BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038235
(514 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O70279|DGC14_MOUSE Protein DGCR14 OS=Mus musculus GN=Dgcr14 PE=2 SV=2
Length = 479
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 214/460 (46%), Gaps = 74/460 (16%)
Query: 45 KKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERR 104
+ R +VLDE+ Y+ ++++I+RD+FPD+ KL+ + E+L+A GD ++R +K
Sbjct: 35 RSRQRVLDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKFG--- 91
Query: 105 GKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEV 164
++ GKI + P T A TP +V+ + +G + +G RD D
Sbjct: 92 -------SALGKISREPPPPYVTPATFETP----EVHPGSAVLGNKPRPQG--RDLDDGE 138
Query: 165 DVSMR-------LDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEG----EKRDNNN 213
LD FL ++TSEDN SF +I+E K R+ +L + EKR +N
Sbjct: 139 AGEEEEKEPLPSLDVFLSQYTSEDNASFQEIMEVAKEKSHARHAWLYQAEEEFEKRQKDN 198
Query: 214 L-IEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAVRLKGL 272
L + + I + +E WKY AKN LMY+P + +EEQ +
Sbjct: 199 LELPSAEHQAIESSQ-------AGVETWKYKAKNSLMYYPEG-----VPDEEQLFK---K 243
Query: 273 TKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYDLEDMRKT 332
++I NTRF + D P A + G K+ ++ +
Sbjct: 244 PRQIVHKNTRF---LRD--PFSQALSRSQLQQAAALNAQHKQGKVGPDGKELIPQESPRV 298
Query: 333 PNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTP-IDIGGSG 391
G+ FV TPSPAPG +ESP +TWGE+E TPLR+E ++P +D
Sbjct: 299 -------------GGFGFVATPSPAPGVNESPLMTWGEVENTPLRVEGSESPYVD---RT 342
Query: 392 DGPHFKIPSAPTRDVMAHELSREASRKLKERSKMFQKPPLPSPYRAGSASPSGKLLSPAA 451
GP FKI R+ + +++ EA+ K R+K Q+ S +P G LSPA
Sbjct: 343 PGPTFKILEPGRRERLGLKMANEAA--AKNRAKK-QEALRRVTENLASLTPKG--LSPAM 397
Query: 452 QKFMRNAMAKSSSS-VDDALRASYRGS---SPVTGTPKGG 487
++ +++++S D ALRASY S S TP GG
Sbjct: 398 SPALQRLVSRTASKYTDRALRASYTPSPARSSHLKTPAGG 437
>sp|Q96DF8|DGC14_HUMAN Protein DGCR14 OS=Homo sapiens GN=DGCR14 PE=1 SV=1
Length = 476
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 212/454 (46%), Gaps = 76/454 (16%)
Query: 43 PPKKR-----------AKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPV 91
PP+KR +VLDE+ Y+ ++++I+RD+FPD+ KL+ + E+L+A GD
Sbjct: 19 PPRKREAGEAGAATSKQRVLDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLEAEENGDLE 78
Query: 92 QIRDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVEL 151
++R +K ++ GK+ + P T A TP +V+ T VG +
Sbjct: 79 RMRQIAIKFG----------SALGKMSREPPPPYVTPATFETP----EVHAGTGVVGNKP 124
Query: 152 SGEGVCRDGTDEVDVSMR-----LDEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEG 206
G + + + + LD FL ++TSEDN SF +I+E + + R+ +L +
Sbjct: 125 RPRGRGLEDGEAGEEEEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKERSRARHAWLYQA 184
Query: 207 ----EKRDNNNLIEDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTE 262
EKR +NL + + + S +E WKY AKN LMY+P + +
Sbjct: 185 EEEFEKRQKDNLELPSAEHQAIESSQAS------VETWKYKAKNSLMYYPEG-----VPD 233
Query: 263 EEQAVRLKGLTKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMK 322
EEQ L +++ NTRF + D P A + G K
