 21/221 (9%)
Query: 9 IQDFASDLIVSWRNMSLEQMRDERKGSYTIPG-DIEPAKIEKVDKRTSEE--CQEISGVG 65
+ A +++ WR+ ++E+ + +RK + G D++ K E KR E C
Sbjct: 63 VSSLAKEIVKKWRD-AVEETKKKRKRAEGDEGKDVKKEKEEGNGKRVKAESMCALSPAAE 121
Query: 66 IVKVQKVDQNATSLSS--NVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVR----EKV 119
+ A SL++ + P S T ++ R + D R R + V
Sbjct: 122 SGSDTHIHFAAGSLAATPSASTPASASTPDVKATSPPVRQPLSTIDSSRTTPRTAKSDGV 181
Query: 120 CDALSKVSGEAD--EEIRD-------EVNACDSV-RVAIALESAMFEKWDRYDG-PYKIK 168
D+L S E + +RD + A DS AI +E A + + G Y+ K
Sbjct: 182 ADSLRADSSEGGSVDSVRDKCVIMIYDALALDSTAERAIGIERAANKAMNFSTGNDYRAK 241
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+++ NLKD NP R + LG V E + M+ EMA +
Sbjct: 242 MRSLFLNLKDKGNPALRNEIVLGYVSTEKVASMSKDEMASE 282
>gi|400603045|gb|EJP70643.1| transcription elongation factor S-II [Beauveria bassiana ARSEF
2860]
Length = 309
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 135 RDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVK 194
R + D + ++A+E+A F + YK K +++ NLK+ N ++V ++
Sbjct: 165 RSTASESDVLAKSVAVEAAAFAHFKGQGADYKKKIRSLFTNLKNKSNRALGQSVMASEIP 224
Query: 195 PETIVGMTAKEMAGD 209
PE V MT ++ D
Sbjct: 225 PERFVAMTDDDLKSD 239
>gi|344254957|gb|EGW11061.1| Death-inducer obliterator 1 [Cricetulus griseus]
Length = 803
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKN 181
++A+ +E MF + D YK KY++++ NLKDPKN
Sbjct: 740 KIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKN 776
>gi|448083875|ref|XP_004195463.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359376885|emb|CCE85268.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
Y+ K + NL++ KNPD R + G++ PE + M+ +MA + +
Sbjct: 182 YRTKLRTFTMNLRNKKNPDLRDRLLSGKISPEAFIKMSPNDMAPEAL 228
>gi|149244436|ref|XP_001526761.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449155|gb|EDK43411.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 322
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 144 VRVAIALESAMFE-KWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
V VA +ESA+F+ ++ + + Y+ K + + L++ KNP+ R + Q+ E + M+
Sbjct: 186 VAVAAEIESAVFKNEYLKVNEAYRNKLRTFVMQLRNKKNPELRERLLTRQITAERFIKMS 245
Query: 203 AKEMAGDKM 211
EMA +++
Sbjct: 246 PNEMAPEEL 254
>gi|334346763|ref|XP_003341849.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Monodelphis domestica]
Length = 366
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 145 RVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAK 204
++A +E +F + + YK ++ + NLK+ KNP ++N+ G + P+ MT
Sbjct: 215 KLAREIEEYIFVLYSKNLKKYKNCIRSKVSNLKNQKNPHLQQNLFSGTLSPKEFAEMTVM 274
Query: 205 EMAGDKM 211
EMA +++
Sbjct: 275 EMANEEL 281
>gi|431909796|gb|ELK12942.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Pteropus alecto]
Length = 352
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E +F + + YK ++ + NLK+PKN ++N+ G + P MT E
Sbjct: 202 LAREIEGHIFTLYSKNLKKYKACIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVME 261
Query: 206 MAGDKM 211
MA +++
Sbjct: 262 MASNEL 267
>gi|302309342|ref|NP_986676.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|299788313|gb|AAS54500.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|374109927|gb|AEY98832.1| FAGR011Wp [Ashbya gossypii FDAG1]
Length = 304
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 109 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD--RYDGPYK 166
D R++V DAL+K S + I + +AI +E M++ D + YK
Sbjct: 141 DKLRDMVIRAFYDALAKESEHPPQSI---------LAIAIDIEKHMWQLNDPGENEKAYK 191
Query: 167 IKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY+ + N+ N D + + G + PE +V KE+A + +
Sbjct: 192 DKYRVIYSNVISKNNRDLKHKITNGDITPEYLVNCDPKELAPEHL 236
>gi|403282553|ref|XP_003932709.1| PREDICTED: death-inducer obliterator 1 [Saimiri boliviensis
boliviensis]
Length = 2234
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E ++A+ +E MF + D YK
Sbjct: 666 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFHVTDNRYKS 722
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKMLSCYQ 216
KY++++ NLKDPKN V ++ +V M +E+ K LS ++
Sbjct: 723 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELV-SKELSTWK 770
>gi|307187162|gb|EFN72405.1| Death-inducer obliterator 1 [Camponotus floridanus]
Length = 2322
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 130 ADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVH 189
DEEI D +A +E M++ + YK KY++++ N+KD KN R +
Sbjct: 1330 TDEEIAD---------LAFNIELEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIA 1380
Query: 190 LGQVKPETIVGMTAKEMAGDKM 211
+ P+ +V ++ EMA ++
Sbjct: 1381 DRSLTPDAVVRLSPDEMASQEL 1402
>gi|149734279|ref|XP_001491643.1| PREDICTED: death-inducer obliterator 1 [Equus caballus]
Length = 2272
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R+ +R + + L K ++D+ I E ++A+ +E MF + D YK
Sbjct: 670 NSQIRQNIRRSLKEILWKRVSDSDDLIMTENEVG---KIALHIEKEMFNLFRVTDNRYKS 726
Query: 168 KYKAVLGNLKDPKN 181
KY++++ NLKDPKN
Sbjct: 727 KYRSIMFNLKDPKN 740
>gi|302683244|ref|XP_003031303.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
gi|300104995|gb|EFI96400.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
Length = 286
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 141 CDSVRVAIA---LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPET 197