Sbjct: 234 EEQ---LFKKPRQVVHKNTRF---LRD--PFSQALSRCQLQQAAALNAQHKQGKVGPDGK 285
Query: 323 KYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETED 382
+ ++ + G+ FV TPSPAPG +ESP +TWGE+E TPLR+E +
Sbjct: 286 ELIPQESPRV-------------GGFGFVATPSPAPGVNESPMMTWGEVENTPLRVEGSE 332
Query: 383 TP-IDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSKMFQKPPLPSPYRAGSAS 441
TP +D GP FKI R+ + +++ EA+ K R+K Q+ S +
Sbjct: 333 TPYVD---RTPGPAFKILEPGRRERLGLKMANEAA--AKNRAKK-QEALRRVTENLASLT 386
Query: 442 PSGKLLSPAAQKFMRNAMAKSSSS-VDDALRASY 474
P G LSPA ++ +++++S D ALRASY
Sbjct: 387 PKG--LSPAMSPALQRLVSRTASKYTDRALRASY 418
>sp|O44424|DGC14_DROME Protein DGCR14 homolog OS=Drosophila melanogaster GN=Es2 PE=1 SV=2
Length = 501
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 199/448 (44%), Gaps = 81/448 (18%)
Query: 29 LTNVNNSASATQKVPP-----KKRAKVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQ 83
+ V NSA A K P K + K+L E+ Y+ + II+RD+FPDL +LR + ++L
Sbjct: 24 VARVQNSALAEFKKPTAMVRHKNKPKILTEEKYIEEMSKIIQRDFFPDLERLRAQNDYLD 83
Query: 84 ATRTGDPVQIRDAQLKIMERRGKKVISLNSDGKIRTQTETPGSTFARNFTPFDEFDVNIT 143
A D VQ+ + I ER IS R +TF TP + +
Sbjct: 84 AESRRDFVQMAE----IRERYSLGRISGTGRSTSRRNNAMSPATFE---TPVSQAKCS-N 135
Query: 144 TPKVGVELSGEGVCRDGTDEVDVSMR-------LDEFLRKHTSEDNDSFSKILEKVNRKR 196
TP + DG+++ D R LD FL+K+TSEDN SF +I+E K
Sbjct: 136 TPLPNSRATDTPFSTDGSEKSDAEGRDTTAKLSLDAFLQKYTSEDNQSFQEIIETAEAKL 195
Query: 197 KERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTSYQPPSTL---EGWKYTAKNLLMYHPA 253
+++Y L EK E +++ + T ++ P L E W YT N +MY P
Sbjct: 196 RQKYAVLYNHEKLS----AEQLQRALMLPSIETQFEEPDPLRKIETWNYTNMNSIMYVP- 250
Query: 254 DCGEAPLTEEEQAVRLKGLTKEINKTNTRF----HGKIMDSRPNDDGTVEVLYTPVAGTT 309
D E TEEE+ V+L + I TR + MD++ +D EV G T
Sbjct: 251 DGVE--YTEEER-VQLAERKQSIQHNATRLPDEAKHREMDTKKLND---EVPQNGAGGAT 304
Query: 310 PGPVFDRDGDKMKKYDLEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWG 369
P K++ +DL +++PSP PG SP +TWG
Sbjct: 305 ATP-------KVRGFDL------------------------LRSPSPRPGEAFSPIMTWG 333
Query: 370 EIEGTPLRLETEDTPIDIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSKMF--- 426
EI+GTP RL+ DTP+ GP F+I R+ +A L+ S +++ + +M
Sbjct: 334 EIDGTPFRLDGGDTPLR---PTQGPSFRINENSRRENIAIALAERVSERMRNQKQMALDT 390
Query: 427 QKPPLPSPY------RAGSASPSGKLLS 448
+ + SP R S SP+ +LL+
Sbjct: 391 ARRNIGSPLIRTNMERLASMSPAAQLLA 418
>sp|P34420|DGC14_CAEEL ES2 similar protein 2 OS=Caenorhabditis elegans GN=ess-2 PE=3 SV=2
Length = 531
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 192/435 (44%), Gaps = 66/435 (15%)
Query: 49 KVLDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKV 108
+V+ E+ Y++ ++ IIE+DYFP L K++ + E+L+A D +I++ Q+K
Sbjct: 40 QVVPEEKYIAGLDKIIEKDYFPHLKKMQAQKEYLEAVANKDINKIKELQMKFCS-----T 94
Query: 109 ISLNSDGKIRTQTETPGSTFARNFTPFD------------EFDVNITTPKVGVELSGEGV 156
S+ +D RT T +T A + + FD + +P G+
Sbjct: 95 GSVRTDRSFRTPITTRSTTEAPDVSSFDADTPGPSSASTSSAHDWMQSPMPFANEEGDNE 154