CDS +A +E+A++ + + YK K + + NLK NP R V G+++P
Sbjct: 145 CDSNTIAEKARDVEAAVYNQNGCTNEAYKTKLRTLTANLKAKSNPGLRARVLKGELEPAR 204
Query: 198 IVGMTAKEMAGD 209
+ M+ +MA +
Sbjct: 205 LATMSVADMASE 216
>gi|164661661|ref|XP_001731953.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
gi|159105854|gb|EDP44739.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
Length = 304
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 133 EIRDEVNACDSVRVAIALESAMFEK--WDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHL 190
E++D A+ +E A + K + Y+ K +++ NLKD NP+ R+ V
Sbjct: 156 EVQDHAEPQTVFASAMKIEEAAYTKIGASTTNNDYRGKVRSLSLNLKDKNNPELRQKVLE 215
Query: 191 GQVKPETIVGMTAKEMAGDKM 211
G + P +V M ++E+A +
Sbjct: 216 GHIDPGMLVVMRSEELASKSL 236
>gi|448518329|ref|XP_003867941.1| Dst1 protein [Candida orthopsilosis Co 90-125]
gi|380352280|emb|CCG22505.1| Dst1 protein [Candida orthopsilosis]
Length = 300
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 144 VRVAIALESAMFE-KWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
+ +A +ES +F+ ++ + + Y+ K ++ NL++ KNP+ R V Q+ + MT
Sbjct: 164 ITIASEIESEVFKSEYSKVNDAYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMT 223
Query: 203 AKEMAGDKM 211
EMA + +
Sbjct: 224 PNEMAPEAL 232
>gi|354543920|emb|CCE40642.1| hypothetical protein CPAR2_106770 [Candida parapsilosis]
Length = 300
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 144 VRVAIALESAMFE-KWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
+ +A +ES +F+ ++ + + Y+ K ++ NL++ KNP+ R V Q+ + MT
Sbjct: 164 ITIASEIESEVFKSEYSKVNDSYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMT 223
Query: 203 AKEMAGDKM 211
EMA + +
Sbjct: 224 PNEMAPEAL 232
>gi|225560163|gb|EEH08445.1| transcription elongation factor S-II [Ajellomyces capsulatus
G186AR]
Length = 306
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 147 AIALESAMFEKWDRYDGP-----YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
AI +E A + + GP Y+ K +++ NLK+ NPD R V ++ P+ V M
Sbjct: 174 AIQVELAAYNAF----GPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRM 229
Query: 202 TAKEMAGD 209
T E+ D
Sbjct: 230 THDELKSD 237
>gi|240278909|gb|EER42415.1| transcription elongation factor S-II [Ajellomyces capsulatus H143]
gi|325090170|gb|EGC43480.1| transcription elongation factor S-II [Ajellomyces capsulatus H88]
Length = 306
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 147 AIALESAMFEKWDRYDGP-----YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
AI +E A + + GP Y+ K +++ NLK+ NPD R V ++ P+ V M
Sbjct: 174 AIQVELAAYNAF----GPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRM 229
Query: 202 TAKEMAGD 209
T E+ D
Sbjct: 230 THDELKSD 237
>gi|195500468|ref|XP_002097386.1| GE26190 [Drosophila yakuba]
gi|194183487|gb|EDW97098.1| GE26190 [Drosophila yakuba]
Length = 2001
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 149 ALESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
++E MF + R G YK KY++++ N+KD KN + QV+P+ +V MT +++A
Sbjct: 1311 SVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTPEQLA 1370
Query: 208 GDKM 211
++
Sbjct: 1371 SQEL 1374
>gi|50286491|ref|XP_445674.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524979|emb|CAG58585.1| unnamed protein product [Candida glabrata]
Length = 306
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRY--DGPY 165
N+ R+ V + DAL+K S + I ++ +IA+E M + D + Y
Sbjct: 142 NNKLRDQVIRALYDALAKDSEHPPKSI---------LQTSIAIEEEMHKLNDSSIKEKEY 192
Query: 166 KIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
K KY+ + N+ NPD + + G + PE +V K++A + +
Sbjct: 193 KDKYRVIYSNIISRNNPDLKVKIANGDLSPEQLVNSDPKDLAPEHL 238
>gi|343427400|emb|CBQ70927.1| related to transcription elongation factor TFIIS [Sporisorium
reilianum SRZ2]
Length = 319
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 113 EVVREKVCDALSKVSGEADEEIRDEVNACDS--VRVAIALESAMFEKWDR--YDGPYKIK 168
E++ +KV +A K+ + E +D DS A+A+E+A+ + Y+ K
Sbjct: 149 EILNDKVRNACLKLLYNSLEIGKDAHGWSDSQIFDAAVAVEAAILANQGKGAVTTEYRNK 208
Query: 169 YKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
+++ N+KD NPD R V + +T+V M+ +E+A DK
Sbjct: 209 VRSLSLNIKDKNNPDLRARVVERDIPADTLVTMSNEELASDK 250
>gi|342878267|gb|EGU79622.1| hypothetical protein FOXB_09905 [Fusarium oxysporum Fo5176]
Length = 315
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D + A+A+E A + K+ YK K +++ NLK+ N + R+V G++ E V M
Sbjct: 170 DVITRAVAVEHAAYTKFKGETPDYKKKIRSLFTNLKNKSNRELGRSVLSGEITAEKFVIM 229
Query: 202 TAKEMAGD 209
T E+ +
Sbjct: 230 TDDELKSE 237
>gi|194901746|ref|XP_001980412.1| GG18883 [Drosophila erecta]
gi|190652115|gb|EDV49370.1| GG18883 [Drosophila erecta]
Length = 2004
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 149 ALESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMA 207
++E MF + R G YK KY++++ N+KD KN + QV+P+ +V MT +++A
Sbjct: 1316 SVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTPEQLA 1375
Query: 208 GDKM 211
++
Sbjct: 1376 SQEL 1379
>gi|444318181|ref|XP_004179748.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
gi|387512789|emb|CCH60229.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
Length = 308