Query: 157 CRDGTDEVDVSMRLDEFLRKHTSEDNDSFSKILEKVNRKRKE-RYQFLLEGEKRDNNNLI 215
+ + L +L K+TSEDN SF + L KV R+R++ R ++ + E+ N NL+
Sbjct: 155 ALNRKRKKKKEETLTSYLNKYTSEDNASFEE-LAKVMREREDARRPWVYKAEEEHNKNLV 213
Query: 216 --------EDVKKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAV 267
DV+ + P ++ W Y A N ++++P A LT E A
Sbjct: 214 TRQAIAAEADVQL-ALKHAVDADDNRPLNVDNWAYKAWNTVLFNP---DGAALTPAEIAD 269
Query: 268 RLKGLTKEINKTNTRF--HGKIMDSRPNDDGTVEVLYTPVAGTTPGPVFDRDGDKMKKYD 325
+ EINK TRF GK+ +P+D+ + K D
Sbjct: 270 AARKQQTEINKRGTRFPDSGKL---KPSDEAMTRAAVSHALANA------------GKVD 314
Query: 326 LEDMRKTPNRFYVESGKKAENGYSFVKTPSPAPGADESPFITWGEIEGTPLRLETEDTPI 385
TP N + ++TP+P P +SP +TWGEI+GTP RL+ D
Sbjct: 315 FLGNEVTP-----------ANSFKLLETPNPNPDDMDSPLMTWGEIDGTPFRLDAPDV-T 362
Query: 386 DIGGSGDGPHFKIPSAPTRDVMAHELSREASRKLKERSKMFQKPPLPSPYRA----GSAS 441
+ G P FKIP P R+ +A ++ + K +++ K+ + + + GS
Sbjct: 363 EHSLPGAAPVFKIPEVPYREKIAQSMNDSIAAKYRDKRKVAMRAAEGAHFSRTPGFGSKR 422
Query: 442 PSGKL--LSPAAQKF 454
S KL LSPAAQK
Sbjct: 423 VSDKLAQLSPAAQKL 437
>sp|O59793|BIS1_SCHPO Stress response protein bis1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bis1 PE=1 SV=1
Length = 384
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 47/220 (21%)
Query: 51 LDEDTYVSAIESIIERDYFPDLSKLRDRYEWLQATRTGDPVQIRDAQLKIMERRGKKVIS 110
L+ED Y+ + II++ YFPDL KL+ + + V DAQ + + + K +I+
Sbjct: 30 LEEDDYIEGLSYIIQQQYFPDLPKLK-----AEVVLESEEVGSFDAQNESRDEKLKYLIA 84
Query: 111 LNSDGKIRTQTETPGSTFARNFTPFDEFDVNITTPKVGVELSGEGVCRDGTDEVDVSMRL 170
NS+ +R + + L+ + + D + + +
Sbjct: 85 KNSEDPLRKRLPS---------------------------LAIHEITKAQLDGENKPISV 117
Query: 171 DEFLRKHTSEDNDSFSKILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDGYGTS 230
+ K TSEDN SF +++E +R R E+++ + +N I+ + GY S
Sbjct: 118 ASYQNKFTSEDNASFGELMEDESRLRAEQHKRRFGVHSQQPSNSIQTI-------GYSNS 170
Query: 231 YQPPS--------TLEGWKYTAKNLLMYHPADCGEAPLTE 262
S +++ W Y KN LMY P + L++
Sbjct: 171 DAIKSIAWKEKDKSIKTWNYQPKNALMYTPETNHSSSLSQ 210
>sp|Q92LF6|P4H_RHIME L-proline cis-4-hydroxylase OS=Rhizobium meliloti (strain 1021)
GN=R03107 PE=1 SV=1
Length = 280
Score = 35.8 bits (81), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 22 SSFPESYLTNVNNSASATQKVPPKKR------------AKVLDEDTYVSAIESIIERDYF 69
++FPES+L NV + V P+K + ++ E Y I SI+ + +F
Sbjct: 174 TAFPESFLRNVEQPVTTRDMVDPRKELTDEVIEGILGFSIIISEANY-REIVSILAKLHF 232
Query: 70 PDLSKLRDRYEWLQ--ATRTGDPVQI 93
+ R Y+WL+ R GDP I
Sbjct: 233 FYKADCRSMYDWLKEICKRRGDPALI 258
>sp|P04809|HSP83_DROPS Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura
GN=Hsp83 PE=3 SV=2
Length = 717
Score = 35.8 bits (81), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 169 RLDEFLRKHTSEDNDSFSKILEKVNR-KRKERYQFLLEGEKRD---NNNLIEDVKKDRIT 224
+L +FLR HTS D F + + V+R K +++ + + GE +D N+ +E VK
Sbjct: 443 KLADFLRFHTSASGDDFCSLSDYVSRMKENQKHVYFITGESKDQVSNSAFVERVKARGFE 502
Query: 225 DGYGTSYQPPSTLEGWK-YTAKNLL------MYHPADCGEAPLTEEEQAVRLKGLTK 274
Y T ++ K Y K L+ + P D E EE++A + +GL K