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R++V + + DAL K S E+ I + + LE F D + Y+
Sbjct: 144 NHKLRDMVVKALYDALVKDSTESSSLIL-------KLATEVELEMKKFSDPDVNEKQYRD 196
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY+ V NL NP+ + + G V P +V KE+A + +
Sbjct: 197 KYRVVYSNLISKNNPELKFRIVGGDVSPARLVTCDPKELAPESL 240
>gi|345487114|ref|XP_003425625.1| PREDICTED: hypothetical protein LOC100679883 isoform 2 [Nasonia
vitripennis]
Length = 2039
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 109 DCFREVVREKVCDAL-SKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
+ R VR+ + + L S+V D I +E + +A+ +E MF+ + YK
Sbjct: 1303 EPIRLTVRKTLAELLTSRVKEANDLAITEE----EISELALQIELEMFKFFKDTGQKYKS 1358
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY++++ N+KD KN R + + P +V ++ EMA ++
Sbjct: 1359 KYRSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQEL 1402
>gi|345487112|ref|XP_003425624.1| PREDICTED: hypothetical protein LOC100679883 isoform 1 [Nasonia
vitripennis]
Length = 2181
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 109 DCFREVVREKVCDAL-SKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
+ R VR+ + + L S+V D I +E + +A+ +E MF+ + YK
Sbjct: 1296 EPIRLTVRKTLAELLTSRVKEANDLAITEE----EISELALQIELEMFKFFKDTGQKYKS 1351
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY++++ N+KD KN R + + P +V ++ EMA ++
Sbjct: 1352 KYRSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQEL 1395
>gi|195166102|ref|XP_002023874.1| GL27309 [Drosophila persimilis]
gi|194106034|gb|EDW28077.1| GL27309 [Drosophila persimilis]
Length = 2185
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK KY++++ N+KD KN + QV+P+ +V MT +E+A ++
Sbjct: 1503 YKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELASQEL 1549
>gi|426241849|ref|XP_004023383.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Ovis aries]
Length = 1927
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 31/151 (20%)
Query: 62 SGVGIVKVQKVDQNATSLSSNV---VRPESVVTEKTNSS--DNLSRSMIRCNDCFREVVR 116
S + V+K + SL+S + P S + + NS N+ RS+ +E++
Sbjct: 581 SAASVGAVRKPGSTSVSLASPAPGRLGPVSPASSQPNSQIRQNIRRSL-------KEILW 633
Query: 117 EKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNL 176
++V D+ + E +EV ++A+ +E MF + D YK KY++++ NL
Sbjct: 634 KRVNDSDDLIMTE------NEVG-----KIALLIEKEMFNLFRVTDNRYKSKYRSLMFNL 682
Query: 177 KDPKNPD-----FRRNVHLGQV---KPETIV 199
KDPKN R + L ++ KPE +V
Sbjct: 683 KDPKNQGLFHRVLREEISLAKLVRMKPEELV 713
>gi|401625778|gb|EJS43771.1| dst1p [Saccharomyces arboricola H-6]
Length = 309
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 77 TSLSSNVVRPESVVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRD 136
+S S+ + + V+ K +S N + R+ V + + D L+K S + I
Sbjct: 114 SSPQSDATKQDKYVSTKPRNSKNDGVDTAIYHHKLRDQVLKALYDVLAKDSEHPPQSI-- 171
Query: 137 EVNACDSVRVAIALESAM--FEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVK 194
+ A A+E M D + YK +Y+ + N+ NPD + + G +
Sbjct: 172 -------LHTAKAIEDEMNKINNCDSSEALYKARYRIIYSNIISKNNPDLKHKIANGDIT 224
Query: 195 PETIVGMTAKEMA 207
PE + AK++A
Sbjct: 225 PEFLATCDAKDLA 237
>gi|198450551|ref|XP_001358032.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
gi|198131086|gb|EAL27169.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
Length = 2182
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK KY++++ N+KD KN + QV+P+ +V MT +E+A ++
Sbjct: 1501 YKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELASQEL 1547
>gi|261338797|gb|ACX70080.1| UT01587p [Drosophila melanogaster]
Length = 1144
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 150 LESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAG 208
+E MF + R G YK KY++++ N+KD KN + QV+P +V MT +++A
Sbjct: 448 VELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 507
Query: 209 DKM 211
++
Sbjct: 508 QEL 510
>gi|355559483|gb|EHH16211.1| TFIIS central domain-containing protein 1 [Macaca mulatta]
gi|355757190|gb|EHH60715.1| TFIIS central domain-containing protein 1 [Macaca fascicularis]
Length = 380
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + + YK ++ + NLK+PKN ++N+ G + P MT EMA
Sbjct: 234 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 293
Query: 210 KM 211
++
Sbjct: 294 EL 295
>gi|402909518|ref|XP_003917464.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Papio anubis]
Length = 350
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
A +E +F + + YK ++ + NLK+PKN ++N+ G + P MT E
Sbjct: 200 FAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVME 259
Query: 206 MAGDKM 211
MA ++
Sbjct: 260 MANKEL 265
>gi|195110799|ref|XP_001999967.1| GI24826 [Drosophila mojavensis]
gi|193916561|gb|EDW15428.1| GI24826 [Drosophila mojavensis]
Length = 2080
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 150 LESAMFEKWDR-YDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAG 208
+ES M+ + + YK KY++++ N+KD KN + QV+P+ +V MT E+A
Sbjct: 1366 VESEMYNSFGQDVSAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELAS 1425
Query: 209 DKM 211
++
Sbjct: 1426 QEL 1428
>gi|348554565|ref|XP_003463096.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Cavia porcellus]
Length = 352
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 136 DEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKP 195
D+ NA A +E +F + + YK ++ + NLK+P+N ++N+ G + P
Sbjct: 192 DQANADLWQNFAREIEECIFALYSKNIKKYKTCIRSKVANLKNPRNCHLQQNLLSGTISP 251
Query: 196 ETIVGMTAKEMAGDKM 211
+ MT +MA ++
Sbjct: 252 KEFAEMTTMDMANKEL 267
>gi|75057265|sp|Q9GMV6.1|TEANC_MACFA RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
gi|9929973|dbj|BAB12143.1| hypothetical protein [Macaca fascicularis]
Length = 350
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + + YK ++ + NLK+PKN ++N+ G + P MT EMA
Sbjct: 204 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 263
Query: 210 KM 211
++
Sbjct: 264 EL 265
>gi|313123979|ref|YP_004034238.1| DNA-polymerase or DNA-primase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280542|gb|ADQ61261.1| Putative DNA-polymerase or DNA-primase [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
Length = 784
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 115 VREKVCDALSKVSGEADE---EIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKA 171
V E + A+ G+ DE + DE C+ +V+ + + F+ W R +G Y +KA
Sbjct: 687 VPESIKSAVEDYRGQMDEVQAFLEDETVPCEGAQVSSKVLYSKFQDWARRNGEYVFSHKA 746
Query: 172 VLGNLKDPKNPDFRR--NVHLGQVKPETIVGMTAKEM 206
+KD R V+LG ET++G TAKE+
Sbjct: 747 FSQKMKDKCKKKHTRVGTVYLGIRTTETVIGDTAKEV 783
>gi|195329544|ref|XP_002031470.1| GM24029 [Drosophila sechellia]
gi|194120413|gb|EDW42456.1| GM24029 [Drosophila sechellia]
Length = 2010
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 150 LESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAG 208
+E MF + R G YK KY++++ N+KD KN + QV+P +V MT +++A
Sbjct: 1318 VELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 1377
Query: 209 DKM 211
++
Sbjct: 1378 QEL 1380
>gi|109129943|ref|XP_001096593.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 1 [Macaca
mulatta]
gi|297303341|ref|XP_002806188.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 2 [Macaca
mulatta]
Length = 350
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + + YK ++ + NLK+PKN ++N+ G + P MT EMA
Sbjct: 204 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 263
Query: 210 KM 211
++
Sbjct: 264 EL 265
>gi|296234921|ref|XP_002807916.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
N-terminal and central domain-containing protein
[Callithrix jacchus]
Length = 382
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + + YK ++ + NLK+PKN ++N+ G + P M+ EMA
Sbjct: 236 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLKQNLFSGTMSPREFAEMSVMEMANK 295
Query: 210 KM 211
++
Sbjct: 296 EL 297
>gi|24646283|ref|NP_650193.1| protein partner of snf, isoform A [Drosophila melanogaster]
gi|7299622|gb|AAF54807.1| protein partner of snf, isoform A [Drosophila melanogaster]
Length = 2016
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 150 LESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAG 208
+E MF + R G YK KY++++ N+KD KN + QV+P +V MT +++A
Sbjct: 1320 VELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 1379
Query: 209 DKM 211
++
Sbjct: 1380 QEL 1382
>gi|386765657|ref|NP_001247075.1| protein partner of snf, isoform B [Drosophila melanogaster]
gi|383292673|gb|AFH06393.1| protein partner of snf, isoform B [Drosophila melanogaster]
Length = 2018
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 150 LESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAG 208
+E MF + R G YK KY++++ N+KD KN + QV+P +V MT +++A
Sbjct: 1322 VELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 1381
Query: 209 DKM 211
++
Sbjct: 1382 QEL 1384
>gi|297709429|ref|XP_002831433.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pongo abelii]
gi|297709431|ref|XP_002831434.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pongo abelii]
Length = 351
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
A +E +F + + YK ++ + NLK+PKN ++N+ G P MT E
Sbjct: 201 FAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTTSPREFAEMTVME 260
Query: 206 MAGDKM 211
MA ++
Sbjct: 261 MANKEL 266
>gi|82915268|ref|XP_729034.1| transcription elongation factor TFIIS.h [Plasmodium yoelii yoelii
17XNL]
gi|23485845|gb|EAA20599.1| transcription elongation factor TFIIS.h, putative [Plasmodium
yoelii yoelii]
Length = 366
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
Y ++ K++ NL D KNP+F ++ + T+ M +++MA D
Sbjct: 247 YNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASD 291
>gi|390597425|gb|EIN06825.1| transcription elongation factor [Punctularia strigosozonata
HHB-11173 SS5]
Length = 320
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTA 203
++ A +ES + ++ YK K ++ NLKD NP R V G++ E MT+
Sbjct: 185 LKRARGIESDVLSQFRTTGAEYKAKIRSFFVNLKDKNNPGLRAAVVSGELPVEKFAKMTS 244
Query: 204 KEMAGD 209
+MA +
Sbjct: 245 ADMASE 250
>gi|401395411|ref|XP_003879596.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
gi|325114003|emb|CBZ49561.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
Length = 418
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 142 DSVRVAIALESAMFEKW---DRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETI 198
++ RVA +E A+++++ + Y ++ K + N D KNPD V G PE +
Sbjct: 273 ETARVAAEIEKALWQEYCVKRKSTKEYNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQL 332