Sbjct: 503 VVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDEAEKKKREEDKA-KFEGLCK 558
>sp|Q3MHI7|RF1M_BOVIN Peptide chain release factor 1, mitochondrial OS=Bos taurus
GN=MTRF1 PE=2 SV=1
Length = 447
Score = 35.8 bits (81), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 188 ILEKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDG---------YGTSYQPPSTLE 238
I +K+N E +Q LL EK D N++I +V R T G YQ S+ +
Sbjct: 161 IAQKINMLYSELFQSLLPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYK 220
Query: 239 GWKYTAKNLLMYHPADCG 256
W++ LL Y PAD G
Sbjct: 221 HWRF---ELLNYTPADYG 235
>sp|O02192|HSP83_DROAV Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1
Length = 716
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 169 RLDEFLRKHTSEDNDSFSKILEKVNR-KRKERYQFLLEGEKRD---NNNLIEDVKKDRIT 224
+L +FLR HTS D F + + V+R K +++ + + GE +D N+ +E VK
Sbjct: 442 KLADFLRFHTSASGDDFCSLSDYVSRMKENQKHVYFITGESKDQVSNSAFVERVKARGFE 501
Query: 225 DGYGTSYQPPSTLEGWK-YTAKNLL------MYHPADCGEAPLTEEEQAVRLKGLTKEIN 277
Y T ++ K Y K L+ + P D E EE++A + + L K +N
Sbjct: 502 VVYMTEPIDEYVIQHLKEYKGKQLVSVTKEGLELPEDDAEKKKREEDKA-KFESLCKLMN 560
>sp|P53797|PSY_NARPS Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus
GN=PSY PE=2 SV=1
Length = 423
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 219 KKDRITDGYGTSYQPPSTLEGWKYTAKNLLMYHPADCGEAPLTEEEQAV---------RL 269
+ D + DG+ S+ PS L+ W+ ++L P D +A L++ +
Sbjct: 167 RTDELVDGHNASHITPSALDRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQPFMDMV 226
Query: 270 KGLTKEINKTNTRFHGKIMDSRPNDDGTVEVLYTPVAGTTP 310
+G+ ++ K+ + ++ GTV ++ PV G P
Sbjct: 227 EGMRMDLKKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAP 267
>sp|P02828|HSP83_DROME Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1
Length = 717
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 169 RLDEFLRKHTSEDNDSFSKILEKVNR-KRKERYQFLLEGEKRD---NNNLIEDVK 219
+L +FLR HTS D F + + V+R K +++ + + GE +D N+ +E VK
Sbjct: 443 KLADFLRFHTSASGDDFCSLADYVSRMKDNQKHVYFITGESKDQVSNSAFVERVK 497
>sp|O75570|RF1M_HUMAN Peptide chain release factor 1, mitochondrial OS=Homo sapiens
GN=MTRF1 PE=1 SV=2
Length = 445
Score = 33.1 bits (74), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 190 EKVNRKRKERYQFLLEGEKRDNNNLIEDVKKDRITDG---------YGTSYQPPSTLEGW 240
+K+N E +Q L+ EK D N++I +V R T G YQ S + W
Sbjct: 161 QKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHW 220
Query: 241 KYTAKNLLMYHPADCG 256
++ LL Y PAD G
Sbjct: 221 QF---ELLNYTPADYG 233
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 211,899,464
Number of Sequences: 539616
Number of extensions: 10044405
Number of successful extensions: 25440
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 25356
Number of HSP's gapped (non-prelim): 136
length of query: 514
length of database: 191,569,459
effective HSP length: 122
effective length of query: 392
effective length of database: 125,736,307
effective search space: 49288632344
effective search space used: 49288632344
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)