Query: 199 VGMTAKEMAGDK 210
M + ++A D+
Sbjct: 333 ATMNSADLASDE 344
>gi|61554104|gb|AAX46508.1| hypothetical protein MGC17403 [Bos taurus]
Length = 326
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+ +F + YK ++ + NLK+P+N ++N+ G + P MTA E
Sbjct: 227 LAQEIEAHVFALHPKNLQKYKTCIRSKVANLKNPRNSHLQQNLLSGTMSPREFAKMTAME 286
Query: 206 MAGDKM 211
MA ++
Sbjct: 287 MASQEL 292
>gi|40287880|gb|AAR84050.1| death inducer-obliterator-3 [Mus musculus]
Length = 2256
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 100 LSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWD 159
+S + + N R+ +R + + L K ++D I E ++A+ +E MF +
Sbjct: 656 VSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDYLIMTENEVG---KIALHIEKEMFNLFQ 712
Query: 160 RYDGPYKIKYKAVLGNLKDPKNPD-----FRRNVHLGQV---KPETIV 199
D +K KY++++ NLKDPKN R + L ++ KPE +V
Sbjct: 713 VTDNRFKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELV 760
>gi|340719413|ref|XP_003398148.1| PREDICTED: hypothetical protein LOC100650691 [Bombus terrestris]
Length = 2365
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 130 ADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVH 189
DEEI D +A +E +++ + YK KY++++ N+KD KN R +
Sbjct: 1294 TDEEIAD---------LAYNIELELYKYFKDTGAKYKAKYRSLVFNIKDTKNLTLFRKIA 1344
Query: 190 LGQVKPETIVGMTAKEMAGDKM 211
+ P+ +V ++ EMA ++
Sbjct: 1345 DRSLTPDAVVRLSPDEMASQEL 1366
>gi|410080934|ref|XP_003958047.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
gi|372464634|emb|CCF58912.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
Length = 323
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 89 VVTEKTNSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAI 148
V T+ NS ++ +++ N V+R + DAL+K S I ++++I
Sbjct: 141 VSTKPRNSKNDGVNTIVHENKLRDSVIRA-LYDALAKESQHPPNSI---------LKLSI 190
Query: 149 ALESAMFEKWDRY--DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEM 206
+E+ M + +D + YK KY+ + NL N D + + G + P +V KE+
Sbjct: 191 EIEAEMNKSYDSIANEKQYKEKYRIIYSNLISKNNSDLKFKITNGDITPVHLVNCDPKEL 250
Query: 207 AGDKM 211
A + +
Sbjct: 251 APEPL 255
>gi|350631410|gb|EHA19781.1| hypothetical protein ASPNIDRAFT_119842 [Aspergillus niger ATCC
1015]
Length = 891
Score = 37.4 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 145 RVAIALESAMFEKWDRYDG----PYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVG 200
+++++LESAM+E G PY+ + + ++ N+K KNP R + +G + P+ +
Sbjct: 332 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 389
Query: 201 MTAKEMAGDKM 211
M+ ++MA +++
Sbjct: 390 MSTQDMASEEL 400
>gi|297807181|ref|XP_002871474.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
gi|297317311|gb|EFH47733.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A +E +++ + + Y+ + +++L NLKD NPD R V ++ E + M
Sbjct: 200 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPDLRERVMSEEISAERLCSM 259
Query: 202 TAKEMAGDKM 211
TA+E+A ++
Sbjct: 260 TAEELASKEL 269
>gi|169618205|ref|XP_001802516.1| hypothetical protein SNOG_12292 [Phaeosphaeria nodorum SN15]
gi|111058985|gb|EAT80105.1| hypothetical protein SNOG_12292 [Phaeosphaeria nodorum SN15]
Length = 896
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 103 SMIRCNDCFREVVREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKWDRY 161
S+ F E +R+ + + S I D E R+A L +A E +
Sbjct: 305 SLPATQKPFAEKLRDVLSPLIKTASDARGYRIPDGETATSLGARLAFQLNTAAVEHYGEP 364
Query: 162 ---DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
D P I+ +A++ N K KNP + G +KP+ +V M +EMA +
Sbjct: 365 TAGDSPSSIRLRAIMFNAK--KNPILVDRLLSGSLKPQELVSMPTEEMASE 413
>gi|388854758|emb|CCF51651.1| related to transcription elongation factor TFIIS [Ustilago hordei]
Length = 317
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 113 EVVREKVCDALSKV---SGEADEEIRDEVNACDSVRVAIALESAMFEKWDR--YDGPYKI 167
E++ +KV +A K+ S E ++E R N A+A+E+A+ + Y+
Sbjct: 147 EILNDKVRNACLKLLYQSLEINKEQRG-FNDSQVFDAAVAVEAAILANQGKGSVTADYRN 205
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
K +++ N+KD NPD R V + + +V MT +E+A DK
Sbjct: 206 KVRSLSLNIKDKNNPDLRVRVIERDIPADKLVTMTNEELASDK 248
>gi|164448538|ref|NP_001019643.2| transcription elongation factor A N-terminal and central
domain-containing protein [Bos taurus]
gi|117306417|gb|AAI26749.1| LOC504389 protein [Bos taurus]
gi|296470464|tpg|DAA12579.1| TPA: TFIIS central domain-containing protein 1 [Bos taurus]
Length = 378
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
+A +E+ +F + YK ++ + NLK+P+N ++N+ G + P MTA E
Sbjct: 228 LAQEIEAHVFALHPKNLQKYKTCIRSKVANLKNPRNSHLQQNLLSGTMSPREFAKMTAME 287
Query: 206 MAGDKM 211
MA ++
Sbjct: 288 MASQEL 293
>gi|70953587|ref|XP_745885.1| transcription elongation factor s-ii [Plasmodium chabaudi chabaudi]
gi|56526345|emb|CAH78009.1| transcription elongation factor s-ii, putative [Plasmodium chabaudi
chabaudi]
Length = 364
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
Y ++ K++ NL D KNP+F ++ + T+ M +++MA D
Sbjct: 245 YNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASD 289
>gi|359444420|ref|ZP_09234210.1| peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas sp.
BSi20439]
gi|358041779|dbj|GAA70459.1| peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas sp.
BSi20439]
Length = 250
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 30 DERKGSYTIPGDIEPAKIEKVDKRTSE-ECQEISGVGIVKVQKVDQNATSLSSNVVRPES 88
D + G +T+ G I E +DK + C E+ VGI + Q D+N + N+V +S
Sbjct: 134 DTQNGGFTVFGQITAESQETLDKIVALVHCSEVPLVGITQAQCSDENVVISNENLVSIQS 193
Query: 89 VV--TEKTNSSDNLS 101
VV ++ NS+ NL+
Sbjct: 194 VVVLSDDPNSAQNLT 208
>gi|332223857|ref|XP_003261084.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Nomascus
leucogenys]
Length = 381
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + + YK ++ + NLK+PKN ++N+ G + P MT EMA
Sbjct: 235 IEEHVFTLYSKDIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 294
Query: 210 KM 211
++
Sbjct: 295 EL 296
>gi|224007775|ref|XP_002292847.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971709|gb|EED90043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 394
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 115 VREKVCDALSKVSGEADEEIRDEVN--ACDSVRVAIALE-SAMFEKWDR-YDGPYKIKYK 170
+R +C L + + ++ E+N A + ++ A E A + W R Y K +
Sbjct: 214 LRINICKKLHTIFRMSQSDLSKELNESAVKQLCLSRAGEVEAAVDTWSRGVKQTYNEKVR 273
Query: 171 AVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDK 210
++ NLK KN R V LGQV PE +V MT++E+ D+
Sbjct: 274 TLVFNLK--KNGPLRDRVILGQVTPERLVKMTSEELQTDE 311
>gi|388583993|gb|EIM24294.1| transcription elongation factor [Wallemia sebi CBS 633.66]
Length = 282
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 147 AIALESAMFEKWDRYDGP-YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
A+++ES + + + G YK K ++++ NLKD KNP R V G T M++ +
Sbjct: 149 ALSIESTVLDDNNGSTGEEYKKKVRSLMLNLKDKKNPSLREAVISGDTPAATFCRMSSAD 208
Query: 206 MAGD 209
MA +
Sbjct: 209 MASE 212
>gi|332223859|ref|XP_003261085.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Nomascus
leucogenys]
gi|441673101|ref|XP_004092410.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Nomascus leucogenys]
Length = 351
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + + YK ++ + NLK+PKN ++N+ G + P MT EMA
Sbjct: 205 IEEHVFTLYSKDIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 264
Query: 210 KM 211
++
Sbjct: 265 EL 266
>gi|367006041|ref|XP_003687752.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
gi|357526057|emb|CCE65318.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
Length = 303
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 46 KIEKVDKRTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSMI 105
K + K S+E Q+ + V + D++ S +N + + +T+KT ++ N
Sbjct: 84 KTQNSQKDLSKESQQANAVSLK-----DESGASNEAN--KQDKYITKKTRNTINDCVDTA 136
Query: 106 RCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPY 165
ND R+ V + + DAL+K S + I + V I L+ + + Y
Sbjct: 137 IYNDDLRDRVIKALYDALAKESEHPPQAILNTVKD-------IELQMHNLHNSETDEKAY 189
Query: 166 KIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+ +Y+ + N+ NPD + + G+V E + ++K++A + +
Sbjct: 190 RERYRIIYSNVISKNNPDLKHKITNGEVTAEFLSKCSSKDLAPEYL 235
>gi|254585479|ref|XP_002498307.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
gi|238941201|emb|CAR29374.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
Length = 298
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKI 167
N R++V + DAL+K S + D + I E D + YK
Sbjct: 134 NHKLRDMVIRALYDALAKESEHPPSSVLDSAKS-------IEEEMNKLNNCDENEKAYKD 186
Query: 168 KYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
KY+ + N+ NPD + + G V + +V KE+A + +
Sbjct: 187 KYRIIYSNIISKNNPDLKHKITNGDVTSQYLVSCDPKELAPEHL 230
>gi|426395182|ref|XP_004063854.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Gorilla gorilla
gorilla]
gi|426395184|ref|XP_004063855.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Gorilla gorilla
gorilla]
Length = 351
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
A +E +F + + YK ++ + NLK+PKN ++N+ G P MT E
Sbjct: 201 FAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNCHLQQNLLSGTTSPREFAEMTVME 260
Query: 206 MAGDKM 211
MA ++
Sbjct: 261 MANKEL 266
>gi|426395180|ref|XP_004063853.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Gorilla gorilla
gorilla]
Length = 381
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 150 LESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
+E +F + + YK ++ + NLK+PKN ++N+ G P MT EMA
Sbjct: 235 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNCHLQQNLLSGTTSPREFAEMTVMEMANK 294
Query: 210 KM 211
++
Sbjct: 295 EL 296
>gi|68072123|ref|XP_677975.1| transcription elongation factor [Plasmodium berghei strain ANKA]
gi|56498287|emb|CAH96309.1| transcription elongation factor s-ii, putative [Plasmodium berghei]
Length = 365
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
Y ++ K++ NL D KNP+F ++ + T+ M +++MA D
Sbjct: 246 YNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASD 290
>gi|67522641|ref|XP_659381.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|40744797|gb|EAA63953.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|259487122|tpe|CBF85543.1| TPA: PHD finger domain protein, putative (AFU_orthologue;
AFUA_6G09000) [Aspergillus nidulans FGSC A4]
Length = 889
Score = 37.0 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 145 RVAIALESAMFEKW-----DRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
++ I++E A+++ + YKI+ +A+L N+K KNP R + +G + P+ +
Sbjct: 323 QLGISVEEALYQNLMGGGGEATSEAYKIQLRAILFNVK--KNPSLRDRLLVGSLTPDALS 380
Query: 200 GMTAKEMAGDKM 211
M+++EMA +++
Sbjct: 381 RMSSQEMASEEL 392
>gi|237841743|ref|XP_002370169.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|95007190|emb|CAJ20411.1| transcription elongation factor s-II, putative [Toxoplasma gondii
RH]
gi|211967833|gb|EEB03029.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|221482635|gb|EEE20973.1| transcription elongation factor, putative [Toxoplasma gondii GT1]
gi|221503171|gb|EEE28877.1| transcription elongation factor, putative [Toxoplasma gondii VEG]
Length = 418
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 142 DSVRVAIALESAMFEKW---DRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETI 198
++ RVA +E A+++++ + Y ++ K + N D KNPD V G PE +
Sbjct: 273 ETARVAAEIEKALWQEYCVRRKSTKEYNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQL 332
Query: 199 VGMTAKEMAGDK 210
M++ ++A D+
Sbjct: 333 AIMSSADLASDE 344
>gi|17536493|ref|NP_495941.1| Protein T24H10.1 [Caenorhabditis elegans]
gi|1729914|sp|P52652.1|TFS2_CAEEL RecName: Full=Putative transcription elongation factor S-II;
AltName: Full=TFIIS
gi|3880168|emb|CAA90943.1| Protein T24H10.1 [Caenorhabditis elegans]
Length = 308
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A+ +E ++ + Y ++ + NL+D KN R NV G V+ E M
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKSYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 202 TAKEMA 207
T++EMA
Sbjct: 231 TSEEMA 236
>gi|71004188|ref|XP_756760.1| hypothetical protein UM00613.1 [Ustilago maydis 521]
gi|46095649|gb|EAK80882.1| hypothetical protein UM00613.1 [Ustilago maydis 521]
Length = 1137
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 165 YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
YK +++ L +LKD KN + GQ++P + MT +E+A D +
Sbjct: 436 YKDRFRTFLFSLKDAKNTTLHSRISSGQLQPSELGKMTNEELANDSI 482
>gi|429855994|gb|ELA30929.1| transcription elongation factor s-ii [Colletotrichum
gloeosporioides Nara gc5]
Length = 300
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 155 FEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEM 206
F + PYK K +++ NLK N + NV G++ P+ V MT +E+
Sbjct: 176 FSHFKGVGAPYKEKVRSLFSNLKVKTNKELGVNVMEGKITPDRFVAMTQEEL 227
>gi|298711796|emb|CBJ32824.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 371
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 72 VDQNATSLSSNVVRPESVVTEKTNSSD---NLSRSMIRCND---CFREVVREKVCDALSK 125
V + ATS +S V P S T +++S+ L I +D R +R K+ D L
Sbjct: 155 VGKTATSSTSEAV-PLSRQTSGSSTSELCTTLEVDSILSDDEPAPLRLKMRRKMFDTLLL 213
Query: 126 VSGEADEEIRDEVNACDSVRVAIALESAMFEK--WDRYDGPYKIKYKAVLGNLKDPKNPD 183
S E DE I + RVA +E AM E + Y K + ++ NLK KN
Sbjct: 214 GSSE-DERI-------PTARVAKGVECAMNENNPYLSKKASYLDKARQLVFNLK--KNDQ 263
Query: 184 FRRNVHLGQVKPETIVGMTAKE-MAGDK 210
R++V G V+P+ +V MT+ E MA DK
Sbjct: 264 LRQDVREGLVEPQRLVAMTSTELMAKDK 291
>gi|310789962|gb|EFQ25495.1| transcription elongation factor S-II [Glomerella graminicola
M1.001]
Length = 302
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D + A+A+E A + + Y+ K +++ NLK N NV G++ PE V M
Sbjct: 165 DVLTKAVAVEYAAYIHFKGVTKEYREKLRSLFSNLKVKSNRQLGINVMEGKITPERFVVM 224
Query: 202 TAKEMAGD 209
T +E+ D
Sbjct: 225 THEELKSD 232
>gi|351702318|gb|EHB05237.1| Transcription elongation factor A and central domain-containing
protein [Heterocephalus glaber]
Length = 353
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 136 DEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKP 195
D+ NA A +E +F + + YK ++ + NLK+P+N ++N+ + P
Sbjct: 193 DQANADLWQNFAREIEEHIFTLYSKNIKKYKTCIRSKVANLKNPRNCHLQQNLLSRTMSP 252
Query: 196 ETIVGMTAKEMAGDKM 211
+ MTA EMA ++
Sbjct: 253 KEFAEMTAMEMANKEL 268
>gi|19075622|ref|NP_588122.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59800464|sp|Q9Y7V2.3|BYE1_SCHPO RecName: Full=Transcription factor bye1
gi|4539285|emb|CAB39909.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe]
Length = 721
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 141 CDSVRVAIALESAMF----EKWDRYDGP---YKIKYKAVLGNLKDPKNPDFRRNVHLGQV 193
+S +A+ LE MF D P Y+ K++A+ NL D KNP FR V ++
Sbjct: 247 LNSTSLALQLEHIMFMVLSYTTDHSLTPNNKYREKFRALRFNLVDDKNPAFRARVLKNEI 306
Query: 194 KPETIVGMTAKEMAGDKM 211
+V ++++EMA +
Sbjct: 307 SFNDLVNLSSEEMANPDL 324
>gi|308510188|ref|XP_003117277.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
gi|308242191|gb|EFO86143.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
Length = 308
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A+ +E ++ + Y ++ + NL+D KN R NV G V+ E M
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 202 TAKEMAG 208
T++EMA
Sbjct: 231 TSEEMAS 237
>gi|406607842|emb|CCH40780.1| Transcription elongation factor [Wickerhamomyces ciferrii]
Length = 240
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 144 VRVAIALESAMFEKWDRYDGPYKIKY----KAVLGNLKDPKNPDFRRNVHLGQVKPETIV 199
+++A +E+ +F +++D KY +++ NL+ NP+ R ++ G + P+ +
Sbjct: 102 LKLAKEIEAEVFHA-EKFDTSSNTKYAQRLRSLTSNLRQKNNPELRNKINNGDLLPKVFI 160
Query: 200 GMTAKEMA 207
M+ +EMA
Sbjct: 161 NMSPREMA 168
>gi|224002418|ref|XP_002290881.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974303|gb|EED92633.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2469
Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 146 VAIALESAMFEKW----DRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
+A LE A+F+K+ D Y+ K +++ NL+DPKNP V GQ+ ++ M
Sbjct: 2066 LASDLEQAIFDKFRSPHDSISNEYRDKVRSLRFNLQDPKNPMLCARVLSGQLPISQLIVM 2125
Query: 202 TAKEMAGDKM 211
++ ++A ++
Sbjct: 2126 SSADLASKEL 2135
>gi|392559485|gb|EIW52669.1| transcription elongation factor [Trametes versicolor FP-101664 SS1]
Length = 306
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 21/144 (14%)
Query: 78 SLSSNVVRPESVVTEKTNSSD-----NLSRS-------MIRCNDCFREVVREKVCDALSK 125
S SN P + VT ++S N +RS + D R+ E + DAL
Sbjct: 102 SAGSNAATPSTPVTPTASTSGSGSKLNETRSAKTDGVKIEYTGDKTRDKCAELIYDALVF 161
Query: 126 VSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFR 185
SG E++ + A +E +F + YK K +++ NLKD NP R
Sbjct: 162 DSGAPSEQV---------MTRAKDIEKTVFNDNSGANAAYKAKIRSLFVNLKDKNNPGLR 212
Query: 186 RNVHLGQVKPETIVGMTAKEMAGD 209
+V G + M++++MA +
Sbjct: 213 ESVVSGDLAIAKFCRMSSQDMASE 236
>gi|260778319|ref|ZP_05887212.1| methyl-accepting chemotaxis protein [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606332|gb|EEX32617.1| methyl-accepting chemotaxis protein [Vibrio coralliilyticus ATCC
BAA-450]
Length = 640
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 45 AKIEKVDKRTSEECQEISGVGIVKVQKVDQNATSLSSNVVRPESVVTEKTNSSDNLSRSM 104
A I+ +D + SE +I G + Q +DQ AT++ E + + N+SDN+ ++
Sbjct: 374 ATIDHIDSQASEMKHQIQG----QEQNIDQVATAIHEMSASSEEIASNANNTSDNVQQAT 429
Query: 105 IR-------CNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSV 144
+ +D F E + L + S ++ E++ +++NA D+V
Sbjct: 430 VEVKHGLSSVSDTFSHT--EAMSRQLDQ-SSQSIEKLSNDINAIDTV 473
>gi|403215573|emb|CCK70072.1| hypothetical protein KNAG_0D03260 [Kazachstania naganishii CBS
8797]
Length = 309
Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 95 NSSDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM 154
NS ++ +++ N VVR + DAL+K S + ++ A+ +E M
Sbjct: 133 NSKNDGVDTVVHHNKLRDSVVRA-LYDALAKDSEHPPSSV---------LQTAVDIEKEM 182
Query: 155 FEKWDRY--DGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGDKM 211
+D + YK KY+ V N+ NPD + + G + P+ +V KE+A + +
Sbjct: 183 NALYDHVTSEKQYKEKYRIVYSNIISRNNPDLKFKITNGDLTPQFVVQCDPKELAPEHL 241
>gi|340914730|gb|EGS18071.1| putative transcription elongation factor [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 303
Score = 36.2 bits (82), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 147 AIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEM 206
A+ +E+A FE + Y+ K + ++ +LK N + V G++ P V MT KE+
Sbjct: 171 AMEVEAAAFEVYKGDTPEYRSKIRGLMTSLKRKDNAELGDRVMKGEITPHQFVKMTEKEL 230
Query: 207 AGD 209
A +
Sbjct: 231 ASE 233
>gi|452836512|gb|EME38456.1| hypothetical protein DOTSEDRAFT_75850 [Dothistroma septosporum
NZE10]
Length = 313
Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 85 RPESVVTEKTNS-SDNLSRSMIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDS 143
R +V EK N+ +DN++ + D R+ + + D ++ +S E+ + + D
Sbjct: 128 RKSTVDPEKRNTNTDNVNHKVT--GDAVRDGCLKLMYDGIAFMSEESPDTVMD------- 178
Query: 144 VRVAIALESAMFEKW-DRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMT 202
VA +E A FE + + YK K +++ NLK N R++V +++P V MT
Sbjct: 179 --VARKVELAAFEHFKSETNQDYKAKMRSLFQNLKMKNNTLLRKDVFTMKIEPTRFVTMT 236
Query: 203 AKEM 206
+ E+
Sbjct: 237 SDEL 240
>gi|268532566|ref|XP_002631411.1| Hypothetical protein CBG03263 [Caenorhabditis briggsae]
Length = 305
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 142 DSVRVAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGM 201
D +A+ +E ++ + Y ++ + NL+D KN R NV G V+ E M
Sbjct: 168 DPEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 227
Query: 202 TAKEMAGDKM 211
T++EMA ++
Sbjct: 228 TSEEMASPEI 237
>gi|315123355|ref|YP_004065361.1| putative peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas sp.
SM9913]
gi|315017115|gb|ADT70452.1| putative peptidyl-prolyl cis-trans isomerase [Pseudoalteromonas sp.
SM9913]
Length = 247
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 20 WRNMS-LEQMRDERKGSYTIPGDIEPAKIEKVDKRTSE-ECQEISGVGIVKVQKVDQNAT 77
+ NMS Q D + G +T+ G I E +DK + C E+ VGI K Q D+N
Sbjct: 120 FFNMSDNSQNLDLQNGGFTVFGQITAQSQETLDKIAALVHCAEVPLVGITKEQCSDENVV 179
Query: 78 SLSSNVVRPESVVT--EKTNSSDNLS 101
+ N+V ++VV + NS+ NL+
Sbjct: 180 ISNQNLVSIQTVVVLDDDPNSAQNLT 205
>gi|359437926|ref|ZP_09227975.1| peptidyl-prolyl cis-trans isomerase A [Pseudoalteromonas sp.
BSi20311]
gi|358027413|dbj|GAA64224.1| peptidyl-prolyl cis-trans isomerase A [Pseudoalteromonas sp.
BSi20311]
Length = 247
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 20 WRNMS-LEQMRDERKGSYTIPGDIEPAKIEKVDKRTSE-ECQEISGVGIVKVQKVDQNAT 77
+ NMS Q D + G +T+ G I E +DK + C E+ VGI K Q D+N
Sbjct: 120 FFNMSDNSQNLDLQNGGFTVFGQITAQSQETLDKIAALVHCAEVPLVGITKEQCSDENVV 179
Query: 78 SLSSNVVRPESVVT--EKTNSSDNLS 101
+ N+V ++VV + NS+ NL+
Sbjct: 180 ISNQNLVSIQTVVVLDDDPNSAQNLT 205
>gi|432109698|gb|ELK33774.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Myotis davidii]
Length = 352
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 146 VAIALESAMFEKWDRYDGPYKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKE 205
A +E +F + + YK ++ + NLK+P+N +RN+ G + P MT +
Sbjct: 202 FAREIEEHVFTLYSKNLKKYKTCIRSKVANLKNPRNSHLQRNLLSGTMSPREFAEMTVMD 261
Query: 206 MAGDKM 211
MA ++
Sbjct: 262 MASKEL 267
>gi|366987517|ref|XP_003673525.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
gi|342299388|emb|CCC67142.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
Length = 307
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 19/108 (17%)
Query: 108 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWDRYDGP--- 164
ND R+ V + + DAL+K S I + ++E+ M+ + + P
Sbjct: 143 NDKLRDSVVKALYDALAKESEHPPASI---------LHTVKSIENEMY----KLNNPSIN 189
Query: 165 ---YKIKYKAVLGNLKDPKNPDFRRNVHLGQVKPETIVGMTAKEMAGD 209
YK KY+ + N+ NPD + + + P+ +V KE+A +
Sbjct: 190 ERQYKEKYRIIYSNIISKNNPDLKNKITNNDITPDYLVNCDPKELAPE 237
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.129 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,097,034,949
Number of Sequences: 23463169
Number of extensions: 115077269
Number of successful extensions: 254349
Number of sequences better than 100.0: 813
Number of HSP's better than 100.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 253500
Number of HSP's gapped (non-prelim): 899
length of query: 217
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 80
effective length of database: 9,144,741,214
effective search space: 731579297120
effective search space used: 731579297120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 74 (33.1 bits)